Citrus Sinensis ID: 022960
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 289 | 2.2.26 [Sep-21-2011] | |||||||
| Q07379 | 328 | Putative uncharacterized | yes | no | 0.698 | 0.615 | 0.278 | 3e-09 |
| >sp|Q07379|YD057_YEAST Putative uncharacterized protein YDL057W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL057W PE=4 SV=1 | Back alignment and function desciption |
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Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 46 QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105
+L ++ HG QS K+ I LA L G R DF G G+S + G R A+DL
Sbjct: 68 KLALLLHGSQSHKNAIYQTLLAKRLAEFGYWVLRIDFRGQGDSSDNCDPGLGRTLAQDLE 127
Query: 106 AI-------------VQDFCAKGRVITAIIGHSKGGNAVL-----LYASKYNDISIVINI 147
+ VQ + + ++ HS+G A+ L+A++ S +IN
Sbjct: 128 DLSTVYQTVSDRSLRVQLYKTSTISLDVVVAHSRGSLAMFKFCLKLHAAESPLPSHLINC 187
Query: 148 SGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAAC-- 205
+GR++ RG+ R + + GF + G EY+ L + S I C
Sbjct: 188 AGRYD-GRGLIERCTRLHPHWQAEGGFWANGPRNG--EYKDFWIPLSETYS--IAGVCVP 242
Query: 206 --HMICQDCRVLTIHGTKDKMVPAEDALEFDK-FIPNHKLHIIEGADHEF 252
I Q C V++ +G D +VP A + + F H L +IE ADH +
Sbjct: 243 EFATIPQTCSVMSCYGMCDHIVPISAASNYARLFEGRHSLKLIENADHNY 292
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 289 | ||||||
| 224088824 | 287 | predicted protein [Populus trichocarpa] | 0.968 | 0.975 | 0.705 | 1e-112 | |
| 296081650 | 1053 | unnamed protein product [Vitis vinifera] | 0.920 | 0.252 | 0.704 | 1e-110 | |
| 225429528 | 295 | PREDICTED: uncharacterized protein LOC10 | 0.982 | 0.962 | 0.656 | 1e-109 | |
| 255550760 | 284 | valacyclovir hydrolase, putative [Ricinu | 0.882 | 0.897 | 0.733 | 1e-108 | |
| 356552362 | 282 | PREDICTED: putative uncharacterized prot | 0.903 | 0.925 | 0.712 | 1e-105 | |
| 357437413 | 279 | hypothetical protein MTR_1g016050 [Medic | 0.934 | 0.967 | 0.676 | 1e-103 | |
| 356562183 | 281 | PREDICTED: putative uncharacterized prot | 0.896 | 0.921 | 0.694 | 1e-101 | |
| 449447124 | 275 | PREDICTED: uncharacterized protein LOC10 | 0.892 | 0.938 | 0.689 | 1e-100 | |
| 449447122 | 284 | PREDICTED: uncharacterized protein LOC10 | 0.903 | 0.919 | 0.685 | 1e-100 | |
| 225444897 | 319 | PREDICTED: uncharacterized protein LOC10 | 0.896 | 0.811 | 0.656 | 2e-98 |
| >gi|224088824|ref|XP_002308555.1| predicted protein [Populus trichocarpa] gi|222854531|gb|EEE92078.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/282 (70%), Positives = 235/282 (83%), Gaps = 2/282 (0%)
Query: 10 YRQGFQQDPVVQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAA 69
Y F VQ+RRVVI N+H EKL GILHETGSKQLVIVCHGFQS+K+RIPMVNLAAA
Sbjct: 6 YECVFDLLAAVQQRRVVIENNHDEKLSGILHETGSKQLVIVCHGFQSSKERIPMVNLAAA 65
Query: 70 LEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGN 129
LE+EGISAFRFDF+GNGESEGSF YGNYRREAEDLRA+VQ F + RVI+A+IGHSKGGN
Sbjct: 66 LEKEGISAFRFDFAGNGESEGSFQYGNYRREAEDLRAVVQHFRRENRVISAVIGHSKGGN 125
Query: 130 AVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVT 189
VLLYASKYND+ V+NISGRFNL++G+EGRLG +L R+KQ+G+IDV N+KGK EYRVT
Sbjct: 126 VVLLYASKYNDVHAVVNISGRFNLEKGMEGRLGKDFLLRLKQHGYIDVFNRKGKFEYRVT 185
Query: 190 QESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGAD 249
+ESL DRL+TDIHA C +I Q+CRVLT+HG+ DK VPAEDALEF KFIPNHKLHII+GA+
Sbjct: 186 EESLKDRLTTDIHAVCLLIQQECRVLTVHGSMDKFVPAEDALEFAKFIPNHKLHIIKGAN 245
Query: 250 HEFTSHQDELASLVIQFIKANY--QKDGPTSKRADGTIDSRM 289
HE+TSHQ EL S+V+ F++ N+ +KD P D SR+
Sbjct: 246 HEYTSHQGELTSVVLDFLRENFNAEKDMPKLPLKDHPFRSRL 287
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296081650|emb|CBI20655.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 231/271 (85%), Gaps = 5/271 (1%)
Query: 1 MSVTRPTQSY--RQGFQQDPVVQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTK 58
MSVTRP+ ++ R G PV++++RVVI N HGEKLVGI HE GSK+LVI+CHGF+S+K
Sbjct: 736 MSVTRPSPTHLERVG---PPVIKQQRVVIQNQHGEKLVGISHEIGSKELVILCHGFRSSK 792
Query: 59 DRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVI 118
+RIPMVNLAAAL +EGISAFRFDF+GNGESEGSF YGNYRREA+DLRA+VQ F + RVI
Sbjct: 793 ERIPMVNLAAALGKEGISAFRFDFAGNGESEGSFQYGNYRREADDLRAVVQHFYGEKRVI 852
Query: 119 TAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVR 178
A++GHSKGGN VLLYASKYND+ ++NISGRF L+RGI+GRLG +LQRIKQNGFIDV+
Sbjct: 853 IALVGHSKGGNVVLLYASKYNDVHTIVNISGRFYLERGIKGRLGQDFLQRIKQNGFIDVK 912
Query: 179 NKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP 238
NK GK +YRVT+ESL+DRL+TD HA C +I +DCRV T+HG+ D+MVP EDAL F IP
Sbjct: 913 NKGGKFQYRVTEESLIDRLTTDTHATCLLIQKDCRVFTVHGSCDEMVPVEDALAFANIIP 972
Query: 239 NHKLHIIEGADHEFTSHQDELASLVIQFIKA 269
NHKLHIIEGADHEFTSHQ ELAS+V+ F+++
Sbjct: 973 NHKLHIIEGADHEFTSHQGELASVVLDFVRS 1003
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429528|ref|XP_002279053.1| PREDICTED: uncharacterized protein LOC100247545 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/300 (65%), Positives = 240/300 (80%), Gaps = 16/300 (5%)
Query: 1 MSVTRPTQSYRQGFQQDPVVQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDR 60
MSVTRP+ ++ + PV++++RVVI N HGEKLVGI HE GSK+LVI+CHGF+S+K+R
Sbjct: 1 MSVTRPSPTHLERVG-PPVIKQQRVVIQNQHGEKLVGISHEIGSKELVILCHGFRSSKER 59
Query: 61 IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITA 120
IPMVNLAAAL +EGISAFRFDF+GNGESEGSF YGNYRREA+DLRA+VQ F + RVI A
Sbjct: 60 IPMVNLAAALGKEGISAFRFDFAGNGESEGSFQYGNYRREADDLRAVVQHFYGEKRVIIA 119
Query: 121 IIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNK 180
++GHSKGGN VLLYASKYND+ ++NISGRF L+RGI+GRLG +LQRIKQNGFIDV+NK
Sbjct: 120 LVGHSKGGNVVLLYASKYNDVHTIVNISGRFYLERGIKGRLGQDFLQRIKQNGFIDVKNK 179
Query: 181 KGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH 240
GK +YRVT+ESL+DRL+TD HA C +I +DCRV T+HG+ D+MVP EDAL F IPNH
Sbjct: 180 GGKFQYRVTEESLIDRLTTDTHATCLLIQKDCRVFTVHGSCDEMVPVEDALAFANIIPNH 239
Query: 241 KLHIIEGADHEFTSHQDELASLVIQFIKANYQKDGPTSK-----------RADGTIDSRM 289
KLHIIEGADHEFTSHQ ELAS+V+ F+++ P SK RAD + SR+
Sbjct: 240 KLHIIEGADHEFTSHQGELASVVLDFVRSY----PPCSKGISEQLPRSCIRADNSTRSRL 295
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255550760|ref|XP_002516428.1| valacyclovir hydrolase, putative [Ricinus communis] gi|223544248|gb|EEF45769.1| valacyclovir hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/255 (73%), Positives = 223/255 (87%)
Query: 16 QDPVVQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGI 75
Q+P Q +RV+I N HGEKLVGILHETGSKQLVIVCHGFQS+K+RIPMV +A L+ EGI
Sbjct: 9 QNPDSQLKRVIIENKHGEKLVGILHETGSKQLVIVCHGFQSSKERIPMVKIAGVLQNEGI 68
Query: 76 SAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYA 135
SAFRFDF+GNG+SEGSF YGNYRRE +DLR++VQ F + VI+AIIGHSKGGN VLLYA
Sbjct: 69 SAFRFDFAGNGDSEGSFQYGNYRRECDDLRSVVQHFREQKLVISAIIGHSKGGNVVLLYA 128
Query: 136 SKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMD 195
SKYND+ +V+NISGRFNLKRG+EGRLG +LQRIK+NGFIDV+N+KGK EYRVT+ESLMD
Sbjct: 129 SKYNDVYMVVNISGRFNLKRGMEGRLGKDFLQRIKRNGFIDVKNRKGKFEYRVTEESLMD 188
Query: 196 RLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSH 255
RL+TD HAAC +I +CRVLT+HG+ DKMVPAEDA EF KFI NH+L IIEGADHEFTSH
Sbjct: 189 RLTTDPHAACLLIHPECRVLTVHGSMDKMVPAEDAHEFAKFIRNHRLEIIEGADHEFTSH 248
Query: 256 QDELASLVIQFIKAN 270
QD+LAS+V+ +++ +
Sbjct: 249 QDKLASIVLDYLRED 263
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552362|ref|XP_003544537.1| PREDICTED: putative uncharacterized protein YDL057W-like [Glycine max] | Back alignment and taxonomy information |
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Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/261 (71%), Positives = 217/261 (83%)
Query: 21 QRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRF 80
+ R+V I N+HGE LVGILH S LVIVCHGFQS+K+RIPMVNLAAAL ++G SAFRF
Sbjct: 9 RERKVTIRNNHGENLVGILHNAASISLVIVCHGFQSSKERIPMVNLAAALGKDGFSAFRF 68
Query: 81 DFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND 140
DF+GNGESEGSF YGNY REAEDLRA+VQ FC + I AI+GHSKGGN VLLYASKY D
Sbjct: 69 DFAGNGESEGSFQYGNYYREAEDLRAVVQHFCEQKYAIKAIVGHSKGGNVVLLYASKYKD 128
Query: 141 ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTD 200
I IV+NISGRFNL RG+EGRLG ++QRIKQ+G+IDV+NK+GK+ YRVT+ESLMDRLST
Sbjct: 129 IHIVVNISGRFNLARGMEGRLGKKFIQRIKQDGYIDVKNKRGKIMYRVTEESLMDRLSTI 188
Query: 201 IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELA 260
H AC +I QDC VLTIHG+ D++VPAEDALEF KFI NH+L IEGADHE+T HQDEL
Sbjct: 189 THLACLLIPQDCSVLTIHGSMDEIVPAEDALEFAKFISNHELCFIEGADHEYTYHQDELT 248
Query: 261 SLVIQFIKANYQKDGPTSKRA 281
SLV++FIK + KD TSK+A
Sbjct: 249 SLVLEFIKIHIDKDKDTSKQA 269
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357437413|ref|XP_003588982.1| hypothetical protein MTR_1g016050 [Medicago truncatula] gi|355478030|gb|AES59233.1| hypothetical protein MTR_1g016050 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/275 (67%), Positives = 218/275 (79%), Gaps = 5/275 (1%)
Query: 20 VQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFR 79
V +RR+ + N HGE LVGILH S LVIVCHGFQS+K+RIPMVN+AAALE+ GISAFR
Sbjct: 5 VTQRRITVRNHHGENLVGILHNAFSTALVIVCHGFQSSKERIPMVNIAAALEKNGISAFR 64
Query: 80 FDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYN 139
FDF+GNGESEGSF YGNY RE EDLRAIVQ F + +TAI+GHSKGGN VLLYASKY
Sbjct: 65 FDFAGNGESEGSFQYGNYYREVEDLRAIVQHFREEKYAVTAIVGHSKGGNVVLLYASKYK 124
Query: 140 DISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST 199
DI V+NISGRFNL RG+E RLG ++QRIKQ+GFIDV+NK+GK+ +RVT+ESLMDRL+T
Sbjct: 125 DIDTVVNISGRFNLARGMESRLGENFVQRIKQDGFIDVKNKRGKIVFRVTEESLMDRLNT 184
Query: 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDEL 259
H AC I ++CRVLT+HG+ D+ VPAEDALEF KFI NH+LHIIEGADHE+T HQDEL
Sbjct: 185 ITHLACLSIPENCRVLTVHGSMDETVPAEDALEFAKFILNHELHIIEGADHEYTYHQDEL 244
Query: 260 ASLVIQFIKANYQKDGPTSK-----RADGTIDSRM 289
SLV+ FIK + K+ TSK R D I SR
Sbjct: 245 TSLVLGFIKFHNDKENNTSKQTRFGRVDKLIHSRF 279
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Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356562183|ref|XP_003549351.1| PREDICTED: putative uncharacterized protein YDL057W-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/259 (69%), Positives = 213/259 (82%)
Query: 23 RRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDF 82
R+V I N+HGE LVGILH S LVIVCHGFQS+K+RIPMV LAAAL ++G S+FRFDF
Sbjct: 10 RKVTIRNNHGENLVGILHNAASISLVIVCHGFQSSKERIPMVYLAAALGKDGFSSFRFDF 69
Query: 83 SGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDIS 142
+GNGESEGSF YGNY RE EDLRA+VQ F + VITAI+GHSKGGN VLLYASKY DI
Sbjct: 70 AGNGESEGSFQYGNYYREVEDLRAVVQHFREQKYVITAIVGHSKGGNVVLLYASKYKDIH 129
Query: 143 IVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIH 202
IV+NISGRFNL RG+EGRL ++QRIKQ+G+IDV+NK+GK+ YRVT++SLMDRLST H
Sbjct: 130 IVVNISGRFNLARGMEGRLDKNFIQRIKQDGYIDVKNKRGKIMYRVTEDSLMDRLSTITH 189
Query: 203 AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASL 262
AC +I Q C VLTIHG+ D++VPAEDA+EF KFI NH+L IEGADHE+TSHQDEL SL
Sbjct: 190 LACLLIPQGCSVLTIHGSMDEIVPAEDAVEFTKFISNHELCFIEGADHEYTSHQDELTSL 249
Query: 263 VIQFIKANYQKDGPTSKRA 281
V++FIK + KD TSK+
Sbjct: 250 VLEFIKIHIDKDKDTSKQT 268
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447124|ref|XP_004141319.1| PREDICTED: uncharacterized protein LOC101208876 isoform 2 [Cucumis sativus] gi|449521635|ref|XP_004167835.1| PREDICTED: uncharacterized LOC101208876 isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/258 (68%), Positives = 210/258 (81%)
Query: 22 RRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFD 81
+RRVVI N+HGEKLVGILHETGS +LVIVCHGF+S+K+RIPMVNLA A E+E ISAFRFD
Sbjct: 4 QRRVVIRNNHGEKLVGILHETGSDELVIVCHGFRSSKERIPMVNLATAFEKERISAFRFD 63
Query: 82 FSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDI 141
F+GNGESEGSF YGNYRRE DLR++VQ F K + AIIGHSKGGN VLLYASKY DI
Sbjct: 64 FAGNGESEGSFQYGNYRRETGDLRSVVQYFHGKEHTVIAIIGHSKGGNVVLLYASKYRDI 123
Query: 142 SIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDI 201
V+NISGRFNL RGIEGRLG +LQRIKQ G+IDV+N++GK EYRVT+ESLMDRL+T++
Sbjct: 124 HTVVNISGRFNLDRGIEGRLGRDFLQRIKQKGYIDVKNRRGKFEYRVTEESLMDRLTTEV 183
Query: 202 HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELAS 261
A C I DCRVLT+HG+ D++VPA DA EF K I NH+L I+EGADH++TSHQDEL
Sbjct: 184 RAGCLTIQGDCRVLTVHGSMDRIVPAVDAFEFSKSIANHELCIMEGADHDYTSHQDELGL 243
Query: 262 LVIQFIKANYQKDGPTSK 279
+V+ F+K N SK
Sbjct: 244 VVVNFVKTNLHLHKDKSK 261
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447122|ref|XP_004141318.1| PREDICTED: uncharacterized protein LOC101208876 isoform 1 [Cucumis sativus] gi|449521633|ref|XP_004167834.1| PREDICTED: uncharacterized LOC101208876 isoform 1 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/261 (68%), Positives = 211/261 (80%)
Query: 19 VVQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAF 78
V +RRVVI N+HGEKLVGILHETGS +LVIVCHGF+S+K+RIPMVNLA A E+E ISAF
Sbjct: 10 VACQRRVVIRNNHGEKLVGILHETGSDELVIVCHGFRSSKERIPMVNLATAFEKERISAF 69
Query: 79 RFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY 138
RFDF+GNGESEGSF YGNYRRE DLR++VQ F K + AIIGHSKGGN VLLYASKY
Sbjct: 70 RFDFAGNGESEGSFQYGNYRRETGDLRSVVQYFHGKEHTVIAIIGHSKGGNVVLLYASKY 129
Query: 139 NDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLS 198
DI V+NISGRFNL RGIEGRLG +LQRIKQ G+IDV+N++GK EYRVT+ESLMDRL+
Sbjct: 130 RDIHTVVNISGRFNLDRGIEGRLGRDFLQRIKQKGYIDVKNRRGKFEYRVTEESLMDRLT 189
Query: 199 TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDE 258
T++ A C I DCRVLT+HG+ D++VPA DA EF K I NH+L I+EGADH++TSHQDE
Sbjct: 190 TEVRAGCLTIQGDCRVLTVHGSMDRIVPAVDAFEFSKSIANHELCIMEGADHDYTSHQDE 249
Query: 259 LASLVIQFIKANYQKDGPTSK 279
L +V+ F+K N SK
Sbjct: 250 LGLVVVNFVKTNLHLHKDKSK 270
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444897|ref|XP_002281718.1| PREDICTED: uncharacterized protein LOC100257601 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 170/259 (65%), Positives = 212/259 (81%)
Query: 16 QDPVVQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGI 75
Q+PV+Q+++V+I N+HGEKL+G LHETGS ++VI+CHGF+STK+ MVNLA ALE EGI
Sbjct: 57 QNPVIQQKKVIITNNHGEKLMGSLHETGSAEIVILCHGFRSTKENNTMVNLAIALENEGI 116
Query: 76 SAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYA 135
SAFR DF+GNGESEGSF YG Y REA+DL A++Q F RVI AI+GHSKGGN VLLYA
Sbjct: 117 SAFRLDFAGNGESEGSFQYGGYWREADDLHAVIQHFRGAKRVIHAILGHSKGGNVVLLYA 176
Query: 136 SKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMD 195
SKY+DI +V+N+SGR NLKRGI+ RLG + +RIK++GFIDV+NK G + YRVT++SLMD
Sbjct: 177 SKYHDIQMVLNVSGRHNLKRGIDERLGKDFFERIKKDGFIDVKNKTGSVNYRVTEKSLMD 236
Query: 196 RLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSH 255
RLSTD+H AC I + CRVLTIHG+ D+++P EDALEF K IPNH LHI+EGADH +TSH
Sbjct: 237 RLSTDMHEACLKIEKGCRVLTIHGSADEIIPVEDALEFAKIIPNHTLHIVEGADHRYTSH 296
Query: 256 QDELASLVIQFIKANYQKD 274
Q ELA + + FIK Q+D
Sbjct: 297 QAELALVALNFIKTGLQQD 315
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 289 | ||||||
| TAIR|locus:2143089 | 297 | AT5G11910 "AT5G11910" [Arabido | 0.989 | 0.962 | 0.592 | 2.3e-87 | |
| TAIR|locus:2079172 | 309 | AT3G47590 "AT3G47590" [Arabido | 0.830 | 0.776 | 0.640 | 1.7e-82 | |
| TAIR|locus:2019277 | 263 | AT1G29840 "AT1G29840" [Arabido | 0.830 | 0.912 | 0.619 | 4.2e-79 | |
| TAIR|locus:2079127 | 318 | AT3G47560 "AT3G47560" [Arabido | 0.321 | 0.292 | 0.623 | 6.3e-77 | |
| TAIR|locus:2050399 | 332 | AT2G19550 "AT2G19550" [Arabido | 0.823 | 0.716 | 0.574 | 2.3e-71 | |
| UNIPROTKB|Q47YQ1 | 251 | CPS_3394 "Putative uncharacter | 0.733 | 0.844 | 0.287 | 5e-14 | |
| TIGR_CMR|CPS_3394 | 251 | CPS_3394 "conserved hypothetic | 0.733 | 0.844 | 0.287 | 5e-14 | |
| UNIPROTKB|Q74B12 | 258 | GSU2450 "Hydrolase, putative" | 0.837 | 0.937 | 0.258 | 1.1e-09 | |
| TIGR_CMR|GSU_2450 | 258 | GSU_2450 "conserved hypothetic | 0.837 | 0.937 | 0.258 | 1.1e-09 | |
| UNIPROTKB|Q5LR31 | 406 | SPO2301 "OsmC-like family prot | 0.723 | 0.514 | 0.269 | 2.8e-09 |
| TAIR|locus:2143089 AT5G11910 "AT5G11910" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 170/287 (59%), Positives = 213/287 (74%)
Query: 1 MSVTRPTQSYRQGFXXXXXXXXXXXXIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDR 60
MS TR QS + I NSHGEKLVG+LH+TGS + V++CHGF+S+K+R
Sbjct: 1 MSETRRNQSSDEQIEKSEIQHQRVV-IENSHGEKLVGVLHDTGSTETVVICHGFRSSKNR 59
Query: 61 IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITA 120
IPM+ +A+ ER IS+FRFDF+GNGES+GSF YGNYRRE EDLR+++Q RVI+A
Sbjct: 60 IPMLTIASFFERAMISSFRFDFAGNGESQGSFQYGNYRREVEDLRSVLQHLRGVNRVISA 119
Query: 121 IIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNK 180
IIGHSKGGN VLLYA+KYND+ V+NISGRF L RGIE RLG Y +RIK NGFIDV N+
Sbjct: 120 IIGHSKGGNVVLLYAAKYNDVQTVVNISGRFFLDRGIEFRLGKDYFKRIKDNGFIDVSNR 179
Query: 181 KGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH 240
KGK EYRVT+ESLMDRL+T+ H AC I ++CRVLT+HG+ D++V +A EF K I NH
Sbjct: 180 KGKFEYRVTEESLMDRLTTNAHEACLSIRENCRVLTVHGSNDRIVHVTEASEFAKQIKNH 239
Query: 241 KLHIIEGADHEFTSHQDELASLVIQFIKANYQKDGPTSKRADGTIDS 287
KL++IEGADHEFTSHQ +LAS+V+ F K + +KD + + DS
Sbjct: 240 KLYVIEGADHEFTSHQHQLASIVLSFFKLDPKKDDESGDISTSNQDS 286
|
|
| TAIR|locus:2079172 AT3G47590 "AT3G47590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 155/242 (64%), Positives = 195/242 (80%)
Query: 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNG 86
IPN H EKLVG+LHETGS +V++CHGF+S K M N+AAA+++EGISAFRFDFSGNG
Sbjct: 63 IPNRHNEKLVGLLHETGSTDIVVLCHGFRSNKSNQIMNNVAAAIQKEGISAFRFDFSGNG 122
Query: 87 ESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVIN 146
ESEGSF YGNY EA+DL ++VQ F K RV+ I+GHSKGG+ VLLYASKY+D+ VIN
Sbjct: 123 ESEGSFYYGNYNHEADDLHSVVQYFSNKNRVVPIILGHSKGGDVVLLYASKYHDVRNVIN 182
Query: 147 ISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACH 206
+SGR++LK+GI RLG +L+RIKQ GFIDV + GK YRVT++SLMDRLSTDIH AC
Sbjct: 183 LSGRYDLKKGIRERLGEDFLERIKQQGFIDVGD--GKSGYRVTEKSLMDRLSTDIHEACL 240
Query: 207 MICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQF 266
I ++CRVLT+HG++D+++P EDA EF K IPNHKL I+EGA+H +T HQ +L S V++F
Sbjct: 241 KIDKECRVLTVHGSEDEVIPVEDAKEFAKIIPNHKLEIVEGANHGYTEHQSQLVSTVMEF 300
Query: 267 IK 268
IK
Sbjct: 301 IK 302
|
|
| TAIR|locus:2019277 AT1G29840 "AT1G29840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
Identities = 150/242 (61%), Positives = 195/242 (80%)
Query: 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNG 86
I NS+ EKLVG+LHETGS ++V++CHGF+STK+ M N+AAA+E+EGISAFRFDFSGNG
Sbjct: 17 ILNSNNEKLVGLLHETGSTEIVVLCHGFRSTKNDQVMKNVAAAIEKEGISAFRFDFSGNG 76
Query: 87 ESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVIN 146
ES+GSF +GNY EA+DL ++++ F RV+ IIGHSKGG+ VL+YASKY DI VIN
Sbjct: 77 ESKGSFYFGNYNYEADDLHSVIRYFTNMNRVVPIIIGHSKGGDVVLVYASKYQDIRNVIN 136
Query: 147 ISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACH 206
+SGR++LKRGI RLG YL+RIKQ GFID+ K+G +RVT+ESLM+RL+TD+H AC
Sbjct: 137 LSGRYDLKRGIGERLGEDYLERIKQQGFIDI--KEGNAGFRVTEESLMERLNTDMHEACL 194
Query: 207 MICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQF 266
I ++CRVLT+HG+ D+++P EDA EF K IPNHKL I+EGADH +T HQ +L + V++F
Sbjct: 195 KIDKECRVLTVHGSADEVIPLEDAKEFAKIIPNHKLEIVEGADHCYTKHQSQLITNVMEF 254
Query: 267 IK 268
IK
Sbjct: 255 IK 256
|
|
| TAIR|locus:2079127 AT3G47560 "AT3G47560" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 305 (112.4 bits), Expect = 6.3e-77, Sum P(3) = 6.3e-77
Identities = 58/93 (62%), Positives = 75/93 (80%)
Query: 87 ESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVIN 146
ESEGSF YGNY EA+DL +++Q F RV+T I+GHSKGG+ VLLYASKY+DI VIN
Sbjct: 101 ESEGSFYYGNYNYEADDLHSVIQYFSNLNRVVTIILGHSKGGDVVLLYASKYHDIPNVIN 160
Query: 147 ISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRN 179
+SGR++LK+GI RLG +L+RIKQ G+IDV++
Sbjct: 161 LSGRYDLKKGIGERLGEDFLERIKQQGYIDVKD 193
|
|
| TAIR|locus:2050399 AT2G19550 "AT2G19550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 142/247 (57%), Positives = 185/247 (74%)
Query: 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNG 86
IPN EKLVG+LHETGSK++V++CHGF+S K + N+A ALE+E IS+FRFDFSGNG
Sbjct: 8 IPNRRNEKLVGLLHETGSKEVVVLCHGFRSDKTNKILKNVATALEKEKISSFRFDFSGNG 67
Query: 87 ESEGSFLYGNYRREAED-LRAIVQDFCAKG---RVITAIIGHSKGGNAVLLYASKYND-I 141
+SEG+F YGN+ EAED L ++Q + R++ I+GHSKGG+ VLLYASK+ D I
Sbjct: 68 DSEGTFYYGNFNSEAEDDLHYVIQHLSSSNIMNRLVPVILGHSKGGDVVLLYASKFPDYI 127
Query: 142 SIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDI 201
V+NISGRF+LK + RLG GY+++IK+ GFID +GK +RVTQESLMDRL+TD+
Sbjct: 128 RNVVNISGRFDLKNDV--RLGDGYIEKIKEQGFIDAT--EGKSCFRVTQESLMDRLNTDM 183
Query: 202 HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELAS 261
H AC I + C+VLT+HG+ D +VP EDA EF K IPNHKL I+EGA+H +T HQ EL S
Sbjct: 184 HQACLNIDKQCKVLTVHGSDDTVVPGEDAKEFAKVIPNHKLEIVEGANHGYTKHQKELVS 243
Query: 262 LVIQFIK 268
+ ++F K
Sbjct: 244 IAVEFTK 250
|
|
| UNIPROTKB|Q47YQ1 CPS_3394 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 183 (69.5 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 65/226 (28%), Positives = 101/226 (44%)
Query: 30 SHGEKLVGILHETGSKQL---VIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNG 86
S + L G+L ET +++ V+ H F KD ++ L + G + FRFDF+G G
Sbjct: 9 SQDQYLAGLL-ETPEQKIRAYVLFAHCFTCGKDVAAASRISRFLVQHGFAVFRFDFTGLG 67
Query: 87 ESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVIN 146
S+G F N+ EDL + +IGHS GG AVL AS+ + V+
Sbjct: 68 NSDGDFANTNFSSNTEDLVSAAYFLEQNYEAPQLLIGHSLGGAAVLAMASQLPKVKGVVT 127
Query: 147 ISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMD-RLSTDIHAAC 205
I + I +L++I Q+G V G E+ + ++ L D R T H
Sbjct: 128 IGAPYEASHVIHNFDA--HLEKIDQSGSAKV--SLGSREFTIKKQFLDDLRNQTTEHIQ- 182
Query: 206 HMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHI-IEGADH 250
H+ + +L +H D V DA + K + K + ++ ADH
Sbjct: 183 HL---NKALLVLHSPIDLTVDISDAEKIYKAAKHPKSFVSLDTADH 225
|
|
| TIGR_CMR|CPS_3394 CPS_3394 "conserved hypothetical protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 183 (69.5 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 65/226 (28%), Positives = 101/226 (44%)
Query: 30 SHGEKLVGILHETGSKQL---VIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNG 86
S + L G+L ET +++ V+ H F KD ++ L + G + FRFDF+G G
Sbjct: 9 SQDQYLAGLL-ETPEQKIRAYVLFAHCFTCGKDVAAASRISRFLVQHGFAVFRFDFTGLG 67
Query: 87 ESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVIN 146
S+G F N+ EDL + +IGHS GG AVL AS+ + V+
Sbjct: 68 NSDGDFANTNFSSNTEDLVSAAYFLEQNYEAPQLLIGHSLGGAAVLAMASQLPKVKGVVT 127
Query: 147 ISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMD-RLSTDIHAAC 205
I + I +L++I Q+G V G E+ + ++ L D R T H
Sbjct: 128 IGAPYEASHVIHNFDA--HLEKIDQSGSAKV--SLGSREFTIKKQFLDDLRNQTTEHIQ- 182
Query: 206 HMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHI-IEGADH 250
H+ + +L +H D V DA + K + K + ++ ADH
Sbjct: 183 HL---NKALLVLHSPIDLTVDISDAEKIYKAAKHPKSFVSLDTADH 225
|
|
| UNIPROTKB|Q74B12 GSU2450 "Hydrolase, putative" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 158 (60.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 66/255 (25%), Positives = 101/255 (39%)
Query: 28 PNSHGEKLVGILHETGSKQLV---IVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSG 84
P G +L GIL ++ V + H F +K+ MV + L +GI RFDF+G
Sbjct: 9 PGGRGAELSGILDLPEGREPVAFALFAHCFTCSKELKSMVAINRVLTEQGIGVLRFDFTG 68
Query: 85 NGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI-IGHSKGGNAVLLYASKYNDISI 143
GES G F + +DL A F + ++ IGHS GG L A
Sbjct: 69 LGESGGDFSETGFTSTVDDLLAAAS-FLERSHATPSLLIGHSLGGTTCLAAAGAIKGCRA 127
Query: 144 VINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHA 203
V+ I + G+ L G + QNG V G+ +R+ + L D +
Sbjct: 128 VVVIGSPAS-PAGLR-HLFTGKEDELAQNGSAQVM-VAGR-PFRLGRSFLDDVTGVRLDG 183
Query: 204 ACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHK-LHIIEGADHEFTSHQD-ELAS 261
A + +L +H D++V A P + L ++ ADH + +D A+
Sbjct: 184 AIATL--GVPLLILHAPDDQVVGFHHAERIFSLAPQPRSLVALDRADHLLLAEEDARYAA 241
Query: 262 LVIQFIKANYQKDGP 276
+I Y P
Sbjct: 242 GIIAAWAVRYLSPDP 256
|
|
| TIGR_CMR|GSU_2450 GSU_2450 "conserved hypothetical protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 158 (60.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 66/255 (25%), Positives = 101/255 (39%)
Query: 28 PNSHGEKLVGILHETGSKQLV---IVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSG 84
P G +L GIL ++ V + H F +K+ MV + L +GI RFDF+G
Sbjct: 9 PGGRGAELSGILDLPEGREPVAFALFAHCFTCSKELKSMVAINRVLTEQGIGVLRFDFTG 68
Query: 85 NGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI-IGHSKGGNAVLLYASKYNDISI 143
GES G F + +DL A F + ++ IGHS GG L A
Sbjct: 69 LGESGGDFSETGFTSTVDDLLAAAS-FLERSHATPSLLIGHSLGGTTCLAAAGAIKGCRA 127
Query: 144 VINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHA 203
V+ I + G+ L G + QNG V G+ +R+ + L D +
Sbjct: 128 VVVIGSPAS-PAGLR-HLFTGKEDELAQNGSAQVM-VAGR-PFRLGRSFLDDVTGVRLDG 183
Query: 204 ACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHK-LHIIEGADHEFTSHQD-ELAS 261
A + +L +H D++V A P + L ++ ADH + +D A+
Sbjct: 184 AIATL--GVPLLILHAPDDQVVGFHHAERIFSLAPQPRSLVALDRADHLLLAEEDARYAA 241
Query: 262 LVIQFIKANYQKDGP 276
+I Y P
Sbjct: 242 GIIAAWAVRYLSPDP 256
|
|
| UNIPROTKB|Q5LR31 SPO2301 "OsmC-like family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 160 (61.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 59/219 (26%), Positives = 98/219 (44%)
Query: 49 IVCHGFQSTKDRIPMVN-LAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI 107
+ H F +KD IP +AA L GI+ RFDF+G G SEG F + DL A
Sbjct: 32 LFAHCFTCSKD-IPAARRIAARLAAMGIAVLRFDFTGLGHSEGEFANTTFTSNVGDLAAA 90
Query: 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQ 167
+ + +IGHS GG AVL ++ + V+ I + G L
Sbjct: 91 ARYLAGRDMAPALLIGHSLGGAAVLRARAQIASVRAVVTIGAPAD--PGHVAHHFETALP 148
Query: 168 RIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPA 227
RI+ G +V G +R+ ++ + D ++ + A + +L +H +D+ V
Sbjct: 149 RIQAEGAAEVC--LGGRPFRIGRDFVEDIAASALQPAIADL--RAALLVLHAPRDETVSI 204
Query: 228 EDALEFDKFIPNHKLHI-IEGADHEFTSHQD-ELASLVI 264
++A + + K + ++ ADH + +D E A+ VI
Sbjct: 205 DNASQIFMAAKHPKSFVTLDDADHLISRARDAEYAAEVI 243
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 289 | |||
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-18 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 2e-17 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 2e-11 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 2e-09 | |
| COG1506 | 620 | COG1506, DAP2, Dipeptidyl aminopeptidases/acylamin | 5e-09 | |
| COG2945 | 210 | COG2945, COG2945, Predicted hydrolase of the alpha | 1e-08 | |
| COG1073 | 299 | COG1073, COG1073, Hydrolases of the alpha/beta sup | 2e-07 | |
| TIGR03100 | 274 | TIGR03100, hydr1_PEP, exosortase A system-associat | 5e-06 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 2e-05 | |
| pfam08840 | 211 | pfam08840, BAAT_C, BAAT / Acyl-CoA thioester hydro | 1e-04 | |
| COG1647 | 243 | COG1647, COG1647, Esterase/lipase [General functio | 1e-04 | |
| pfam12146 | 80 | pfam12146, Hydrolase_4, Putative lysophospholipase | 4e-04 | |
| TIGR01738 | 245 | TIGR01738, bioH, pimelyl-[acyl-carrier protein] me | 4e-04 | |
| COG0429 | 345 | COG0429, COG0429, Predicted hydrolase of the alpha | 8e-04 | |
| pfam01738 | 215 | pfam01738, DLH, Dienelactone hydrolase family | 0.002 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 2e-18
Identities = 47/205 (22%), Positives = 70/205 (34%), Gaps = 62/205 (30%)
Query: 47 LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRA 106
LV++ HG + LA AL G + D+ G+G S G A D A
Sbjct: 1 LVVLLHGAGGDPEA--YAPLARALASRGYNVVAVDYPGHGASLG----------APDAEA 48
Query: 107 IVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYL 166
++ D I ++GHS GG LL A++ + + ++
Sbjct: 49 VLADAPLDPERI-VLVGHSLGGGVALLLAARDPRVKAAVVLAA----------------- 90
Query: 167 QRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVP 226
+D L+ VL IHGT+D +VP
Sbjct: 91 ---------------------GDPPDALDDLAK----------LTVPVLIIHGTRDGVVP 119
Query: 227 AEDALEFDKFIPNHK-LHIIEGADH 250
E+A +P L +IEGA H
Sbjct: 120 PEEAEALAAALPGPAELVVIEGAGH 144
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 2e-17
Identities = 49/220 (22%), Positives = 83/220 (37%), Gaps = 38/220 (17%)
Query: 48 VIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEG-SFLYGNYRREAEDLRA 106
V++ HG + + LA AL G D G+G+S+G + +A DL A
Sbjct: 1 VVLLHGAGGSAES--WRPLAEALAA-GYRVLAPDLPGHGDSDGPPRTPYSLEDDAADLAA 57
Query: 107 IVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-IS--IVINISGRFNLKRGIEGRLGL 163
++ G V+ ++GHS GG L A++ + ++ ++I+ R +
Sbjct: 58 LLDALGL-GPVV--LVGHSLGGAVALAAAARRPERVAGLVLISPPLRDLEEL-------- 106
Query: 164 GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDK 223
+ L + L L + VL IHG D
Sbjct: 107 -------------LAADAAALLALLRAALLDADLREALARL------TVPVLVIHGEDDP 147
Query: 224 MVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASL 262
+VP E A + +P +L ++ GA H H +E+A
Sbjct: 148 LVPPEAARRLAEALPGAELVVLPGAGHLPHLEHPEEVAEA 187
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 63.1 bits (152), Expect = 2e-11
Identities = 49/268 (18%), Positives = 83/268 (30%), Gaps = 50/268 (18%)
Query: 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDL 104
+++ HGF + V D G+G S+ + + A+DL
Sbjct: 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAG--YSLSAYADDL 78
Query: 105 RAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDIS---IVINISG------------ 149
A++ +V+ ++GHS GG L A ++ D ++I +
Sbjct: 79 AALLDAL-GLEKVV--LVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQP 135
Query: 150 -----------------RFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQES 192
+ L L + G +
Sbjct: 136 AGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFAR 195
Query: 193 LM---------DRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH-KL 242
L D+ AA I L IHG D +VPAE A +PN +L
Sbjct: 196 AARADLAAALLALLDRDLRAALARI--TVPTLIIHGEDDPVVPAELARRLAAALPNDARL 253
Query: 243 HIIEGADH-EFTSHQDELASLVIQFIKA 269
+I GA H + A+ ++ F++
Sbjct: 254 VVIPGAGHFPHLEAPEAFAAALLAFLER 281
|
Length = 282 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 2e-09
Identities = 45/226 (19%), Positives = 73/226 (32%), Gaps = 41/226 (18%)
Query: 78 FRFDFSGNGESEGSFLYGNYRRE--AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYA 135
FD G G S + +YR + AEDL A++ + +GHS GG L YA
Sbjct: 4 IAFDLRGFGRSSPPKDFADYRFDDLAEDLEALLDALGLDKVNL---VGHSMGGLIALAYA 60
Query: 136 SKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID--VRNKKGKLEYRVTQES 192
+KY D + ++ + L + N F + ++
Sbjct: 61 AKYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRAIKQFQA 120
Query: 193 LMDRLSTDIH--------AACHMIC------------------------QDCRVLTIHGT 220
L +D D L I G
Sbjct: 121 LGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALKDIDVPTLIIWGD 180
Query: 221 KDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQ 265
D +VP + + + PN +L +I+ A H DE+A L+++
Sbjct: 181 DDPLVPPDASEKLAALFPNAQLVVIDDAGHLAQLEKPDEVAELILK 226
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|224423 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 5e-09
Identities = 42/199 (21%), Positives = 67/199 (33%), Gaps = 32/199 (16%)
Query: 83 SGNGESEGSFLYGNY-RREAEDLRAIV-----QDFCAKGRVITAIIGHSKGGNAVLLYAS 136
+G G + G++ + EDL A V R+ I G S GG LL A+
Sbjct: 435 TGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERI--GITGGSYGGYMTLLAAT 492
Query: 137 KYNDI-SIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMD 195
K + V G L E GL + G + R K +
Sbjct: 493 KTPRFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREK-------------YE 539
Query: 196 RLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHE 251
S + +L IHG +D VP E A + + +L + H
Sbjct: 540 DRS----PIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595
Query: 252 FTSHQDELASL--VIQFIK 268
F+ ++ + L ++ + K
Sbjct: 596 FSRPENRVKVLKEILDWFK 614
|
Length = 620 |
| >gnl|CDD|225496 COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 1e-08
Identities = 51/235 (21%), Positives = 77/235 (32%), Gaps = 62/235 (26%)
Query: 41 ETGSKQLVIVCHG---FQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNY 97
+T + + ++CH F T + + LA AL + G + RF+F G G S+G F G
Sbjct: 24 KTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG-- 81
Query: 98 RREAEDLRAI---VQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLK 154
E ED A +Q + G S G I + ++ R
Sbjct: 82 IGELEDAAAALDWLQARHPDSAS-CWLAGFSFGA-------------YIAMQLAMR---- 123
Query: 155 RGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCR- 213
R + FI + I+A C
Sbjct: 124 -------------RPEILVFISI--------------------LPPINAYDFSFLAPCPS 150
Query: 214 -VLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFI 267
L I G D +V L++ + I + I GADH F EL + F+
Sbjct: 151 PGLVIQGDADDVVDLVAVLKWQESIK-ITVITIPGADHFFHGKLIELRDTIADFL 204
|
Length = 210 |
| >gnl|CDD|223999 COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.9 bits (121), Expect = 2e-07
Identities = 56/283 (19%), Positives = 91/283 (32%), Gaps = 37/283 (13%)
Query: 19 VVQRRRVVIPNSHGEKLVGILHETGSKQ------LVIVCHGFQSTKDRIPMVNLAAALER 72
V+ + + N G L +LH S V+ HGF S+K++ A L
Sbjct: 17 VLSAIMISLANRTGIALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSL--GYAVLLAE 74
Query: 73 EGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAIV----------QDFC----AKGRV 117
+G D S GES G + AED A V +D+ + G
Sbjct: 75 KGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPR 134
Query: 118 ITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDV 177
I A G S GG + + I G L LG + + +
Sbjct: 135 ILA--GLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELIDYL 192
Query: 178 RNKKGKLEYRVTQESLMDRLSTD----IHAACHMICQ--DCRVLTIHGTKDKMVPAEDAL 231
G + L + + VL +HG +D++VP DA
Sbjct: 193 ITPGGFAPLPAPEAPLDTLPLRAVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAE 252
Query: 232 E-FDKFIPNHK-LHIIEGADHEFT----SHQDELASLVIQFIK 268
+ ++ K L + G H ++ + +F++
Sbjct: 253 DLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLE 295
|
Length = 299 |
| >gnl|CDD|132144 TIGR03100, hydr1_PEP, exosortase A system-associated hydrolase 1 | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 5e-06
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 32 GEKLVGILHETGSKQ---LVIVCHGFQSTKDRI----PMVNLAAALEREGISAFRFDFSG 84
GE LVG+LH G+ ++IV G Q R+ V LA L G RFD+ G
Sbjct: 11 GETLVGVLHIPGASHTTGVLIVVGGPQY---RVGSHRQFVLLARRLAEAGFPVLRFDYRG 67
Query: 85 NGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAII--GHSKGGNAVLLYA 135
G+SEG + D+ A + F + I+ G +A LLYA
Sbjct: 68 MGDSEGEN--LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYA 118
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system , specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. Length = 274 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 52/251 (20%), Positives = 81/251 (32%), Gaps = 47/251 (18%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL--YGNY 97
K +V++ HG R LA L G + D G+G S ++
Sbjct: 29 APEPPKGVVVLVHGLGEHSGRYE--ELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSF 86
Query: 98 RREAEDLRAIVQDFCAKG---RVITAIIGHSKGGNAVLLYASKY-NDISIVINISGRFNL 153
+DL A V+ V ++GHS GG LLY ++Y I ++ S L
Sbjct: 87 ADYVDDLDAFVETIAEPDPGLPVF--LLGHSMGGLIALLYLARYPPRIDGLVLSSPALGL 144
Query: 154 KRGIE----------GRLGLGYLQRIKQNGFIDV------RNK-------------KGKL 184
I + + N V R+ G
Sbjct: 145 GGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGP 204
Query: 185 EYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKF----IPNH 240
R +L+ + + A VL + G D++V + L F P+
Sbjct: 205 VSRWVDLALL---AGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLA-RFFERAGSPDK 260
Query: 241 KLHIIEGADHE 251
+L +I GA HE
Sbjct: 261 ELKVIPGAYHE 271
|
Length = 298 |
| >gnl|CDD|204080 pfam08840, BAAT_C, BAAT / Acyl-CoA thioester hydrolase C terminal | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 18/123 (14%)
Query: 114 KGRVITAIIGHSKGGNAVLLYASKYNDISIVINISG------RFNLKRGIEGRLGLGYLQ 167
KG I ++G SKGG L AS IS V++I+G L + L
Sbjct: 20 KGDKI-GLLGISKGGELALSMASFLKQISAVVSINGSAVVYGGPLLYKDNP-------LP 71
Query: 168 RIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQ-DCRVLTIHGTKDKMVP 226
+ NK G L+ R + + + A + + +L + G D P
Sbjct: 72 PLGFGMEKIKVNKNGLLDIRDMFNLPLSKPA---LKALIPVERAKGPILFVVGEDDHNWP 128
Query: 227 AED 229
+ +
Sbjct: 129 SVE 131
|
This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT). Length = 211 |
| >gnl|CDD|224561 COG1647, COG1647, Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 57/245 (23%), Positives = 93/245 (37%), Gaps = 32/245 (13%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
G + V++ HGF T + M L L G + + + G+G FL R E
Sbjct: 13 GGNRAVLLLHGFTGTPRDVRM--LGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWE 70
Query: 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLG 162
D+ +D G A++G S GG L A Y IV + N+K +
Sbjct: 71 DVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYPPKKIVP-MCAPVNVKS--WRIII 127
Query: 163 LGYLQRIKQNGFIDVRN--------KKGKLEYRVTQESL---MDRLSTD---IHAACHMI 208
G L+ + + ++ K K T L + I++
Sbjct: 128 EGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSP---- 183
Query: 209 CQDCRVLTIHGTKDKMVPAEDA-LEFDKFIPN-HKLHIIEGADHEFT--SHQDELASLVI 264
L + G +D+MVPAE A +D + +L +EG+ H T +D++ VI
Sbjct: 184 -----TLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVI 238
Query: 265 QFIKA 269
F++
Sbjct: 239 TFLEK 243
|
Length = 243 |
| >gnl|CDD|221442 pfam12146, Hydrolase_4, Putative lysophospholipase | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 4e-04
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY-GNYRREAED 103
K +V++ HG R LA L +G + + +D G+G S G + ++ +D
Sbjct: 17 KAVVVLVHGGGEHSGR--YAELAEELAAQGYAVYAYDHRGHGRSPGKRGHVPSFDDYVDD 74
Query: 104 LRAIVQ 109
L V+
Sbjct: 75 LDTFVE 80
|
This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. Length = 80 |
| >gnl|CDD|130799 TIGR01738, bioH, pimelyl-[acyl-carrier protein] methyl ester esterase | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 4e-04
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 214 VLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFI 267
L ++G D +VPA+ DK P+ +L+I A H F SH + +L++ F
Sbjct: 191 FLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (Pfam model pfam00561). Members of this family are restricted to the Proteobacteria [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 245 |
| >gnl|CDD|223506 COG0429, COG0429, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 8e-04
Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 14/138 (10%)
Query: 12 QGFQQDPVVQRRRVVIPNSHGEKLVGILH-----ETGSKQLVIVCHGFQ-STKDRIPMVN 65
+ F++ P V R + G L K LV++ HG + S+
Sbjct: 39 RLFRRKPKVAYTRERLETPDGG--FIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPY-ARG 95
Query: 66 LAAALEREGISAFRFDFSG-NGESEGS-FLYGNYRREAEDLRAIVQDF-CAKGRVITAII 122
L AL R G F F G +GE+ S LY + E ED+R + +
Sbjct: 96 LMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSG--ETEDIRFFLDWLKARFPPRPLYAV 153
Query: 123 GHSKGGNAVLLYASKYND 140
G S GGN + Y + D
Sbjct: 154 GFSLGGNMLANYLGEEGD 171
|
Length = 345 |
| >gnl|CDD|216672 pfam01738, DLH, Dienelactone hydrolase family | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.002
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFI----PNHKLHIIEGADHEFT 253
+L G +D VPAE ++ + +H+LH+ GA H F
Sbjct: 143 KAPILAHFGEEDPFVPAEARDLLEEALRAANVDHELHVYPGAGHAFA 189
|
Length = 215 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 289 | |||
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 100.0 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.98 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.98 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.98 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.97 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.97 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.97 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.97 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.97 | |
| PLN02578 | 354 | hydrolase | 99.97 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.97 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.97 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.97 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.97 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.97 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.97 | |
| PLN02511 | 388 | hydrolase | 99.97 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.97 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.97 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.96 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.96 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.96 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.96 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.96 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.96 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.96 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.96 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.96 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.96 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.96 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.95 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.95 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.95 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.95 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.95 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.95 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.95 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.94 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.94 | |
| PRK10566 | 249 | esterase; Provisional | 99.94 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.93 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.93 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.93 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.93 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.92 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.92 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.91 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.91 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.91 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.9 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.9 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.9 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.9 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.89 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.89 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.88 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.88 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.88 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.87 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.87 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.86 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.85 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.85 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.84 | |
| PRK10115 | 686 | protease 2; Provisional | 99.84 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.84 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.83 | |
| PLN00021 | 313 | chlorophyllase | 99.83 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.82 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.82 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.82 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.81 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.81 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.8 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.79 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.79 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.77 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.75 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.74 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.74 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.7 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.7 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.69 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.69 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.69 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.69 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.68 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.67 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.67 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.65 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.65 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.64 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.64 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.64 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.63 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.63 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.63 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.62 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.62 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.61 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.61 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.59 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.59 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.58 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.58 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.57 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.57 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.56 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.56 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.53 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.52 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.52 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.51 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.47 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.46 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 99.45 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.43 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.42 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.4 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.38 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.38 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 99.37 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 99.35 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.34 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.34 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 99.32 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.32 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.29 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.26 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.24 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 99.24 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.21 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 99.18 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 99.18 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 99.17 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 99.13 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 99.12 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 99.12 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 99.11 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 99.1 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 99.1 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.07 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 99.06 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.03 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 99.01 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.97 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.94 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.92 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.91 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.89 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.89 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.8 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.79 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 98.77 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.76 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.75 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.68 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.67 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.67 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.65 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.64 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.63 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 98.59 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 98.56 | |
| PLN02209 | 437 | serine carboxypeptidase | 98.56 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.52 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.51 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.47 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.42 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 98.42 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.42 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 98.33 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 98.33 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.32 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 98.3 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 98.29 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 98.27 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 98.22 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 98.17 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 98.17 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.95 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 97.9 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 97.85 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 97.84 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 97.6 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.55 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.48 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 97.43 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 97.42 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 97.41 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.24 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.14 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 97.11 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 97.09 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 97.07 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 97.06 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 97.04 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 97.03 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 97.03 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 96.97 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.56 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 96.55 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 96.2 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 96.03 | |
| PLN02310 | 405 | triacylglycerol lipase | 95.98 | |
| PLN00413 | 479 | triacylglycerol lipase | 95.93 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 95.81 | |
| PLN02571 | 413 | triacylglycerol lipase | 95.79 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.77 | |
| PLN02162 | 475 | triacylglycerol lipase | 95.77 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 95.76 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.57 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 95.49 | |
| PLN02408 | 365 | phospholipase A1 | 95.47 | |
| PLN02324 | 415 | triacylglycerol lipase | 95.38 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 95.25 | |
| PLN02719 | 518 | triacylglycerol lipase | 95.16 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.0 | |
| PLN02753 | 531 | triacylglycerol lipase | 94.99 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 94.81 | |
| PLN02847 | 633 | triacylglycerol lipase | 94.73 | |
| PLN02761 | 527 | lipase class 3 family protein | 94.7 | |
| PLN02802 | 509 | triacylglycerol lipase | 94.64 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 94.48 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 93.88 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 93.64 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 93.26 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 93.19 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 92.85 | |
| PF09994 | 277 | DUF2235: Uncharacterized alpha/beta hydrolase doma | 92.85 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 91.97 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 91.97 | |
| ) proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor" target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF06309">PF06309 | 127 | Torsin: Torsin; InterPro: IPR010448 This family co | 90.7 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 90.32 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 90.27 | |
| PF06792 | 403 | UPF0261: Uncharacterised protein family (UPF0261); | 89.92 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 89.76 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 89.68 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 89.14 | |
| COG3673 | 423 | Uncharacterized conserved protein [Function unknow | 88.49 | |
| PRK02399 | 406 | hypothetical protein; Provisional | 88.25 | |
| COG4822 | 265 | CbiK Cobalamin biosynthesis protein CbiK, Co2+ che | 88.19 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 85.0 | |
| PF10081 | 289 | Abhydrolase_9: Alpha/beta-hydrolase family; InterP | 84.26 | |
| cd07198 | 172 | Patatin Patatin-like phospholipase. Patatin is a s | 83.97 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 83.41 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 83.04 | |
| cd07225 | 306 | Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai | 82.15 | |
| cd07207 | 194 | Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho | 81.93 | |
| PRK10279 | 300 | hypothetical protein; Provisional | 81.84 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 81.26 | |
| cd07210 | 221 | Pat_hypo_W_succinogenes_WS1459_like Hypothetical p | 80.92 |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=205.86 Aligned_cols=252 Identities=64% Similarity=1.056 Sum_probs=230.4
Q ss_pred ceeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHH
Q 022960 21 QRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRRE 100 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~ 100 (289)
..+.+.++...+.++.+.....++...+|++||+-.+...-+...++..|++.|+.++.+|++|.|+|.+.+.+..+...
T Consensus 9 ~~~~ivi~n~~ne~lvg~lh~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~e 88 (269)
T KOG4667|consen 9 IAQKIVIPNSRNEKLVGLLHETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTE 88 (269)
T ss_pred eeeEEEeccCCCchhhcceeccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccch
Confidence 55678888888888888888899999999999999998766678899999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCccccccc
Q 022960 101 AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNK 180 (289)
Q Consensus 101 ~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (289)
++|+..+++++......--+++|||-||.+++.++.+++++.-+|.+++.++....+.+++.+.++.++...++.+....
T Consensus 89 adDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~r 168 (269)
T KOG4667|consen 89 ADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPR 168 (269)
T ss_pred HHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCcc
Confidence 99999999999765433348999999999999999999999999999999999998888999999999999999999999
Q ss_pred ccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHH
Q 022960 181 KGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELA 260 (289)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 260 (289)
.+...+.++.+.+.+.+..+....+..+..+||||-+||..|.+||.+.++++++.+++.++.+++|+.|.+..+..+..
T Consensus 169 kG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~l~ 248 (269)
T KOG4667|consen 169 KGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQLV 248 (269)
T ss_pred cCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchhhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHhhcC
Q 022960 261 SLVIQFIKANYQ 272 (289)
Q Consensus 261 ~~i~~fl~~~~~ 272 (289)
.....|......
T Consensus 249 ~lgl~f~k~r~n 260 (269)
T KOG4667|consen 249 SLGLEFIKTRIN 260 (269)
T ss_pred hhcceeEEeeec
Confidence 888877755443
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=227.20 Aligned_cols=254 Identities=18% Similarity=0.238 Sum_probs=171.7
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL- 93 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~- 93 (289)
.+...++..+.+.+|.++.+..+.|. .+++|||+||++++.. .+|..+++.|+++||+|+++|+||||.|++...
T Consensus 57 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 135 (349)
T PLN02385 57 SGIKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCT-FFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGY 135 (349)
T ss_pred cCcceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccc-hHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC
Confidence 34555666677789999998887663 4679999999998764 246889999999999999999999999987543
Q ss_pred ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc-cccchhHhh
Q 022960 94 YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG-RLGLGYLQR 168 (289)
Q Consensus 94 ~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~-~~~~~~~~~ 168 (289)
..+++.+++|+.++++.+... ...+++|+||||||.+++.++.++|+ ++++|+++|.......... .....+...
T Consensus 136 ~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~ 215 (349)
T PLN02385 136 IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILIL 215 (349)
T ss_pred cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHH
Confidence 347788899999999988543 23479999999999999999999999 9999999986543221100 000000000
Q ss_pred hhh---c-------Ccccc-ccc--------ccccccc--cChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccCh
Q 022960 169 IKQ---N-------GFIDV-RNK--------KGKLEYR--VTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPA 227 (289)
Q Consensus 169 ~~~---~-------~~~~~-~~~--------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 227 (289)
+.. . .+... ... .....+. .........+...........++++|+|+++|++|.++|+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 216 LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 000 0 00000 000 0000000 0000111111110011111225689999999999999999
Q ss_pred hhHHHHHhhC--CCcEEEEEcCCCcccc-cCchH----HHHHHHHHHHhhcC
Q 022960 228 EDALEFDKFI--PNHKLHIIEGADHEFT-SHQDE----LASLVIQFIKANYQ 272 (289)
Q Consensus 228 ~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~----~~~~i~~fl~~~~~ 272 (289)
+.++.+++.+ +++++++++++||.++ +++++ +++.|.+||+++..
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999887 4689999999999976 55554 78889999988764
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-33 Score=221.67 Aligned_cols=255 Identities=15% Similarity=0.209 Sum_probs=171.3
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL 93 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 93 (289)
.++..+...+.+.||.+++++.+.+. .+++|||+||++.+.. +.|..++..|+++||+|+++|+||||.|.+...
T Consensus 28 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~-~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~ 106 (330)
T PLN02298 28 KGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDIS-WTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA 106 (330)
T ss_pred cCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcc-eehhHHHHHHHhCCCEEEEecCCCCCCCCCccc
Confidence 34666777888899999998776543 3567999999987653 457788889999999999999999999975433
Q ss_pred -ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccc-cch---
Q 022960 94 -YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRL-GLG--- 164 (289)
Q Consensus 94 -~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~-~~~--- 164 (289)
..+++..++|+.++++++... ...+++|+||||||.+++.++..+|+ |+++|+++|............ ...
T Consensus 107 ~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 186 (330)
T PLN02298 107 YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILT 186 (330)
T ss_pred cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHH
Confidence 346788899999999999754 23479999999999999999999998 999999998754332211000 000
Q ss_pred hHhhhhhcCc----ccccccc------------ccccccc--ChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccC
Q 022960 165 YLQRIKQNGF----IDVRNKK------------GKLEYRV--TQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVP 226 (289)
Q Consensus 165 ~~~~~~~~~~----~~~~~~~------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 226 (289)
+...+..... ....... ....+.. ....+...+............+++|+|+++|++|.++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp 266 (330)
T PLN02298 187 FVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTD 266 (330)
T ss_pred HHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCC
Confidence 0111100000 0000000 0000000 00000000000000011122468999999999999999
Q ss_pred hhhHHHHHhhCC--CcEEEEEcCCCcccc-cCch----HHHHHHHHHHHhhcCC
Q 022960 227 AEDALEFDKFIP--NHKLHIIEGADHEFT-SHQD----ELASLVIQFIKANYQK 273 (289)
Q Consensus 227 ~~~~~~~~~~~~--~~~~~~~~~~gH~~~-~~~~----~~~~~i~~fl~~~~~~ 273 (289)
++.++.+++.++ +++++++++++|.++ ++++ ++.+.|.+||++.+..
T Consensus 267 ~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 267 PDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred HHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 999999988874 689999999999975 5553 4778889999988644
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=219.68 Aligned_cols=246 Identities=18% Similarity=0.183 Sum_probs=161.3
Q ss_pred ccceeeEEeeCCCCce--EEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cc
Q 022960 19 VVQRRRVVIPNSHGEK--LVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LY 94 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~--l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~ 94 (289)
.+..+.+++...+|.+ +++...+.+.+|+|||+||++++... |..+++.|.+.||+|+++|+||||.|+.+. ..
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~--w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~ 95 (302)
T PRK00870 18 PFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYL--YRKMIPILAAAGHRVIAPDLIGFGRSDKPTRRED 95 (302)
T ss_pred CCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhh--HHHHHHHHHhCCCEEEEECCCCCCCCCCCCCccc
Confidence 3455566666555654 44433333357899999999988854 999999998889999999999999997653 24
Q ss_pred cchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc-----ccccc------c
Q 022960 95 GNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG-----IEGRL------G 162 (289)
Q Consensus 95 ~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-----~~~~~------~ 162 (289)
.+++++++|+.++++.+ +.++++++||||||.+++.++..+|+ |+++|++++....... ..... .
T Consensus 96 ~~~~~~a~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (302)
T PRK00870 96 YTYARHVEWMRSWFEQL---DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSP 172 (302)
T ss_pred CCHHHHHHHHHHHHHHc---CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCc
Confidence 57788899999999887 77789999999999999999999999 9999999864321110 00000 0
Q ss_pred chhHhhhhhcCccc-cccc--------ccccccccChhhhhhhh---------ccchhhhhcccccCceEEEEEeCCCCc
Q 022960 163 LGYLQRIKQNGFID-VRNK--------KGKLEYRVTQESLMDRL---------STDIHAACHMICQDCRVLTIHGTKDKM 224 (289)
Q Consensus 163 ~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~P~l~i~g~~D~~ 224 (289)
.............. .... .....+......+.... ...........++++|+++|+|++|.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 252 (302)
T PRK00870 173 VLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPI 252 (302)
T ss_pred hhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCc
Confidence 00000000000000 0000 00000000000000000 000000011235699999999999999
Q ss_pred cChhhHHHHHhhCCCcE---EEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 225 VPAEDALEFDKFIPNHK---LHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 225 ~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
+|... +.+.+.+++++ +.+++++||+++ ++++++++.|.+|++++
T Consensus 253 ~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 253 TGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred ccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 99866 88999998876 889999999966 67789999999999753
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=213.86 Aligned_cols=242 Identities=19% Similarity=0.233 Sum_probs=161.3
Q ss_pred eeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHH
Q 022960 27 IPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAED 103 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d 103 (289)
+...||..+.+.++.|+ +++.|+++||++++.. .|..+++.|+++||+|+++|+||||.|.+.. ...++...++|
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~--~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d 82 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSG--RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRD 82 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccc--hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHH
Confidence 34568999999888774 4667777799998875 4999999999999999999999999997643 23466677888
Q ss_pred HHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc-cccccchhHhhhhhcCccc----
Q 022960 104 LRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGI-EGRLGLGYLQRIKQNGFID---- 176 (289)
Q Consensus 104 ~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---- 176 (289)
+.+.++.++.. ...+++|+||||||.+|+.++.++|+ ++++|+++|........ ...................
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCP 162 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCH
Confidence 88888877544 34579999999999999999999999 99999999865421100 0000000000000000000
Q ss_pred -ccccc--ccccc---------ccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC-CCcEEE
Q 022960 177 -VRNKK--GKLEY---------RVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI-PNHKLH 243 (289)
Q Consensus 177 -~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~ 243 (289)
..... ....+ ......................++++|+|+++|++|.++|++.++.+.+.+ +++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~ 242 (276)
T PHA02857 163 ESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIK 242 (276)
T ss_pred hhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEE
Confidence 00000 00000 000000000000000001112256899999999999999999999998887 468999
Q ss_pred EEcCCCcccccC----chHHHHHHHHHHHhh
Q 022960 244 IIEGADHEFTSH----QDELASLVIQFIKAN 270 (289)
Q Consensus 244 ~~~~~gH~~~~~----~~~~~~~i~~fl~~~ 270 (289)
+++++||.++.+ .+++.+.+.+||+++
T Consensus 243 ~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 243 IYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 999999997744 246899999999875
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=213.88 Aligned_cols=237 Identities=16% Similarity=0.230 Sum_probs=162.1
Q ss_pred CCCceEEEEEeecC-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETG-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV 108 (289)
Q Consensus 30 ~~g~~l~~~~~~~~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 108 (289)
.+|.++++.+...+ .+++|||+||++++... |..+.+.|.+. |+|+++|+||||.|+.+....+++.+++|+.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~--w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i 85 (276)
T TIGR02240 9 LDGQSIRTAVRPGKEGLTPLLIFNGIGANLEL--VFPFIEALDPD-LEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARML 85 (276)
T ss_pred cCCcEEEEEEecCCCCCCcEEEEeCCCcchHH--HHHHHHHhccC-ceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHH
Confidence 46778887765433 44799999999999864 89999999774 9999999999999986655567889999999999
Q ss_pred HHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc--ccccc---c-c-chhHhhhh-----hcCcc
Q 022960 109 QDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR--GIEGR---L-G-LGYLQRIK-----QNGFI 175 (289)
Q Consensus 109 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~~~---~-~-~~~~~~~~-----~~~~~ 175 (289)
+.+ +.++++|+||||||.+++.+|.++|+ |+++|++++...... ..... . . ..+..... ...+.
T Consensus 86 ~~l---~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T TIGR02240 86 DYL---DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYG 162 (276)
T ss_pred HHh---CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhcc
Confidence 998 77789999999999999999999999 999999998654210 00000 0 0 00000000 00000
Q ss_pred cccccccccccc----cC----hhhhhhhhc-cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEc
Q 022960 176 DVRNKKGKLEYR----VT----QESLMDRLS-TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIE 246 (289)
Q Consensus 176 ~~~~~~~~~~~~----~~----~~~~~~~~~-~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
............ .. ......... .+........++++|+|+++|++|+++|++..+.+.+.++++++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~ 242 (276)
T TIGR02240 163 GAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIID 242 (276)
T ss_pred ceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEc
Confidence 000000000000 00 000000000 000001111256899999999999999999999999999999999998
Q ss_pred CCCcccc-cCchHHHHHHHHHHHhhcCC
Q 022960 247 GADHEFT-SHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 247 ~~gH~~~-~~~~~~~~~i~~fl~~~~~~ 273 (289)
+ ||+++ ++++++++.|.+|+++....
T Consensus 243 ~-gH~~~~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 243 D-GHLFLITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred C-CCchhhccHHHHHHHHHHHHHHhhhh
Confidence 5 99965 66789999999999876543
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=216.32 Aligned_cols=248 Identities=15% Similarity=0.171 Sum_probs=165.8
Q ss_pred ceeeEEeeCCCCceEEEEEeec-CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc------
Q 022960 21 QRRRVVIPNSHGEKLVGILHET-GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL------ 93 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~------ 93 (289)
..++..+...+|.++++..+++ .++++||++||++++... |..++..|.+.||+|+++|+||||.|.....
T Consensus 29 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~--y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 29 QREEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVK--YAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred hccceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHH--HHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 3456777788999999887765 467899999999988753 8889999999999999999999999975421
Q ss_pred ccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhh
Q 022960 94 YGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQ 171 (289)
Q Consensus 94 ~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
..+++.+++|+.++++.+... +..+++++||||||.+++.++..+|+ ++++|+++|......................
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 186 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEG 186 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHH
Confidence 246788899999999887544 56789999999999999999999999 9999999986543211111100000000000
Q ss_pred c-----Cc----cccccccccccc-ccChh---h--------------------hhhhhccchhhhhcccccCceEEEEE
Q 022960 172 N-----GF----IDVRNKKGKLEY-RVTQE---S--------------------LMDRLSTDIHAACHMICQDCRVLTIH 218 (289)
Q Consensus 172 ~-----~~----~~~~~~~~~~~~-~~~~~---~--------------------~~~~~~~~~~~~~~~~~~~~P~l~i~ 218 (289)
. .+ ...........+ ..... . ....+...........++++|+|+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~ 266 (330)
T PRK10749 187 HPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQ 266 (330)
T ss_pred hcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEE
Confidence 0 00 000000000000 00000 0 00000000000011224689999999
Q ss_pred eCCCCccChhhHHHHHhhC-------CCcEEEEEcCCCcccccCc----hHHHHHHHHHHHhh
Q 022960 219 GTKDKMVPAEDALEFDKFI-------PNHKLHIIEGADHEFTSHQ----DELASLVIQFIKAN 270 (289)
Q Consensus 219 g~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~~~----~~~~~~i~~fl~~~ 270 (289)
|++|.+++++.++.+++.+ +++++++++|++|.++.+. +++.+.|.+||+++
T Consensus 267 G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 267 AEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred eCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999999998888765 3468999999999976433 46888899999764
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=214.60 Aligned_cols=232 Identities=17% Similarity=0.213 Sum_probs=157.6
Q ss_pred CCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-------cccchHHHHHH
Q 022960 31 HGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-------LYGNYRREAED 103 (289)
Q Consensus 31 ~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~d 103 (289)
+|.++++...+. ++++|||+||++++... |..+.+.|+++ |+|+++|+||||.|+... ...+++++++|
T Consensus 16 ~~~~i~y~~~G~-~~~~vlllHG~~~~~~~--w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~ 91 (294)
T PLN02824 16 KGYNIRYQRAGT-SGPALVLVHGFGGNADH--WRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQ 91 (294)
T ss_pred cCeEEEEEEcCC-CCCeEEEECCCCCChhH--HHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHH
Confidence 477777544332 46899999999999854 99999999987 799999999999998653 24678899999
Q ss_pred HHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc-----cccccccchhHhhhhh----cC
Q 022960 104 LRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR-----GIEGRLGLGYLQRIKQ----NG 173 (289)
Q Consensus 104 ~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~ 173 (289)
+.++++.+ +.++++++||||||.+++.+|.++|+ |+++|++++...... .........+...+.. ..
T Consensus 92 l~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (294)
T PLN02824 92 LNDFCSDV---VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKA 168 (294)
T ss_pred HHHHHHHh---cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHH
Confidence 99999988 67899999999999999999999999 999999987542110 0000000000000000 00
Q ss_pred c----------ccc----cccccccccc---------cC---hhhhhhhhcc-ch-hhhhcccccCceEEEEEeCCCCcc
Q 022960 174 F----------IDV----RNKKGKLEYR---------VT---QESLMDRLST-DI-HAACHMICQDCRVLTIHGTKDKMV 225 (289)
Q Consensus 174 ~----------~~~----~~~~~~~~~~---------~~---~~~~~~~~~~-~~-~~~~~~~~~~~P~l~i~g~~D~~~ 225 (289)
+ ... .......... .. ...+...... .. .......++++|+|+|+|++|.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 248 (294)
T PLN02824 169 FFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWE 248 (294)
T ss_pred HHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCC
Confidence 0 000 0000000000 00 0001111100 00 001112256999999999999999
Q ss_pred ChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 226 PAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
|.+.++.+.+..+++++++++++||+++ ++++++++.|.+|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 249 PVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9999999888888899999999999966 7788999999999975
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=209.08 Aligned_cols=232 Identities=13% Similarity=0.150 Sum_probs=155.7
Q ss_pred CCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH
Q 022960 31 HGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 31 ~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 110 (289)
+|.+++|.. .+++++|||+||++++.. .|..+++.|.+. ++|+++|+||||.|+.+....++..+++|+.++++.
T Consensus 15 ~g~~i~y~~--~G~g~~vvllHG~~~~~~--~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 15 LGSRMAYIE--TGEGDPIVFLHGNPTSSY--LWRNIIPHLAGL-GRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA 89 (295)
T ss_pred CCEEEEEEE--eCCCCEEEEECCCCCCHH--HHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 677777544 456789999999998884 599999999998 599999999999998766556788999999999998
Q ss_pred HHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc--cccccccchhHhhhhhcCccc--------ccc
Q 022960 111 FCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR--GIEGRLGLGYLQRIKQNGFID--------VRN 179 (289)
Q Consensus 111 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~ 179 (289)
+ +.++++++|||+||.+|+.++.++|+ |+++|++++...... ...... ......+....... ...
T Consensus 90 l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
T PRK03592 90 L---GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAV-RELFQALRSPGEGEEMVLEENVFIE 165 (295)
T ss_pred h---CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhH-HHHHHHHhCcccccccccchhhHHh
Confidence 8 77899999999999999999999999 999999997432110 000000 00011110000000 000
Q ss_pred -ccccc-ccccChh----------------hhhhhhcc--------chh-----hhhcccccCceEEEEEeCCCCccChh
Q 022960 180 -KKGKL-EYRVTQE----------------SLMDRLST--------DIH-----AACHMICQDCRVLTIHGTKDKMVPAE 228 (289)
Q Consensus 180 -~~~~~-~~~~~~~----------------~~~~~~~~--------~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~ 228 (289)
..... ......+ ........ ... ......++++|+|+|+|++|.++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 245 (295)
T PRK03592 166 RVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTG 245 (295)
T ss_pred hcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcH
Confidence 00000 0000000 00000000 000 00111246999999999999999555
Q ss_pred hHHHH-HhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 229 DALEF-DKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 229 ~~~~~-~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
....+ .+..+++++++++++||+++ ++++++++.|.+|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 246 AIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred HHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 55444 55678899999999999976 778899999999998654
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-31 Score=194.90 Aligned_cols=250 Identities=18% Similarity=0.277 Sum_probs=176.7
Q ss_pred ccceeeEEeeCCCCceEEEEEeec----CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-c
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHET----GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-L 93 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~ 93 (289)
.+......+.+.+|.++.+..|.| ..+..|+++||++.... +.+..++..|+..||.|+++|++|||.|++.. .
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s-~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~y 102 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSS-WRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAY 102 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccch-hhHHHHHHHHHhCCCeEEEeeccCCCcCCCCccc
Confidence 344556677888999999888866 35668999999999875 46899999999999999999999999999865 4
Q ss_pred ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccc-cchhHh-
Q 022960 94 YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRL-GLGYLQ- 167 (289)
Q Consensus 94 ~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~-~~~~~~- 167 (289)
..+++..++|+....+.++.+ ...+.+++||||||.+++.++.+.|+ .+++|+++|............ ....+.
T Consensus 103 i~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~ 182 (313)
T KOG1455|consen 103 VPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTL 182 (313)
T ss_pred CCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHH
Confidence 567888999999999987665 34478999999999999999999999 999999999776554432111 111110
Q ss_pred --hhhhcCcccccc-----------------cccccccc--cChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccC
Q 022960 168 --RIKQNGFIDVRN-----------------KKGKLEYR--VTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVP 226 (289)
Q Consensus 168 --~~~~~~~~~~~~-----------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 226 (289)
.+... +..... ......+. .......+.++..........++++|.+++||++|.++.
T Consensus 183 l~~liP~-wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTD 261 (313)
T KOG1455|consen 183 LSKLIPT-WKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTD 261 (313)
T ss_pred HHHhCCc-eeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccC
Confidence 00000 000000 00000000 011122222222222222222569999999999999999
Q ss_pred hhhHHHHHhhCC--CcEEEEEcCCCccccc-Cc----hHHHHHHHHHHHhh
Q 022960 227 AEDALEFDKFIP--NHKLHIIEGADHEFTS-HQ----DELASLVIQFIKAN 270 (289)
Q Consensus 227 ~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-~~----~~~~~~i~~fl~~~ 270 (289)
++.++.+++..+ ++++..|||.-|.++. ++ +.+...|.+||+++
T Consensus 262 p~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 262 PKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999875 5899999999999762 33 45788899999865
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-31 Score=200.65 Aligned_cols=225 Identities=18% Similarity=0.212 Sum_probs=159.1
Q ss_pred eeEEeeCCCCceEEEEEeecC-----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccC-CCCCCCccccc
Q 022960 23 RRVVIPNSHGEKLVGILHETG-----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGN-GESEGSFLYGN 96 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~-----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-G~s~~~~~~~~ 96 (289)
.+..+.+.+|.+|.+|+..|+ +.++||++||+++... .+..+++.|+++||.|+.+|+||+ |.|++.....+
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~--~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t 87 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD--HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFT 87 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH--HHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCc
Confidence 455677889999999998874 4579999999999874 389999999999999999999988 99988775555
Q ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCccc
Q 022960 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID 176 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (289)
......|+.++++++++++.+++.|+||||||.+|+..|.. ++++++|+.+|..++...+.......+. ..+...
T Consensus 88 ~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~-~~v~~lI~~sp~~~l~d~l~~~~~~~~~----~~p~~~ 162 (307)
T PRK13604 88 MSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINE-IDLSFLITAVGVVNLRDTLERALGYDYL----SLPIDE 162 (307)
T ss_pred ccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcC-CCCCEEEEcCCcccHHHHHHHhhhcccc----cCcccc
Confidence 55568999999999988877899999999999999776653 3499999999987765333221111100 000000
Q ss_pred ccccccccccccC-hhhhhhhhccchh------hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC--CcEEEEEcC
Q 022960 177 VRNKKGKLEYRVT-QESLMDRLSTDIH------AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP--NHKLHIIEG 247 (289)
Q Consensus 177 ~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~ 247 (289)
............. ...+...+..++. .... .+++|+|+|||++|.+||.+.++.+++.++ +++++.++|
T Consensus 163 lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~--~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~G 240 (307)
T PRK13604 163 LPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMK--GLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIG 240 (307)
T ss_pred cccccccccccccHHHHHHHHHhcCccccccHHHHHh--hcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCC
Confidence 0000000001111 1111111111111 1122 347999999999999999999999999875 689999999
Q ss_pred CCcccccCc
Q 022960 248 ADHEFTSHQ 256 (289)
Q Consensus 248 ~gH~~~~~~ 256 (289)
++|.+.+..
T Consensus 241 a~H~l~~~~ 249 (307)
T PRK13604 241 SSHDLGENL 249 (307)
T ss_pred CccccCcch
Confidence 999986543
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-31 Score=204.21 Aligned_cols=218 Identities=21% Similarity=0.219 Sum_probs=148.6
Q ss_pred EEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHHHHHHHhcCC-ceEEEEEe
Q 022960 47 LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAIVQDFCAKGR-VITAIIGH 124 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~~l~~~~~-~~~~l~G~ 124 (289)
+|||+||++.+.. .|..+++.|.+.||+|+++|+||||.|..... ..+++.+++|+.++++.+ +. ++++++||
T Consensus 5 ~vvllHG~~~~~~--~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASHGAW--CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL---PPDHKVILVGH 79 (255)
T ss_pred EEEEECCCCCCcC--cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc---CCCCCEEEEec
Confidence 5999999998874 59999999988899999999999999976543 456788899999999987 55 48999999
Q ss_pred ChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc-cccccchhHhh---hhhcCcccccccc-------c-c---ccccc
Q 022960 125 SKGGNAVLLYASKYND-ISIVINISGRFNLKRGI-EGRLGLGYLQR---IKQNGFIDVRNKK-------G-K---LEYRV 188 (289)
Q Consensus 125 S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~-------~-~---~~~~~ 188 (289)
||||.+++.++.++|+ |+++|++++........ ..... ..... .....+....... . . ..+..
T Consensus 80 SmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (255)
T PLN02965 80 SIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLK-NVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQ 158 (255)
T ss_pred CcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHH-hhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcC
Confidence 9999999999999999 99999998753211000 00000 00000 0000000000000 0 0 00000
Q ss_pred -Chh--hh-hhhhcc-------chh-hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cC
Q 022960 189 -TQE--SL-MDRLST-------DIH-AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SH 255 (289)
Q Consensus 189 -~~~--~~-~~~~~~-------~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~ 255 (289)
... .. ...+.. ... .......+++|+++++|++|.++|++..+.+.+.++++++++++++||+++ ++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~ 238 (255)
T PLN02965 159 SPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSV 238 (255)
T ss_pred CCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcC
Confidence 000 00 000000 000 000111469999999999999999999999999999999999999999966 77
Q ss_pred chHHHHHHHHHHHhh
Q 022960 256 QDELASLVIQFIKAN 270 (289)
Q Consensus 256 ~~~~~~~i~~fl~~~ 270 (289)
++++++.|.+|++..
T Consensus 239 p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 239 PTTLFQYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHHHHHHHh
Confidence 899999999998764
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-31 Score=212.68 Aligned_cols=250 Identities=16% Similarity=0.172 Sum_probs=159.2
Q ss_pred cCCcccceeeEEeeC---CCCceEEEEEeecCC-------CcEEEEEcCCCCCCCCcchH--HHHHHH-------HHcCc
Q 022960 15 QQDPVVQRRRVVIPN---SHGEKLVGILHETGS-------KQLVIVCHGFQSTKDRIPMV--NLAAAL-------EREGI 75 (289)
Q Consensus 15 ~~~~~~~~~~~~~~~---~~g~~l~~~~~~~~~-------~~~iv~~hG~~~~~~~~~~~--~~~~~l-------~~~G~ 75 (289)
+.+.....+++.+.+ .+|.+++|...+.++ +|+|||+||++++... |. .+.+.| ...+|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~--~~~~~~~~~l~~~~~~l~~~~~ 106 (360)
T PRK06489 29 PQEGDWVARDFTFHSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS--FLSPTFAGELFGPGQPLDASKY 106 (360)
T ss_pred CccCceeccceeccCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh--hccchhHHHhcCCCCcccccCC
Confidence 444555666677766 466777766555444 7899999999998754 43 455554 13469
Q ss_pred cEEEEccccCCCCCCCcc-------ccchHHHHHHHHHHH-HHHHhcCCceEE-EEEeChhHHHHHHHHHhCCC-ccEEE
Q 022960 76 SAFRFDFSGNGESEGSFL-------YGNYRREAEDLRAIV-QDFCAKGRVITA-IIGHSKGGNAVLLYASKYND-ISIVI 145 (289)
Q Consensus 76 ~v~~~d~~G~G~s~~~~~-------~~~~~~~~~d~~~~i-~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~-v~~~v 145 (289)
+|+++|+||||.|+.+.. .+++++.++++.+++ +.+ ++++++ |+||||||.+|+.+|.++|+ |+++|
T Consensus 107 ~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~l---gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LV 183 (360)
T PRK06489 107 FIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGL---GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALM 183 (360)
T ss_pred EEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhc---CCCceeEEEEECHHHHHHHHHHHhCchhhheee
Confidence 999999999999976432 246677777776654 556 777875 89999999999999999999 99999
Q ss_pred EeccCCcccccccccccchhHhhhhhc------Cccc----------------------c--ccccccc---c-------
Q 022960 146 NISGRFNLKRGIEGRLGLGYLQRIKQN------GFID----------------------V--RNKKGKL---E------- 185 (289)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----------------------~--~~~~~~~---~------- 185 (289)
++++...................+... .+.. . ....... .
T Consensus 184 Li~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T PRK06489 184 PMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAA 263 (360)
T ss_pred eeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHh
Confidence 998743211000000000000000000 0000 0 0000000 0
Q ss_pred -cccChhhhhhhhc----cchhhhhcccccCceEEEEEeCCCCccChhhH--HHHHhhCCCcEEEEEcCC----Cccccc
Q 022960 186 -YRVTQESLMDRLS----TDIHAACHMICQDCRVLTIHGTKDKMVPAEDA--LEFDKFIPNHKLHIIEGA----DHEFTS 254 (289)
Q Consensus 186 -~~~~~~~~~~~~~----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~----gH~~~~ 254 (289)
.......+...+. .+... ...+|++|+|+|+|++|.++|++.+ +.+.+.+|++++++++++ ||.+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~d~~~--~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~e 341 (360)
T PRK06489 264 PVTADANDFLYQWDSSRDYNPSP--DLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTTG 341 (360)
T ss_pred hhhcCHHHHHHHHHHhhccChHH--HHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCccccc
Confidence 0000000000000 01111 1125699999999999999998875 789999999999999996 999888
Q ss_pred CchHHHHHHHHHHHhhc
Q 022960 255 HQDELASLVIQFIKANY 271 (289)
Q Consensus 255 ~~~~~~~~i~~fl~~~~ 271 (289)
+++++++.|.+||++..
T Consensus 342 ~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 342 SAKFWKAYLAEFLAQVP 358 (360)
T ss_pred CHHHHHHHHHHHHHhcc
Confidence 88999999999998653
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.3e-31 Score=206.31 Aligned_cols=225 Identities=19% Similarity=0.220 Sum_probs=145.6
Q ss_pred EeecCCCcEEEEEcCCCCCCCCcchHH---HHHHHHHcCccEEEEccccCCCCCCCccc-cchHHHHHHHHHHHHHHHhc
Q 022960 39 LHETGSKQLVIVCHGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGESEGSFLY-GNYRREAEDLRAIVQDFCAK 114 (289)
Q Consensus 39 ~~~~~~~~~iv~~hG~~~~~~~~~~~~---~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-~~~~~~~~d~~~~i~~l~~~ 114 (289)
|...+++|+||++||++++... |.. ....|.+.||+|+++|+||||.|+..... ......++|+.++++.+
T Consensus 24 y~~~g~~~~ivllHG~~~~~~~--~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l--- 98 (282)
T TIGR03343 24 YNEAGNGEAVIMLHGGGPGAGG--WSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL--- 98 (282)
T ss_pred EEecCCCCeEEEECCCCCchhh--HHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc---
Confidence 4455677899999999987754 443 34566667899999999999999865321 11124578888888887
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc---ccchhHhh-----------hhhcCcccccc
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR---LGLGYLQR-----------IKQNGFIDVRN 179 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~---~~~~~~~~-----------~~~~~~~~~~~ 179 (289)
+.++++++||||||.+++.++.++|+ ++++|++++........... ....+... ...........
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSL 178 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCccc
Confidence 78899999999999999999999998 99999998753211100000 00000000 00000000000
Q ss_pred cccc---ccc---ccChhhhhhhhc-------cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEc
Q 022960 180 KKGK---LEY---RVTQESLMDRLS-------TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIE 246 (289)
Q Consensus 180 ~~~~---~~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
.... ..+ ............ ..........++++|+|+++|++|.+++++.++.+++.++++++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~ 258 (282)
T TIGR03343 179 ITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFS 258 (282)
T ss_pred CcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeC
Confidence 0000 000 000000000000 000001112256899999999999999999999999999999999999
Q ss_pred CCCcccc-cCchHHHHHHHHHHH
Q 022960 247 GADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 247 ~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
++||+++ ++++++++.|.+||+
T Consensus 259 ~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 259 RCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CCCcCCcccCHHHHHHHHHHHhh
Confidence 9999966 667889999999986
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-30 Score=203.54 Aligned_cols=234 Identities=20% Similarity=0.221 Sum_probs=158.3
Q ss_pred CCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHH
Q 022960 29 NSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAI 107 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~ 107 (289)
..+|.++++.-.++..+|+||++||++++... |..+.+.|++ +|+|+++|+||||.|..+.. ..++..+++|+.++
T Consensus 12 ~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~--~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 88 (278)
T TIGR03056 12 TVGPFHWHVQDMGPTAGPLLLLLHGTGASTHS--WRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSAL 88 (278)
T ss_pred eECCEEEEEEecCCCCCCeEEEEcCCCCCHHH--HHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHH
Confidence 44677777655555467899999999998854 8899999987 59999999999999986554 56788889999999
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhH-------------hhhhh--
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYL-------------QRIKQ-- 171 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-- 171 (289)
++.+ +.++++|+||||||.+++.++.++|+ ++++|++++................. .....
T Consensus 89 i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (278)
T TIGR03056 89 CAAE---GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQ 165 (278)
T ss_pred HHHc---CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccC
Confidence 8876 66789999999999999999999999 99999998765322111000000000 00000
Q ss_pred cCcccccccccccccccChhhhh-------------hhhcc-chh-hhhcccccCceEEEEEeCCCCccChhhHHHHHhh
Q 022960 172 NGFIDVRNKKGKLEYRVTQESLM-------------DRLST-DIH-AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKF 236 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 236 (289)
....................... ..+.. ... ......++++|+++++|++|.++|.+..+.+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~ 245 (278)
T TIGR03056 166 QRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATR 245 (278)
T ss_pred cchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHh
Confidence 00000000000000000000000 00000 000 0011124689999999999999999999999999
Q ss_pred CCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 237 IPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 237 ~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
+++++++.++++||+++ +.++++++.|.+|++
T Consensus 246 ~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 246 VPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred ccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999966 677899999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=201.75 Aligned_cols=218 Identities=20% Similarity=0.227 Sum_probs=149.5
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAII 122 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~ 122 (289)
+++|+||++||++++... |..++..|.+ +|+|+++|+||||.|.... ..++.++++|+.++++++ +.++++|+
T Consensus 14 ~~~~~iv~lhG~~~~~~~--~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~-~~~~~~~~~d~~~~l~~l---~~~~~~lv 86 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDN--LGVLARDLVN-DHDIIQVDMRNHGLSPRDP-VMNYPAMAQDLLDTLDAL---QIEKATFI 86 (255)
T ss_pred CCCCCEEEECCCCCchhH--HHHHHHHHhh-CCeEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHc---CCCceEEE
Confidence 467899999999998854 8899999987 4999999999999998654 357888999999999988 77789999
Q ss_pred EeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc-cccccccchhHhhhhhcCcc----------ccccc----------
Q 022960 123 GHSKGGNAVLLYASKYND-ISIVINISGRFNLKR-GIEGRLGLGYLQRIKQNGFI----------DVRNK---------- 180 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~---------- 180 (289)
||||||.+++.+|.++|+ |+++|++++...... ......... .......... .....
T Consensus 87 GhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (255)
T PRK10673 87 GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAA-INAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKS 165 (255)
T ss_pred EECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHH-HHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhc
Confidence 999999999999999998 999999865321110 000000000 0000000000 00000
Q ss_pred ccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHH
Q 022960 181 KGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDEL 259 (289)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~ 259 (289)
.....+............. .........+++|+|+|+|++|..++.+..+.+.+.++++++.+++++||+++ ++++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 244 (255)
T PRK10673 166 FVDGEWRFNVPVLWDQYPH-IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAV 244 (255)
T ss_pred CCcceeEeeHHHHHHhHHH-HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHH
Confidence 0000000011100000000 00000112458999999999999999999999999999999999999999966 567889
Q ss_pred HHHHHHHHHh
Q 022960 260 ASLVIQFIKA 269 (289)
Q Consensus 260 ~~~i~~fl~~ 269 (289)
++.|.+||++
T Consensus 245 ~~~l~~fl~~ 254 (255)
T PRK10673 245 LRAIRRYLND 254 (255)
T ss_pred HHHHHHHHhc
Confidence 9999999975
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-31 Score=185.72 Aligned_cols=215 Identities=24% Similarity=0.339 Sum_probs=158.0
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeC
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S 125 (289)
.+|+++||+.|+.+. .+.+.+.|.++||.|.++.+||||......-..++.+|.+|+.+..++|.+.+.+.|.++|.|
T Consensus 16 ~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 16 RAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred EEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 789999999999976 999999999999999999999999998777778889999999999999998899999999999
Q ss_pred hhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccc----cccccc----cChhhhhhhh
Q 022960 126 KGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKK----GKLEYR----VTQESLMDRL 197 (289)
Q Consensus 126 ~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~ 197 (289)
|||.+++.+|..+| ++++|.+|++......- ..-..+...+............ ....+. .....+.. +
T Consensus 94 mGGv~alkla~~~p-~K~iv~m~a~~~~k~~~--~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~-~ 169 (243)
T COG1647 94 MGGVFALKLAYHYP-PKKIVPMCAPVNVKSWR--IIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKK-L 169 (243)
T ss_pred chhHHHHHHHhhCC-ccceeeecCCcccccch--hhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHH-H
Confidence 99999999999998 99999999876533211 1111112111111000000000 000000 00011111 1
Q ss_pred ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC--CcEEEEEcCCCccccc--CchHHHHHHHHHHH
Q 022960 198 STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP--NHKLHIIEGADHEFTS--HQDELASLVIQFIK 268 (289)
Q Consensus 198 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~--~~~~~~~~i~~fl~ 268 (289)
..+...... .|..|++++.|.+|+.+|.+.+..+++... +.++.+++++||.+.. +.+++.+.+..||+
T Consensus 170 i~~~~~~~~--~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 170 IKDARRSLD--KIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred HHHHHhhhh--hcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 111122222 458999999999999999999999998874 4799999999999763 45789999999996
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=207.25 Aligned_cols=232 Identities=16% Similarity=0.220 Sum_probs=151.9
Q ss_pred Cc-eEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHH
Q 022960 32 GE-KLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLR 105 (289)
Q Consensus 32 g~-~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~ 105 (289)
|. +++|...+++ .+|+|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|+.+. ...++..+++++.
T Consensus 70 g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~--~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~ 146 (360)
T PLN02679 70 GEYSINYLVKGSPEVTSSGPPVLLVHGFGASIP--HWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELIL 146 (360)
T ss_pred CceeEEEEEecCcccCCCCCeEEEECCCCCCHH--HHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHH
Confidence 44 7776555544 4589999999999885 49999999987 6999999999999998654 2457788899999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHh-CCC-ccEEEEeccCCccccc-cccc-----ccc--hhHhh-------
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASK-YND-ISIVINISGRFNLKRG-IEGR-----LGL--GYLQR------- 168 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~-v~~~v~~~~~~~~~~~-~~~~-----~~~--~~~~~------- 168 (289)
++++.+ +.++++|+||||||.+++.++.. +|+ |+++|++++....... .... ... .+...
T Consensus 147 ~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (360)
T PLN02679 147 DFLEEV---VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGI 223 (360)
T ss_pred HHHHHh---cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhh
Confidence 999887 77799999999999999998874 688 9999999875322100 0000 000 00000
Q ss_pred ---hhh-----cCcc----cccccccccc------------cccChhhhhhhhcc--chhhhhcccccCceEEEEEeCCC
Q 022960 169 ---IKQ-----NGFI----DVRNKKGKLE------------YRVTQESLMDRLST--DIHAACHMICQDCRVLTIHGTKD 222 (289)
Q Consensus 169 ---~~~-----~~~~----~~~~~~~~~~------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D 222 (289)
+.. ..+. .......... .......+...... .........++++|+|+++|++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D 303 (360)
T PLN02679 224 ASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQD 303 (360)
T ss_pred HHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCC
Confidence 000 0000 0000000000 00000011111100 00000111246899999999999
Q ss_pred CccChhh-----HHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 223 KMVPAED-----ALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 223 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
.++|++. .+.+.+.++++++++++++||+++ +.++++++.|.+||++
T Consensus 304 ~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 304 PFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 9998763 345667789999999999999976 6678999999999975
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-30 Score=191.71 Aligned_cols=241 Identities=18% Similarity=0.231 Sum_probs=165.4
Q ss_pred eEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc--ccchHHHH
Q 022960 24 RVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL--YGNYRREA 101 (289)
Q Consensus 24 ~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~ 101 (289)
+..+.+.+|.++++...+++.+|.|+++||++...-+ |+.....|+.+||+|+++|+||+|.|+.+.. .++....+
T Consensus 23 ~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wys--wr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~ 100 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYS--WRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELV 100 (322)
T ss_pred ceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchh--hhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHH
Confidence 3344444567777666677799999999999999854 9999999999999999999999999998764 66788899
Q ss_pred HHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc-----ccccccccchhH---------
Q 022960 102 EDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK-----RGIEGRLGLGYL--------- 166 (289)
Q Consensus 102 ~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~-----~~~~~~~~~~~~--------- 166 (289)
.|+..+++.| +.++++++||++|+.+|+.+|..+|+ |+++|+++.+.... ..........+.
T Consensus 101 ~di~~lld~L---g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~ 177 (322)
T KOG4178|consen 101 GDIVALLDHL---GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGK 177 (322)
T ss_pred HHHHHHHHHh---ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCc
Confidence 9999999999 78899999999999999999999999 99999998765411 000000000000
Q ss_pred --------------hhhhhcCcc--ccccc--ccccccccChhhh------------------hhhhccchh-hhhcccc
Q 022960 167 --------------QRIKQNGFI--DVRNK--KGKLEYRVTQESL------------------MDRLSTDIH-AACHMIC 209 (289)
Q Consensus 167 --------------~~~~~~~~~--~~~~~--~~~~~~~~~~~~~------------------~~~~~~~~~-~~~~~~~ 209 (289)
..+...... ..... .....| .+.+.+ .+.+...+. ......+
T Consensus 178 ~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w-~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~ 256 (322)
T KOG4178|consen 178 PETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLW-LTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAK 256 (322)
T ss_pred chhhhccchhHHhHHhhhccccCCccccCCCCCCccch-hhHHHHHHHHhccccccccccchhhHHHhhCchhccccccc
Confidence 000000000 00000 000000 011110 011111110 1112235
Q ss_pred cCceEEEEEeCCCCccChh-hHHHHHhhCCCc-EEEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 210 QDCRVLTIHGTKDKMVPAE-DALEFDKFIPNH-KLHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 210 ~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
+++|+++++|+.|.+.+.. ....+.+..++. +.++++|+||+.+ ++++++++.|.+|+++.
T Consensus 257 i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 257 ITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 6899999999999998866 445556666764 8899999999976 77889999999999875
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=196.72 Aligned_cols=250 Identities=22% Similarity=0.304 Sum_probs=171.5
Q ss_pred ceeeEEeeCCCCceEEEEEeecC-C-CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCC-CC-ccccc
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG-S-KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESE-GS-FLYGN 96 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~-~-~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~-~~-~~~~~ 96 (289)
...+..+...||..+.++.+.+. + ..+||++||++.+... |..++..|..+||.|+++|+||||.|. +. ....+
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~r--y~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGR--YEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHH--HHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 34566778889999998887665 3 3799999999999965 889999999999999999999999997 33 34556
Q ss_pred hHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc--cc--cccccchhHhhhh
Q 022960 97 YRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR--GI--EGRLGLGYLQRIK 170 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~--~~~~~~~~~~~~~ 170 (289)
+.++.+|+.++++.+... ...+++++||||||.+++.++.+++. ++++|+.+|.+.... .. ...........+.
T Consensus 86 f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIR 165 (298)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccc
Confidence 888999999999998764 45689999999999999999999987 999999999887763 00 0000000000000
Q ss_pred hc-CcccccccccccccccChhhhhhhhccc-------------------h--hhhhcccccCceEEEEEeCCCCccC-h
Q 022960 171 QN-GFIDVRNKKGKLEYRVTQESLMDRLSTD-------------------I--HAACHMICQDCRVLTIHGTKDKMVP-A 227 (289)
Q Consensus 171 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~--~~~~~~~~~~~P~l~i~g~~D~~~~-~ 227 (289)
.. .+....................+.+..+ . ........+++|+|+++|++|.+++ .
T Consensus 166 p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~ 245 (298)
T COG2267 166 PKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNV 245 (298)
T ss_pred cccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCc
Confidence 00 0000000000000000001111111110 0 0111123568999999999999999 6
Q ss_pred hhHHHHHhhC--CCcEEEEEcCCCcccccCc----hHHHHHHHHHHHhhcC
Q 022960 228 EDALEFDKFI--PNHKLHIIEGADHEFTSHQ----DELASLVIQFIKANYQ 272 (289)
Q Consensus 228 ~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~----~~~~~~i~~fl~~~~~ 272 (289)
+...++.+.. +++++++++|+.|..+.++ +++.+.+.+|+.+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 246 EGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 7777777665 4679999999999977543 5688888888887653
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=206.04 Aligned_cols=230 Identities=17% Similarity=0.232 Sum_probs=154.6
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~ 109 (289)
.+|.+++|. ..+++++||++||++++.. .|..+.+.|++ +|+|+++|+||||.|+++...++...+++++.++++
T Consensus 73 ~~~~~i~Y~--~~g~g~~vvliHG~~~~~~--~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~ 147 (354)
T PLN02578 73 WRGHKIHYV--VQGEGLPIVLIHGFGASAF--HWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVK 147 (354)
T ss_pred ECCEEEEEE--EcCCCCeEEEECCCCCCHH--HHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 346667644 4456789999999999874 48889999986 499999999999999887666677788889999888
Q ss_pred HHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc----------cccc----ch---hHhhhhh
Q 022960 110 DFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE----------GRLG----LG---YLQRIKQ 171 (289)
Q Consensus 110 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~----------~~~~----~~---~~~~~~~ 171 (289)
.+ ..++++++|||+||.+++.+|.++|+ |+++|++++......... .... .. .......
T Consensus 148 ~~---~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (354)
T PLN02578 148 EV---VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVL 224 (354)
T ss_pred Hh---ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHH
Confidence 87 56789999999999999999999999 999999976432211000 0000 00 0000000
Q ss_pred -------c-------Cccc-cccccccccc--------cc---Chhhhhhhhc------cchhhhhcccccCceEEEEEe
Q 022960 172 -------N-------GFID-VRNKKGKLEY--------RV---TQESLMDRLS------TDIHAACHMICQDCRVLTIHG 219 (289)
Q Consensus 172 -------~-------~~~~-~~~~~~~~~~--------~~---~~~~~~~~~~------~~~~~~~~~~~~~~P~l~i~g 219 (289)
. .... .........+ .. ....+...+. ..........++++|+++++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G 304 (354)
T PLN02578 225 GFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWG 304 (354)
T ss_pred HHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEe
Confidence 0 0000 0000000000 00 0000010000 000001111246999999999
Q ss_pred CCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 220 TKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 220 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
++|.++|.+.++.+.+.+++++++.+ ++||+++ ++++++++.|.+|++
T Consensus 305 ~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 305 DLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 99999999999999999999999999 5899976 677899999999985
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-30 Score=207.98 Aligned_cols=238 Identities=18% Similarity=0.222 Sum_probs=155.3
Q ss_pred eeCCCCceEEEEEeecCC---CcEEEEEcCCCCCCCCcchHH-HHHHHH---HcCccEEEEccccCCCCCCCc-cccchH
Q 022960 27 IPNSHGEKLVGILHETGS---KQLVIVCHGFQSTKDRIPMVN-LAAALE---REGISAFRFDFSGNGESEGSF-LYGNYR 98 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~---~~~iv~~hG~~~~~~~~~~~~-~~~~l~---~~G~~v~~~d~~G~G~s~~~~-~~~~~~ 98 (289)
+.+.++.++++...++.. +++|||+||++++... |.. +.+.|. +.+|+|+++|+||||.|+.+. ..++++
T Consensus 180 ~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~--W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~ 257 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAF--WTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLR 257 (481)
T ss_pred eEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHH--HHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHH
Confidence 333456788877776643 5799999999998853 764 445655 358999999999999998653 335677
Q ss_pred HHHHHHH-HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc---cc-----c-----
Q 022960 99 REAEDLR-AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR---LG-----L----- 163 (289)
Q Consensus 99 ~~~~d~~-~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~---~~-----~----- 163 (289)
++++++. .+++.+ +.++++++||||||.+++.++.++|+ |+++|+++++.......... .. .
T Consensus 258 ~~a~~l~~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (481)
T PLN03087 258 EHLEMIERSVLERY---KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPP 334 (481)
T ss_pred HHHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCc
Confidence 8888884 677776 78899999999999999999999999 99999998754322110000 00 0
Q ss_pred --------hhHhhhhhcC---------ccc----cccccccccccc------C-h---hhhhhhhcc-----chhhhhcc
Q 022960 164 --------GYLQRIKQNG---------FID----VRNKKGKLEYRV------T-Q---ESLMDRLST-----DIHAACHM 207 (289)
Q Consensus 164 --------~~~~~~~~~~---------~~~----~~~~~~~~~~~~------~-~---~~~~~~~~~-----~~~~~~~~ 207 (289)
.+........ ... ............ . . ..+...+.. +.......
T Consensus 335 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~ 414 (481)
T PLN03087 335 IAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVR 414 (481)
T ss_pred cccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHH
Confidence 0000000000 000 000000000000 0 0 000000000 00000001
Q ss_pred cccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc--cCchHHHHHHHHHHHh
Q 022960 208 ICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT--SHQDELASLVIQFIKA 269 (289)
Q Consensus 208 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~ 269 (289)
.++++|+|+++|++|.++|++..+.+++.+|++++++++++||..+ ++++++++.|.+|.+.
T Consensus 415 ~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 415 DQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 1468999999999999999999999999999999999999999954 6789999999999854
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-29 Score=201.69 Aligned_cols=249 Identities=16% Similarity=0.260 Sum_probs=166.2
Q ss_pred ceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccc
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGN 96 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~ 96 (289)
......+...++..+.+..+.+. .+++||++||++++.. .|..+++.|+++||+|+++|+||||.|.+... ..+
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~--~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 186 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSG--RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPS 186 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHH--HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcC
Confidence 34566777788888888877663 4579999999998874 48899999999999999999999999987543 346
Q ss_pred hHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCC---C-ccEEEEeccCCcccccccc-cccchhHhhhh
Q 022960 97 YRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYN---D-ISIVINISGRFNLKRGIEG-RLGLGYLQRIK 170 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 170 (289)
++...+|+.++++++... ...+++++||||||.+++.++. +| + ++++|+.+|.......... .........+.
T Consensus 187 ~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 187 LDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 677889999999999765 3347999999999999998764 44 3 8999999987643321100 00000011110
Q ss_pred hcC-ccccccc------c---------cccccc--cChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHH
Q 022960 171 QNG-FIDVRNK------K---------GKLEYR--VTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE 232 (289)
Q Consensus 171 ~~~-~~~~~~~------~---------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 232 (289)
... +...... . ....+. .....................++++|+|+++|++|.++|++.++.
T Consensus 266 p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 266 PRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred CCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 000 0000000 0 000000 000000000000000011123568999999999999999999999
Q ss_pred HHhhCC--CcEEEEEcCCCcccc-c-CchHHHHHHHHHHHhhcC
Q 022960 233 FDKFIP--NHKLHIIEGADHEFT-S-HQDELASLVIQFIKANYQ 272 (289)
Q Consensus 233 ~~~~~~--~~~~~~~~~~gH~~~-~-~~~~~~~~i~~fl~~~~~ 272 (289)
+++..+ +++++.+++++|..+ + +++++.+.+.+||+.++.
T Consensus 346 l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 346 LYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 988865 478999999999965 3 457899999999998774
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=198.33 Aligned_cols=218 Identities=17% Similarity=0.275 Sum_probs=149.4
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
.++|+||++||++++.. .|..+++.|.+ ||+|+++|+||||.|.... ...+++++++++.++++.+ +.+++++
T Consensus 11 ~~~~~iv~lhG~~~~~~--~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~l 84 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGS--YWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL---NIERFHF 84 (257)
T ss_pred CCCCEEEEEcCCCcchh--HHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh---CCCcEEE
Confidence 35789999999999885 48888888876 6999999999999997643 3457788889999999887 6778999
Q ss_pred EEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc--chhHhhhhhcCccc----------ccccc-------
Q 022960 122 IGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG--LGYLQRIKQNGFID----------VRNKK------- 181 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----------~~~~~------- 181 (289)
+||||||.+++.++..+|+ ++++|++++............. ..+........+.. .....
T Consensus 85 ~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (257)
T TIGR03611 85 VGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAAD 164 (257)
T ss_pred EEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhh
Confidence 9999999999999999998 9999999875443211100000 00000000000000 00000
Q ss_pred -ccccccc-Chhhhhhh----hccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-c
Q 022960 182 -GKLEYRV-TQESLMDR----LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-S 254 (289)
Q Consensus 182 -~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~ 254 (289)
....... ........ ...+.... ...+++|+++++|++|.++|++.++.+++.+++++++.++++||.++ +
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 242 (257)
T TIGR03611 165 EAHALAHFPGKANVLRRINALEAFDVSAR--LDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVT 242 (257)
T ss_pred hhhcccccCccHHHHHHHHHHHcCCcHHH--hcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCcccc
Confidence 0000000 00000000 01111111 12458999999999999999999999999999999999999999965 6
Q ss_pred CchHHHHHHHHHHH
Q 022960 255 HQDELASLVIQFIK 268 (289)
Q Consensus 255 ~~~~~~~~i~~fl~ 268 (289)
+++++++.|.+||+
T Consensus 243 ~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 243 DPETFNRALLDFLK 256 (257)
T ss_pred CHHHHHHHHHHHhc
Confidence 77889999999985
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=198.19 Aligned_cols=237 Identities=16% Similarity=0.177 Sum_probs=152.3
Q ss_pred eeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHH
Q 022960 22 RRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRRE 100 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~ 100 (289)
.+...++. +|.++++. ..|++++|||+||++.+.. .|..+.+.|.+. |+|+++|+||||.|+.+.. ..+....
T Consensus 14 ~~~~~~~~-~~~~i~y~--~~G~~~~iv~lHG~~~~~~--~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~ 87 (286)
T PRK03204 14 FESRWFDS-SRGRIHYI--DEGTGPPILLCHGNPTWSF--LYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQIDEH 87 (286)
T ss_pred ccceEEEc-CCcEEEEE--ECCCCCEEEEECCCCccHH--HHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCHHHH
Confidence 33444444 56677744 4456789999999987663 488899999764 9999999999999986543 3456777
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccc----------cch-----
Q 022960 101 AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRL----------GLG----- 164 (289)
Q Consensus 101 ~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~----------~~~----- 164 (289)
++++.++++.+ +.++++++||||||.+++.++..+|+ |+++|++++............ ...
T Consensus 88 ~~~~~~~~~~~---~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
T PRK03204 88 ARVIGEFVDHL---GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRN 164 (286)
T ss_pred HHHHHHHHHHh---CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhh
Confidence 88888888877 77889999999999999999999998 999999876532111100000 000
Q ss_pred -hHhhhhhcCccccccccccccc-cc--C---hhhhh---hhhccc--hhh----hhcccccCceEEEEEeCCCCccChh
Q 022960 165 -YLQRIKQNGFIDVRNKKGKLEY-RV--T---QESLM---DRLSTD--IHA----ACHMICQDCRVLTIHGTKDKMVPAE 228 (289)
Q Consensus 165 -~~~~~~~~~~~~~~~~~~~~~~-~~--~---~~~~~---~~~~~~--~~~----~~~~~~~~~P~l~i~g~~D~~~~~~ 228 (289)
+...+................+ .. . ...+. ..+... ... ......+++|+++|+|++|.++++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~ 244 (286)
T PRK03204 165 FFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPK 244 (286)
T ss_pred HHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcH
Confidence 0000000000000000000000 00 0 00000 000000 000 0001112799999999999988654
Q ss_pred -hHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHH
Q 022960 229 -DALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFI 267 (289)
Q Consensus 229 -~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl 267 (289)
..+.+.+.+++.++++++++||+++ +.|+++++.|.+||
T Consensus 245 ~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 245 TILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 5788999999999999999999976 66789999999997
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=200.48 Aligned_cols=235 Identities=15% Similarity=0.189 Sum_probs=159.9
Q ss_pred eeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc----ccchHHHHH
Q 022960 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL----YGNYRREAE 102 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~----~~~~~~~~~ 102 (289)
....+|.++++...+++++++|||+||++.+.. .|+.+++.|++ +|+|+++|+||||.|+.+.. ..++..+++
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~--~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~ 185 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAY--SYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVS 185 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHH--HHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHH
Confidence 334678888866666667899999999999885 49999999986 69999999999999987643 357888999
Q ss_pred HHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc-ccccc---ccchhHhhhhh------
Q 022960 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR-GIEGR---LGLGYLQRIKQ------ 171 (289)
Q Consensus 103 d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-~~~~~---~~~~~~~~~~~------ 171 (289)
++.++++.+ +.++++|+|||+||.+++.++..+|+ |+++|++++...... ..... +.......+..
T Consensus 186 ~l~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~ 262 (383)
T PLN03084 186 SLESLIDEL---KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRA 262 (383)
T ss_pred HHHHHHHHh---CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHH
Confidence 999999988 77789999999999999999999999 999999998753211 00000 00000000000
Q ss_pred --cCccccccc----cccccc------c----cChhhhhhhhccch---hhhh----cccccCceEEEEEeCCCCccChh
Q 022960 172 --NGFIDVRNK----KGKLEY------R----VTQESLMDRLSTDI---HAAC----HMICQDCRVLTIHGTKDKMVPAE 228 (289)
Q Consensus 172 --~~~~~~~~~----~~~~~~------~----~~~~~~~~~~~~~~---~~~~----~~~~~~~P~l~i~g~~D~~~~~~ 228 (289)
..+...... .....+ . .....+...+.... .... ...++++|+++++|++|.+++.+
T Consensus 263 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~ 342 (383)
T PLN03084 263 SDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYD 342 (383)
T ss_pred HhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHH
Confidence 000000000 000000 0 00000011111100 0001 11246899999999999999999
Q ss_pred hHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 229 DALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
..+.+++. +++++.+++++||+++ +.++++++.|.+||.
T Consensus 343 ~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 343 GVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 88888887 5889999999999976 567899999999985
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=194.21 Aligned_cols=226 Identities=16% Similarity=0.218 Sum_probs=151.7
Q ss_pred EEEEEeecC-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHh
Q 022960 35 LVGILHETG-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCA 113 (289)
Q Consensus 35 l~~~~~~~~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~ 113 (289)
+++...+++ ++|+||++||++.+.. .|..+++.|.+ ||+|+++|+||||.|.......++.++++|+.++++.+
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~--~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~-- 76 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLR--MWDPVLPALTP-DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL-- 76 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchh--hHHHHHHHhhc-ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Confidence 344444444 6789999999998885 48889988874 79999999999999976655667888899999999887
Q ss_pred cCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc--ccccc---c----chhHhhhhhcCcccccccccc
Q 022960 114 KGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG--IEGRL---G----LGYLQRIKQNGFIDVRNKKGK 183 (289)
Q Consensus 114 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~--~~~~~---~----~~~~~~~~~~~~~~~~~~~~~ 183 (289)
+.++++++|||+||.+++.+|..+|+ ++++|++++....... ..... . ...........+.........
T Consensus 77 -~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (251)
T TIGR02427 77 -GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHP 155 (251)
T ss_pred -CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCCh
Confidence 66789999999999999999999988 9999998865432110 00000 0 000000000000000000000
Q ss_pred cc---c-----ccChhhhhh---hh-ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcc
Q 022960 184 LE---Y-----RVTQESLMD---RL-STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE 251 (289)
Q Consensus 184 ~~---~-----~~~~~~~~~---~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 251 (289)
.. + ......+.. .+ ..+.... ..++++|+++++|++|.++|.+..+.+.+.+++.+++.++++||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 233 (251)
T TIGR02427 156 ARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDR--LGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHI 233 (251)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHH--hhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCc
Confidence 00 0 000000000 00 0011111 124589999999999999999999999999999999999999999
Q ss_pred cc-cCchHHHHHHHHHHH
Q 022960 252 FT-SHQDELASLVIQFIK 268 (289)
Q Consensus 252 ~~-~~~~~~~~~i~~fl~ 268 (289)
.+ ++++++.+.|.+|++
T Consensus 234 ~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 234 PCVEQPEAFNAALRDFLR 251 (251)
T ss_pred ccccChHHHHHHHHHHhC
Confidence 65 677889999999873
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=198.92 Aligned_cols=255 Identities=16% Similarity=0.167 Sum_probs=162.6
Q ss_pred ccceeeEEeeCCCCceEEEEEee------cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHE------TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~------~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
.+..++..+.+.||..+...+.. +..+|+||++||++++....++..++..+.+.||+|+++|+||||.|....
T Consensus 68 ~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 68 AVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred CCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC
Confidence 34556667888899888865442 236789999999988765434566777788889999999999999997543
Q ss_pred cccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC---ccEEEEeccCCccccc---cccc----c
Q 022960 93 LYGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND---ISIVINISGRFNLKRG---IEGR----L 161 (289)
Q Consensus 93 ~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~~~~---~~~~----~ 161 (289)
.........+|+.++++++... ...+++++||||||.+++.++.++++ |.++++++++.+.... +... .
T Consensus 148 ~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y 227 (388)
T PLN02511 148 PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVY 227 (388)
T ss_pred cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHH
Confidence 3222345678999999999765 33579999999999999999999875 7888888877654110 0110 0
Q ss_pred cchhHhhhh---hc---Ccccccccc--cccccccChhhhhhhhcc---------chh----hhhcccccCceEEEEEeC
Q 022960 162 GLGYLQRIK---QN---GFIDVRNKK--GKLEYRVTQESLMDRLST---------DIH----AACHMICQDCRVLTIHGT 220 (289)
Q Consensus 162 ~~~~~~~~~---~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~~~----~~~~~~~~~~P~l~i~g~ 220 (289)
...+...+. .. .+....... ...........+.+.+.. ++. ......+|++|+|+|+|+
T Consensus 228 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~ 307 (388)
T PLN02511 228 DKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAA 307 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcC
Confidence 011111110 00 000000000 000000000001110000 000 011122479999999999
Q ss_pred CCCccChhhH-HHHHhhCCCcEEEEEcCCCcccc-cCchH------HHHHHHHHHHhhcCC
Q 022960 221 KDKMVPAEDA-LEFDKFIPNHKLHIIEGADHEFT-SHQDE------LASLVIQFIKANYQK 273 (289)
Q Consensus 221 ~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~-~~~~~------~~~~i~~fl~~~~~~ 273 (289)
+|+++|.+.. ....+.++++++++++++||..+ +.++. +.+.+.+||+.....
T Consensus 308 dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 308 NDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 9999998765 45677789999999999999955 44443 589999999887654
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-29 Score=192.25 Aligned_cols=214 Identities=17% Similarity=0.233 Sum_probs=138.8
Q ss_pred cCCC-cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEE
Q 022960 42 TGSK-QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITA 120 (289)
Q Consensus 42 ~~~~-~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 120 (289)
.|++ |+|||+||++++.. .|..+.+.|.+. |+|+++|+||||.|.... ..++.+.++++. .+ ..++++
T Consensus 9 ~G~g~~~ivllHG~~~~~~--~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~----~~---~~~~~~ 77 (256)
T PRK10349 9 KGQGNVHLVLLHGWGLNAE--VWRCIDEELSSH-FTLHLVDLPGFGRSRGFG-ALSLADMAEAVL----QQ---APDKAI 77 (256)
T ss_pred cCCCCCeEEEECCCCCChh--HHHHHHHHHhcC-CEEEEecCCCCCCCCCCC-CCCHHHHHHHHH----hc---CCCCeE
Confidence 3445 46999999999885 499999999876 999999999999997543 334444444433 22 567899
Q ss_pred EEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc--cccc---ccchhHhhhhh---c---Ccccc---cccccccc
Q 022960 121 IIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG--IEGR---LGLGYLQRIKQ---N---GFIDV---RNKKGKLE 185 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~--~~~~---~~~~~~~~~~~---~---~~~~~---~~~~~~~~ 185 (289)
++||||||.+++.+|..+|+ |+++|++++....... .... ....+...+.. . .+... ........
T Consensus 78 lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (256)
T PRK10349 78 WLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQD 157 (256)
T ss_pred EEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHH
Confidence 99999999999999999999 9999999874332110 0000 00000000000 0 00000 00000000
Q ss_pred c----------cc-Chhhhhh---h-hccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCc
Q 022960 186 Y----------RV-TQESLMD---R-LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH 250 (289)
Q Consensus 186 ~----------~~-~~~~~~~---~-~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 250 (289)
. .. ....+.. . ...+.... ..++++|+|+++|++|.++|.+.++.+.+.++++++.+++++||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH 235 (256)
T PRK10349 158 ARALKKTVLALPMPEVDVLNGGLEILKTVDLRQP--LQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAH 235 (256)
T ss_pred HHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHH--HhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 0 00 0000000 0 00111111 12469999999999999999999999999999999999999999
Q ss_pred ccc-cCchHHHHHHHHHHH
Q 022960 251 EFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 251 ~~~-~~~~~~~~~i~~fl~ 268 (289)
+++ +.++++++.+.+|-+
T Consensus 236 ~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 236 APFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CccccCHHHHHHHHHHHhc
Confidence 976 667889999998864
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-28 Score=196.66 Aligned_cols=237 Identities=16% Similarity=0.099 Sum_probs=158.3
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcccc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYG 95 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~ 95 (289)
....+.+.++..+|.++.++++.|. +.|+||++||+++.... .|..+++.|+++||+|+++|+||+|.|.......
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~-~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~ 243 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTD-YYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQ 243 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccc
Confidence 3457889999888888998877553 46777777776665432 4778899999999999999999999997542222
Q ss_pred chHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccc---cchhHhh
Q 022960 96 NYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRL---GLGYLQR 168 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~---~~~~~~~ 168 (289)
+.. ....++++++... +.++++++|||+||++++.+|...|+ ++++|++++............ ...+...
T Consensus 244 d~~---~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~ 320 (414)
T PRK05077 244 DSS---LLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDV 320 (414)
T ss_pred cHH---HHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHH
Confidence 222 2234566777655 56799999999999999999999886 999999998764211000000 0000000
Q ss_pred hhhcCcccccccccccccccChhhhhhhhccchhh--hhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEc
Q 022960 169 IKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHA--ACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIE 246 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
+.. .+. . .......+...+...... .....++++|+|+++|++|+++|++.++.+.+..++.+++.++
T Consensus 321 la~-~lg-------~--~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~ 390 (414)
T PRK05077 321 LAS-RLG-------M--HDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIP 390 (414)
T ss_pred HHH-HhC-------C--CCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEcc
Confidence 000 000 0 000111111111110000 0001246899999999999999999999999999999999999
Q ss_pred CCCcccccCchHHHHHHHHHHHhhc
Q 022960 247 GADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 247 ~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
++ | .++.++++++.+.+||++.+
T Consensus 391 ~~-~-~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 391 FK-P-VYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred CC-C-ccCCHHHHHHHHHHHHHHHh
Confidence 86 3 23567899999999998765
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=190.75 Aligned_cols=234 Identities=21% Similarity=0.194 Sum_probs=149.4
Q ss_pred CCCceEEEEEee-cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc---ccchHHHHHHHH
Q 022960 30 SHGEKLVGILHE-TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL---YGNYRREAEDLR 105 (289)
Q Consensus 30 ~~g~~l~~~~~~-~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~~~~~~~d~~ 105 (289)
.++..+.+.... ++++++||++||++++... +|..+...+.+.||+|+++|+||||.|..+.. ..+++.+++|+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 87 (288)
T TIGR01250 9 VDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHE-YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELE 87 (288)
T ss_pred CCCCeEEEEeccCCCCCCeEEEEcCCCCccHH-HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHH
Confidence 345555544443 3357899999998776643 46667777776699999999999999986532 256788889998
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc------ccccchhHhhhhh---cC-c
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE------GRLGLGYLQRIKQ---NG-F 174 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~------~~~~~~~~~~~~~---~~-~ 174 (289)
++++.+ +.++++++||||||.+++.++..+|+ ++++|++++......... ..+.......+.. .. +
T Consensus 88 ~~~~~~---~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (288)
T TIGR01250 88 EVREKL---GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDY 164 (288)
T ss_pred HHHHHc---CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCc
Confidence 888877 67789999999999999999999999 999999887543221100 0000000000000 00 0
Q ss_pred cc-----cccccc---ccccccChhhhhh-----------hhc-----------cchhhhhcccccCceEEEEEeCCCCc
Q 022960 175 ID-----VRNKKG---KLEYRVTQESLMD-----------RLS-----------TDIHAACHMICQDCRVLTIHGTKDKM 224 (289)
Q Consensus 175 ~~-----~~~~~~---~~~~~~~~~~~~~-----------~~~-----------~~~~~~~~~~~~~~P~l~i~g~~D~~ 224 (289)
.. ...... ............. .+. ..........++++|+++++|++|.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 244 (288)
T TIGR01250 165 DNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM 244 (288)
T ss_pred chHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc
Confidence 00 000000 0000000000000 000 00000011124689999999999985
Q ss_pred cChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 225 VPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
+++..+.+.+.+++++++.++++||+++ ++++++.+.|.+||+
T Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 245 -TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred -CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 6788888999999999999999999965 677899999999974
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=185.45 Aligned_cols=232 Identities=15% Similarity=0.144 Sum_probs=149.7
Q ss_pred CCceEEEEEeec-CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHHH
Q 022960 31 HGEKLVGILHET-GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAIV 108 (289)
Q Consensus 31 ~g~~l~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i 108 (289)
+|.++. +.++ +++|+|||+||++.+.. .|..+...|.+.||+|+++|+||||.|..... ..++++.++++.+++
T Consensus 5 ~~~~~~--~~~~~~~~p~vvliHG~~~~~~--~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i 80 (273)
T PLN02211 5 NGEEVT--DMKPNRQPPHFVLIHGISGGSW--CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFL 80 (273)
T ss_pred cccccc--cccccCCCCeEEEECCCCCCcC--cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHH
Confidence 455555 3335 67899999999999884 59999999998899999999999998754432 357778888888888
Q ss_pred HHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc-ccccccchh--Hhhhhh-----cCcccccc
Q 022960 109 QDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG-IEGRLGLGY--LQRIKQ-----NGFIDVRN 179 (289)
Q Consensus 109 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-~~~~~~~~~--~~~~~~-----~~~~~~~~ 179 (289)
+.+. ..++++|+||||||.++..++..+|+ |+++|++++....... ........+ ...... ........
T Consensus 81 ~~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (273)
T PLN02211 81 SSLP--ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQP 158 (273)
T ss_pred HhcC--CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCC
Confidence 7652 24689999999999999999999998 9999999774321100 000000000 000000 00000000
Q ss_pred cc---------cccccccChhhh----hhhhcc---chhhh----hccccc-CceEEEEEeCCCCccChhhHHHHHhhCC
Q 022960 180 KK---------GKLEYRVTQESL----MDRLST---DIHAA----CHMICQ-DCRVLTIHGTKDKMVPAEDALEFDKFIP 238 (289)
Q Consensus 180 ~~---------~~~~~~~~~~~~----~~~~~~---~~~~~----~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (289)
.. ....+...+... ...... ..... ....++ ++|+++|.|++|..+|++..+.+.+.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~ 238 (273)
T PLN02211 159 PTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP 238 (273)
T ss_pred CceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 00 000000001000 000000 00000 000123 7899999999999999999999999999
Q ss_pred CcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 239 NHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 239 ~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+.+++.++ +||.++ +.|+++.+.|.++...
T Consensus 239 ~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 239 PSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred ccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 99999997 799965 7788999988887654
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=188.98 Aligned_cols=206 Identities=29% Similarity=0.389 Sum_probs=141.5
Q ss_pred EEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchHHHHHHHHHHHHHHHhcCCceEEEEEeC
Q 022960 48 VIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125 (289)
Q Consensus 48 iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S 125 (289)
|||+||++++.. .|..+++.|+ +||+|+++|+||+|.|.... ...++.+.++|+.++++.+ +.++++++|||
T Consensus 1 vv~~hG~~~~~~--~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvG~S 74 (228)
T PF12697_consen 1 VVFLHGFGGSSE--SWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL---GIKKVILVGHS 74 (228)
T ss_dssp EEEE-STTTTGG--GGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT---TTSSEEEEEET
T ss_pred eEEECCCCCCHH--HHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc---ccccccccccc
Confidence 799999999995 4999999995 68999999999999998765 3567788889999998888 66789999999
Q ss_pred hhHHHHHHHHHhCCC-ccEEEEeccCCcccccc----cccccchhH-------hhhhhcCcccccccc-cccccccChhh
Q 022960 126 KGGNAVLLYASKYND-ISIVINISGRFNLKRGI----EGRLGLGYL-------QRIKQNGFIDVRNKK-GKLEYRVTQES 192 (289)
Q Consensus 126 ~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~ 192 (289)
+||.+++.++.++|+ |+++|++++........ .......+. ..+....+....... ...........
T Consensus 75 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (228)
T PF12697_consen 75 MGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRA 154 (228)
T ss_dssp HHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccc
Confidence 999999999999998 99999999987543211 000000000 000000000000000 00000001111
Q ss_pred hhhhh-----ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHH
Q 022960 193 LMDRL-----STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELAS 261 (289)
Q Consensus 193 ~~~~~-----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~ 261 (289)
+...+ ..+...... ++++|+++++|++|.+++.+..+.+.+.+++++++.++++||+++ ++++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~--~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 155 LAEYLRSNLWQADLSEALP--RIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHH--GSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHH
T ss_pred ccccccccccccccccccc--ccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhc
Confidence 11111 111112222 458999999999999999999999999999999999999999965 66777665
|
... |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=180.69 Aligned_cols=235 Identities=17% Similarity=0.229 Sum_probs=144.5
Q ss_pred CCceEEEEEe--ecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHH
Q 022960 31 HGEKLVGILH--ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV 108 (289)
Q Consensus 31 ~g~~l~~~~~--~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 108 (289)
++..+...-. ++..++++|++||+|++.. +|-.-.+.|++ .++|+++|++|+|.|+.+.-..+.........+-|
T Consensus 74 ~~~~iw~~~~~~~~~~~~plVliHGyGAg~g--~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesi 150 (365)
T KOG4409|consen 74 NGIEIWTITVSNESANKTPLVLIHGYGAGLG--LFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESI 150 (365)
T ss_pred CCceeEEEeecccccCCCcEEEEeccchhHH--HHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHH
Confidence 4544443322 2347889999999999884 47777788888 59999999999999998764444333333444444
Q ss_pred HHHH-hcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc----ccccchhH----------------
Q 022960 109 QDFC-AKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE----GRLGLGYL---------------- 166 (289)
Q Consensus 109 ~~l~-~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~----~~~~~~~~---------------- 166 (289)
+..+ +.++++.+|+|||+||++|..||.++|+ |+.+||++|+-....... ......+.
T Consensus 151 E~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~L 230 (365)
T KOG4409|consen 151 EQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALL 230 (365)
T ss_pred HHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHH
Confidence 4433 3489999999999999999999999999 999999998643332200 00001111
Q ss_pred -----------hhhhhcCcccccccccccc-----c-----ccChhhhhhhh-------ccchhhhhcccccCceEEEEE
Q 022960 167 -----------QRIKQNGFIDVRNKKGKLE-----Y-----RVTQESLMDRL-------STDIHAACHMICQDCRVLTIH 218 (289)
Q Consensus 167 -----------~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~-------~~~~~~~~~~~~~~~P~l~i~ 218 (289)
..+....+........... + .-..+.....+ ...........+.+||+++|+
T Consensus 231 R~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiy 310 (365)
T KOG4409|consen 231 RLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIY 310 (365)
T ss_pred HhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEe
Confidence 0000000000000000000 0 00000000000 011111222224469999999
Q ss_pred eCCCCccChhhHHHHHhhC--CCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 219 GTKDKMVPAEDALEFDKFI--PNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 219 g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
|++|. ++.....++.+.+ ..++.++++++||..+ ++|+.+++.+..++++
T Consensus 311 G~~dW-mD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 311 GDRDW-MDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred cCccc-ccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 99995 4566666666543 3489999999999955 7788999999999875
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=187.90 Aligned_cols=222 Identities=23% Similarity=0.265 Sum_probs=144.3
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCC-Ccc-ccchHHHHHHHHHHHHHHHhcCCceEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEG-SFL-YGNYRREAEDLRAIVQDFCAKGRVITA 120 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~-~~~-~~~~~~~~~d~~~~i~~l~~~~~~~~~ 120 (289)
.+++||++||++++.. .|+.....|.+. |+.|+++|++|+|.++. +.. .++...+++-+..++... ..++++
T Consensus 57 ~~~pvlllHGF~~~~~--~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~---~~~~~~ 131 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSF--SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV---FVEPVS 131 (326)
T ss_pred CCCcEEEeccccCCcc--cHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh---cCcceE
Confidence 6899999999999774 599999999887 69999999999995443 332 244455555555555544 666799
Q ss_pred EEEeChhHHHHHHHHHhCCC-ccEEE---EeccCCcccccccccccchhHhhhhhcCcc------cc------------c
Q 022960 121 IIGHSKGGNAVLLYASKYND-ISIVI---NISGRFNLKRGIEGRLGLGYLQRIKQNGFI------DV------------R 178 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~-v~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------------~ 178 (289)
++|||+||.+|+.+|+.+|+ |+++| ++++.......................... .. .
T Consensus 132 lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 211 (326)
T KOG1454|consen 132 LVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLK 211 (326)
T ss_pred EEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhccee
Confidence 99999999999999999999 99999 565544332222111111000000000000 00 0
Q ss_pred c--cccccc-------------cccChhhhhhhh---cc-chhhhhccccc-CceEEEEEeCCCCccChhhHHHHHhhCC
Q 022960 179 N--KKGKLE-------------YRVTQESLMDRL---ST-DIHAACHMICQ-DCRVLTIHGTKDKMVPAEDALEFDKFIP 238 (289)
Q Consensus 179 ~--~~~~~~-------------~~~~~~~~~~~~---~~-~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (289)
. ...... ...........+ .. +........++ ++|+|+++|++|+++|.+.++.+.+.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p 291 (326)
T KOG1454|consen 212 VVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLP 291 (326)
T ss_pred eeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCC
Confidence 0 000000 000000000000 00 00111111133 4999999999999999999999999999
Q ss_pred CcEEEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 239 NHKLHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 239 ~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
++++++++++||.++ +.|+++++.|..|+...
T Consensus 292 n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 292 NAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred CceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 999999999999987 56789999999999865
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=188.48 Aligned_cols=242 Identities=22% Similarity=0.294 Sum_probs=157.8
Q ss_pred eeCCCCceEEEEEeecC-CCcEEEEEcCCCCCCCCcc------------------------hHHHHHHHHHcCccEEEEc
Q 022960 27 IPNSHGEKLVGILHETG-SKQLVIVCHGFQSTKDRIP------------------------MVNLAAALEREGISAFRFD 81 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~-~~~~iv~~hG~~~~~~~~~------------------------~~~~~~~l~~~G~~v~~~d 81 (289)
+.+.||..|+++.+.+. ++.+|+++||++.+....+ ...+++.|.++||.|+++|
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 45678999988877664 6789999999999885211 1467999999999999999
Q ss_pred cccCCCCCCCc----cccchHHHHHHHHHHHHHHHh-------------------c-C-CceEEEEEeChhHHHHHHHHH
Q 022960 82 FSGNGESEGSF----LYGNYRREAEDLRAIVQDFCA-------------------K-G-RVITAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 82 ~~G~G~s~~~~----~~~~~~~~~~d~~~~i~~l~~-------------------~-~-~~~~~l~G~S~Gg~~a~~~a~ 136 (289)
+||||.|.+.. ...++++.++|+.++++.+++ . . ..+++|+||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 99999988542 124788889999999998754 1 1 347999999999999999887
Q ss_pred hCC---------CccEEEEeccCCccccccc------ccccchhHh---hhhhc-Cccc--cccc---------cccccc
Q 022960 137 KYN---------DISIVINISGRFNLKRGIE------GRLGLGYLQ---RIKQN-GFID--VRNK---------KGKLEY 186 (289)
Q Consensus 137 ~~p---------~v~~~v~~~~~~~~~~~~~------~~~~~~~~~---~~~~~-~~~~--~~~~---------~~~~~~ 186 (289)
.++ .++++|+++|.+....... ......... .+... .... .... .....+
T Consensus 162 ~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~ 241 (332)
T TIGR01607 162 LLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRY 241 (332)
T ss_pred HhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCcccc
Confidence 542 3889999998764321100 000000110 01000 0000 0000 000000
Q ss_pred --ccChhhhhhhhccc--hhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC--CCcEEEEEcCCCcccccC--chH
Q 022960 187 --RVTQESLMDRLSTD--IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI--PNHKLHIIEGADHEFTSH--QDE 258 (289)
Q Consensus 187 --~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~--~~~ 258 (289)
......+...+... .......++.++|+|+++|++|.+++++.++.+++.. ++++++++++++|.++.+ .++
T Consensus 242 ~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~ 321 (332)
T TIGR01607 242 DGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEE 321 (332)
T ss_pred CCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHH
Confidence 00111111111110 1111222233789999999999999999999988765 468999999999997754 367
Q ss_pred HHHHHHHHHH
Q 022960 259 LASLVIQFIK 268 (289)
Q Consensus 259 ~~~~i~~fl~ 268 (289)
+.+.|.+||+
T Consensus 322 v~~~i~~wL~ 331 (332)
T TIGR01607 322 VLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhh
Confidence 9999999985
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-28 Score=194.40 Aligned_cols=235 Identities=18% Similarity=0.155 Sum_probs=145.6
Q ss_pred CCceEEEEEeec---CCCcEEEEEcCCCCCCCCcchHHHH---HHHHHcCccEEEEccccCCCCCCCcc---ccchH---
Q 022960 31 HGEKLVGILHET---GSKQLVIVCHGFQSTKDRIPMVNLA---AALEREGISAFRFDFSGNGESEGSFL---YGNYR--- 98 (289)
Q Consensus 31 ~g~~l~~~~~~~---~~~~~iv~~hG~~~~~~~~~~~~~~---~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~~~--- 98 (289)
+|.+++|...++ +..|+||++||++++... |..+. +.|...+|+|+++|+||||.|+.+.. ..+++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~--~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQD--NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCccc--chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 566777665554 244667777777766543 44332 35655579999999999999975432 12222
Q ss_pred --HHHHHHHH----HHHHHHhcCCceE-EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc-----------
Q 022960 99 --REAEDLRA----IVQDFCAKGRVIT-AIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG----------- 159 (289)
Q Consensus 99 --~~~~d~~~----~i~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~----------- 159 (289)
..++|+.+ +++.+ +++++ +|+||||||.+|+.+|.++|+ |+++|++++..........
T Consensus 102 ~~~~~~~~~~~~~~l~~~l---gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~ 178 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKF---GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTA 178 (339)
T ss_pred ceeHHHHHHHHHHHHHHHh---CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHh
Confidence 24566665 44555 88894 799999999999999999999 9999999765432110000
Q ss_pred --cc-----c-----------chhH-----hhhhhcC-ccccccc--cc-------ccccccChhhhhhhh---c-----
Q 022960 160 --RL-----G-----------LGYL-----QRIKQNG-FIDVRNK--KG-------KLEYRVTQESLMDRL---S----- 198 (289)
Q Consensus 160 --~~-----~-----------~~~~-----~~~~~~~-~~~~~~~--~~-------~~~~~~~~~~~~~~~---~----- 198 (289)
.. . ..+. ....... +...... .. ..............+ .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (339)
T PRK07581 179 DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDIS 258 (339)
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccc
Confidence 00 0 0000 0000000 0000000 00 000000000011100 0
Q ss_pred ------cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcC-CCcccc-cCchHHHHHHHHHHHhh
Q 022960 199 ------TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEG-ADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 199 ------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
.+... ...++++|+|+|+|++|.++|++.++.+.+.+++++++++++ +||..+ +++++++..|.+||++.
T Consensus 259 ~~~~~~~d~~~--~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 259 RNPAYGGDLAA--ALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred cCcccCCCHHH--HHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 01111 122468999999999999999999999999999999999999 899855 77899999999999987
Q ss_pred cC
Q 022960 271 YQ 272 (289)
Q Consensus 271 ~~ 272 (289)
+.
T Consensus 337 ~~ 338 (339)
T PRK07581 337 LA 338 (339)
T ss_pred Hh
Confidence 64
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.4e-28 Score=184.11 Aligned_cols=209 Identities=17% Similarity=0.236 Sum_probs=136.4
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEe
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGH 124 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~ 124 (289)
+|+|||+||++++.. .|..+.+.| + +|+|+++|+||||.|..+.. .++..+++|+.++++.+ +.++++++||
T Consensus 2 ~p~vvllHG~~~~~~--~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~---~~~~~~lvG~ 73 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ--DWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSY---NILPYWLVGY 73 (242)
T ss_pred CCEEEEECCCCCChH--HHHHHHHHc-C-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHc---CCCCeEEEEE
Confidence 578999999999985 499999988 3 69999999999999986543 47788899999999877 7789999999
Q ss_pred ChhHHHHHHHHHhCC-C-ccEEEEeccCCccccccc---ccc-cchhHhhhhhcCcc------------ccccccccc--
Q 022960 125 SKGGNAVLLYASKYN-D-ISIVINISGRFNLKRGIE---GRL-GLGYLQRIKQNGFI------------DVRNKKGKL-- 184 (289)
Q Consensus 125 S~Gg~~a~~~a~~~p-~-v~~~v~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~------------~~~~~~~~~-- 184 (289)
||||.+|+.++.++| + |++++++++......... ... ...+...+...... .........
T Consensus 74 S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (242)
T PRK11126 74 SLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQL 153 (242)
T ss_pred CHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHH
Confidence 999999999999985 4 999999886643221100 000 00011100000000 000000000
Q ss_pred ---ccccChhhhhhhh-------ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-
Q 022960 185 ---EYRVTQESLMDRL-------STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT- 253 (289)
Q Consensus 185 ---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~- 253 (289)
............+ ..+... ...++++|+++++|++|..+. .+.+. .+++++.++++||+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~~i~~~gH~~~~ 225 (242)
T PRK11126 154 VAKRSNNNGAAVAAMLEATSLAKQPDLRP--ALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALPLHVIPNAGHNAHR 225 (242)
T ss_pred HHhcccCCHHHHHHHHHhcCcccCCcHHH--HhhccCCCeEEEEeCCcchHH-----HHHHH-hcCeEEEeCCCCCchhh
Confidence 0000000000000 001111 112568999999999998652 22333 3789999999999976
Q ss_pred cCchHHHHHHHHHHHh
Q 022960 254 SHQDELASLVIQFIKA 269 (289)
Q Consensus 254 ~~~~~~~~~i~~fl~~ 269 (289)
++++++++.|.+|+++
T Consensus 226 e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 226 ENPAAFAASLAQILRL 241 (242)
T ss_pred hChHHHHHHHHHHHhh
Confidence 7788999999999975
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=193.77 Aligned_cols=236 Identities=16% Similarity=0.169 Sum_probs=148.1
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCC----------cchHHHHH---HHHHcCccEEEEccccCCCCCCCccccc
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDR----------IPMVNLAA---ALEREGISAFRFDFSGNGESEGSFLYGN 96 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~----------~~~~~~~~---~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 96 (289)
.+|.+++|...+++ ++++||+||+.++... .+|..+.. .|...+|+|+++|+||||.|... ..+
T Consensus 43 ~~~~~l~y~~~G~~-~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~--~~~ 119 (343)
T PRK08775 43 LEDLRLRYELIGPA-GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV--PID 119 (343)
T ss_pred CCCceEEEEEeccC-CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC--CCC
Confidence 46777776555433 3356666666665431 14777775 56434699999999999988532 345
Q ss_pred hHHHHHHHHHHHHHHHhcCCceE-EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc--ch--------
Q 022960 97 YRREAEDLRAIVQDFCAKGRVIT-AIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG--LG-------- 164 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~--~~-------- 164 (289)
..+.++|+.++++.+ +.+++ +|+||||||++|+.+|.++|+ |+++|++++............. ..
T Consensus 120 ~~~~a~dl~~ll~~l---~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (343)
T PRK08775 120 TADQADAIALLLDAL---GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQ 196 (343)
T ss_pred HHHHHHHHHHHHHHc---CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCC
Confidence 677899999999988 77664 799999999999999999999 9999999875432211000000 00
Q ss_pred --------hHhhh--h-hcC---ccccccccccc---ccccChh-----------------hhhhhhccchhhhhccccc
Q 022960 165 --------YLQRI--K-QNG---FIDVRNKKGKL---EYRVTQE-----------------SLMDRLSTDIHAACHMICQ 210 (289)
Q Consensus 165 --------~~~~~--~-~~~---~~~~~~~~~~~---~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~ 210 (289)
..... . ... +.......... ....... .+...............++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 276 (343)
T PRK08775 197 CAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAI 276 (343)
T ss_pred CCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcC
Confidence 00000 0 000 00000000000 0000000 0000000000000112356
Q ss_pred CceEEEEEeCCCCccChhhHHHHHhhC-CCcEEEEEcC-CCcccc-cCchHHHHHHHHHHHhhc
Q 022960 211 DCRVLTIHGTKDKMVPAEDALEFDKFI-PNHKLHIIEG-ADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
++|+|+++|++|.++|++..+.+.+.+ ++++++++++ +||..+ ++++++++.|.+||++.-
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 899999999999999999999999887 6899999985 999965 788999999999997653
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-27 Score=185.50 Aligned_cols=238 Identities=14% Similarity=0.136 Sum_probs=150.6
Q ss_pred EEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc--ccchHHHHH
Q 022960 25 VVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL--YGNYRREAE 102 (289)
Q Consensus 25 ~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~ 102 (289)
..+...+|.++++...++.++++||++||++++... ..+...+...+|+|+++|+||||.|..... ..+..+.++
T Consensus 7 ~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 83 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVA 83 (306)
T ss_pred CeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHH
Confidence 355666788898766655557889999998877632 234445555679999999999999986542 335567788
Q ss_pred HHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc-------ccccchhHhhhh----
Q 022960 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE-------GRLGLGYLQRIK---- 170 (289)
Q Consensus 103 d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~---- 170 (289)
|+..+++++ +.++++++||||||.+++.++.++|+ |+++|++++......... ..........+.
T Consensus 84 dl~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (306)
T TIGR01249 84 DIEKLREKL---GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIP 160 (306)
T ss_pred HHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCC
Confidence 888888877 67789999999999999999999998 999999987543211000 000000000000
Q ss_pred hc----Ccc----c-ccccc---------------ccccccc---------Ch---hhhhhh-----hccchhh-----h
Q 022960 171 QN----GFI----D-VRNKK---------------GKLEYRV---------TQ---ESLMDR-----LSTDIHA-----A 204 (289)
Q Consensus 171 ~~----~~~----~-~~~~~---------------~~~~~~~---------~~---~~~~~~-----~~~~~~~-----~ 204 (289)
.. .+. . ..... ....... .. ..+... ....... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (306)
T TIGR01249 161 ENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFIL 240 (306)
T ss_pred hhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHH
Confidence 00 000 0 00000 0000000 00 000000 0000000 0
Q ss_pred hccccc-CceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHhh
Q 022960 205 CHMICQ-DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKAN 270 (289)
Q Consensus 205 ~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 270 (289)
....++ ++|+|+++|++|.++|.+.++.+++.++++++++++++||..+ .++..+.|.+|+.+.
T Consensus 241 ~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 241 DNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAF--DPNNLAALVHALETY 305 (306)
T ss_pred HhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCCC--ChHHHHHHHHHHHHh
Confidence 011134 5899999999999999999999999999999999999999975 345667777777654
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=184.17 Aligned_cols=209 Identities=21% Similarity=0.305 Sum_probs=136.3
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeC
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S 125 (289)
|+||++||++++.. .|..+.+.|.+ +|+|+++|+||||.|.... ..++.+.++++.+. ..++++++|||
T Consensus 5 ~~iv~~HG~~~~~~--~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~-------~~~~~~lvG~S 73 (245)
T TIGR01738 5 VHLVLIHGWGMNAE--VFRCLDEELSA-HFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQ-------APDPAIWLGWS 73 (245)
T ss_pred ceEEEEcCCCCchh--hHHHHHHhhcc-CeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHh-------CCCCeEEEEEc
Confidence 78999999999885 48999999976 5999999999999987543 23444444444332 23579999999
Q ss_pred hhHHHHHHHHHhCCC-ccEEEEeccCCccccc--cccccc----chhHhhhhhc------Cccc---cccccccccc---
Q 022960 126 KGGNAVLLYASKYND-ISIVINISGRFNLKRG--IEGRLG----LGYLQRIKQN------GFID---VRNKKGKLEY--- 186 (289)
Q Consensus 126 ~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~--~~~~~~----~~~~~~~~~~------~~~~---~~~~~~~~~~--- 186 (289)
|||.+++.++.++|+ ++++|++++....... ...... ..+...+... .+.. ..........
T Consensus 74 ~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (245)
T TIGR01738 74 LGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARAL 153 (245)
T ss_pred HHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHH
Confidence 999999999999999 9999999775432111 000000 0000000000 0000 0000000000
Q ss_pred ------ccC--hhhhhhhh----ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-
Q 022960 187 ------RVT--QESLMDRL----STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT- 253 (289)
Q Consensus 187 ------~~~--~~~~~~~~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~- 253 (289)
... ...+...+ ..+.... ..++++|+++++|++|.++|.+..+.+.+.++++++++++++||+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 231 (245)
T TIGR01738 154 KQTLLARPTPNVQVLQAGLEILATVDLRQP--LQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFL 231 (245)
T ss_pred HHHhhccCCCCHHHHHHHHHHhhcccHHHH--HhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccc
Confidence 000 00000000 0111111 12568999999999999999999999999999999999999999955
Q ss_pred cCchHHHHHHHHHH
Q 022960 254 SHQDELASLVIQFI 267 (289)
Q Consensus 254 ~~~~~~~~~i~~fl 267 (289)
++++++++.|.+|+
T Consensus 232 e~p~~~~~~i~~fi 245 (245)
T TIGR01738 232 SHAEAFCALLVAFK 245 (245)
T ss_pred cCHHHHHHHHHhhC
Confidence 77889999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=193.32 Aligned_cols=230 Identities=20% Similarity=0.239 Sum_probs=149.4
Q ss_pred CCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH
Q 022960 31 HGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 31 ~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 110 (289)
++.++++...+++++++|||+||++++... |..+.+.|.+. |+|+++|+||||.|.......++.+.++++.++++.
T Consensus 117 ~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~--~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 193 (371)
T PRK14875 117 GGRTVRYLRLGEGDGTPVVLIHGFGGDLNN--WLFNHAALAAG-RPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA 193 (371)
T ss_pred cCcEEEEecccCCCCCeEEEECCCCCccch--HHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 355666554455568899999999999865 88889888875 999999999999997655566778888888888877
Q ss_pred HHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc---cccc----cchhHhhhhhcCccccccccc
Q 022960 111 FCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGI---EGRL----GLGYLQRIKQNGFIDVRNKKG 182 (289)
Q Consensus 111 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~ 182 (289)
+ +..+++++|||+||.+++.+|..+|+ ++++|++++........ ...+ ............+........
T Consensus 194 ~---~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (371)
T PRK14875 194 L---GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTR 270 (371)
T ss_pred c---CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCH
Confidence 6 77789999999999999999999997 99999998753221100 0000 000000000000000000000
Q ss_pred c---ccc-----ccChhh---hhhhh-cc---chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcC
Q 022960 183 K---LEY-----RVTQES---LMDRL-ST---DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEG 247 (289)
Q Consensus 183 ~---~~~-----~~~~~~---~~~~~-~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (289)
. ..+ ...... +.... .. .........++++|+|+++|++|.++|++.++.+ ..+.++.++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~ 347 (371)
T PRK14875 271 QMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPG 347 (371)
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCC
Confidence 0 000 000000 00000 00 0000011124689999999999999998876654 34689999999
Q ss_pred CCcccc-cCchHHHHHHHHHHHh
Q 022960 248 ADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 248 ~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+||+++ ++++++.+.|.+||++
T Consensus 348 ~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 348 AGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCChhhhCHHHHHHHHHHHhcc
Confidence 999965 6678899999999864
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-27 Score=185.71 Aligned_cols=250 Identities=16% Similarity=0.127 Sum_probs=157.3
Q ss_pred cceeeEEeeCCCCceEEEEEee-c---CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcccc
Q 022960 20 VQRRRVVIPNSHGEKLVGILHE-T---GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYG 95 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~-~---~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~ 95 (289)
+..+...+...||..+...+.. + +++|+||++||++++....++..+++.|.++||+|+++|+||||.+.......
T Consensus 29 ~~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~ 108 (324)
T PRK10985 29 FTPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRI 108 (324)
T ss_pred CCcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcce
Confidence 3444555677788777655432 2 25789999999998765434567889999999999999999999775432211
Q ss_pred chHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCC-C--ccEEEEeccCCccccccc---cc----ccch
Q 022960 96 NYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYN-D--ISIVINISGRFNLKRGIE---GR----LGLG 164 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p-~--v~~~v~~~~~~~~~~~~~---~~----~~~~ 164 (289)
......+|+..+++++++. +..+++++||||||.+++.++..++ + ++++|+++++++...... .. ....
T Consensus 109 ~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~ 188 (324)
T PRK10985 109 YHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRY 188 (324)
T ss_pred ECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHH
Confidence 1123468888888888765 5668999999999999888887764 3 889999998876432110 00 1110
Q ss_pred hHhhhhhcC---cccccccc--c-cccc-ccChh--------------hhhhhh-ccchhhhhcccccCceEEEEEeCCC
Q 022960 165 YLQRIKQNG---FIDVRNKK--G-KLEY-RVTQE--------------SLMDRL-STDIHAACHMICQDCRVLTIHGTKD 222 (289)
Q Consensus 165 ~~~~~~~~~---~~~~~~~~--~-~~~~-~~~~~--------------~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D 222 (289)
+...+.... ........ . .... ..... ...+.+ ..+.... ..++++|+++|+|++|
T Consensus 189 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~--l~~i~~P~lii~g~~D 266 (324)
T PRK10985 189 LLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPL--LNQIRKPTLIIHAKDD 266 (324)
T ss_pred HHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHH--HhCCCCCEEEEecCCC
Confidence 111111000 00000000 0 0000 00000 000111 0111111 1256899999999999
Q ss_pred CccChhhHHHHHhhCCCcEEEEEcCCCcccccC-----c-hHHHHHHHHHHHhhc
Q 022960 223 KMVPAEDALEFDKFIPNHKLHIIEGADHEFTSH-----Q-DELASLVIQFIKANY 271 (289)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----~-~~~~~~i~~fl~~~~ 271 (289)
++++.+....+.+..++.++.+++++||+.+.+ + ..+-+.+.+|++...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 267 PFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred CCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 999998888887788899999999999995532 1 356777889987654
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=181.64 Aligned_cols=215 Identities=24% Similarity=0.340 Sum_probs=140.7
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc--ccchHHHHHH-HHHHHHHHHhcCCceEEE
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL--YGNYRREAED-LRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~d-~~~~i~~l~~~~~~~~~l 121 (289)
+|+||++||++++... |..+.+.|+ .||+|+++|+||||.|..+.. ..++.+.+++ +..+++.+ +.+++++
T Consensus 1 ~~~vv~~hG~~~~~~~--~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 74 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD--WQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL---GIEPFFL 74 (251)
T ss_pred CCEEEEEcCCCCchhh--HHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc---CCCeEEE
Confidence 4789999999998864 899999998 689999999999999976532 3456666666 55555555 6778999
Q ss_pred EEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc----ccchhHhhhhhcCcccc---------ccc---cccc
Q 022960 122 IGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR----LGLGYLQRIKQNGFIDV---------RNK---KGKL 184 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---------~~~---~~~~ 184 (289)
+|||+||.+++.++.++|+ |++++++++........... ....+...+........ ... ....
T Consensus 75 ~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T TIGR03695 75 VGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPE 154 (251)
T ss_pred EEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChH
Confidence 9999999999999999999 99999998765432211000 00000111110000000 000 0000
Q ss_pred -c-------cccChhhhhhhhc-------cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCC
Q 022960 185 -E-------YRVTQESLMDRLS-------TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGAD 249 (289)
Q Consensus 185 -~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g 249 (289)
. .......+...+. .+.... ..++++|+++++|++|..++ +..+.+.+..++++++.++++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~g 231 (251)
T TIGR03695 155 QRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPK--LQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAG 231 (251)
T ss_pred HhHHHHHhcccccchHHHHHHHHhhhhcccchHHH--hhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCC
Confidence 0 0000000000000 000011 12468999999999998774 5677788888999999999999
Q ss_pred cccc-cCchHHHHHHHHHHH
Q 022960 250 HEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 250 H~~~-~~~~~~~~~i~~fl~ 268 (289)
|+++ ++++++++.|.+||+
T Consensus 232 H~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 232 HNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCcCccChHHHHHHHHHHhC
Confidence 9965 677889999999973
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=190.96 Aligned_cols=235 Identities=17% Similarity=0.225 Sum_probs=150.2
Q ss_pred CCceEEEEEeec---CCCcEEEEEcCCCCCCCCc---------chHHHH---HHHHHcCccEEEEcccc--CCCCCCC--
Q 022960 31 HGEKLVGILHET---GSKQLVIVCHGFQSTKDRI---------PMVNLA---AALEREGISAFRFDFSG--NGESEGS-- 91 (289)
Q Consensus 31 ~g~~l~~~~~~~---~~~~~iv~~hG~~~~~~~~---------~~~~~~---~~l~~~G~~v~~~d~~G--~G~s~~~-- 91 (289)
+|.+++|..+++ +.+++||++||++++.... +|..+. ..|...+|.|+++|+|| ||.|...
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 567788877764 3468999999999976321 366665 35555679999999999 5555421
Q ss_pred ----------ccccchHHHHHHHHHHHHHHHhcCCce-EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc
Q 022960 92 ----------FLYGNYRREAEDLRAIVQDFCAKGRVI-TAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG 159 (289)
Q Consensus 92 ----------~~~~~~~~~~~d~~~~i~~l~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~ 159 (289)
....++.++++|+.++++.+ +.++ ++++||||||.+++.++.++|+ |+++|++++..........
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA 170 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH
Confidence 11346788889999999888 7888 9999999999999999999999 9999999986543211000
Q ss_pred c---ccchh-----------------------Hhhhhh----------cCcccccccc--cc---------ccc------
Q 022960 160 R---LGLGY-----------------------LQRIKQ----------NGFIDVRNKK--GK---------LEY------ 186 (289)
Q Consensus 160 ~---~~~~~-----------------------~~~~~~----------~~~~~~~~~~--~~---------~~~------ 186 (289)
. ..... ...+.. ..+....... .. ..+
T Consensus 171 ~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T TIGR01392 171 FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGD 250 (351)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHH
Confidence 0 00000 000000 0000000000 00 000
Q ss_pred ----ccChhhh---hhhhc-cchh-----hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEE-----EEcCC
Q 022960 187 ----RVTQESL---MDRLS-TDIH-----AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLH-----IIEGA 248 (289)
Q Consensus 187 ----~~~~~~~---~~~~~-~~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 248 (289)
......+ ...+. .+.. ......+|++|+|+|+|++|.++|++.++.+++.++++++. +++++
T Consensus 251 ~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~ 330 (351)
T TIGR01392 251 KFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPY 330 (351)
T ss_pred HHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCC
Confidence 0000000 00000 0000 00112256899999999999999999999999999988765 55789
Q ss_pred Ccccc-cCchHHHHHHHHHHH
Q 022960 249 DHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 249 gH~~~-~~~~~~~~~i~~fl~ 268 (289)
||..+ ++++++++.|.+||+
T Consensus 331 GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 331 GHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CcchhhcCHHHHHHHHHHHhC
Confidence 99965 778899999999973
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-26 Score=183.77 Aligned_cols=232 Identities=15% Similarity=0.117 Sum_probs=141.0
Q ss_pred eEEEEEee-cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccc-cchHH----HHHHHHHH
Q 022960 34 KLVGILHE-TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY-GNYRR----EAEDLRAI 107 (289)
Q Consensus 34 ~l~~~~~~-~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-~~~~~----~~~d~~~~ 107 (289)
.+.+..+. .+++|+||++||++++.. .|....+.|.+. |+|+++|+||||.|+.+... .+... .++++.++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~--~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 169 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQG--FFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEW 169 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchh--HHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHH
Confidence 45444433 346799999999998774 377778888875 99999999999999765322 11121 23344444
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc--ccc---cchhH---------------
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE--GRL---GLGYL--------------- 166 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~--~~~---~~~~~--------------- 166 (289)
++.+ +.++++|+||||||.+++.+|.++|+ |+++|++++......... ... ...+.
T Consensus 170 ~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 246 (402)
T PLN02894 170 RKAK---NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQ 246 (402)
T ss_pred HHHc---CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHH
Confidence 4433 77799999999999999999999998 999999987532211100 000 00000
Q ss_pred --------------hhhhhcCccccccc--cccccccc-------------Chhhhhhhh-------ccchhhhhccccc
Q 022960 167 --------------QRIKQNGFIDVRNK--KGKLEYRV-------------TQESLMDRL-------STDIHAACHMICQ 210 (289)
Q Consensus 167 --------------~~~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~~-------~~~~~~~~~~~~~ 210 (289)
.......+...... ........ ......... ..+.... ..++
T Consensus 247 ~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~I 324 (402)
T PLN02894 247 KIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLES--ASEW 324 (402)
T ss_pred HHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhh--cccC
Confidence 00000000000000 00000000 000000000 0111111 1246
Q ss_pred CceEEEEEeCCCCccChhhHHHHHhhCC-CcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcCCC
Q 022960 211 DCRVLTIHGTKDKMVPAEDALEFDKFIP-NHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~~~ 274 (289)
++|+++++|++|.+.+ .....+.+..+ .+++++++++||+.+ ++++++++.+.+|++..+...
T Consensus 325 ~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 325 KVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred CCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCC
Confidence 8999999999998765 55555555554 589999999999965 778899999999999988764
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-26 Score=176.32 Aligned_cols=239 Identities=23% Similarity=0.310 Sum_probs=151.6
Q ss_pred eeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCC--CcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchH
Q 022960 23 RRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKD--RIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~ 98 (289)
+.+.+.. +|.++.+++..|. +++.+|++||+++... ...+..+++.|+++||.|+++|+||||.|.+.. .++.
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~ 79 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFE 79 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHH
Confidence 3566664 5677888777654 4567888888664321 123667899999999999999999999987543 3567
Q ss_pred HHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccc-cccchhHhhhhhcCcc
Q 022960 99 REAEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEG-RLGLGYLQRIKQNGFI 175 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 175 (289)
.+.+|+.++++++++. +.++++++|||+||.+++.++...+.|+++|+++|++........ .....+........+.
T Consensus 80 ~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (274)
T TIGR03100 80 GIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFW 159 (274)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHH
Confidence 7889999999999765 567899999999999999987765559999999987543221111 1111111111111010
Q ss_pred cccccccccccccChhhhhh---------------hhccchhhhhcccccCceEEEEEeCCCCccChhhH------HHHH
Q 022960 176 DVRNKKGKLEYRVTQESLMD---------------RLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDA------LEFD 234 (289)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~------~~~~ 234 (289)
... ..+...+......+.. ....+...... .+++|+++++|..|...+ ... ..+.
T Consensus 160 ~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~ 235 (274)
T TIGR03100 160 RKL-LSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLE--RFQGPVLFILSGNDLTAQ-EFADSVLGEPAWR 235 (274)
T ss_pred HHh-cCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHH--hcCCcEEEEEcCcchhHH-HHHHHhccChhhH
Confidence 000 0000000000000000 01111111122 348999999999998763 222 4455
Q ss_pred hhC--CCcEEEEEcCCCcccc-cCc-hHHHHHHHHHHH
Q 022960 235 KFI--PNHKLHIIEGADHEFT-SHQ-DELASLVIQFIK 268 (289)
Q Consensus 235 ~~~--~~~~~~~~~~~gH~~~-~~~-~~~~~~i~~fl~ 268 (289)
+.+ +++++..+++++|++. ++. +++.+.|.+||+
T Consensus 236 ~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 236 GALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 544 7899999999999874 333 689999999995
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=185.82 Aligned_cols=237 Identities=17% Similarity=0.187 Sum_probs=151.1
Q ss_pred CCceEEEEEeec---CCCcEEEEEcCCCCCCCCc-----------chHHHHH---HHHHcCccEEEEccccC-CCCCCCc
Q 022960 31 HGEKLVGILHET---GSKQLVIVCHGFQSTKDRI-----------PMVNLAA---ALEREGISAFRFDFSGN-GESEGSF 92 (289)
Q Consensus 31 ~g~~l~~~~~~~---~~~~~iv~~hG~~~~~~~~-----------~~~~~~~---~l~~~G~~v~~~d~~G~-G~s~~~~ 92 (289)
+|.+++|..++. +.+|+||++||++++...+ +|..++. .|...+|+|+++|++|+ |.|+++.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 455667666653 2378999999999988631 2666652 34344799999999983 4443221
Q ss_pred --------------cccchHHHHHHHHHHHHHHHhcCCce-EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc
Q 022960 93 --------------LYGNYRREAEDLRAIVQDFCAKGRVI-TAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG 156 (289)
Q Consensus 93 --------------~~~~~~~~~~d~~~~i~~l~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~ 156 (289)
..+++..+++++.++++.+ +.++ ++++||||||.+++.+|.++|+ |+++|++++.......
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 187 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQ 187 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHH
Confidence 1457888999999999988 7888 4899999999999999999999 9999999876533211
Q ss_pred ---ccccccchh------------------------Hhhh---h---h----cCcccccccccc-c--cc----------
Q 022960 157 ---IEGRLGLGY------------------------LQRI---K---Q----NGFIDVRNKKGK-L--EY---------- 186 (289)
Q Consensus 157 ---~~~~~~~~~------------------------~~~~---~---~----~~~~~~~~~~~~-~--~~---------- 186 (289)
+........ .... . . ..+......... . ..
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (379)
T PRK00175 188 NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRY 267 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHH
Confidence 000000000 0000 0 0 000000000000 0 00
Q ss_pred -------ccChhhhh---hhhc-c--------chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc----EEE
Q 022960 187 -------RVTQESLM---DRLS-T--------DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH----KLH 243 (289)
Q Consensus 187 -------~~~~~~~~---~~~~-~--------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~ 243 (289)
......+. ..+. . +... ...+|++|+|+|+|++|.++|++.++.+.+.++++ +++
T Consensus 268 ~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~--~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~ 345 (379)
T PRK00175 268 QGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAA--ALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYA 345 (379)
T ss_pred HHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHH--HHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEE
Confidence 00000000 0000 0 0111 11256899999999999999999999999999886 788
Q ss_pred EEc-CCCcccc-cCchHHHHHHHHHHHhhcC
Q 022960 244 IIE-GADHEFT-SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 244 ~~~-~~gH~~~-~~~~~~~~~i~~fl~~~~~ 272 (289)
+++ ++||..+ ++++++++.|.+||.+...
T Consensus 346 ~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 346 EIDSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred EeCCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 775 8999955 7788999999999987543
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=161.57 Aligned_cols=233 Identities=17% Similarity=0.168 Sum_probs=170.9
Q ss_pred ccCCcccceeeEEeeCCCCceEEEEEeec-CCCcEEEEEcCCCCCCCCcchHHHHHHH-HHcCccEEEEccccCCCCCCC
Q 022960 14 FQQDPVVQRRRVVIPNSHGEKLVGILHET-GSKQLVIVCHGFQSTKDRIPMVNLAAAL-EREGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~~G~G~s~~~ 91 (289)
.|.+..++.+.+++.+.|..++..+.... .+.|+++++||..|+-.. ....++.+ .+-+.+|+.+++||+|.|.+.
T Consensus 46 tP~~~n~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGh--r~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs 123 (300)
T KOG4391|consen 46 TPKEFNMPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGH--RLPIARVFYVNLKMNVLIVSYRGYGKSEGS 123 (300)
T ss_pred CccccCCCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccc--hhhHHHHHHHHcCceEEEEEeeccccCCCC
Confidence 46677899999999999999999876543 489999999999988754 34445444 444899999999999999988
Q ss_pred ccccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHh
Q 022960 92 FLYGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQ 167 (289)
Q Consensus 92 ~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~ 167 (289)
+.... ..-|..++++++..+ +..+++++|.|+||.+|+.+|+++.+ +.++|+-+.+...+......+.....+
T Consensus 124 psE~G---L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k 200 (300)
T KOG4391|consen 124 PSEEG---LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMK 200 (300)
T ss_pred ccccc---eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhh
Confidence 76544 356778889999776 55689999999999999999999988 999998887665432221111110000
Q ss_pred hhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC--cEEEEE
Q 022960 168 RIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN--HKLHII 245 (289)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~ 245 (289)
.+...-+ .+.+. ... ... ..+.|.|++.|.+|++||+...+.+++.++. .++..+
T Consensus 201 ~i~~lc~-------------------kn~~~-S~~-ki~--~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eF 257 (300)
T KOG4391|consen 201 YIPLLCY-------------------KNKWL-SYR-KIG--QCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEF 257 (300)
T ss_pred HHHHHHH-------------------Hhhhc-chh-hhc--cccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeC
Confidence 0000000 00000 000 000 2378999999999999999999999999975 789999
Q ss_pred cCCCcccccCchHHHHHHHHHHHhhcCCC
Q 022960 246 EGADHEFTSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 246 ~~~gH~~~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
|++.|.-.--.+-+.+.|.+||.+....+
T Consensus 258 P~gtHNDT~i~dGYfq~i~dFlaE~~~~~ 286 (300)
T KOG4391|consen 258 PDGTHNDTWICDGYFQAIEDFLAEVVKSS 286 (300)
T ss_pred CCCccCceEEeccHHHHHHHHHHHhccCC
Confidence 99999854445778999999999887653
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=162.49 Aligned_cols=216 Identities=19% Similarity=0.190 Sum_probs=162.9
Q ss_pred ceeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCCccccch
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGSFLYGNY 97 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~ 97 (289)
..+-+..++..|..+.+.++.+. ..++++++||...+... ...+...|..+ +++++.+|++|+|.|.+.+...
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlgq--~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-- 109 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLGQ--MVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-- 109 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchHH--HHHHHHHHhhcccceEEEEecccccccCCCcccc--
Confidence 34455666777878877776655 35899999999666542 44455555553 6999999999999999887654
Q ss_pred HHHHHHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcc
Q 022960 98 RREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFI 175 (289)
Q Consensus 98 ~~~~~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (289)
...+|+.++.++|++.. .++++|+|+|+|+..++.+|.+.| ++++|+.+|.....+.+.......
T Consensus 110 -n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-~~alVL~SPf~S~~rv~~~~~~~~----------- 176 (258)
T KOG1552|consen 110 -NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-LAAVVLHSPFTSGMRVAFPDTKTT----------- 176 (258)
T ss_pred -cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-cceEEEeccchhhhhhhccCcceE-----------
Confidence 44789999999998884 589999999999999999999999 999999999765433222110000
Q ss_pred cccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc-EEEEEcCCCccccc
Q 022960 176 DVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH-KLHIIEGADHEFTS 254 (289)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ 254 (289)
+.++.... .. .-..++||+|++||++|++++......+.+..+++ +-.++.|+||...+
T Consensus 177 ----------~~~d~f~~--------i~--kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~ 236 (258)
T KOG1552|consen 177 ----------YCFDAFPN--------IE--KISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIE 236 (258)
T ss_pred ----------Eeeccccc--------cC--cceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccc
Confidence 00000000 01 11145899999999999999999999999999875 88999999999888
Q ss_pred CchHHHHHHHHHHHhhcCC
Q 022960 255 HQDELASLVIQFIKANYQK 273 (289)
Q Consensus 255 ~~~~~~~~i~~fl~~~~~~ 273 (289)
..+++.+.+..|+......
T Consensus 237 ~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 237 LYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred cCHHHHHHHHHHHHHhccc
Confidence 8899999999999876543
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-25 Score=168.55 Aligned_cols=207 Identities=17% Similarity=0.171 Sum_probs=132.7
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccc-------hHHHHHHHHHHHHHHHhc--
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN-------YRREAEDLRAIVQDFCAK-- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~-------~~~~~~d~~~~i~~l~~~-- 114 (289)
+.|+||++||++++... |..+++.|+++||.|+++|+||||.+........ .....+|+.++++++.+.
T Consensus 26 ~~p~vv~~HG~~~~~~~--~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLV--YSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCEEEEeCCCCcccch--HHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46899999999988754 8889999999999999999999997632211111 123357777888887665
Q ss_pred -CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhh
Q 022960 115 -GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESL 193 (289)
Q Consensus 115 -~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (289)
+.++++++|||+||.+++.++.++|++++.+.+.+..... .. .... +......... ........+
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~----~~~~~~~~~~-~~~~~~~~~ 169 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFT-SL--------ARTL----FPPLIPETAA-QQAEFNNIV 169 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHH-HH--------HHHh----cccccccccc-cHHHHHHHH
Confidence 4568999999999999999999998865554433211110 00 0000 0000000000 000000000
Q ss_pred hhhhccchhhhhccccc-CceEEEEEeCCCCccChhhHHHHHhhCCC------cEEEEEcCCCcccccCchHHHHHHHHH
Q 022960 194 MDRLSTDIHAACHMICQ-DCRVLTIHGTKDKMVPAEDALEFDKFIPN------HKLHIIEGADHEFTSHQDELASLVIQF 266 (289)
Q Consensus 194 ~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~gH~~~~~~~~~~~~i~~f 266 (289)
......+..... .++ ++|+|+++|++|.++|++.++.+.+.++. ++++.+++++|.+. .+..+.+.+|
T Consensus 170 ~~~~~~~~~~~~--~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~~~~~~~~f 244 (249)
T PRK10566 170 APLAEWEVTHQL--EQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PEALDAGVAF 244 (249)
T ss_pred HHHhhcChhhhh--hhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HHHHHHHHHH
Confidence 000001111111 122 68999999999999999999998887642 57788999999863 5678999999
Q ss_pred HHhhc
Q 022960 267 IKANY 271 (289)
Q Consensus 267 l~~~~ 271 (289)
|++++
T Consensus 245 l~~~~ 249 (249)
T PRK10566 245 FRQHL 249 (249)
T ss_pred HHhhC
Confidence 98753
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.3e-25 Score=188.52 Aligned_cols=236 Identities=17% Similarity=0.163 Sum_probs=150.4
Q ss_pred eCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchHHHHHHHH
Q 022960 28 PNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYRREAEDLR 105 (289)
Q Consensus 28 ~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~ 105 (289)
...+|.+++++.++++++|+|||+||++++.. .|..+.+.|. .||+|+++|+||||.|.... ...+++.+++|+.
T Consensus 8 ~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~--~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~ 84 (582)
T PRK05855 8 VSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHE--VWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFA 84 (582)
T ss_pred EeeCCEEEEEEEcCCCCCCeEEEEcCCCchHH--HHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHHH
Confidence 34678899988777667899999999998885 4899999994 57999999999999998643 3457889999999
Q ss_pred HHHHHHHhcCCc-eEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCccc-ccc-cccc----cc---hhHhhhhhc
Q 022960 106 AIVQDFCAKGRV-ITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRFNLK-RGI-EGRL----GL---GYLQRIKQN 172 (289)
Q Consensus 106 ~~i~~l~~~~~~-~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~~~-~~~-~~~~----~~---~~~~~~~~~ 172 (289)
++++.+ +.. +++|+||||||.+++.++... +. +..++.++++.... ... .... .. .....+...
T Consensus 85 ~~i~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (582)
T PRK05855 85 AVIDAV---SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRS 161 (582)
T ss_pred HHHHHh---CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhh
Confidence 999987 444 499999999999998887663 22 44444444322100 000 0000 00 000000000
Q ss_pred C----------------------ccccccccccc-cccc-----------ChhhhhhhhccchhhhhcccccCceEEEEE
Q 022960 173 G----------------------FIDVRNKKGKL-EYRV-----------TQESLMDRLSTDIHAACHMICQDCRVLTIH 218 (289)
Q Consensus 173 ~----------------------~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 218 (289)
. +.......... .... ....+........ .......+++|+++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~lii~ 240 (582)
T PRK05855 162 WYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSL-SRPRERYTDVPVQLIV 240 (582)
T ss_pred HHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhh-ccCccCCccCceEEEE
Confidence 0 00000000000 0000 0000000000000 0001113689999999
Q ss_pred eCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 219 GTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 219 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
|++|.++|++..+.+.+.+++.+++.++ +||+++ ++++++.+.|.+|+++..
T Consensus 241 G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 241 PTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred eCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 9999999999999999888888888887 689965 778899999999998754
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=158.73 Aligned_cols=186 Identities=16% Similarity=0.208 Sum_probs=126.6
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEE
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIG 123 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G 123 (289)
|+||++||++++..+|....+.+.|.+. +|+|+++|+|||+ .+.++++.++++.+ +.++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~---~~~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEH---GGDPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHc---CCCCeEEEE
Confidence 6899999999999762222455667653 6999999999984 34566777777765 677899999
Q ss_pred eChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhh
Q 022960 124 HSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHA 203 (289)
Q Consensus 124 ~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (289)
|||||.+++.+|.++| . .+|+++|.......+...... .. .......+..+...+.+....+.
T Consensus 68 ~S~Gg~~a~~~a~~~~-~-~~vl~~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~~~~~~~d~~~~~~-- 130 (190)
T PRK11071 68 SSLGGYYATWLSQCFM-L-PAVVVNPAVRPFELLTDYLGE---------NE----NPYTGQQYVLESRHIYDLKVMQI-- 130 (190)
T ss_pred ECHHHHHHHHHHHHcC-C-CEEEECCCCCHHHHHHHhcCC---------cc----cccCCCcEEEcHHHHHHHHhcCC--
Confidence 9999999999999998 3 457788865532211111110 00 00001112333333333222221
Q ss_pred hhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHH
Q 022960 204 ACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIK 268 (289)
Q Consensus 204 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 268 (289)
..+...+|+++++|++|+++|++.+.++++. ++.+.++|++|.+. +.+++.+.+.+|+.
T Consensus 131 --~~i~~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f~-~~~~~~~~i~~fl~ 189 (190)
T PRK11071 131 --DPLESPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAFV-GFERYFNQIVDFLG 189 (190)
T ss_pred --ccCCChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcchh-hHHHhHHHHHHHhc
Confidence 1123478999999999999999999999884 56778899999984 33788999999974
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=201.36 Aligned_cols=219 Identities=18% Similarity=0.209 Sum_probs=144.9
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--------cccchHHHHHHHHHHHHHHHhcC
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--------LYGNYRREAEDLRAIVQDFCAKG 115 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--------~~~~~~~~~~d~~~~i~~l~~~~ 115 (289)
++++|||+||++++... |..+.+.|.+. |+|+++|+||||.|.... ...+++..++++.++++.+ +
T Consensus 1370 ~~~~vVllHG~~~s~~~--w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l---~ 1443 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGED--WIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI---T 1443 (1655)
T ss_pred CCCeEEEECCCCCCHHH--HHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh---C
Confidence 46899999999999864 89999999764 999999999999987532 1345677888888888877 6
Q ss_pred CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc----chhHhhh--------hhcCcccc-cccc
Q 022960 116 RVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG----LGYLQRI--------KQNGFIDV-RNKK 181 (289)
Q Consensus 116 ~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~----~~~~~~~--------~~~~~~~~-~~~~ 181 (289)
.++++|+||||||.+++.++.++|+ |+++|++++............. ......+ ....+... ....
T Consensus 1444 ~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 1523 (1655)
T PLN02980 1444 PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSL 1523 (1655)
T ss_pred CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhh
Confidence 7799999999999999999999999 9999999865432211100000 0000000 00000000 0000
Q ss_pred -ccccc---------ccChhhhhhhhc-------cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-----
Q 022960 182 -GKLEY---------RVTQESLMDRLS-------TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN----- 239 (289)
Q Consensus 182 -~~~~~---------~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----- 239 (289)
....+ ......+...+. .+.... ..++++|+|+|+|++|..++ +.++++.+.+++
T Consensus 1524 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~--L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~ 1600 (1655)
T PLN02980 1524 RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWED--LKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESG 1600 (1655)
T ss_pred ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHH--HhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccccc
Confidence 00000 000000110000 011111 22568999999999999874 666777777665
Q ss_pred -------cEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 240 -------HKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 240 -------~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
+++++++++||.++ ++++++++.|.+||++..
T Consensus 1601 ~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1601 NDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred ccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 48999999999966 778899999999999754
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=173.92 Aligned_cols=254 Identities=15% Similarity=0.123 Sum_probs=161.5
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC-------CCcEEEEEcCCCCCCCCcch----HHHHHHHHHcCccEEEEccccCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG-------SKQLVIVCHGFQSTKDRIPM----VNLAAALEREGISAFRFDFSGNG 86 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~-------~~~~iv~~hG~~~~~~~~~~----~~~~~~l~~~G~~v~~~d~~G~G 86 (289)
.+.+.++..+++.||..|.....+++ ++|+|+++||++.++..|.. ..++..|+++||+|+++|+||++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 46888999999999999987665421 36899999999988765321 34667789999999999999987
Q ss_pred CCCCC-------c--cccchHHHH-HHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC----ccEEEEeccCCc
Q 022960 87 ESEGS-------F--LYGNYRREA-EDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND----ISIVINISGRFN 152 (289)
Q Consensus 87 ~s~~~-------~--~~~~~~~~~-~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~ 152 (289)
.|.+. . ...++.+.+ .|+.++++++.+...++++++|||+||.+++.++ ..|+ |+.+++++|...
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 65321 1 134566777 7999999999765457899999999999998554 5665 778888887543
Q ss_pred cc---cccccccc-------------------chhHhhhhhc----C------ccccccccccccc------------cc
Q 022960 153 LK---RGIEGRLG-------------------LGYLQRIKQN----G------FIDVRNKKGKLEY------------RV 188 (289)
Q Consensus 153 ~~---~~~~~~~~-------------------~~~~~~~~~~----~------~~~~~~~~~~~~~------------~~ 188 (289)
.. ..+..... ......+... . +..+......... ..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagt 278 (395)
T PLN02872 199 LDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPS 278 (395)
T ss_pred hccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcc
Confidence 21 11110000 0000000000 0 0000000000000 00
Q ss_pred Chhhhhhhh---------ccch-------------hhhhccccc--CceEEEEEeCCCCccChhhHHHHHhhCCC-cEEE
Q 022960 189 TQESLMDRL---------STDI-------------HAACHMICQ--DCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLH 243 (289)
Q Consensus 189 ~~~~~~~~~---------~~~~-------------~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~ 243 (289)
+...+..+. ..|+ .......++ ++|+++++|++|.+++++.++.+.+.+++ .+++
T Consensus 279 S~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~ 358 (395)
T PLN02872 279 SVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELL 358 (395)
T ss_pred hHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEE
Confidence 000000000 0000 001111133 68999999999999999999999999987 6888
Q ss_pred EEcCCCcc--c-c-cCchHHHHHHHHHHHhhcC
Q 022960 244 IIEGADHE--F-T-SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 244 ~~~~~gH~--~-~-~~~~~~~~~i~~fl~~~~~ 272 (289)
.+++++|. + . +.++++.+.|.+||++..+
T Consensus 359 ~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 359 YLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred EcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 99999996 2 2 4467899999999987553
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-24 Score=181.69 Aligned_cols=241 Identities=19% Similarity=0.219 Sum_probs=163.1
Q ss_pred CcccceeeEEeeCCCCceEEEEEeecC---C---CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCC
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHETG---S---KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEG 90 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~~~---~---~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~ 90 (289)
....+.+.+++++.||.++.++++.|. + -|+||++||++.....+.+....+.|+.+||.|+.+|+||.+.-..
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 344667889999999999999988764 1 2799999999865544557788899999999999999997544322
Q ss_pred Ccc---cc-chHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccc
Q 022960 91 SFL---YG-NYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGL 163 (289)
Q Consensus 91 ~~~---~~-~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~ 163 (289)
.+. .. --....+|+.++++++.+. +.+++++.|+|+||++++..+.+.|.+++.+...+..+..........
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~- 518 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTE- 518 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccch-
Confidence 111 10 1123468888888877666 456999999999999999999999887777777665443221111000
Q ss_pred hhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----C
Q 022960 164 GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----N 239 (289)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~ 239 (289)
.+...... ....... ..+.+.. ...... ..++++|+|+|||++|..||.++++.+.+.+. +
T Consensus 519 ~~~~~~~~---------~~~~~~~-~~~~~~~---~sp~~~--~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~ 583 (620)
T COG1506 519 GLRFDPEE---------NGGGPPE-DREKYED---RSPIFY--ADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKP 583 (620)
T ss_pred hhcCCHHH---------hCCCccc-ChHHHHh---cChhhh--hcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCce
Confidence 00000000 0000000 1111111 111111 12559999999999999999999998887764 4
Q ss_pred cEEEEEcCCCccccc--CchHHHHHHHHHHHhhcCC
Q 022960 240 HKLHIIEGADHEFTS--HQDELASLVIQFIKANYQK 273 (289)
Q Consensus 240 ~~~~~~~~~gH~~~~--~~~~~~~~i~~fl~~~~~~ 273 (289)
++++++|+.+|.+.. +..+..+.+.+|+++++..
T Consensus 584 ~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 584 VELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred EEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 799999999999753 3457899999999988753
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=158.16 Aligned_cols=224 Identities=22% Similarity=0.304 Sum_probs=159.1
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITA 120 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~ 120 (289)
+..|+++++||+.++... |+.+...|+.. |..|+++|.|.||.|..... .++..+++|+..+|+..... ...++.
T Consensus 50 ~~~Pp~i~lHGl~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~-h~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV-HNYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEecccccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccc-cCHHHHHHHHHHHHHHcccccccCCce
Confidence 378999999999999976 99999999877 78999999999999986543 35789999999999988643 355899
Q ss_pred EEEeChhH-HHHHHHHHhCCC-ccEEEEeccCC-cccccccc------------------cccchhHhhh----------
Q 022960 121 IIGHSKGG-NAVLLYASKYND-ISIVINISGRF-NLKRGIEG------------------RLGLGYLQRI---------- 169 (289)
Q Consensus 121 l~G~S~Gg-~~a~~~a~~~p~-v~~~v~~~~~~-~~~~~~~~------------------~~~~~~~~~~---------- 169 (289)
++|||||| .+++..+...|+ +..+|++.-.. ........ .-.......+
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~ 206 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVR 206 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHH
Confidence 99999999 778888888898 77777664322 11100000 0000011111
Q ss_pred --hhcCcccccccccccccccChhhhhhhhcc----chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEE
Q 022960 170 --KQNGFIDVRNKKGKLEYRVTQESLMDRLST----DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLH 243 (289)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 243 (289)
....+.. ........|......+.+.+.. .+...........|||+++|.++..++.+....+.+.+|+++++
T Consensus 207 ~fi~~nl~~-~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~ 285 (315)
T KOG2382|consen 207 QFILTNLKK-SPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVH 285 (315)
T ss_pred HHHHHhcCc-CCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccchhee
Confidence 1111111 2233444555555554444433 11112211344789999999999999999999999999999999
Q ss_pred EEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 244 IIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 244 ~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
.++++||+.+ +.|+++.+.|.+|++..
T Consensus 286 ~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 286 ELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred ecccCCceeecCCHHHHHHHHHHHhccc
Confidence 9999999987 67889999999998754
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=157.25 Aligned_cols=253 Identities=21% Similarity=0.266 Sum_probs=156.4
Q ss_pred cceeeEEeeCCCCceEEEEEee-cC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccc
Q 022960 20 VQRRRVVIPNSHGEKLVGILHE-TG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN 96 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~-~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 96 (289)
+..+...+..+||..+...+.. +. .+|.||++||+.|+.++.+.+.+.+.+.++||.|+++++|||+.+........
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~y 126 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLY 126 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCccee
Confidence 3444456666777665544443 32 67899999999999888788889999999999999999999998876443222
Q ss_pred hHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC-CC--ccEEEEeccCCccccc-------cc-ccccch
Q 022960 97 YRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY-ND--ISIVINISGRFNLKRG-------IE-GRLGLG 164 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~-p~--v~~~v~~~~~~~~~~~-------~~-~~~~~~ 164 (289)
-..+.+|+..++++++.. ...++..+|.|+||.+...+..+. .+ +.+.+.++.++++... .. ......
T Consensus 127 h~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~ 206 (345)
T COG0429 127 HSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRY 206 (345)
T ss_pred cccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHH
Confidence 244459999999999886 566899999999995555555544 33 7777777766654211 11 111111
Q ss_pred hHhhhhhc---Ccccccc-cccc---cccc-cChhhhhhhhc---------cchhhhhc----ccccCceEEEEEeCCCC
Q 022960 165 YLQRIKQN---GFIDVRN-KKGK---LEYR-VTQESLMDRLS---------TDIHAACH----MICQDCRVLTIHGTKDK 223 (289)
Q Consensus 165 ~~~~~~~~---~~~~~~~-~~~~---~~~~-~~~~~~~~~~~---------~~~~~~~~----~~~~~~P~l~i~g~~D~ 223 (289)
+.+.+.+. ....... .... ...+ .+...+.+.+. .++..... ..+|.+|+|+|++.+|+
T Consensus 207 l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP 286 (345)
T COG0429 207 LLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDP 286 (345)
T ss_pred HHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCC
Confidence 11111110 0000000 0000 0000 00000001110 11111111 11579999999999999
Q ss_pred ccChhhHHHHHh-hCCCcEEEEEcCCCcc-ccc----Cch-HHHHHHHHHHHhhcC
Q 022960 224 MVPAEDALEFDK-FIPNHKLHIIEGADHE-FTS----HQD-ELASLVIQFIKANYQ 272 (289)
Q Consensus 224 ~~~~~~~~~~~~-~~~~~~~~~~~~~gH~-~~~----~~~-~~~~~i~~fl~~~~~ 272 (289)
+++++..-.... ..|++.+...+.+||. +.. ++. ...+.+.+||+..++
T Consensus 287 ~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 287 FMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred CCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 999877666655 6788999999999999 443 222 567788999987654
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=149.77 Aligned_cols=232 Identities=18% Similarity=0.187 Sum_probs=150.1
Q ss_pred CCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHH
Q 022960 31 HGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 31 ~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~ 109 (289)
+|.++.+.-++.|+ ..|++++|.-++... .|.+....|.+. -+.|+++|.||+|.|..+......+...+|...+++
T Consensus 29 ng~ql~y~~~G~G~-~~iLlipGalGs~~t-Df~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avd 106 (277)
T KOG2984|consen 29 NGTQLGYCKYGHGP-NYILLIPGALGSYKT-DFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVD 106 (277)
T ss_pred cCceeeeeecCCCC-ceeEecccccccccc-cCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHH
Confidence 47788854444333 367888888777653 355555555443 388999999999999877655444444455555554
Q ss_pred HHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccc-c----chhHhhhhhcCcccccccccc
Q 022960 110 DFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRL-G----LGYLQRIKQNGFIDVRNKKGK 183 (289)
Q Consensus 110 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~ 183 (289)
-++..+.+++.++|+|-||..|+.+|+++++ |..+|+.++.......-...+ + ..|.... ++++.+ ..+.
T Consensus 107 LM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~-R~P~e~---~Yg~ 182 (277)
T KOG2984|consen 107 LMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARG-RQPYED---HYGP 182 (277)
T ss_pred HHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhh-cchHHH---hcCH
Confidence 4444488899999999999999999999999 999999887544332111000 0 0011110 001100 0001
Q ss_pred cccccChhhhhhhh-------ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cC
Q 022960 184 LEYRVTQESLMDRL-------STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SH 255 (289)
Q Consensus 184 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~ 255 (289)
..++.....+.+.. ..+. -.....+++||+|++||++|++++...+-.+....+.+++.+.|.++|.++ ..
T Consensus 183 e~f~~~wa~wvD~v~qf~~~~dG~f-Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLry 261 (277)
T KOG2984|consen 183 ETFRTQWAAWVDVVDQFHSFCDGRF-CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRY 261 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCch-HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeec
Confidence 11111111111111 0111 111222679999999999999999999988999999999999999999987 55
Q ss_pred chHHHHHHHHHHHh
Q 022960 256 QDELASLVIQFIKA 269 (289)
Q Consensus 256 ~~~~~~~i~~fl~~ 269 (289)
+++++..+.+||++
T Consensus 262 a~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 262 AKEFNKLVLDFLKS 275 (277)
T ss_pred hHHHHHHHHHHHhc
Confidence 78999999999975
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-23 Score=146.46 Aligned_cols=142 Identities=29% Similarity=0.477 Sum_probs=112.4
Q ss_pred EEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHh--cCCceEEEEEe
Q 022960 47 LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCA--KGRVITAIIGH 124 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~--~~~~~~~l~G~ 124 (289)
+||++||++++... |..+++.|+++||.|+.+|+|++|.+... .++.++++.+.. .+.++++++||
T Consensus 1 ~vv~~HG~~~~~~~--~~~~~~~l~~~G~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD--YQPLAEALAEQGYAVVAFDYPGHGDSDGA----------DAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTTHH--HHHHHHHHHHTTEEEEEESCTTSTTSHHS----------HHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHHCCCEEEEEecCCCCccchh----------HHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 68999999998754 89999999999999999999999987321 244444444311 27789999999
Q ss_pred ChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhh
Q 022960 125 SKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAA 204 (289)
Q Consensus 125 S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (289)
|+||.+++.++.+.+.++++|++++... .. .
T Consensus 69 S~Gg~~a~~~~~~~~~v~~~v~~~~~~~-~~------------------------------------~------------ 99 (145)
T PF12695_consen 69 SMGGAIAANLAARNPRVKAVVLLSPYPD-SE------------------------------------D------------ 99 (145)
T ss_dssp THHHHHHHHHHHHSTTESEEEEESESSG-CH------------------------------------H------------
T ss_pred ccCcHHHHHHhhhccceeEEEEecCccc-hh------------------------------------h------------
Confidence 9999999999999877999999998211 00 0
Q ss_pred hcccccCceEEEEEeCCCCccChhhHHHHHhhCC-CcEEEEEcCCCcc
Q 022960 205 CHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP-NHKLHIIEGADHE 251 (289)
Q Consensus 205 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 251 (289)
.. +.+.|+++++|++|..++.+..+.+.+.++ +.+++++++++|+
T Consensus 100 ~~--~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 LA--KIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HT--TTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred hh--ccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 00 226799999999999999999999988887 5899999999995
|
... |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.5e-22 Score=149.82 Aligned_cols=130 Identities=18% Similarity=0.215 Sum_probs=105.3
Q ss_pred eEEeeCCCCceEEEEEeec-C--CCcEEEEEcCCCCCCCC--cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchH
Q 022960 24 RVVIPNSHGEKLVGILHET-G--SKQLVIVCHGFQSTKDR--IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98 (289)
Q Consensus 24 ~~~~~~~~g~~l~~~~~~~-~--~~~~iv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~ 98 (289)
.+.+++..|. +.++++.+ + ++++||++||+++.... ..|..+++.|+++||.|+.+|+||||.|.+.....++.
T Consensus 2 ~~~l~~~~g~-~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~ 80 (266)
T TIGR03101 2 PFFLDAPHGF-RFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWD 80 (266)
T ss_pred CEEecCCCCc-EEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHH
Confidence 3566766665 44545544 3 35789999999875321 34777899999999999999999999998766556778
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
.+++|+..+++++++.+..+++|+||||||.+++.++.++|+ ++++|+++|.....
T Consensus 81 ~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 889999999999987777899999999999999999999988 99999999876544
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-22 Score=138.31 Aligned_cols=195 Identities=26% Similarity=0.343 Sum_probs=150.9
Q ss_pred eeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCC---CCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccc
Q 022960 22 RRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGF---QSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN 96 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~---~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 96 (289)
..++.++..-| .+.+.+..++ ..|+.|++|.- +|+..+.....++..|.++||.++.+|+||.|.|.+..+..
T Consensus 4 ~~~v~i~Gp~G-~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G- 81 (210)
T COG2945 4 MPTVIINGPAG-RLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG- 81 (210)
T ss_pred CCcEEecCCcc-cceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC-
Confidence 34566766655 3665555544 67888999974 34444445777889999999999999999999999987654
Q ss_pred hHHHHHHHHHHHHHHHhcCCc--eEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCc
Q 022960 97 YRREAEDLRAIVQDFCAKGRV--ITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGF 174 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (289)
....+|..++++|++.+... ...|.|+|+|+++++.+|.+.|+....+.+.|........
T Consensus 82 -iGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~dfs----------------- 143 (210)
T COG2945 82 -IGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDFS----------------- 143 (210)
T ss_pred -cchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhhh-----------------
Confidence 33468999999999988433 2368999999999999999999977777777654411000
Q ss_pred ccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCccccc
Q 022960 175 IDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTS 254 (289)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 254 (289)
......+|.++|+|+.|.+++.....++++. ...+++.+++++|+|+.
T Consensus 144 -------------------------------~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~g 191 (210)
T COG2945 144 -------------------------------FLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHG 191 (210)
T ss_pred -------------------------------hccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceecc
Confidence 0002367999999999999999888888877 56788999999999998
Q ss_pred CchHHHHHHHHHHH
Q 022960 255 HQDELASLVIQFIK 268 (289)
Q Consensus 255 ~~~~~~~~i~~fl~ 268 (289)
.-..+.+.+.+|+.
T Consensus 192 Kl~~l~~~i~~~l~ 205 (210)
T COG2945 192 KLIELRDTIADFLE 205 (210)
T ss_pred cHHHHHHHHHHHhh
Confidence 88899999999995
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-21 Score=151.75 Aligned_cols=256 Identities=20% Similarity=0.239 Sum_probs=164.8
Q ss_pred CCcccceeeEEeeCCCCceEEEEEeec---------CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCC
Q 022960 16 QDPVVQRRRVVIPNSHGEKLVGILHET---------GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNG 86 (289)
Q Consensus 16 ~~~~~~~~~~~~~~~~g~~l~~~~~~~---------~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 86 (289)
..+.+..++.-++..||..+...+..+ +..|+||++||..+++...+.+.++..+.++||+|++++.||+|
T Consensus 87 ~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~ 166 (409)
T KOG1838|consen 87 SKPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLG 166 (409)
T ss_pred CCCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCC
Confidence 345677788888889999888766532 24599999999998887767888999999999999999999999
Q ss_pred CCCCCccccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC---ccEEEEeccCCcc---cccccc
Q 022960 87 ESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND---ISIVINISGRFNL---KRGIEG 159 (289)
Q Consensus 87 ~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~---~~~~~~ 159 (289)
.+.-.....--..+.+|+.+++++++++ ...++..+|.||||.+.+.++.+..+ +.+.+.++.+++. ...+..
T Consensus 167 g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~ 246 (409)
T KOG1838|consen 167 GSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIET 246 (409)
T ss_pred CCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhc
Confidence 8875543332345679999999999888 44579999999999999999988644 5555555554553 222222
Q ss_pred cccchhHhhhhhcCcccccccc-----------cccccccChhhhhhhhcc---------chhhh----hcccccCceEE
Q 022960 160 RLGLGYLQRIKQNGFIDVRNKK-----------GKLEYRVTQESLMDRLST---------DIHAA----CHMICQDCRVL 215 (289)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~---------~~~~~----~~~~~~~~P~l 215 (289)
.....+................ .......+...+.+.+.. ++... ..-.+|++|+|
T Consensus 247 ~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L 326 (409)
T KOG1838|consen 247 PLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLL 326 (409)
T ss_pred ccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEE
Confidence 2222222222222111110000 000000111111111110 00100 11115699999
Q ss_pred EEEeCCCCccChh-hHHHHHhhCCCcEEEEEcCCCcc-cccC----chHHHHH-HHHHHHhhc
Q 022960 216 TIHGTKDKMVPAE-DALEFDKFIPNHKLHIIEGADHE-FTSH----QDELASL-VIQFIKANY 271 (289)
Q Consensus 216 ~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~-~~~~----~~~~~~~-i~~fl~~~~ 271 (289)
+|++.+|+++|.+ .-....+..|++-+.+-..+||. +++. +..+.+. +.+|+....
T Consensus 327 ~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 327 CINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred EEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 9999999999984 44556667788888888889999 4433 2345555 888887654
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=151.65 Aligned_cols=195 Identities=21% Similarity=0.269 Sum_probs=128.9
Q ss_pred hHHHHHHHHHcCccEEEEccccCCCCCCCcc---ccch-HHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHH
Q 022960 63 MVNLAAALEREGISAFRFDFSGNGESEGSFL---YGNY-RREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYA 135 (289)
Q Consensus 63 ~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~~-~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a 135 (289)
|......|+++||.|+.+|+||.+....... ...+ ...++|+.++++++.++ +.+++.++|+|+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 4567788999999999999999875432211 1111 34578999999999777 567999999999999999999
Q ss_pred HhCCC-ccEEEEeccCCcccccccccccchhHh-hhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCce
Q 022960 136 SKYND-ISIVINISGRFNLKRGIEGRLGLGYLQ-RIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCR 213 (289)
Q Consensus 136 ~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 213 (289)
..+|+ ++++|..+|..+.......... +.. .....+.. ......+....... ......+++|
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~~~~~~~~~~~~-----------~~~~~~~~~~s~~~---~~~~~~~~~P 146 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI--YTKAEYLEYGDP-----------WDNPEFYRELSPIS---PADNVQIKPP 146 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC--HHHGHHHHHSST-----------TTSHHHHHHHHHGG---GGGGCGGGSE
T ss_pred cccceeeeeeeccceecchhcccccccc--cccccccccCcc-----------chhhhhhhhhcccc---ccccccCCCC
Confidence 98999 9999999998776544322111 111 01000000 00111111111111 1111014899
Q ss_pred EEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcccc--cCchHHHHHHHHHHHhhcCC
Q 022960 214 VLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEFT--SHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 214 ~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~~~~ 273 (289)
+|++||++|..||++.+..+.+.+. +++++++|++||.+. ....++.+.+.+||++++++
T Consensus 147 ~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 147 VLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp EEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred EEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999888877663 489999999999754 33357899999999998864
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=157.08 Aligned_cols=222 Identities=13% Similarity=0.189 Sum_probs=139.1
Q ss_pred CCcEEEEEcCCCCCCCC---cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHH-HHHHHHHHHHHhc-CCce
Q 022960 44 SKQLVIVCHGFQSTKDR---IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREA-EDLRAIVQDFCAK-GRVI 118 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~-~d~~~~i~~l~~~-~~~~ 118 (289)
.+++||++||...+.-. ..++.+++.|.++||+|+++|++|+|.+.... ++.+++ +++.++++++.+. +.++
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~---~~~d~~~~~~~~~v~~l~~~~~~~~ 137 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL---TLDDYINGYIDKCVDYICRTSKLDQ 137 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC---CHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 35679999997644311 12468999999999999999999999875433 445555 4578888888766 6678
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc--ccccc----------------chhHhh----hhhcC--
Q 022960 119 TAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGI--EGRLG----------------LGYLQR----IKQNG-- 173 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~--~~~~~----------------~~~~~~----~~~~~-- 173 (289)
++++||||||.+++.+++.+|+ |+++|+++++.+..... ..... ..+... +....
T Consensus 138 i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~ 217 (350)
T TIGR01836 138 ISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLG 217 (350)
T ss_pred ccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhh
Confidence 9999999999999999999998 99999999887653211 00000 000000 00000
Q ss_pred ---cccc----ccccc-----------ccccccChhhhhhhhc----cchhh---------hhcccccCceEEEEEeCCC
Q 022960 174 ---FIDV----RNKKG-----------KLEYRVTQESLMDRLS----TDIHA---------ACHMICQDCRVLTIHGTKD 222 (289)
Q Consensus 174 ---~~~~----~~~~~-----------~~~~~~~~~~~~~~~~----~~~~~---------~~~~~~~~~P~l~i~g~~D 222 (289)
+... ..... ..........+.+.+. .+... .....++++|+++++|++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D 297 (350)
T TIGR01836 218 YQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERD 297 (350)
T ss_pred hHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCC
Confidence 0000 00000 0000000001111000 00000 0011246899999999999
Q ss_pred CccChhhHHHHHhhCCC--cEEEEEcCCCcc-cccC---chHHHHHHHHHHHh
Q 022960 223 KMVPAEDALEFDKFIPN--HKLHIIEGADHE-FTSH---QDELASLVIQFIKA 269 (289)
Q Consensus 223 ~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~-~~~~---~~~~~~~i~~fl~~ 269 (289)
.++|++.++.+.+.+++ .+++.++ +||. ++.+ ++++.+.|.+||.+
T Consensus 298 ~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 298 HLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 99999999999998864 5677777 5887 3433 36899999999975
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-21 Score=145.76 Aligned_cols=174 Identities=18% Similarity=0.228 Sum_probs=121.8
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCC-----------cccc---chHHHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS-----------FLYG---NYRREAEDLRAIVQ 109 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~-----------~~~~---~~~~~~~d~~~~i~ 109 (289)
.+++||++||+|++... |..+.+.|.+.++.+..++.+|....... .... ......+.+.++++
T Consensus 15 ~~~~vIlLHG~G~~~~~--~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVA--MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCcEEEEEeCCCCChHH--HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 57899999999999975 88999999887766667667765322110 0001 11222344445555
Q ss_pred HHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccc
Q 022960 110 DFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLE 185 (289)
Q Consensus 110 ~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (289)
++..+ +.++++++|+|+||.+++.++..+|+ +.+++.+++.+.... .
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~---------------~-------------- 143 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLP---------------E-------------- 143 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccccc---------------c--------------
Confidence 55444 34589999999999999999999988 677777765321000 0
Q ss_pred cccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcccccCchHHHH
Q 022960 186 YRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEFTSHQDELAS 261 (289)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~ 261 (289)
. ....+|++++||++|+++|.+.++++.+.+. +++++.++++||.+ ..+..+
T Consensus 144 -------------------~--~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i---~~~~~~ 199 (232)
T PRK11460 144 -------------------T--APTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI---DPRLMQ 199 (232)
T ss_pred -------------------c--ccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC---CHHHHH
Confidence 0 0116799999999999999999888877664 46888999999997 356667
Q ss_pred HHHHHHHhhcC
Q 022960 262 LVIQFIKANYQ 272 (289)
Q Consensus 262 ~i~~fl~~~~~ 272 (289)
.+.+||.+.+.
T Consensus 200 ~~~~~l~~~l~ 210 (232)
T PRK11460 200 FALDRLRYTVP 210 (232)
T ss_pred HHHHHHHHHcc
Confidence 77777776653
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=156.43 Aligned_cols=232 Identities=13% Similarity=0.134 Sum_probs=144.8
Q ss_pred ceEEEEEeec---CCCcEEEEEcCCCCCCCC-----------cchHHHHH---HHHHcCccEEEEccccCCCCCC-----
Q 022960 33 EKLVGILHET---GSKQLVIVCHGFQSTKDR-----------IPMVNLAA---ALEREGISAFRFDFSGNGESEG----- 90 (289)
Q Consensus 33 ~~l~~~~~~~---~~~~~iv~~hG~~~~~~~-----------~~~~~~~~---~l~~~G~~v~~~d~~G~G~s~~----- 90 (289)
.++.|..++. .+.++||++|+++++... .+|..++- .|...-|.||++|..|-|.|..
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 4566666654 246899999999986421 12544432 2333359999999998764211
Q ss_pred ----------------CccccchHHHHHHHHHHHHHHHhcCCceEE-EEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 91 ----------------SFLYGNYRREAEDLRAIVQDFCAKGRVITA-IIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 91 ----------------~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
.+...++.++++++.++++.+ +++++. ++||||||++++.+|.++|+ |+++|++++...
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l---gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL---GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 122356788888888888877 888886 99999999999999999999 999999987543
Q ss_pred ccccccccccchhHhhh-------------------------------------hhcCcccccccccc----cccccChh
Q 022960 153 LKRGIEGRLGLGYLQRI-------------------------------------KQNGFIDVRNKKGK----LEYRVTQE 191 (289)
Q Consensus 153 ~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~----~~~~~~~~ 191 (289)
................+ ....+......... .......+
T Consensus 198 ~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e 277 (389)
T PRK06765 198 NDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFE 277 (389)
T ss_pred CChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHH
Confidence 32111000000000000 00000000000000 00000111
Q ss_pred hhhhhh--------c-------------c-------chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----C
Q 022960 192 SLMDRL--------S-------------T-------DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----N 239 (289)
Q Consensus 192 ~~~~~~--------~-------------~-------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~ 239 (289)
.+.... . . +.... ..++++|+|+|+|++|.++|++.++.+.+.++ +
T Consensus 278 ~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~--L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~ 355 (389)
T PRK06765 278 KEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEA--LSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKY 355 (389)
T ss_pred HHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHH--HhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCC
Confidence 111100 0 0 11111 12468999999999999999999999999886 6
Q ss_pred cEEEEEcC-CCcccc-cCchHHHHHHHHHHHh
Q 022960 240 HKLHIIEG-ADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 240 ~~~~~~~~-~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
++++++++ +||..+ ++++++.+.|.+||++
T Consensus 356 a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 356 AEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred eEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 89999986 899955 7788999999999965
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-21 Score=140.86 Aligned_cols=241 Identities=14% Similarity=0.149 Sum_probs=146.6
Q ss_pred eeEEeeCCCCceEEEEEeec--CCCcEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCCc-cccchH
Q 022960 23 RRVVIPNSHGEKLVGILHET--GSKQLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGSF-LYGNYR 98 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~--~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~-~~~~~~ 98 (289)
+++.++..++ ++..|+..+ ..+|.++++||+|.+.-+ |..++..|... ..+|+++|+||||++.-.. ...+.+
T Consensus 51 edv~i~~~~~-t~n~Y~t~~~~t~gpil~l~HG~G~S~LS--fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~e 127 (343)
T KOG2564|consen 51 EDVSIDGSDL-TFNVYLTLPSATEGPILLLLHGGGSSALS--FAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLE 127 (343)
T ss_pred cccccCCCcc-eEEEEEecCCCCCccEEEEeecCcccchh--HHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHH
Confidence 4455554443 455554443 478999999999999976 89999998875 5678889999999997544 456788
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC--CCccEEEEeccCCccc----cccc----------cccc
Q 022960 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY--NDISIVINISGRFNLK----RGIE----------GRLG 162 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~--p~v~~~v~~~~~~~~~----~~~~----------~~~~ 162 (289)
.++.|+.++++++-.....+++||||||||.+|...|... |.+.+++.++-.-... ..+. +.+.
T Consensus 128 T~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~ 207 (343)
T KOG2564|consen 128 TMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIE 207 (343)
T ss_pred HHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEEEEechHHHHHHHHHHHHHhcCCccccchh
Confidence 9999999999999877777899999999999998887764 5688888876321100 0000 0000
Q ss_pred chhHhhhhhcCccc-------c-----ccccc-ccccccChhhhhhhh---ccchhhhhcccccCceEEEEEeCCCCccC
Q 022960 163 LGYLQRIKQNGFID-------V-----RNKKG-KLEYRVTQESLMDRL---STDIHAACHMICQDCRVLTIHGTKDKMVP 226 (289)
Q Consensus 163 ~~~~~~~~~~~~~~-------~-----~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 226 (289)
......+....... + ....+ .+.|+........++ ......... ...+|-++|.+..|.+-
T Consensus 208 ~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl--~~p~~klLilAg~d~LD- 284 (343)
T KOG2564|consen 208 DAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFL--GLPVPKLLILAGVDRLD- 284 (343)
T ss_pred hHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhh--CCCccceeEEecccccC-
Confidence 00000000000000 0 00111 233333322222222 121112111 33677777777776532
Q ss_pred hhhHHHHHhhCCCcEEEEEcCCCcccccC-chHHHHHHHHHHHhhc
Q 022960 227 AEDALEFDKFIPNHKLHIIEGADHEFTSH-QDELASLVIQFIKANY 271 (289)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~i~~fl~~~~ 271 (289)
.+. .+-+.-...++.+++.+||+.+++ |.+++..+..|..++.
T Consensus 285 kdL--tiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 285 KDL--TIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred cce--eeeeeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 111 011111246899999999999965 5789999999987653
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-20 Score=146.79 Aligned_cols=236 Identities=18% Similarity=0.193 Sum_probs=146.3
Q ss_pred CCcccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCC
Q 022960 16 QDPVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 16 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 91 (289)
..+.+...+++|.+.+|..+++++..|. +.|+||.+||.++.... +.... .++..||.|+.+|.||+|.....
T Consensus 50 ~~~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~--~~~~~-~~a~~G~~vl~~d~rGqg~~~~d 126 (320)
T PF05448_consen 50 PTPGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGD--PFDLL-PWAAAGYAVLAMDVRGQGGRSPD 126 (320)
T ss_dssp SBSSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGG--HHHHH-HHHHTT-EEEEE--TTTSSSS-B
T ss_pred CCCCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCC--ccccc-ccccCCeEEEEecCCCCCCCCCC
Confidence 3456778899999999999999988664 56899999999998643 44433 46788999999999999932210
Q ss_pred --------------------ccccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEec
Q 022960 92 --------------------FLYGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINIS 148 (289)
Q Consensus 92 --------------------~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~ 148 (289)
....-+.....|...+++.+... +.++|.+.|.|+||.+++.+|+..++|++++...
T Consensus 127 ~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~v 206 (320)
T PF05448_consen 127 YRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADV 206 (320)
T ss_dssp -SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEES
T ss_pred ccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecC
Confidence 11122345568999999999877 4579999999999999999999999999999988
Q ss_pred cCCccccccccccc-----chhHhhhhhcCcccccccccccccccChhhhhhhhc-cchhhhhcccccCceEEEEEeCCC
Q 022960 149 GRFNLKRGIEGRLG-----LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLS-TDIHAACHMICQDCRVLTIHGTKD 222 (289)
Q Consensus 149 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~l~i~g~~D 222 (289)
|.+.-......... ..+...+... . ......+.+.+.+. .|...... +|++|+++-.|-.|
T Consensus 207 P~l~d~~~~~~~~~~~~~y~~~~~~~~~~------d-----~~~~~~~~v~~~L~Y~D~~nfA~--ri~~pvl~~~gl~D 273 (320)
T PF05448_consen 207 PFLCDFRRALELRADEGPYPEIRRYFRWR------D-----PHHEREPEVFETLSYFDAVNFAR--RIKCPVLFSVGLQD 273 (320)
T ss_dssp ESSSSHHHHHHHT--STTTHHHHHHHHHH------S-----CTHCHHHHHHHHHHTT-HHHHGG--G--SEEEEEEETT-
T ss_pred CCccchhhhhhcCCccccHHHHHHHHhcc------C-----CCcccHHHHHHHHhhhhHHHHHH--HcCCCEEEEEecCC
Confidence 86543222111100 0011111000 0 00001111111111 11122222 46999999999999
Q ss_pred CccChhhHHHHHhhCC-CcEEEEEcCCCcccccCchHH-HHHHHHHHHhh
Q 022960 223 KMVPAEDALEFDKFIP-NHKLHIIEGADHEFTSHQDEL-ASLVIQFIKAN 270 (289)
Q Consensus 223 ~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~-~~~i~~fl~~~ 270 (289)
+++|+......++.++ .+++.+++..||.. ..+. .+...+||.++
T Consensus 274 ~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~---~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 274 PVCPPSTQFAAYNAIPGPKELVVYPEYGHEY---GPEFQEDKQLNFLKEH 320 (320)
T ss_dssp SSS-HHHHHHHHCC--SSEEEEEETT--SST---THHHHHHHHHHHHHH-
T ss_pred CCCCchhHHHHHhccCCCeeEEeccCcCCCc---hhhHHHHHHHHHHhcC
Confidence 9999999999999987 48999999999975 3444 67788888763
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.6e-22 Score=150.52 Aligned_cols=187 Identities=25% Similarity=0.311 Sum_probs=118.5
Q ss_pred ccEEEEccccCCCCCC----CccccchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEecc
Q 022960 75 ISAFRFDFSGNGESEG----SFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISG 149 (289)
Q Consensus 75 ~~v~~~d~~G~G~s~~----~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 149 (289)
|+|+++|+||+|.|+. .....+..+.++++..+++.+ +.++++++||||||.+++.++..+|+ |+++|++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~ 77 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL---GIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISP 77 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH---TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh---CCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEee
Confidence 6899999999999995 234556677788888888877 77789999999999999999999999 999999998
Q ss_pred CC----ccccccccc--ccchhHhhhhh---cCc----cccc---------------cccc-ccccc-cChhhhhhhhc-
Q 022960 150 RF----NLKRGIEGR--LGLGYLQRIKQ---NGF----IDVR---------------NKKG-KLEYR-VTQESLMDRLS- 198 (289)
Q Consensus 150 ~~----~~~~~~~~~--~~~~~~~~~~~---~~~----~~~~---------------~~~~-~~~~~-~~~~~~~~~~~- 198 (289)
+. ......... ........... ... .... .... ..... ...........
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (230)
T PF00561_consen 78 PPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWN 157 (230)
T ss_dssp SSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred eccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccc
Confidence 62 111000000 00000000000 000 0000 0000 00000 00000000000
Q ss_pred -----cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHH
Q 022960 199 -----TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVI 264 (289)
Q Consensus 199 -----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 264 (289)
..........++++|+++++|++|.++|++....+.+.+|+.+++.++++||..+ ++++++.+.|.
T Consensus 158 ~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 158 ALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0000011112479999999999999999999999999999999999999999955 66777777664
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-20 Score=140.57 Aligned_cols=179 Identities=20% Similarity=0.292 Sum_probs=120.0
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCC-CCCCcc--ccc--------hHHHHHHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGE-SEGSFL--YGN--------YRREAEDLRAIVQDFC 112 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~-s~~~~~--~~~--------~~~~~~d~~~~i~~l~ 112 (289)
+.|.||++|+..|-.. ..+.+++.|++.||.|+++|+-+-.. ...... ... .+....++.+++++|+
T Consensus 13 ~~~~Vvv~~d~~G~~~--~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNP--NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SEEEEEEE-BTTBS-H--HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCch--HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 4789999999988773 37889999999999999999864333 111110 001 2345678889999998
Q ss_pred hcC---CceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccC
Q 022960 113 AKG---RVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVT 189 (289)
Q Consensus 113 ~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (289)
++. .+++.++|+|+||.+++.++...+.++++|...|.......
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~~~--------------------------------- 137 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPPPP--------------------------------- 137 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGGGH---------------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCCcc---------------------------------
Confidence 874 56999999999999999999888669999988871110000
Q ss_pred hhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----CCcEEEEEcCCCcccccC---------c
Q 022960 190 QESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI----PNHKLHIIEGADHEFTSH---------Q 256 (289)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~---------~ 256 (289)
. ....++++|+++++|++|+.++.+..+.+.+.+ ...++++|+|++|.|... .
T Consensus 138 ------------~--~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa 203 (218)
T PF01738_consen 138 ------------L--EDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAA 203 (218)
T ss_dssp ------------H--HHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHH
T ss_pred ------------h--hhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHH
Confidence 0 000134889999999999999998777766555 468999999999998632 1
Q ss_pred hHHHHHHHHHHHhhc
Q 022960 257 DELASLVIQFIKANY 271 (289)
Q Consensus 257 ~~~~~~i~~fl~~~~ 271 (289)
++..+.+.+||++++
T Consensus 204 ~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 204 EDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHhcC
Confidence 356778888887654
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-20 Score=147.29 Aligned_cols=235 Identities=21% Similarity=0.238 Sum_probs=137.8
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcccc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYG 95 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~ 95 (289)
+.+.+++.|+.. |.+|.++++-|. +.|+||++.|+.+.... ++..+.+.|+.+|+.++++|.||.|.|.......
T Consensus 162 ~~~i~~v~iP~e-g~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD-~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~ 239 (411)
T PF06500_consen 162 DYPIEEVEIPFE-GKTIPGYLHLPSGEKPYPTVIVCGGLDSLQED-LYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQ 239 (411)
T ss_dssp SSEEEEEEEEET-TCEEEEEEEESSSSS-EEEEEEE--TTS-GGG-GHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S
T ss_pred CCCcEEEEEeeC-CcEEEEEEEcCCCCCCCCEEEEeCCcchhHHH-HHHHHHHHHHhCCCEEEEEccCCCcccccCCCCc
Confidence 445677788765 478888877554 45778888787777764 4566667899999999999999999986544333
Q ss_pred chHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc---cccccccchhHhh
Q 022960 96 NYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR---GIEGRLGLGYLQR 168 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~---~~~~~~~~~~~~~ 168 (289)
+.+.. ..++++++... +..+|.++|.|+||++|.++|...+. ++++|..++.....- .........+...
T Consensus 240 D~~~l---~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~ 316 (411)
T PF06500_consen 240 DSSRL---HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDV 316 (411)
T ss_dssp -CCHH---HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHH
T ss_pred CHHHH---HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHH
Confidence 33333 34566777655 55699999999999999999987755 999999998654221 1111111111111
Q ss_pred hhhcCcccccccccccccccChhhhhhhhccc-h--hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEE
Q 022960 169 IKQNGFIDVRNKKGKLEYRVTQESLMDRLSTD-I--HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHII 245 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (289)
+... .+.. ....+.+...+..- . .......+..+|+|.+.+++|+++|.+..+-++..-.+.+...+
T Consensus 317 LA~r--------lG~~--~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~ 386 (411)
T PF06500_consen 317 LASR--------LGMA--AVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRI 386 (411)
T ss_dssp HHHH--------CT-S--CE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE
T ss_pred HHHH--------hCCc--cCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeec
Confidence 1110 0000 01122222221111 1 11111234588999999999999999999999888777888888
Q ss_pred cCCC-cccccCchHHHHHHHHHHHhhc
Q 022960 246 EGAD-HEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 246 ~~~g-H~~~~~~~~~~~~i~~fl~~~~ 271 (289)
+... |.- -++.+..+.+||++.+
T Consensus 387 ~~~~~~~g---y~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 387 PSKPLHMG---YPQALDEIYKWLEDKL 410 (411)
T ss_dssp -SSSHHHH---HHHHHHHHHHHHHHHH
T ss_pred CCCccccc---hHHHHHHHHHHHHHhc
Confidence 8644 432 3578889999998764
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=149.83 Aligned_cols=205 Identities=12% Similarity=0.131 Sum_probs=127.7
Q ss_pred CCcEEEEEcCCCCCCCCcch-----HHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHH-HHHHHHHHHHHhc-CC
Q 022960 44 SKQLVIVCHGFQSTKDRIPM-----VNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREA-EDLRAIVQDFCAK-GR 116 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~-~d~~~~i~~l~~~-~~ 116 (289)
.+++||++||+.... +.+ ..+++.|.++||+|+++|++|+|.+..... +++++ +++.++++.+.+. +.
T Consensus 187 ~~~PlLiVp~~i~k~--yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~---~ddY~~~~i~~al~~v~~~~g~ 261 (532)
T TIGR01838 187 HKTPLLIVPPWINKY--YILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT---FDDYIRDGVIAALEVVEAITGE 261 (532)
T ss_pred CCCcEEEECcccccc--eeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC---hhhhHHHHHHHHHHHHHHhcCC
Confidence 468999999997665 334 379999999999999999999998865432 23333 4566777766554 77
Q ss_pred ceEEEEEeChhHHHHH----HHHHhC-CC-ccEEEEeccCCccccccc--ccccchh---H-hhhhhcCccc--------
Q 022960 117 VITAIIGHSKGGNAVL----LYASKY-ND-ISIVINISGRFNLKRGIE--GRLGLGY---L-QRIKQNGFID-------- 176 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~----~~a~~~-p~-v~~~v~~~~~~~~~~~~~--~~~~~~~---~-~~~~~~~~~~-------- 176 (289)
++++++|||+||.++. .+++.. ++ |++++++++..++...-. ....... . ..+...++..
T Consensus 262 ~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F 341 (532)
T TIGR01838 262 KQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTF 341 (532)
T ss_pred CCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHH
Confidence 8999999999999852 245555 66 999999998877543210 0000000 0 0000000000
Q ss_pred -c---------------cccccc--c---cc-----ccChhhhhhh----hccchhh---------hhcccccCceEEEE
Q 022960 177 -V---------------RNKKGK--L---EY-----RVTQESLMDR----LSTDIHA---------ACHMICQDCRVLTI 217 (289)
Q Consensus 177 -~---------------~~~~~~--~---~~-----~~~~~~~~~~----~~~~~~~---------~~~~~~~~~P~l~i 217 (289)
. ...... . .| .+......+. +..+... .....++++|+|++
T Consensus 342 ~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV 421 (532)
T TIGR01838 342 SLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYII 421 (532)
T ss_pred HhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEE
Confidence 0 000000 0 00 0000111111 1111100 01112579999999
Q ss_pred EeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc
Q 022960 218 HGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT 253 (289)
Q Consensus 218 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 253 (289)
+|++|.++|++.++.+.+.+++.+..+++++||..+
T Consensus 422 ~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 422 ATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAG 457 (532)
T ss_pred eeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchH
Confidence 999999999999999999999999999999999854
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.6e-19 Score=132.05 Aligned_cols=199 Identities=20% Similarity=0.252 Sum_probs=150.8
Q ss_pred eeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccC-CCCCCCc----c-
Q 022960 23 RRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGN-GESEGSF----L- 93 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-G~s~~~~----~- 93 (289)
+.+.++..+ ..+.+++..|. ..|.||++|+..+-... .+.+++.|++.||.|+++|+-+. |.+.... .
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~--i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~ 79 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNPH--IRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAEL 79 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCchH--HHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHH
Confidence 456777766 67777766543 34899999999998854 89999999999999999998763 3322111 0
Q ss_pred ------ccchHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccch
Q 022960 94 ------YGNYRREAEDLRAIVQDFCAKG---RVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLG 164 (289)
Q Consensus 94 ------~~~~~~~~~d~~~~i~~l~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~ 164 (289)
.........|+.+.+++|..+. .++|.++|+||||.+++.++...|++++.+...|.........
T Consensus 80 ~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~~~~~------ 153 (236)
T COG0412 80 ETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTAD------ 153 (236)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCCcccc------
Confidence 1122566799999999998774 6789999999999999999999889999998877543211100
Q ss_pred hHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----Cc
Q 022960 165 YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NH 240 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~ 240 (289)
..++++|+|+.+|+.|..+|......+.+.+. ..
T Consensus 154 ------------------------------------------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~ 191 (236)
T COG0412 154 ------------------------------------------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKV 191 (236)
T ss_pred ------------------------------------------cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCe
Confidence 11458999999999999999887777766653 47
Q ss_pred EEEEEcCCCcccccC-----c-------hHHHHHHHHHHHhhcC
Q 022960 241 KLHIIEGADHEFTSH-----Q-------DELASLVIQFIKANYQ 272 (289)
Q Consensus 241 ~~~~~~~~gH~~~~~-----~-------~~~~~~i~~fl~~~~~ 272 (289)
++.+++++.|.|+.. . ++.++.+.+||++.+.
T Consensus 192 ~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 192 DLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred eEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 889999999998732 1 3578889999988764
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=162.80 Aligned_cols=225 Identities=14% Similarity=0.181 Sum_probs=140.6
Q ss_pred CCcEEEEEcCCCCCCCCcchHH-----HHHHHHHcCccEEEEccccCCCCCCCcc--ccchHHHHHHHHHHHHHHHhcCC
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVN-----LAAALEREGISAFRFDFSGNGESEGSFL--YGNYRREAEDLRAIVQDFCAKGR 116 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~-----~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~~~ 116 (289)
.+++||++||++.+.. .|+. +.+.|.++||+|+++|+ |.++.+.. ..++.+.+..+.++++.++....
T Consensus 66 ~~~plllvhg~~~~~~--~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~ 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSAD--MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTG 140 (994)
T ss_pred CCCcEEEECCCCCCcc--ceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhC
Confidence 5689999999998884 4665 47899999999999995 55544322 23555556666666666554555
Q ss_pred ceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCccccccccc-------ccchh-----Hhh------hhhcC---
Q 022960 117 VITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKRGIEGR-------LGLGY-----LQR------IKQNG--- 173 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~~~~~-------~~~~~-----~~~------~~~~~--- 173 (289)
++++++||||||.+++.+++.+ ++ |+++|+++++.++....... ....+ ... +....
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 6899999999999999988755 54 99999988876543210000 00000 000 00000
Q ss_pred ---------cc----ccccccc------------cccc-ccCh---hhhhhhhcc-chh------hh---hcccccCceE
Q 022960 174 ---------FI----DVRNKKG------------KLEY-RVTQ---ESLMDRLST-DIH------AA---CHMICQDCRV 214 (289)
Q Consensus 174 ---------~~----~~~~~~~------------~~~~-~~~~---~~~~~~~~~-~~~------~~---~~~~~~~~P~ 214 (289)
+. ....... ...| .... ..+...+.. +.. .. ....++++|+
T Consensus 221 l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~ 300 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPV 300 (994)
T ss_pred cChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCE
Confidence 00 0000000 0000 0000 011111110 000 00 0123568999
Q ss_pred EEEEeCCCCccChhhHHHHHhhCCCcEE-EEEcCCCcccc----cCchHHHHHHHHHHHhhcCC
Q 022960 215 LTIHGTKDKMVPAEDALEFDKFIPNHKL-HIIEGADHEFT----SHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 215 l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~----~~~~~~~~~i~~fl~~~~~~ 273 (289)
|+++|++|.++|++.++.+.+.++++++ .+++++||+.+ .-+++++..|.+||.++...
T Consensus 301 L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 301 LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 9999999999999999999999999987 67899999944 23578999999999987643
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.7e-19 Score=151.38 Aligned_cols=242 Identities=12% Similarity=0.060 Sum_probs=160.9
Q ss_pred ccceeeEEeeCCCCceEEEE-Eeec-----CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 19 VVQRRRVVIPNSHGEKLVGI-LHET-----GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~-~~~~-----~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
....+.+.+++.||.++.++ ++.+ ++.|+||++||..+......|......|.++||.|+.++.||-|.-....
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w 492 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQW 492 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHH
Confidence 45788899999999999985 4433 35699999999888775555777777899999999999999876554322
Q ss_pred ccc----chHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccch
Q 022960 93 LYG----NYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLG 164 (289)
Q Consensus 93 ~~~----~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~ 164 (289)
... .-....+|+.+++++|.++ +.+++++.|.|.||+++..++.++|+ ++++|+..|..++...+.......
T Consensus 493 ~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~ 572 (686)
T PRK10115 493 YEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPL 572 (686)
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCC
Confidence 111 0013368999999999877 46799999999999999999999999 999999999887654331110000
Q ss_pred hHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCce-EEEEEeCCCCccChhhHHHHHhhCC----C
Q 022960 165 YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCR-VLTIHGTKDKMVPAEDALEFDKFIP----N 239 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~----~ 239 (289)
....... + +. ....+............... +++.| +|+++|.+|..||+.++.++...+. +
T Consensus 573 ~~~~~~e--~-------G~---p~~~~~~~~l~~~SP~~~v~--~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~ 638 (686)
T PRK10115 573 TTGEFEE--W-------GN---PQDPQYYEYMKSYSPYDNVT--AQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTD 638 (686)
T ss_pred ChhHHHH--h-------CC---CCCHHHHHHHHHcCchhccC--ccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCC
Confidence 0000000 0 00 00111111111122222222 23678 6677999999999999988877763 3
Q ss_pred cEEEEE---cCCCcccccCchHH---HHHHHHHHHhhcCCC
Q 022960 240 HKLHII---EGADHEFTSHQDEL---ASLVIQFIKANYQKD 274 (289)
Q Consensus 240 ~~~~~~---~~~gH~~~~~~~~~---~~~i~~fl~~~~~~~ 274 (289)
.+++++ +++||.......+. ......||-..+..+
T Consensus 639 ~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~~ 679 (686)
T PRK10115 639 DHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQGT 679 (686)
T ss_pred CceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCCc
Confidence 567777 89999954433333 333466777766554
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-18 Score=134.97 Aligned_cols=225 Identities=16% Similarity=0.123 Sum_probs=128.7
Q ss_pred eeeEEeeCC-CCceEEEEEeec-----CCCcEEEEEcCCCCCCCCcchHHHHHHH-HHcCccEEEEcc--ccCCCCCCCc
Q 022960 22 RRRVVIPNS-HGEKLVGILHET-----GSKQLVIVCHGFQSTKDRIPMVNLAAAL-EREGISAFRFDF--SGNGESEGSF 92 (289)
Q Consensus 22 ~~~~~~~~~-~g~~l~~~~~~~-----~~~~~iv~~hG~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~--~G~G~s~~~~ 92 (289)
.+..++.+. .+..+.+.++.| ++.|+|+++||++++...+.+......+ .+.|+.|+++|. +|+|.+....
T Consensus 13 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~ 92 (275)
T TIGR02821 13 QGFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDD 92 (275)
T ss_pred EEEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcc
Confidence 344444432 355666666544 2578999999999988763333333444 456999999998 5555332100
Q ss_pred --------------------cccchH-HHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccC
Q 022960 93 --------------------LYGNYR-REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGR 150 (289)
Q Consensus 93 --------------------~~~~~~-~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~ 150 (289)
....+. ..++++..+++.....+.++++++||||||++++.++.++|+ ++++++++|.
T Consensus 93 ~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 93 AWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred cccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 001111 223455555554212256789999999999999999999999 9999999987
Q ss_pred CcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccCh-hh
Q 022960 151 FNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPA-ED 229 (289)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~ 229 (289)
.+.... ............. ... .+. . .+............|+++.+|+.|+.+|. ..
T Consensus 173 ~~~~~~---~~~~~~~~~~l~~--------~~~-~~~--------~--~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~ 230 (275)
T TIGR02821 173 VAPSRC---PWGQKAFSAYLGA--------DEA-AWR--------S--YDASLLVADGGRHSTILIDQGTADQFLDEQLR 230 (275)
T ss_pred cCcccC---cchHHHHHHHhcc--------ccc-chh--------h--cchHHHHhhcccCCCeeEeecCCCcccCcccc
Confidence 654211 0000011111000 000 000 0 00000011112367999999999999997 44
Q ss_pred HHHHHhhC----CCcEEEEEcCCCcccccCchHHHHHHHHHHHh
Q 022960 230 ALEFDKFI----PNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 230 ~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
...+.+.+ ..+++..++|.+|.+.. -..+.....+|..+
T Consensus 231 ~~~~~~~l~~~g~~v~~~~~~g~~H~f~~-~~~~~~~~~~~~~~ 273 (275)
T TIGR02821 231 PDAFEQACRAAGQALTLRRQAGYDHSYYF-IASFIADHLRHHAE 273 (275)
T ss_pred HHHHHHHHHHcCCCeEEEEeCCCCccchh-HHHhHHHHHHHHHh
Confidence 44444443 34789999999999742 23444455555544
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=131.41 Aligned_cols=221 Identities=14% Similarity=0.167 Sum_probs=146.2
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH-HHhcCCceEE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD-FCAKGRVITA 120 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~-l~~~~~~~~~ 120 (289)
++.++.++++|-.|+++. .|+.+...|... +.++.+++||+|..-+.+...++..+++.+...+.. . ...++.
T Consensus 4 ~~~~~~L~cfP~AGGsa~--~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~---~d~P~a 77 (244)
T COG3208 4 PGARLRLFCFPHAGGSAS--LFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPL---LDAPFA 77 (244)
T ss_pred CCCCceEEEecCCCCCHH--HHHHHHhhCCch-hheeeecCCCcccccCCcccccHHHHHHHHHHHhcccc---CCCCee
Confidence 346678888998888884 488899888774 999999999999887777677778888777777763 3 344799
Q ss_pred EEEeChhHHHHHHHHHhCCC----ccEEEEeccC---CcccccccccccchhHhhhhhcCcccccccccccccccChhhh
Q 022960 121 IIGHSKGGNAVLLYASKYND----ISIVINISGR---FNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESL 193 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (289)
++||||||.+|.++|.+..+ +.++.+.+.. ......+.......+...+...+..............+....+
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPil 157 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPIL 157 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHH
Confidence 99999999999999987633 5556655432 2223334444445555555443322111111111111111111
Q ss_pred hhhh-ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC-CcEEEEEcCCCcccccC-chHHHHHHHHHHHh
Q 022960 194 MDRL-STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP-NHKLHIIEGADHEFTSH-QDELASLVIQFIKA 269 (289)
Q Consensus 194 ~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~-~~~~~~~i~~fl~~ 269 (289)
...+ ............++||+.++.|++|..+..+....+.+..+ ..++..++| ||+++.+ .+++...|.+.+..
T Consensus 158 RAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 158 RADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred HHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhhh
Confidence 1111 11111112223679999999999999999999999998887 589999996 9998754 46777777777753
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-18 Score=133.77 Aligned_cols=195 Identities=17% Similarity=0.196 Sum_probs=125.9
Q ss_pred eEEEEEeec---CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH
Q 022960 34 KLVGILHET---GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 34 ~l~~~~~~~---~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 110 (289)
.+.+.++.| ++.|+||++||++.+.. .|..+++.|+++||.|+++|++|++.+... ...++..+++++
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~--~y~~l~~~Las~G~~VvapD~~g~~~~~~~-------~~i~d~~~~~~~ 108 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNS--FYSQLLQHIASHGFIVVAPQLYTLAGPDGT-------DEIKDAAAVINW 108 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcc--cHHHHHHHHHhCCCEEEEecCCCcCCCCch-------hhHHHHHHHHHH
Confidence 344445533 36789999999998875 489999999999999999999986533211 112334444444
Q ss_pred HHh-----------cCCceEEEEEeChhHHHHHHHHHhCCC------ccEEEEeccCCcccccccccccchhHhhhhhcC
Q 022960 111 FCA-----------KGRVITAIIGHSKGGNAVLLYASKYND------ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNG 173 (289)
Q Consensus 111 l~~-----------~~~~~~~l~G~S~Gg~~a~~~a~~~p~------v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (289)
+.+ .+.++++++|||+||.+++.++..+++ ++++|+++|......... ...
T Consensus 109 l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~--~~p---------- 176 (313)
T PLN00021 109 LSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ--TPP---------- 176 (313)
T ss_pred HHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC--CCC----------
Confidence 432 144689999999999999999988863 788898887543321100 000
Q ss_pred cccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCC-----c----cChhh-HHHHHhhCC-CcEE
Q 022960 174 FIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDK-----M----VPAED-ALEFDKFIP-NHKL 242 (289)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~-----~----~~~~~-~~~~~~~~~-~~~~ 242 (289)
.... .......+.+|+|++.+..|. . .|... ..++++.++ .+.+
T Consensus 177 ------------------~il~-------~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~ 231 (313)
T PLN00021 177 ------------------PVLT-------YAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVH 231 (313)
T ss_pred ------------------cccc-------cCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeee
Confidence 0000 000111247899999998763 2 22333 366777764 6888
Q ss_pred EEEcCCCcccc-cCc-----------------------hHHHHHHHHHHHhhcCCC
Q 022960 243 HIIEGADHEFT-SHQ-----------------------DELASLVIQFIKANYQKD 274 (289)
Q Consensus 243 ~~~~~~gH~~~-~~~-----------------------~~~~~~i~~fl~~~~~~~ 274 (289)
.+++++||.-+ ++. +.+...+..||...+...
T Consensus 232 ~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 232 FVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred eeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 89999999943 221 134557788998887654
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.82 E-value=3e-18 Score=133.45 Aligned_cols=202 Identities=17% Similarity=0.157 Sum_probs=119.1
Q ss_pred CCCceEEEEEeec-----CCCcEEEEEcCCCCCCCCcch-HHHHHHHHHcCccEEEEccccCCCC-----CC------Cc
Q 022960 30 SHGEKLVGILHET-----GSKQLVIVCHGFQSTKDRIPM-VNLAAALEREGISAFRFDFSGNGES-----EG------SF 92 (289)
Q Consensus 30 ~~g~~l~~~~~~~-----~~~~~iv~~hG~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~~G~G~s-----~~------~~ 92 (289)
.-|..+.+.++-| .+.|+|+++||++++...+.. ..+.+.+...|+.|+.+|..++|.. .. ..
T Consensus 27 ~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~ 106 (283)
T PLN02442 27 TLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAG 106 (283)
T ss_pred ccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcc
Confidence 3455666665533 256899999999988754211 2344666777999999998876621 10 00
Q ss_pred -----cc-----cch-HHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc
Q 022960 93 -----LY-----GNY-RREAEDLRAIVQDFCA-KGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG 159 (289)
Q Consensus 93 -----~~-----~~~-~~~~~d~~~~i~~l~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~ 159 (289)
.. ..+ ....+++..+++.... .+.++++++||||||+.|+.++.++|+ ++++++++|..+.....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-- 184 (283)
T PLN02442 107 FYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCP-- 184 (283)
T ss_pred eeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCc--
Confidence 00 011 1133455555544322 267789999999999999999999999 99999999876532110
Q ss_pred cccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhh-hcccccCceEEEEEeCCCCccChh-hHHHHHhhC
Q 022960 160 RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAA-CHMICQDCRVLTIHGTKDKMVPAE-DALEFDKFI 237 (289)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~ 237 (289)
......... +.. ..... ... +.... ......++|+++++|++|.+++.. .++.+.+.+
T Consensus 185 -~~~~~~~~~----~g~------------~~~~~-~~~--d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l 244 (283)
T PLN02442 185 -WGQKAFTNY----LGS------------DKADW-EEY--DATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEAC 244 (283)
T ss_pred -hhhHHHHHH----cCC------------ChhhH-HHc--ChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHH
Confidence 000001100 000 00000 000 00000 001124789999999999998863 244443332
Q ss_pred ----CCcEEEEEcCCCcccc
Q 022960 238 ----PNHKLHIIEGADHEFT 253 (289)
Q Consensus 238 ----~~~~~~~~~~~gH~~~ 253 (289)
.++++.++++.+|.+.
T Consensus 245 ~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 245 KEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHcCCCeEEEEeCCCCccHH
Confidence 3579999999999864
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-18 Score=134.67 Aligned_cols=227 Identities=15% Similarity=0.138 Sum_probs=137.9
Q ss_pred cceeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCC-cchHHHHHHHHHc-CccEEEEccccCCCCCCCcccc
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDR-IPMVNLAAALERE-GISAFRFDFSGNGESEGSFLYG 95 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~ 95 (289)
+..+++.++..+| .+..+++.|. +.|+||++||++....+ ..+..+.+.|++. |+.|+.+|+|...+.
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~------- 126 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA------- 126 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC-------
Confidence 4567788887777 4666666553 46899999998843211 2367788888874 999999999964332
Q ss_pred chHHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhC------CC-ccEEEEeccCCccccccc-ccc
Q 022960 96 NYRREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKY------ND-ISIVINISGRFNLKRGIE-GRL 161 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~------p~-v~~~v~~~~~~~~~~~~~-~~~ 161 (289)
.+....+|+.++++++.++ +.++++|+|+|+||.+++.++... +. ++++|+++|..+...... ...
T Consensus 127 ~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~ 206 (318)
T PRK10162 127 RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLL 206 (318)
T ss_pred CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHh
Confidence 2334467777777777543 346899999999999999988753 23 899999998776421100 000
Q ss_pred cch-------hHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHH
Q 022960 162 GLG-------YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFD 234 (289)
Q Consensus 162 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 234 (289)
... -...+......+ .....+........... .--.|+++++|+.|++.+ ..+.+.
T Consensus 207 ~~~~~~l~~~~~~~~~~~y~~~-------------~~~~~~p~~~p~~~~l~--~~lPp~~i~~g~~D~L~d--e~~~~~ 269 (318)
T PRK10162 207 GGVWDGLTQQDLQMYEEAYLSN-------------DADRESPYYCLFNNDLT--RDVPPCFIAGAEFDPLLD--DSRLLY 269 (318)
T ss_pred CCCccccCHHHHHHHHHHhCCC-------------ccccCCcccCcchhhhh--cCCCCeEEEecCCCcCcC--hHHHHH
Confidence 000 000000000000 00000000000000000 113699999999999864 455555
Q ss_pred hhC----CCcEEEEEcCCCcccccC------chHHHHHHHHHHHhhc
Q 022960 235 KFI----PNHKLHIIEGADHEFTSH------QDELASLVIQFIKANY 271 (289)
Q Consensus 235 ~~~----~~~~~~~~~~~gH~~~~~------~~~~~~~i~~fl~~~~ 271 (289)
+.+ ..++++.++|..|.+... ..+..+.+.+||.+.+
T Consensus 270 ~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 270 QTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred HHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 444 358999999999986421 2467788888998765
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.3e-19 Score=132.19 Aligned_cols=177 Identities=24% Similarity=0.309 Sum_probs=108.0
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHH-HHHHcCccEEEEcccc------CCC---CCC-----Cc----cccchHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAA-ALEREGISAFRFDFSG------NGE---SEG-----SF----LYGNYRREAEDL 104 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~-~l~~~G~~v~~~d~~G------~G~---s~~-----~~----~~~~~~~~~~d~ 104 (289)
..++||++||+|++.+. +..+.. .+......++.++-|. .|. +.- .. ....+...++.+
T Consensus 13 ~~~lvi~LHG~G~~~~~--~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDL--FALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp -SEEEEEE--TTS-HHH--HHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcch--hHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 67899999999998743 444443 1222346677765441 122 110 00 112233344556
Q ss_pred HHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccc
Q 022960 105 RAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKK 181 (289)
Q Consensus 105 ~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (289)
.++++...+. +.+++++.|+|.||.+|+.++.++|+ +.++|++++.+..........
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~-------------------- 150 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRP-------------------- 150 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCH--------------------
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccc--------------------
Confidence 6666655444 55689999999999999999999999 999999998654332111000
Q ss_pred cccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----CCcEEEEEcCCCcccccCch
Q 022960 182 GKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI----PNHKLHIIEGADHEFTSHQD 257 (289)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~ 257 (289)
.. .-++|++++||++|+++|.+.++...+.+ .+++++.+++.||.. ..
T Consensus 151 ------------------------~~-~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i---~~ 202 (216)
T PF02230_consen 151 ------------------------EA-LAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI---SP 202 (216)
T ss_dssp ------------------------CC-CCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----H
T ss_pred ------------------------cc-cCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC---CH
Confidence 00 01579999999999999998877766555 357999999999987 46
Q ss_pred HHHHHHHHHHHhh
Q 022960 258 ELASLVIQFIKAN 270 (289)
Q Consensus 258 ~~~~~i~~fl~~~ 270 (289)
+..+.+.+||+++
T Consensus 203 ~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 203 EELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh
Confidence 7788899999875
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.7e-19 Score=131.41 Aligned_cols=171 Identities=18% Similarity=0.153 Sum_probs=106.3
Q ss_pred CCcEEEEEcCCCCCCCCcchH---HHHHHHHHcCccEEEEccccCCCCCCCccc------cchHHHHHHHHHHHHHHHhc
Q 022960 44 SKQLVIVCHGFQSTKDRIPMV---NLAAALEREGISAFRFDFSGNGESEGSFLY------GNYRREAEDLRAIVQDFCAK 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~---~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~------~~~~~~~~d~~~~i~~l~~~ 114 (289)
+.|+||++||.+++... +. .+.+.+.+.||.|+++|++|++.+...... ........++..+++++.++
T Consensus 12 ~~P~vv~lHG~~~~~~~--~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 12 PRALVLALHGCGQTASA--YVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCEEEEeCCCCCCHHH--HhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 67899999999987654 32 245555567999999999998754321110 01123456777888887665
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccCh
Q 022960 115 ---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQ 190 (289)
Q Consensus 115 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (289)
+.++++|+|||+||.+++.++..+|+ +.+++.+++........... ....+ ......
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~----~~~~~---------------~~~~~~ 150 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSIS----ATPQM---------------CTAATA 150 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchh----hHhhc---------------CCCCCH
Confidence 44689999999999999999999999 89988888754322110000 00000 000000
Q ss_pred hhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC
Q 022960 191 ESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP 238 (289)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (289)
..+.+..... .. .......|++++||++|.+||++.++.+.+.+.
T Consensus 151 ~~~~~~~~~~-~~--~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 151 ASVCRLVRGM-QS--EYNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred HHHHHHHhcc-CC--cccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 1111111000 00 011124567899999999999999988877763
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=125.63 Aligned_cols=242 Identities=18% Similarity=0.154 Sum_probs=159.6
Q ss_pred cCccCCcccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCC
Q 022960 12 QGFQQDPVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGE 87 (289)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 87 (289)
......+.++.-+++|+..+|.+|.+|+.-|. ..|.||-.||+++... .|..+. .++..||.|+.+|.||.|.
T Consensus 46 ~~d~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g--~~~~~l-~wa~~Gyavf~MdvRGQg~ 122 (321)
T COG3458 46 RSDFTLPRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG--EWHDML-HWAVAGYAVFVMDVRGQGS 122 (321)
T ss_pred eccccCCceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC--Cccccc-cccccceeEEEEecccCCC
Confidence 33344556788899999999999999987653 5689999999999884 355544 3455699999999999998
Q ss_pred CCCC---------------------ccccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccE
Q 022960 88 SEGS---------------------FLYGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISI 143 (289)
Q Consensus 88 s~~~---------------------~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~ 143 (289)
|... ....-+.....|+..+++.+... +-++|.+.|.|.||.+++.+++..|.+++
T Consensus 123 ~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~ 202 (321)
T COG3458 123 SSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKA 202 (321)
T ss_pred ccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhc
Confidence 7320 01111233457777777777554 56799999999999999999999999999
Q ss_pred EEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhcc-chhhhhcccccCceEEEEEeCCC
Q 022960 144 VINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST-DIHAACHMICQDCRVLTIHGTKD 222 (289)
Q Consensus 144 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~g~~D 222 (289)
++++-|.+.-...............+.. +...-.. ........+.. +..... .++++|+|+..|-.|
T Consensus 203 ~~~~~Pfl~df~r~i~~~~~~~ydei~~--y~k~h~~--------~e~~v~~TL~yfD~~n~A--~RiK~pvL~svgL~D 270 (321)
T COG3458 203 VVADYPFLSDFPRAIELATEGPYDEIQT--YFKRHDP--------KEAEVFETLSYFDIVNLA--ARIKVPVLMSVGLMD 270 (321)
T ss_pred ccccccccccchhheeecccCcHHHHHH--HHHhcCc--------hHHHHHHHHhhhhhhhHH--HhhccceEEeecccC
Confidence 9999887654332222221111111110 0000000 01111111111 111111 256899999999999
Q ss_pred CccChhhHHHHHhhCCC-cEEEEEcCCCcccccCchHHHHHHHHHHHhh
Q 022960 223 KMVPAEDALEFDKFIPN-HKLHIIEGADHEFTSHQDELASLVIQFIKAN 270 (289)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 270 (289)
+++|+...-..++.++. +++.+++.-+|.-. +.-..+.+..|+...
T Consensus 271 ~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~--p~~~~~~~~~~l~~l 317 (321)
T COG3458 271 PVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG--PGFQSRQQVHFLKIL 317 (321)
T ss_pred CCCCChhhHHHhhcccCCceEEEeeccccccC--cchhHHHHHHHHHhh
Confidence 99999999999999875 67788887778743 223345566777654
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-17 Score=130.04 Aligned_cols=216 Identities=20% Similarity=0.246 Sum_probs=129.8
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEE
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAII 122 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~ 122 (289)
.|+++++||++++... |......+... .|+++.+|+||||.|. .. .......++++..+++.+ +..+++++
T Consensus 21 ~~~i~~~hg~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~---~~~~~~l~ 93 (282)
T COG0596 21 GPPLVLLHGFPGSSSV--WRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDAL---GLEKVVLV 93 (282)
T ss_pred CCeEEEeCCCCCchhh--hHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHh---CCCceEEE
Confidence 6699999999998865 55432333332 1899999999999997 11 122233377888888877 66679999
Q ss_pred EeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc-------ccc---c----c-----chhHhhhhhcC-cccccc--
Q 022960 123 GHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGI-------EGR---L----G-----LGYLQRIKQNG-FIDVRN-- 179 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~-------~~~---~----~-----~~~~~~~~~~~-~~~~~~-- 179 (289)
|||+||.+++.++.++|+ ++++|++++........ ... . . ........... ......
T Consensus 94 G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (282)
T COG0596 94 GHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAA 173 (282)
T ss_pred EecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccc
Confidence 999999999999999999 99999998754310000 000 0 0 00000000000 000000
Q ss_pred ---cccccc---cccChh---hh----hhhhccchh---hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEE
Q 022960 180 ---KKGKLE---YRVTQE---SL----MDRLSTDIH---AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKL 242 (289)
Q Consensus 180 ---~~~~~~---~~~~~~---~~----~~~~~~~~~---~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~ 242 (289)
...... ...... .. ......... .......+++|+++++|++|.+.|......+.+..++ .++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~ 253 (282)
T COG0596 174 RAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARL 253 (282)
T ss_pred hhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceE
Confidence 000000 000000 00 000000000 1112224579999999999977776666777788885 999
Q ss_pred EEEcCCCcccc-cCchHHHHHHHHHH
Q 022960 243 HIIEGADHEFT-SHQDELASLVIQFI 267 (289)
Q Consensus 243 ~~~~~~gH~~~-~~~~~~~~~i~~fl 267 (289)
..++++||..+ ++++.+.+.+.+|+
T Consensus 254 ~~~~~~gH~~~~~~p~~~~~~i~~~~ 279 (282)
T COG0596 254 VVIPGAGHFPHLEAPEAFAAALLAFL 279 (282)
T ss_pred EEeCCCCCcchhhcHHHHHHHHHHHH
Confidence 99999999976 55677777777744
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=141.98 Aligned_cols=128 Identities=19% Similarity=0.150 Sum_probs=102.4
Q ss_pred eeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCC--cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHH
Q 022960 27 IPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDR--IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREA 101 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~ 101 (289)
+++.||.+|++.++.|. +.|+||++||++..... .........|+++||.|+++|+||+|.|.+...... ...+
T Consensus 1 i~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~ 79 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEA 79 (550)
T ss_pred CcCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccc
Confidence 35679999998877653 56899999999976420 012235568889999999999999999998764443 5678
Q ss_pred HHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc
Q 022960 102 EDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR 155 (289)
Q Consensus 102 ~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~ 155 (289)
+|+.++++++..+ ...+++++|+|+||.+++.+|..+|. ++++|..++..+...
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 9999999999876 23589999999999999999999877 999999888766543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.4e-17 Score=117.91 Aligned_cols=225 Identities=18% Similarity=0.233 Sum_probs=128.9
Q ss_pred EEeeCCCCceEEEEEeecC-----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccC-CCCCCCccccchH
Q 022960 25 VVIPNSHGEKLVGILHETG-----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGN-GESEGSFLYGNYR 98 (289)
Q Consensus 25 ~~~~~~~g~~l~~~~~~~~-----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-G~s~~~~~~~~~~ 98 (289)
..+...+|.+++.|-..|. ..++||+.+|++..... +..++.+|+..||+|+.+|.-.| |.|++.....++.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh--~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms 82 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDH--FAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMS 82 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGG--GHHHHHHHHTTT--EEEE---B-------------HH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHH--HHHHHHHHhhCCeEEEeccccccccCCCCChhhcchH
Confidence 4455678889997766554 45899999999988865 89999999999999999999877 9999998888888
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCccccc
Q 022960 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVR 178 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (289)
...+++..+++|++..+..++.|+.-|+.|.+|+..++.- ++.-+|..-+..++...+.+.+...+....... ..
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i-~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~----lp 157 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI-NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQ----LP 157 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS---SEEEEES--S-HHHHHHHHHSS-GGGS-GGG------
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc-CcceEEEEeeeeeHHHHHHHHhccchhhcchhh----CC
Confidence 8899999999999988999999999999999999998843 688888888888776655555544444322111 11
Q ss_pred ccccccccccChhhhhh-hhccchh----hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC--CcEEEEEcCCCcc
Q 022960 179 NKKGKLEYRVTQESLMD-RLSTDIH----AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP--NHKLHIIEGADHE 251 (289)
Q Consensus 179 ~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~ 251 (289)
............+.+.. .+...+. .......+.+|++.+++++|.+|......++...+. .+++..++|++|.
T Consensus 158 ~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~Hd 237 (294)
T PF02273_consen 158 EDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHD 237 (294)
T ss_dssp SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-
T ss_pred CcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccch
Confidence 10011111122222211 1111111 111112458999999999999999999988888664 4789999999999
Q ss_pred cccCc
Q 022960 252 FTSHQ 256 (289)
Q Consensus 252 ~~~~~ 256 (289)
+-+.+
T Consensus 238 L~enl 242 (294)
T PF02273_consen 238 LGENL 242 (294)
T ss_dssp TTSSH
T ss_pred hhhCh
Confidence 76554
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.5e-17 Score=118.94 Aligned_cols=125 Identities=18% Similarity=0.269 Sum_probs=97.9
Q ss_pred ceeeEEeeCCCCceEE--EEEee--c-C-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-
Q 022960 21 QRRRVVIPNSHGEKLV--GILHE--T-G-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL- 93 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~--~~~~~--~-~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~- 93 (289)
....+.+...+|..+. ..|.. + | +..+||-+||.+|+..+ ++.+.+.|.+.|+++|.+++||+|.+.+...
T Consensus 5 ~~~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~D--FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~ 82 (297)
T PF06342_consen 5 VRKLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHND--FKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQ 82 (297)
T ss_pred EEEEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccc--hhhhhhHHHHcCeEEEEeCCCCCCCCCCCccc
Confidence 3455666666665544 33332 2 2 34589999999999976 8999999999999999999999999987653
Q ss_pred ccchHHHHHHHHHHHHHHHhcCC-ceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCC
Q 022960 94 YGNYRREAEDLRAIVQDFCAKGR-VITAIIGHSKGGNAVLLYASKYNDISIVINISGRF 151 (289)
Q Consensus 94 ~~~~~~~~~d~~~~i~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~ 151 (289)
.++..+...-+.++++.| ++ ++++.+|||.|+-.|+.++..+| +.++++++|+-
T Consensus 83 ~~~n~er~~~~~~ll~~l---~i~~~~i~~gHSrGcenal~la~~~~-~~g~~lin~~G 137 (297)
T PF06342_consen 83 QYTNEERQNFVNALLDEL---GIKGKLIFLGHSRGCENALQLAVTHP-LHGLVLINPPG 137 (297)
T ss_pred ccChHHHHHHHHHHHHHc---CCCCceEEEEeccchHHHHHHHhcCc-cceEEEecCCc
Confidence 445566677888888888 44 37899999999999999999996 56999998753
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.3e-17 Score=116.71 Aligned_cols=155 Identities=16% Similarity=0.135 Sum_probs=98.8
Q ss_pred EEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeChh
Q 022960 48 VIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKG 127 (289)
Q Consensus 48 iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~G 127 (289)
|+++||++++.....+..+.+.|.+. ++|-.+++ ...+++.+...+.+.+..+ .++++|||||+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~----------~~P~~~~W~~~l~~~i~~~----~~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW----------DNPDLDEWVQALDQAIDAI----DEPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC------------TS--HHHHHHHHHHCCHC-----TTTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc----------CCCCHHHHHHHHHHHHhhc----CCCeEEEEeCHH
Confidence 68999999998765566677777776 77776666 1224566666666665543 235999999999
Q ss_pred HHHHHHHH-HhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhh
Q 022960 128 GNAVLLYA-SKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAAC 205 (289)
Q Consensus 128 g~~a~~~a-~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (289)
+..++.++ ..... |+++++++|+.......... .. ..+.. .
T Consensus 66 c~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~----~~----------------------------~~f~~-----~ 108 (171)
T PF06821_consen 66 CLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPP----EL----------------------------DGFTP-----L 108 (171)
T ss_dssp HHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTC----GG----------------------------CCCTT-----S
T ss_pred HHHHHHHHhhcccccccEEEEEcCCCcccccchhh----hc----------------------------ccccc-----C
Confidence 99999999 44455 99999999974420000000 00 00000 0
Q ss_pred cccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccC
Q 022960 206 HMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSH 255 (289)
Q Consensus 206 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 255 (289)
....+.+|.+++.+++|+++|.+.++.+++.+ +++++.++++||+...+
T Consensus 109 p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 109 PRDPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred cccccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccccc
Confidence 00122567799999999999999999999998 89999999999996543
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=116.30 Aligned_cols=173 Identities=21% Similarity=0.289 Sum_probs=115.2
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEcccc--CCCC-------CCCccccchHHHHHHHHHHHHHHHhc
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSG--NGES-------EGSFLYGNYRREAEDLRAIVQDFCAK 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G--~G~s-------~~~~~~~~~~~~~~d~~~~i~~l~~~ 114 (289)
..|+||++||.|++..+ +.++.+.+..+ +.++.+.-+- .|.. .......+.......+.+.++.+.++
T Consensus 17 ~~~~iilLHG~Ggde~~--~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 17 AAPLLILLHGLGGDELD--LVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCcEEEEEecCCCChhh--hhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 56689999999988754 45555554443 5555442110 0100 01111122222234444444444433
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccCh
Q 022960 115 ---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQ 190 (289)
Q Consensus 115 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (289)
+.++++++|+|.||.+++.+..++|. ++++|+++|.+.........
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~~~------------------------------ 143 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELLPD------------------------------ 143 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccccc------------------------------
Confidence 44799999999999999999999999 99999999866543210000
Q ss_pred hhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcccccCchHHHHHHHHH
Q 022960 191 ESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEFTSHQDELASLVIQF 266 (289)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~i~~f 266 (289)
....|+++++|+.|+++|...+.++.+.+. +++...++ .||.. +.+..+.+.+|
T Consensus 144 ------------------~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i---~~e~~~~~~~w 201 (207)
T COG0400 144 ------------------LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEI---PPEELEAARSW 201 (207)
T ss_pred ------------------cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcC---CHHHHHHHHHH
Confidence 116799999999999999998888776663 47888888 79987 56677788889
Q ss_pred HHhhc
Q 022960 267 IKANY 271 (289)
Q Consensus 267 l~~~~ 271 (289)
+....
T Consensus 202 l~~~~ 206 (207)
T COG0400 202 LANTL 206 (207)
T ss_pred HHhcc
Confidence 87653
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-16 Score=113.23 Aligned_cols=183 Identities=19% Similarity=0.256 Sum_probs=114.7
Q ss_pred EEEEcCCCCCCCCcchHHHHHHHHHcC--ccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeC
Q 022960 48 VIVCHGFQSTKDRIPMVNLAAALEREG--ISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125 (289)
Q Consensus 48 iv~~hG~~~~~~~~~~~~~~~~l~~~G--~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S 125 (289)
|+++||+.++..+.-...+.+.+++.+ ..+.++|++- ......+.+.++++.. ..+.+.|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~-----------~p~~a~~~l~~~i~~~---~~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP-----------FPEEAIAQLEQLIEEL---KPENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc-----------CHHHHHHHHHHHHHhC---CCCCeEEEEEC
Confidence 799999999987744556777787765 4466666651 2344455666666554 44459999999
Q ss_pred hhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhh
Q 022960 126 KGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAAC 205 (289)
Q Consensus 126 ~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (289)
|||+.|..++.+++ +++ |+++|.+.....+...++....... ...+.+....+...-......
T Consensus 68 lGG~~A~~La~~~~-~~a-vLiNPav~p~~~l~~~iG~~~~~~~-------------~e~~~~~~~~~~~l~~l~~~~-- 130 (187)
T PF05728_consen 68 LGGFYATYLAERYG-LPA-VLINPAVRPYELLQDYIGEQTNPYT-------------GESYELTEEHIEELKALEVPY-- 130 (187)
T ss_pred hHHHHHHHHHHHhC-CCE-EEEcCCCCHHHHHHHhhCccccCCC-------------CccceechHhhhhcceEeccc--
Confidence 99999999998875 444 8889988766554443332211100 111111212111111101000
Q ss_pred cccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHH
Q 022960 206 HMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFI 267 (289)
Q Consensus 206 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl 267 (289)
..-..+++++.++.|++++.+.+. +.+.++..++.+|++|.+. +-++....|.+|+
T Consensus 131 --~~~~~~~lvll~~~DEvLd~~~a~---~~~~~~~~~i~~ggdH~f~-~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 131 --PTNPERYLVLLQTGDEVLDYREAV---AKYRGCAQIIEEGGDHSFQ-DFEEYLPQIIAFL 186 (187)
T ss_pred --cCCCccEEEEEecCCcccCHHHHH---HHhcCceEEEEeCCCCCCc-cHHHHHHHHHHhh
Confidence 122579999999999999985543 4445566667788899874 3467777888886
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.3e-16 Score=112.62 Aligned_cols=238 Identities=17% Similarity=0.138 Sum_probs=140.5
Q ss_pred EEeeCCCCceEEEEEeecC-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc---ccchHHH
Q 022960 25 VVIPNSHGEKLVGILHETG-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL---YGNYRRE 100 (289)
Q Consensus 25 ~~~~~~~g~~l~~~~~~~~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~~~~~ 100 (289)
..++..||..+.+..++.. +.+-.+++.|..+... .+|+.++..++++||.|+++|+||.|.|..... ...+.++
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 6688899999988777654 4443455555555544 479999999999999999999999999986543 2566666
Q ss_pred H-HHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccch----------hHhh
Q 022960 101 A-EDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLG----------YLQR 168 (289)
Q Consensus 101 ~-~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~----------~~~~ 168 (289)
+ .|+.++++.++.. ...+...||||+||.+.-.+. +++.+.+....+....+...+....... ....
T Consensus 87 A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~ 165 (281)
T COG4757 87 ARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTF 165 (281)
T ss_pred hhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCcccceeeEeccccccccchhhhhcccceeeccccccchhh
Confidence 5 7999999999764 344789999999998866543 3444333333332222211111100000 0000
Q ss_pred hhhcCcccccccccccccccChhhhhhhhc-----------cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC
Q 022960 169 IKQNGFIDVRNKKGKLEYRVTQESLMDRLS-----------TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI 237 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 237 (289)
+.. .+....--.+................ ....+... .+++|++++...+|+.+|+...+.+.+..
T Consensus 166 w~g-~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~ya--aVrtPi~~~~~~DD~w~P~As~d~f~~~y 242 (281)
T COG4757 166 WKG-YMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYA--AVRTPITFSRALDDPWAPPASRDAFASFY 242 (281)
T ss_pred ccc-cCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHH--HhcCceeeeccCCCCcCCHHHHHHHHHhh
Confidence 000 00000000000000000000000000 00111122 35899999999999999999999999999
Q ss_pred CCcEE--EEEcC----CCcc-cccCc-hHHHHHHHHHH
Q 022960 238 PNHKL--HIIEG----ADHE-FTSHQ-DELASLVIQFI 267 (289)
Q Consensus 238 ~~~~~--~~~~~----~gH~-~~~~~-~~~~~~i~~fl 267 (289)
+|+.+ ..++. -||+ .+.++ |.+.+++.+|+
T Consensus 243 ~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 243 RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 88644 44443 5898 44444 77888888776
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.70 E-value=3e-15 Score=115.25 Aligned_cols=222 Identities=17% Similarity=0.225 Sum_probs=137.5
Q ss_pred CCcEEEEEcCCCCCCCCcchHH-HHHHHHHcCccEEEEccccCCCCCCCcccc----ch-------HHHHHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVN-LAAALEREGISAFRFDFSGNGESEGSFLYG----NY-------RREAEDLRAIVQDF 111 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~-~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~----~~-------~~~~~d~~~~i~~l 111 (289)
.+|.+|.++|.|.+.-. .-.. ++..|.+.|+..+.+..|.||...+..... .. ...+.+...+++|+
T Consensus 91 ~rp~~IhLagTGDh~f~-rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFW-RRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCceEEEecCCCccchh-hhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999987521 1122 478888889999999999999776432211 11 23357888999999
Q ss_pred HhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcc---ccccc-ccccchhHh-hhhhcCccccccccccc-
Q 022960 112 CAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNL---KRGIE-GRLGLGYLQ-RIKQNGFIDVRNKKGKL- 184 (289)
Q Consensus 112 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~---~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~- 184 (289)
++++..++.+.|.||||.+|...+...|. +..+-++++.... ..... .......+. .+....+.+........
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~ 249 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQN 249 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccCc
Confidence 99999999999999999999999999998 6655555543221 11111 111111111 11111111110000000
Q ss_pred ---------ccccChhhhhhhhcc--chhhhhccc---ccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCc
Q 022960 185 ---------EYRVTQESLMDRLST--DIHAACHMI---CQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH 250 (289)
Q Consensus 185 ---------~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 250 (289)
......+... .... +........ .-.-.+.++.+++|..||......+.+.+|++++.++++ ||
T Consensus 250 ~~~~~~~~~~~~~~~Ea~~-~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GH 327 (348)
T PF09752_consen 250 KSLPLDSMEERRRDREALR-FMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GH 327 (348)
T ss_pred ccccchhhccccchHHHHH-HHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-Cc
Confidence 0000111111 1000 000001111 113358899999999999999999999999999999997 99
Q ss_pred c--cccCchHHHHHHHHHHH
Q 022960 251 E--FTSHQDELASLVIQFIK 268 (289)
Q Consensus 251 ~--~~~~~~~~~~~i~~fl~ 268 (289)
. ++.+.+.+.+.|.+-++
T Consensus 328 VsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 328 VSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred EEEeeechHHHHHHHHHHhh
Confidence 8 55777888888887664
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-15 Score=115.10 Aligned_cols=235 Identities=19% Similarity=0.234 Sum_probs=135.8
Q ss_pred CceEEEEEeec---CCCcEEEEEcCCCCCCCC---------cchHHHH---HHHHHcCccEEEEccccCC-CCCCCc---
Q 022960 32 GEKLVGILHET---GSKQLVIVCHGFQSTKDR---------IPMVNLA---AALEREGISAFRFDFSGNG-ESEGSF--- 92 (289)
Q Consensus 32 g~~l~~~~~~~---~~~~~iv~~hG~~~~~~~---------~~~~~~~---~~l~~~G~~v~~~d~~G~G-~s~~~~--- 92 (289)
+..+.|..++. ....+|+++|++.++... .+|..+. +.+.-..|.||++|..|.+ .|+++.
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 34555554442 246799999999986543 1344433 1233334899999999876 343322
Q ss_pred ----------cccchHHHHHHHHHHHHHHHhcCCceEE-EEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc--
Q 022960 93 ----------LYGNYRREAEDLRAIVQDFCAKGRVITA-IIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE-- 158 (289)
Q Consensus 93 ----------~~~~~~~~~~d~~~~i~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~-- 158 (289)
...++.+++.--..+++.| +++++. +||-||||+.|+.++..+|+ |..+|.+++.........
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~L---GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~ 191 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDAL---GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAF 191 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhc---CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHH
Confidence 1223344444445555666 999985 99999999999999999999 999888887443221000
Q ss_pred -c-----------c------------ccchhHhhhhh----------cCccccccccccc--ccccChhhhhh-------
Q 022960 159 -G-----------R------------LGLGYLQRIKQ----------NGFIDVRNKKGKL--EYRVTQESLMD------- 195 (289)
Q Consensus 159 -~-----------~------------~~~~~~~~~~~----------~~~~~~~~~~~~~--~~~~~~~~~~~------- 195 (289)
. + -+-...+.+.. ..|.......... ...+..+++.+
T Consensus 192 ~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~ 271 (368)
T COG2021 192 NEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFV 271 (368)
T ss_pred HHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHH
Confidence 0 0 00000000000 0000000000000 00111111111
Q ss_pred -hhccchh-------------hh-----hcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcE-EEEEc-CCCcc-cc
Q 022960 196 -RLSTDIH-------------AA-----CHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHK-LHIIE-GADHE-FT 253 (289)
Q Consensus 196 -~~~~~~~-------------~~-----~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~-~~gH~-~~ 253 (289)
.+..+.. .. ....++++|+|++.-+.|.+.|++..+++.+.++.+. ++.++ ..||. |+
T Consensus 272 ~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL 351 (368)
T COG2021 272 ARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFL 351 (368)
T ss_pred hccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhh
Confidence 1110000 00 0012468999999999999999999999999998766 65654 47998 56
Q ss_pred cCchHHHHHHHHHHHh
Q 022960 254 SHQDELASLVIQFIKA 269 (289)
Q Consensus 254 ~~~~~~~~~i~~fl~~ 269 (289)
.+.+.+...|..||+.
T Consensus 352 ~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 352 VESEAVGPLIRKFLAL 367 (368)
T ss_pred cchhhhhHHHHHHhhc
Confidence 7777888999999864
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.1e-16 Score=119.51 Aligned_cols=123 Identities=19% Similarity=0.194 Sum_probs=91.6
Q ss_pred CCceEEEEEeec--C---CCcEEEEEcCCCCCCCCcchHH---------HHHHHHHcCccEEEEccccCCCCCCCccccc
Q 022960 31 HGEKLVGILHET--G---SKQLVIVCHGFQSTKDRIPMVN---------LAAALEREGISAFRFDFSGNGESEGSFLYGN 96 (289)
Q Consensus 31 ~g~~l~~~~~~~--~---~~~~iv~~hG~~~~~~~~~~~~---------~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 96 (289)
||++|.+.++.| . +.|+||..|+++..... .... ....++++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~-~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQT-ASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-H-HHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCc-ccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 788999988877 2 56899999999965311 0111 112389999999999999999999887554
Q ss_pred hHHHHHHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc
Q 022960 97 YRREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR 155 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~ 155 (289)
.....+|..++|+++..+. ..+|.++|.|++|..++.+|+..|. +++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 5778899999999998883 3489999999999999999996666 999999988777654
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=114.91 Aligned_cols=222 Identities=20% Similarity=0.208 Sum_probs=89.7
Q ss_pred CCcEEEEEcCCCCCCCC-cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-----CCc
Q 022960 44 SKQLVIVCHGFQSTKDR-IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-----GRV 117 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-----~~~ 117 (289)
....||||.|++..... .+...+++.|.+.||.|+-+.++... .-....+++..++|+.+++++|+.. +.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy---~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~ 108 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSY---SGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGRE 108 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGB---TTS-S--HHHHHHHHHHHHHHHHHHS------S
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCcc---CCcCcchhhhHHHHHHHHHHHHHHhhccccCCc
Confidence 56689999999875443 46788999998789999999876311 1122346788899999999999888 467
Q ss_pred eEEEEEeChhHHHHHHHHHhCC-----C-ccEEEEeccCCccccccccccc----ch---hHhhhhhcCcc-cccc-ccc
Q 022960 118 ITAIIGHSKGGNAVLLYASKYN-----D-ISIVINISGRFNLKRGIEGRLG----LG---YLQRIKQNGFI-DVRN-KKG 182 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~~p-----~-v~~~v~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~-~~~~-~~~ 182 (289)
+|+|+|||.|+.-++.|+.... . |+++|+-+|..+........-. .. ..+.+...+-. .... ...
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~ 188 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPREFT 188 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG----G
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeecccc
Confidence 9999999999999999988752 2 9999999997765432221111 11 11111111111 1100 000
Q ss_pred cc---ccccChhhhhh---------hhccchhhh---hcccccCceEEEEEeCCCCccChhhH-HHHHhhCCC-------
Q 022960 183 KL---EYRVTQESLMD---------RLSTDIHAA---CHMICQDCRVLTIHGTKDKMVPAEDA-LEFDKFIPN------- 239 (289)
Q Consensus 183 ~~---~~~~~~~~~~~---------~~~~~~~~~---~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~------- 239 (289)
.. ...++...+.. .+..+.... ...-++.+|+|++.+++|+.+|...- +.+.+++..
T Consensus 189 ~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~ 268 (303)
T PF08538_consen 189 PLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIW 268 (303)
T ss_dssp GTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT------------------------
T ss_pred ccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccccccc
Confidence 00 11222222221 111111111 11114578999999999999987542 334444432
Q ss_pred -cEEEEEcCCCcccccCc-----hHHHHHHHHHHH
Q 022960 240 -HKLHIIEGADHEFTSHQ-----DELASLVIQFIK 268 (289)
Q Consensus 240 -~~~~~~~~~gH~~~~~~-----~~~~~~i~~fl~ 268 (289)
..-.++||++|.+-... +++.+.+..||+
T Consensus 269 s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 269 SPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -----------------------------------
T ss_pred cccccccccccccccccccccccccccccccccCC
Confidence 23458999999975322 357777888774
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.69 E-value=5e-15 Score=118.22 Aligned_cols=218 Identities=15% Similarity=0.168 Sum_probs=136.3
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeC
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S 125 (289)
|+||++..+.++... +.+.+.+.|.. |+.|+.+|+.--+..+......+++++++.+.++++++ +.+ ++++|+|
T Consensus 103 ~pvLiV~Pl~g~~~~-L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~---G~~-v~l~GvC 176 (406)
T TIGR01849 103 PAVLIVAPMSGHYAT-LLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL---GPD-IHVIAVC 176 (406)
T ss_pred CcEEEEcCCchHHHH-HHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh---CCC-CcEEEEc
Confidence 799999998876543 45778888888 99999999987775543344557788887888888777 666 9999999
Q ss_pred hhHHHHHHHHHhC-----CC-ccEEEEeccCCccccc--ccccc-c---chhHhhhh-h--------------------c
Q 022960 126 KGGNAVLLYASKY-----ND-ISIVINISGRFNLKRG--IEGRL-G---LGYLQRIK-Q--------------------N 172 (289)
Q Consensus 126 ~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~~~~~~--~~~~~-~---~~~~~~~~-~--------------------~ 172 (289)
+||..++.+++.. |. ++++++++++.+.... ....+ . -.+..... . .
T Consensus 177 qgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~ 256 (406)
T TIGR01849 177 QPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLA 256 (406)
T ss_pred hhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHH
Confidence 9999977766654 55 9999999998886532 11110 0 00111000 0 0
Q ss_pred Ccccccccc--------------cccc---------------cccChhhhhhhhccchhhh-------------hccccc
Q 022960 173 GFIDVRNKK--------------GKLE---------------YRVTQESLMDRLSTDIHAA-------------CHMICQ 210 (289)
Q Consensus 173 ~~~~~~~~~--------------~~~~---------------~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 210 (289)
.|....... +... .....+.+.+.+..-+... ....+|
T Consensus 257 ~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I 336 (406)
T TIGR01849 257 GFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAI 336 (406)
T ss_pred HHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHC
Confidence 000000000 0000 0000001111110000000 001156
Q ss_pred C-ceEEEEEeCCCCccChhhHHHHHhhC---C--CcEEEEEcCCCccc-cc---CchHHHHHHHHHHHh
Q 022960 211 D-CRVLTIHGTKDKMVPAEDALEFDKFI---P--NHKLHIIEGADHEF-TS---HQDELASLVIQFIKA 269 (289)
Q Consensus 211 ~-~P~l~i~g~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~~gH~~-~~---~~~~~~~~i~~fl~~ 269 (289)
+ +|+|.+.|++|.++|+.+++.+.+.+ + +.+.+..+++||.- +. -.+++...|.+||.+
T Consensus 337 ~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 337 TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 7 99999999999999999999999885 4 34677777899993 32 236789999999975
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.6e-15 Score=122.54 Aligned_cols=106 Identities=8% Similarity=0.071 Sum_probs=85.9
Q ss_pred CCcEEEEEcCCCCCCCCcch-----HHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCc
Q 022960 44 SKQLVIVCHGFQSTKDRIPM-----VNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRV 117 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~ 117 (289)
.+.+||+++++.... +.+ +.+++.|.++|+.|+.+|+++-+.... ..+++++++.+.++++.+++. +.+
T Consensus 214 ~~~PLLIVPp~INK~--YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r---~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 214 HARPLLVVPPQINKF--YIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR---EWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCCcEEEechhhhhh--heeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc---CCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 457899999987443 223 679999999999999999998665542 346677778899999998777 677
Q ss_pred eEEEEEeChhHHHHHH----HHHhCCC--ccEEEEeccCCccc
Q 022960 118 ITAIIGHSKGGNAVLL----YASKYND--ISIVINISGRFNLK 154 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~----~a~~~p~--v~~~v~~~~~~~~~ 154 (289)
++.++|+|+||.+++. +++++++ |++++++.++.++.
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 8999999999999987 7777774 99999999888765
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.6e-15 Score=106.99 Aligned_cols=186 Identities=17% Similarity=0.203 Sum_probs=133.1
Q ss_pred EEEEEeecC-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccc-cCCCCCCCc--------cccchHHHHHHH
Q 022960 35 LVGILHETG-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFS-GNGESEGSF--------LYGNYRREAEDL 104 (289)
Q Consensus 35 l~~~~~~~~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~-G~G~s~~~~--------~~~~~~~~~~d~ 104 (289)
+..|+.+.. ++..||++--..|.... -.+..++.++..||.|+++|+- |--.+.... ...+.+....++
T Consensus 28 ldaYv~gs~~~~~~li~i~DvfG~~~~-n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i 106 (242)
T KOG3043|consen 28 LDAYVVGSTSSKKVLIVIQDVFGFQFP-NTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDI 106 (242)
T ss_pred eeEEEecCCCCCeEEEEEEeeeccccH-HHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHH
Confidence 445555554 33466666665554421 2678999999999999999975 422222100 112233445899
Q ss_pred HHHHHHHHhcC-CceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccc
Q 022960 105 RAIVQDFCAKG-RVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGK 183 (289)
Q Consensus 105 ~~~i~~l~~~~-~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (289)
..++++|+.++ ..+|.++|++|||.++..+....|++.+++.+-|.+.-....
T Consensus 107 ~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d~~D~-------------------------- 160 (242)
T KOG3043|consen 107 TAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVDSADI-------------------------- 160 (242)
T ss_pred HHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchhheeeeEecCCcCChhHH--------------------------
Confidence 99999999885 778999999999999999998888888888877643211100
Q ss_pred cccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-----cEEEEEcCCCccccc----
Q 022960 184 LEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-----HKLHIIEGADHEFTS---- 254 (289)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~---- 254 (289)
..+++|+|++.|+.|+++|++....+.+.+.+ .++.+++|.+|.++.
T Consensus 161 ------------------------~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~ 216 (242)
T KOG3043|consen 161 ------------------------ANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRAN 216 (242)
T ss_pred ------------------------hcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccC
Confidence 13489999999999999999998888877743 479999999999762
Q ss_pred --Cc------hHHHHHHHHHHHhhc
Q 022960 255 --HQ------DELASLVIQFIKANY 271 (289)
Q Consensus 255 --~~------~~~~~~i~~fl~~~~ 271 (289)
.| ++..+.+..|+++++
T Consensus 217 ~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 217 ISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhh
Confidence 12 356778888888765
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.6e-15 Score=122.34 Aligned_cols=108 Identities=16% Similarity=0.117 Sum_probs=82.5
Q ss_pred CCcEEEEEcCCCCCCCCcchH-HHHHHHHHc--CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc---CCc
Q 022960 44 SKQLVIVCHGFQSTKDRIPMV-NLAAALERE--GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK---GRV 117 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~-~~~~~l~~~--G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~ 117 (289)
++|++|++||++++.....|. .+.+.|... .++|+++|++|+|.+............++++.+++++|.+. +.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 578999999998764211244 355555432 59999999999998765433333355678888889888543 567
Q ss_pred eEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 118 ITAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
+++||||||||.+|..++...|. |.++++++|..
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 99999999999999999998888 99999999853
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.9e-15 Score=110.90 Aligned_cols=235 Identities=14% Similarity=0.176 Sum_probs=129.3
Q ss_pred EeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchH-----HHHHHHHHcCccEEEEccccCCCCCCCc----cc
Q 022960 26 VIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMV-----NLAAALEREGISAFRFDFSGNGESEGSF----LY 94 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~-----~~~~~l~~~G~~v~~~d~~G~G~s~~~~----~~ 94 (289)
.+++.-| .+...+++.. ++|+||-.|-.|-+..+ -+. .-.+.+.++ +.++-+|.||+....... .+
T Consensus 3 ~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~s-cF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 3 DVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKS-CFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp EEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHH-HCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT---
T ss_pred eeccCce-EEEEEEEecCCCCCceEEEeccccccchH-HHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccc
Confidence 3444445 5676677654 59999999999987653 122 233455554 999999999997654332 35
Q ss_pred cchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhH-hhhhhc
Q 022960 95 GNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYL-QRIKQN 172 (289)
Q Consensus 95 ~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 172 (289)
.+.++.++++.++++++ +++.++.+|--.||++..++|..+|+ |.++|++++......++ ++...++. ..+...
T Consensus 80 Psmd~LAe~l~~Vl~~f---~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~-Ew~~~K~~~~~L~~~ 155 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHF---GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWM-EWFYQKLSSWLLYSY 155 (283)
T ss_dssp --HHHHHCTHHHHHHHH---T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HH-HHHHHHHH-------
T ss_pred cCHHHHHHHHHHHHHhC---CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHH-HHHHHHHhccccccc
Confidence 57789999999999999 88899999999999999999999999 99999999865443222 11111111 011111
Q ss_pred C-------------cccccccccccc---------cccChhhhhhhhc---cchhhhhcccccCceEEEEEeCCCCccCh
Q 022960 173 G-------------FIDVRNKKGKLE---------YRVTQESLMDRLS---TDIHAACHMICQDCRVLTIHGTKDKMVPA 227 (289)
Q Consensus 173 ~-------------~~~~~~~~~~~~---------~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 227 (289)
+ |........... ....+..+...+. .............||+|++.|+..+..
T Consensus 156 gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~-- 233 (283)
T PF03096_consen 156 GMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV-- 233 (283)
T ss_dssp CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--
T ss_pred ccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--
Confidence 1 100000000000 0011111111111 000001111134799999999999864
Q ss_pred hhHHHHHhhCC--CcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 228 EDALEFDKFIP--NHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 228 ~~~~~~~~~~~--~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+.+.++..++. +.++..++++|=.+. +.|.++++.+.-||+.
T Consensus 234 ~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 234 DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 66667777773 478999999988866 6678899999999875
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-15 Score=113.35 Aligned_cols=99 Identities=22% Similarity=0.192 Sum_probs=73.0
Q ss_pred EEEEcCCCCCCCC-cchHHHHHHHHH-cCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc------CCceE
Q 022960 48 VIVCHGFQSTKDR-IPMVNLAAALER-EGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK------GRVIT 119 (289)
Q Consensus 48 iv~~hG~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~------~~~~~ 119 (289)
||++||++..... .....++..+++ .|+.|+.+|+|= .....+.+..+|+.++++++.++ +.+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl-------~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRL-------APEAPFPAALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE----------TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccc-------cccccccccccccccceeeeccccccccccccce
Confidence 7999998865332 224556667765 799999999993 23346678889999999998775 46699
Q ss_pred EEEEeChhHHHHHHHHHhC-----CCccEEEEeccCCcc
Q 022960 120 AIIGHSKGGNAVLLYASKY-----NDISIVINISGRFNL 153 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~-----p~v~~~v~~~~~~~~ 153 (289)
+|+|+|.||.+++.++... +.++++++++|..+.
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999998753 228999999997765
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.4e-14 Score=107.17 Aligned_cols=203 Identities=23% Similarity=0.393 Sum_probs=126.2
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHH-HcCcc--EEE--EccccC----CCCC----CC-------ccc-cchHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALE-REGIS--AFR--FDFSGN----GESE----GS-------FLY-GNYRREAE 102 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~-~~G~~--v~~--~d~~G~----G~s~----~~-------~~~-~~~~~~~~ 102 (289)
...|.||+||++++..+ +..++..+. +.|.. ++. ++--|+ |.-. .+ ... .++...+.
T Consensus 10 ~~tPTifihG~~gt~~s--~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANS--FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--TTGGCCC--CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCCCCChhH--HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 45689999999999876 899999997 66543 333 333332 2111 11 112 36778899
Q ss_pred HHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC------CCccEEEEeccCCcccccccccccchhHhhhhhcCcc
Q 022960 103 DLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY------NDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFI 175 (289)
Q Consensus 103 d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~------p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (289)
.+..++.+|+++ +++++.+|||||||..++.++..+ |.+..+|.++++++.......... ...+.
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~---~~~~~----- 159 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN---QNDLN----- 159 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT---TT-CS-----
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccch---hhhhc-----
Confidence 999999999888 899999999999999999998874 458999999998875432211100 00000
Q ss_pred cccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeC------CCCccChhhHHHHHhhCCC----cEEEEE
Q 022960 176 DVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGT------KDKMVPAEDALEFDKFIPN----HKLHII 245 (289)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~----~~~~~~ 245 (289)
..+ .....+.+...+.. . ...++..+.+|-|.|. .|..||...+..+...+.+ .+-..+
T Consensus 160 ----~~g---p~~~~~~y~~l~~~-~---~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v 228 (255)
T PF06028_consen 160 ----KNG---PKSMTPMYQDLLKN-R---RKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTV 228 (255)
T ss_dssp ----TT----BSS--HHHHHHHHT-H---GGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEE
T ss_pred ----ccC---CcccCHHHHHHHHH-H---HhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEE
Confidence 000 00011111111111 0 1222347899999999 8999999999888887754 355556
Q ss_pred cC--CCcccccCchHHHHHHHHHH
Q 022960 246 EG--ADHEFTSHQDELASLVIQFI 267 (289)
Q Consensus 246 ~~--~gH~~~~~~~~~~~~i~~fl 267 (289)
.| +.|.-+.+.+++.+.|.+||
T Consensus 229 ~G~~a~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 229 TGKDAQHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp ESGGGSCCGGGCCHHHHHHHHHHH
T ss_pred ECCCCccccCCCCHHHHHHHHHHh
Confidence 54 68996667789999999998
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-14 Score=125.59 Aligned_cols=206 Identities=14% Similarity=0.144 Sum_probs=127.5
Q ss_pred HHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-----------------CCceEEEEEeChh
Q 022960 65 NLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-----------------GRVITAIIGHSKG 127 (289)
Q Consensus 65 ~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-----------------~~~~~~l~G~S~G 127 (289)
.+.++|+.+||.|+..|.||.|.|.+...... ....+|..++|+|+..+ ...+|.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 46688999999999999999999998765433 56678999999999743 1459999999999
Q ss_pred HHHHHHHHHhCCC-ccEEEEeccCCccccccccc--c-------c--chhHhhhhhcCcccccc-cccccccccChhhhh
Q 022960 128 GNAVLLYASKYND-ISIVINISGRFNLKRGIEGR--L-------G--LGYLQRIKQNGFIDVRN-KKGKLEYRVTQESLM 194 (289)
Q Consensus 128 g~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~--~-------~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 194 (289)
|.+++.+|...|. ++++|..++..++....... + . ................. ......+......+.
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 428 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELT 428 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhh
Confidence 9999999988877 99999988765433211100 0 0 00000000000000000 000000000000000
Q ss_pred h-----------hhc-cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCccccc--Cc
Q 022960 195 D-----------RLS-TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEFTS--HQ 256 (289)
Q Consensus 195 ~-----------~~~-~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~--~~ 256 (289)
. .+. .+..... .++++|+|+++|..|..++++.+.++++.+. ..++.+.+ .+|.... ..
T Consensus 429 ~~~~~~~~~y~~fW~~rn~~~~~--~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~ 505 (767)
T PRK05371 429 AAQDRKTGDYNDFWDDRNYLKDA--DKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQS 505 (767)
T ss_pred hhhhhcCCCccHHHHhCCHhhHh--hCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhH
Confidence 0 000 0111111 2568999999999999999888877776653 35665555 5787432 34
Q ss_pred hHHHHHHHHHHHhhcCCC
Q 022960 257 DELASLVIQFIKANYQKD 274 (289)
Q Consensus 257 ~~~~~~i~~fl~~~~~~~ 274 (289)
.++.+.+.+|++.++...
T Consensus 506 ~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 506 IDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred HHHHHHHHHHHHhccccC
Confidence 578899999999988653
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-15 Score=116.92 Aligned_cols=109 Identities=16% Similarity=0.199 Sum_probs=81.4
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHH-HcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc---CCceE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALE-REGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK---GRVIT 119 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~ 119 (289)
++|++|++||++++....+...+.+.+. ..+++|+++|+++++.+.......+.....+++..+++.+.+. +.+++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i 114 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENV 114 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHE
Confidence 5789999999999873222344555454 4579999999998743322112223455567888888888664 45789
Q ss_pred EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 120 AIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
+++||||||.+|..++...|+ |+++++++|...
T Consensus 115 ~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred EEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 999999999999999999988 999999987643
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.3e-15 Score=114.28 Aligned_cols=134 Identities=18% Similarity=0.143 Sum_probs=86.8
Q ss_pred CCcccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCC-------------c---chHHHHHHHHHcCc
Q 022960 16 QDPVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDR-------------I---PMVNLAAALEREGI 75 (289)
Q Consensus 16 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~-------------~---~~~~~~~~l~~~G~ 75 (289)
...+...+.+.|.+.++..+..++..|. +.|+||++||-++..+. . .-..+...|+++||
T Consensus 82 qrdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GY 161 (390)
T PF12715_consen 82 QRDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGY 161 (390)
T ss_dssp EETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTS
T ss_pred ecCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCC
Confidence 3456788899999999999988876554 56799999997765421 0 01346889999999
Q ss_pred cEEEEccccCCCCCCCcc-----ccchHH---------------HHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHH
Q 022960 76 SAFRFDFSGNGESEGSFL-----YGNYRR---------------EAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVL 132 (289)
Q Consensus 76 ~v~~~d~~G~G~s~~~~~-----~~~~~~---------------~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~ 132 (289)
.|+++|.+|+|+...... ..++.. .+.|...++++|... +.++|.++|+||||..++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHH
Confidence 999999999998764321 111111 124555688888776 567999999999999999
Q ss_pred HHHHhCCCccEEEEecc
Q 022960 133 LYASKYNDISIVINISG 149 (289)
Q Consensus 133 ~~a~~~p~v~~~v~~~~ 149 (289)
.+++..++|++.|..+-
T Consensus 242 ~LaALDdRIka~v~~~~ 258 (390)
T PF12715_consen 242 WLAALDDRIKATVANGY 258 (390)
T ss_dssp HHHHH-TT--EEEEES-
T ss_pred HHHHcchhhHhHhhhhh
Confidence 99999999988886654
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.7e-14 Score=113.80 Aligned_cols=135 Identities=19% Similarity=0.203 Sum_probs=106.4
Q ss_pred CcccceeeEEeeCCCCceEEEEEee--cCCCcEEEEEcCCCCCCCCcch----HHHHHHHHHcCccEEEEccccCCCCCC
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHE--TGSKQLVIVCHGFQSTKDRIPM----VNLAAALEREGISAFRFDFSGNGESEG 90 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~--~~~~~~iv~~hG~~~~~~~~~~----~~~~~~l~~~G~~v~~~d~~G~G~s~~ 90 (289)
..+.+.++..+.+.||..+.....+ .+++|+|++.||+.+++..|.. ..++-.|+++||.|..-+.||--.|.+
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~ 122 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRK 122 (403)
T ss_pred HcCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchh
Confidence 3457788999999999876654332 2688999999999998876422 346677899999999999999766542
Q ss_pred C----------ccccchHHHH-HHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC----ccEEEEeccCC
Q 022960 91 S----------FLYGNYRREA-EDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND----ISIVINISGRF 151 (289)
Q Consensus 91 ~----------~~~~~~~~~~-~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~ 151 (289)
. +-..++.+++ .|+.+.|+++.+. +.++++.+|||.|+.....++...|+ |+.+++++|..
T Consensus 123 h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 123 HKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 1 2234556644 7999999999776 67899999999999999998888865 89999999866
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.8e-15 Score=112.19 Aligned_cols=211 Identities=14% Similarity=0.161 Sum_probs=122.7
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeC
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S 125 (289)
++|+++|+.+++.. .|..+++.|...++.|+.++++|.+ .......++++++++..+.|...... .++.|+|||
T Consensus 1 ~~lf~~p~~gG~~~--~y~~la~~l~~~~~~v~~i~~~~~~--~~~~~~~si~~la~~y~~~I~~~~~~--gp~~L~G~S 74 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS--SYRPLARALPDDVIGVYGIEYPGRG--DDEPPPDSIEELASRYAEAIRARQPE--GPYVLAGWS 74 (229)
T ss_dssp -EEEEESSTTCSGG--GGHHHHHHHTTTEEEEEEECSTTSC--TTSHEESSHHHHHHHHHHHHHHHTSS--SSEEEEEET
T ss_pred CeEEEEcCCccCHH--HHHHHHHhCCCCeEEEEEEecCCCC--CCCCCCCCHHHHHHHHHHHhhhhCCC--CCeeehccC
Confidence 47999999999884 5999999998744889999999988 33334567788887777777655322 289999999
Q ss_pred hhHHHHHHHHHhC---CC-ccEEEEeccCCcccccccc--cccch-hHhhhhhcCcccccccccccccccChhhhhhhhc
Q 022960 126 KGGNAVLLYASKY---ND-ISIVINISGRFNLKRGIEG--RLGLG-YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLS 198 (289)
Q Consensus 126 ~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (289)
+||.+|..+|.+. .. +..+++++++......... ..... +...+............. ......+.+.+.
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 150 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLED----EELLARLLRALR 150 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHH----HHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcC----HHHHHHHHHHHH
Confidence 9999999999764 23 8999999965443211111 11000 111111111000000000 000001111111
Q ss_pred cchhhhhc--cccc---CceEEEEEeCCCCccChh---hHHHHHhhCCC-cEEEEEcCCCcccccC--chHHHHHHHHHH
Q 022960 199 TDIHAACH--MICQ---DCRVLTIHGTKDKMVPAE---DALEFDKFIPN-HKLHIIEGADHEFTSH--QDELASLVIQFI 267 (289)
Q Consensus 199 ~~~~~~~~--~~~~---~~P~l~i~g~~D~~~~~~---~~~~~~~~~~~-~~~~~~~~~gH~~~~~--~~~~~~~i~~fl 267 (289)
........ .... .+|.++.....|+..... ....+.+..++ .+++.++| +|+.+.. ..++++.|.+||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 151 DDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp HHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETTGHHSTTHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCcEecchHHHHHHHHHhccC
Confidence 11100000 0011 457888899999887665 23336666654 57888885 8996643 356777776665
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.7e-14 Score=109.33 Aligned_cols=238 Identities=17% Similarity=0.107 Sum_probs=131.4
Q ss_pred cceeeEEeeCCCCceEEEEEeecC------CCcEEEEEcCCCCCC---CCcchHHHHHHHHHc-CccEEEEccccCCCCC
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG------SKQLVIVCHGFQSTK---DRIPMVNLAAALERE-GISAFRFDFSGNGESE 89 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~---~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~ 89 (289)
+...++.+....+ +..+++.|. ..|.||++||+|..- ....|..+...++.. +..|+.+|||=
T Consensus 61 v~~~dv~~~~~~~--l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL----- 133 (336)
T KOG1515|consen 61 VTSKDVTIDPFTN--LPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL----- 133 (336)
T ss_pred ceeeeeEecCCCC--eEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc-----
Confidence 4445555555444 444455443 568999999988533 234577888888654 88899999992
Q ss_pred CCccccchHHHHHHHHHHHHHHHhc-------CCceEEEEEeChhHHHHHHHHHhC-------CCccEEEEeccCCcccc
Q 022960 90 GSFLYGNYRREAEDLRAIVQDFCAK-------GRVITAIIGHSKGGNAVLLYASKY-------NDISIVINISGRFNLKR 155 (289)
Q Consensus 90 ~~~~~~~~~~~~~d~~~~i~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~-------p~v~~~v~~~~~~~~~~ 155 (289)
.....+....+|..+++.|+.++ +.++++|+|-|.||.+|..++.+. +.+++.|++.|.+....
T Consensus 134 --APEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 134 --APEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred --CCCCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 22233344455666666665443 778999999999999998887653 22999999999876543
Q ss_pred ccccccc-----chhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChh--
Q 022960 156 GIEGRLG-----LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAE-- 228 (289)
Q Consensus 156 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-- 228 (289)
....... ...........+.......... . ....+.............. .--.|+|++.++.|.+....
T Consensus 212 ~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~--~-~~~p~~np~~~~~~~d~~~-~~lp~tlv~~ag~D~L~D~~~~ 287 (336)
T KOG1515|consen 212 RTESEKQQNLNGSPELARPKIDKWWRLLLPNGKT--D-LDHPFINPVGNSLAKDLSG-LGLPPTLVVVAGYDVLRDEGLA 287 (336)
T ss_pred CCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCC--C-cCCccccccccccccCccc-cCCCceEEEEeCchhhhhhhHH
Confidence 3322110 0000000000000000000000 0 0000000000000000001 11245999999999886322
Q ss_pred hHHHHHhhCCCcEEEEEcCCCcccc-cC-----chHHHHHHHHHHHhh
Q 022960 229 DALEFDKFIPNHKLHIIEGADHEFT-SH-----QDELASLVIQFIKAN 270 (289)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~gH~~~-~~-----~~~~~~~i~~fl~~~ 270 (289)
.++++.+.--.+++..++++.|.++ .. ..++.+.+.+|+++.
T Consensus 288 Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 288 YAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 2334433333467778999999964 22 236778888888753
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-13 Score=101.12 Aligned_cols=241 Identities=15% Similarity=0.131 Sum_probs=152.8
Q ss_pred eeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCC----cchHHHHHHHHHcCccEEEEccccCCCCCCCc---
Q 022960 22 RRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDR----IPMVNLAAALEREGISAFRFDFSGNGESEGSF--- 92 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~----~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--- 92 (289)
.++..+.+.-| .++..+++.. ++|+||-.|..+-+..+ .+..+-+..+.++ |.|+.+|.|||-......
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~ 99 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEG 99 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCC
Confidence 45667776666 3666666543 58999999999988764 1122234455666 999999999996654332
Q ss_pred -cccchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhh--
Q 022960 93 -LYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQR-- 168 (289)
Q Consensus 93 -~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~-- 168 (289)
...+.++.++++..+++++ +.+.++-+|.-.|++|..++|..+|+ |-++|++++......++ ++....+...
T Consensus 100 y~yPsmd~LAd~l~~VL~~f---~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi-ew~~~K~~s~~l 175 (326)
T KOG2931|consen 100 YPYPSMDDLADMLPEVLDHF---GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI-EWAYNKVSSNLL 175 (326)
T ss_pred CCCCCHHHHHHHHHHHHHhc---CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH-HHHHHHHHHHHH
Confidence 3567899999999999999 88899999999999999999999999 99999998755433222 1111111110
Q ss_pred ------------hhhcCccccccccccc---------ccccChhhhhhhh---cc--chhhhh--cccccCceEEEEEeC
Q 022960 169 ------------IKQNGFIDVRNKKGKL---------EYRVTQESLMDRL---ST--DIHAAC--HMICQDCRVLTIHGT 220 (289)
Q Consensus 169 ------------~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~---~~--~~~~~~--~~~~~~~P~l~i~g~ 220 (289)
+....|..-....... .....+..+...+ .. +..... ....++||+|++.|+
T Consensus 176 ~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd 255 (326)
T KOG2931|consen 176 YYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGD 255 (326)
T ss_pred HhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecC
Confidence 0001111000000000 0001111111111 10 000000 001346999999999
Q ss_pred CCCccChhhHHHHHhhCC--CcEEEEEcCCCccccc-CchHHHHHHHHHHHhh
Q 022960 221 KDKMVPAEDALEFDKFIP--NHKLHIIEGADHEFTS-HQDELASLVIQFIKAN 270 (289)
Q Consensus 221 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-~~~~~~~~i~~fl~~~ 270 (289)
+.+.+ +.+.++...+. +..+..+.++|-.+.+ .|..+.+.+.-|++..
T Consensus 256 ~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 256 NSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred CCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 98765 55556666663 4788999999998886 6788999999999753
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.61 E-value=6e-14 Score=98.89 Aligned_cols=183 Identities=21% Similarity=0.250 Sum_probs=122.1
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEEEEEe
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITAIIGH 124 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~ 124 (289)
..+||+-|-||-.. +-..+++.|+++|+.|+.+|-+-|-.+.+ +.++.+.|+.+++++..++ +.++++|+|+
T Consensus 3 t~~v~~SGDgGw~~--~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-----tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD--LDKQIAEALAKQGVPVVGVDSLRYFWSER-----TPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCCCCchh--hhHHHHHHHHHCCCeEEEechHHHHhhhC-----CHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 46788888888763 46789999999999999999875544432 4477789999999988777 7889999999
Q ss_pred ChhHHHHHHHHHhCCC-----ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhcc
Q 022960 125 SKGGNAVLLYASKYND-----ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST 199 (289)
Q Consensus 125 S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (289)
|+|+-+......+.|. |+.++++++.....-.+ ....|+..-... ...
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFei---hv~~wlg~~~~~------------------------~~~ 128 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEI---HVSGWLGMGGDD------------------------AAY 128 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEE---EhhhhcCCCCCc------------------------ccC
Confidence 9999998888887764 88999998754322111 000000000000 000
Q ss_pred chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHh
Q 022960 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 200 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
+.......+. ..|+++|+|++|.-.... .+. .++.+.+.+|| ||.|-.+.+.+.+.|.+-++.
T Consensus 129 ~~~pei~~l~-~~~v~CiyG~~E~d~~cp---~l~--~~~~~~i~lpG-gHHfd~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 129 PVIPEIAKLP-PAPVQCIYGEDEDDSLCP---SLR--QPGVEVIALPG-GHHFDGDYDALAKRILDALKA 191 (192)
T ss_pred CchHHHHhCC-CCeEEEEEcCCCCCCcCc---ccc--CCCcEEEEcCC-CcCCCCCHHHHHHHHHHHHhc
Confidence 1111111121 469999999988642211 111 25789999997 676666677888888777653
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.7e-13 Score=91.40 Aligned_cols=183 Identities=20% Similarity=0.244 Sum_probs=118.4
Q ss_pred ecCCC-cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCC-----CCCccccch-HHHHHHHHHHHHHHHh
Q 022960 41 ETGSK-QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGES-----EGSFLYGNY-RREAEDLRAIVQDFCA 113 (289)
Q Consensus 41 ~~~~~-~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s-----~~~~~~~~~-~~~~~d~~~~i~~l~~ 113 (289)
++++. .+||+-||.|++.++......+..|+.+|+.|..++++..-.. ..++...+. +.+...+.++-..+
T Consensus 9 pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l-- 86 (213)
T COG3571 9 PAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL-- 86 (213)
T ss_pred CCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc--
Confidence 44544 4789999999998887788999999999999999998854322 122222111 22222333332222
Q ss_pred cCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhh
Q 022960 114 KGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQES 192 (289)
Q Consensus 114 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (289)
.-.++++-|+||||.++..++....- |+++++++=++...-. .+....
T Consensus 87 -~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGK-Pe~~Rt----------------------------- 135 (213)
T COG3571 87 -AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGK-PEQLRT----------------------------- 135 (213)
T ss_pred -cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCC-cccchh-----------------------------
Confidence 34489999999999999998877655 9999988754432210 000000
Q ss_pred hhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccC-----------chHHHH
Q 022960 193 LMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSH-----------QDELAS 261 (289)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----------~~~~~~ 261 (289)
.....+++|+||++|+.|++-..+... -+...+..++++++++.|.+-.. -...++
T Consensus 136 ------------~HL~gl~tPtli~qGtrD~fGtr~~Va-~y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~ 202 (213)
T COG3571 136 ------------EHLTGLKTPTLITQGTRDEFGTRDEVA-GYALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAE 202 (213)
T ss_pred ------------hhccCCCCCeEEeecccccccCHHHHH-hhhcCCceEEEEeccCccccccccccccccHHHHHHHHHH
Confidence 000134899999999999987766652 22333568999999999985211 123566
Q ss_pred HHHHHHHh
Q 022960 262 LVIQFIKA 269 (289)
Q Consensus 262 ~i~~fl~~ 269 (289)
+|..|...
T Consensus 203 ~va~~~~~ 210 (213)
T COG3571 203 QVAGWARR 210 (213)
T ss_pred HHHHHHhh
Confidence 77777654
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.2e-13 Score=106.65 Aligned_cols=216 Identities=15% Similarity=0.081 Sum_probs=126.5
Q ss_pred CCceEEEEEeec--C---CCcEEEEEcCCCCCCCC-cch-HHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHH
Q 022960 31 HGEKLVGILHET--G---SKQLVIVCHGFQSTKDR-IPM-VNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAED 103 (289)
Q Consensus 31 ~g~~l~~~~~~~--~---~~~~iv~~hG~~~~~~~-~~~-~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d 103 (289)
++..+.+..+.| . ..|+||++||++..... ... ..+...+...|+.|+.+|||- .....+....+|
T Consensus 60 ~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrl-------aPe~~~p~~~~d 132 (312)
T COG0657 60 SGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRL-------APEHPFPAALED 132 (312)
T ss_pred CCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCC-------CCCCCCCchHHH
Confidence 333344555554 2 47999999998854322 113 445555566799999999993 333456777888
Q ss_pred HHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCC-----CccEEEEeccCCccccccccc--------ccch
Q 022960 104 LRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYN-----DISIVINISGRFNLKRGIEGR--------LGLG 164 (289)
Q Consensus 104 ~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~~~~~~~~~~--------~~~~ 164 (289)
+.+++.++.++ +.++|+++|+|.||.+++.++.... ...+.++++|..+........ +...
T Consensus 133 ~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~ 212 (312)
T COG0657 133 AYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDAA 212 (312)
T ss_pred HHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccccCHH
Confidence 88899888766 3679999999999999999887643 378999999987766410000 0000
Q ss_pred hHh-hhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccC--hhhHHHHHhhCCCcE
Q 022960 165 YLQ-RIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVP--AEDALEFDKFIPNHK 241 (289)
Q Consensus 165 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~ 241 (289)
... .+............. . ...-+..+ . ... -.|+++++|+.|.+.+ ...++.+.+.-..++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--------p-~~spl~~~---~--~~~-lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~ 277 (312)
T COG0657 213 AILAWFADLYLGAAPDRED--------P-EASPLASD---D--LSG-LPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVE 277 (312)
T ss_pred HHHHHHHHHhCcCccccCC--------C-ccCccccc---c--ccC-CCCEEEEecCCCcchhHHHHHHHHHHHcCCeEE
Confidence 000 000000000000000 0 00000000 0 011 3689999999999987 222333444444579
Q ss_pred EEEEcCCCcccc--cCc--hHHHHHHHHHHH
Q 022960 242 LHIIEGADHEFT--SHQ--DELASLVIQFIK 268 (289)
Q Consensus 242 ~~~~~~~gH~~~--~~~--~~~~~~i~~fl~ 268 (289)
+..+++..|.+. ..+ .+....+.+|+.
T Consensus 278 ~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 278 LRVYPGMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred EEEeCCcceeccccCcHHHHHHHHHHHHHHH
Confidence 999999999874 221 233455666665
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.3e-15 Score=90.47 Aligned_cols=76 Identities=30% Similarity=0.529 Sum_probs=64.7
Q ss_pred CceEEEEEeecC-C-CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHHHH
Q 022960 32 GEKLVGILHETG-S-KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIV 108 (289)
Q Consensus 32 g~~l~~~~~~~~-~-~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i 108 (289)
|.+|+++.+.|. + +.+|+++||++.+... |..+++.|+++||.|+++|+||||.|.+.. ...++++.++|+..++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~r--y~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGR--YAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHH--HHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 567888877765 3 7899999999998864 999999999999999999999999999755 3467888899998876
Q ss_pred H
Q 022960 109 Q 109 (289)
Q Consensus 109 ~ 109 (289)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 3
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.5e-13 Score=110.76 Aligned_cols=226 Identities=15% Similarity=0.168 Sum_probs=139.7
Q ss_pred eeEEeeCCCCceEEEEEeecC------CCcEEEEEcCCCCCC---CCcchHH--HHHHHHHcCccEEEEccccCCCCCCC
Q 022960 23 RRVVIPNSHGEKLVGILHETG------SKQLVIVCHGFQSTK---DRIPMVN--LAAALEREGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~---~~~~~~~--~~~~l~~~G~~v~~~d~~G~G~s~~~ 91 (289)
+-+.+.+..|..+++.++.|. +-|+++++-|+++.. +++.+.. -...|+..||.|+++|-||.-.....
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 557778888999999888663 468999999988632 1121221 23467888999999999997655433
Q ss_pred ccc-----cchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccc
Q 022960 92 FLY-----GNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRL 161 (289)
Q Consensus 92 ~~~-----~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~ 161 (289)
+.. .. .-.++|-.+.+++|.++ +.++|.+-|+|+||++++....++|+ ++..|.-+|..++. . .
T Consensus 694 FE~~ik~kmG-qVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~-~----Y 767 (867)
T KOG2281|consen 694 FESHIKKKMG-QVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWR-L----Y 767 (867)
T ss_pred hHHHHhhccC-eeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeee-e----e
Confidence 210 00 11135555555666555 67899999999999999999999999 66666555543321 1 1
Q ss_pred cchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----
Q 022960 162 GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI---- 237 (289)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---- 237 (289)
...+..+. ..............+.......+. . -....|++||--|+.|.+.+...+...+
T Consensus 768 DTgYTERY-----Mg~P~~nE~gY~agSV~~~Veklp--------d--epnRLlLvHGliDENVHF~Hts~Lvs~lvkag 832 (867)
T KOG2281|consen 768 DTGYTERY-----MGYPDNNEHGYGAGSVAGHVEKLP--------D--EPNRLLLVHGLIDENVHFAHTSRLVSALVKAG 832 (867)
T ss_pred cccchhhh-----cCCCccchhcccchhHHHHHhhCC--------C--CCceEEEEecccccchhhhhHHHHHHHHHhCC
Confidence 11111111 111100000000001111111111 1 1446899999999999988777665554
Q ss_pred CCcEEEEEcCCCcccc--cCchHHHHHHHHHHHh
Q 022960 238 PNHKLHIIEGADHEFT--SHQDELASLVIQFIKA 269 (289)
Q Consensus 238 ~~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~ 269 (289)
+..++.++|+.-|.+- +...-+-..+..|+++
T Consensus 833 KpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 833 KPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 4469999999999964 3345567778888875
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.1e-13 Score=118.52 Aligned_cols=228 Identities=17% Similarity=0.206 Sum_probs=145.0
Q ss_pred cceeeEEeeCCCCceEEEEEeecC------CCcEEEEEcCCCCCCCC--cchHHHHHH-HHHcCccEEEEccccCCCCCC
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG------SKQLVIVCHGFQSTKDR--IPMVNLAAA-LEREGISAFRFDFSGNGESEG 90 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~--~~~~~~~~~-l~~~G~~v~~~d~~G~G~s~~ 90 (289)
....++.+ +|....+....|+ +-|.+|.+||++++... .+-..+... ....|+.|+.+|.||.|....
T Consensus 498 ~~~~~i~~---~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~ 574 (755)
T KOG2100|consen 498 VEFGKIEI---DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGW 574 (755)
T ss_pred ceeEEEEe---ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcch
Confidence 34444444 7877777665442 45788999999973211 112233334 556699999999999876654
Q ss_pred Ccccc---ch-HHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC--ccEEEEeccCCcccccccccc
Q 022960 91 SFLYG---NY-RREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND--ISIVINISGRFNLKRGIEGRL 161 (289)
Q Consensus 91 ~~~~~---~~-~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~~~~ 161 (289)
..... .+ ...++|...+++.+.+. +.+++.++|+|+||++++.++...|. ++..+.++|..++. ......
T Consensus 575 ~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~ 653 (755)
T KOG2100|consen 575 DFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTY 653 (755)
T ss_pred hHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccc
Confidence 32111 11 12356777777766655 67799999999999999999999984 67779999987765 211111
Q ss_pred cchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCce-EEEEEeCCCCccChhhHHHHHhhCC--
Q 022960 162 GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCR-VLTIHGTKDKMVPAEDALEFDKFIP-- 238 (289)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~-- 238 (289)
...++ . ...... ....+ ........ .++.| .|++||+.|..|+.+++..+.+.+.
T Consensus 654 terym----g-----~p~~~~--------~~y~e---~~~~~~~~--~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~ 711 (755)
T KOG2100|consen 654 TERYM----G-----LPSEND--------KGYEE---SSVSSPAN--NIKTPKLLLIHGTEDDNVHFQQSAILIKALQNA 711 (755)
T ss_pred cHhhc----C-----CCcccc--------chhhh---ccccchhh--hhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHC
Confidence 11110 0 000000 00000 01111111 12444 5999999999999999888887764
Q ss_pred --CcEEEEEcCCCcccccCc--hHHHHHHHHHHHhhcCC
Q 022960 239 --NHKLHIIEGADHEFTSHQ--DELASLVIQFIKANYQK 273 (289)
Q Consensus 239 --~~~~~~~~~~gH~~~~~~--~~~~~~i~~fl~~~~~~ 273 (289)
..++.++|+..|.+.... ..+...+..|+..++..
T Consensus 712 gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 712 GVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred CCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCc
Confidence 278999999999976544 67899999999976654
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-13 Score=98.08 Aligned_cols=181 Identities=18% Similarity=0.197 Sum_probs=117.2
Q ss_pred CCcEEEEEcCCCCCCCCc--chHHHHHHHHHcCccEEEEcccc------CCCCCC------Cc---------------cc
Q 022960 44 SKQLVIVCHGFQSTKDRI--PMVNLAAALEREGISAFRFDFSG------NGESEG------SF---------------LY 94 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~G------~G~s~~------~~---------------~~ 94 (289)
.++-|+|+||+-.+.... -...+.+.|.+. +..+.+|-|- .-.+.+ +. ..
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 457899999999887530 122355566665 7777777662 111100 00 00
Q ss_pred cchHHHHHHHHHHHHHHHhcCCceE-EEEEeChhHHHHHHHHHh---------CCCccEEEEeccCCcccccccccccch
Q 022960 95 GNYRREAEDLRAIVQDFCAKGRVIT-AIIGHSKGGNAVLLYASK---------YNDISIVINISGRFNLKRGIEGRLGLG 164 (289)
Q Consensus 95 ~~~~~~~~d~~~~i~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~---------~p~v~~~v~~~~~~~~~~~~~~~~~~~ 164 (289)
..+...-+-+..+.+++.+++ ++ .|+|+|.|+.++..++.. .|.++-+|++++.........
T Consensus 83 ~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~------ 154 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLD------ 154 (230)
T ss_pred ccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhh------
Confidence 011111233556666666664 33 899999999999998872 234788888887543321100
Q ss_pred hHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEE
Q 022960 165 YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHI 244 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 244 (289)
.......+++|.|.|.|+.|.++|...++.|++.+++..++.
T Consensus 155 --------------------------------------~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~ 196 (230)
T KOG2551|consen 155 --------------------------------------ESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLE 196 (230)
T ss_pred --------------------------------------hhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEe
Confidence 000111458999999999999999999999999999997777
Q ss_pred EcCCCcccccCchHHHHHHHHHHHhhcCC
Q 022960 245 IEGADHEFTSHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 245 ~~~~gH~~~~~~~~~~~~i~~fl~~~~~~ 273 (289)
-+ +||.+... ..+.+.|.+||...+..
T Consensus 197 Hp-ggH~VP~~-~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 197 HP-GGHIVPNK-AKYKEKIADFIQSFLQE 223 (230)
T ss_pred cC-CCccCCCc-hHHHHHHHHHHHHHHHh
Confidence 77 49997532 37788888888876644
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.1e-14 Score=104.69 Aligned_cols=169 Identities=23% Similarity=0.223 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccch-hHhhhhhcCcccc
Q 022960 102 EDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLG-YLQRIKQNGFIDV 177 (289)
Q Consensus 102 ~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (289)
+.+.+++++|+++ +.++|.|+|.|.||-+|+.+|..+|+|+++|.++|............... ....+........
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 83 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS 83 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce
Confidence 4567888999887 34689999999999999999999999999999998654433222111110 0000000000000
Q ss_pred cccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhh-HHHHHhhC-----C-CcEEEEEcCCCc
Q 022960 178 RNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED-ALEFDKFI-----P-NHKLHIIEGADH 250 (289)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~-----~-~~~~~~~~~~gH 250 (289)
.................... .......-.++++|+|++.|++|.+.|... ++.+.+++ + +.+++.|+++||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~--~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH 161 (213)
T PF08840_consen 84 WNEPGLLRSRYAFELADDKA--VEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGH 161 (213)
T ss_dssp E-TTS-EE-TT-B--TTTGG--GCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S
T ss_pred ecCCcceehhhhhhcccccc--cccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCc
Confidence 00000000000000000000 011112223569999999999999988553 33333332 2 368899999999
Q ss_pred ccc---c--------------------------CchHHHHHHHHHHHhhcC
Q 022960 251 EFT---S--------------------------HQDELASLVIQFIKANYQ 272 (289)
Q Consensus 251 ~~~---~--------------------------~~~~~~~~i~~fl~~~~~ 272 (289)
.+. . ..++.++.+.+||++++.
T Consensus 162 ~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 162 LIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp ---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred eecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 842 0 013578899999998874
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-12 Score=97.51 Aligned_cols=166 Identities=16% Similarity=0.133 Sum_probs=109.5
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-------
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK------- 114 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~------- 114 (289)
.+.-|++||+||+..... +|..+.+.++++||.|+.+|+...+... -....+++.++++|+.+.
T Consensus 14 ~g~yPVv~f~~G~~~~~s--~Ys~ll~hvAShGyIVV~~d~~~~~~~~-------~~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINS--WYSQLLEHVASHGYIVVAPDLYSIGGPD-------DTDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CCCcCEEEEeCCcCCCHH--HHHHHHHHHHhCceEEEEecccccCCCC-------cchhHHHHHHHHHHHHhcchhhccc
Confidence 456799999999995543 4999999999999999999976533211 123355666666665442
Q ss_pred ----CCceEEEEEeChhHHHHHHHHHhC-----CC-ccEEEEeccCCcccccccccccchhHhhhhhcCccccccccccc
Q 022960 115 ----GRVITAIIGHSKGGNAVLLYASKY-----ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKL 184 (289)
Q Consensus 115 ----~~~~~~l~G~S~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (289)
+..++.|.|||.||-+|..++..+ +. ++++|+++|........ ......
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~--~~~P~v------------------- 143 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGS--QTEPPV------------------- 143 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccccccccc--CCCCcc-------------------
Confidence 456899999999999999988886 33 99999999865322110 000000
Q ss_pred ccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCC---------ccChh-hHHHHHhhCCC-cEEEEEcCCCcccc
Q 022960 185 EYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDK---------MVPAE-DALEFDKFIPN-HKLHIIEGADHEFT 253 (289)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~---------~~~~~-~~~~~~~~~~~-~~~~~~~~~gH~~~ 253 (289)
... .....+...|++++-..-+. ..|.. ..+++++.++. +-..+..+.||+-+
T Consensus 144 ---------~~~-------~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~ 207 (259)
T PF12740_consen 144 ---------LTY-------TPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDF 207 (259)
T ss_pred ---------ccC-------cccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHh
Confidence 000 00111236899999776664 22322 45677777754 55666788999943
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.5e-14 Score=103.24 Aligned_cols=169 Identities=19% Similarity=0.176 Sum_probs=97.8
Q ss_pred CCcEEEEEcCCCCCCCCcchHH--HHHHHHHc-CccEEEEccccCCCCCCCc---c--ccchHHHHHHHHHHHHHHHhc-
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVN--LAAALERE-GISAFRFDFSGNGESEGSF---L--YGNYRREAEDLRAIVQDFCAK- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~--~~~~l~~~-G~~v~~~d~~G~G~s~~~~---~--~~~~~~~~~d~~~~i~~l~~~- 114 (289)
+.|.||++||.+++... +.. -...|+++ ||.|+.++........... . ...-......+.++++++..+
T Consensus 15 ~~PLVv~LHG~~~~a~~--~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~ 92 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAED--FAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARY 92 (220)
T ss_pred CCCEEEEeCCCCCCHHH--HHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhc
Confidence 46899999999998754 221 12345554 8999988854221111100 0 000012345677777777666
Q ss_pred --CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChh
Q 022960 115 --GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQE 191 (289)
Q Consensus 115 --~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (289)
+.++|++.|+|.||.++..++..+|+ +.++..+++.......- .. .. ...+. .... ..+.
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~--~~-~a-~~~m~-~g~~------------~~p~ 155 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAAS--GA-SA-LSAMR-SGPR------------PAPA 155 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccC--cc-cH-HHHhh-CCCC------------CChH
Confidence 67799999999999999999999999 88888887753221100 00 00 00010 0000 0000
Q ss_pred hhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC
Q 022960 192 SLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI 237 (289)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 237 (289)
....... .... ....|++++||+.|..|.+...+++.+.+
T Consensus 156 ~~~~a~~-----~~g~-~~~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 156 AAWGARS-----DAGA-YPGYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred HHHHhhh-----hccC-CCCCCEEEEecCCCCccCcchHHHHHHHH
Confidence 0000000 0000 01459999999999999999888877665
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-12 Score=89.90 Aligned_cols=172 Identities=14% Similarity=0.078 Sum_probs=110.8
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEe
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGH 124 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~ 124 (289)
.+.+|++||+.++....+...+...|. .+-.+++. ......++++++.+.+.+..+ .++++||+|
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l~----~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~----~~~~vlVAH 66 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESALP----NARRVEQD-------DWEAPVLDDWIARLEKEVNAA----EGPVVLVAH 66 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhCc----cchhcccC-------CCCCCCHHHHHHHHHHHHhcc----CCCeEEEEe
Confidence 357899999999885422222222332 23333333 222335677777777666654 235999999
Q ss_pred ChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhh
Q 022960 125 SKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHA 203 (289)
Q Consensus 125 S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (289)
|+|+..++.++..... |.|+++++|+..-........ .. .+.
T Consensus 67 SLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~----~~----------------------------tf~----- 109 (181)
T COG3545 67 SLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKH----LM----------------------------TFD----- 109 (181)
T ss_pred cccHHHHHHHHHhhhhccceEEEecCCCccccccchhh----cc----------------------------ccC-----
Confidence 9999999999988766 999999998643322110000 00 000
Q ss_pred hhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccC----chHHHHHHHHHHHh
Q 022960 204 ACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSH----QDELASLVIQFIKA 269 (289)
Q Consensus 204 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~i~~fl~~ 269 (289)
.....+..-|.+++.+.+|++++++.++.+++.+ ++.++.+..+||..-+. -++....+.+|+.+
T Consensus 110 ~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w-gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 110 PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW-GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CCccccCCCceeEEEecCCCCCCHHHHHHHHHhc-cHhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 0011123569999999999999999999999998 66788888899985422 25556666666544
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-12 Score=100.51 Aligned_cols=105 Identities=15% Similarity=0.174 Sum_probs=87.4
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHc---CccEEEEccccCCCCCCC------ccccchHHHHHHHHHHHHHHHhc-
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALERE---GISAFRFDFSGNGESEGS------FLYGNYRREAEDLRAIVQDFCAK- 114 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~---G~~v~~~d~~G~G~s~~~------~~~~~~~~~~~d~~~~i~~l~~~- 114 (289)
+..+|+++|.+|-.+ +|..+.+.|.+. .+.|+++.+.||..+... ...++++++++-..++++.+...
T Consensus 2 ~~li~~IPGNPGlv~--fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE--FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCChHH--HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 568999999999984 589998888854 699999999999877654 24567888888888888877664
Q ss_pred --CCceEEEEEeChhHHHHHHHHHhCC---C-ccEEEEeccCC
Q 022960 115 --GRVITAIIGHSKGGNAVLLYASKYN---D-ISIVINISGRF 151 (289)
Q Consensus 115 --~~~~~~l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~ 151 (289)
...+++++|||.|++++++++.+.+ . |.+++++-|..
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 4568999999999999999999999 3 89999998864
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-12 Score=105.50 Aligned_cols=178 Identities=15% Similarity=0.181 Sum_probs=101.0
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCC------CCC------------------c----cc
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGES------EGS------------------F----LY 94 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s------~~~------------------~----~~ 94 (289)
++-|+|||-||++++... |..++..|+++||.|+++|.|..-.. +.. . ..
T Consensus 98 ~~~PvvIFSHGlgg~R~~--yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTS--YSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT--TTT--THHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcchhh--HHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 567999999999999965 99999999999999999999953211 000 0 00
Q ss_pred c-------chHHHHHHHHHHHHHHHhc-----------------------CCceEEEEEeChhHHHHHHHHHhCCCccEE
Q 022960 95 G-------NYRREAEDLRAIVQDFCAK-----------------------GRVITAIIGHSKGGNAVLLYASKYNDISIV 144 (289)
Q Consensus 95 ~-------~~~~~~~d~~~~i~~l~~~-----------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~ 144 (289)
. ....-+.++..+++.|.+. +.++++++|||+||..++..+....++++.
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~ 255 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAG 255 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceE
Confidence 0 0011246677777766531 245899999999999999988888779999
Q ss_pred EEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCc
Q 022960 145 INISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKM 224 (289)
Q Consensus 145 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 224 (289)
|+++|+...... . . . ..++.|+|+|.++. +
T Consensus 256 I~LD~W~~Pl~~-------~---------------------------~------------~--~~i~~P~L~InSe~--f 285 (379)
T PF03403_consen 256 ILLDPWMFPLGD-------E---------------------------I------------Y--SKIPQPLLFINSES--F 285 (379)
T ss_dssp EEES---TTS-G-------G---------------------------G------------G--GG--S-EEEEEETT--T
T ss_pred EEeCCcccCCCc-------c---------------------------c------------c--cCCCCCEEEEECcc--c
Confidence 999986431100 0 0 0 02378999998875 2
Q ss_pred cChhhHHHHHhh---CCCcEEEEEcCCCccccc--------------------Cc----hHHHHHHHHHHHhhcC
Q 022960 225 VPAEDALEFDKF---IPNHKLHIIEGADHEFTS--------------------HQ----DELASLVIQFIKANYQ 272 (289)
Q Consensus 225 ~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~--------------------~~----~~~~~~i~~fl~~~~~ 272 (289)
........+.+. -++..++.+.|+.|.-+. ++ +...+.+.+||++++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 286 QWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLG 360 (379)
T ss_dssp --HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT
T ss_pred CChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 223333344332 245788999999997321 12 1356678899998875
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.5e-13 Score=117.88 Aligned_cols=112 Identities=21% Similarity=0.277 Sum_probs=84.9
Q ss_pred EEeeCCCCceEEEEEeec---------CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCC----
Q 022960 25 VVIPNSHGEKLVGILHET---------GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS---- 91 (289)
Q Consensus 25 ~~~~~~~g~~l~~~~~~~---------~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~---- 91 (289)
+.+...++.++.+..... +..|+||++||++++... |..+++.|.++||+|+++|+||||.|...
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~--~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~ 497 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKEN--ALAFAGTLAAAGVATIAIDHPLHGARSFDANAS 497 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHH--HHHHHHHHHhCCcEEEEeCCCCCCccccccccc
Confidence 344455666655443211 134689999999999865 89999999999999999999999999432
Q ss_pred ------cc-------------ccchHHHHHHHHHHHHHHH------h-------cCCceEEEEEeChhHHHHHHHHHhC
Q 022960 92 ------FL-------------YGNYRREAEDLRAIVQDFC------A-------KGRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 92 ------~~-------------~~~~~~~~~d~~~~i~~l~------~-------~~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
.. ..++.+.+.|+..+...+. . .+..+++++||||||.++..++...
T Consensus 498 ~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 498 GVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred cccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 10 1266888899999988886 1 1345899999999999999998753
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=7.6e-13 Score=93.10 Aligned_cols=183 Identities=13% Similarity=0.150 Sum_probs=121.5
Q ss_pred EEeec-CCCcEEEEEcCCCCCCCC-cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-
Q 022960 38 ILHET-GSKQLVIVCHGFQSTKDR-IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK- 114 (289)
Q Consensus 38 ~~~~~-~~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~- 114 (289)
.+|++ ...+.+||+||+--.... ..-...+..+.++||+|..+++- .+. ....+.+.+.++...++++.+.
T Consensus 59 DIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~---q~htL~qt~~~~~~gv~filk~~ 132 (270)
T KOG4627|consen 59 DIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCP---QVHTLEQTMTQFTHGVNFILKYT 132 (270)
T ss_pred EEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCc---ccccHHHHHHHHHHHHHHHHHhc
Confidence 35554 477899999996532211 12344556677789999998763 222 2235666677777777777655
Q ss_pred -CCceEEEEEeChhHHHHHHHHHhC--CCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChh
Q 022960 115 -GRVITAIIGHSKGGNAVLLYASKY--NDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQE 191 (289)
Q Consensus 115 -~~~~~~l~G~S~Gg~~a~~~a~~~--p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (289)
..+.+.+-|||.|+.+|+.+..+. |.|.++++.++.+++............ ..+.+
T Consensus 133 ~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dl---------------------gLt~~ 191 (270)
T KOG4627|consen 133 ENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDL---------------------GLTER 191 (270)
T ss_pred ccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcccccc---------------------Ccccc
Confidence 556789999999999999987765 449999999998876543322211100 00000
Q ss_pred hhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcc
Q 022960 192 SLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE 251 (289)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 251 (289)
.. +....+.. .. ..++.|+|++.+++|..--.++.+.+.+.+..+.+..+++.+|+
T Consensus 192 ~a-e~~Scdl~-~~--~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy 247 (270)
T KOG4627|consen 192 NA-ESVSCDLW-EY--TDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHY 247 (270)
T ss_pred hh-hhcCccHH-Hh--cCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchh
Confidence 00 00011111 11 13478999999999977667889999999989999999999999
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.1e-13 Score=98.22 Aligned_cols=166 Identities=17% Similarity=0.243 Sum_probs=84.0
Q ss_pred CCcEEEEEcCCCCCCCC--cchHHHHHHHHHcCccEEEEccccC-----CCCC------------CCc-cc-------cc
Q 022960 44 SKQLVIVCHGFQSTKDR--IPMVNLAAALEREGISAFRFDFSGN-----GESE------------GSF-LY-------GN 96 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~G~-----G~s~------------~~~-~~-------~~ 96 (289)
.++-||++||++.+... .....+.+.|.+.++.++.+|-|-- |-.. .+. .. ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 46789999999999853 1123455556553588888875521 1110 000 00 01
Q ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC---------CCccEEEEeccCCcccccccccccchhHh
Q 022960 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY---------NDISIVINISGRFNLKRGIEGRLGLGYLQ 167 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~---------p~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 167 (289)
+....+.+..+.+.+.+.+. =..|+|+|.||.+|..++... |.++.+|++++.........
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~--------- 152 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQ--------- 152 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GT---------
T ss_pred ccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhh---------
Confidence 22222333334444444342 248999999999999888642 23889999988654322100
Q ss_pred hhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEc
Q 022960 168 RIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIE 246 (289)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~ 246 (289)
..+ ...++++|+|.|+|++|.+++++.++.+.+.+.+ .+++..+
T Consensus 153 ---------------------------~~~--------~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~ 197 (212)
T PF03959_consen 153 ---------------------------ELY--------DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD 197 (212)
T ss_dssp ---------------------------TTT----------TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES
T ss_pred ---------------------------hhh--------ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC
Confidence 000 1114589999999999999999999999999877 7888887
Q ss_pred CCCcccccC
Q 022960 247 GADHEFTSH 255 (289)
Q Consensus 247 ~~gH~~~~~ 255 (289)
+ ||.+...
T Consensus 198 g-GH~vP~~ 205 (212)
T PF03959_consen 198 G-GHHVPRK 205 (212)
T ss_dssp S-SSS----
T ss_pred C-CCcCcCC
Confidence 5 8886533
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.4e-12 Score=103.69 Aligned_cols=136 Identities=19% Similarity=0.194 Sum_probs=106.5
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCC---CcchHHHHH---HHHHcCccEEEEccccCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKD---RIPMVNLAA---ALEREGISAFRFDFSGNGES 88 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~---~~~~~~~~~---~l~~~G~~v~~~d~~G~G~s 88 (289)
.++..+++.++..||++|+..++.|. +.|+++..+-++-... .+......+ .++.+||.|+..|.||.|.|
T Consensus 15 ~~~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~S 94 (563)
T COG2936 15 AGYIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGS 94 (563)
T ss_pred cceeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccC
Confidence 34677889999999999999888654 6788888882222221 011222334 57888999999999999999
Q ss_pred CCCccccchHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 89 EGSFLYGNYRREAEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 89 ~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
.+......- +.++|-.+.|+|+.++ ...+|..+|.|++|...+.+|+..|. +++++..++..+..
T Consensus 95 eG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y 162 (563)
T COG2936 95 EGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRY 162 (563)
T ss_pred Ccccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccccc
Confidence 998765443 5788999999999888 45589999999999999999999877 99999998877643
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3e-12 Score=100.31 Aligned_cols=109 Identities=15% Similarity=0.170 Sum_probs=83.1
Q ss_pred CCcEEEEEcCCCCCCCC---cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHH-HHHHHHHHHHHhc-CCce
Q 022960 44 SKQLVIVCHGFQSTKDR---IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREA-EDLRAIVQDFCAK-GRVI 118 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~-~d~~~~i~~l~~~-~~~~ 118 (289)
-+++++++|.+....-. ..-..++..|.++|..|+.+++++-..+.. ..++++.+ +++.+.++.+++. +.++
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 35689999987754311 113568889999999999999987555543 33556666 7888888888776 6688
Q ss_pred EEEEEeChhHHHHHHHHHhCCC--ccEEEEeccCCcccc
Q 022960 119 TAIIGHSKGGNAVLLYASKYND--ISIVINISGRFNLKR 155 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~ 155 (289)
|.++|+|.||.++..+++..+. |++++++....++..
T Consensus 183 InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~ 221 (445)
T COG3243 183 INLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSH 221 (445)
T ss_pred cceeeEecchHHHHHHHHhhhhcccccceeeecchhhcc
Confidence 9999999999999998888875 999999887776543
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.6e-12 Score=90.07 Aligned_cols=175 Identities=19% Similarity=0.220 Sum_probs=117.9
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCC--------C----------CCccccchHHHHHHHHH
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGES--------E----------GSFLYGNYRREAEDLRA 106 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s--------~----------~~~~~~~~~~~~~d~~~ 106 (289)
..+||++||.+.+... |..+.+.|.-.+...+++.-|-.-.+ . ...+.......++.+..
T Consensus 3 ~atIi~LHglGDsg~~--~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG--WAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred eEEEEEEecCCCCCcc--HHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 4589999999999976 77777777666677777744421111 0 11123344455666777
Q ss_pred HHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc-ccccccccchhHhhhhhcCccccccccc
Q 022960 107 IVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK-RGIEGRLGLGYLQRIKQNGFIDVRNKKG 182 (289)
Q Consensus 107 ~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (289)
++++.... ..+++.+-|.|+||.+++..+..++. +.+++..++..... ..+.....
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~-------------------- 140 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLP-------------------- 140 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCcc--------------------
Confidence 77766665 45689999999999999999999987 88888777654421 11100000
Q ss_pred ccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----CCcEEEEEcCCCcccccCchH
Q 022960 183 KLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI----PNHKLHIIEGADHEFTSHQDE 258 (289)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~ 258 (289)
. .+ ..|++..||+.|++||....+...+.+ ..++++.++|.+|... .+
T Consensus 141 ----------------~--------~~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~---~~ 192 (206)
T KOG2112|consen 141 ----------------G--------VN-YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS---PQ 192 (206)
T ss_pred ----------------c--------cC-cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc---HH
Confidence 0 00 469999999999999987665544433 3478999999999852 34
Q ss_pred HHHHHHHHHHh
Q 022960 259 LASLVIQFIKA 269 (289)
Q Consensus 259 ~~~~i~~fl~~ 269 (289)
-.+.+..|+++
T Consensus 193 e~~~~~~~~~~ 203 (206)
T KOG2112|consen 193 ELDDLKSWIKT 203 (206)
T ss_pred HHHHHHHHHHH
Confidence 45667778775
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.2e-12 Score=95.14 Aligned_cols=154 Identities=18% Similarity=0.210 Sum_probs=94.2
Q ss_pred CCCceEEEEEeecC------CC-cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCC---CCCC-C--c--cc
Q 022960 30 SHGEKLVGILHETG------SK-QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNG---ESEG-S--F--LY 94 (289)
Q Consensus 30 ~~g~~l~~~~~~~~------~~-~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G---~s~~-~--~--~~ 94 (289)
.-|.++.|.++.|+ +- |.+||+||.|..+.. -.. .+.+ |.-.++.+.+-.+ .++. . + ..
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~d-n~~----~l~s-g~gaiawa~pedqcfVlAPQy~~if~d~e 242 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSD-NDK----VLSS-GIGAIAWAGPEDQCFVLAPQYNPIFADSE 242 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCch-hhh----hhhc-CccceeeecccCceEEEcccccccccccc
Confidence 45778988888663 33 899999999987653 111 2221 2333333333222 0000 0 0 00
Q ss_pred cchHHHHHHHHHHHH-HHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhh
Q 022960 95 GNYRREAEDLRAIVQ-DFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRI 169 (289)
Q Consensus 95 ~~~~~~~~d~~~~i~-~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
............+++ .+.++ +.+||+++|.|+||+.++.++.++|+ +.+.+++++.-+.....
T Consensus 243 ~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~lv------------ 310 (387)
T COG4099 243 EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYLV------------ 310 (387)
T ss_pred cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhhh------------
Confidence 011111222233333 33333 56799999999999999999999999 99999999854421000
Q ss_pred hhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC
Q 022960 170 KQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP 238 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (289)
.. ..+.|+.++|+.+|+++|.+.++-+.+.+.
T Consensus 311 -------------------------~~------------lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 311 -------------------------RT------------LKKAPIWVFHSSDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred -------------------------hh------------hccCceEEEEecCCCccccCcceeehHHHH
Confidence 00 116899999999999999998776665554
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=7.5e-11 Score=83.25 Aligned_cols=173 Identities=15% Similarity=0.138 Sum_probs=98.6
Q ss_pred EEEEcCCCCCCCCcchHHHHHHHH--HcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcC-CceEEEEEe
Q 022960 48 VIVCHGFQSTKDRIPMVNLAAALE--REGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKG-RVITAIIGH 124 (289)
Q Consensus 48 iv~~hG~~~~~~~~~~~~~~~~l~--~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~l~G~ 124 (289)
|+++||+.++..+. ..=++.+. .-+++++ +++ .......+..+.+.+..+...+ .+++.|||.
T Consensus 2 IlYlHGF~SS~~S~--~~Ka~~l~~~~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGN--HEKVLQLQFIDPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCcc--HHHHHhheeeCCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 79999999988651 11111221 1112222 221 0122333344555554332221 246899999
Q ss_pred ChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhh
Q 022960 125 SKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAA 204 (289)
Q Consensus 125 S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (289)
|+||+.|..++.++. + ..|+++|.+.....+....+.. .. ...++.. ..+.+.
T Consensus 68 SLGGyyA~~La~~~g-~-~aVLiNPAv~P~~~L~~~ig~~-----------------~~-y~~~~~~-h~~eL~------ 120 (180)
T PRK04940 68 GLGGYWAERIGFLCG-I-RQVIFNPNLFPEENMEGKIDRP-----------------EE-YADIATK-CVTNFR------ 120 (180)
T ss_pred ChHHHHHHHHHHHHC-C-CEEEECCCCChHHHHHHHhCCC-----------------cc-hhhhhHH-HHHHhh------
Confidence 999999999999875 4 5566888776644333222110 00 0011111 111111
Q ss_pred hcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc-EEEEEcCCCcccccCchHHHHHHHHHHH
Q 022960 205 CHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH-KLHIIEGADHEFTSHQDELASLVIQFIK 268 (289)
Q Consensus 205 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 268 (289)
.+-.-..+++..+.|++.+...+...+ .++ +..+.+|+.|.+. +-++....|.+|++
T Consensus 121 ---~~~p~r~~vllq~gDEvLDyr~a~~~y---~~~y~~~v~~GGdH~f~-~fe~~l~~I~~F~~ 178 (180)
T PRK04940 121 ---EKNRDRCLVILSRNDEVLDSQRTAEEL---HPYYEIVWDEEQTHKFK-NISPHLQRIKAFKT 178 (180)
T ss_pred ---hcCcccEEEEEeCCCcccCHHHHHHHh---ccCceEEEECCCCCCCC-CHHHHHHHHHHHHh
Confidence 111335689999999999877766544 444 6888999888863 35678889999984
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-11 Score=90.22 Aligned_cols=103 Identities=18% Similarity=0.233 Sum_probs=80.4
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-------
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK------- 114 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~------- 114 (289)
.|.-|+|+|+||+.-.. .+|..+...++++||.|+++++-.--. + +-.+.+++..++++|+.+.
T Consensus 43 ~G~yPVilF~HG~~l~n--s~Ys~lL~HIASHGfIVVAPQl~~~~~---p----~~~~Ei~~aa~V~~WL~~gL~~~Lp~ 113 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYN--SFYSQLLAHIASHGFIVVAPQLYTLFP---P----DGQDEIKSAASVINWLPEGLQHVLPE 113 (307)
T ss_pred CCCccEEEEeechhhhh--HHHHHHHHHHhhcCeEEEechhhcccC---C----CchHHHHHHHHHHHHHHhhhhhhCCC
Confidence 34679999999999876 469999999999999999999874211 1 1134467777777777543
Q ss_pred ----CCceEEEEEeChhHHHHHHHHHhC-CC--ccEEEEeccCCcc
Q 022960 115 ----GRVITAIIGHSKGGNAVLLYASKY-ND--ISIVINISGRFNL 153 (289)
Q Consensus 115 ----~~~~~~l~G~S~Gg~~a~~~a~~~-p~--v~~~v~~~~~~~~ 153 (289)
+..++.++|||.||-.|..+|..+ .+ +.++|.++|....
T Consensus 114 ~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 114 NVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred CcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 467999999999999999999877 34 8899999886543
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=6e-11 Score=86.52 Aligned_cols=201 Identities=16% Similarity=0.223 Sum_probs=126.6
Q ss_pred EEEEEcCCCCCCCCcchHHHHHHHHHcC-----ccEEEEccccC----CCCCCC-----------ccccchHHHHHHHHH
Q 022960 47 LVIVCHGFQSTKDRIPMVNLAAALEREG-----ISAFRFDFSGN----GESEGS-----------FLYGNYRREAEDLRA 106 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~~~~~~~~~l~~~G-----~~v~~~d~~G~----G~s~~~-----------~~~~~~~~~~~d~~~ 106 (289)
+.||+||.+|+..+ ...++.+|.+.+ --++.+|--|- |.-+.. ....+..++...+..
T Consensus 47 PTIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 47 PTIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ceEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 78999999999976 888999998874 12556666552 111110 112345667889999
Q ss_pred HHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC------CCccEEEEeccCCcccccccccccchhHhhhhhcCcccccc
Q 022960 107 IVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY------NDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRN 179 (289)
Q Consensus 107 ~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~------p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (289)
++.+|.++ ++.++.++||||||.-...++..+ |.+..+|.+++++.........-. . .+...
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v---~-~v~~~------- 193 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETV---T-DVLKD------- 193 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcch---h-eeecc-------
Confidence 99999888 888999999999999999999875 558999999988772111100000 0 00000
Q ss_pred cccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCC------CccChhhHHHHHhhCCCc----EEEEE--cC
Q 022960 180 KKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKD------KMVPAEDALEFDKFIPNH----KLHII--EG 247 (289)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D------~~~~~~~~~~~~~~~~~~----~~~~~--~~ 247 (289)
... .......+.+.. ....+...+.+|.|.|+-| ..||...+...+..+++. .-.++ ++
T Consensus 194 -~~~----~~~t~y~~y~~~----n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~ 264 (288)
T COG4814 194 -GPG----LIKTPYYDYIAK----NYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKD 264 (288)
T ss_pred -Ccc----ccCcHHHHHHHh----cceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCc
Confidence 000 000111111111 1111233678999999854 467777777777766541 22233 45
Q ss_pred CCcccccCchHHHHHHHHHHHh
Q 022960 248 ADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 248 ~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
+.|.-+.+.+.+...+..||-+
T Consensus 265 a~Hs~lhen~~v~~yv~~FLw~ 286 (288)
T COG4814 265 ARHSKLHENPTVAKYVKNFLWE 286 (288)
T ss_pred chhhccCCChhHHHHHHHHhhc
Confidence 7898777778888999999853
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.8e-11 Score=99.72 Aligned_cols=240 Identities=13% Similarity=0.058 Sum_probs=159.0
Q ss_pred CcccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
...+..++....+.||++|.|++...+ +.|++|+--|+...+....|......+.++|...+..+.||-|+=...-
T Consensus 389 a~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~W 468 (648)
T COG1505 389 ADNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEW 468 (648)
T ss_pred ccCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHH
Confidence 346778888889999999999877522 5788887777666555445666668888899999999999987654322
Q ss_pred c----ccchHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccch
Q 022960 93 L----YGNYRREAEDLRAIVQDFCAKGR---VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLG 164 (289)
Q Consensus 93 ~----~~~~~~~~~d~~~~i~~l~~~~~---~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~ 164 (289)
. ..+-....+|..++.+.|.++++ +++.+.|-|-||.+....+.+.|+ +.++|+--|.+++-+.-.-..+..
T Consensus 469 H~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~s 548 (648)
T COG1505 469 HQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSS 548 (648)
T ss_pred HHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchh
Confidence 1 11223446899999999988854 689999999999999988899999 888888778776544332233333
Q ss_pred hHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC--c--
Q 022960 165 YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN--H-- 240 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~-- 240 (289)
|...... +-.++................-..-.|+||-.+.+|..|.|.++++++..+.. .
T Consensus 549 W~~EYG~---------------Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv 613 (648)
T COG1505 549 WIAEYGN---------------PDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPV 613 (648)
T ss_pred hHhhcCC---------------CCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCce
Confidence 3222111 11122222222223333333223356999999999999999999998887743 2
Q ss_pred EEEEEcCCCcccccCchH---HHHHHHHHHHhhc
Q 022960 241 KLHIIEGADHEFTSHQDE---LASLVIQFIKANY 271 (289)
Q Consensus 241 ~~~~~~~~gH~~~~~~~~---~~~~i~~fl~~~~ 271 (289)
-+.+-.++||.--.+..+ -...+..||.+.+
T Consensus 614 ~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 614 LLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred EEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 333334689985433333 3444556666544
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=3e-11 Score=113.83 Aligned_cols=218 Identities=10% Similarity=0.071 Sum_probs=126.6
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
.+++++++++||++++. +.|..+.+.|.. ++.|+.++.+|++.+. ....+++++++++.+.++.+. ...++++
T Consensus 1065 ~~~~~~l~~lh~~~g~~--~~~~~l~~~l~~-~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~--~~~p~~l 1137 (1296)
T PRK10252 1065 EGDGPTLFCFHPASGFA--WQFSVLSRYLDP-QWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQ--PHGPYHL 1137 (1296)
T ss_pred cCCCCCeEEecCCCCch--HHHHHHHHhcCC-CCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhC--CCCCEEE
Confidence 34567899999999988 459999998876 4999999999998653 234577888888888887652 2347999
Q ss_pred EEeChhHHHHHHHHHh---CCC-ccEEEEeccCCccccccccc----ccchhHhhhhh--cCcccccccccccccccChh
Q 022960 122 IGHSKGGNAVLLYASK---YND-ISIVINISGRFNLKRGIEGR----LGLGYLQRIKQ--NGFIDVRNKKGKLEYRVTQE 191 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~---~p~-v~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 191 (289)
+|||+||.+|..+|.+ .++ +..++++++........... ........... ........ .. .......
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~ 1214 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQ--GS-LSTELFT 1214 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhh--cc-ccHHHHH
Confidence 9999999999999886 355 88998887643211000000 00000000000 00000000 00 0000001
Q ss_pred hhhhhhccch--hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHh
Q 022960 192 SLMDRLSTDI--HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 192 ~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
.+...+.... ........+.+|++++.+..|...+......+.+...+.+...++ ++|+.+..++. ...+.+++.+
T Consensus 1215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~v~-g~H~~~~~~~~-~~~~~~~l~~ 1292 (1296)
T PRK10252 1215 TIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWIAELDVYRQD-CAHVDIISPEA-FEKIGPILRA 1292 (1296)
T ss_pred HHHHHHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhcCCCEEEECC-CCHHHHCCcHH-HHHHHHHHHH
Confidence 1111111110 001112244789999999998766555555565555567777786 58997654443 3555556655
Q ss_pred hc
Q 022960 270 NY 271 (289)
Q Consensus 270 ~~ 271 (289)
.+
T Consensus 1293 ~l 1294 (1296)
T PRK10252 1293 TL 1294 (1296)
T ss_pred Hh
Confidence 43
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2e-10 Score=86.10 Aligned_cols=126 Identities=21% Similarity=0.172 Sum_probs=85.8
Q ss_pred eeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHH--HHHHHc-CccEEEEcc-cc------CCCC
Q 022960 23 RRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLA--AALERE-GISAFRFDF-SG------NGES 88 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~--~~l~~~-G~~v~~~d~-~G------~G~s 88 (289)
+..++. .+|.+..++++.|. ..|.||++||.+++... +.... +.|+++ ||-|+.+|- ++ .+.+
T Consensus 36 ~~~s~~-~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag--~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~ 112 (312)
T COG3509 36 SVASFD-VNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG--QLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNW 112 (312)
T ss_pred Cccccc-cCCCccceEEEcCCCCCCCCCEEEEEecCCCChHH--hhcccchhhhhcccCcEEECcCccccccCCCccccc
Confidence 344454 35667777777553 45799999999988753 33332 455544 899998842 22 2222
Q ss_pred CCCccccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 89 EGSFLYGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 89 ~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
..+.....=.+.+..+.+++..+..+ +..+|++.|.|-||.++..+++.+|+ +.++..+++..
T Consensus 113 ~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 113 FGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 22221111134467888888888777 55699999999999999999999999 88888887755
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.2e-12 Score=94.93 Aligned_cols=126 Identities=23% Similarity=0.226 Sum_probs=88.0
Q ss_pred eeeEEeeCCCCceEEEEEeec-----C-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcccc
Q 022960 22 RRRVVIPNSHGEKLVGILHET-----G-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYG 95 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~-----~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~ 95 (289)
-+...+.+.||.++...+... + .+..||++-|..|-.+- .+...=++.||.|+.++.||++.|.+.+...
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv----G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~ 289 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV----GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV 289 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe----eeecChHHhCceeeccCCCCccccCCCCCcc
Confidence 456778888998887765532 2 24577788887665432 1222334458999999999999999876543
Q ss_pred chHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCccc
Q 022960 96 NYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLK 154 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~ 154 (289)
+-. ..+.+++++..+. ..+.|++.|+|.||.-++.+|..+|+|+++|+-+.+-++-
T Consensus 290 n~~---nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDll 348 (517)
T KOG1553|consen 290 NTL---NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLL 348 (517)
T ss_pred cch---HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhh
Confidence 322 2233334433332 4568999999999999999999999999999988765543
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.1e-12 Score=98.52 Aligned_cols=95 Identities=22% Similarity=0.292 Sum_probs=73.9
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccC--CCCCCCc------cccchHHHHHHHHHHHHHHHhc-
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGN--GESEGSF------LYGNYRREAEDLRAIVQDFCAK- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~--G~s~~~~------~~~~~~~~~~d~~~~i~~l~~~- 114 (289)
..|.|++-||.|+.... +..+++.|++.||.|..+|.+|- |...... ....+.+...|+..++++|.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~--f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~ 147 (365)
T COG4188 70 LLPLVVLSHGSGSYVTG--FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLT 147 (365)
T ss_pred cCCeEEecCCCCCCccc--hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhh
Confidence 56899999999999876 88899999999999999999984 3332211 1112345568888888888665
Q ss_pred ---------CCceEEEEEeChhHHHHHHHHHhCCC
Q 022960 115 ---------GRVITAIIGHSKGGNAVLLYASKYND 140 (289)
Q Consensus 115 ---------~~~~~~l~G~S~Gg~~a~~~a~~~p~ 140 (289)
+..+|.++|||+||+.++.++....+
T Consensus 148 ~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 148 ASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 34689999999999999998876654
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.8e-10 Score=88.78 Aligned_cols=66 Identities=17% Similarity=0.183 Sum_probs=49.2
Q ss_pred ccCceEEEEEeCCCCccChhhHHHHHhhC-----CCcEEEEEcCCCcccccCchHHHHHHHHHHHhhcCCCCC
Q 022960 209 CQDCRVLTIHGTKDKMVPAEDALEFDKFI-----PNHKLHIIEGADHEFTSHQDELASLVIQFIKANYQKDGP 276 (289)
Q Consensus 209 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~~~~~ 276 (289)
..+.|+++.+|..|.++|+...+.+.+.+ .+++++.+++.+|.... ..-.....+||.+.+...+.
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~--~~~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA--FASAPDALAWLDDRFAGKPA 287 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh--hcCcHHHHHHHHHHHCCCCC
Confidence 34789999999999999998887766554 35678888999998421 12235577899998876543
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-10 Score=87.40 Aligned_cols=106 Identities=23% Similarity=0.237 Sum_probs=71.1
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHH--------cCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALER--------EGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~- 114 (289)
.+.+|||+||.+++... ++.+...+.+ ..++++++|+......- ....+.+..+.+.+.++.+.+.
T Consensus 3 ~g~pVlFIhG~~Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~---~g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF---HGRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCcccccc---ccccHHHHHHHHHHHHHHHHHhh
Confidence 56799999999998764 6666666522 14778999987543221 1112334444444444444322
Q ss_pred -----CCceEEEEEeChhHHHHHHHHHhCC---C-ccEEEEeccCCccc
Q 022960 115 -----GRVITAIIGHSKGGNAVLLYASKYN---D-ISIVINISGRFNLK 154 (289)
Q Consensus 115 -----~~~~~~l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~ 154 (289)
+.+++++|||||||.+|-.++...+ + |+.+|.++++....
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 5678999999999999988776543 3 99999998876544
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.9e-09 Score=89.48 Aligned_cols=118 Identities=16% Similarity=0.079 Sum_probs=82.3
Q ss_pred CceEEEEEeec----CCCcEEEEEcCCCCCCCCcchHHHH------------------HHHHHcCccEEEEccc-cCCCC
Q 022960 32 GEKLVGILHET----GSKQLVIVCHGFQSTKDRIPMVNLA------------------AALEREGISAFRFDFS-GNGES 88 (289)
Q Consensus 32 g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~~~~~~~~------------------~~l~~~G~~v~~~d~~-G~G~s 88 (289)
+..+.+++++. .+.|+||+++|++|.+.. +..+. -.+.+. .+++.+|.| |+|.|
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~--~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S 136 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM--FALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFS 136 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH--HhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcc
Confidence 56788887763 367999999999887732 21111 013333 689999976 88887
Q ss_pred CCCcc--ccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHhC---------CC--ccEEEEeccCC
Q 022960 89 EGSFL--YGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASKY---------ND--ISIVINISGRF 151 (289)
Q Consensus 89 ~~~~~--~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~---------p~--v~~~v~~~~~~ 151 (289)
..... ..+.++.++|+.++++.+.+. ...+++|+|+|+||..+..+|..- .. ++++++-+|+.
T Consensus 137 ~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 137 YADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 65322 234467789999998876543 346899999999999988877652 12 78999888865
Q ss_pred c
Q 022960 152 N 152 (289)
Q Consensus 152 ~ 152 (289)
+
T Consensus 217 d 217 (462)
T PTZ00472 217 D 217 (462)
T ss_pred C
Confidence 4
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-09 Score=83.97 Aligned_cols=114 Identities=20% Similarity=0.244 Sum_probs=85.1
Q ss_pred ceeeEEeeCCCCceEEEEEee---cCCCcEEEEEcCCCCCCCCcch-----HHHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 21 QRRRVVIPNSHGEKLVGILHE---TGSKQLVIVCHGFQSTKDRIPM-----VNLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~---~~~~~~iv~~hG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
..+++.+.. |+..+...... ..+...||++-|.++..+.... ..+.+.....|.+|+.+++||.|.|.+..
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~ 189 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP 189 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC
Confidence 456677765 78887765443 2367799999999887654110 22333334458999999999999999877
Q ss_pred cccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHhC
Q 022960 93 LYGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 93 ~~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
. ..+++.|..+.+++|+++ +.+++++.|||+||.++..++..+
T Consensus 190 s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 S---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred C---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 3 488899999999999864 347899999999999999865554
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.9e-10 Score=84.94 Aligned_cols=110 Identities=17% Similarity=0.142 Sum_probs=83.9
Q ss_pred CCceEEEEEeecC------CCcEEEEEcCCCCCCCCcchHHHHHHHHHc---C------ccEEEEccccCCCCCCCcc-c
Q 022960 31 HGEKLVGILHETG------SKQLVIVCHGFQSTKDRIPMVNLAAALERE---G------ISAFRFDFSGNGESEGSFL-Y 94 (289)
Q Consensus 31 ~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~---G------~~v~~~d~~G~G~s~~~~~-~ 94 (289)
.|.+++..-..+. .--+++++||++|+-. .+-.+++.|.+- | |.||++.+||+|-|+++.. .
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~--EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR--EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHH--HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 5777775433222 2248999999999984 477788888654 2 7799999999999997763 3
Q ss_pred cchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEE
Q 022960 95 GNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVI 145 (289)
Q Consensus 95 ~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v 145 (289)
.+..+.+.-+..++-.| +.+++.+-|--+|+.|+..+|..+|+ |.|+=
T Consensus 210 Fn~~a~ArvmrkLMlRL---g~nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 210 FNAAATARVMRKLMLRL---GYNKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred ccHHHHHHHHHHHHHHh---CcceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 34455566667777666 89999999999999999999999998 76543
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.3e-10 Score=91.94 Aligned_cols=242 Identities=17% Similarity=0.090 Sum_probs=145.3
Q ss_pred ccceeeEEeeCCCCceEEEEEeec------CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHET------GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~------~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
....+++.+++.||..+...+... +++|.+|+.+|.-+-.-...|..-...|.++|+.....|.||-|+-....
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~W 517 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQW 517 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccch
Confidence 456678889999999887665432 37888888887665443333544444556689999999999977654322
Q ss_pred ccc----chHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccch
Q 022960 93 LYG----NYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLG 164 (289)
Q Consensus 93 ~~~----~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~ 164 (289)
... .-....+|+.+.+++|.++ ..++..+.|.|.||.++..++..+|+ +.++|+-.|..+...-........
T Consensus 518 Hk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilpl 597 (712)
T KOG2237|consen 518 HKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPL 597 (712)
T ss_pred hhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCcccc
Confidence 111 1122358889999999888 45689999999999999999999999 999998888877655444443333
Q ss_pred hHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC-------
Q 022960 165 YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI------- 237 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~------- 237 (289)
+.......+... ....+.................-.-+|+..+.+|..|.+..+.++.+.+
T Consensus 598 t~sd~ee~g~p~------------~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~ 665 (712)
T KOG2237|consen 598 TTSDYEEWGNPE------------DFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDS 665 (712)
T ss_pred chhhhcccCChh------------hhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcc
Confidence 332222211111 0000011111111111111011235889999998776665544443332
Q ss_pred ----CCcEEEEEcCCCcccccCch---HHHHHHHHHHHhhcC
Q 022960 238 ----PNHKLHIIEGADHEFTSHQD---ELASLVIQFIKANYQ 272 (289)
Q Consensus 238 ----~~~~~~~~~~~gH~~~~~~~---~~~~~i~~fl~~~~~ 272 (289)
+..-+.+-.++||..-.... +-......||.+.+.
T Consensus 666 ~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 666 LKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLN 707 (712)
T ss_pred hhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhc
Confidence 12456677899998532222 223344567766554
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.1e-08 Score=73.34 Aligned_cols=219 Identities=17% Similarity=0.158 Sum_probs=121.5
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHc-C--ccEEEEccccCCCCC---CC------ccccchHHHHHHHHHHHHH
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALERE-G--ISAFRFDFSGNGESE---GS------FLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G--~~v~~~d~~G~G~s~---~~------~~~~~~~~~~~d~~~~i~~ 110 (289)
.+++.+++++|.+|.. .+|..+++.|... + ..++.+...||-.-+ .. .+..+++++++--.++++.
T Consensus 27 ~~~~li~~IpGNPG~~--gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLL--GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCceEEEEecCCCCch--hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 3788999999999998 5699999888765 2 458888888875443 11 1223444444444444433
Q ss_pred HHhcCCceEEEEEeChhHHHHHHHHHhC-CC--ccEEEEeccCCccc----ccc-------------------cccccch
Q 022960 111 FCAKGRVITAIIGHSKGGNAVLLYASKY-ND--ISIVINISGRFNLK----RGI-------------------EGRLGLG 164 (289)
Q Consensus 111 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~--v~~~v~~~~~~~~~----~~~-------------------~~~~~~~ 164 (289)
... ...+++++|||-|+++.+.+.... +. |.+++++-|....- .+. .-.....
T Consensus 105 ~~P-k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~ 183 (301)
T KOG3975|consen 105 YVP-KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPG 183 (301)
T ss_pred hCC-CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChH
Confidence 322 345899999999999999988743 33 77777776532110 000 0001111
Q ss_pred hHhhhhhcCcccccccc---cccccccC------------hhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhh
Q 022960 165 YLQRIKQNGFIDVRNKK---GKLEYRVT------------QESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED 229 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~---~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 229 (289)
+.+.+.-.......+.. ........ .+.+......+ ..... +-.+-+.+.+|..|.+||.+.
T Consensus 184 ~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d-~e~~e--en~d~l~Fyygt~DgW~p~~~ 260 (301)
T KOG3975|consen 184 FIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRD-IEYCE--ENLDSLWFYYGTNDGWVPSHY 260 (301)
T ss_pred HHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhH-HHHHH--hcCcEEEEEccCCCCCcchHH
Confidence 11111111110000000 00000000 01111111100 01111 114678899999999999999
Q ss_pred HHHHHhhCCCcEEEEE-cCCCcccc-cCchHHHHHHHHHH
Q 022960 230 ALEFDKFIPNHKLHII-EGADHEFT-SHQDELASLVIQFI 267 (289)
Q Consensus 230 ~~~~~~~~~~~~~~~~-~~~gH~~~-~~~~~~~~~i~~fl 267 (289)
...+.+.+|..++..- ++..|.|. .+.+.++..+.+.+
T Consensus 261 ~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 261 YDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 9999999986444332 67899976 45566777766654
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.3e-10 Score=85.71 Aligned_cols=100 Identities=23% Similarity=0.312 Sum_probs=59.8
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHcCcc---EEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEEE
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALEREGIS---AFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITAI 121 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l 121 (289)
.||||+||.+++... -|..+++.|.++||. |+++++-...............+.+..+.++|+.+.+. +. +|-|
T Consensus 2 ~PVVlVHG~~~~~~~-~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYS-NWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TTTTTCG-GCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCCcchhh-CHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 579999999985543 489999999999999 79999854333221111111123346778888777665 66 9999
Q ss_pred EEeChhHHHHHHHHHhCCCccEEEEe
Q 022960 122 IGHSKGGNAVLLYASKYNDISIVINI 147 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~v~~~v~~ 147 (289)
|||||||.++-.+......++..+.+
T Consensus 80 VgHS~G~~iaR~yi~~~~~~d~~~~l 105 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKGGGGADKVVNL 105 (219)
T ss_dssp EEETCHHHHHHHHHHHCTGGGTEEE-
T ss_pred EEcCCcCHHHHHHHHHcCCCCcccCc
Confidence 99999999998887654224433333
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.9e-08 Score=77.35 Aligned_cols=183 Identities=14% Similarity=0.136 Sum_probs=120.2
Q ss_pred CCcEEEEEcCCCCCCCC-cchHHHHHHHHHcCccEEEEcccc--CCCCC--------------CCcc-c-----------
Q 022960 44 SKQLVIVCHGFQSTKDR-IPMVNLAAALEREGISAFRFDFSG--NGESE--------------GSFL-Y----------- 94 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G--~G~s~--------------~~~~-~----------- 94 (289)
...+||++||.+.+.+. .....+.+.|.+.|+..+.+.+|. ..... .... .
T Consensus 86 ~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 165 (310)
T PF12048_consen 86 PQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQE 165 (310)
T ss_pred CceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccH
Confidence 46699999999998753 346678888899999999998886 11000 0000 0
Q ss_pred -----cchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC--ccEEEEeccCCcccccccccccchhHh
Q 022960 95 -----GNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--ISIVINISGRFNLKRGIEGRLGLGYLQ 167 (289)
Q Consensus 95 -----~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~~~~~~~~~~ 167 (289)
..-.....-+.+++.++.+++..+++|+||+.|+..++.+....+. ++++|++++....... ...+.
T Consensus 166 ~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~-----n~~l~- 239 (310)
T PF12048_consen 166 AEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDR-----NPALA- 239 (310)
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchh-----hhhHH-
Confidence 0112334667788888887777789999999999999999998876 8999999985443211 00000
Q ss_pred hhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhH---HHHHhhC--CCcEE
Q 022960 168 RIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDA---LEFDKFI--PNHKL 242 (289)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~---~~~~~~~--~~~~~ 242 (289)
+ ... .+++|||=|++.+...+ ...+ +.+.++. ++.+-
T Consensus 240 ---------------------------~--------~la--~l~iPvLDi~~~~~~~~-~~~a~~R~~~a~r~~~~~YrQ 281 (310)
T PF12048_consen 240 ---------------------------E--------QLA--QLKIPVLDIYSADNPAS-QQTAKQRKQAAKRNKKPDYRQ 281 (310)
T ss_pred ---------------------------H--------Hhh--ccCCCEEEEecCCChHH-HHHHHHHHHHHHhccCCCcee
Confidence 0 001 23789999998884332 2211 1222332 34566
Q ss_pred EEEcCCCcccccCchHHHHHHHHHHHhh
Q 022960 243 HIIEGADHEFTSHQDELASLVIQFIKAN 270 (289)
Q Consensus 243 ~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 270 (289)
..+.+..|......+.+.+.|..||+.+
T Consensus 282 ~~L~~~~~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 282 IQLPGLPDNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred EecCCCCCChhhHHHHHHHHHHHHHHhh
Confidence 6677766765444455999999999864
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-09 Score=89.23 Aligned_cols=180 Identities=22% Similarity=0.242 Sum_probs=113.0
Q ss_pred CCcEEEEEcCCC-CCCCCcchHHHHHHHHHcC--ccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-----C
Q 022960 44 SKQLVIVCHGFQ-STKDRIPMVNLAAALEREG--ISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-----G 115 (289)
Q Consensus 44 ~~~~iv~~hG~~-~~~~~~~~~~~~~~l~~~G--~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-----~ 115 (289)
..|.++++||.+ ....+..+..+...|...| ..+-.+|++.-- ...+....++.+..+.++...+ .
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~i------gG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPI------GGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCC------CCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 357889999988 2221111223333443333 456677776311 1123444455555555533222 4
Q ss_pred CceEEEEEeChhHHHHHHHHHhCCC--ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhh
Q 022960 116 RVITAIIGHSKGGNAVLLYASKYND--ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESL 193 (289)
Q Consensus 116 ~~~~~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (289)
..+|+|+|.|||+.++......+.+ |+++|+++-+++....-.... .+.
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgir----------------------------DE~- 299 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGIR----------------------------DEA- 299 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCCc----------------------------chh-
Confidence 5589999999999988888777765 899998876554332211000 001
Q ss_pred hhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC-CcEEEEEcCCCccccc-----C-----chHHHHH
Q 022960 194 MDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP-NHKLHIIEGADHEFTS-----H-----QDELASL 262 (289)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-----~-----~~~~~~~ 262 (289)
...++.|+|||.|.+|..++++..+.+.+++. ..+++++.+++|.+-. + ..++...
T Consensus 300 -------------Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~ 366 (784)
T KOG3253|consen 300 -------------LLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSA 366 (784)
T ss_pred -------------hHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHH
Confidence 11337899999999999999999999999885 4799999999999531 1 2345555
Q ss_pred HHHHHHhhc
Q 022960 263 VIQFIKANY 271 (289)
Q Consensus 263 i~~fl~~~~ 271 (289)
+.+||.+..
T Consensus 367 i~~aI~efv 375 (784)
T KOG3253|consen 367 IAQAIKEFV 375 (784)
T ss_pred HHHHHHHHH
Confidence 555555544
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.7e-09 Score=78.49 Aligned_cols=230 Identities=11% Similarity=0.109 Sum_probs=125.4
Q ss_pred EeecCCCcEEEEEcCCCCCCCCcchH-HHHHHHHHcCccEEEEccccCCCCCCCccccchHHHH-----------HHHHH
Q 022960 39 LHETGSKQLVIVCHGFQSTKDRIPMV-NLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREA-----------EDLRA 106 (289)
Q Consensus 39 ~~~~~~~~~iv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~-----------~d~~~ 106 (289)
+.+.+.++..+.+-|-|.+.- .-+ .+...+.++|...+.++-|-+|....+......-..+ ++...
T Consensus 107 liPQK~~~KOG~~a~tgdh~y--~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~ 184 (371)
T KOG1551|consen 107 LIPQKMADLCLSWALTGDHVY--TRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVK 184 (371)
T ss_pred ecccCcCCeeEEEeecCCcee--EeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 334445666666666666541 111 3556677788999999999999876543322111112 22223
Q ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc--hhHhhhhhc-Cccccccccc
Q 022960 107 IVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL--GYLQRIKQN-GFIDVRNKKG 182 (289)
Q Consensus 107 ~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~ 182 (289)
++.|-...+..++.++|-||||.+|..+...++. |.-+=++++.-.........+.. ...+++... .+.....+..
T Consensus 185 lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p 264 (371)
T KOG1551|consen 185 LFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRNP 264 (371)
T ss_pred hcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhCc
Confidence 3333222367899999999999999998888777 55444444321111111111111 111111111 0111111111
Q ss_pred ccccccC--------hhhhhhhhccchh--hhhccc--ccC-ceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCC
Q 022960 183 KLEYRVT--------QESLMDRLSTDIH--AACHMI--CQD-CRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGAD 249 (289)
Q Consensus 183 ~~~~~~~--------~~~~~~~~~~~~~--~~~~~~--~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g 249 (289)
...+... .......+..-.. ...... +++ --+.++.+++|..+|......+.+.+|++++..++ +|
T Consensus 265 ~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gG 343 (371)
T KOG1551|consen 265 AQSYHLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GG 343 (371)
T ss_pred hhhHHHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCCCEEEEee-cC
Confidence 1111000 0111111110000 001111 112 23677789999999999999999999999999999 59
Q ss_pred cc--cccCchHHHHHHHHHHHhhc
Q 022960 250 HE--FTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 250 H~--~~~~~~~~~~~i~~fl~~~~ 271 (289)
|. +....+.+-+.|.+-|++.-
T Consensus 344 HVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 344 HVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred ceeeeehhchHHHHHHHHHHHhhh
Confidence 98 45677889999999888654
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.1e-10 Score=89.62 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=69.1
Q ss_pred CCcEEEEEcCCCCCC-CCcchHHHHHHHHH---cCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc---CC
Q 022960 44 SKQLVIVCHGFQSTK-DRIPMVNLAAALER---EGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK---GR 116 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~-~~~~~~~~~~~l~~---~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~ 116 (289)
++|++|++||+.++. .......+.+.+.+ .+++|+++|+...-...-.............+..+|..|... ..
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 689999999999988 43335556665544 479999999974322110001112233446667777777633 67
Q ss_pred ceEEEEEeChhHHHHHHHHHhCCC---ccEEEEeccCCc
Q 022960 117 VITAIIGHSKGGNAVLLYASKYND---ISIVINISGRFN 152 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~ 152 (289)
++++|||||+||.+|-.++..... |..+..++|...
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 799999999999999998887654 999999987543
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=99.10 E-value=3e-09 Score=83.92 Aligned_cols=106 Identities=23% Similarity=0.219 Sum_probs=74.4
Q ss_pred CCcEEEEEcCCCCCCCC-----cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHH-hcCCc
Q 022960 44 SKQLVIVCHGFQSTKDR-----IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFC-AKGRV 117 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~-----~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~-~~~~~ 117 (289)
+.|+||++||+|..-.. .+...+...|. ...++++|+.-.... .....+..+..++.+..++|. ..+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~---~~~~~yPtQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSD---EHGHKYPTQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccc---cCCCcCchHHHHHHHHHHHHHhccCCC
Confidence 46999999999865432 01222333333 358888888743200 123345677788888888887 55888
Q ss_pred eEEEEEeChhHHHHHHHHHhC----C--CccEEEEeccCCccc
Q 022960 118 ITAIIGHSKGGNAVLLYASKY----N--DISIVINISGRFNLK 154 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~~----p--~v~~~v~~~~~~~~~ 154 (289)
+++|+|-|.||.+++.++... + -.+++|+++|+....
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999999887643 1 168999999998765
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.4e-10 Score=91.27 Aligned_cols=91 Identities=20% Similarity=0.199 Sum_probs=73.6
Q ss_pred cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCC
Q 022960 61 IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYN 139 (289)
Q Consensus 61 ~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p 139 (289)
++|..+++.|.+.||.+ ..|++|+|.+.+.. ...++..+++.++++.+.+. +.++++|+||||||.++..++..+|
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~--~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS--NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCcccc--ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 46999999999999765 78999999987653 22455678888888877654 6779999999999999999998887
Q ss_pred C-----ccEEEEeccCCccc
Q 022960 140 D-----ISIVINISGRFNLK 154 (289)
Q Consensus 140 ~-----v~~~v~~~~~~~~~ 154 (289)
+ |+++|.+++++.-.
T Consensus 185 ~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HhHHhHhccEEEECCCCCCC
Confidence 5 79999998876543
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=9.9e-08 Score=78.09 Aligned_cols=119 Identities=20% Similarity=0.223 Sum_probs=69.4
Q ss_pred CceEEEEEeecC-----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCcc----EEEEccccCC-CCCCCccccchHH-H
Q 022960 32 GEKLVGILHETG-----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGIS----AFRFDFSGNG-ESEGSFLYGNYRR-E 100 (289)
Q Consensus 32 g~~l~~~~~~~~-----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~----v~~~d~~G~G-~s~~~~~~~~~~~-~ 100 (289)
|.+..++++.|. +.|+|+++||....... ......+.|.+.|.. ++.+|..+.. ++........+.+ .
T Consensus 191 g~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~-~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l 269 (411)
T PRK10439 191 GNSRRVWIYTTGDAAPEERPLAILLDGQFWAESM-PVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAV 269 (411)
T ss_pred CCceEEEEEECCCCCCCCCCEEEEEECHHhhhcC-CHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHH
Confidence 444444455442 46899999996533221 234455666666633 5677753211 1111111111221 2
Q ss_pred HHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 101 AEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 101 ~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
.+++.-.|+..-.. +.++.+|.|+||||..|+.++.++|+ +.+++.++|.+
T Consensus 270 ~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 270 QQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 23443333332111 45678999999999999999999999 99999999864
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.1e-08 Score=78.53 Aligned_cols=211 Identities=18% Similarity=0.173 Sum_probs=118.0
Q ss_pred CceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEE--EccccCCCCCC----------------
Q 022960 32 GEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFR--FDFSGNGESEG---------------- 90 (289)
Q Consensus 32 g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~--~d~~G~G~s~~---------------- 90 (289)
..+|.+++.-.+ .+..|+++.|+|++....++..+.+.+++. |.|++ +++-++|....
T Consensus 19 ~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~-fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk 97 (403)
T PF11144_consen 19 ESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKK-FNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILK 97 (403)
T ss_pred cceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHh-CCEEEEEeeeeheeeccccCchhcCCHHHHHHHH
Confidence 345666553222 456889999999999876778888889887 66554 56666553210
Q ss_pred -------C--------------------------------------------ccccchH----HHHHHHHHHHHHHHhc-
Q 022960 91 -------S--------------------------------------------FLYGNYR----REAEDLRAIVQDFCAK- 114 (289)
Q Consensus 91 -------~--------------------------------------------~~~~~~~----~~~~d~~~~i~~l~~~- 114 (289)
- +....|. -.+-|+..++.++...
T Consensus 98 ~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~ 177 (403)
T PF11144_consen 98 KSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIF 177 (403)
T ss_pred HHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 0 0000010 1134555556555554
Q ss_pred ---C-CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhH--hhhhhcCc------------c
Q 022960 115 ---G-RVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYL--QRIKQNGF------------I 175 (289)
Q Consensus 115 ---~-~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------------~ 175 (289)
+ .-+++++|+|.||++|...|.-.|. +++++=-+++....... .++++.. +......+ .
T Consensus 178 ~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~--I~Gre~~~~~y~~~~~~~~~~~~~i~~~~K 255 (403)
T PF11144_consen 178 PKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRY--IFGREIDFMKYICSGEFFNFKNIRIYCFDK 255 (403)
T ss_pred hcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhhe--eeeeecCcccccccccccccCCEEEEEEec
Confidence 2 2389999999999999999999999 88888766654422111 1221111 00000000 0
Q ss_pred cccccccccccccC--hhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEE
Q 022960 176 DVRNKKGKLEYRVT--QESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHII 245 (289)
Q Consensus 176 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~ 245 (289)
..+.......+.++ ....+..+..+..........++-.+..|+..|..+|.+.-+.+.+.+. +++++.+
T Consensus 256 t~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lI 331 (403)
T PF11144_consen 256 TFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLI 331 (403)
T ss_pred cccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 00111111111111 2223333333333333322235567778999999999998888777664 5788877
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.4e-09 Score=82.06 Aligned_cols=100 Identities=15% Similarity=0.174 Sum_probs=81.0
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeC
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S 125 (289)
|+++++|+.+|... .|..+...|... ..|+.++.||.+.. .....+++++++...+.|..++.. .++.|+|||
T Consensus 1 ~pLF~fhp~~G~~~--~~~~L~~~l~~~-~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP~--GPy~L~G~S 73 (257)
T COG3319 1 PPLFCFHPAGGSVL--AYAPLAAALGPL-LPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQPE--GPYVLLGWS 73 (257)
T ss_pred CCEEEEcCCCCcHH--HHHHHHHHhccC-ceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCCC--CCEEEEeec
Confidence 57999999999984 499999999987 99999999999863 233456677777777777766443 389999999
Q ss_pred hhHHHHHHHHHhC---CC-ccEEEEeccCCc
Q 022960 126 KGGNAVLLYASKY---ND-ISIVINISGRFN 152 (289)
Q Consensus 126 ~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~ 152 (289)
+||.+|..+|.+. .+ |..+++++++..
T Consensus 74 ~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 74 LGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999998864 33 999999998766
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.8e-09 Score=79.12 Aligned_cols=106 Identities=15% Similarity=0.215 Sum_probs=74.8
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCC------C---C---------------cc-----c
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESE------G---S---------------FL-----Y 94 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~------~---~---------------~~-----~ 94 (289)
+-|++||-||++++.. +|..+.-.|+++||.|.+++.|-+..+. . . .. .
T Consensus 117 k~PvvvFSHGLggsRt--~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRT--LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CccEEEEecccccchh--hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 4589999999999985 5999999999999999999999765431 0 0 00 0
Q ss_pred cchHHHHHHHHHHHHHHHhc------------------------CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccC
Q 022960 95 GNYRREAEDLRAIVQDFCAK------------------------GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGR 150 (289)
Q Consensus 95 ~~~~~~~~d~~~~i~~l~~~------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~ 150 (289)
.....-+.++..+++-+++. +-.++.++|||+||..++...+.+.+++..|+++++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~W 274 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeee
Confidence 01112234444444443332 224689999999999999888877778888888875
Q ss_pred C
Q 022960 151 F 151 (289)
Q Consensus 151 ~ 151 (289)
.
T Consensus 275 M 275 (399)
T KOG3847|consen 275 M 275 (399)
T ss_pred e
Confidence 4
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.5e-08 Score=78.18 Aligned_cols=49 Identities=31% Similarity=0.387 Sum_probs=38.5
Q ss_pred HHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 106 AIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 106 ~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
+++.++.++ ...+..|+|+||||..|+.++.++|+ +.++++++|.+...
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 444455444 22238999999999999999999999 99999999876654
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.9e-07 Score=74.76 Aligned_cols=84 Identities=15% Similarity=0.203 Sum_probs=56.5
Q ss_pred HHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-c
Q 022960 65 NLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-I 141 (289)
Q Consensus 65 ~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v 141 (289)
.+...|.. |+.|+.+.+.- .+....++.+...-...+++.+... +..+.+|+|-|.||+.++.+|+.+|+ +
T Consensus 92 evG~AL~~-GHPvYFV~F~p-----~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 92 EVGVALRA-GHPVYFVGFFP-----EPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHHHc-CCCeEEEEecC-----CCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 34455544 89998887651 1222334555555555566665554 33489999999999999999999999 7
Q ss_pred cEEEEeccCCccc
Q 022960 142 SIVINISGRFNLK 154 (289)
Q Consensus 142 ~~~v~~~~~~~~~ 154 (289)
.-+|+.+++.+..
T Consensus 166 gplvlaGaPlsyw 178 (581)
T PF11339_consen 166 GPLVLAGAPLSYW 178 (581)
T ss_pred CceeecCCCcccc
Confidence 7777666655443
|
Their function is unknown. |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=8.7e-08 Score=79.80 Aligned_cols=225 Identities=16% Similarity=0.042 Sum_probs=133.9
Q ss_pred ccceeeEEeeCCCCceEEEEEe-e-----cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILH-E-----TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~-~-----~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
....+.+..+..||.++...+. . .++.|++++--|.-|......+....-.|.++|+.....-.||-|+-....
T Consensus 416 ~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~W 495 (682)
T COG1770 416 DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAW 495 (682)
T ss_pred HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHH
Confidence 4566777888889988776532 2 347788888777666554434555555677889877777788877654321
Q ss_pred cc----cchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccch
Q 022960 93 LY----GNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLG 164 (289)
Q Consensus 93 ~~----~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~ 164 (289)
.. ..-.....|+.++.++|.++ ..++++++|-|.||+++...+...|+ ++++|+-.|+.+.-..+.......
T Consensus 496 Ye~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPL 575 (682)
T COG1770 496 YEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPL 575 (682)
T ss_pred HHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCC
Confidence 10 01112247888888888777 45589999999999999999999999 999999999877654333221111
Q ss_pred hHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----Cc
Q 022960 165 YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NH 240 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~ 240 (289)
-.. .+..+-+ ...++...-....+....... +--.|+|++.|..|+.|..-...++.+++. +.
T Consensus 576 T~~-----E~~EWGN-------P~d~e~y~yikSYSPYdNV~a-~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~ 642 (682)
T COG1770 576 TVT-----EWDEWGN-------PLDPEYYDYIKSYSPYDNVEA-QPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDG 642 (682)
T ss_pred Ccc-----chhhhCC-------cCCHHHHHHHhhcCchhcccc-CCCCceEEEccccCCccccchHHHHHHHHhhcccCC
Confidence 000 0111111 111122111112222222222 224689999999999887544444443332 22
Q ss_pred --E-EEEEcCCCcccccCc
Q 022960 241 --K-LHIIEGADHEFTSHQ 256 (289)
Q Consensus 241 --~-~~~~~~~gH~~~~~~ 256 (289)
- +..=-++||.-....
T Consensus 643 ~plLlkt~M~aGHgG~SgR 661 (682)
T COG1770 643 NPLLLKTNMDAGHGGASGR 661 (682)
T ss_pred CcEEEEecccccCCCCCCc
Confidence 2 222245899754333
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.8e-08 Score=79.92 Aligned_cols=121 Identities=21% Similarity=0.166 Sum_probs=78.5
Q ss_pred CCCceEEEEEeec----CCCcEEEEEcCCCCCCCCcchHHHHH-------------------HHHHcCccEEEEccc-cC
Q 022960 30 SHGEKLVGILHET----GSKQLVIVCHGFQSTKDRIPMVNLAA-------------------ALEREGISAFRFDFS-GN 85 (289)
Q Consensus 30 ~~g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~~~~~~~~~-------------------~l~~~G~~v~~~d~~-G~ 85 (289)
..+..+.+++++. .+.|+||++.|++|++.. +..+.+ .+.+. .+++.+|.| |.
T Consensus 21 ~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~--~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvGt 97 (415)
T PF00450_consen 21 NENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM--WGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVGT 97 (415)
T ss_dssp TTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH--HHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STTS
T ss_pred CCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc--cccccccCceEEeecccccccccccccccc-cceEEEeecCce
Confidence 3677888888764 378999999999987742 322211 12232 679999966 88
Q ss_pred CCCCCCccc---cchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHh----C-----CC--ccEEEEe
Q 022960 86 GESEGSFLY---GNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASK----Y-----ND--ISIVINI 147 (289)
Q Consensus 86 G~s~~~~~~---~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~--v~~~v~~ 147 (289)
|-|...... .+.++.++|+..+|..+-.. ...+++|.|-|+||..+..+|.. . +. ++++++.
T Consensus 98 GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IG 177 (415)
T PF00450_consen 98 GFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIG 177 (415)
T ss_dssp TT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEE
T ss_pred EEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceec
Confidence 888655433 25577788888888766554 34489999999999887666653 2 13 8999999
Q ss_pred ccCCcc
Q 022960 148 SGRFNL 153 (289)
Q Consensus 148 ~~~~~~ 153 (289)
+|..+.
T Consensus 178 ng~~dp 183 (415)
T PF00450_consen 178 NGWIDP 183 (415)
T ss_dssp SE-SBH
T ss_pred Cccccc
Confidence 987654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.5e-07 Score=67.75 Aligned_cols=108 Identities=15% Similarity=0.192 Sum_probs=79.5
Q ss_pred CCcEEEEEcCCCCCCCC-cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcC-CceEEE
Q 022960 44 SKQLVIVCHGFQSTKDR-IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKG-RVITAI 121 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~l 121 (289)
.+..|||+-|++..--. .+...+...|.+.+|.++-+.++.+-.. ....++.+.++|+..+++++...+ -..|+|
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G---~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNG---YGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccc---cccccccccHHHHHHHHHHhhccCcccceEE
Confidence 34678999998865322 3567889999999999999887732111 123355667899999999886553 348999
Q ss_pred EEeChhHHHHHHHHHhC--CC-ccEEEEeccCCccc
Q 022960 122 IGHSKGGNAVLLYASKY--ND-ISIVINISGRFNLK 154 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~~~ 154 (289)
+|||.|+.-.+.++... ++ +.+.|+.+|..+..
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999988887332 45 88899999877654
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-07 Score=63.95 Aligned_cols=185 Identities=18% Similarity=0.218 Sum_probs=99.7
Q ss_pred EEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeChh
Q 022960 48 VIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKG 127 (289)
Q Consensus 48 iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~G 127 (289)
||++||+.++..+..-..+.+.+... ...+ +.+... ...+....++.+..++... +.+...++|.|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i-------~y~~p~-l~h~p~~a~~ele~~i~~~---~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDI-------EYSTPH-LPHDPQQALKELEKAVQEL---GDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccce-------eeecCC-CCCCHHHHHHHHHHHHHHc---CCCCceEEeecch
Confidence 89999999987662222233444433 2222 222211 1224466677788887766 4445899999999
Q ss_pred HHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcc
Q 022960 128 GNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHM 207 (289)
Q Consensus 128 g~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (289)
|+.|.+++.++. +++++ ++|.....+.+...+++.- +......+......+...-......
T Consensus 70 GY~At~l~~~~G-irav~-~NPav~P~e~l~gylg~~e-------------n~ytg~~y~le~~hI~~l~~~~~~~---- 130 (191)
T COG3150 70 GYYATWLGFLCG-IRAVV-FNPAVRPYELLTGYLGRPE-------------NPYTGQEYVLESRHIATLCVLQFRE---- 130 (191)
T ss_pred HHHHHHHHHHhC-Chhhh-cCCCcCchhhhhhhcCCCC-------------CCCCcceEEeehhhHHHHHHhhccc----
Confidence 999999988763 55544 5676554444333322111 0001111111222221111111111
Q ss_pred cccCceEEEEEeCC-CCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHH
Q 022960 208 ICQDCRVLTIHGTK-DKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIK 268 (289)
Q Consensus 208 ~~~~~P~l~i~g~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 268 (289)
.+ +...+++.... |++.+... ..+.++.+...+.+|+.|.|. .-+...+.|..|+.
T Consensus 131 l~-~p~~~~lL~qtgDEvLDyr~---a~a~y~~~~~~V~dgg~H~F~-~f~~~l~~i~aF~g 187 (191)
T COG3150 131 LN-RPRCLVLLSQTGDEVLDYRQ---AVAYYHPCYEIVWDGGDHKFK-GFSRHLQRIKAFKG 187 (191)
T ss_pred cC-CCcEEEeecccccHHHHHHH---HHHHhhhhhheeecCCCcccc-chHHhHHHHHHHhc
Confidence 10 22345555555 88765444 445556778888899889874 23556677777763
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.7e-07 Score=70.12 Aligned_cols=85 Identities=21% Similarity=0.156 Sum_probs=59.3
Q ss_pred chHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC---
Q 022960 62 PMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY--- 138 (289)
Q Consensus 62 ~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~--- 138 (289)
.|..+...|... +.|+.++.+|++.+.... .+++..++.+...+... ....+++++|||+||.++..++...
T Consensus 14 ~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 14 EYARLAAALRGR-RDVSALPLPGFGPGEPLP--ASADALVEAQAEAVLRA--AGGRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred HHHHHHHhcCCC-ccEEEecCCCCCCCCCCC--CCHHHHHHHHHHHHHHh--cCCCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 488888888764 899999999998654332 23444454444433322 1345799999999999998888763
Q ss_pred CC-ccEEEEeccCC
Q 022960 139 ND-ISIVINISGRF 151 (289)
Q Consensus 139 p~-v~~~v~~~~~~ 151 (289)
+. +.+++++++..
T Consensus 89 ~~~~~~l~~~~~~~ 102 (212)
T smart00824 89 GIPPAAVVLLDTYP 102 (212)
T ss_pred CCCCcEEEEEccCC
Confidence 34 88888876543
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.7e-08 Score=72.96 Aligned_cols=110 Identities=18% Similarity=0.278 Sum_probs=74.8
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCc--cEEEEccccCCCCCCCc-cccchHHHHHHHHHHHHHHHhc-CCce
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGI--SAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQDFCAK-GRVI 118 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~-~~~~ 118 (289)
+++.++||+||+..+.+. -....++.....|+ .++.+.||+.|.-..-. ...+.......+.++++.|.+. +..+
T Consensus 16 ~~~~vlvfVHGyn~~f~~-a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFED-ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCCCCHHH-HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 467899999999988653 12333333333344 69999999887632211 1122233457788888888777 7889
Q ss_pred EEEEEeChhHHHHHHHHHhC----C-----C-ccEEEEeccCCcc
Q 022960 119 TAIIGHSKGGNAVLLYASKY----N-----D-ISIVINISGRFNL 153 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~----p-----~-v~~~v~~~~~~~~ 153 (289)
|+|++||||+.+.+...... + . +..+|+++|-.+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999998876542 1 2 6788888875543
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.8e-07 Score=73.38 Aligned_cols=180 Identities=21% Similarity=0.281 Sum_probs=109.7
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITAII 122 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~ 122 (289)
+...-||+.|-|+..+ .-+.+.+.|.++|+.|+.+|-.-|-.+. .+.++.+.|+..++++...+ +..++.|+
T Consensus 259 sd~~av~~SGDGGWr~--lDk~v~~~l~~~gvpVvGvdsLRYfW~~-----rtPe~~a~Dl~r~i~~y~~~w~~~~~~li 331 (456)
T COG3946 259 SDTVAVFYSGDGGWRD--LDKEVAEALQKQGVPVVGVDSLRYFWSE-----RTPEQIAADLSRLIRFYARRWGAKRVLLI 331 (456)
T ss_pred cceEEEEEecCCchhh--hhHHHHHHHHHCCCceeeeehhhhhhcc-----CCHHHHHHHHHHHHHHHHHhhCcceEEEE
Confidence 3456678888777664 3678899999999999999965433333 24477889999999998776 78899999
Q ss_pred EeChhHHHHHHHHHhCCC-----ccEEEEec--cCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhh
Q 022960 123 GHSKGGNAVLLYASKYND-----ISIVINIS--GRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMD 195 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~-----v~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (289)
|+|+|+-+.-....+.|. |+.+.+++ -..++.-.+..++...- +.
T Consensus 332 GySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~gWlg~~~-------------------------~g--- 383 (456)
T COG3946 332 GYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVEGWLGMAG-------------------------EG--- 383 (456)
T ss_pred eecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEeeeeccCC-------------------------cC---
Confidence 999999887776666553 33222222 11111111111111000 00
Q ss_pred hhccchhhhhcccccCceEEEEEeCCCC--ccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHh
Q 022960 196 RLSTDIHAACHMICQDCRVLTIHGTKDK--MVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 196 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~--~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
..+.......+. ...+.+|+|.+|+ .+|... .++.+.+.+|| ||.|-++-+.+++.|++=++.
T Consensus 384 --~~~~~~~~~~l~-~~~v~CiYG~~e~d~~Cp~l~-------~~~~~~v~lpG-gHHFd~dy~~la~~il~~~~~ 448 (456)
T COG3946 384 --AGDVVPDIAKLP-LARVQCIYGQEEKDTACPSLK-------AKGVDTVKLPG-GHHFDGDYEKLAKAILQGMRL 448 (456)
T ss_pred --CCCcchhhhhCC-cceeEEEecCccccccCCcch-------hhcceeEecCC-CcccCccHHHHHHHHHHHHHh
Confidence 001111111111 3468889998765 333222 23678899997 666666677778877776643
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.76 E-value=5e-08 Score=74.56 Aligned_cols=209 Identities=12% Similarity=0.067 Sum_probs=110.4
Q ss_pred EEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc---CCceEEEEE
Q 022960 47 LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK---GRVITAIIG 123 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G 123 (289)
++|++=|+.+.... ...+..+...+.|+.++.+-.+-....... ......+..+++.+.+. +..++.+-.
T Consensus 1 plvvl~gW~gA~~~-hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWMGAKPK-HLAKYSDLYQDPGFDILLVTSPPADFFWPS------KRLAPAADKLLELLSDSQSASPPPILFHS 73 (240)
T ss_pred CEEEEEeCCCCCHH-HHHHHHHHHHhcCCeEEEEeCCHHHHeeec------cchHHHHHHHHHHhhhhccCCCCCEEEEE
Confidence 46677788876643 355566666668999998876521111000 12223333344444433 223899999
Q ss_pred eChhHHHHHHHHHh-----------CCCccEEEEeccCCcccc-cccccccchhHhhhhhcC---------cccc-cccc
Q 022960 124 HSKGGNAVLLYASK-----------YNDISIVINISGRFNLKR-GIEGRLGLGYLQRIKQNG---------FIDV-RNKK 181 (289)
Q Consensus 124 ~S~Gg~~a~~~a~~-----------~p~v~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~-~~~~ 181 (289)
+|.||...+..... .|.++++|+-+++..... ..... +...+.... .... ....
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARA----FSAALPKSSPRWFVPLWPLLQFLLRLS 149 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHH----HHHHcCccchhhHHHHHHHHHHHHHHH
Confidence 99988776665441 123788887776533221 00000 000000000 0000 0000
Q ss_pred cccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcccc--cC
Q 022960 182 GKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEFT--SH 255 (289)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~--~~ 255 (289)
................ .............+|-|+++++.|.+++.+..+++.+... +++...++++.|.-+ .+
T Consensus 150 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~ 228 (240)
T PF05705_consen 150 IISYFIFGYPDVQEYY-RRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKH 228 (240)
T ss_pred HHHHHHhcCCcHHHHH-HHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccC
Confidence 0000000000000000 0011112222447899999999999999998887765543 378888899999955 67
Q ss_pred chHHHHHHHHHH
Q 022960 256 QDELASLVIQFI 267 (289)
Q Consensus 256 ~~~~~~~i~~fl 267 (289)
++++.+.+.+|+
T Consensus 229 p~~Y~~~v~~fw 240 (240)
T PF05705_consen 229 PDRYWRAVDEFW 240 (240)
T ss_pred HHHHHHHHHhhC
Confidence 889999998874
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.1e-07 Score=77.60 Aligned_cols=110 Identities=15% Similarity=0.096 Sum_probs=72.1
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCCc-------cccchHHHHHHHHHHHHHHHhc-
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGSF-------LYGNYRREAEDLRAIVQDFCAK- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~d~~~~i~~l~~~- 114 (289)
.+|++|++-|=+.-...+....+...|+++ |-.++.++.|.+|.|.+.. ...+.++..+|+..++++++.+
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 377777775543322111223355566665 7889999999999997432 2346688889999999999854
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcc
Q 022960 115 ---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNL 153 (289)
Q Consensus 115 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~ 153 (289)
...+++++|-|+||.+|..+-.++|+ |.+.+.-++++..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 33489999999999999999999999 8999988876643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.1e-07 Score=80.66 Aligned_cols=106 Identities=20% Similarity=0.157 Sum_probs=69.6
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc-C-ccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc---
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE-G-ISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK--- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G-~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--- 114 (289)
+.|+||++||++....+.... ....|+.. + +.|+.+++| |+.......... ..-..|...+++|++++
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~--n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPG--NYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCCCCCc--chhHHHHHHHHHHHHHHHHH
Confidence 468999999976433221111 23445544 3 899999999 333332211111 12256888888888765
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCc
Q 022960 115 ---GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRFN 152 (289)
Q Consensus 115 ---~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 152 (289)
+.++|.|+|+|.||..+..++... +. ++++|+.++...
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 567999999999999998877763 23 888898887554
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.6e-07 Score=70.39 Aligned_cols=90 Identities=21% Similarity=0.205 Sum_probs=49.1
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccCCCCCCCccccchHHHHHHHHHH-HHHHHhcC--Cce
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI-VQDFCAKG--RVI 118 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~-i~~l~~~~--~~~ 118 (289)
+.-.||++||+.++..+ |..+...+... .+.-..+...++..... ....+.+..++.+.+- .+.+.... ..+
T Consensus 3 ~~hLvV~vHGL~G~~~d--~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~-~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPAD--MRYLKNHLEKIPEDLPNARIVVLGYSNNEF-KTFDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHHH--HHHHHHHHHHhhhhcchhhhhhhccccccc-ccchhhHHHHHHHHHHHHHhcccccccccc
Confidence 34589999999999865 77777777661 12111222222211111 1122334444433322 22222222 358
Q ss_pred EEEEEeChhHHHHHHHHH
Q 022960 119 TAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~ 136 (289)
+.+|||||||.++-.+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999999876554
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.2e-06 Score=69.15 Aligned_cols=222 Identities=18% Similarity=0.130 Sum_probs=116.4
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCC----------CCCccccc---hHHHHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGES----------EGSFLYGN---YRREAEDLRAIVQD 110 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s----------~~~~~~~~---~~~~~~d~~~~i~~ 110 (289)
+-|.+++.||+++..+. .......++..++.++..+...+|.+ ........ +......+...-..
T Consensus 48 ~~p~v~~~h~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQ--SLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYR 125 (299)
T ss_pred cCceEEeccCccccccC--cchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHH
Confidence 46789999999999875 33377788888888777765222222 11110000 00000111111111
Q ss_pred HHhcCCceEEEEEeChhHHHHHHHHHhCCC---ccEEEEeccCCccccccccccc-----chhHhhhhh-cCcccccccc
Q 022960 111 FCAKGRVITAIIGHSKGGNAVLLYASKYND---ISIVINISGRFNLKRGIEGRLG-----LGYLQRIKQ-NGFIDVRNKK 181 (289)
Q Consensus 111 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~ 181 (289)
.......+....|+++|+..+..++...+. ...++.+.........+..... ......+.. ..+... ...
T Consensus 126 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 204 (299)
T COG1073 126 LLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELIDYLITPGGFAPL-PAP 204 (299)
T ss_pred HHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhhhhccCCCCCCC-Ccc
Confidence 111133578999999999999988887762 3344444332222211111110 111111111 111110 000
Q ss_pred cccccccChhhhhhhhccchhhhhcccccC-ceEEEEEeCCCCccChhhHHHHHhhCCC--cEEEEEcCCCccccc-Cch
Q 022960 182 GKLEYRVTQESLMDRLSTDIHAACHMICQD-CRVLTIHGTKDKMVPAEDALEFDKFIPN--HKLHIIEGADHEFTS-HQD 257 (289)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-~~~ 257 (289)
.......... .......+...... .+. +|+|+++|.+|..+|...+..+.+.... .+...+++++|.... ...
T Consensus 205 ~~~~~~~~~~-~~~~~~~d~~~~~~--~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 281 (299)
T COG1073 205 EAPLDTLPLR-AVLLLLLDPFDDAE--KISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPP 281 (299)
T ss_pred cccccccccc-hhhhccCcchhhHh--hcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccH
Confidence 0000000001 11112222222222 223 7999999999999999999998888766 588888999999652 322
Q ss_pred ---HHHHHHHHHHHhhc
Q 022960 258 ---ELASLVIQFIKANY 271 (289)
Q Consensus 258 ---~~~~~i~~fl~~~~ 271 (289)
+....+.+|+.+.+
T Consensus 282 ~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 282 AVEQALDKLAEFLERHL 298 (299)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 68889999998764
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.65 E-value=7.4e-06 Score=62.96 Aligned_cols=104 Identities=16% Similarity=0.177 Sum_probs=67.4
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAII 122 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~ 122 (289)
...+||+.||+|.+....-+..+.+.+.+. |+.+.++. .|-+.. ..-.....++++.+.+.+....+.. +-+.++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~--~s~~~~~~~Qv~~vce~l~~~~~L~-~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ--DSLFMPLRQQASIACEKIKQMKELS-EGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc--cccccCHHHHHHHHHHHHhcchhhc-CceEEE
Confidence 456899999999544333477788888533 67666665 232211 1111334555555555554432222 248999
Q ss_pred EeChhHHHHHHHHHhCCC---ccEEEEeccCC
Q 022960 123 GHSKGGNAVLLYASKYND---ISIVINISGRF 151 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~ 151 (289)
|+|.||.++-.++.+.|+ |+.+|.++++-
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 999999999999999754 99999998754
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.64 E-value=8.8e-06 Score=62.59 Aligned_cols=105 Identities=17% Similarity=0.180 Sum_probs=70.8
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
....++|+.||.|.+....-...+.+.+.+. |..+.++.. |.+....-.....++++.+.+.+....+.. +-+.+
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~na 98 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYNI 98 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhh-CcEEE
Confidence 3456899999999876543466677777553 777777754 333222223344555555555555433222 24899
Q ss_pred EEeChhHHHHHHHHHhCCC---ccEEEEeccCC
Q 022960 122 IGHSKGGNAVLLYASKYND---ISIVINISGRF 151 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~ 151 (289)
+|+|.||.++-.++.+.|+ |+.+|.++++-
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 9999999999999998864 99999998754
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.9e-07 Score=78.37 Aligned_cols=116 Identities=14% Similarity=0.013 Sum_probs=71.5
Q ss_pred EEEEEeecC------CCcEEEEEcCCCCCCCCc--chHHHHHHHHHcCccEEEEccc----cCCCCCCCccccchHHHHH
Q 022960 35 LVGILHETG------SKQLVIVCHGFQSTKDRI--PMVNLAAALEREGISAFRFDFS----GNGESEGSFLYGNYRREAE 102 (289)
Q Consensus 35 l~~~~~~~~------~~~~iv~~hG~~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~ 102 (289)
|+..++.|. +.|++|+|||++....+. ....-...+++.++-|+++++| |+-.+...... .-..-..
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~-~gN~Gl~ 187 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP-SGNYGLL 187 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH-BSTHHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC-chhhhhh
Confidence 454455443 359999999987544321 2333445566778999999999 44333222111 1122357
Q ss_pred HHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCC--C-ccEEEEeccCC
Q 022960 103 DLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYN--D-ISIVINISGRF 151 (289)
Q Consensus 103 d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~ 151 (289)
|...+++|++++ +.++|.|+|+|.||..+..++..-. . ++++|+.++..
T Consensus 188 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 188 DQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 888999999887 5679999999999999887776632 3 99999999844
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.2e-07 Score=65.55 Aligned_cols=109 Identities=19% Similarity=0.246 Sum_probs=66.8
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHH-HHcCccEEEEcc--ccC---CCCC--------C-------Cc---cccchHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAAL-EREGISAFRFDF--SGN---GESE--------G-------SF---LYGNYRR 99 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~--~G~---G~s~--------~-------~~---~~~~~~~ 99 (289)
+-|++.++.|+.++.+.+.-....+.. .++|+.|+.+|- ||. |+++ + .+ .+..|+.
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 358999999999988763333333333 456899999985 342 1111 0 00 0111222
Q ss_pred HHHHHHHHHHHH-HhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 100 EAEDLRAIVQDF-CAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 100 ~~~d~~~~i~~l-~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
..+++.++++.- ...+..++.+.||||||.-|+..+.++|. .+++-..+|-.+
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 234444444311 11155689999999999999999999888 777777666443
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.4e-06 Score=61.73 Aligned_cols=102 Identities=20% Similarity=0.242 Sum_probs=70.9
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEe
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGH 124 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~ 124 (289)
-++|++||.+.+..+.-...+.+.+.+. |..|+++|.- -| -.........++++.+.+.+....+. .+-+.++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-~g--~~~s~l~pl~~Qv~~~ce~v~~m~~l-sqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-DG--IKDSSLMPLWEQVDVACEKVKQMPEL-SQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-CC--cchhhhccHHHHHHHHHHHHhcchhc-cCceEEEEE
Confidence 5789999999877543467777777776 8889999863 33 11222233455555555555433222 234899999
Q ss_pred ChhHHHHHHHHHhCCC--ccEEEEeccCC
Q 022960 125 SKGGNAVLLYASKYND--ISIVINISGRF 151 (289)
Q Consensus 125 S~Gg~~a~~~a~~~p~--v~~~v~~~~~~ 151 (289)
|.||.++-.++...++ |+.+|.++++-
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 9999999998888766 99999998754
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.6e-05 Score=65.60 Aligned_cols=124 Identities=12% Similarity=0.033 Sum_probs=77.7
Q ss_pred EeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHH-----------------------HHHHcCccEE
Q 022960 26 VIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAA-----------------------ALEREGISAF 78 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~-----------------------~l~~~G~~v~ 78 (289)
.+....+..+.+++.+.. +.|+++++-|++|++.. +..+.+ .+.+. .+++
T Consensus 45 ~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~--~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anll 121 (437)
T PLN02209 45 GIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL--SGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANII 121 (437)
T ss_pred EecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh--hhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcEE
Confidence 333334667888777543 57999999999887642 211110 12222 5789
Q ss_pred EEccc-cCCCCCCCc--cccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHh----C-----CC--
Q 022960 79 RFDFS-GNGESEGSF--LYGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASK----Y-----ND-- 140 (289)
Q Consensus 79 ~~d~~-G~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~-- 140 (289)
.+|.| |.|-|.... ...+-++.++|+.+++...-+. ...+++|.|.|+||..+..+|.. . +.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 99965 888775332 2222234567777777655443 23479999999999866666542 1 23
Q ss_pred ccEEEEeccCCc
Q 022960 141 ISIVINISGRFN 152 (289)
Q Consensus 141 v~~~v~~~~~~~ 152 (289)
++++++.+|..+
T Consensus 202 l~Gi~igng~td 213 (437)
T PLN02209 202 LQGYVLGNPITH 213 (437)
T ss_pred eeeEEecCcccC
Confidence 789999888654
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.6e-07 Score=74.80 Aligned_cols=117 Identities=15% Similarity=0.074 Sum_probs=74.6
Q ss_pred EEEEEeecC----CCcEEEEEcCCCCCCCC-cchHHHHHHHHHcC-ccEEEEccc-c-CCCCCCCc----cccchHHHHH
Q 022960 35 LVGILHETG----SKQLVIVCHGFQSTKDR-IPMVNLAAALEREG-ISAFRFDFS-G-NGESEGSF----LYGNYRREAE 102 (289)
Q Consensus 35 l~~~~~~~~----~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~G-~~v~~~d~~-G-~G~s~~~~----~~~~~~~~~~ 102 (289)
|+..++.|. +.|++|+|||++....+ .....--..|+++| +.|+++++| | .|.-.... ....-.--..
T Consensus 80 L~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~ 159 (491)
T COG2272 80 LYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLL 159 (491)
T ss_pred eeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHH
Confidence 444455443 56999999997643221 11122345788887 899999998 2 12111000 0000012247
Q ss_pred HHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCCC----ccEEEEeccCCc
Q 022960 103 DLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYND----ISIVINISGRFN 152 (289)
Q Consensus 103 d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~ 152 (289)
|...+++|++++ +.++|.|+|+|.||+.++.+++. |. +.++|+.++...
T Consensus 160 DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 160 DQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 888888888776 67799999999999998887664 54 777888887664
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.4e-06 Score=67.87 Aligned_cols=110 Identities=15% Similarity=0.227 Sum_probs=77.2
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCcc--EEEEccccCCCCCCC-ccccchHHHHHHHHHHHHHHHhc-CCce
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGIS--AFRFDFSGNGESEGS-FLYGNYRREAEDLRAIVQDFCAK-GRVI 118 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~--v~~~d~~G~G~s~~~-~~~~~~~~~~~d~~~~i~~l~~~-~~~~ 118 (289)
..+.++||+||+..+-+.. ....++.....|+. .+.+.||..|.--+- .+..+...-..++..+|++|.+. ..++
T Consensus 114 ~~k~vlvFvHGfNntf~da-v~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDA-VYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchhHH-HHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 3678999999999886542 44566666666654 677888876653211 12223334468899999999887 4789
Q ss_pred EEEEEeChhHHHHHHHHHhC--------CC-ccEEEEeccCCcc
Q 022960 119 TAIIGHSKGGNAVLLYASKY--------ND-ISIVINISGRFNL 153 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~--------p~-v~~~v~~~~~~~~ 153 (289)
|+|++||||.++++....+. +. ++-+|+.+|-.+.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 99999999999998876542 22 7788887775543
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=8.1e-07 Score=71.01 Aligned_cols=100 Identities=24% Similarity=0.398 Sum_probs=70.1
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCcc---EEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEE
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGIS---AFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITA 120 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~ 120 (289)
.-++|++||++..... +..+...+...|+. ++.+++++. ... . +.....+.+...++..... +.+++.
T Consensus 59 ~~pivlVhG~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~-~----~~~~~~~ql~~~V~~~l~~~ga~~v~ 130 (336)
T COG1075 59 KEPIVLVHGLGGGYGN--FLPLDYRLAILGWLTNGVYAFELSGG-DGT-Y----SLAVRGEQLFAYVDEVLAKTGAKKVN 130 (336)
T ss_pred CceEEEEccCcCCcch--hhhhhhhhcchHHHhccccccccccc-CCC-c----cccccHHHHHHHHHHHHhhcCCCceE
Confidence 4489999999776654 77777777777877 888888865 111 1 1112233344444333222 667899
Q ss_pred EEEeChhHHHHHHHHHhCC--C-ccEEEEeccCCc
Q 022960 121 IIGHSKGGNAVLLYASKYN--D-ISIVINISGRFN 152 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~~ 152 (289)
++|||+||.++..++...+ . |+.++.++++-.
T Consensus 131 LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 131 LIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred EEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 9999999999999999888 4 999999987643
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.42 E-value=6.1e-06 Score=65.84 Aligned_cols=148 Identities=15% Similarity=0.159 Sum_probs=92.0
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCCCccEEEEecc-CCcccccccccccchhHhhhh-hcC--cccccccccccccccCh
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYNDISIVINISG-RFNLKRGIEGRLGLGYLQRIK-QNG--FIDVRNKKGKLEYRVTQ 190 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~ 190 (289)
.+++++|.|.|==|..++..|+..|+|++++-+.- .++....+.... +... ... +.+... .........
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y-----~~yG~~ws~a~~dY~~--~gi~~~l~t 242 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQY-----RSYGGNWSFAFQDYYN--EGITQQLDT 242 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHH-----HHhCCCCccchhhhhH--hCchhhcCC
Confidence 68899999999999999999997777888886643 222222111110 0000 000 000000 000111111
Q ss_pred hhhhhhhc-cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEcCCCcccccCchHHHHHHHHHHH
Q 022960 191 ESLMDRLS-TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHEFTSHQDELASLVIQFIK 268 (289)
Q Consensus 191 ~~~~~~~~-~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 268 (289)
..+..... -|...... +++.|-++|.|..|++..++....+.+.+|+ ..+..+|+++|.... .++.+.+..|+.
T Consensus 243 p~f~~L~~ivDP~~Y~~--rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~~ 318 (367)
T PF10142_consen 243 PEFDKLMQIVDPYSYRD--RLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFYN 318 (367)
T ss_pred HHHHHHHHhcCHHHHHH--hcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHHH
Confidence 11111111 11111112 3489999999999999999999999999986 678889999999755 778888999998
Q ss_pred hhcCC
Q 022960 269 ANYQK 273 (289)
Q Consensus 269 ~~~~~ 273 (289)
.....
T Consensus 319 ~~~~~ 323 (367)
T PF10142_consen 319 RIQNG 323 (367)
T ss_pred HHHcC
Confidence 76543
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=98.42 E-value=6.5e-05 Score=62.12 Aligned_cols=121 Identities=11% Similarity=-0.003 Sum_probs=73.8
Q ss_pred CCceEEEEEeec----CCCcEEEEEcCCCCCCCC-cchHHHH--------------------HHHHHcCccEEEEccc-c
Q 022960 31 HGEKLVGILHET----GSKQLVIVCHGFQSTKDR-IPMVNLA--------------------AALEREGISAFRFDFS-G 84 (289)
Q Consensus 31 ~g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~-~~~~~~~--------------------~~l~~~G~~v~~~d~~-G 84 (289)
.+..+.+++.+. .+.|+|+++-|++|++.. ..+.... ..+.+. .+++.+|.| |
T Consensus 48 ~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPvG 126 (433)
T PLN03016 48 ENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIFLDQPVG 126 (433)
T ss_pred CCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEEecCCCC
Confidence 356788887654 367999999999887642 0011100 112222 679999965 8
Q ss_pred CCCCCCCcc--ccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHh----C-----CC--ccEEEEe
Q 022960 85 NGESEGSFL--YGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASK----Y-----ND--ISIVINI 147 (289)
Q Consensus 85 ~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~----~-----p~--v~~~v~~ 147 (289)
.|-|..... ...-.+.++++..++...-+. ...+++|.|.|+||..+..+|.. . +. ++++++-
T Consensus 127 tGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iG 206 (433)
T PLN03016 127 SGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLG 206 (433)
T ss_pred CCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEec
Confidence 888754321 111123346666666544333 33579999999999876666543 1 23 7899988
Q ss_pred ccCCc
Q 022960 148 SGRFN 152 (289)
Q Consensus 148 ~~~~~ 152 (289)
+|..+
T Consensus 207 Ng~t~ 211 (433)
T PLN03016 207 NPVTY 211 (433)
T ss_pred CCCcC
Confidence 88553
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.3e-06 Score=56.93 Aligned_cols=59 Identities=22% Similarity=0.349 Sum_probs=52.6
Q ss_pred CceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
..|+|++.++.|+.+|.+.++.+++.+++++++.+++.||..+ ....-+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 5799999999999999999999999999999999999999976 4446677888899864
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.33 E-value=4e-06 Score=71.40 Aligned_cols=104 Identities=14% Similarity=0.161 Sum_probs=65.3
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHH----------------cCccEEEEccccCCCCCCCccccchHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALER----------------EGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI 107 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~----------------~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~ 107 (289)
++-+|+|++|..|+... .+.++....+ ..++.+++|+-+-- . ........++++-+.++
T Consensus 88 sGIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~--t-Am~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEF--T-AMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchh--h-hhccHhHHHHHHHHHHH
Confidence 46699999999998754 5666655442 13566777765300 0 01122445666677777
Q ss_pred HHHHHhc-------C---CceEEEEEeChhHHHHHHHHHhC---CC-ccEEEEeccCCc
Q 022960 108 VQDFCAK-------G---RVITAIIGHSKGGNAVLLYASKY---ND-ISIVINISGRFN 152 (289)
Q Consensus 108 i~~l~~~-------~---~~~~~l~G~S~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~ 152 (289)
|.++... . +..|+++||||||.+|...+... ++ |.-++..+++..
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 7666443 1 45699999999999998765432 23 666776665543
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.3e-05 Score=62.97 Aligned_cols=225 Identities=16% Similarity=0.120 Sum_probs=112.2
Q ss_pred CCcEEEEEcCCCCCCCCc-chHHHHHHHHHcCccEEEEccc--cCC------------CCC---CCc----c-ccchHHH
Q 022960 44 SKQLVIVCHGFQSTKDRI-PMVNLAAALEREGISAFRFDFS--GNG------------ESE---GSF----L-YGNYRRE 100 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~--G~G------------~s~---~~~----~-~~~~~~~ 100 (289)
+-|+++++||..++.... ....+-+.....|+.++++|-. +.+ .|- ... . ...+++.
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 457889999999885432 2334555556668888886332 222 110 000 0 1222222
Q ss_pred -HHHHHHHHHHHHhcCC--ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCccc
Q 022960 101 -AEDLRAIVQDFCAKGR--VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID 176 (289)
Q Consensus 101 -~~d~~~~i~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (289)
.+++...++....... ++..++||||||+-|+.+|.++|+ ++.+..++|.+.......... .+...........
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~--~~~~~~g~~~~~~ 210 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTL--AMGDPWGGKAFNA 210 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccc--cccccccCccHHH
Confidence 3445544432211111 268999999999999999999988 999999998877653332220 0000000000000
Q ss_pred ccccccc-cccccChhhhhhhhccc--hhhhhcccccCceEEEEEeCCCCccC--hhhHHHHHhhCC----CcEEEEEcC
Q 022960 177 VRNKKGK-LEYRVTQESLMDRLSTD--IHAACHMICQDCRVLTIHGTKDKMVP--AEDALEFDKFIP----NHKLHIIEG 247 (289)
Q Consensus 177 ~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~ 247 (289)
....... .-...+.....+.+... ........ ...++++-+|..|.+.. ....+.+.+.+. +..+...++
T Consensus 211 ~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~-~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~ 289 (316)
T COG0627 211 MLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGG-SPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPG 289 (316)
T ss_pred hcCCCccccccccCchhHHHHhhhcccccceeccc-CCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCC
Confidence 0000001 00111112222211100 00000000 24577788899888764 223455555543 356666678
Q ss_pred CCcccccCchHHHHHHHHHHHhhcC
Q 022960 248 ADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 248 ~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
+.|.+.. -....+....|+...+.
T Consensus 290 G~Hsw~~-w~~~l~~~~~~~a~~l~ 313 (316)
T COG0627 290 GDHSWYF-WASQLADHLPWLAGALG 313 (316)
T ss_pred CCcCHHH-HHHHHHHHHHHHHHHhc
Confidence 8898521 23455556666666554
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.3e-06 Score=61.31 Aligned_cols=81 Identities=17% Similarity=0.213 Sum_probs=51.5
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCcc-EEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGIS-AFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
..+..|||..|+|.+... +..+. ...++. ++++|+|.. +++ .| +. ..+.+.|
T Consensus 9 ~~~~LilfF~GWg~d~~~--f~hL~---~~~~~D~l~~yDYr~l----------~~d---~~----~~-----~y~~i~l 61 (213)
T PF04301_consen 9 NGKELILFFAGWGMDPSP--FSHLI---LPENYDVLICYDYRDL----------DFD---FD----LS-----GYREIYL 61 (213)
T ss_pred CCCeEEEEEecCCCChHH--hhhcc---CCCCccEEEEecCccc----------ccc---cc----cc-----cCceEEE
Confidence 345799999999988643 33221 123455 466788721 111 01 11 5678999
Q ss_pred EEeChhHHHHHHHHHhCCCccEEEEeccCC
Q 022960 122 IGHSKGGNAVLLYASKYNDISIVINISGRF 151 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~ 151 (289)
|++|||-.+|..+.... .++..|.++|..
T Consensus 62 vAWSmGVw~A~~~l~~~-~~~~aiAINGT~ 90 (213)
T PF04301_consen 62 VAWSMGVWAANRVLQGI-PFKRAIAINGTP 90 (213)
T ss_pred EEEeHHHHHHHHHhccC-CcceeEEEECCC
Confidence 99999999998876543 367777777643
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.3e-06 Score=68.36 Aligned_cols=83 Identities=19% Similarity=0.243 Sum_probs=63.0
Q ss_pred chHHHHHHHHHcCccE-----EE-EccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHH
Q 022960 62 PMVNLAAALEREGISA-----FR-FDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYA 135 (289)
Q Consensus 62 ~~~~~~~~l~~~G~~v-----~~-~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a 135 (289)
+|..+++.|.+.||.. .+ +|+|- ... ..+.....+...|+.+.....++++|+||||||.++..++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~-------~~~-~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL-------SPA-ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh-------chh-hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 5899999999988752 22 67772 111 2345567788888887666677999999999999999988
Q ss_pred HhCC------C-ccEEEEeccCCc
Q 022960 136 SKYN------D-ISIVINISGRFN 152 (289)
Q Consensus 136 ~~~p------~-v~~~v~~~~~~~ 152 (289)
...+ + |+++|.+++++.
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCC
Confidence 8762 2 999999998764
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.7e-06 Score=63.02 Aligned_cols=107 Identities=21% Similarity=0.299 Sum_probs=54.5
Q ss_pred CCCcEEEEEcCCCCCCCC-cchHHHHHHHHHc--CccEEEEccccCCCC-CCCc-cccchHHHHHHHHHHHHHHHhcCCc
Q 022960 43 GSKQLVIVCHGFQSTKDR-IPMVNLAAALERE--GISAFRFDFSGNGES-EGSF-LYGNYRREAEDLRAIVQDFCAKGRV 117 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~--G~~v~~~d~~G~G~s-~~~~-~~~~~~~~~~d~~~~i~~l~~~~~~ 117 (289)
.+..+||+.||+|.+... ..+..+.+.+.+. |..|.+++.- -+.+ +... ......+.++.+.+.+....+.. +
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~-~ 80 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELA-N 80 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGT-T
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhh-c
Confidence 345689999999976421 1255555555544 6778888763 1111 1000 01222333444444444322221 3
Q ss_pred eEEEEEeChhHHHHHHHHHhCCC--ccEEEEeccCC
Q 022960 118 ITAIIGHSKGGNAVLLYASKYND--ISIVINISGRF 151 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~ 151 (289)
-+.++|+|.||.++-.++.+.+. |+.+|.++++-
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 59999999999999999999876 99999998754
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.5e-05 Score=58.90 Aligned_cols=108 Identities=12% Similarity=0.067 Sum_probs=61.6
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcC----ccEEEEccccCCCCCCCccccchHHHHHH-HHHHHHHHHhc----
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREG----ISAFRFDFSGNGESEGSFLYGNYRREAED-LRAIVQDFCAK---- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~~G~G~s~~~~~~~~~~~~~~d-~~~~i~~l~~~---- 114 (289)
+.|++++.||-....... .....+.|...| -.++.+|.--.-.. ...........+. ..+++=++++.
T Consensus 97 k~pvl~~~DG~~~~~~g~-i~~~~dsli~~g~i~pai~vgid~~d~~~R--~~~~~~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGR-IPRILDSLIAAGEIPPAILVGIDYIDVKKR--REELHCNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred cccEEEEeccHHHHhcCC-hHHHHHHHHHcCCCCCceEEecCCCCHHHH--HHHhcccHHHHHHHHHHhhhhhhccCccc
Confidence 678999999854332212 233444444443 33555554310000 0001111222222 23344444443
Q ss_pred -CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 115 -GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 115 -~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
....-+|.|.|+||.+++..+..+|+ +..++..+|.+...
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 23456999999999999999999999 88888888866543
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.5e-06 Score=65.49 Aligned_cols=102 Identities=17% Similarity=0.097 Sum_probs=74.5
Q ss_pred cEEEEEcCCCCCCCC-----cchHHHHHHHHHcCccEEEEccccCCCCCCC----------ccccchHHHHHHHHHHHHH
Q 022960 46 QLVIVCHGFQSTKDR-----IPMVNLAAALEREGISAFRFDFSGNGESEGS----------FLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~-----~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~----------~~~~~~~~~~~d~~~~i~~ 110 (289)
.+|+|.-|.-++.+. .+...+++.+ +--++.++.|-+|+|.+- -...+.++...|..+++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 568888887776542 1222233333 567899999999998631 1233446777999999999
Q ss_pred HHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccC
Q 022960 111 FCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGR 150 (289)
Q Consensus 111 l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~ 150 (289)
|+.. ...+|+.+|-|+||++|..+=.++|. |.|.+..+.+
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 9887 45689999999999999999999999 6666655543
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00037 Score=57.47 Aligned_cols=130 Identities=18% Similarity=0.070 Sum_probs=80.7
Q ss_pred cceeeEEeeC--CCCceEEEEEeec----CCCcEEEEEcCCCCCCCCcchHHHHHHH-------------------HHcC
Q 022960 20 VQRRRVVIPN--SHGEKLVGILHET----GSKQLVIVCHGFQSTKDRIPMVNLAAAL-------------------EREG 74 (289)
Q Consensus 20 ~~~~~~~~~~--~~g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~~~~~~~~~~l-------------------~~~G 74 (289)
+......+.. ..+..+.|++.+. ...|.||++-|++|.+.- . .+..++ .+.
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl--~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~- 117 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSL--G-GLFEENGPFRVKYNGKTLYLNPYSWNKE- 117 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccch--h-hhhhhcCCeEEcCCCCcceeCCcccccc-
Confidence 3334444444 3688899988764 368899999999988742 1 222221 111
Q ss_pred ccEEEEccc-cCCCCCCCc--c-ccchHHHHHHHHHHHH-HHHhc---CCceEEEEEeChhHHHHHHHHHh----C----
Q 022960 75 ISAFRFDFS-GNGESEGSF--L-YGNYRREAEDLRAIVQ-DFCAK---GRVITAIIGHSKGGNAVLLYASK----Y---- 138 (289)
Q Consensus 75 ~~v~~~d~~-G~G~s~~~~--~-~~~~~~~~~d~~~~i~-~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~----~---- 138 (289)
-+++.+|.| |.|-|-... . ..+-+..++|...++. ++.+. .-.+++|.|-|++|...-.+|.. +
T Consensus 118 aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~ 197 (454)
T KOG1282|consen 118 ANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCC 197 (454)
T ss_pred ccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccccc
Confidence 468888988 666664222 1 1233455666666554 44433 34579999999999766666543 2
Q ss_pred -CC--ccEEEEeccCCcc
Q 022960 139 -ND--ISIVINISGRFNL 153 (289)
Q Consensus 139 -p~--v~~~v~~~~~~~~ 153 (289)
|. ++|+++-+|..+.
T Consensus 198 ~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 198 KPNINLKGYAIGNGLTDP 215 (454)
T ss_pred CCcccceEEEecCcccCc
Confidence 33 7899988886543
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.0002 Score=57.18 Aligned_cols=105 Identities=19% Similarity=0.151 Sum_probs=82.3
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc---ccchHHHHHHHHHHHHHHHhcCCceE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL---YGNYRREAEDLRAIVQDFCAKGRVIT 119 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~~~~~~~d~~~~i~~l~~~~~~~~ 119 (289)
-.+|+|+..-|++..... ........| +-+-+.+++|-++.|...+. ..+.++.+.|...+++.++..-..+.
T Consensus 61 ~drPtV~~T~GY~~~~~p-~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kW 136 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSP-RRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKW 136 (448)
T ss_pred CCCCeEEEecCcccccCc-cccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCc
Confidence 378999999998876542 223344333 24778999999999986553 45678889999999999988866789
Q ss_pred EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 120 AIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
+--|-|=||+.++.+=.-+|+ |++.|.-..+.
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 999999999999988888899 99988765544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00041 Score=50.13 Aligned_cols=105 Identities=13% Similarity=0.166 Sum_probs=62.7
Q ss_pred CCcEEEEEcCCCCCCCCcch---------------HHHHHHHHHcCccEEEEcccc---CCCCCCCccccchHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPM---------------VNLAAALEREGISAFRFDFSG---NGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~---------------~~~~~~l~~~G~~v~~~d~~G---~G~s~~~~~~~~~~~~~~d~~ 105 (289)
++..+|+|||.|..... .| -++++.-.+.||.|++.+.-- +-++...+..+ ...-++-+.
T Consensus 100 ~~kLlVLIHGSGvVrAG-QWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~ky-irt~veh~~ 177 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAG-QWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKY-IRTPVEHAK 177 (297)
T ss_pred ccceEEEEecCceEecc-hHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchh-ccchHHHHH
Confidence 56689999998865432 12 224455556699999987541 11111111110 011122223
Q ss_pred HHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC---ccEEEEeccC
Q 022960 106 AIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND---ISIVINISGR 150 (289)
Q Consensus 106 ~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~ 150 (289)
.+-..+... ..+.+.++.||+||...+.+..+.|+ |.++.+-+++
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 332332222 66789999999999999999999987 6677666654
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0003 Score=52.51 Aligned_cols=102 Identities=20% Similarity=0.163 Sum_probs=63.1
Q ss_pred ecCCCcEEEEEcCCCCC-CCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccch-HHHHHHHHHHHHHHHhc-C--
Q 022960 41 ETGSKQLVIVCHGFQST-KDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNY-RREAEDLRAIVQDFCAK-G-- 115 (289)
Q Consensus 41 ~~~~~~~iv~~hG~~~~-~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~-~~~~~d~~~~i~~l~~~-~-- 115 (289)
++.+..+|=|+-|..-. .-.-.|+.+.+.|+++||.|++.-+.- .++.... .+..+.....++.+... +
T Consensus 13 P~~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 13 PPRPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV------TFDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCCCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC------CCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 44455566677774322 222358999999999999999987641 1111111 12223444455555443 1
Q ss_pred --CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEec
Q 022960 116 --RVITAIIGHSKGGNAVLLYASKYND-ISIVINIS 148 (289)
Q Consensus 116 --~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~ 148 (289)
.-+++-+|||+|+-+-+.+...++. -++-++++
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 1367889999999998887777654 56666665
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=97.85 E-value=6.4e-05 Score=63.01 Aligned_cols=90 Identities=20% Similarity=0.139 Sum_probs=60.8
Q ss_pred cchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHh
Q 022960 61 IPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 61 ~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
+.|..+++.|++.||. -.++.|...--+.. .....+.+...+..+|+.+... +.++++|+||||||.+++.+...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 4579999999999997 34444332211111 0112245557788888877555 46799999999999999998763
Q ss_pred C-----------C----C-ccEEEEeccCCc
Q 022960 138 Y-----------N----D-ISIVINISGRFN 152 (289)
Q Consensus 138 ~-----------p----~-v~~~v~~~~~~~ 152 (289)
. + + |++.|.+++++.
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccC
Confidence 2 1 1 789999988653
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0014 Score=49.97 Aligned_cols=105 Identities=8% Similarity=0.001 Sum_probs=71.3
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIG 123 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G 123 (289)
..|.|+++-...|+... ..+.-.+.|... ..|+..|+-..-.-+-.....++++.++.+.+.+..+ +.+ +++++
T Consensus 102 pdPkvLivapmsGH~aT-LLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~---Gp~-~hv~a 175 (415)
T COG4553 102 PDPKVLIVAPMSGHYAT-LLRGTVEALLPY-HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL---GPD-AHVMA 175 (415)
T ss_pred CCCeEEEEecccccHHH-HHHHHHHHhccc-cceeEeeccccceeecccCCccHHHHHHHHHHHHHHh---CCC-CcEEE
Confidence 45678888888877654 456666666665 6788888875444333445567788888888888888 554 78888
Q ss_pred eChhHH-----HHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 124 HSKGGN-----AVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 124 ~S~Gg~-----~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
.|.=+. +++..+...|. ...+++++++.+..
T Consensus 176 VCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 176 VCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred EecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 887653 33333333465 78999999887653
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0011 Score=54.23 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=79.1
Q ss_pred CCCcEEEEEcCCCCCCCCcc---hHHHHHHHHHcCccEEEEccccCCCCCCCc-------cccchHHHHHHHHHHHHHHH
Q 022960 43 GSKQLVIVCHGFQSTKDRIP---MVNLAAALEREGISAFRFDFSGNGESEGSF-------LYGNYRREAEDLRAIVQDFC 112 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~---~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~d~~~~i~~l~ 112 (289)
..+|..++|-|=+.....|. -..+...-.+.|-.|+.++.|-+|.|.+.. ...+..+...|+.++|+.+.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 46788888888665443320 112223333448899999999999885422 12344677899999999886
Q ss_pred hc----CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 113 AK----GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 113 ~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
.+ +..+++.+|-|+-|.++..+=..+|+ +.+.|.-++++.
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 66 23489999999999999999999999 888887776653
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0076 Score=43.29 Aligned_cols=107 Identities=21% Similarity=0.197 Sum_probs=64.3
Q ss_pred CCcEEEEEcCCCCCCCCcch--H----HHHHHHH----H--cCccEEEEccccCCCCC-CC---ccccchHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPM--V----NLAAALE----R--EGISAFRFDFSGNGESE-GS---FLYGNYRREAEDLRAI 107 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~--~----~~~~~l~----~--~G~~v~~~d~~G~G~s~-~~---~~~~~~~~~~~d~~~~ 107 (289)
...+.++++|.+.+...... . .+.+.+. . .+-.+-++-+.||-... .. .....-..-+.++..+
T Consensus 18 A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f 97 (177)
T PF06259_consen 18 ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARF 97 (177)
T ss_pred cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHH
Confidence 56688999998877653111 1 1222111 1 12345555555553331 11 1111124446778888
Q ss_pred HHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccC
Q 022960 108 VQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGR 150 (289)
Q Consensus 108 i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~ 150 (289)
++.|+.. ...++.++|||+|+.++-..+...+. +..+|+++++
T Consensus 98 ~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 98 LDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 8887665 34579999999999999987777444 8888888653
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00054 Score=48.43 Aligned_cols=53 Identities=17% Similarity=0.115 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCC-----CccEEEEeccCC
Q 022960 99 REAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYN-----DISIVINISGRF 151 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~ 151 (289)
.....+...++..... ...+++++|||+||.+|..++.... .+..++.++++.
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 3445555556555432 4568999999999999999887763 255566666543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00038 Score=40.42 Aligned_cols=44 Identities=18% Similarity=0.139 Sum_probs=26.2
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC--------CCcEEEEEcCCCCCCCCc
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG--------SKQLVIVCHGFQSTKDRI 61 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~--------~~~~iv~~hG~~~~~~~~ 61 (289)
.+.+.++..+.+.||..|..+..+.+ ++|+|++.||+.+++..|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 35677899999999998887655433 488999999999998763
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00046 Score=59.67 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=63.5
Q ss_pred CcEEEEEcCCCCCCCCc-ch--HHHHHHHHHcCccEEEEccc----cCCCCCC--CccccchHHHHHHHHHHHHHHHhc-
Q 022960 45 KQLVIVCHGFQSTKDRI-PM--VNLAAALEREGISAFRFDFS----GNGESEG--SFLYGNYRREAEDLRAIVQDFCAK- 114 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~-~~--~~~~~~l~~~G~~v~~~d~~----G~G~s~~--~~~~~~~~~~~~d~~~~i~~l~~~- 114 (289)
-|++|++||++....+. .+ ......+..+...|+.+.+| |+..... ...... ..|...+++|++++
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g----l~Dq~~AL~wv~~~I 187 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG----LFDQLLALRWVKDNI 187 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCccc----HHHHHHHHHHHHHHH
Confidence 59999999987543321 11 12222333335778888888 3322221 112222 24777777777666
Q ss_pred -----CCceEEEEEeChhHHHHHHHHHhCC--C-ccEEEEeccCC
Q 022960 115 -----GRVITAIIGHSKGGNAVLLYASKYN--D-ISIVINISGRF 151 (289)
Q Consensus 115 -----~~~~~~l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~ 151 (289)
+.++|.|+|||.||..+..++..-. . +..+|..++..
T Consensus 188 ~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 188 PSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred HhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 6779999999999999887665321 2 66677776653
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.002 Score=45.02 Aligned_cols=55 Identities=22% Similarity=0.216 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 100 EAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 100 ~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
.++.-.+.-.++.+. =+.+.++-|-||||+.|+.+.-++|+ +.++|.+++.++..
T Consensus 83 r~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdar 139 (227)
T COG4947 83 RAERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHH
Confidence 344444444555444 23457889999999999999999999 89999999988754
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0011 Score=45.97 Aligned_cols=37 Identities=24% Similarity=0.367 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC
Q 022960 102 EDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 102 ~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
+.+.+.++.+.++ ...++++.|||+||.+|..++...
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3444444444433 446899999999999999888763
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0017 Score=48.70 Aligned_cols=46 Identities=33% Similarity=0.383 Sum_probs=32.4
Q ss_pred HHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCC----C-ccEEEEeccC
Q 022960 105 RAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYN----D-ISIVINISGR 150 (289)
Q Consensus 105 ~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~-v~~~v~~~~~ 150 (289)
.+.++.+.+....++.+.|||.||.+|..++...+ + |..++..+++
T Consensus 72 ~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 72 LAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 33444443333446999999999999999888743 2 7788877764
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0015 Score=53.27 Aligned_cols=85 Identities=19% Similarity=0.188 Sum_probs=57.7
Q ss_pred cchHHHHHHHHHcCcc------EEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHH
Q 022960 61 IPMVNLAAALEREGIS------AFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLL 133 (289)
Q Consensus 61 ~~~~~~~~~l~~~G~~------v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~ 133 (289)
++|..+++.|..-||. -..+|+|=.-. .....++....+...|+...+. +.++++||+|||||.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~-----~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYH-----NSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccC-----ChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 4788999999988887 34467772110 1112244456667777666544 5589999999999999999
Q ss_pred HHHhCCC---------ccEEEEeccC
Q 022960 134 YASKYND---------ISIVINISGR 150 (289)
Q Consensus 134 ~a~~~p~---------v~~~v~~~~~ 150 (289)
+....+. +++++.++++
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCch
Confidence 9887754 4566666543
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0053 Score=51.46 Aligned_cols=100 Identities=16% Similarity=0.116 Sum_probs=63.1
Q ss_pred CCcEEEEEcCCCCCCCC-cchHHHHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc------C
Q 022960 44 SKQLVIVCHGFQSTKDR-IPMVNLAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK------G 115 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~------~ 115 (289)
++-.|+-+||+|....+ .......+.+++. |..|+.+||-=. ....|....+.+.-+.-|+.++ -
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLA-------PEaPFPRaleEv~fAYcW~inn~allG~T 467 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLA-------PEAPFPRALEEVFFAYCWAINNCALLGST 467 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccC-------CCCCCCcHHHHHHHHHHHHhcCHHHhCcc
Confidence 55588899999854322 1123333444433 899999998622 2223344456666666666555 3
Q ss_pred CceEEEEEeChhHHHHHHHHHh----CCC-ccEEEEeccC
Q 022960 116 RVITAIIGHSKGGNAVLLYASK----YND-ISIVINISGR 150 (289)
Q Consensus 116 ~~~~~l~G~S~Gg~~a~~~a~~----~p~-v~~~v~~~~~ 150 (289)
.++|+++|.|.||.+.+.++.+ .=+ .+++++..++
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 5799999999999876655544 223 5788877654
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.00096 Score=50.49 Aligned_cols=39 Identities=38% Similarity=0.322 Sum_probs=34.4
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcc
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNL 153 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~ 153 (289)
+.++..++|||+||.+++.....+|+ +...++++|.+-+
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 55678999999999999999999999 9999999986544
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.02 Score=41.51 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=54.5
Q ss_pred EEEEEcCCCCCCCC-cchHHHHHHHHHc-C---ccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEE
Q 022960 47 LVIVCHGFQSTKDR-IPMVNLAAALERE-G---ISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITA 120 (289)
Q Consensus 47 ~iv~~hG~~~~~~~-~~~~~~~~~l~~~-G---~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~ 120 (289)
-||+..|.+..... ..-..+.+.|.+. | ..+..++||-..... ....+...-+.++...++..... ...+++
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kiv 84 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIV 84 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 35555565543321 1233455555543 3 445556676322111 11123334456666666655444 456899
Q ss_pred EEEeChhHHHHHHHHHh--CC----C-ccEEEEeccCC
Q 022960 121 IIGHSKGGNAVLLYASK--YN----D-ISIVINISGRF 151 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~--~p----~-v~~~v~~~~~~ 151 (289)
|+|+|.|+.++..++.. .+ + |.++++++-+.
T Consensus 85 l~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 85 LAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp EEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred EEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 99999999999998877 22 2 78888886543
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.004 Score=49.13 Aligned_cols=132 Identities=11% Similarity=0.114 Sum_probs=75.8
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccC-Ccccccccc---cccchhHhhhhhcCcccccccccccccccCh
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGR-FNLKRGIEG---RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQ 190 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (289)
.++.+++-|-|--|+.++..|...|+|.++|....- ++....+.. ..+..|...+ .... ......+...
T Consensus 232 ~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l-----~pyy--aegi~erl~t 304 (507)
T COG4287 232 EIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKL-----APYY--AEGIDERLET 304 (507)
T ss_pred eeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCccc-----chhH--hhhHHHhhcC
Confidence 778999999999999999999999998887754321 111111100 0000000000 0000 0000001111
Q ss_pred hhhhhhhc----cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEcCCCcccc
Q 022960 191 ESLMDRLS----TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHEFT 253 (289)
Q Consensus 191 ~~~~~~~~----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~ 253 (289)
..+.+... ..+....-..++..|-.++.+..|.+.+++.+.-+++.+|+ .-+.++|+..|...
T Consensus 305 p~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~ 372 (507)
T COG4287 305 PLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI 372 (507)
T ss_pred HHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh
Confidence 11111110 00111111224578999999999999999999999999998 56788899999854
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0031 Score=47.89 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHh
Q 022960 99 REAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
....++...+..+.++ ...++++.|||+||.+|..++..
T Consensus 109 ~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 109 SLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHH
Confidence 3344555555544443 44589999999999999988775
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0024 Score=46.86 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=44.8
Q ss_pred HHHHHcCccEEEEccccCCCC-----CCCccccchHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhC
Q 022960 68 AALEREGISAFRFDFSGNGES-----EGSFLYGNYRREAEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 68 ~~l~~~G~~v~~~d~~G~G~s-----~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
..+... .+|+++=+|=.... ........++-...|+.++.++..++ +..+++|+|||.|+.+..+++...
T Consensus 40 s~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 334444 57888877732211 11111122233357888888766555 456899999999999999998875
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0031 Score=52.01 Aligned_cols=103 Identities=16% Similarity=0.165 Sum_probs=65.7
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHH-------------------HHHcCccEEEEccc-cCCCCCC--CccccchHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAA-------------------LEREGISAFRFDFS-GNGESEG--SFLYGNYRREA 101 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~-------------------l~~~G~~v~~~d~~-G~G~s~~--~~~~~~~~~~~ 101 (289)
++|.|+++.|++|++.. +..+.+. +.+. -.++.+|+| |.|.|.. .....++....
T Consensus 100 ~rPvi~wlNGGPGcSS~--~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 100 NRPVIFWLNGGPGCSSV--TGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCceEEEecCCCChHhh--hhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccc
Confidence 68999999999998742 3333211 1222 368889955 8888873 33444555556
Q ss_pred HHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCCC----ccEEEEecc
Q 022960 102 EDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYND----ISIVINISG 149 (289)
Q Consensus 102 ~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~ 149 (289)
+|+..+.+.+.+. ...+.+|+|-|+||.-+..+|....+ .++++++.+
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlss 234 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSS 234 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeee
Confidence 6766666555433 33489999999999888777764321 455555544
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0075 Score=49.11 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhc-CCc--eEEEEEeChhHHHHHHHHHh
Q 022960 100 EAEDLRAIVQDFCAK-GRV--ITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 100 ~~~d~~~~i~~l~~~-~~~--~~~l~G~S~Gg~~a~~~a~~ 137 (289)
..+++...++.+.+. ... +|++.|||+||.+|+..|..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 445666666666554 222 49999999999999998854
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.13 Score=41.31 Aligned_cols=224 Identities=13% Similarity=0.101 Sum_probs=115.3
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
+...+||++=|+.+..+. ..........+.|+.++.+-.|-+-....... .........-+.+++.... -+..++++
T Consensus 36 ~s~k~Iv~~~gWag~~~r-~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~-~~~~pi~f 113 (350)
T KOG2521|consen 36 ESEKPIVVLLGWAGAIDR-NLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYN-SDPCPIIF 113 (350)
T ss_pred CccccEEEEeeeccccch-hHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhcc-CCcCceEE
Confidence 344456666677777664 45667777778899998887775432221111 1121222234444444332 24557888
Q ss_pred EEeChhHHHHHHHH---Hh-C-CC----ccEEEEeccCCcccccccccc------cchhHhhhhhcCccc-----ccccc
Q 022960 122 IGHSKGGNAVLLYA---SK-Y-ND----ISIVINISGRFNLKRGIEGRL------GLGYLQRIKQNGFID-----VRNKK 181 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a---~~-~-p~----v~~~v~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-----~~~~~ 181 (289)
--+|+||...+... .. . |. ..+++..+.+.........+. .......+.+..+.- .....
T Consensus 114 h~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 193 (350)
T KOG2521|consen 114 HVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEG 193 (350)
T ss_pred EEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeeccc
Confidence 89999997655433 21 2 33 455666654433211111000 011111111111000 00000
Q ss_pred ccccccc--------ChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCC
Q 022960 182 GKLEYRV--------TQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGAD 249 (289)
Q Consensus 182 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~g 249 (289)
+...... ....+.+++..+ ......+.+.+++..|.++|.+..+++.+... +++.+-+.++-
T Consensus 194 ~~~~~~~~~~~~~~~r~~~~~~r~~~~------~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~ 267 (350)
T KOG2521|consen 194 GAYLLGPLAEKISMSRKYHFLDRYEEQ------RNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSE 267 (350)
T ss_pred chhhhhhhhhccccccchHHHHHHHhh------hhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCcc
Confidence 0000000 001111111111 11125688899999999999998888754432 35666667788
Q ss_pred cccc--cCchHHHHHHHHHHHhhcCCC
Q 022960 250 HEFT--SHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 250 H~~~--~~~~~~~~~i~~fl~~~~~~~ 274 (289)
|..+ ..+..+.+...+|++......
T Consensus 268 H~~h~r~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 268 HVAHFRSFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred ceeeeccCcHHHHHHHHHHHHhccccc
Confidence 8843 567899999999999876543
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.52 Score=39.35 Aligned_cols=113 Identities=12% Similarity=0.072 Sum_probs=60.0
Q ss_pred CCceEEEEEeecC-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEE-EEccccCCCCCCCccccchHH-HHHHHHHH
Q 022960 31 HGEKLVGILHETG-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAF-RFDFSGNGESEGSFLYGNYRR-EAEDLRAI 107 (289)
Q Consensus 31 ~g~~l~~~~~~~~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~-~~d~~G~G~s~~~~~~~~~~~-~~~d~~~~ 107 (289)
.+..+.+++.+.. +.|..|+.-|+-. .+...-..+.+.| |...+ .-|.|=-|.+--. ....+++ ..+-+.+.
T Consensus 274 ~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYl-Gs~eyE~~I~~~I~~~ 348 (511)
T TIGR03712 274 KRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYL-GSDEYEQGIINVIQEK 348 (511)
T ss_pred CCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeee-CcHHHHHHHHHHHHHH
Confidence 3445555444333 5677788888765 3322222233333 55544 4477755443211 0111222 22344444
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccC
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGR 150 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~ 150 (289)
+++|. -+.+.++|-|.|||.+-|+.+++... ..++|+--|.
T Consensus 349 L~~Lg-F~~~qLILSGlSMGTfgAlYYga~l~-P~AIiVgKPL 389 (511)
T TIGR03712 349 LDYLG-FDHDQLILSGLSMGTFGALYYGAKLS-PHAIIVGKPL 389 (511)
T ss_pred HHHhC-CCHHHeeeccccccchhhhhhcccCC-CceEEEcCcc
Confidence 55551 03346999999999999999988652 3455544443
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.014 Score=42.08 Aligned_cols=59 Identities=17% Similarity=0.325 Sum_probs=45.8
Q ss_pred CceEEEEEeCCCCccChhhHHHHHhhCCC-----cEEEEEcCCCcccc-cC---chHHHHHHHHHHHh
Q 022960 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPN-----HKLHIIEGADHEFT-SH---QDELASLVIQFIKA 269 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~-~~---~~~~~~~i~~fl~~ 269 (289)
+++.|-|-|+.|.++.+.+.....+.+.+ ...++.+|+||+-. .- .+++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 67888899999999998887776666543 46788899999933 22 26788888888865
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.015 Score=47.38 Aligned_cols=37 Identities=30% Similarity=0.473 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHh
Q 022960 101 AEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 101 ~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
...+..+++..... ...++.+.|||+||.+|+..|..
T Consensus 192 l~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 192 MQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34445555444322 22379999999999999988754
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.016 Score=47.88 Aligned_cols=22 Identities=27% Similarity=0.474 Sum_probs=19.1
Q ss_pred CCceEEEEEeChhHHHHHHHHH
Q 022960 115 GRVITAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~ 136 (289)
...++++.|||+||.+|..++.
T Consensus 282 p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHH
Confidence 4558999999999999998875
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.013 Score=47.19 Aligned_cols=86 Identities=19% Similarity=0.210 Sum_probs=46.2
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccCCCCCCCcc---ccchHHHHHHHHHHHHHHHhcCCce
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNGESEGSFL---YGNYRREAEDLRAIVQDFCAKGRVI 118 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~~~~~---~~~~~~~~~d~~~~i~~l~~~~~~~ 118 (289)
++-.+|+.||+-+ ....+|...+...... +..++.....+ ....... ... ...++++.+.+... .+++
T Consensus 79 ~~HLvVlthGi~~-~~~~~~~~~~~~~~kk~p~~~iv~~g~~~--~~~~T~~Gv~~lG-~Rla~~~~e~~~~~---si~k 151 (405)
T KOG4372|consen 79 PKHLVVLTHGLHG-ADMEYWKEKIEQMTKKMPDKLIVVRGKMN--NMCQTFDGVDVLG-ERLAEEVKETLYDY---SIEK 151 (405)
T ss_pred CceEEEecccccc-ccHHHHHHHHHhhhcCCCcceEeeecccc--chhhccccceeee-cccHHHHhhhhhcc---ccce
Confidence 4458999999988 2222355555555554 33233333332 2211111 111 22234433333333 5789
Q ss_pred EEEEEeChhHHHHHHHHH
Q 022960 119 TAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~ 136 (289)
+.++|||+||.++..+..
T Consensus 152 ISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 152 ISFVGHSLGGLVARYAIG 169 (405)
T ss_pred eeeeeeecCCeeeeEEEE
Confidence 999999999988765433
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.028 Score=45.98 Aligned_cols=20 Identities=35% Similarity=0.380 Sum_probs=18.0
Q ss_pred eEEEEEeChhHHHHHHHHHh
Q 022960 118 ITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~ 137 (289)
++.+.|||+||.+|+..|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 68999999999999998764
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.018 Score=48.09 Aligned_cols=37 Identities=38% Similarity=0.565 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhcC-CceEEEEEeChhHHHHHHHHHh
Q 022960 101 AEDLRAIVQDFCAKG-RVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 101 ~~d~~~~i~~l~~~~-~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
.+++..+++...+.+ ..++.+.|||+||.+|+..|..
T Consensus 301 l~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 301 MEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345555555443321 2369999999999999988754
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.019 Score=47.31 Aligned_cols=22 Identities=27% Similarity=0.489 Sum_probs=18.8
Q ss_pred CCceEEEEEeChhHHHHHHHHH
Q 022960 115 GRVITAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~ 136 (289)
...++++.|||+||.+|..++.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 4458999999999999998765
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.11 Score=44.15 Aligned_cols=61 Identities=11% Similarity=0.333 Sum_probs=47.7
Q ss_pred CceEEEEEeCCCCccChhhHHHHHhhC----CC--------cEEEEEcCCCcccc---cCchHHHHHHHHHHHhhc
Q 022960 211 DCRVLTIHGTKDKMVPAEDALEFDKFI----PN--------HKLHIIEGADHEFT---SHQDELASLVIQFIKANY 271 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~--------~~~~~~~~~gH~~~---~~~~~~~~~i~~fl~~~~ 271 (289)
.-.+++.||..|+++|+..+..+++++ .. .++..+||.+|+.- ..+-+.+..+.+|+++-.
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~ 428 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGK 428 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCC
Confidence 468999999999999998877766543 21 48999999999954 234578999999998644
|
It also includes several bacterial homologues of unknown function. |
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.024 Score=47.35 Aligned_cols=33 Identities=21% Similarity=0.470 Sum_probs=23.7
Q ss_pred HHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHH
Q 022960 104 LRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 104 ~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~ 136 (289)
+...++.+.+. ...++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 44444444333 4458999999999999998874
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.2 Score=39.29 Aligned_cols=119 Identities=18% Similarity=0.143 Sum_probs=76.5
Q ss_pred CCceEEEEEeec-----CCCcEEEEEcCCCCCCCCcchHHHHHH-------------HHHcCccEEEEccc-cCCCCCCC
Q 022960 31 HGEKLVGILHET-----GSKQLVIVCHGFQSTKDRIPMVNLAAA-------------LEREGISAFRFDFS-GNGESEGS 91 (289)
Q Consensus 31 ~g~~l~~~~~~~-----~~~~~iv~~hG~~~~~~~~~~~~~~~~-------------l~~~G~~v~~~d~~-G~G~s~~~ 91 (289)
++..+.++++.. ..+|..+.+.|.++.+... +-.+.+. +.+. ..++.+|-| |.|.|--.
T Consensus 12 ~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG-~GNFeE~GPl~~~~~~r~~TWlk~-adllfvDnPVGaGfSyVd 89 (414)
T KOG1283|consen 12 TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTG-FGNFEELGPLDLDGSPRDWTWLKD-ADLLFVDNPVGAGFSYVD 89 (414)
T ss_pred cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcC-ccchhhcCCcccCCCcCCchhhhh-ccEEEecCCCcCceeeec
Confidence 455666655432 2578889999988765431 2222111 2222 578888877 77766422
Q ss_pred --c-cccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHhCCC----------ccEEEEeccCC
Q 022960 92 --F-LYGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASKYND----------ISIVINISGRF 151 (289)
Q Consensus 92 --~-~~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~----------v~~~v~~~~~~ 151 (289)
. ...+..+.+.|+.++++.+-.. ...+++++.-|+||-+|..++....+ +.++++-+++.
T Consensus 90 g~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 90 GSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred CcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 2 2335567789999999887665 34589999999999999888765321 56777766654
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.034 Score=44.80 Aligned_cols=21 Identities=33% Similarity=0.325 Sum_probs=18.4
Q ss_pred eEEEEEeChhHHHHHHHHHhC
Q 022960 118 ITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
+|.+.|||+||.+|...|...
T Consensus 201 sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 699999999999999887653
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.049 Score=44.53 Aligned_cols=20 Identities=30% Similarity=0.375 Sum_probs=17.9
Q ss_pred eEEEEEeChhHHHHHHHHHh
Q 022960 118 ITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~ 137 (289)
+|.+.|||+||.+|+..|..
T Consensus 216 sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 69999999999999998754
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.15 Score=40.90 Aligned_cols=79 Identities=13% Similarity=0.027 Sum_probs=52.5
Q ss_pred ccEEEEccc-cCCCCCCCcc--ccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHh----C-----
Q 022960 75 ISAFRFDFS-GNGESEGSFL--YGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASK----Y----- 138 (289)
Q Consensus 75 ~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~----~----- 138 (289)
.+++-+|.| |.|-|-.... ..+-...++|+..++..+-+. ...+++|.|-|+||..+-.+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899998 8887754321 112133457777777665444 34579999999999877766653 1
Q ss_pred CC--ccEEEEeccCCcc
Q 022960 139 ND--ISIVINISGRFNL 153 (289)
Q Consensus 139 p~--v~~~v~~~~~~~~ 153 (289)
+. ++|+++-+|+.+.
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 23 7899988886543
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.06 Score=45.10 Aligned_cols=20 Identities=35% Similarity=0.503 Sum_probs=17.9
Q ss_pred eEEEEEeChhHHHHHHHHHh
Q 022960 118 ITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~ 137 (289)
+|.+.|||+||.+|...|..
T Consensus 299 sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 79999999999999997753
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.045 Score=50.33 Aligned_cols=95 Identities=14% Similarity=0.129 Sum_probs=58.1
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCC-CCccccchHHHHHHHHHHHHHHHhc-CCceEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESE-GSFLYGNYRREAEDLRAIVQDFCAK-GRVITA 120 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~-~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~ 120 (289)
.+.|+++|+|..-+.... +..++..| ..|.||.-. ......+++..+... |+.+++. ...+..
T Consensus 2121 se~~~~Ffv~pIEG~tt~--l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~y---irqirkvQP~GPYr 2185 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTA--LESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYY---IRQIRKVQPEGPYR 2185 (2376)
T ss_pred ccCCceEEEeccccchHH--HHHHHhhc----------CCcchhhhccccCCcchHHHHHHHH---HHHHHhcCCCCCee
Confidence 368899999998876532 44444333 233344222 122233444444333 4444433 344789
Q ss_pred EEEeChhHHHHHHHHHhCCC---ccEEEEeccCCc
Q 022960 121 IIGHSKGGNAVLLYASKYND---ISIVINISGRFN 152 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~ 152 (289)
++|+|+|+.++..+|....+ ...+|++++...
T Consensus 2186 l~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred eeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 99999999999998876533 677898887553
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.074 Score=44.73 Aligned_cols=21 Identities=33% Similarity=0.523 Sum_probs=18.5
Q ss_pred ceEEEEEeChhHHHHHHHHHh
Q 022960 117 VITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
-+|.+.|||+||.+|+..|..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 479999999999999998753
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.22 Score=37.58 Aligned_cols=64 Identities=14% Similarity=0.156 Sum_probs=35.8
Q ss_pred CccEEEEccccC-CCCCC---CccccchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC
Q 022960 74 GISAFRFDFSGN-GESEG---SFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 74 G~~v~~~d~~G~-G~s~~---~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
|+.+..+++|.. +--.+ .....+..+-++.+.++|+.... ..++++++|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHH
Confidence 567778888851 11100 11112222223334444433211 456799999999999998877654
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.24 Score=42.42 Aligned_cols=21 Identities=33% Similarity=0.485 Sum_probs=18.3
Q ss_pred ceEEEEEeChhHHHHHHHHHh
Q 022960 117 VITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 379999999999999888764
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.059 Score=45.23 Aligned_cols=19 Identities=32% Similarity=0.434 Sum_probs=17.4
Q ss_pred eEEEEEeChhHHHHHHHHH
Q 022960 118 ITAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~ 136 (289)
+|.+.|||+||.+|...|.
T Consensus 295 sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 295 SITVTGHSLGASLALVSAY 313 (527)
T ss_pred eEEEeccchHHHHHHHHHH
Confidence 7999999999999998875
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.073 Score=44.56 Aligned_cols=21 Identities=33% Similarity=0.479 Sum_probs=18.3
Q ss_pred eEEEEEeChhHHHHHHHHHhC
Q 022960 118 ITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
+|++.|||+||.+|...|...
T Consensus 331 sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 331 SITVTGHSLGAALALLVADEL 351 (509)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 689999999999999877643
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.074 Score=42.66 Aligned_cols=40 Identities=15% Similarity=0.281 Sum_probs=30.1
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCC-----C-ccEEEEeccCCccc
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYN-----D-ISIVINISGRFNLK 154 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p-----~-v~~~v~~~~~~~~~ 154 (289)
+..++.|+|||+|+.+....+.... . |..+++++++....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 5568999999999998876654431 2 78999998876554
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.11 Score=41.82 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHh
Q 022960 101 AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 101 ~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
.+++..++... ..-++.+.|||+||.+|...|..
T Consensus 158 ~~~~~~L~~~~---~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 158 DAELRRLIELY---PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHhc---CCcEEEEecCChHHHHHHHHHHH
Confidence 34444444444 33479999999999999987764
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.22 Score=34.73 Aligned_cols=77 Identities=13% Similarity=0.213 Sum_probs=45.6
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCcc-EEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEE
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGIS-AFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIG 123 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G 123 (289)
...||+.-|++..+.. ...+ ....++. ++++|+.... .++ |+. ..+.+-||.
T Consensus 11 d~LIvyFaGwgtpps~--v~HL---ilpeN~dl~lcYDY~dl~--------ldf-----Dfs---------Ay~hirlvA 63 (214)
T COG2830 11 DHLIVYFAGWGTPPSA--VNHL---ILPENHDLLLCYDYQDLN--------LDF-----DFS---------AYRHIRLVA 63 (214)
T ss_pred CEEEEEEecCCCCHHH--Hhhc---cCCCCCcEEEEeehhhcC--------ccc-----chh---------hhhhhhhhh
Confidence 3478888888877632 2222 2233454 5778886221 111 111 123468999
Q ss_pred eChhHHHHHHHHHhCCCccEEEEecc
Q 022960 124 HSKGGNAVLLYASKYNDISIVINISG 149 (289)
Q Consensus 124 ~S~Gg~~a~~~a~~~p~v~~~v~~~~ 149 (289)
+|||-.+|-+++...+ ++..+.+++
T Consensus 64 wSMGVwvAeR~lqg~~-lksatAiNG 88 (214)
T COG2830 64 WSMGVWVAERVLQGIR-LKSATAING 88 (214)
T ss_pred hhHHHHHHHHHHhhcc-ccceeeecC
Confidence 9999999998776554 566666655
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.15 Score=43.30 Aligned_cols=79 Identities=24% Similarity=0.325 Sum_probs=53.1
Q ss_pred HcCccEEEEccccCCCCCC----CccccchHH-----------HHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHH
Q 022960 72 REGISAFRFDFSGNGESEG----SFLYGNYRR-----------EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 72 ~~G~~v~~~d~~G~G~s~~----~~~~~~~~~-----------~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 136 (289)
.+||.++.-|- ||..+.. ... .+.+. ...-..++++..-.+..+.-+..|.|.||.-++..|.
T Consensus 57 ~~G~A~~~TD~-Gh~~~~~~~~~~~~-~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 57 ARGYATASTDS-GHQGSAGSDDASFG-NNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hcCeEEEEecC-CCCCCccccccccc-CCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHH
Confidence 45899999984 5654432 111 11111 1122233344443346677899999999999999999
Q ss_pred hCCC-ccEEEEeccCCc
Q 022960 137 KYND-ISIVINISGRFN 152 (289)
Q Consensus 137 ~~p~-v~~~v~~~~~~~ 152 (289)
++|+ ++++|.-+|...
T Consensus 135 ryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 135 RYPEDFDGILAGAPAIN 151 (474)
T ss_pred hChhhcCeEEeCCchHH
Confidence 9999 999999998553
|
It also includes several bacterial homologues of unknown function. |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.36 Score=38.79 Aligned_cols=59 Identities=19% Similarity=0.249 Sum_probs=45.9
Q ss_pred CceEEEEEeCCCCccChhhHHHHHhhCC------------------------C-cEEEEEcCCCcccccCchHHHHHHHH
Q 022960 211 DCRVLTIHGTKDKMVPAEDALEFDKFIP------------------------N-HKLHIIEGADHEFTSHQDELASLVIQ 265 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~i~~ 265 (289)
.++||+..|+.|-+|+.-..+.+.+.+. + .++..+.++||.....|+...+.+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 5799999999999999877776655542 1 34566778999976677888889999
Q ss_pred HHHh
Q 022960 266 FIKA 269 (289)
Q Consensus 266 fl~~ 269 (289)
|+..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 9854
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.26 Score=32.55 Aligned_cols=28 Identities=14% Similarity=0.204 Sum_probs=16.2
Q ss_pred CCceEEEEEeecC--CCcEEEEEcCCCCCC
Q 022960 31 HGEKLVGILHETG--SKQLVIVCHGFQSTK 58 (289)
Q Consensus 31 ~g~~l~~~~~~~~--~~~~iv~~hG~~~~~ 58 (289)
+|..++.....+. +..+||++||++++-
T Consensus 76 ~g~~iHFih~rs~~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 76 DGLDIHFIHVRSKRPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp TTEEEEEEEE--S-TT-EEEEEE--SS--G
T ss_pred eeEEEEEEEeeCCCCCCeEEEEECCCCccH
Confidence 5888886554433 566999999999986
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function | Back alignment and domain information |
|---|
Probab=92.85 E-value=1.6 Score=34.35 Aligned_cols=94 Identities=19% Similarity=0.305 Sum_probs=53.6
Q ss_pred CcEEEEEcCCCCCCCCcc----hHHHHHHH-HHcCccEEEEccccCCCC--------CCCc---cccch-HHHHHHHHHH
Q 022960 45 KQLVIVCHGFQSTKDRIP----MVNLAAAL-EREGISAFRFDFSGNGES--------EGSF---LYGNY-RREAEDLRAI 107 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~----~~~~~~~l-~~~G~~v~~~d~~G~G~s--------~~~~---~~~~~-~~~~~d~~~~ 107 (289)
+..|||+-|.+.+..... ...+.+.+ ...+-..+.+=.+|-|.. .... ....+ ....+.+..+
T Consensus 1 k~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~a 80 (277)
T PF09994_consen 1 KRIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDA 80 (277)
T ss_pred CcEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHH
Confidence 356788888776654311 23444555 222335566667787771 1100 00011 1223445555
Q ss_pred HHHHHhc--CCceEEEEEeChhHHHHHHHHHhC
Q 022960 108 VQDFCAK--GRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 108 i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
..++.+. ..++|.++|+|-|++.|-.++..-
T Consensus 81 y~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 81 YRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 5555443 556899999999999999988654
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=91.97 E-value=0.27 Score=37.80 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=23.9
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCCCccEEEEecc
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYNDISIVINISG 149 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~ 149 (289)
...++.|.|||+||.+|..+..++. +-.+.+-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 3448999999999999998777653 333443343
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.97 E-value=0.27 Score=37.80 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=23.9
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCCCccEEEEecc
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYNDISIVINISG 149 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~ 149 (289)
...++.|.|||+||.+|..+..++. +-.+.+-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 3448999999999999998777653 333443343
|
|
| >PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins | Back alignment and domain information |
|---|
Probab=90.70 E-value=1.8 Score=29.24 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=25.5
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCc
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGI 75 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~ 75 (289)
.+++|.|+-+||+.|.+.++.-+-+++.|-..|.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhccc
Confidence 3478999999999999977555566777666553
|
Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins ( |
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=90.32 E-value=1.2 Score=36.50 Aligned_cols=36 Identities=28% Similarity=0.381 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHH
Q 022960 101 AEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 101 ~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~ 136 (289)
...+.+++++|..+ +.++++|.|.|.||.-++..+.
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 35677888888665 4578999999999998877554
|
|
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=90.27 E-value=0.79 Score=38.35 Aligned_cols=114 Identities=13% Similarity=0.005 Sum_probs=61.6
Q ss_pred EEEEEeecC----CCcEEEEEcCCCCCCCCc-chHHHHHHHHHcC-ccEEEEccc----cC---CCCCCCccccchHHHH
Q 022960 35 LVGILHETG----SKQLVIVCHGFQSTKDRI-PMVNLAAALEREG-ISAFRFDFS----GN---GESEGSFLYGNYRREA 101 (289)
Q Consensus 35 l~~~~~~~~----~~~~iv~~hG~~~~~~~~-~~~~~~~~l~~~G-~~v~~~d~~----G~---G~s~~~~~~~~~~~~~ 101 (289)
|+..++.|. +..++|++-|+|.-..+. .--.=.+.|+..+ .-|+.+++| |+ +.....+....+
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl---- 196 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGL---- 196 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccch----
Confidence 444445442 455888888877544321 1112234555543 445667776 21 122222233332
Q ss_pred HHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCCC----ccEEEEeccCCcc
Q 022960 102 EDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYND----ISIVINISGRFNL 153 (289)
Q Consensus 102 ~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~~ 153 (289)
-|-.-+++|++++ +.+++.|+|.|.|+.-...-+.. |. ++..|+-++....
T Consensus 197 ~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLls-P~S~glF~raIlQSGS~~~ 257 (601)
T KOG4389|consen 197 LDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLS-PGSRGLFHRAILQSGSLNN 257 (601)
T ss_pred HHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecC-CCchhhHHHHHhhcCCCCC
Confidence 2334456666655 57799999999998654432221 22 7777777775543
|
|
| >PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised | Back alignment and domain information |
|---|
Probab=89.92 E-value=6.8 Score=32.40 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=61.9
Q ss_pred EEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-----------------------ccchHHHHHH
Q 022960 47 LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-----------------------YGNYRREAED 103 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-----------------------~~~~~~~~~d 103 (289)
.|+++ |...++.. .+..+.+.+.+.|..++.+|.-=.+....... ......+.+-
T Consensus 3 tI~ii-gT~DTK~~-E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~g 80 (403)
T PF06792_consen 3 TIAII-GTLDTKGE-ELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARG 80 (403)
T ss_pred EEEEE-EccCCCHH-HHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHH
Confidence 34444 54555442 47778888999999999999754444332100 0111223344
Q ss_pred HHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEE
Q 022960 104 LRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVI 145 (289)
Q Consensus 104 ~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v 145 (289)
+..++..+..+ .+.-++-+|-|.|..++...+...|- +-+++
T Consensus 81 a~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlm 124 (403)
T PF06792_consen 81 AARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLM 124 (403)
T ss_pred HHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEE
Confidence 55555555443 46678999999999999999988876 55554
|
|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.76 E-value=4.7 Score=29.13 Aligned_cols=40 Identities=23% Similarity=0.247 Sum_probs=33.9
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEcc
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDF 82 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 82 (289)
+.++.+|++-|+.+++.+-.-..+.+.|.+.|++++..|=
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 4678999999999988765667788889999999999983
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.68 E-value=0.94 Score=38.84 Aligned_cols=51 Identities=22% Similarity=0.132 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhC-----CC-------ccEEEEeccC
Q 022960 100 EAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKY-----ND-------ISIVINISGR 150 (289)
Q Consensus 100 ~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~-----p~-------v~~~v~~~~~ 150 (289)
.+.-..++++.+... +..+++.+||||||.++-.++... |+ -+++|+++.+
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 344455666666555 355899999999998886665432 32 4677777654
|
|
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=89.14 E-value=4.4 Score=26.18 Aligned_cols=82 Identities=18% Similarity=0.203 Sum_probs=50.7
Q ss_pred chHHHHHHHHHcCccEEEEccccCCCCCCCccccch-HHHHHHHHHHHHHHHhcCCceEEEEEeChhH--HHHHHHHHhC
Q 022960 62 PMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNY-RREAEDLRAIVQDFCAKGRVITAIIGHSKGG--NAVLLYASKY 138 (289)
Q Consensus 62 ~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~-~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg--~~a~~~a~~~ 138 (289)
.+..+.+.+..+|+-.=.+.++..|.+....-...- +.-...+..+++.. ...++++||-|--. -+-..++.++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f---P~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF---PERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC---CCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 366677777777887777777777554322211111 12234555555555 55689999999665 3344567788
Q ss_pred CC-ccEEEE
Q 022960 139 ND-ISIVIN 146 (289)
Q Consensus 139 p~-v~~~v~ 146 (289)
|+ |.++.+
T Consensus 89 P~~i~ai~I 97 (100)
T PF09949_consen 89 PGRILAIYI 97 (100)
T ss_pred CCCEEEEEE
Confidence 98 777653
|
|
| >COG3673 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.49 E-value=11 Score=30.04 Aligned_cols=93 Identities=19% Similarity=0.200 Sum_probs=57.5
Q ss_pred CCcEEEEEcCCCC----CCCCcchHHHHHHHHH-cCccEEEEccccCCCCCCCc--------c---cc-ch-HHHHHHHH
Q 022960 44 SKQLVIVCHGFQS----TKDRIPMVNLAAALER-EGISAFRFDFSGNGESEGSF--------L---YG-NY-RREAEDLR 105 (289)
Q Consensus 44 ~~~~iv~~hG~~~----~~~~~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~--------~---~~-~~-~~~~~d~~ 105 (289)
.+..|+++-|... ..-. -...+...|.. .+..++++--+|.|.-.-.. . .. .+ ......+.
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~T-NVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPT-NVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred cceEEEEecCchhhcCCCCcc-hHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 5667788877432 2211 13445566665 47888888888887653111 0 00 00 22345566
Q ss_pred HHHHHHHhc--CCceEEEEEeChhHHHHHHHHHh
Q 022960 106 AIVQDFCAK--GRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 106 ~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
.+...|... ..++|+++|+|-|+++|--+|..
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 666666555 45689999999999999877764
|
|
| >PRK02399 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.25 E-value=10 Score=31.34 Aligned_cols=96 Identities=19% Similarity=0.158 Sum_probs=60.1
Q ss_pred EEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-------------------c----ccchHHHHHHHH
Q 022960 49 IVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-------------------L----YGNYRREAEDLR 105 (289)
Q Consensus 49 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-------------------~----~~~~~~~~~d~~ 105 (289)
|++=|...++.. .+..+.+.+.+.|..|+.+|.-..|...... . ......+.+-+.
T Consensus 6 I~iigT~DTK~~-E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 84 (406)
T PRK02399 6 IYIAGTLDTKGE-ELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAA 84 (406)
T ss_pred EEEEeccCCcHH-HHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHH
Confidence 444465655543 4667788888889999999984443211000 0 001122334445
Q ss_pred HHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEE
Q 022960 106 AIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVI 145 (289)
Q Consensus 106 ~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v 145 (289)
.++..|.++ .+.-++-+|-|.|..++...+...|- +-+++
T Consensus 85 ~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlm 126 (406)
T PRK02399 85 AFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLM 126 (406)
T ss_pred HHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEE
Confidence 555544444 57778999999999999999888886 55554
|
|
| >COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=88.19 E-value=2.7 Score=31.09 Aligned_cols=62 Identities=18% Similarity=0.287 Sum_probs=42.3
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCc-cEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGI-SAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAII 122 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~ 122 (289)
...+|+++||...++.. .|..+-..|.+.|| .|+....-|+ -++..+++++++++.+.+.|+
T Consensus 137 ~e~~vlmgHGt~h~s~~-~YacLd~~~~~~~f~~v~v~~ve~y----------------P~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 137 DEILVLMGHGTDHHSNA-AYACLDHVLDEYGFDNVFVAAVEGY----------------PLVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred CeEEEEEecCCCccHHH-HHHHHHHHHHhcCCCceEEEEecCC----------------CcHHHHHHHHHHcCCceEEEe
Confidence 34588899998887754 45666666777788 5665554432 245667888888888777665
|
|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=85.00 E-value=5.3 Score=28.24 Aligned_cols=39 Identities=23% Similarity=0.255 Sum_probs=30.1
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccc
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFS 83 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 83 (289)
++.+|++-|..+++.+-.-..+.+.|.+.|+.++.+|-.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 478999999999886555667778888889999999743
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B .... |
| >PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=84.26 E-value=8.9 Score=29.99 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=27.1
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCC---C-ccEEEEeccCCc
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYN---D-ISIVINISGRFN 152 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~ 152 (289)
...+++|.|.|+|++-+...-.... . +++.+..+++..
T Consensus 107 ~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 107 RRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred cCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 4458999999999987665433222 2 889998887654
|
|
| >cd07198 Patatin Patatin-like phospholipase | Back alignment and domain information |
|---|
Probab=83.97 E-value=1.9 Score=31.11 Aligned_cols=34 Identities=26% Similarity=0.399 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCC
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYN 139 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 139 (289)
-+++.|.++++..-.+.|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 3455565657766799999999999999888654
|
Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family. |
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=83.41 E-value=4.1 Score=24.60 Aligned_cols=40 Identities=18% Similarity=0.201 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHhC
Q 022960 99 REAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
-....+.+.+++.+.+ +.+++.++|-|-|=.+|.+.++.+
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 3356677777777664 668999999999999998887765
|
|
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.04 E-value=4.1 Score=34.54 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=31.3
Q ss_pred CCceEEEEEeChhHHHHHHHHHh---CCC---ccEEEEeccCCccccc
Q 022960 115 GRVITAIIGHSKGGNAVLLYASK---YND---ISIVINISGRFNLKRG 156 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~---~p~---v~~~v~~~~~~~~~~~ 156 (289)
+..+|.|||+|+|+.+....+.. ..+ |..+++++.+......
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 77899999999999987755442 222 7889999887665543
|
|
| >cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7 | Back alignment and domain information |
|---|
Probab=82.15 E-value=2.2 Score=34.01 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=26.1
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
-+++.|.+.++..-.++|.|+|+.++..++...
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 445666666776669999999999999998764
|
Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE |
| >cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2 | Back alignment and domain information |
|---|
Probab=81.93 E-value=2.5 Score=31.09 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=25.6
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
.+++.|.+.+...-.++|.|.||.+|..++...
T Consensus 16 Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 455566555666669999999999999988754
|
ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona |
| >PRK10279 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=81.84 E-value=2.2 Score=33.92 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=26.3
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
-+++.|.+.++..-.++|.|+|+.++..+|...
T Consensus 22 GVL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 22 GVINALKKVGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 345666666777779999999999999998754
|
|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=81.26 E-value=25 Score=29.23 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=28.3
Q ss_pred EEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCC
Q 022960 48 VIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGE 87 (289)
Q Consensus 48 iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 87 (289)
|+|+|...-.. |+.+++.|.++|+.|..+-..+.+.
T Consensus 2 il~~~~~~p~~----~~~la~~L~~~G~~v~~~~~~~~~~ 37 (396)
T cd03818 2 ILFVHQNFPGQ----FRHLAPALAAQGHEVVFLTEPNAAP 37 (396)
T ss_pred EEEECCCCchh----HHHHHHHHHHCCCEEEEEecCCCCC
Confidence 78888766543 7899999999999998876665544
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes | Back alignment and domain information |
|---|
Probab=80.92 E-value=3.1 Score=31.41 Aligned_cols=33 Identities=27% Similarity=0.248 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
-+++.|.+.+...-.++|.|.|+.++..++...
T Consensus 17 GvL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 17 GFLAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 345555555666668999999999999988754
|
Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 289 | ||||
| 3pf8_A | 270 | Crystal Structure Of The Lactobacillus Johnsonii Ci | 9e-16 | ||
| 3pf9_A | 270 | Crystal Structure Of The Lactobacillus Johnsonii Ci | 2e-15 | ||
| 3qm1_A | 265 | Crystal Structure Of The Lactobacillus Johnsonii Ci | 6e-15 | ||
| 2wtm_A | 251 | Est1e From Butyrivibrio Proteoclasticus Length = 25 | 1e-09 | ||
| 3llc_A | 270 | Crystal Structure Of Putative Hydrolase (Yp_0025481 | 2e-06 | ||
| 2fuk_A | 220 | Crystal Structure Of Xc6422 From Xanthomonas Campes | 2e-04 | ||
| 1brt_A | 277 | Bromoperoxidase A2 Mutant M99t Length = 277 | 2e-04 | ||
| 1bro_A | 277 | Bromoperoxidase A2 Length = 277 | 3e-04 | ||
| 1a7u_A | 277 | Chloroperoxidase T Length = 277 | 4e-04 | ||
| 3bdi_A | 207 | Crystal Structure Of Predicted Cib-Like Hydrolase ( | 7e-04 | ||
| 1a8s_A | 273 | Chloroperoxidase FPROPIONATE COMPLEX Length = 273 | 7e-04 |
| >pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl Esterase Lj0536 Length = 270 | Back alignment and structure |
|
| >pdb|3PF9|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl Esterase Lj0536 S106a Mutant Length = 270 | Back alignment and structure |
|
| >pdb|3QM1|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl Esterase Lj0536 S106a Mutant In Complex With Ethylferulate, Form Ii Length = 265 | Back alignment and structure |
|
| >pdb|2WTM|A Chain A, Est1e From Butyrivibrio Proteoclasticus Length = 251 | Back alignment and structure |
|
| >pdb|3LLC|A Chain A, Crystal Structure Of Putative Hydrolase (Yp_002548124.1) From Agrobacterium Vitis S4 At 1.80 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|2FUK|A Chain A, Crystal Structure Of Xc6422 From Xanthomonas Campestris: A Member Of AB SERINE HYDROLASE WITHOUT LID AT 1.6 Resolution Length = 220 | Back alignment and structure |
|
| >pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t Length = 277 | Back alignment and structure |
|
| >pdb|1BRO|A Chain A, Bromoperoxidase A2 Length = 277 | Back alignment and structure |
|
| >pdb|1A7U|A Chain A, Chloroperoxidase T Length = 277 | Back alignment and structure |
|
| >pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase (Np_393672.1) From Thermoplasma Acidophilum At 1.45 A Resolution Length = 207 | Back alignment and structure |
|
| >pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX Length = 273 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 225 bits (574), Expect = 3e-73
Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 13/275 (4%)
Query: 1 MSVTRPTQSYRQGFQQDPVVQRRRVVIPNSHGEKLVGILHETGSKQ--LVIVCHGFQSTK 58
M + + G +++ Q + G +LVG E + + I+ HGF + +
Sbjct: 1 MGSSHHHHHHSSG-RENLYFQGMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANR 59
Query: 59 DRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVI 118
+ + +A +L E I++ RFDF+G+G+S+G F E ED AI+ V
Sbjct: 60 NTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVR 119
Query: 119 -TAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID 176
++GH++GG + A Y D I V+ ++ LK G
Sbjct: 120 NIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDH----- 174
Query: 177 VRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKF 236
+ ++ + + L I+ V IHGT D +V + ++D+
Sbjct: 175 IPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQF--TKPVCLIHGTDDTVVSPNASKKYDQI 232
Query: 237 IPNHKLHIIEGADHEFT-SHQDELASLVIQFIKAN 270
N LH+IEGADH F+ S+Q +L F++ N
Sbjct: 233 YQNSTLHLIEGADHCFSDSYQKNAVNLTTDFLQNN 267
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 221 bits (566), Expect = 3e-72
Identities = 56/251 (22%), Positives = 96/251 (38%), Gaps = 12/251 (4%)
Query: 26 VIPNSHGEKLVGILH----ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFD 81
+ + G KL L L I+ HGF + +V + L G++ R D
Sbjct: 4 MYIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRAD 63
Query: 82 FSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVI-TAIIGHSKGGNAVLLYASKYND 140
G+G+S+G F + ++ A+V V + GHS+GG +V+L A+ D
Sbjct: 64 MYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERD 123
Query: 141 -ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST 199
I +I +S + R G + D + ++ + +
Sbjct: 124 IIKALIPLSPAAMIPE--IARTGELLGLKFDPENIPDELDAWD--GRKLKGNYVRVAQTI 179
Query: 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDEL 259
+ VL +HG +D+ VP E ++ F K N KL I G H + H + +
Sbjct: 180 RVEDFVDKY--TKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCYDHHLELV 237
Query: 260 ASLVIQFIKAN 270
V +F+
Sbjct: 238 TEAVKEFMLEQ 248
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 178 bits (452), Expect = 1e-54
Identities = 48/254 (18%), Positives = 82/254 (32%), Gaps = 12/254 (4%)
Query: 25 VVIPNSHGEKLVGIL-----HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFR 79
V+ ++G++L + +++ GF D LA L G FR
Sbjct: 10 HVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDH--FAGLAEYLSTNGFHVFR 67
Query: 80 FDFSGN-GESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY 138
+D + G S GS L + KG +I S S
Sbjct: 68 YDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDL 127
Query: 139 NDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLS 198
++S +I G NL+ +E LG YL D+ + KL V +
Sbjct: 128 -ELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHW 186
Query: 199 TDIHAACHMICQ-DCRVLTIHGTKDKMVPAEDALEFDKFIPNH--KLHIIEGADHEFTSH 255
+ + + ++ D V E+ + I KL+ + G+ H+ +
Sbjct: 187 DTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGEN 246
Query: 256 QDELASLVIQFIKA 269
L + KA
Sbjct: 247 LVVLRNFYQSVTKA 260
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 167 bits (423), Expect = 9e-51
Identities = 54/268 (20%), Positives = 98/268 (36%), Gaps = 19/268 (7%)
Query: 15 QQDPVVQRRRVVIPNSHGEKLVGILHETGSKQ--LVIVCHGFQSTKDRIPMVNLAAALER 72
P+ V S + ++ + I G++S + +
Sbjct: 5 VGRPIETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAAS 64
Query: 73 EGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVL 132
G+ A RFD+SG+G S G+F G R E+ A++ D + I ++G S GG L
Sbjct: 65 LGVGAIRFDYSGHGASGGAFRDGTISRWLEEALAVL-DHFKPEKAI--LVGSSMGGWIAL 121
Query: 133 LYASKYNDIS--------IVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKL 184
+ +V+ IE LG + +NG+ + ++
Sbjct: 122 RLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELAENGYFEEVSEYSPE 181
Query: 185 EYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHK--L 242
T+ + D + + A I C V + G D VP + AL+ + +P L
Sbjct: 182 PNIFTRALMEDGRANRVMAGM--IDTGCPVHILQGMADPDVPYQHALKLVEHLPADDVVL 239
Query: 243 HIIEGADHEFTSHQD--ELASLVIQFIK 268
++ DH + QD + + + I+
Sbjct: 240 TLVRDGDHRLSRPQDIDRMRNAIRAMIE 267
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 7e-39
Identities = 43/259 (16%), Positives = 80/259 (30%), Gaps = 34/259 (13%)
Query: 20 VQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFR 79
+ + IP ++L G L V+ HG+ ++ + A G
Sbjct: 4 AKLSSIEIP-VGQDELSGTLLTPTGMPGVLFVHGWGGSQHH--SLVRAREAVGLGCICMT 60
Query: 80 FDFSGNGESEGSFLYGNYRREAEDLRAIV-----QDFCAKGRVITAIIGHSKGGNAVLLY 134
FD G+ + +D++A + + A++G S GG L
Sbjct: 61 FDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSI--AVVGLSYGGYLSALL 118
Query: 135 ASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLM 194
+ + + S Y + + ++YR +
Sbjct: 119 TRER-PVEWLALRSPAL-------------YKDAHWDQPKVSLNADPDLMDYRRRALAPG 164
Query: 195 DRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHK---LHIIEGADHE 251
D L+ + A VL + D +VP + N + +I GADH
Sbjct: 165 DNLA--LAACAQY---KGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHA 219
Query: 252 FTS--HQDELASLVIQFIK 268
+ HQ E +I ++
Sbjct: 220 LSVKEHQQEYTRALIDWLT 238
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 4e-26
Identities = 38/236 (16%), Positives = 84/236 (35%), Gaps = 14/236 (5%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
++ V++ HGF + L LE +G + + G+G ++ +
Sbjct: 14 AGERAVLLLHGFTGNSAD--VRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQ 71
Query: 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYN-DISIVINISGRFNLKRGIEGRL 161
D+ + KG A+ G S GG L + + + + + +
Sbjct: 72 DVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGV 131
Query: 162 GLGYLQR-IKQNGFIDVRNKKGKLEYRVTQESL---MDRLSTDIHAACHMICQDCRVLTI 217
L Y + K+ G + + ++ +++ T + L D+ +I +
Sbjct: 132 -LEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLI--YAPTFVV 188
Query: 218 HGTKDKMVPAEDALEFDKFI--PNHKLHIIEGADHEFT--SHQDELASLVIQFIKA 269
D+M+ + A I P ++ E + H T +D+L + F+++
Sbjct: 189 QARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLES 244
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 7e-26
Identities = 46/239 (19%), Positives = 79/239 (33%), Gaps = 15/239 (6%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99
+ V++ HGF T M LA A + G + G+G +
Sbjct: 35 YAENGPVGVLLVHGFTGTPHS--MRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHD 92
Query: 100 EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEG 159
+ + + I + G S GG L A + DI ++ I+ ++ G
Sbjct: 93 WVASVEEGYGWLKQRCQTI-FVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAG 151
Query: 160 RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESL-----MDRLSTDIHAACHMICQDCRV 214
G G L R + D++N K E + + RL A I C
Sbjct: 152 MTGGGELPRYLDSIGSDLKNPDVK-ELAYEKTPTASLLQLARLMAQTKAKLDRI--VCPA 208
Query: 215 LTIHGTKDKMVPAEDALEFDKFI--PNHKLHIIEGADHEFTSH--QDELASLVIQFIKA 269
L +D +VP +A + I ++ + + H T Q + ++F
Sbjct: 209 LIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAK 267
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 3e-25
Identities = 42/289 (14%), Positives = 89/289 (30%), Gaps = 31/289 (10%)
Query: 5 RPTQSYRQGFQQDPVVQRRRVVIPNSHGEKLVGILH---ETGSKQLVIVCHGFQSTKDRI 61
R + Y++ R + G + + G VI+ G +STK+
Sbjct: 111 RKVELYQKAAPLLSP-PAERHELV-VDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEE- 167
Query: 62 PMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVIT-- 119
+ + G++ FD G GE + A+V +
Sbjct: 168 -SFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYE--KYTSAVVDLLTKLEAIRNDA 224
Query: 120 -AIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKR-GIEGRLGLGYLQRIKQNGFIDV 177
++G S GGN L A+ ++ I+ G +L +E L + + + ++
Sbjct: 225 IGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEE 284
Query: 178 RNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI 237
+ + + ++ +++ C +HG D VP + +
Sbjct: 285 --ARLHVHAALETRDVLSQIA-------------CPTYILHGVHD-EVPLSFVDTVLELV 328
Query: 238 PNHK--LHIIEGADHEFTSHQDELASLVIQFIKANYQKDGPTSKRADGT 284
P L + + DH + + ++ + G
Sbjct: 329 PAEHLNLVVEKDGDHCCHNLGIRPRLEMADWLYDVLVAGKKVAPTMKGW 377
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 93.5 bits (232), Expect = 2e-23
Identities = 34/226 (15%), Positives = 70/226 (30%), Gaps = 53/226 (23%)
Query: 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAED 103
S+ I+ HGF+S D + + LA ER G + R DF+ G+ R +
Sbjct: 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQR 62
Query: 104 LRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGL 163
L I + KG V+ + G S G + + +
Sbjct: 63 LLEIARAATEKGPVV--LAGSSLGSYIAAQVSL-----------------QVPTRALFLM 103
Query: 164 GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDK 223
T + + + +H D+
Sbjct: 104 VP--------------------------------PTKMGPLPALDAAAVPISIVHAWHDE 131
Query: 224 MVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269
++PA D + + + + +L +++ H +H + + +++
Sbjct: 132 LIPAADVIAWAQ-ARSARLLLVDD-GHRLGAHVQAASRAFAELLQS 175
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 1e-22
Identities = 47/233 (20%), Positives = 84/233 (36%), Gaps = 13/233 (5%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS--FLYGNYRRE 100
G+ V++ H + + + M +A AL+R G + FSG+G E GN
Sbjct: 20 GTDTGVVLLHAYTGSPND--MNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIW 77
Query: 101 AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGR 160
+ A V AK + + G S GG + I+ S +
Sbjct: 78 WAESSAAVAHMTAKYAKV-FVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVP 136
Query: 161 LGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGT 220
L Y + + + + + L Y Q + +D+ +T + A +++
Sbjct: 137 GFLKYAEYMNRLAGKSDESTQ-ILAYLPGQLAAIDQFATTVAADLNLV--KQPTFIGQAG 193
Query: 221 KDKMVPAEDALEFDKFIPNH---KLHIIEGADHEFT--SHQDELASLVIQFIK 268
+D++V A + + N H + A H T S L VI F++
Sbjct: 194 QDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQ 246
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 87.1 bits (215), Expect = 9e-20
Identities = 49/300 (16%), Positives = 86/300 (28%), Gaps = 58/300 (19%)
Query: 4 TRPTQSYRQGFQQDPVVQRRRVVIPNSHGEKLVGILH----ETGSKQ-LVIVCHGFQSTK 58
+ TQ + + F V+ R+V N +G L L+ G + +++ F + K
Sbjct: 50 LQLTQEWDKTFPLSAKVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVK 109
Query: 59 DRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY-GNYRREAEDLRAIV-----QDFC 112
+ A + G FD S GES G + ED A V
Sbjct: 110 E-QSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVDFISLLPEV 168
Query: 113 AKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFN---LKRGIEGRLGLGYLQRI 169
+ R+ +IG G L + + V+ + + +G + L R
Sbjct: 169 NRERI--GVIGICGWGGMALNAVAVDKRVKAVVTSTMYDMTRVMSKGYNDSVTLEQRTRT 226
Query: 170 KQNGFID--VRNKKGKLEY-------------------------------------RVTQ 190
+ + G Y T
Sbjct: 227 LEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTM 286
Query: 191 ESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH 250
+ + ++ I I +L IHG + + + +L I+ GA H
Sbjct: 287 TTPLSFMNMPILTYIKEIS-PRPILLIHGERAHSRYFSETA-YAAAAEPKELLIVPGASH 344
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 87.0 bits (215), Expect = 1e-19
Identities = 42/272 (15%), Positives = 88/272 (32%), Gaps = 19/272 (6%)
Query: 4 TRPTQSYRQGFQQDPVVQRRRVVIPNSHGEKLVGILH---ETGSKQLVIVCHGFQSTKDR 60
+Y + ++ +++ IP K+ LH +VIV G S +
Sbjct: 151 VLANSAYLEAAKKSKY-IIKQLEIP-FEKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTD 208
Query: 61 IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVI-- 118
+ + L + I+ D G S L +Y R +A++ + + V
Sbjct: 209 MWRL-FRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSR---LHQAVLNELFSIPYVDHH 264
Query: 119 -TAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID 176
+IG GGNA++ + + I + + + +L + ++ +
Sbjct: 265 RVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQ--MPKMYLDVLAS 322
Query: 177 VRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKF 236
K Y ++ + L + +L + D + P D F
Sbjct: 323 RLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKT--KVPILAMSLEGDPVSPYSDNQMVAFF 380
Query: 237 IPNHKLHIIEGADHEFTSHQDELASLVIQFIK 268
K I T ++ L I++++
Sbjct: 381 STYGKAKKISS--KTITQGYEQSLDLAIKWLE 410
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 84.2 bits (208), Expect = 1e-19
Identities = 47/260 (18%), Positives = 76/260 (29%), Gaps = 65/260 (25%)
Query: 20 VQRRRVVIPNSHGEKLVGILHE-TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAF 78
Q V + KL G L G+ +V+ HG S++ +A L++ G++
Sbjct: 10 PQEYAVSVS-VGEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATL 68
Query: 79 RFDFSGNGESEGSFLYGNYR----REAEDLRAIV-----QDFCAKGRVITAIIGHSKGGN 129
D E E + R A L +V G S GG
Sbjct: 69 LIDLLTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKV--GYFGASTGGG 126
Query: 130 AVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRV 188
A L+ A++ + + V++ GR L L +
Sbjct: 127 AALVAAAERPETVQAVVSRGGRP--------DLAPSALPHV------------------- 159
Query: 189 TQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGA 248
L I G D V A + ++ + +L II A
Sbjct: 160 ----------------------KAPTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRA 197
Query: 249 DHEFTS--HQDELASLVIQF 266
H F +A L ++
Sbjct: 198 SHLFEEPGALTAVAQLASEW 217
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 79.4 bits (195), Expect = 1e-17
Identities = 42/259 (16%), Positives = 81/259 (31%), Gaps = 51/259 (19%)
Query: 33 EKLVGI--LHET--GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGES 88
L G+ L K L++ HG Q +K+ ++ L G FD +GE
Sbjct: 8 LTLAGLSVLARIPEAPKALLLALHGLQGSKEH--ILALLPGYAERGFLLLAFDAPRHGER 65
Query: 89 EGSFLYGNYRREAEDLRAIVQDFCAKGRVI-----------TAIIGHSKGGNAVLLYASK 137
EG R E++ + F + R + + G S G L ++
Sbjct: 66 EGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAE 125
Query: 138 YNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL 197
V+ G G+ ++ Q + + Y+ + +
Sbjct: 126 GFRPRGVLAFIGS-------------GFPMKLPQGQVV--EDPGVLALYQAPPATRGEAY 170
Query: 198 STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI------PNHKLHIIEGADHE 251
+L +HG++D +VP + + + + EGA H
Sbjct: 171 G------------GVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHT 218
Query: 252 FT-SHQDELASLVIQFIKA 269
T + + +++A
Sbjct: 219 LTPLMARVGLAFLEHWLEA 237
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} Length = 208 | Back alignment and structure |
|---|
Score = 76.2 bits (187), Expect = 8e-17
Identities = 42/250 (16%), Positives = 83/250 (33%), Gaps = 58/250 (23%)
Query: 25 VVIPNSHGEKLVGILH---ETGSKQLVIVCHGFQS---TKDRIPMVNLAAALEREGISAF 78
+I G +L ++ I+CH T + + LA AL+ G+
Sbjct: 9 FLIQGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTV 67
Query: 79 RFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY 138
RF+F G G+S+G Y N E EDL+A+++ + G + +
Sbjct: 68 RFNFRGVGKSQGR--YDNGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVAYD 125
Query: 139 NDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLS 198
++ +I+++ + L ++
Sbjct: 126 QKVAQLISVAPPVFYEG-------FASLTQMA---------------------------- 150
Query: 199 TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE-FDKFIPNHKLHIIEGADHEFTSHQD 257
L + G +D++VP E ++ + ++ GA H F
Sbjct: 151 -------------SPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGRLI 197
Query: 258 ELASLVIQFI 267
EL L+++ +
Sbjct: 198 ELRELLVRNL 207
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 1e-15
Identities = 39/202 (19%), Positives = 70/202 (34%), Gaps = 17/202 (8%)
Query: 80 FDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITA-IIGHSKGGNAVLLYASKY 138
D G+GES+G Y +++ + + +IG+S GG VL A K
Sbjct: 47 LDLKGHGESKGQCPSTVYGY-IDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVALKK 105
Query: 139 ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL 197
+ V+++SG + + + Y ++ N ++ E+L
Sbjct: 106 LPNVRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKYFETL--EK 163
Query: 198 STDIHAACHMICQ-----------DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIE 246
DI + C+ D V I + + E + K + N +L I E
Sbjct: 164 DPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENSELKIFE 223
Query: 247 GADHE-FTSHQDELASLVIQFI 267
H + +A + FI
Sbjct: 224 TGKHFLLVVNAKGVAEEIKNFI 245
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 2e-15
Identities = 47/244 (19%), Positives = 88/244 (36%), Gaps = 21/244 (8%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESE---GSFLYGN 96
+TG ++ L ++ + +D G G S F
Sbjct: 17 QQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADF 76
Query: 97 YRREAEDLRAIVQ--DFCAKGRVITAIIGHSKGGNAVLLYASKYND-IS--IVINISGRF 151
+ R+A+D +++ F +V +++G S GG L+ A+KY I ++ +
Sbjct: 77 FERDAKDAVDLMKALKF---KKV--SLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYV 131
Query: 152 NLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQD 211
+ + G+ + + + + G + T E +D + H IC+
Sbjct: 132 TDEDSMIYE-GIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRH 190
Query: 212 ------CRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVI 264
C L +HG KD +VP A K + +LH++ H DE L
Sbjct: 191 LLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAE 250
Query: 265 QFIK 268
F++
Sbjct: 251 DFLQ 254
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 Length = 220 | Back alignment and structure |
|---|
Score = 71.9 bits (175), Expect = 3e-15
Identities = 37/258 (14%), Positives = 69/258 (26%), Gaps = 61/258 (23%)
Query: 20 VQRRRVVIPNSHGEKLVGILH-----ETGSKQLVIVCHGFQS---TKDRIPMVNLAAALE 71
+ + + G L + IVCH + + + A AL
Sbjct: 8 TESAALTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALR 66
Query: 72 REGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAV 131
GI+ RF+F G S + + E +DLRA+ + A+ T + G V
Sbjct: 67 ELGITVVRFNFRSVGTSA--GSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYV 124
Query: 132 LLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQE 191
L A+ + +
Sbjct: 125 SLRAAAALEP-------------------------------------------------Q 135
Query: 192 SLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE-FDKFIPNHKLHIIEGADH 250
L+ + + L I G D++V + + + L + H
Sbjct: 136 VLISIAPPAGRWDFSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSH 195
Query: 251 EFTSHQDELASLVIQFIK 268
F +L + ++
Sbjct: 196 FFHRKLIDLRGALQHGVR 213
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 69.7 bits (170), Expect = 1e-13
Identities = 34/268 (12%), Positives = 84/268 (31%), Gaps = 32/268 (11%)
Query: 5 RPTQSYRQGFQQDPVVQRRRVVIPNSHGEKLVGILHET--GSKQLVIVCHGFQSTKDRIP 62
R + + + + + +P L G + ++ +IV G ++++ +
Sbjct: 119 RMEKLFMLAVDNSKI-PLKSIEVPFEGE-LLPGYAIISEDKAQDTLIVVGGGDTSREDLF 176
Query: 63 MVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAII 122
+ + E + + D G G++ L+ A + AI+ + A I AI
Sbjct: 177 YMLGYSGWEHD-YNVLMVDLPGQGKNPNQGLHFEVDARA-AISAILDWYQAPTEKI-AIA 233
Query: 123 GHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLG----------------LGYL 166
G S GG K I I + +++ + +
Sbjct: 234 GFSGGGYFTAQAVEKDKRIKAWIASTPIYDVAEVFRISFSTALKAPKTILKWGSKLVTSV 293
Query: 167 QRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVP 226
++ + + G++++ + ++++ + + I D L + G +
Sbjct: 294 NKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDY---NKI--DVPSLFLVGAGEDSEL 348
Query: 227 AEDALE-FDKFIPNHK---LHIIEGADH 250
+ +D F L
Sbjct: 349 MRQSQVLYDNFKQRGIDVTLRKFSSESG 376
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 4e-13
Identities = 38/261 (14%), Positives = 73/261 (27%), Gaps = 42/261 (16%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFR---FDFSGNGESEGSFLYGN 96
GS +I HG K L G ++ D G G S+ +
Sbjct: 16 FSIGSGTPIIFLHGLSLDKQS--TCLFFEPLSNVGQ--YQRIYLDLPGMGNSDPISPSTS 71
Query: 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND---------------- 140
+ AI + R I + GHS GG A D
Sbjct: 72 DNVLETLIEAIE-EIIGARRFI--LYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADH 128
Query: 141 --------ISIVINISGRFNLKRGIEGRLGLG-YLQRIKQNGFIDVRNKKGKLEYRVTQE 191
I+I+ K L + + + + ++ + E + +
Sbjct: 129 SKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFID 188
Query: 192 SLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH- 250
L + S I + G D++V ++ L+ N ++ ++ H
Sbjct: 189 QLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENGEIVLLNRTGHN 248
Query: 251 ---EFTSHQDELASLVIQFIK 268
+ ++ + F+
Sbjct: 249 LMID---QREAVGFHFDLFLD 266
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 3e-12
Identities = 39/233 (16%), Positives = 77/233 (33%), Gaps = 55/233 (23%)
Query: 41 ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS--FLYGNYR 98
+++ + + HG+ T +L + G + + D+ G G S S +
Sbjct: 23 TDSNRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRGD 82
Query: 99 RE--AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRG 156
+ AE +R ++ A G + I+G S GG V++ +Y D
Sbjct: 83 LKHAAEFIRDYLK---ANGVARSVIMGASMGGGMVIMTTLQYPD---------------- 123
Query: 157 IEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLT 216
V + + + L
Sbjct: 124 ------------------------------IVDGIIAVAPAWVESLKGDMK-KIRQKTLL 152
Query: 217 IHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH-EFTSHQDELASLVIQFIK 268
+ G+KD +VP + E+ I +L I+EG+ H + +E + + F++
Sbjct: 153 VWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITVDFLR 205
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 5e-12
Identities = 43/259 (16%), Positives = 84/259 (32%), Gaps = 42/259 (16%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGESEGSFLYGN 96
+ +++ HG + D N LA L + + + D +G S + N
Sbjct: 11 QNQHNNSPIVLVHGLFGSLD-----NLGVLARDLVNDH-NIIQVDVRNHGLSPREPVM-N 63
Query: 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDIS---IVINISGRFNL 153
Y A+DL + D + IGHS GG AV+ + D + I+I+
Sbjct: 64 YPAMAQDLVDTL-DALQIDKAT--FIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH 120
Query: 154 KRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTD------------I 201
R + + + ++ + + + +E ++ L +
Sbjct: 121 VRRHDEIFA--AINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVL 178
Query: 202 HAACHMICQ-------DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTS 254
I D L I G V + + P + H+I GA H
Sbjct: 179 WDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGH--WV 236
Query: 255 HQD---ELASLVIQFIKAN 270
H + + + +++ +
Sbjct: 237 HAEKPDAVLRAIRRYLNDH 255
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 Length = 249 | Back alignment and structure |
|---|
Score = 63.4 bits (153), Expect = 6e-12
Identities = 46/283 (16%), Positives = 85/283 (30%), Gaps = 72/283 (25%)
Query: 20 VQRRRVVIPNSHGEKLVGILH--ETGSKQLVIVCHG---FQSTKDRIPMVNLAAALEREG 74
V+ G +L G + S + I+ H F T + + L ++ G
Sbjct: 21 GHMPEVIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRG 79
Query: 75 ISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV-----QDFCAKGRVITAIIGHSKGGN 129
+ RF+F G S+G F +G E D + + +K + G+S G
Sbjct: 80 FTTLRFNFRSIGRSQGEFDHGA--GELSDAASALDWVQSLHPDSKSCWV---AGYSFGAW 134
Query: 130 AVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVT 189
+ + +I ++I+
Sbjct: 135 IGMQLLMRRPEIEGFMSIAP---------------------------------------- 154
Query: 190 QESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHK-----LHI 244
+ + + L I+G DK+ P +D + + K
Sbjct: 155 --------QPNTYDFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRT 206
Query: 245 IEGADHEFTSHQDELASLVIQFIKANYQKDG---PTSKRADGT 284
+ GA+H F DEL ++ + P +KR G+
Sbjct: 207 LPGANHFFNGKVDELMGECEDYLDRRLNGELVPEPAAKRIRGS 249
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 7e-12
Identities = 41/266 (15%), Positives = 72/266 (27%), Gaps = 58/266 (21%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99
GS VI HG + L ++ D G+G S GNY
Sbjct: 79 GSAPRVIFLHGGGQNAH-----TWDTVIVGLGEPALA---VDLPGHGHSAWR-EDGNYSP 129
Query: 100 E--AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY---------NDISIV---- 144
+ +E L ++++ A G ++G S GG + A+ D++
Sbjct: 130 QLNSETLAPVLREL-APGAEF--VVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQR 186
Query: 145 -----INISGRFNLKRGIEGRLGL--------GYLQRIKQNGFID------VRNKKGKLE 185
G L G R G
Sbjct: 187 HAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWV 246
Query: 186 YRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHI 244
+R + + + + + G V +D E + + +HI
Sbjct: 247 WRYDAIRTFGDFA-GLWDDVDAL--SAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHI 303
Query: 245 IEGADHEFTSHQD---ELASLVIQFI 267
+E + H + D L +V +
Sbjct: 304 VEKSGH--SVQSDQPRALIEIVRGVL 327
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-11
Identities = 48/276 (17%), Positives = 91/276 (32%), Gaps = 49/276 (17%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPM-VNLAAALEREGISAFR---FDFSGNGESEGSFLYG 95
E G Q VI+ HG + + N+ L R +R D G G++ +
Sbjct: 31 LEAGKGQPVILIHGGGAGAESEGNWRNVIPILARH----YRVIAMDMLGFGKTAKPDIEY 86
Query: 96 NYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDI--SIVINISGRFNL 153
R L ++ G+V I+G+S GG L + ++++ ++V+ S +
Sbjct: 87 TQDRRIRHLHDFIKAMNFDGKVS--IVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVV 144
Query: 154 KRGIEGRLGLGY---LQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST----DIHAACH 206
+ + R + Y + + + ++ + R + A
Sbjct: 145 EIHEDLRPIINYDFTREGMVHLVKALTNDGF-----KIDDAMINSRYTYATDEATRKAYV 199
Query: 207 MICQ------------------DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGA 248
Q L + G DK+VP E A +F I + +II
Sbjct: 200 ATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHC 259
Query: 249 DH----EFTSHQDELASLVIQFIKANYQKDGPTSKR 280
H E H ++ A+ + F+ +
Sbjct: 260 GHWAMIE---HPEDFANATLSFLSLRVDITPAAAHH 292
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 63.7 bits (154), Expect = 1e-11
Identities = 36/249 (14%), Positives = 70/249 (28%), Gaps = 39/249 (15%)
Query: 25 VVIPNSHGEKLVGIL---HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFD 81
V + ++ L G +I G + A+ L G +
Sbjct: 135 VWRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGG----LLEYRASLLAGHGFATLALA 190
Query: 82 FSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVIT---AIIGHSKGGNAVLLYASKY 138
+ + + E V +V ++G S G + L AS
Sbjct: 191 YYNFEDLPNNM----DNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFL 246
Query: 139 NDISIVINISG-----RFNLKRGIEGRLGLGY---LQRIKQNGFIDVRNKKGKLEYRVTQ 190
++S ++I+G + LGY ++ +G +D+ + + L
Sbjct: 247 KNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGGYKN 306
Query: 191 ESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEF------DKFIPNHKLHI 244
S++ I A +L I G D +E + ++
Sbjct: 307 PSMI-----PIEKA------QGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIIC 355
Query: 245 IEGADHEFT 253
G H
Sbjct: 356 YPGTGHYIE 364
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-11
Identities = 52/264 (19%), Positives = 86/264 (32%), Gaps = 42/264 (15%)
Query: 41 ETGSKQLVIVCHGFQSTKDRIPM-VNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99
+ G+ + V++ HG+ + AL G +D G G+S + Y
Sbjct: 23 DHGTGKPVVLIHGWPLSGR---SWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDT 79
Query: 100 EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--IS--IVINISGRFNLKR 155
DL +++ + + +G S GG V Y S Y I + + K
Sbjct: 80 FTSDLHQLLEQLELQNVTL---VGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKS 136
Query: 156 GI--EGRLGLGYLQRIKQN--------------GFIDVRNKKGKLEYRVTQESLMDRLST 199
EG L ++ K GF ++ + +
Sbjct: 137 EDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGA 196
Query: 200 DIHAACHMIC----QDCR---------VLTIHGTKDKMVPAEDALEFD-KFIPNHKLHII 245
I D R L IHG D VP E + + + IPN K+ +I
Sbjct: 197 SPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALI 256
Query: 246 EGADHE-FTSHQDELASLVIQFIK 268
+G H +H E ++ F+K
Sbjct: 257 KGGPHGLNATHAKEFNEALLLFLK 280
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 2e-11
Identities = 36/221 (16%), Positives = 79/221 (35%), Gaps = 41/221 (18%)
Query: 79 RFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYAS 136
D G G S G A L + + + + I +G S GG A
Sbjct: 44 LVDLPGFGRSRG--------FGALSLADMAEAVLQQAPDKAI--WLGWSLGGLVASQIAL 93
Query: 137 KYND-IS--IVINISGRFNLK---RGIEGRLGLGYLQRIKQN--GFID-------VRNKK 181
+ + + + + S F+ + GI+ + G+ Q++ + ++ + +
Sbjct: 94 THPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTET 153
Query: 182 GKLEYRVTQESLMDRLSTDIHA---ACHMICQ----------DCRVLTIHGTKDKMVPAE 228
+ + R +++++ ++ ++ L ++G D +VP +
Sbjct: 154 ARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRK 213
Query: 229 DALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFIK 268
DK P+ + +I A H F SH E L++ +
Sbjct: 214 VVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 3e-11
Identities = 46/286 (16%), Positives = 79/286 (27%), Gaps = 52/286 (18%)
Query: 16 QDPVVQRRRVVIPNSHGEKLVGILH---ETGSKQLVIVCHGF-QSTKDRIPMVNLAAALE 71
Q + + G ++ G +I HG+ ++ D +N AA
Sbjct: 76 QVSFAECYDLYFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSGDWNDKLNYVAA-- 133
Query: 72 REGISAFRFDFSGNGESEGSF--LYGN------------------YRREAEDLRAIV--- 108
G + D G G + GN +R D +
Sbjct: 134 --GFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIV 191
Query: 109 --QDFCAKGRVITAIIGHSKGGNAVLLYASKYNDIS-IVINISGRFNLKRGIEGRLGLGY 165
+ RV ++G S+GG L A+ + +V + KR + L
Sbjct: 192 MNMPEVDEDRV--GVMGPSQGGGLSLACAALEPRVRKVVSEYPFLSDYKRVWDLDLAKNA 249
Query: 166 LQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLS-TDIHAACHMICQDCRVLTIHGTKDKM 224
Q I + + + +L D+ I VL G D++
Sbjct: 250 YQEI-------TDYFRLFDPRHERENEVFTKLGYIDVKNLAKRI--KGDVLMCVGLMDQV 300
Query: 225 VPAEDALEFDKFIP-NHKLHIIEGADHEFT-SHQDELASLVIQFIK 268
P I + + HE D +QF+
Sbjct: 301 CPPSTVFAAYNNIQSKKDIKVYPDYGHEPMRGFGDL----AMQFML 342
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 6e-11
Identities = 54/277 (19%), Positives = 91/277 (32%), Gaps = 44/277 (15%)
Query: 27 IPNSHGEKLVGILHETGS--KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSG 84
+ N+ G+ L K L+ V HG R LA L + F D G
Sbjct: 22 LVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSGR--YEELARMLMGLDLLVFAHDHVG 79
Query: 85 NGESEGSFLY-GNYRREAEDLRAIVQDFCAKGRVI-TAIIGHSKGGNAVLLYASKY-NDI 141
+G+SEG + ++ D+ V + ++GHS GG +L A++
Sbjct: 80 HGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHF 139
Query: 142 SIVINISG----RFNLKRGIEGRLGLGYLQRI---KQNGFIDV----RNKKGKLEYR--- 187
+ ++ + L L + +G ID RNK Y
Sbjct: 140 AGMV-LISPLVLANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDP 198
Query: 188 -VTQESL-------MDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEF------ 233
+ + L + + + A + L + G+ D++ ++ A
Sbjct: 199 LICRAGLKVCFGIQLLNAVSRVERALPKL--TVPFLLLQGSADRLCDSKGAYLLMELAKS 256
Query: 234 -DKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269
DK L I EGA H E+ + V I
Sbjct: 257 QDK-----TLKIYEGAYHVLHKELPEVTNSVFHEINM 288
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 6e-11
Identities = 42/248 (16%), Positives = 70/248 (28%), Gaps = 24/248 (9%)
Query: 16 QDPVVQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGI 75
P V+R V + G + E G ++ G A+ L +G
Sbjct: 147 LPPGVRREPVRVGRVRGTLFLP--PEPGPFPGIVDMFGTGGGLLEY----RASLLAGKGF 200
Query: 76 SAFRFDFSGNGESEGSF--LYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLL 133
+ + + + L+ Y EA + + V ++G SKGG L
Sbjct: 201 AVMALAYYNYEDLPKTMETLHLEYFEEAMNY-LLSHPEVKGPGV--GLLGISKGGELCLS 257
Query: 134 YASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQ-NGFIDVRNKKGKLEYRVTQES 192
AS I+ + I+G G L Y G R K K Y +
Sbjct: 258 MASFLKGITAAVVINGSVANVGGT-----LRYKGETLPPVGVNRNRIKVTKDGYADIVDV 312
Query: 193 LMDRLSTDIHAACHMICQ-DCRVLTIHGTKDKMVPAEDALEF------DKFIPNHKLHII 245
L L + + + + L + G D +E ++
Sbjct: 313 LNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICY 372
Query: 246 EGADHEFT 253
H
Sbjct: 373 PETGHYIE 380
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} Length = 202 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 9e-11
Identities = 31/217 (14%), Positives = 67/217 (30%), Gaps = 35/217 (16%)
Query: 52 HGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDF 111
HGF S+ + L++ L AE L +IV D
Sbjct: 9 HGFNSSPSSAKATTFKSWLQQHH-PHIEMQIPQ--------LPPYPAEAAEMLESIVMDK 59
Query: 112 CAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQ 171
+ I+G S GG + +++ ++V+N + + LG
Sbjct: 60 AGQ---SIGIVGSSLGGYFATWLSQRFSIPAVVVNPA--VRPFELLSDYLG--------- 105
Query: 172 NGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDAL 231
+ +N +Y + + D + + + T D+++ A+
Sbjct: 106 ----ENQNPYTGQKYVLESRHIYDLK----AMQIEKLESPDLLWLLQQTGDEVLDYRQAV 157
Query: 232 EFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIK 268
+ + + G +H F + ++ F+
Sbjct: 158 A---YYTPCRQTVESGGNHAFVGFDHYFSP-IVTFLG 190
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 2e-10
Identities = 44/273 (16%), Positives = 88/273 (32%), Gaps = 59/273 (21%)
Query: 40 HETGSKQLVIV-CHGFQSTKD--RIPMVNLAAALEREGISAFR---FDFSGNGESE--GS 91
++ G +V HG N+ +E +R D G G+S+ +
Sbjct: 30 NDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAG----YRVILLDCPGWGKSDSVVN 85
Query: 92 FLYGNYRREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYND-IS--IVIN 146
A L+++V ++ ++G+S GG++ + + K+ + + +++
Sbjct: 86 SGSR-SDLNARILKSVVD---QLDIAKIH--LLGNSMGGHSSVAFTLKWPERVGKLVLMG 139
Query: 147 ISGRFNLKRGIEGRLGLGYLQRIKQNGFID-VRNKKGKLEY---RVTQESLMDRLS---- 198
G+ L ++ + I+ ++ + +T RL+
Sbjct: 140 GGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLS 199
Query: 199 -------------------TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN 239
D I + L + G D+ VP + L I
Sbjct: 200 RRDHLENFVKSLEANPKQFPDFGPRLAEI--KAQTLIVWGRNDRFVPMDAGLRLLSGIAG 257
Query: 240 HKLHIIEGADH----EFTSHQDELASLVIQFIK 268
+LHI H E H D LV+ F+
Sbjct: 258 SELHIFRDCGHWAQWE---HADAFNQLVLNFLA 287
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-10
Identities = 43/271 (15%), Positives = 75/271 (27%), Gaps = 55/271 (20%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFR---FDFSGNGESEGSFLYGN 96
G + V H + D A + + G G S+ +
Sbjct: 18 FLKGEGPPLCVTHLYSEYNDN--GNTFANPFTDH----YSVYLVNLKGCGNSDSAKNDSE 71
Query: 97 YRRE--AEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYND-IS--IVINISG 149
Y +DL AI + A + GHS GG L+YA++ + ++ IV +
Sbjct: 72 YSMTETIKDLEAIRE---ALYINKWG--FAGHSAGGMLALVYATEAQESLTKIIVGGAAA 126
Query: 150 RFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEY-------------RVTQESLMDR 196
+ ++ + ++ N ++ ++E L +
Sbjct: 127 SKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEA 186
Query: 197 LSTDIHAA-----CHMIC------QDCR---------VLTIHGTKDKMVPAEDALEFDKF 236
L + D R G D P + E
Sbjct: 187 LKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANL 246
Query: 237 IPNHKLHIIEGADHE-FTSHQDELASLVIQF 266
IPN L E ++H F D+ V
Sbjct: 247 IPNATLTKFEESNHNPFVEEIDKFNQFVNDT 277
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 5e-10
Identities = 38/298 (12%), Positives = 85/298 (28%), Gaps = 59/298 (19%)
Query: 21 QRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVN---LAAAL-EREGIS 76
V + N G+ + ++++ HG + + AA+ R
Sbjct: 14 SMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSAL-----SWAVFTAAIISRVQCR 68
Query: 77 AFRFDFSGNGESEGSFLYGNYRRE--AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLY 134
D +GE++ + E A+D+ +V+ +IGHS GG +
Sbjct: 69 IVALDLRSHGETKVK-NPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHT 127
Query: 135 ASKYNDIS----IVINISGRFN----------LKRGIEGRLGL----------------- 163
AS S +I++ L+ + L
Sbjct: 128 ASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLE 187
Query: 164 -------GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQ-DCRVL 215
G +++ + + K +R+ ++ L
Sbjct: 188 SARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKL 247
Query: 216 TIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQD---ELASLVIQFIKAN 270
+ D++ + ++ ++ H H+D ++A V F+ +
Sbjct: 248 LLLAGVDRLDKDLTIGQ---MQGKFQMQVLPQCGH--AVHEDAPDKVAEAVATFLIRH 300
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 6e-10
Identities = 55/275 (20%), Positives = 91/275 (33%), Gaps = 40/275 (14%)
Query: 27 IPNSHGEKLVGILHETGS--KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSG 84
+ N+ G+ L + K L+ V HG R LA L + F D G
Sbjct: 40 LVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSGR--YEELARMLMGLDLLVFAHDHVG 97
Query: 85 NGESEGSFLY-GNYRREAEDLRAIVQDFCAKGRVI-TAIIGHSKGGNAVLLYASKY-NDI 141
+G+SEG + ++ D+ V + ++GHS GG +L A++
Sbjct: 98 HGQSEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHF 157
Query: 142 SIVINISG----RFNLKRGIEGRLGLGYLQRIKQN---GFIDV----RNKKGKLEYR--- 187
+ ++ + L L + N G ID RNK Y
Sbjct: 158 AGMV-LISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDP 216
Query: 188 -VTQESLMDRLSTDIHAACHMICQ-----DCRVLTIHGTKDKMVPAEDALEF-------D 234
+ + L + A + + L + G+ D++ ++ A D
Sbjct: 217 LICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQD 276
Query: 235 KFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269
K L I EGA H E+ + V I
Sbjct: 277 K-----TLKIYEGAYHVLHKELPEVTNSVFHEINM 306
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 8e-10
Identities = 38/232 (16%), Positives = 74/232 (31%), Gaps = 56/232 (24%)
Query: 41 ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESE---GSFLYGNY 97
++ V++ HG + + + + L + G A D G G S+ G
Sbjct: 28 SGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGEL 87
Query: 98 RREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGI 157
L A+V D G + +I S G L + +
Sbjct: 88 AP-GSFLAAVV-DALELGPPV--VISPSLSGMYSLPFLTAPGS----------------- 126
Query: 158 EGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTI 217
++ + + TD A + L +
Sbjct: 127 -----------------------------QLPGFVPVAPICTDKINAANYASVKTPALIV 157
Query: 218 HGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFIK 268
+G +D M + E K +PNH++ I++GA H + +E + ++ F++
Sbjct: 158 YGDQDPMGQ--TSFEHLKQLPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQ 207
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 9e-10
Identities = 50/265 (18%), Positives = 90/265 (33%), Gaps = 42/265 (15%)
Query: 41 ETGSKQLVIVCHGFQSTKDRIPM-VNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99
+ GS Q ++ HG+ D + L +G D G+G S + +
Sbjct: 15 DWGSGQPIVFSHGWPLNAD---SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDT 71
Query: 100 EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--IS--IVINISGRFNLKR 155
A+DL ++ + + + G S GG V Y ++ ++ +I+ LK
Sbjct: 72 YADDLAQLI-EHLDLRDAV--LFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKT 128
Query: 156 -----GIEGRLGLGYLQRIKQN----------GFIDVRNKKGKLEY-RVTQESLMDRLST 199
G+ + G Q + G N+ G + + ++
Sbjct: 129 EANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAA 188
Query: 200 DIHA--ACH--MICQDCR---------VLTIHGTKDKMVPAEDALEFD-KFIPNHKLHII 245
C D L +HG D++VP E + + L I
Sbjct: 189 GHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIY 248
Query: 246 EGADHE-FTSHQDELASLVIQFIKA 269
GA H +H+D+L + ++ FIK
Sbjct: 249 SGAPHGLTDTHKDQLNADLLAFIKG 273
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-09
Identities = 50/271 (18%), Positives = 97/271 (35%), Gaps = 52/271 (19%)
Query: 40 HETGSKQLVIVCHGFQSTKD--RIPMVNLAAALEREGISAFR---FDFSGNGESEGSFLY 94
+ GS Q V++ HG+ L A +R +D G G S
Sbjct: 18 EDQGSGQPVVLIHGYPLDGHSWERQTRELLAQ-------GYRVITYDRRGFGGSSKVNTG 70
Query: 95 GNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--IS--IVINISGR 150
+Y A DL +++ + V+ +G S G + Y ++Y ++ +
Sbjct: 71 YDYDTFAADLHTVLETLDLRDVVL---VGFSMGTGELARYVARYGHERVAKLAFLASLEP 127
Query: 151 FNLKR-----GIEGRLGLGYLQRIKQNG-------FIDVRNKKGKLEYRVTQE------- 191
F ++R G+ + G K + + + N L R++++
Sbjct: 128 FLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWN 187
Query: 192 -----------SLMDRLSTDIHAACHMICQ-DCRVLTIHGTKDKMVPAED-ALEFDKFIP 238
+++ D + + L +HGTKD ++P + A F + +P
Sbjct: 188 VAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVP 247
Query: 239 NHKLHIIEGADHE-FTSHQDELASLVIQFIK 268
+EGA H +H DE+ + + F+
Sbjct: 248 EADYVEVEGAPHGLLWTHADEVNAALKTFLA 278
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-09
Identities = 47/271 (17%), Positives = 89/271 (32%), Gaps = 56/271 (20%)
Query: 40 HETGSKQLVIVCHGFQSTKD--RIPMVNLAAALEREGISAFR---FDFSGNGESEGSFLY 94
+E G+ + VI+ HG N+ ++ +R D G +S+ +
Sbjct: 28 NEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAG----YRVILKDSPGFNKSDAVVMD 83
Query: 95 G-NYRREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYND--ISIV-INIS 148
A ++ ++ A R ++G++ GG L +A +Y D ++ +
Sbjct: 84 EQRGLVNARAVKGLMD---ALDIDRAH--LVGNAMGGATALNFALEYPDRIGKLILMGPG 138
Query: 149 GRFNLKRGIEGRLGLGYLQRIKQNGFID-VRNKKGKLEY---RVTQESLMDRLSTDIHAA 204
G G+ L ++ + ++ Y +T+E L R
Sbjct: 139 GLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQP 198
Query: 205 CHM-----------------------ICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHK 241
H+ I + G D+ VP + L+ I + +
Sbjct: 199 EHLKNFLISAQKAPLSTWDVTARLGEI--KAKTFITWGRDDRFVPLDHGLKLLWNIDDAR 256
Query: 242 LHIIEGADH----EFTSHQDELASLVIQFIK 268
LH+ E H DE LVI F++
Sbjct: 257 LHVFSKCGAWAQWE---HADEFNRLVIDFLR 284
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 44/226 (19%), Positives = 78/226 (34%), Gaps = 40/226 (17%)
Query: 79 RFDFSGNGESEGSFLYGNYRRE------AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVL 132
FD+ G+G S+ + R A+D+ + + + +GHS G +
Sbjct: 51 LFDYVGSGHSDLR--AYDLNRYQTLDGYAQDVLDVC-EALDLKETV--FVGHSVGALIGM 105
Query: 133 LYASKYND-IS--IVINISGRFNLK-----RGIEGRLGLGYLQRIKQN------GFIDVR 178
L + + + S +++ S + G E LG L+ +++N F
Sbjct: 106 LASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATV 165
Query: 179 NKKGKLEYRVTQESLMDRLSTDIHAA---CHMI-CQDCR---------VLTIHGTKDKMV 225
+ + +E STD A D R L + D +
Sbjct: 166 LNQPDRP-EIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIA 224
Query: 226 PAEDALEFDKFIPNHKLHIIEGADH-EFTSHQDELASLVIQFIKAN 270
PA + +P L +E H SH DE L+ ++KA+
Sbjct: 225 PATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGDYLKAH 270
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} Length = 391 | Back alignment and structure |
|---|
Score = 56.5 bits (135), Expect = 3e-09
Identities = 32/283 (11%), Positives = 67/283 (23%), Gaps = 62/283 (21%)
Query: 15 QQDPVVQRRRVVIPNSHGEKLVGIL----HETGSKQLVIVCHGFQSTKDRI--------- 61
++ + ++ H G+ V+ G TK+ +
Sbjct: 80 EKKEGYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDK 139
Query: 62 -------PMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN------------------ 96
P V++A + +EG A D + GE+ Y
Sbjct: 140 LTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGW 199
Query: 97 --YRREAEDLRAIVQDFCAKGRVIT---AIIGHSKGGNAVLLYASKYNDISIVINISGRF 151
+ ++ A+ + I G S G +++ DI +
Sbjct: 200 SWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLDKDIYAFVYNDFLC 259
Query: 152 NLKRGIEGRLGLGYLQ-RIKQNGFID-VRNKKGKLEYRVTQESLMDRLSTDIHAACHMIC 209
+ R N + + D+ A +
Sbjct: 260 QTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNF------------PDVVA---SLA 304
Query: 210 QDCRVLTIHGTKDKMVP-AEDALEFDKFIPNHKLHIIEGADHE 251
++ G D+ + A N + H +
Sbjct: 305 -PRPIIFTEGGLDRDFRLVQSAYAASGKPENAEFHHYPKFADK 346
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 3e-09
Identities = 47/223 (21%), Positives = 75/223 (33%), Gaps = 34/223 (15%)
Query: 79 RFDFSGNGESE----GSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLY 134
FD+ G+G+S+ + Y + A+D+ I+ V IIGHS +
Sbjct: 59 VFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEIL-VALDLVNVS--IIGHSVSSIIAGIA 115
Query: 135 ASKYND-IS--IVINISGRFNLKR-----GIEGRLGLGYLQRIKQN--GFIDVRNKK--G 182
++ D IS +I S F G E + + +N G+ + G
Sbjct: 116 STHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMG 175
Query: 183 KLEYRVTQESLMDRL-STDIHAACHMIC----QDCR---------VLTIHGTKDKMVPAE 228
L +TD A D R L KD + E
Sbjct: 176 ASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPE 235
Query: 229 DALEFDKFIPNHKLHIIEGADH-EFTSHQDELASLVIQFIKAN 270
+ IPN +L +I+ H + + L+I FI+ N
Sbjct: 236 VGQYMAENIPNSQLELIQAEGHCLHMTDAGLITPLLIHFIQNN 278
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 4e-09
Identities = 50/257 (19%), Positives = 78/257 (30%), Gaps = 41/257 (15%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFR---FDFSGNGESEGSFLYGN 96
+GS V++ G ST+ LA L F +D G G+S + Y
Sbjct: 18 ERSGSGPPVVLVGGALSTRAG--GAPLAERLAPH----FTVICYDRRGRGDSGDTPPYA- 70
Query: 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDI--SIVINISGRFN-- 152
RE EDL AI+ A G + G S G LL A+ I V +
Sbjct: 71 VEREIEDLAAIIDA--AGGAA--FVFGMSSGAGLSLLAAASGLPITRLAVFEPPYAVDDS 126
Query: 153 -------LKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAAC 205
+ ++ L G + L ++ Q + + H
Sbjct: 127 RPPVPPDYQTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLP 186
Query: 206 HMICQ--------------DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE 251
+ L + G A E IPN + +E H
Sbjct: 187 YDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIPNARYVTLENQTH- 245
Query: 252 FTSHQDELASLVIQFIK 268
T D +A ++++F
Sbjct: 246 -TVAPDAIAPVLVEFFT 261
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} Length = 398 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 7e-09
Identities = 28/283 (9%), Positives = 62/283 (21%), Gaps = 62/283 (21%)
Query: 20 VQRRRVVIPNSHGEKLVGIL----HETGSKQLVIVCHGFQSTKDRI-------------- 61
+ + ++ + ++ G K+ +
Sbjct: 90 YRLEKWEFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRY 149
Query: 62 --PMVNLAAALEREGISAFRFDFSGNGESEGS------------------FLYGN--YRR 99
P + A +EG A D GE+ G
Sbjct: 150 KDPKLTQALNFVKEGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGY 209
Query: 100 EAEDLRAIVQDFCAKGRVIT---AIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRG 156
+ ++ + + + G S G +++ + I + +
Sbjct: 210 ASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDTSIYAFVYNDFLCQTQER 269
Query: 157 IEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST-DIHAACHMICQDCR-V 214
E R + R + DI A + R +
Sbjct: 270 AEVMTMPDKNGR-----------RPFPNSIRHLIPDFWKNFNFPDIVA---ALA--PRPI 313
Query: 215 LTIHGTKDKMVP-AEDALEFDKFIPNHKLHIIEGADHEFTSHQ 256
+ G D+ + A N K++ + T
Sbjct: 314 ILTEGGLDRDLDLVRKAYAIVGTPDNVKIYHYKKFSDPDTRKN 356
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 55.0 bits (131), Expect = 8e-09
Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 24 RVVIPNSHGEKLVGILHETGS--KQLVIV-CHGFQSTKDRIPMVNLAAALEREGISAFRF 80
V G V IL T S +QLV + +G T ++ L R G + +
Sbjct: 41 HKVNLIGGGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRK-SIVLYLARNGFNVYTI 99
Query: 81 DFSGNGESEGS-------FLYGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNA 130
D+ + + D++ +V R+ + G S GG A
Sbjct: 100 DYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIY--LAGESFGGIA 157
Query: 131 VLLYASKY--NDISIVINISGRFNLKRGIEGRLGLGYLQRIKQN 172
L Y+S Y NDI +I + G K GI + + I++
Sbjct: 158 ALNYSSLYWKNDIKGLILLDGGP-TKHGIRPKFYTPEVNSIEEM 200
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 9e-09
Identities = 47/265 (17%), Positives = 83/265 (31%), Gaps = 49/265 (18%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPM-VNLAAALEREGISAFR---FDFSGNGESE--GSFL 93
H+ G Q VI+ HG AL + +R D G G ++ ++
Sbjct: 20 HDVGEGQPVILIHGSGPGVSAYANWRLTIPALSKF----YRVIAPDMVGFGFTDRPENYN 75
Query: 94 YGNYRREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYNDI--SIVINISG 149
Y + + I+ A + I+G++ GG + A +Y++ +V+ +
Sbjct: 76 YS-KDSWVDHIIGIMD---ALEIEKAH--IVGNAFGGGLAIATALRYSERVDRMVLMGAA 129
Query: 150 RFNLKRGIEGRLGLGY------LQRIKQNGFID--------VRNKKGKLEYRVTQESLMD 195
GY ++ + D R + QES
Sbjct: 130 GTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSS 189
Query: 196 RLSTDIHAACHMICQ--------DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEG 247
+ L IHG +D++VP +L + I +LH+
Sbjct: 190 MFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGR 249
Query: 248 ADH----EFTSHQDELASLVIQFIK 268
H E D LV++F
Sbjct: 250 CGHWTQIE---QTDRFNRLVVEFFN 271
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 9e-09
Identities = 53/271 (19%), Positives = 89/271 (32%), Gaps = 56/271 (20%)
Query: 39 LH--ETGSKQLVIVCHGFQSTKD--RIPMVNLAAALEREGISAFR---FDFSGNGESE-- 89
L+ E GS L++ HG S L L F D G+G S+
Sbjct: 60 LNVREKGSGPLMLFFHGITSNSAVFE----PLMIRLSD----RFTTIAVDQRGHGLSDKP 111
Query: 90 -GSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY---------N 139
+ +Y A+D+ ++ A+G ++GHS G + A+KY
Sbjct: 112 ETGYEANDY---ADDIAGLI-RTLARGHA--ILVGHSLGARNSVTAAAKYPDLVRSVVAI 165
Query: 140 DISIVINISGRFNLKRGIEGRLGL--------GYLQRIKQNGFIDVRNKKGKLEYRVTQE 191
D + I L+ + L YL N D + + Y+
Sbjct: 166 DFTPYIETEALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDG 225
Query: 192 SLMDRLSTDIHAACHMICQ----------DCRVLTIHGTKDKMVPAEDALEFDKFIPNHK 241
L S+ A + VL + G K+V A + + P+
Sbjct: 226 GLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDLP 285
Query: 242 LHIIEGADHEFTSHQ---DELASLVIQFIKA 269
+ ++ GADH ++ + + FI A
Sbjct: 286 VVVVPGADH--YVNEVSPEITLKAITNFIDA 314
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 3e-08
Identities = 56/271 (20%), Positives = 97/271 (35%), Gaps = 56/271 (20%)
Query: 41 ETGSKQLVIVCHGFQSTKDRIPMVNLA-----AALEREGISAFRFDFSGNGESE---GSF 92
+ G+ Q V++ HGF P+ + AAL G +D G G+S +
Sbjct: 19 DHGTGQPVVLIHGF-------PLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGY 71
Query: 93 LYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--IS--IVINIS 148
Y + A DL +++ + + ++G S G V Y S Y I+ +
Sbjct: 72 DYDTF---AADLNTVLETLDLQ-DAV--LVGFSTGTGEVARYVSSYGTARIAKVAFLASL 125
Query: 149 GRFNLKR--GIEGRLGLGYLQRIKQ---------------NGFIDVRNKKGKLEYRVTQE 191
F LK +G + I + + N ++ +
Sbjct: 126 EPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRN 185
Query: 192 SLMDRLSTDIHAACHMICQ------------DCRVLTIHGTKDKMVPAED-ALEFDKFIP 238
S S AA D L +HGT D+ +P E+ A F K +P
Sbjct: 186 SWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP 245
Query: 239 NHKLHIIEGADHE-FTSHQDELASLVIQFIK 268
+ + +EGA H +H +E+ + ++ F+
Sbjct: 246 SAEYVEVEGAPHGLLWTHAEEVNTALLAFLA 276
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 4e-08
Identities = 42/237 (17%), Positives = 84/237 (35%), Gaps = 38/237 (16%)
Query: 68 AALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKG 127
G D G+G S + + A+D+ A+V + +GHS G
Sbjct: 43 LFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHYADDVAAVV-AHLGIQGAV--HVGHSTG 99
Query: 128 GNAVLLYASKYND--IS--IVINISGRFNLKR-----GIEGRLGLGYLQRIKQNG----- 173
G V+ Y +++ + ++ ++I ++ G+ + G+ ++ N
Sbjct: 100 GGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYR 159
Query: 174 --FIDVRNKKGKLEYRVTQE----SLMDRLSTDIHAACHMIC----QDCR---------V 214
+ ++ + A I D V
Sbjct: 160 DVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPV 219
Query: 215 LTIHGTKDKMVPAEDALEF-DKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFIKA 269
L +HG D++VP E++ K +PN L +G H T+H D + + ++ FI++
Sbjct: 220 LVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLAFIRS 276
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-08
Identities = 41/266 (15%), Positives = 87/266 (32%), Gaps = 43/266 (16%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPM-VNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98
+ G + V+ HG+ D + A+ G D G+G S + ++
Sbjct: 14 KDWGQGRPVVFIHGWPLNGD---AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFD 70
Query: 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYN----DISIVINISGRFNLK 154
A+DL ++ V ++ HS GG + Y ++ +++++ +K
Sbjct: 71 TFADDLNDLL-TDLDLRDVT--LVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIK 127
Query: 155 R-----GIEGRLGLGYLQRIKQN----------GFIDVRNKKGKLEYRVTQESLMDRLST 199
G+ + + GF K+ ++
Sbjct: 128 SDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQ 187
Query: 200 DIHAA---CHMICQ----------DCRVLTIHGTKDKMVPAED-ALEFDKFIPNHKLHII 245
I D L +HG D++VP + + + IPN +L +
Sbjct: 188 TIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVY 247
Query: 246 EGADHE---FTSHQDELASLVIQFIK 268
EG+ H +++ +++F+
Sbjct: 248 EGSSHGIAMVPGDKEKFNRDLLEFLN 273
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 7e-08
Identities = 49/267 (18%), Positives = 87/267 (32%), Gaps = 53/267 (19%)
Query: 41 ETGSKQLVIVCHGFQSTKDRIPM-VNLAAALEREGISAFR---FDFSGNGESEGSFLYGN 96
+ Q+++ HGF S N + D G+GE + S +
Sbjct: 12 NVETNQVLVFLHGFLSDSR---TYHNHIEKFTDN----YHVITIDLPGHGEDQSS-MDET 63
Query: 97 YRRE--AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-IS--IVINISGRF 151
+ + L I+ D + + G+S GG L YA + IS I+ + S
Sbjct: 64 WNFDYITTLLDRIL-DKYKDKSIT--LFGYSMGGRVALYYAINGHIPISNLILESTSPGI 120
Query: 152 NLKRGIEGRLGL--GYLQRIKQNG---FID------VRNKKGKLEYRVTQESLMDRLSTD 200
+ R + + + G F++ + + +L + + RLS
Sbjct: 121 KEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQS 180
Query: 201 IHAACHMICQ----------------DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHI 244
H + L + G D+ A + IPN K +
Sbjct: 181 PHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQI-AKKMANLIPNSKCKL 239
Query: 245 IEGADHEFTSHQ---DELASLVIQFIK 268
I H T H DE ++++ F+K
Sbjct: 240 ISATGH--TIHVEDSDEFDTMILGFLK 264
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 8e-08
Identities = 55/265 (20%), Positives = 93/265 (35%), Gaps = 44/265 (16%)
Query: 41 ETGSKQLVIVCHGFQSTKD--RIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98
+ G+ V++ HGF + L A R +D G G+S +Y
Sbjct: 20 DHGTGVPVVLIHGFPLSGHSWERQSAALLDAGYR----VITYDRRGFGQSSQPTTGYDYD 75
Query: 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--IS--IVINISGRFNLK 154
A DL +++ + + ++G S G V Y S Y I+ + F LK
Sbjct: 76 TFAADLNTVLETLDLQ-DAV--LVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLK 132
Query: 155 R--GIEGRLGLGYLQRIKQN----------GFIDV-----RNKKGKLEYRVTQESLMDRL 197
+G + I GF + N ++ + S
Sbjct: 133 TDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAA 192
Query: 198 STDIHAACHMICQ------------DCRVLTIHGTKDKMVPAED-ALEFDKFIPNHKLHI 244
S AA D L +HGT D+ +P E+ A F K +P+ +
Sbjct: 193 SGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVE 252
Query: 245 IEGADHE-FTSHQDELASLVIQFIK 268
+EGA H +H +E+ + ++ F+
Sbjct: 253 VEGAPHGLLWTHAEEVNTALLAFLA 277
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 8e-08
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH----EFTSHQDELASLVIQF 266
VL I G +D++ P + AL K IP +LH+ H E DE L I+F
Sbjct: 230 RQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVE---KFDEFNKLTIEF 286
Query: 267 IKA 269
+
Sbjct: 287 LGG 289
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 9e-08
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFD-KFIPNHKLHIIEGADHE-FTSHQDELASLVIQFIK 268
D VL HGT D++VP DA + + N L EG H ++H + L ++ F+K
Sbjct: 215 DVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274
Query: 269 A 269
+
Sbjct: 275 S 275
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A Length = 259 | Back alignment and structure |
|---|
Score = 50.7 bits (120), Expect = 1e-07
Identities = 40/264 (15%), Positives = 65/264 (24%), Gaps = 72/264 (27%)
Query: 24 RVVIPNSHGEKLVGILHETGSKQ---LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRF 80
R G + G+ LV++ HG + K + +A L GISA
Sbjct: 32 RGFSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAI 91
Query: 81 DFSGNGESEGSFL------------YGNYRREAEDLRAIVQDFCAK----------GRVI 118
D G+GE + E A++ D+ A
Sbjct: 92 DGPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPT- 150
Query: 119 TAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVR 178
G S G L + I + + G+ G + ++
Sbjct: 151 -GWWGLSMGTMMGLPVTASDKRIKVALLGLMGVE---GVNGEDLVRLAPQVT-------- 198
Query: 179 NKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE-FDKFI 237
C V + D++V + LE F K
Sbjct: 199 ---------------------------------CPVRYLLQWDDELVSLQSGLELFGKLG 225
Query: 238 PNHKLHIIEGADHEFTSHQDELAS 261
K + H + A
Sbjct: 226 TKQKTLHVNPGKHSAVPTWEMFAG 249
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 1e-07
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH----EFTSHQDELASLVIQF 266
VL HG +D++VP + +L K + + +L +++ H E D + ++++
Sbjct: 225 PHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLE---RWDAMGPMLMEH 281
Query: 267 IKA 269
+A
Sbjct: 282 FRA 284
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 51.3 bits (122), Expect = 1e-07
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 5/61 (8%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQ---DELASLVIQFI 267
R + I G + P ++ L K + N+ L +I G H + D + + I
Sbjct: 284 RKRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSHLV--NVEAPDLVIERINHHI 341
Query: 268 K 268
Sbjct: 342 H 342
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 43/275 (15%), Positives = 83/275 (30%), Gaps = 66/275 (24%)
Query: 39 LH--ETGSKQLVIVC-HGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGESEGSF 92
LH + ++ ++V HG + + + + L R +A D G+G +
Sbjct: 7 LHFAKPTARTPLVVLVHGLLGSGA-----DWQPVLSHLARTQCAALTLDLPGHGTNPERH 61
Query: 93 LYGNYRREAEDLRA-IVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND----ISIVINI 147
N+ E + + ++ VI ++G+S GG ++ ++ + I
Sbjct: 62 CD-NFAEAVEMIEQTVQAHVTSEVPVI--LVGYSLGGRLIMHGLAQGAFSRLNLRGAIIE 118
Query: 148 SGRFNLKR--GIEGRL--GLGYLQRIKQNGFIDVRNKKGK------LEYRVTQESLMDRL 197
G F L+ R + QR Q V + + L + Q + R
Sbjct: 119 GGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRS 178
Query: 198 STDIHAACHMICQ----------------DCRVLTIHGTKDKMVPAEDALEFDKF----- 236
+ + HM+ + + G +D KF
Sbjct: 179 ANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQD-----------SKFQQLAE 227
Query: 237 IPNHKLHIIEGADHEFTSHQD---ELASLVIQFIK 268
+ A H H + A +V I
Sbjct: 228 SSGLSYSQVAQAGH--NVHHEQPQAFAKIVQAMIH 260
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 3e-07
Identities = 38/280 (13%), Positives = 81/280 (28%), Gaps = 59/280 (21%)
Query: 41 ETGSKQLVIVCHGFQSTKD--RIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYG-NY 97
+ + + +++ HG L G D G +S Y ++
Sbjct: 42 KKANGRTILLMHGKNFCAGTWE----RTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSF 97
Query: 98 RREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-IS--IVINISG----- 149
++ A + A+++ G ++IGHS GG YA Y + +++N G
Sbjct: 98 QQLAANTHALLE---RLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWK 154
Query: 150 -----RFNLKRGIEGRLGLGY--LQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIH 202
++ L +++ +Q + + + Q + +
Sbjct: 155 ALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESV 214
Query: 203 AACHMICQD---------------CRVLTIHGTKDKMVPAEDAL---------------- 231
A + D L + G KD +DA
Sbjct: 215 AWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGK 274
Query: 232 EFDKFIPNHKLHIIEGADHEFTSHQ--DELASLVIQFIKA 269
+ + IP L H Q + +++ ++
Sbjct: 275 DAARRIPQATLVEFPDLGH-TPQIQAPERFHQALLEGLQT 313
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 Length = 262 | Back alignment and structure |
|---|
Score = 49.7 bits (118), Expect = 3e-07
Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 17/110 (15%)
Query: 47 LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRA 106
V++ GF + + + L L +G F D + + S L +
Sbjct: 56 AVVISPGFTAYQSS--IAWLGPRLASQGFVVFTIDTNTTLDQPDSR--------GRQLLS 105
Query: 107 IV----QDFCAKGRVIT---AIIGHSKGGNAVLLYASKYNDISIVINISG 149
+ Q + RV ++GHS GG L A + I ++G
Sbjct: 106 ALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTSLKAAIPLTG 155
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 4e-07
Identities = 44/235 (18%), Positives = 87/235 (37%), Gaps = 36/235 (15%)
Query: 67 AAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSK 126
L G FD G G S+ + +Y A+D+ +++ K V ++G S
Sbjct: 39 MEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHLDLK-EVT--LVGFSM 95
Query: 127 GGNAVLLYASKYND--IS--IVINISGRFNLKR-----GIEGRLGLGYLQRIKQNG---F 174
GG V Y +++ ++ +++ ++ G+ + + + ++
Sbjct: 96 GGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFI 155
Query: 175 IDV------RNKKGKLEYRVTQESLMDRLSTDIHAACHMI----CQDCR---------VL 215
D NK + V ++L L + A + D R L
Sbjct: 156 SDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTL 215
Query: 216 TIHGTKDKMVPAEDALEF-DKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFIK 268
IHG D++VP E + + I +L + + A H +H +L ++ F+K
Sbjct: 216 VIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 Length = 273 | Back alignment and structure |
|---|
Score = 48.5 bits (115), Expect = 8e-07
Identities = 24/206 (11%), Positives = 56/206 (27%), Gaps = 51/206 (24%)
Query: 96 NYR--------REAEDLRAIVQDFCAKG---RVITAIIGHSKGGNAVLLYASKYND---- 140
YR R D + + + + ++GHS G + + D
Sbjct: 84 EYRLSPEITNPRNLYDAVSNITRLVKEKGLTNIN--MVGHSVGATFIWQILAALKDPQEK 141
Query: 141 --------------ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEY 186
+ V + G ++LK + + + + F + G Y
Sbjct: 142 MSEAQLQMLGLLQIVKRVFLLDGIYSLKELLI--------EYPEYDCFTRLAFPDGIQMY 193
Query: 187 RVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKF-----IPNHK 241
+M + + + +H D+++ + K
Sbjct: 194 EEEPSRVMPYVKKALSR------FSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLS-FK 246
Query: 242 LHIIEGADHEFTSHQDELASLVIQFI 267
L++ + H ++A + I
Sbjct: 247 LYLDDLGLHNDVYKNGKVAKYIFDNI 272
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* Length = 317 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 1e-06
Identities = 11/97 (11%), Positives = 28/97 (28%), Gaps = 9/97 (9%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
+ +++ G +T + N + G + + + E
Sbjct: 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFM-------LNDTQVNTE 81
Query: 103 DLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY 138
+ + A G ++ S+GG V + +
Sbjct: 82 YMVNAITALYAGSGNNKLPVLTWSQGG-LVAQWGLTF 117
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* Length = 316 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 1e-06
Identities = 11/97 (11%), Positives = 28/97 (28%), Gaps = 9/97 (9%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
+ +++ G +T + N + G + + + E
Sbjct: 63 SVSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFM-------LNDTQVNTE 115
Query: 103 DLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY 138
+ + A G ++ S+GG V + +
Sbjct: 116 YMVNAITTLYAGSGNNKLPVLTWSQGG-LVAQWGLTF 151
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 1e-06
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT--SHQDELASLVIQFIK 268
L GT ++P +A + +PN K I H + + D + S + +++
Sbjct: 233 PVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLH-YLQEDNPDLIGSEIARWLP 291
Query: 269 ANYQK 273
A +
Sbjct: 292 ALHHH 296
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 38/291 (13%), Positives = 77/291 (26%), Gaps = 36/291 (12%)
Query: 10 YRQGFQQDPVVQRRRVVIPNSHGEKLVGI-LH--ETGSKQLVIVCHGFQSTKDRIPMVNL 66
+ + + + + I L + G+ V+ G +
Sbjct: 5 HHHHHHDYDIPTTENLYFQGAMDPEFRVINLAYDDNGTGDPVVFIAGRGGAGRTWHPHQV 64
Query: 67 AAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSK 126
A L G FD G G +E + + + D A++ + ++G S
Sbjct: 65 PAFLAA-GYRCITFDNRGIGATENAEGFT-TQTMVADTAALI-ETLDIAPAR--VVGVSM 119
Query: 127 GG---------------NAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQ 171
G +AVL+ D + L +
Sbjct: 120 GAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLL 179
Query: 172 NGFID--VRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQ----------DCRVLTIHG 219
F + + ++ + + + Q VL I
Sbjct: 180 ENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGF 239
Query: 220 TKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFIKA 269
D + P E +PN + I A H F + + + +++F +
Sbjct: 240 ADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFERPEAVNTAMLKFFAS 290
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-06
Identities = 47/281 (16%), Positives = 89/281 (31%), Gaps = 49/281 (17%)
Query: 18 PVVQRRRVVIPNSHGEKLVGIL---HETGSKQLVIVCHGFQSTKDRIP--MVNLAAALER 72
V+ R+ + ++ G + G ++ HG+ ++ D MVN A
Sbjct: 52 DGVKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALH--- 108
Query: 73 EGISAFRFDFSGNGESEGSFLYGN------------------YRREAEDLRAIVQDFCAK 114
G + F G SE + + + YR D ++ +
Sbjct: 109 -GYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSF 167
Query: 115 GRVIT---AIIGHSKGGNAVLLYASKYNDIS-IVINISGRFNLKRGIEGRLGLGYLQRIK 170
V + G S+GG + A+ + V + N +R +
Sbjct: 168 DEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFER---------AIDVAL 218
Query: 171 QNGFIDVRNKKGKLEYRVTQESLMDRLST-DIHAACHMICQDCRVLTIHGTKDKMVPAED 229
+ ++++ + + T+ M LS DI + VL G DK+ P
Sbjct: 219 EQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRV--KVPVLMSIGLIDKVTPPST 276
Query: 230 ALEFDKFIP-NHKLHIIEGADHEFT-SHQDELASLVIQFIK 268
+ +L + HE+ + Q E + F K
Sbjct: 277 VFAAYNHLETKKELKVYRYFGHEYIPAFQTE----KLAFFK 313
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 3e-06
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQ-DELASLVIQFIKA 269
L I D + PA IP +L I G H S LA +++ ++
Sbjct: 237 TVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILAHTRS 296
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 5e-06
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
Query: 48 VIVCHGFQSTKDRIPMVN----LAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAED 103
+I+ HG T ++ + L++ G + + + SG +G R E
Sbjct: 11 IILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDG-----PNGR-GEQ 64
Query: 104 LRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND 140
L A V+ A G ++GHS+GG A+ D
Sbjct: 65 LLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPD 102
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 6e-06
Identities = 9/71 (12%), Positives = 21/71 (29%), Gaps = 5/71 (7%)
Query: 214 VLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQD---ELASLVIQFIKAN 270
L H + P + +PN ++ + H F +D + + +++ N
Sbjct: 239 KLLFHAEPGALAPKPVVDYLSENVPNLEVRFVGAGTH-FL-QEDHPHLIGQGIADWLRRN 296
Query: 271 YQKDGPTSKRA 281
Sbjct: 297 KPHASLEHHHH 307
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 7e-06
Identities = 41/272 (15%), Positives = 76/272 (27%), Gaps = 61/272 (22%)
Query: 44 SKQLVIVCHGFQSTK---DRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRRE 100
+V+ HG +A L +G D G+G S + +Y
Sbjct: 25 EHPVVLCIHGILEQGLAWQE-----VALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSL 79
Query: 101 --AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-IS--IVINISGRFNLKR 155
+ ++Q+ + ++ ++GHS G AS I I++ + +
Sbjct: 80 TFLAQIDRVIQELPDQ-PLL--LVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESK 136
Query: 156 GIEGRLGLG-----YLQRIKQNGFID-------VRNKKGKLE------------------ 185
L + F D +R L
Sbjct: 137 KESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGG 196
Query: 186 ------YRVTQESL--MDRLSTDIHAACHMICQ-DCRVLTIHGTKDKMVPAEDALEFDKF 236
+ S+ ++ L M+ ++G K+ ED +
Sbjct: 197 VRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMT 256
Query: 237 IPNHKLHIIEGADHEFTSHQD---ELASLVIQ 265
+ K + G H H D LASL++
Sbjct: 257 MTQAKRVFLSG-GH-NL-HIDAAAALASLILT 285
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 8e-06
Identities = 12/61 (19%), Positives = 18/61 (29%), Gaps = 3/61 (4%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT--SHQDELASLVIQFIK 268
L G +V E A F + L + H + H D + V +I
Sbjct: 241 SYPKLLFTGEPGALVSPEFAERFAASLTRCALIRLGAGLH-YLQEDHADAIGRSVAGWIA 299
Query: 269 A 269
Sbjct: 300 G 300
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-05
Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 12/94 (12%)
Query: 48 VIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI 107
V++ HG + + L +G S + + G+ L
Sbjct: 6 VVMVHGIGGA--SFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTN-----YNNGPVLSRF 58
Query: 108 VQDFCAK---GRVITAIIGHSKGGNAVLLYASKY 138
VQ + +V I+ HS GG L Y
Sbjct: 59 VQKVLDETGAKKVD--IVAHSMGGANTLYYIKNL 90
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-05
Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Query: 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDE 258
DI I L G D++ P A + I +LH+ H ++
Sbjct: 224 DITDKISAI--KIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLTMWEDREG 280
Query: 259 LASLVIQFIKAN 270
L+ FI +
Sbjct: 281 YNKLLSDFILKH 292
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} Length = 306 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 2e-05
Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 19/112 (16%)
Query: 47 LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRA 106
+ + G+ T+ + L + G D + + S A L A
Sbjct: 98 AIAISPGYTGTQSS--IAWLGERIASHGFVVIAIDTNTTLDQPDS--------RARQLNA 147
Query: 107 I------VQDFCAKGRVIT---AIIGHSKGGNAVLLYASKYNDISIVINISG 149
+ R+ A++GHS GG L AS+ D+ I ++
Sbjct: 148 ALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPDLKAAIPLTP 199
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 2e-05
Identities = 43/297 (14%), Positives = 89/297 (29%), Gaps = 61/297 (20%)
Query: 16 QDPVVQRRRVVIPNSHGEKLVGILH--ETGSKQL--VIVCHGFQSTKD-RIPMVNLAAAL 70
V+ V G+++ G L + ++L V+ G+ + + +
Sbjct: 62 HLKTVEAYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWLFWPSM- 120
Query: 71 EREGISAFRFDFSGNGESEGSFLYGN-------------------------YRREAEDLR 105
G F D G G + YRR D
Sbjct: 121 ---GYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAV 177
Query: 106 AIV-----QDFCAKGRVITAIIGHSKGGNAVLLYASKYNDIS-IVINISGRFNLKRGIEG 159
V + R+ I G S+GG L ++ ++ ++ + +R
Sbjct: 178 RAVEAAASFPQVDQERI--VIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRR---- 231
Query: 160 RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTD--IHAACHMICQDCRVLTI 217
+Q + + + ++ N +R +E + LS ++ A L
Sbjct: 232 -----AVQLVDTHPYAEITNFLK--THRDKEEIVFRTLSYFDGVNFAARA---KIPALFS 281
Query: 218 HGTKDKMVPAEDALEFDKFIP-NHKLHIIEGADHEFTSHQDELASLVIQFIKANYQK 273
G D + P + ++ I +HE + ++F+K ++K
Sbjct: 282 VGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGSFQAVE--QVKFLKKLFEK 336
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} Length = 249 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 3e-05
Identities = 37/261 (14%), Positives = 76/261 (29%), Gaps = 63/261 (24%)
Query: 48 VIVCHGFQSTKDRIPMVNLAAALEREGIS----AFRFDFSGNGESEGSFLY--------- 94
+ HG+ ++ + + ++ R G +
Sbjct: 9 TLFLHGYGGSERS--ETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKV 66
Query: 95 -------GNYRREAEDLRAIVQDFCAKGRVITA-IIGHSKGGNAVLLYASKYND------ 140
GN++ A ++ ++ ++ + +GHS G + Y Y D
Sbjct: 67 EFKDNKNGNFKENAYWIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQ 126
Query: 141 ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKL--EYRVTQESLMDRLS 198
+ +NI+G +N G+ + +D + K ++ YR
Sbjct: 127 LKKEVNIAGVYN---------GILNMNENVNEIIVDKQGKPSRMNAAYRQLLSLYKIYCG 177
Query: 199 TDIHAACHMICQDCRVLTIHGTK------DKMVPAEDALEFDKFIPNHKLHIIE------ 246
+I VL I+G D V + + E
Sbjct: 178 KEI-----------EVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGA 226
Query: 247 GADHEFTSHQDELASLVIQFI 267
A H ++A+ +IQF+
Sbjct: 227 KAQHSQLHENKDVANEIIQFL 247
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 3e-05
Identities = 37/259 (14%), Positives = 80/259 (30%), Gaps = 37/259 (14%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY-GNYRREA 101
V++ H L LE G D + +G G++ +
Sbjct: 2 AFAHFVLI-HTICH--GAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYS 58
Query: 102 EDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNLKRG 156
E L ++ +VI ++G S GG + + A KY + + + +
Sbjct: 59 EPLLTFLEALPPGEKVI--LVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSY 116
Query: 157 IEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL-----STDIHAACHMICQD 211
+ +L + F ++ K ++ L + L + A + +
Sbjct: 117 VVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKG 176
Query: 212 C---------RVLT-----------IHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE 251
T + +D++ E L + K++ +EG DH+
Sbjct: 177 SLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHK 236
Query: 252 -FTSHQDELASLVIQFIKA 269
+ E+A ++ +
Sbjct: 237 LQLTKTKEIAEILQEVADT 255
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} Length = 254 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 3e-05
Identities = 40/263 (15%), Positives = 73/263 (27%), Gaps = 52/263 (19%)
Query: 48 VIVCHGFQSTKDRIPMVNLAAALEREGISAFRF-----DFSGNGESEGSFLYG------- 95
+I+ HG + +A L E S+ + G + EG
Sbjct: 6 IILIHGSGGNASS--LDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIK 63
Query: 96 --------NYRREAEDLRAIVQDFCAKGRVITA-IIGHSKGGNAVLLYASKYNDISIVIN 146
++ L+ ++D ++ +GHS GG A+ YA Y V
Sbjct: 64 FGFEQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPT 123
Query: 147 ISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACH 206
+ + + F D+ ++ +
Sbjct: 124 LRKLVAI-----------------GSPFNDLDPNDNGMDLSFKKLPNSTPQMDYFIKNQT 166
Query: 207 MICQDCRVLTIHGTK------DKMVPAEDALEFDKFIPNH----KLHIIEGADHEFTS-H 255
+ D VL I G D +VP +L F+P I G D + H
Sbjct: 167 EVSPDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLH 226
Query: 256 QD-ELASLVIQFIKANYQKDGPT 277
+ + F++ +
Sbjct: 227 ETPKSIEKTYWFLEKFKTDETVI 249
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 3e-05
Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 214 VLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQ--DELASLVIQFIKANY 271
L + KD ++ + + + +IP+ K IE H +T E+ ++I+++ ++
Sbjct: 488 ALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGH-WTQMDKPTEVNQILIKWLDSDA 546
Query: 272 QKDGPTSK 279
+ SK
Sbjct: 547 RNPPVVSK 554
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} Length = 275 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 3e-05
Identities = 24/176 (13%), Positives = 47/176 (26%), Gaps = 29/176 (16%)
Query: 120 AIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRN 179
G S G LL A + ++ + G + Y + + +
Sbjct: 99 FTFGRSSGAYLSLLIARDRDIDGVI-DFYGYSRINTEPFKTTNSYYAKIAQSINETMIAQ 157
Query: 180 KKGKLEYRVTQESLMDRLSTDIHAACHMICQDCR----------------------VLTI 217
V Q+ + R ++A + V
Sbjct: 158 LTS--PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLPPVFIA 215
Query: 218 HGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF----TSHQDELASLVIQFIKA 269
H D VP E++ +P+ + +H+F + V+ F+ A
Sbjct: 216 HCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNA 271
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} Length = 258 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 4e-05
Identities = 32/272 (11%), Positives = 57/272 (20%), Gaps = 62/272 (22%)
Query: 2 SVTRPTQSYRQGFQQDPVVQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRI 61
+V +S R+ P G+ +++ +G +
Sbjct: 13 AVANFDRSGPYTVSSQSEGPSCRIYRPRDLGQ-------GGVRHPVILWGNGTGAGPST- 64
Query: 62 PMVNLAAALEREGISAFRFDFSGNGES-EGSFLYGNYRREAEDLRAIVQDFCAKGRVITA 120
L + G + S G E RE + GRV
Sbjct: 65 -YAGLLSHWASHGFVVAAAETSNAGTGREMLACLDYLVRENDTPYGTYSGKLNTGRV--G 121
Query: 121 IIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNK 180
GHS+GG ++ + I LGLG+
Sbjct: 122 TSGHSQGGGGSIMAGQ-DTRVRTTAPIQP---------YTLGLGH--------------- 156
Query: 181 KGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE--FDKFIP 238
S Q + + G D + + + +
Sbjct: 157 --------DSASQRR--------------QQGPMFLMSGGGDTIAFPYLNAQPVYRRANV 194
Query: 239 NHKLHIIEGADH-EFTSHQDELASLVIQFIKA 269
H E + +
Sbjct: 195 PVFWGERRYVSHFEPVGSGGAYRGPSTAWFRF 226
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 5e-05
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
Query: 211 DCRVLTIHGTKDKMVPAEDALE-FDKFIPNHKLHIIEGADH----EFTSHQDELASLVIQ 265
+L + G + + AL F+P+ + +I+ A H E + V++
Sbjct: 246 RVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSME---QPTYVNERVMR 302
Query: 266 FIKA 269
F A
Sbjct: 303 FFNA 306
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 6e-05
Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDE 258
+ + VL I G D+ P F IP+ + H+ G H +E
Sbjct: 254 SVIDRLPDV--TAPVLVIAGEHDEATPKT-WQPFVDHIPDVRSHVFPGTSHCTHLEKPEE 310
Query: 259 LASLVIQFIKAN 270
++V QF+ +
Sbjct: 311 FRAVVAQFLHQH 322
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} Length = 194 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 9e-05
Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 35/157 (22%)
Query: 119 TAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVR 178
T IIGHS G A + YA + +IV+ + G E GY R + ++
Sbjct: 69 TIIIGHSSGAIAAMRYAETHRVYAIVL--VSAYTSDLGDENERASGYFTR--PWQWEKIK 124
Query: 179 NKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP 238
++ T D +P ++ E +
Sbjct: 125 ANC------------------------------PYIVQFGSTDDPFLPWKEQQEVADRL- 153
Query: 239 NHKLHIIEGADHEFTSHQDELASLVIQFIKANYQKDG 275
KLH H + EL ++V +K +
Sbjct: 154 ETKLHKFTDCGHFQNTEFHELITVVKSLLKVPALEHH 190
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 1e-04
Identities = 38/258 (14%), Positives = 72/258 (27%), Gaps = 36/258 (13%)
Query: 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYG-NYRREAED 103
+ G N+ L + I D +G S S R
Sbjct: 41 NPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSGYSPVSNQANVGLRDWVNA 99
Query: 104 LRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY-NDIS--IVINISGRFNLKRGIEGR 160
+ I + F + + HS GG A L ++ I + + + G
Sbjct: 100 ILMIFEHF-KFQSYL--LCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSD 156
Query: 161 L----------------GLGYLQRIKQNGFIDVRNKK--GKLEYRVTQESLMDRLSTDIH 202
L L YL+ + ++ F + K+ +Y Q + + L
Sbjct: 157 LYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKI 216
Query: 203 AACHM-------ICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSH 255
I + + + + E E+ KL + + S
Sbjct: 217 RLALGEEDFKTGISEKIPSIVFSESFREKEYLES--EYLNKHTQTKLILCGQHHYLHWSE 274
Query: 256 QDELASLVIQFIKANYQK 273
+ + V Q + N++K
Sbjct: 275 TNSILEKVEQLLS-NHEK 291
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 39/262 (14%), Positives = 85/262 (32%), Gaps = 50/262 (19%)
Query: 48 VIVC-HGF-QSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR--REAED 103
++C G ++ +D +LA L + G G+S+ + Y+ + +D
Sbjct: 31 PVLCLPGLTRNARD---FEDLATRL-AGDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQD 86
Query: 104 LRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY---------NDISIVINISGRFNLK 154
L A++ R IG S GG +L A+ ND+ ++ G ++
Sbjct: 87 LEALL-AQEGIERF--VAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIR 143
Query: 155 RGIEGRLGLG-------YLQRIKQNGF--------------IDVRNKKGKLEYR------ 187
+ LQ + + I V G++ +
Sbjct: 144 GYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIA 203
Query: 188 -VTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIE 246
+ + D+ + +L + G ++ A+ A + P +L +
Sbjct: 204 EPFEAPVGATPQVDMWPLFDAL-ATRPLLVLRGETSDILSAQTAAKMASR-PGVELVTLP 261
Query: 247 GADHEFTSHQDELASLVIQFIK 268
H T + E + + + ++
Sbjct: 262 RIGHAPTLDEPESIAAIGRLLE 283
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} Length = 283 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 4e-04
Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 45/224 (20%)
Query: 48 VIVCHG----FQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAED 103
+I+ G + A A G AF +++ + + L D
Sbjct: 53 IIIVPGGSYTHIPVAQAESL---AMAFAGHGYQAFYLEYTLLTDQQPLGLA-----PVLD 104
Query: 104 L-RAI--VQDFCAKGRVIT---AIIGHSKGGNAVLLYASKYNDISI----VINISGRFNL 153
L RA+ ++ A+ + G S GG+ V LY + V + N
Sbjct: 105 LGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNN 164
Query: 154 KRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCR 213
+ LGY GF + + +++D +
Sbjct: 165 -------VVLGYPVISPLLGFPKDDATLATWTPTPNELAADQHVNSD----------NQP 207
Query: 214 VLTIHGTKDKMVPAEDALEF-----DKFIPNHKLHIIEGADHEF 252
D +VPA + L + IP ++LH+ + H
Sbjct: 208 TFIWTTADDPIVPATNTLAYATALATAKIP-YELHVFKHGPHGL 250
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 4e-04
Identities = 40/233 (17%), Positives = 75/233 (32%), Gaps = 35/233 (15%)
Query: 66 LAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAIVQDFCAKGRVITAIIGH 124
+ A + G + D +G + L N+ L + A ++I ++GH
Sbjct: 31 IVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLPANEKII--LVGH 88
Query: 125 SKGGNAVLLYASKY-NDISIVINISG---------RFNLKRGIEGRLGLGYLQRIKQNGF 174
+ GG A+ + IS+ + +SG + LG +NG
Sbjct: 89 ALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGP 148
Query: 175 ID----VRNKKGKLEYRVTQES------LMDRLSTDIHAACHMICQDCRVLT-------- 216
+ + L V S L L ++ VL+
Sbjct: 149 TNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVK 208
Query: 217 ---IHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQ 265
I T++ + E + P ++ IEG+DH S +L + ++
Sbjct: 209 RVFIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMSKPQQLFTTLLS 261
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* Length = 277 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 5e-04
Identities = 28/226 (12%), Positives = 64/226 (28%), Gaps = 46/226 (20%)
Query: 47 LVIVCHG----FQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
++I+C G + S ++ P+ A + G+ ++ + + + +
Sbjct: 37 IMIICPGGGFTYHSGREEAPI---ATRMMAAGMHTVVLNYQLIVGDQSVYPW-----ALQ 88
Query: 103 DL-RAI--VQDFCAKGRVIT---AIIGHSKGGNAVLLYASKYNDISIVIN-----ISGRF 151
L I + + V + G S GG+ V Y + G+
Sbjct: 89 QLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQH 148
Query: 152 NLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQD 211
+ LGY GF + ++ + ++
Sbjct: 149 AA-------IILGYPVIDLTAGFPTTSAARNQITTDARLWAAQRLVTPA----------S 191
Query: 212 CRVLTIHGTKDKMVPAEDALEFDKF-----IPNHKLHIIEGADHEF 252
D+ VP ++L++ + + H+ H
Sbjct: 192 KPAFVWQTATDESVPPINSLKYVQAMLQHQVA-TAYHLFGSGIHGL 236
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 5e-04
Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Query: 214 VLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHEFT--SHQDELASLVIQFIK 268
G +D ++ E + I + I+E H F + + + F +
Sbjct: 241 TFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGH-FVQEHGEPIARAALAAFGQ 297
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} Length = 335 | Back alignment and structure |
|---|
Score = 40.1 bits (93), Expect = 6e-04
Identities = 26/272 (9%), Positives = 71/272 (26%), Gaps = 41/272 (15%)
Query: 33 EKLVGILHETGSKQLVIVCHGFQSTKDRIP-MVNLAAALEREGISAFRFDFSGNGESEGS 91
K+ + +++ V+ G + NLA L+ + + + +
Sbjct: 26 CKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEELQG-DWAFVQVEVPS---GKIG 81
Query: 92 FLYGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND---------I 141
++ +AED+ ++ A+ S G V
Sbjct: 82 SGPQDHAHDAEDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILH 141
Query: 142 SIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQE---SLM---- 194
+V + G R + + + D + +T
Sbjct: 142 GVVCDPENPLFTPEGCAARKEH-VEKLMAEGRGEDSLAMLKHYDIPITPARLAGGGFPTL 200
Query: 195 --DRLSTDIHAACHMICQ-----DCRVLTIHGTKDKMVPA-----------EDALEFDKF 236
+ I ++ + +L + + P+ D ++
Sbjct: 201 QEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHTGCNRV 260
Query: 237 IPNHKLHIIEGADHEFTSHQDELASLVIQFIK 268
++ + + + E + ++QF+
Sbjct: 261 TVSYFNDTCDELRRVLKAAESEHVAAILQFLA 292
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 Length = 192 | Back alignment and structure |
|---|
Score = 39.0 bits (90), Expect = 6e-04
Identities = 33/227 (14%), Positives = 67/227 (29%), Gaps = 44/227 (19%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
G+KQ V + HG++++ L L +G+ A + + E
Sbjct: 3 GTKQ-VYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP-----------RLE 50
Query: 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLG 162
D + + T ++ HS G A+L + + + G L G L
Sbjct: 51 DWLDTLSLYQHTLHENTYLVAHSLGCPAILRFLEHLQLRAAL----GGIILVSGFAKSLP 106
Query: 163 LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKD 222
+ G D + ++R I D
Sbjct: 107 TLQMLDEFTQGSFDHQKIIESAKHRA---------------------------VIASKDD 139
Query: 223 KMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269
++VP + + + I + L+ ++ H +V + +
Sbjct: 140 QIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTS 185
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} Length = 250 | Back alignment and structure |
|---|
Score = 39.3 bits (91), Expect = 6e-04
Identities = 37/270 (13%), Positives = 74/270 (27%), Gaps = 71/270 (26%)
Query: 48 VIVCHGFQSTKDRI-PMVNLAAALEREGISAFRFDFSGNGE--SEGSFL----------- 93
VI+ G ++++R ++ + S + +G GS
Sbjct: 7 VIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIG 66
Query: 94 -------YGNYRREAEDLRAIVQDFCAKGRV-ITAIIGHSKGGNAVLLYASKYND----- 140
N ++A L + +GHS GG L+ +Y
Sbjct: 67 FANNRDGKANIDKQAVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKV 126
Query: 141 -ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST 199
I ++ I+ +N++ + +
Sbjct: 127 HIDRLMTIASPYNMEST---------------------------------STTAKTSMFK 153
Query: 200 DIHAACHMICQDCRVLTIHGTK----DKMVPAEDALEFDKFIPNHKLHIIE------GAD 249
+++ + + V +I GT+ D VP + H E
Sbjct: 154 ELYRYRTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTA 213
Query: 250 HEFTSHQDELASLVIQFIKANYQKDGPTSK 279
H ++ SL+ Q++ A D K
Sbjct: 214 HSDLPQNKQIVSLIRQYLLAETMPDKVRQK 243
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} Length = 241 | Back alignment and structure |
|---|
Score = 39.2 bits (92), Expect = 6e-04
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 212 CRVLTIHGTKDKMVPAEDALEFDKFI----PNHKLHIIEGADHEFT 253
VL ++G KD +P + + + ++ + ADH F
Sbjct: 170 APVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFN 215
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 39.4 bits (91), Expect = 9e-04
Identities = 24/221 (10%), Positives = 57/221 (25%), Gaps = 38/221 (17%)
Query: 79 RFDFSGNGESE----GSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLY 134
D G E + Y + + A+ + I+Q + +G G + Y
Sbjct: 72 HVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIG---VGVGAGAYILSRY 128
Query: 135 ASKYNDIS---IVINISGR--------FNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGK 183
A + D ++INI + G+ + L + + ++
Sbjct: 129 ALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPDMILGHLFSQEELSGNSE--- 185
Query: 184 LEYRVTQESLMDRLSTDIHAACHMICQ---------------DCRVLTIHGTKDKMVPAE 228
+ + + + + C V+ + G + A
Sbjct: 186 -LIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHEDAV 244
Query: 229 DALEFDKFIPNHKLHIIEGADHEFTSHQ-DELASLVIQFIK 268
+ + + Q +L F++
Sbjct: 245 VECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 289 | |||
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 100.0 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 100.0 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.98 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.98 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.98 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.98 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.98 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.98 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.97 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.97 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.97 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.97 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.97 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.97 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.97 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.97 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.97 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.97 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.97 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.97 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.97 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.97 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.97 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.97 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.97 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.97 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.97 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.97 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.97 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.97 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.97 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.97 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.94 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.97 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.97 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.96 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.96 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.96 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.96 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.96 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.96 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.96 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.96 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.96 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.96 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.96 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.96 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.96 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.96 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.96 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.96 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.96 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.96 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.95 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.95 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.95 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.95 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.95 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.95 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.95 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.95 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.95 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.95 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.94 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.94 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.94 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.94 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.94 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.94 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.94 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.94 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.94 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.94 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.94 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.94 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.94 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.94 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.94 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.94 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.94 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.94 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.94 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.94 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.93 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.93 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.93 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.93 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.93 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.93 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.93 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.93 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.93 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.93 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.93 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.93 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.93 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.92 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.92 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.92 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.92 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.92 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.92 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.92 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.92 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.92 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.91 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.91 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.91 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.91 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.91 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.9 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.9 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.9 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.9 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.9 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.9 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.89 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.89 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.89 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.88 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.88 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.88 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.87 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.87 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.87 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.87 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.86 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.86 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.86 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.85 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.85 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.85 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.84 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.84 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.82 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.82 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.82 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.82 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.81 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.81 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.81 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.78 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.76 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.74 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.74 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.74 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.73 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.72 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.71 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.7 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.7 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.68 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.68 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.67 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.67 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.61 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.57 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.52 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.49 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.36 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.36 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.33 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.28 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.25 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 99.23 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.22 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.14 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.97 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.96 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.96 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.9 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.89 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.88 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.88 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.86 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.8 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.78 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.76 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.76 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.74 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.74 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.71 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.68 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.65 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 98.4 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 98.38 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 98.17 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 98.16 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 98.14 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.05 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.73 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.49 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 97.44 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.44 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 97.38 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 97.14 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 97.03 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.96 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.9 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 96.87 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 96.8 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.78 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 96.71 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.66 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 96.56 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.52 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.56 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 94.97 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 91.84 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 91.77 | |
| 2h1y_A | 321 | Malonyl coenzyme A-acyl carrier protein transacyl; | 89.56 | |
| 3g87_A | 394 | Malonyl COA-acyl carrier protein transacylase; ssg | 87.6 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 85.81 | |
| 4amm_A | 401 | DYNE8; transferase; 1.40A {Micromonospora chersina | 82.21 |
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=236.77 Aligned_cols=225 Identities=19% Similarity=0.255 Sum_probs=157.1
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
+|+++.||++||++++... |..+++.|+++||+|+++|+||||.|.......++.++++|+.++++++... .++++|
T Consensus 48 ~G~~~~VlllHG~~~s~~~--~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~v~l 124 (281)
T 4fbl_A 48 VGSRIGVLVSHGFTGSPQS--MRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEER-CDVLFM 124 (281)
T ss_dssp CCSSEEEEEECCTTCCGGG--GHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHH-CSEEEE
T ss_pred CCCCceEEEECCCCCCHHH--HHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhC-CCeEEE
Confidence 4566789999999999854 8999999999999999999999999976655667888899999999998654 568999
Q ss_pred EEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc--chhHhhhhhcCcccccc-cccccccccC-hhhhhhh
Q 022960 122 IGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG--LGYLQRIKQNGFIDVRN-KKGKLEYRVT-QESLMDR 196 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~ 196 (289)
+||||||.+++.+|.++|+ |+++|++++............. ......+ ......... ......+... ...+...
T Consensus 125 vG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (281)
T 4fbl_A 125 TGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAEL-PGIGSDIKAEGVKELAYPVTPVPAIKHL 203 (281)
T ss_dssp EEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEE-ECCCCCCSSTTCCCCCCSEEEGGGHHHH
T ss_pred EEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhh-hcchhhhhhHHHHHhhhccCchHHHHHH
Confidence 9999999999999999999 9999999987654322111100 0000000 000000000 0000000000 1111111
Q ss_pred hccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC--cEEEEEcCCCcccc-c-CchHHHHHHHHHHHhh
Q 022960 197 LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN--HKLHIIEGADHEFT-S-HQDELASLVIQFIKAN 270 (289)
Q Consensus 197 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~-~-~~~~~~~~i~~fl~~~ 270 (289)
............++++|+|+++|++|.++|++.++.+++.+++ +++++++++||.++ + +++++.+.|.+||+++
T Consensus 204 ~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 204 ITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp HHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred HHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 1100011111224689999999999999999999999999864 58999999999965 3 3678999999999864
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-36 Score=228.85 Aligned_cols=238 Identities=23% Similarity=0.282 Sum_probs=169.9
Q ss_pred EEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHH
Q 022960 25 VVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRRE 100 (289)
Q Consensus 25 ~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~ 100 (289)
+++. .+|.+++++++.+. ++|+||++||++++.....|..+++.|+++||+|+++|+||||.|.+.....++..+
T Consensus 4 ~~~~-~~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 82 (251)
T 2wtm_A 4 MYID-CDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKW 82 (251)
T ss_dssp EEEE-ETTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHH
T ss_pred eEEe-cCCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccccCCHHHH
Confidence 4454 47889998877553 568899999999983224589999999999999999999999999876655677888
Q ss_pred HHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcc--c
Q 022960 101 AEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFI--D 176 (289)
Q Consensus 101 ~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 176 (289)
++|+.++++++.+. +.++++|+||||||.+++.+|..+|+ |+++|+++|............ +....+. .
T Consensus 83 ~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-------~~~~~~~~~~ 155 (251)
T 2wtm_A 83 LTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGE-------LLGLKFDPEN 155 (251)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTE-------ETTEECBTTB
T ss_pred HHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhh-------hccccCCchh
Confidence 99999999999655 35689999999999999999999998 999999998654321111000 0000000 0
Q ss_pred ccccc-cccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccC
Q 022960 177 VRNKK-GKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSH 255 (289)
Q Consensus 177 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 255 (289)
..... ...........+......+...... ++++|+|+++|++|.++|++.++.+.+.++++++++++++||.+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 233 (251)
T 2wtm_A 156 IPDELDAWDGRKLKGNYVRVAQTIRVEDFVD--KYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCYDHH 233 (251)
T ss_dssp CCSEEEETTTEEEETHHHHHHTTCCHHHHHH--HCCSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEETTCCTTCTTT
T ss_pred cchHHhhhhccccchHHHHHHHccCHHHHHH--hcCCCEEEEEeCCCCCcChHHHHHHHHhCCCcEEEEECCCCcccchh
Confidence 00000 0000000011111111111111222 45899999999999999999999999999999999999999999444
Q ss_pred chHHHHHHHHHHHhhcC
Q 022960 256 QDELASLVIQFIKANYQ 272 (289)
Q Consensus 256 ~~~~~~~i~~fl~~~~~ 272 (289)
++++++.|.+||++.+.
T Consensus 234 ~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 234 LELVTEAVKEFMLEQIA 250 (251)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 57899999999998764
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=234.46 Aligned_cols=234 Identities=18% Similarity=0.180 Sum_probs=167.5
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~ 105 (289)
.+.+.||.+++|...+++.+|+||++||++.+... |..+.+.|++ +|+|+++|+||||.|+.+....+++.+++|+.
T Consensus 8 ~~~~~~g~~l~y~~~G~~~~p~lvl~hG~~~~~~~--w~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~a~dl~ 84 (266)
T 3om8_A 8 FLATSDGASLAYRLDGAAEKPLLALSNSIGTTLHM--WDAQLPALTR-HFRVLRYDARGHGASSVPPGPYTLARLGEDVL 84 (266)
T ss_dssp EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGG--GGGGHHHHHT-TCEEEEECCTTSTTSCCCCSCCCHHHHHHHHH
T ss_pred EEeccCCcEEEEEecCCCCCCEEEEeCCCccCHHH--HHHHHHHhhc-CcEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 45677999999887777778999999999998854 8999999987 59999999999999987766678899999999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc--ccccc--------chhHhhhhhcCc
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGI--EGRLG--------LGYLQRIKQNGF 174 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~--~~~~~--------~~~~~~~~~~~~ 174 (289)
++++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++........ ..... ...........+
T Consensus 85 ~~l~~l---~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T 3om8_A 85 ELLDAL---EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWF 161 (266)
T ss_dssp HHHHHT---TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSHHHHHHHHHHHS
T ss_pred HHHHHh---CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccccHHHHHHHHHHHhc
Confidence 999998 78899999999999999999999999 99999998754322110 00000 000000000000
Q ss_pred cc-cccccccc-------ccccChhhhhhh----hccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEE
Q 022960 175 ID-VRNKKGKL-------EYRVTQESLMDR----LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKL 242 (289)
Q Consensus 175 ~~-~~~~~~~~-------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 242 (289)
.. ........ ........+... ...+.... ..++++|+|+|+|++|.++|++.++.+.+.+|++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~a~~ 239 (266)
T 3om8_A 162 PPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQ--LARIERPTLVIAGAYDTVTAASHGELIAASIAGARL 239 (266)
T ss_dssp CHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTT--GGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEE
T ss_pred ChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhH--hcCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEE
Confidence 00 00000000 000000000000 00111111 225699999999999999999999999999999999
Q ss_pred EEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 243 HIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 243 ~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
++++ +||+++ ++|+++++.|.+||.
T Consensus 240 ~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 240 VTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp EEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred EEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 9998 799965 778899999999985
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-35 Score=229.46 Aligned_cols=235 Identities=20% Similarity=0.302 Sum_probs=163.0
Q ss_pred eeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHH
Q 022960 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRA 106 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~ 106 (289)
+.+.+|.++++..+++.++++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+....++..+++|+.+
T Consensus 4 ~~~~~g~~l~y~~~g~~~~~~vvllHG~~~~~~--~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~~~ 81 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRDAPVIHFHHGWPLSAD--DWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHYADDVAA 81 (276)
T ss_dssp EECTTSCEEEEEEESCTTSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred EECCCCcEEEEEecCCCCCCeEEEECCCCcchh--HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 456789999877776657789999999999885 499999999999999999999999999876556688999999999
Q ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCccccc---ccccccch----h-----------H
Q 022960 107 IVQDFCAKGRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKRG---IEGRLGLG----Y-----------L 166 (289)
Q Consensus 107 ~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~---~~~~~~~~----~-----------~ 166 (289)
+++.+ +.++++|+||||||.+++.+++.+ |+ |+++|++++....... ........ + .
T Consensus 82 ~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (276)
T 1zoi_A 82 VVAHL---GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFY 158 (276)
T ss_dssp HHHHH---TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHh---CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHhHHHHH
Confidence 99998 777899999999999999988887 88 9999999874321100 00000000 0 0
Q ss_pred hhhhhcCccccccccccccccc-----------Chhhhhhhh----ccchhhhhcccccCceEEEEEeCCCCccChh-hH
Q 022960 167 QRIKQNGFIDVRNKKGKLEYRV-----------TQESLMDRL----STDIHAACHMICQDCRVLTIHGTKDKMVPAE-DA 230 (289)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~ 230 (289)
..+....+.............. ........+ ..+..... .++++|+|+++|++|.++|++ ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~l~i~G~~D~~~~~~~~~ 236 (276)
T 1zoi_A 159 RDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDL--KGIQQPVLVMHGDDDQIVPYENSG 236 (276)
T ss_dssp HHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHH--HHCCSCEEEEEETTCSSSCSTTTH
T ss_pred HHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhc--cccCCCEEEEEcCCCcccChHHHH
Confidence 0000000000000000000000 000000000 01111111 246899999999999999988 55
Q ss_pred HHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 231 LEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
+.+.+.++++++++++++||.++ ++++++++.|.+||+
T Consensus 237 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 237 VLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp HHHHHHSTTEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred HHHHhhCCCceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 66778889999999999999965 678899999999985
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=226.26 Aligned_cols=231 Identities=22% Similarity=0.280 Sum_probs=162.6
Q ss_pred eeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHH
Q 022960 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRA 106 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~ 106 (289)
+.+.+|.++++..+++.++++|||+||++++.. .|..+++.|.++||+|+++|+||||.|..+....++.++++|+.+
T Consensus 3 ~~~~~g~~l~y~~~g~~~~~~vvllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~ 80 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSAD--DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAA 80 (275)
T ss_dssp EECTTSCEEEEEEESCTTSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred EEccCCCEEEEEEcCCCCCceEEEECCCCCchh--hHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCHHHHHHHHHH
Confidence 556789999877776667889999999999885 489999999999999999999999999876556688999999999
Q ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCccccc---ccccccchhH---------------
Q 022960 107 IVQDFCAKGRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKRG---IEGRLGLGYL--------------- 166 (289)
Q Consensus 107 ~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~---~~~~~~~~~~--------------- 166 (289)
+++.+ +.++++|+||||||.+++.+++.+ |+ |+++|++++....... ..........
T Consensus 81 ~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (275)
T 1a88_A 81 LTEAL---DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFY 157 (275)
T ss_dssp HHHHH---TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHc---CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhhHHHHH
Confidence 99998 777899999999999999988886 88 9999999874321100 0000000000
Q ss_pred hhhhhcCcccccccccccccccChhhhh---------------hhh----ccchhhhhcccccCceEEEEEeCCCCccCh
Q 022960 167 QRIKQNGFIDVRNKKGKLEYRVTQESLM---------------DRL----STDIHAACHMICQDCRVLTIHGTKDKMVPA 227 (289)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 227 (289)
..+....+...... . ......... ..+ ..+..... .++++|+|+++|++|.++|+
T Consensus 158 ~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~lii~G~~D~~~~~ 231 (275)
T 1a88_A 158 IDVPSGPFYGFNRE-G---ATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDL--KRIDVPVLVAHGTDDQVVPY 231 (275)
T ss_dssp HHHHHTTTTTTTST-T---CCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHH--HHCCSCEEEEEETTCSSSCS
T ss_pred HhhhccccccccCc-c---cccCHHHHHHHHHHhhhcchHhHHHHHhhhhhccccccc--ccCCCCEEEEecCCCccCCc
Confidence 00000000000000 0 000000000 000 00111111 24689999999999999998
Q ss_pred h-hHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 228 E-DALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 228 ~-~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
+ ..+.+.+.++++++++++++||+++ ++++++++.|.+||+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 232 ADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp TTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHHHHHHHhh
Confidence 8 4556777889999999999999965 678899999999996
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=229.56 Aligned_cols=257 Identities=16% Similarity=0.186 Sum_probs=179.8
Q ss_pred CCcccceeeE-EeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 16 QDPVVQRRRV-VIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 16 ~~~~~~~~~~-~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
....+..+++ .+.+.+|.++.++++.+. ++|+||++||++++.. .|..+++.|+++||.|+++|+||||.|....
T Consensus 28 ~~~~~~~~~~~~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~ 105 (342)
T 3hju_A 28 TPQSIPYQDLPHLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG--RYEELARMLMGLDLLVFAHDHVGHGQSEGER 105 (342)
T ss_dssp CTTSCBTTSSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG--GGHHHHHHHHTTTEEEEEECCTTSTTSCSST
T ss_pred CCCCcccccCceEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc--hHHHHHHHHHhCCCeEEEEcCCCCcCCCCcC
Confidence 3445666676 888899999999888654 5779999999999885 4899999999999999999999999998754
Q ss_pred -cccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc---hhH
Q 022960 93 -LYGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL---GYL 166 (289)
Q Consensus 93 -~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~---~~~ 166 (289)
...++..+++|+.++++++... +..+++|+|||+||.+++.++..+|+ |+++|++++.............. .+.
T Consensus 106 ~~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 185 (342)
T 3hju_A 106 MVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVL 185 (342)
T ss_dssp TCCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHHHH
Confidence 4557788899999999999776 45589999999999999999999998 99999999876654332211111 111
Q ss_pred hhhhhcCcccccccc-c---------------ccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhH
Q 022960 167 QRIKQNGFIDVRNKK-G---------------KLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDA 230 (289)
Q Consensus 167 ~~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 230 (289)
..+............ . ..........................++++|+|+++|++|.++|.+.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~ 265 (342)
T 3hju_A 186 NLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGA 265 (342)
T ss_dssp HHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHH
T ss_pred HHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHH
Confidence 111100000000000 0 000000000000000000000111224589999999999999999999
Q ss_pred HHHHhhCC--CcEEEEEcCCCcccccC-ch---HHHHHHHHHHHhhcCCC
Q 022960 231 LEFDKFIP--NHKLHIIEGADHEFTSH-QD---ELASLVIQFIKANYQKD 274 (289)
Q Consensus 231 ~~~~~~~~--~~~~~~~~~~gH~~~~~-~~---~~~~~i~~fl~~~~~~~ 274 (289)
+.+.+.++ ++++++++++||.++.+ ++ ++.+.+.+||++.+...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (342)
T 3hju_A 266 YLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATA 315 (342)
T ss_dssp HHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCCC
Confidence 99999998 78999999999997644 43 56677889998887543
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-34 Score=223.82 Aligned_cols=253 Identities=16% Similarity=0.207 Sum_probs=175.8
Q ss_pred ccceeeE-EeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-c
Q 022960 19 VVQRRRV-VIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-Y 94 (289)
Q Consensus 19 ~~~~~~~-~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~ 94 (289)
.++.+++ .+.+.+|.+++++++.+. ++|+||++||++++.. .|..+++.|.++||+|+++|+||||.|..... .
T Consensus 13 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 90 (303)
T 3pe6_A 13 SIPYQDLPHLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG--RYEELARMLMGLDLLVFAHDHVGHGQSEGERMVV 90 (303)
T ss_dssp SCBGGGSCEEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG--GGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCC
T ss_pred CcccCCCCeEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh--HHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCC
Confidence 4555565 788889999999888654 4689999999999885 48999999999999999999999999986543 3
Q ss_pred cchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhc
Q 022960 95 GNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQN 172 (289)
Q Consensus 95 ~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (289)
.++...++|+.++++++... +.++++++|||+||.+++.++..+|+ |+++|++++.............. ........
T Consensus 91 ~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~ 169 (303)
T 3pe6_A 91 SDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKV-LAAKVLNS 169 (303)
T ss_dssp SSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHH-HHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHH-HHHHHHHH
Confidence 57788899999999998766 45589999999999999999999998 99999999876654322211111 11111111
Q ss_pred Cccccccccccccc-ccChhh-------------------hhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHH
Q 022960 173 GFIDVRNKKGKLEY-RVTQES-------------------LMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE 232 (289)
Q Consensus 173 ~~~~~~~~~~~~~~-~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 232 (289)
.............+ ...... ................++++|+|+++|++|.+++.+.++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 249 (303)
T 3pe6_A 170 VLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYL 249 (303)
T ss_dssp TCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHHH
T ss_pred hcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHHH
Confidence 00000000000000 000000 0000000000011122458999999999999999999999
Q ss_pred HHhhCC--CcEEEEEcCCCcccccC-ch---HHHHHHHHHHHhhcCCC
Q 022960 233 FDKFIP--NHKLHIIEGADHEFTSH-QD---ELASLVIQFIKANYQKD 274 (289)
Q Consensus 233 ~~~~~~--~~~~~~~~~~gH~~~~~-~~---~~~~~i~~fl~~~~~~~ 274 (289)
+.+.++ ++++++++++||.++.+ ++ ++.+.+.+||++.+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~~ 297 (303)
T 3pe6_A 250 LMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATA 297 (303)
T ss_dssp HHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCCC
Confidence 999998 78999999999997644 43 56667888888876543
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=223.86 Aligned_cols=233 Identities=22% Similarity=0.327 Sum_probs=159.7
Q ss_pred eeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHH
Q 022960 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRA 106 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~ 106 (289)
+.+.+|.++++..+ +++++|||+||++++... |..+++.|+++||+|+++|+||||.|..+....+++.+++|+.+
T Consensus 3 ~~~~~g~~l~y~~~--g~~~~vvllHG~~~~~~~--~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~ 78 (273)
T 1a8s_A 3 FTTRDGTQIYYKDW--GSGQPIVFSHGWPLNADS--WESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQ 78 (273)
T ss_dssp EECTTSCEEEEEEE--SCSSEEEEECCTTCCGGG--GHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred EecCCCcEEEEEEc--CCCCEEEEECCCCCcHHH--HhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 55678888886544 467899999999998854 89999999999999999999999999876556688899999999
Q ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCccccc---ccccccchh---------------H
Q 022960 107 IVQDFCAKGRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKRG---IEGRLGLGY---------------L 166 (289)
Q Consensus 107 ~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~---~~~~~~~~~---------------~ 166 (289)
+++++ +.++++|+||||||.+++.+++.+ |+ |+++|++++....... ......... .
T Consensus 79 ~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
T 1a8s_A 79 LIEHL---DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLY 155 (273)
T ss_dssp HHHHT---TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh---CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhhHHHHH
Confidence 99988 778899999999999999988776 87 9999999864321100 000000000 0
Q ss_pred hhhhhcCccccccccccccccc-----------Chhhhhhh---h-ccchhhhhcccccCceEEEEEeCCCCccChh-hH
Q 022960 167 QRIKQNGFIDVRNKKGKLEYRV-----------TQESLMDR---L-STDIHAACHMICQDCRVLTIHGTKDKMVPAE-DA 230 (289)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~ 230 (289)
..+....+.............. ........ + ..+..... .++++|+|+++|++|.++|++ ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~lii~G~~D~~~~~~~~~ 233 (273)
T 1a8s_A 156 KDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDL--KKIDVPTLVVHGDADQVVPIEASG 233 (273)
T ss_dssp HHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHH--HTCCSCEEEEEETTCSSSCSTTTH
T ss_pred HHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhh--hcCCCCEEEEECCCCccCChHHHH
Confidence 0000000000000000000000 00000000 0 00111111 246899999999999999988 45
Q ss_pred HHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 231 LEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
+.+.+.++++++++++++||+++ ++++++++.|.+||+
T Consensus 234 ~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 234 IASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcEEEEeCCCCCcchhhCHHHHHHHHHHHHh
Confidence 66778889999999999999965 678899999999996
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=227.18 Aligned_cols=233 Identities=21% Similarity=0.324 Sum_probs=160.0
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~ 105 (289)
++.+.||.+++|..+ |++++|||+||++++... |..+++.|.++||+|+++|+||||.|+.+....++..+++|+.
T Consensus 2 ~~~~~~g~~l~y~~~--G~g~~vvllHG~~~~~~~--w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~d~~ 77 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDW--GSGKPVLFSHGWLLDADM--WEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIA 77 (271)
T ss_dssp EEECTTSCEEEEEEE--SSSSEEEEECCTTCCGGG--GHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred eEEcCCCCEEEEEcc--CCCCeEEEECCCCCcHHH--HHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCHHHHHHHHH
Confidence 356788999986655 466889999999999854 9999999998899999999999999987766678899999999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCccccc---ccccccchhHhhhh----hc----
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKRG---IEGRLGLGYLQRIK----QN---- 172 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~----~~---- 172 (289)
++++.+ +.++++|+||||||.+++.+++.+ |+ |+++|++++....... ............+. ..
T Consensus 78 ~~l~~l---~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T 3ia2_A 78 QLIEHL---DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQF 154 (271)
T ss_dssp HHHHHH---TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh---CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhhHHHH
Confidence 999998 778999999999999777766665 77 9999999864322110 00000000000000 00
Q ss_pred ------Ccccccccccccccc-----------cChhhhhh----hhccchhhhhcccccCceEEEEEeCCCCccChhh-H
Q 022960 173 ------GFIDVRNKKGKLEYR-----------VTQESLMD----RLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED-A 230 (289)
Q Consensus 173 ------~~~~~~~~~~~~~~~-----------~~~~~~~~----~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~ 230 (289)
.+...... ...... ........ ....+..... .++++|+|+++|++|.++|++. .
T Consensus 155 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~Lvi~G~~D~~~p~~~~~ 231 (271)
T 3ia2_A 155 ISDFNAPFYGINKG-QVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDM--AKIDVPTLVIHGDGDQIVPFETTG 231 (271)
T ss_dssp HHHHHHHHHTGGGT-CCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHH--TTCCSCEEEEEETTCSSSCGGGTH
T ss_pred HHHhhHhhhccccc-cccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccc--cCCCCCEEEEEeCCCCcCChHHHH
Confidence 00000000 000000 00000000 0001111111 2469999999999999999987 4
Q ss_pred HHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 231 LEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
+.+.+.++++++.+++++||+++ ++++++++.|.+||+
T Consensus 232 ~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 232 KVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270 (271)
T ss_dssp HHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred HHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHHHHhh
Confidence 55677789999999999999965 778899999999985
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=231.47 Aligned_cols=233 Identities=22% Similarity=0.317 Sum_probs=159.6
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~ 105 (289)
.....+|.+++|. ..|++++|||+||++++... |..+.+.|.++||+|+++|+||||.|+.+....+++.+++|+.
T Consensus 10 ~~~~~~g~~l~y~--~~G~g~~vvllHG~~~~~~~--w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~ 85 (281)
T 3fob_A 10 GTENQAPIEIYYE--DHGTGKPVVLIHGWPLSGRS--WEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLH 85 (281)
T ss_dssp EEETTEEEEEEEE--EESSSEEEEEECCTTCCGGG--GTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred cCCCCCceEEEEE--ECCCCCeEEEECCCCCcHHH--HHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHHH
Confidence 3345667777744 44567899999999999854 8889999998899999999999999988766678899999999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCccccc---ccc-ccc----chh----------
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKRG---IEG-RLG----LGY---------- 165 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~---~~~-~~~----~~~---------- 165 (289)
++++.+ +.++++|+||||||.+++.+++.+ |+ ++++|++++....... ... ... ..+
T Consensus 86 ~ll~~l---~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (281)
T 3fob_A 86 QLLEQL---ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLA 162 (281)
T ss_dssp HHHHHT---TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc---CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHH
Confidence 999988 788999999999999888877765 77 9999999864321100 000 000 000
Q ss_pred -HhhhhhcCccccccccccccc-----------ccChhhhhhhh----ccchhhhhcccccCceEEEEEeCCCCccChhh
Q 022960 166 -LQRIKQNGFIDVRNKKGKLEY-----------RVTQESLMDRL----STDIHAACHMICQDCRVLTIHGTKDKMVPAED 229 (289)
Q Consensus 166 -~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 229 (289)
...+... +............ ..........+ ..+..... .++++|+|+|+|++|.++|++.
T Consensus 163 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l--~~i~~P~Lii~G~~D~~~p~~~ 239 (281)
T 3fob_A 163 FLDEFTKG-FFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDL--EKFNIPTLIIHGDSDATVPFEY 239 (281)
T ss_dssp HHHHHHHH-HTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHH--TTCCSCEEEEEETTCSSSCGGG
T ss_pred HHHHHHHH-hcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhh--hhcCCCEEEEecCCCCCcCHHH
Confidence 0000000 0000000000000 00000000000 11111122 2568999999999999999987
Q ss_pred H-HHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 230 A-LEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 230 ~-~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
+ +.+.+.+|++++++++++||+++ ++++++++.|.+||+
T Consensus 240 ~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 240 SGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp THHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 6 77788899999999999999965 778999999999985
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=233.06 Aligned_cols=231 Identities=12% Similarity=0.073 Sum_probs=159.9
Q ss_pred ceEEEEEeecCC-CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchHHHHHHHHHHHH
Q 022960 33 EKLVGILHETGS-KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 33 ~~l~~~~~~~~~-~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~~~i~ 109 (289)
.+++|...++++ +|+|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+. ..++++.+++|+.++++
T Consensus 34 ~~l~y~~~G~~~~g~~vvllHG~~~~~~--~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~y~~~~~a~dl~~ll~ 111 (310)
T 1b6g_A 34 LRAHYLDEGNSDAEDVFLCLHGEPTWSY--LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIE 111 (310)
T ss_dssp CEEEEEEEECTTCSCEEEECCCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCCCCEEEEECCCCCchh--hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHH
Confidence 889877766556 899999999999885 4899999999989999999999999998654 35688999999999999
Q ss_pred HHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc----------ccccccchhHhhhhhcC-c---
Q 022960 110 DFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG----------IEGRLGLGYLQRIKQNG-F--- 174 (289)
Q Consensus 110 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~--- 174 (289)
.+ ++++++|+||||||.+|+.+|.++|+ |+++|++++....... ........+........ .
T Consensus 112 ~l---~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (310)
T 1b6g_A 112 RL---DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLD 188 (310)
T ss_dssp HH---TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSCSSCCHH
T ss_pred Hc---CCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHHhccCchhhhh
Confidence 99 88899999999999999999999999 9999999875421000 00000000000000000 0
Q ss_pred -------ccccc--------cccccccccChhhhhhhh-ccch-------hhhhccc-ccCceEEEEEeCCCCccChhhH
Q 022960 175 -------IDVRN--------KKGKLEYRVTQESLMDRL-STDI-------HAACHMI-CQDCRVLTIHGTKDKMVPAEDA 230 (289)
Q Consensus 175 -------~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~-~~~~P~l~i~g~~D~~~~~~~~ 230 (289)
..... .............+.... .... ....... ++++|+|+|+|++|.++| +.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~ 267 (310)
T 1b6g_A 189 QFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG-PDV 267 (310)
T ss_dssp HHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS-HHH
T ss_pred hHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEeccCcchhh-hHH
Confidence 00000 000000000000000000 0000 0001112 569999999999999999 888
Q ss_pred HHHHhhCCCcEEEEE--cCCCcccccCchHHHHHHHHHHHh
Q 022960 231 LEFDKFIPNHKLHII--EGADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
+.+.+.+|+++++++ +++||+++.+++++++.|.+||++
T Consensus 268 ~~~~~~ip~~~~~~i~~~~~GH~~~~~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 268 MYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAE 308 (310)
T ss_dssp HHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHH
T ss_pred HHHHHhcccccceeeecCCcccchhhChHHHHHHHHHHHhc
Confidence 999999999988877 999999655678999999999975
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=221.25 Aligned_cols=243 Identities=21% Similarity=0.353 Sum_probs=173.0
Q ss_pred eeeEEe-eCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchH
Q 022960 22 RRRVVI-PNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98 (289)
Q Consensus 22 ~~~~~~-~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~ 98 (289)
.+.+.+ .+.+|.++++..+.+. ++|+||++||++++...+.+..+.+.|.+.||.|+++|+||||.|.......++.
T Consensus 11 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~ 90 (270)
T 3llc_A 11 THAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDGTIS 90 (270)
T ss_dssp EEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGGCCHH
T ss_pred cceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCccccccHH
Confidence 344444 5668999987755544 2899999999999876544556888888889999999999999999887777889
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHh---CC---C-ccEEEEeccCCcccccc-cccccchhHhhhh
Q 022960 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASK---YN---D-ISIVINISGRFNLKRGI-EGRLGLGYLQRIK 170 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~---~p---~-v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~ 170 (289)
++++|+.++++++ +.++++++|||+||.+++.++.. +| + |+++|++++........ ...........+.
T Consensus 91 ~~~~d~~~~~~~l---~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (270)
T 3llc_A 91 RWLEEALAVLDHF---KPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELA 167 (270)
T ss_dssp HHHHHHHHHHHHH---CCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHHHHHH
T ss_pred HHHHHHHHHHHHh---ccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhhhhhhhhhh
Confidence 9999999999999 67799999999999999999999 99 7 99999999977654322 1122222222222
Q ss_pred hcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC--cEEEEEcCC
Q 022960 171 QNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN--HKLHIIEGA 248 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~ 248 (289)
......................+........... ..++++|+++++|++|.++|.+.++.+.+.+++ +++++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (270)
T 3llc_A 168 ENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAG--MIDTGCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDG 245 (270)
T ss_dssp HHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTS--CCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTC
T ss_pred ccCcccChhhcccchhHHHHHHHhhhhhhhhhhh--hhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCC
Confidence 2222211111111111111111111111111111 224589999999999999999999999999988 999999999
Q ss_pred Ccccc--cCchHHHHHHHHHHHh
Q 022960 249 DHEFT--SHQDELASLVIQFIKA 269 (289)
Q Consensus 249 gH~~~--~~~~~~~~~i~~fl~~ 269 (289)
||.+. +..+++.+.|.+||++
T Consensus 246 gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 246 DHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp CSSCCSHHHHHHHHHHHHHHHC-
T ss_pred cccccccccHHHHHHHHHHHhcC
Confidence 99754 3346788888888864
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=229.18 Aligned_cols=236 Identities=12% Similarity=0.032 Sum_probs=163.7
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCC-Ccc--ccchHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEG-SFL--YGNYRREAE 102 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~-~~~--~~~~~~~~~ 102 (289)
.+...+|.++++..+++.++|+|||+||++++... .|..+++.|++ ||+|+++|+||||.|+. +.. ..+++.+++
T Consensus 6 ~~~~~~g~~l~~~~~G~~~~~~vvllHG~~~~~~~-~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~a~ 83 (286)
T 2yys_A 6 GYVPVGEAELYVEDVGPVEGPALFVLHGGPGGNAY-VLREGLQDYLE-GFRVVYFDQRGSGRSLELPQDPRLFTVDALVE 83 (286)
T ss_dssp EEEECSSCEEEEEEESCTTSCEEEEECCTTTCCSH-HHHHHHGGGCT-TSEEEEECCTTSTTSCCCCSCGGGCCHHHHHH
T ss_pred eEEeECCEEEEEEeecCCCCCEEEEECCCCCcchh-HHHHHHHHhcC-CCEEEEECCCCCCCCCCCccCcccCcHHHHHH
Confidence 34446788998777766578899999999999850 38999999954 79999999999999987 444 568899999
Q ss_pred HHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccc-----------cchhHhhhhh
Q 022960 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRL-----------GLGYLQRIKQ 171 (289)
Q Consensus 103 d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 171 (289)
|+.++++.+ +.++++|+||||||.+|+.+|.++|+|+++|++++............ ...+...+..
T Consensus 84 dl~~ll~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T 2yys_A 84 DTLLLAEAL---GVERFGLLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENLKEALKR 160 (286)
T ss_dssp HHHHHHHHT---TCCSEEEEEETTHHHHHHHHHHHCTTEEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHh---CCCcEEEEEeCHHHHHHHHHHHhCcchheEEEeCCccCcHHHHHHHHHHhccccchhHHHHHHHHhcc
Confidence 999999998 77899999999999999999999988999999998652211000000 0000000000
Q ss_pred cCcc----c--ccccc-------cccccc-c-C---hhhh-hhhh-ccchhhhhcccccCceEEEEEeCCCCccChhhHH
Q 022960 172 NGFI----D--VRNKK-------GKLEYR-V-T---QESL-MDRL-STDIHAACHMICQDCRVLTIHGTKDKMVPAEDAL 231 (289)
Q Consensus 172 ~~~~----~--~~~~~-------~~~~~~-~-~---~~~~-~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 231 (289)
.... . ..... ....+. . . ...+ .... ..+... ...++++|+|+++|++|.++|.+ ++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~lvi~G~~D~~~~~~-~~ 237 (286)
T 2yys_A 161 EEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTP--YLTPERRPLYVLVGERDGTSYPY-AE 237 (286)
T ss_dssp SCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGG--GCCCCSSCEEEEEETTCTTTTTT-HH
T ss_pred CChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhh--hhhhcCCCEEEEEeCCCCcCCHh-HH
Confidence 0000 0 00000 000000 0 0 0000 0000 001111 12246899999999999999999 99
Q ss_pred HHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 232 EFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 232 ~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
.+.+ ++++++++++++||+++ +.++++++.|.+||++.
T Consensus 238 ~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 238 EVAS-RLRAPIRVLPEAGHYLWIDAPEAFEEAFKEALAAL 276 (286)
T ss_dssp HHHH-HHTCCEEEETTCCSSHHHHCHHHHHHHHHHHHHTT
T ss_pred HHHh-CCCCCEEEeCCCCCCcChhhHHHHHHHHHHHHHhh
Confidence 9999 99999999999999965 67789999999999864
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=230.82 Aligned_cols=227 Identities=10% Similarity=0.051 Sum_probs=156.9
Q ss_pred ceEEEEEeecCC-CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc--ccchHHHHHHHHHHHH
Q 022960 33 EKLVGILHETGS-KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL--YGNYRREAEDLRAIVQ 109 (289)
Q Consensus 33 ~~l~~~~~~~~~-~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~d~~~~i~ 109 (289)
.+++|...++++ +++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+.. .+++..+++|+.++++
T Consensus 33 ~~l~y~~~G~~~~g~~vvllHG~~~~~~--~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ll~ 110 (297)
T 2xt0_A 33 LRMHYVDEGPRDAEHTFLCLHGEPSWSF--LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLD 110 (297)
T ss_dssp CCEEEEEESCTTCSCEEEEECCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHH
T ss_pred eEEEEEEccCCCCCCeEEEECCCCCcce--eHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 889877666545 889999999999884 48999999999899999999999999986543 5688999999999999
Q ss_pred HHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhh-----------hcCcccc
Q 022960 110 DFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIK-----------QNGFIDV 177 (289)
Q Consensus 110 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 177 (289)
.+ ++++++|+||||||.+|+.+|.++|+ |+++|++++........... ...+..... .......
T Consensus 111 ~l---~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (297)
T 2xt0_A 111 AL---QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKG-FESWRDFVANSPDLDVGKLMQRAIPGI 186 (297)
T ss_dssp HH---TCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHH-HHHHHHHHHTCTTCCHHHHHHHHSTTC
T ss_pred Hh---CCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchh-HHHHHHHhhcccccchhHHHhccCccC
Confidence 99 88899999999999999999999999 99999999854211100000 000000000 0000000
Q ss_pred c--------ccccccccccChhhhhhhhc-----------cchhhhhccc-ccCceEEEEEeCCCCccChhhHHHHHhhC
Q 022960 178 R--------NKKGKLEYRVTQESLMDRLS-----------TDIHAACHMI-CQDCRVLTIHGTKDKMVPAEDALEFDKFI 237 (289)
Q Consensus 178 ~--------~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 237 (289)
. ..............+..... .+... ... ++++|+|+|+|++|.++| +..+.+.+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~~ 263 (297)
T 2xt0_A 187 TDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMS--FWSTQWSGPTFMAVGAQDPVLG-PEVMGMLRQA 263 (297)
T ss_dssp CHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHH--HHHHTCCSCEEEEEETTCSSSS-HHHHHHHHHH
T ss_pred CHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHH--HhhhccCCCeEEEEeCCCcccC-hHHHHHHHhC
Confidence 0 00000000000000000000 00011 112 469999999999999998 8888999999
Q ss_pred CCcEEEE--EcCCCcccccCchHHHHHHHHHHH
Q 022960 238 PNHKLHI--IEGADHEFTSHQDELASLVIQFIK 268 (289)
Q Consensus 238 ~~~~~~~--~~~~gH~~~~~~~~~~~~i~~fl~ 268 (289)
|++++.+ ++++||+++.+++++++.|.+||+
T Consensus 264 p~~~~~~~~~~~~GH~~~~~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 264 IRGCPEPMIVEAGGHFVQEHGEPIARAALAAFG 296 (297)
T ss_dssp STTCCCCEEETTCCSSGGGGCHHHHHHHHHHTT
T ss_pred CCCeeEEeccCCCCcCcccCHHHHHHHHHHHHh
Confidence 9887654 789999965577899999999984
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=224.80 Aligned_cols=231 Identities=26% Similarity=0.364 Sum_probs=161.2
Q ss_pred CCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHH
Q 022960 29 NSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV 108 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 108 (289)
..+|.++++..+ +++++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+....+++.+++|+.+++
T Consensus 9 ~~~g~~l~y~~~--g~g~pvvllHG~~~~~~--~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~~l 84 (277)
T 1brt_A 9 NSTSIDLYYEDH--GTGQPVVLIHGFPLSGH--SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVL 84 (277)
T ss_dssp TTEEEEEEEEEE--CSSSEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred cCCCcEEEEEEc--CCCCeEEEECCCCCcHH--HHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence 456777876544 45678999999999885 49999999999999999999999999987766678899999999999
Q ss_pred HHHHhcCCceEEEEEeChhHHHHHHHHHhCCC--ccEEEEeccCCcccccc-cc--c-ccchhH----hhhhhcC-----
Q 022960 109 QDFCAKGRVITAIIGHSKGGNAVLLYASKYND--ISIVINISGRFNLKRGI-EG--R-LGLGYL----QRIKQNG----- 173 (289)
Q Consensus 109 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~-~~--~-~~~~~~----~~~~~~~----- 173 (289)
+.+ +.++++|+||||||.+++.+|.++|+ |+++|++++........ .. . ...... ..+....
T Consensus 85 ~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (277)
T 1brt_A 85 ETL---DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYT 161 (277)
T ss_dssp HHH---TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHH
T ss_pred HHh---CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHH
Confidence 998 77899999999999999999999985 99999998743211000 00 0 000000 0000000
Q ss_pred -c-ccccccccccccccChhh---------------hhhhh---ccchhhhhcccccCceEEEEEeCCCCccChhhH-HH
Q 022960 174 -F-IDVRNKKGKLEYRVTQES---------------LMDRL---STDIHAACHMICQDCRVLTIHGTKDKMVPAEDA-LE 232 (289)
Q Consensus 174 -~-~~~~~~~~~~~~~~~~~~---------------~~~~~---~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~ 232 (289)
+ .................. ....+ ..+.... ..++++|+|+++|++|.++|++.+ +.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~lii~G~~D~~~~~~~~~~~ 239 (277)
T 1brt_A 162 GFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRAD--IPRIDVPALILHGTGDRTLPIENTARV 239 (277)
T ss_dssp HHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTT--GGGCCSCEEEEEETTCSSSCGGGTHHH
T ss_pred HHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhh--cccCCCCeEEEecCCCccCChHHHHHH
Confidence 0 000000000000000000 00000 1111111 224689999999999999999988 99
Q ss_pred HHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 233 FDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 233 ~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
+.+.++++++++++++||+++ ++++++++.|.+||+
T Consensus 240 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 240 FHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLA 276 (277)
T ss_dssp HHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred HHHHCCCCcEEEeCCCCcchhhhCHHHHHHHHHHHHh
Confidence 999999999999999999965 678899999999996
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=227.46 Aligned_cols=231 Identities=16% Similarity=0.187 Sum_probs=163.0
Q ss_pred CCCceEEEEEeecCC--CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGS--KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI 107 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~--~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~ 107 (289)
.+|.+++|..+++++ +|+|||+||++++... |..+++.|++. |+|+++|+||||.|..+....++.++++|+.++
T Consensus 9 ~~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~~--~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~ 85 (266)
T 2xua_A 9 VNGTELHYRIDGERHGNAPWIVLSNSLGTDLSM--WAPQVAALSKH-FRVLRYDTRGHGHSEAPKGPYTIEQLTGDVLGL 85 (266)
T ss_dssp CSSSEEEEEEESCSSSCCCEEEEECCTTCCGGG--GGGGHHHHHTT-SEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHH
T ss_pred ECCEEEEEEEcCCccCCCCeEEEecCccCCHHH--HHHHHHHHhcC-eEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 478899987776645 8999999999998854 89999999865 999999999999998766567889999999999
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc--ccccc-------cchhHhhhhhcCccc-
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG--IEGRL-------GLGYLQRIKQNGFID- 176 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~- 176 (289)
++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++....... ..... ............+..
T Consensus 86 l~~l---~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (266)
T 2xua_A 86 MDTL---KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALADAVLPRWFTAD 162 (266)
T ss_dssp HHHT---TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHHHHHHHHSCHH
T ss_pred HHhc---CCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHHHHHHHHcCcc
Confidence 9988 77799999999999999999999999 9999999876543211 00000 000000000000000
Q ss_pred ccccccc--ccc-----ccChhhhhhh---h-ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEE
Q 022960 177 VRNKKGK--LEY-----RVTQESLMDR---L-STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHII 245 (289)
Q Consensus 177 ~~~~~~~--~~~-----~~~~~~~~~~---~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (289)
....... ..+ ......+... + ..+.... ..++++|+|+++|++|.++|++.++.+.+.+++++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 240 (266)
T 2xua_A 163 YMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPE--APGIKVPALVISGTHDLAATPAQGRELAQAIAGARYVEL 240 (266)
T ss_dssp HHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGG--GGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEE
T ss_pred cccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhh--hccCCCCEEEEEcCCCCcCCHHHHHHHHHhCCCCEEEEe
Confidence 0000000 000 0000000000 0 0111111 224689999999999999999999999999999999999
Q ss_pred cCCCcccc-cCchHHHHHHHHHHHh
Q 022960 246 EGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 246 ~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+ +||+++ ++++++++.|.+||++
T Consensus 241 ~-~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 241 D-ASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp S-CCSSHHHHTHHHHHHHHHHHHTC
T ss_pred c-CCCCchhcCHHHHHHHHHHHHHh
Confidence 9 999965 6688999999999964
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=222.31 Aligned_cols=242 Identities=26% Similarity=0.370 Sum_probs=174.3
Q ss_pred ceeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchH
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~ 98 (289)
..+++.+. .+|.++.++++.+. ++|+||++||++++.....|..+++.|+++||.|+++|+||||.|.......++.
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~ 99 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVL 99 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHH
T ss_pred cceEEEec-cCCEEEEEEEEcCCCCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCccCHH
Confidence 34455555 57889999888764 4789999999998853356899999999999999999999999999877777888
Q ss_pred HHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCccc
Q 022960 99 REAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID 176 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (289)
.+++|+.++++++.+. +.++++|+|||+||.+++.++..+|+ |+++|+++|................ .......
T Consensus 100 ~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~-- 175 (270)
T 3pfb_A 100 NEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGV--TYNPDHI-- 175 (270)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTE--ECCTTSC--
T ss_pred HHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhcc--ccCcccc--
Confidence 9999999999999776 56799999999999999999999998 9999999987654321111100000 0000000
Q ss_pred ccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cC
Q 022960 177 VRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SH 255 (289)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~ 255 (289)
......................+...... ++++|+|+++|++|.++|.+.++.+.+.++++++++++++||.++ +.
T Consensus 176 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 252 (270)
T 3pfb_A 176 -PDRLPFKDLTLGGFYLRIAQQLPIYEVSA--QFTKPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSY 252 (270)
T ss_dssp -CSEEEETTEEEEHHHHHHHHHCCHHHHHT--TCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEETTCCTTCCTHH
T ss_pred -cccccccccccchhHhhcccccCHHHHHh--hCCccEEEEEcCCCCCCCHHHHHHHHHhCCCCeEEEcCCCCcccCccc
Confidence 00000000000111111111111112222 458999999999999999999999999999999999999999976 44
Q ss_pred chHHHHHHHHHHHhh
Q 022960 256 QDELASLVIQFIKAN 270 (289)
Q Consensus 256 ~~~~~~~i~~fl~~~ 270 (289)
++++.+.|.+||++.
T Consensus 253 ~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 253 QKNAVNLTTDFLQNN 267 (270)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHHhhc
Confidence 688999999999764
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-35 Score=226.49 Aligned_cols=229 Identities=15% Similarity=0.229 Sum_probs=159.2
Q ss_pred EEEEEeec--CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHHHHHHH
Q 022960 35 LVGILHET--GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQDF 111 (289)
Q Consensus 35 l~~~~~~~--~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l 111 (289)
++|...++ +++|+|||+||++++.. .|..+.+.|++ +|+|+++|+||||.|+... ...+++++++|+.++++.+
T Consensus 3 i~y~~~g~~~~~~~~vvllHG~~~~~~--~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l 79 (268)
T 3v48_A 3 MKLSLSPPPYADAPVVVLISGLGGSGS--YWLPQLAVLEQ-EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAA 79 (268)
T ss_dssp SCCEECCCSSTTCCEEEEECCTTCCGG--GGHHHHHHHHT-TSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHHT
T ss_pred eEEEecCCCCCCCCEEEEeCCCCccHH--HHHHHHHHHhh-cCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHHc
Confidence 34444443 36899999999999985 49999999977 5999999999999998654 3468899999999999988
Q ss_pred HhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc--chhHh-----hhhh-cC---cc-ccc
Q 022960 112 CAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG--LGYLQ-----RIKQ-NG---FI-DVR 178 (289)
Q Consensus 112 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~--~~~~~-----~~~~-~~---~~-~~~ 178 (289)
+.++++|+||||||.+|+.+|.++|+ |+++|++++............. ..... .... .. +. ...
T Consensus 80 ---~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (268)
T 3v48_A 80 ---GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWM 156 (268)
T ss_dssp ---TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred ---CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhh
Confidence 78899999999999999999999999 9999999886543211110000 00000 0000 00 00 000
Q ss_pred cccc-cc--------ccccChhhhhh----hhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEE
Q 022960 179 NKKG-KL--------EYRVTQESLMD----RLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHII 245 (289)
Q Consensus 179 ~~~~-~~--------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (289)
.... .. ........+.. ....+.... ..++++|+|+|+|++|.++|++.++.+.+.+|+++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~~~~~~~ 234 (268)
T 3v48_A 157 AARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHH--ADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVM 234 (268)
T ss_dssp HTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTT--GGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSSEEEEEE
T ss_pred hcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhh--hhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCcCeEEEe
Confidence 0000 00 00000000110 011111111 225689999999999999999999999999999999999
Q ss_pred cCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 246 EGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 246 ~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
+++||+++ ++++++++.|.+||.+.+
T Consensus 235 ~~~GH~~~~e~p~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 235 PYGGHACNVTDPETFNALLLNGLASLL 261 (268)
T ss_dssp SSCCTTHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCCcchhhcCHHHHHHHHHHHHHHhc
Confidence 99999965 778999999999998754
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=222.78 Aligned_cols=233 Identities=19% Similarity=0.296 Sum_probs=158.6
Q ss_pred eeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHH
Q 022960 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRA 106 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~ 106 (289)
+.+.+|.++++..+ +++++|||+||++++.. .|..+++.|.++||+|+++|+||||.|..+....++..+++|+.+
T Consensus 3 ~~~~~g~~l~y~~~--g~g~~vvllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~ 78 (274)
T 1a8q_A 3 CTTRDGVEIFYKDW--GQGRPVVFIHGWPLNGD--AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLND 78 (274)
T ss_dssp EECTTSCEEEEEEE--CSSSEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred EEccCCCEEEEEec--CCCceEEEECCCcchHH--HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcHHHHHHHHHH
Confidence 45678888886544 46789999999999885 489999999999999999999999999876556688899999999
Q ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCcccc---cccccccchhHh----hhhh------
Q 022960 107 IVQDFCAKGRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKR---GIEGRLGLGYLQ----RIKQ------ 171 (289)
Q Consensus 107 ~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~---~~~~~~~~~~~~----~~~~------ 171 (289)
+++.+ +.++++|+||||||.+++.+++.+ |+ |+++|++++...... ............ .+..
T Consensus 79 ~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (274)
T 1a8q_A 79 LLTDL---DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFW 155 (274)
T ss_dssp HHHHT---TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHc---CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhccHHHHH
Confidence 99988 777899999999999999988776 87 999999986432110 000000000000 0000
Q ss_pred -c---Ccccccccccccccc-----------cChhhhhhh---h-ccchhhhhcccccCceEEEEEeCCCCccChh-hHH
Q 022960 172 -N---GFIDVRNKKGKLEYR-----------VTQESLMDR---L-STDIHAACHMICQDCRVLTIHGTKDKMVPAE-DAL 231 (289)
Q Consensus 172 -~---~~~~~~~~~~~~~~~-----------~~~~~~~~~---~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~ 231 (289)
. .+............. ......... + ..+.... ..++++|+|+++|++|.++|++ ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~lii~G~~D~~~~~~~~~~ 233 (274)
T 1a8q_A 156 KDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTED--LKKFDIPTLVVHGDDDQVVPIDATGR 233 (274)
T ss_dssp HHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHH--HTTCCSCEEEEEETTCSSSCGGGTHH
T ss_pred HHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHH--hhcCCCCEEEEecCcCCCCCcHHHHH
Confidence 0 000000000000000 000000000 0 0111111 1246899999999999999988 455
Q ss_pred HHHhhCCCcEEEEEcCCCcccc-c--CchHHHHHHHHHHH
Q 022960 232 EFDKFIPNHKLHIIEGADHEFT-S--HQDELASLVIQFIK 268 (289)
Q Consensus 232 ~~~~~~~~~~~~~~~~~gH~~~-~--~~~~~~~~i~~fl~ 268 (289)
.+.+.++++++++++++||+++ + +++++++.|.+||+
T Consensus 234 ~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 234 KSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp HHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred HHHhhCCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 6778889999999999999976 4 46889999999985
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=223.42 Aligned_cols=241 Identities=19% Similarity=0.239 Sum_probs=156.8
Q ss_pred eeEEeeCCCCceEEEEEeecC-----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccC-CCCCCCccccc
Q 022960 23 RRVVIPNSHGEKLVGILHETG-----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGN-GESEGSFLYGN 96 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~-----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-G~s~~~~~~~~ 96 (289)
+...+.+.+|.+++++.+.+. ++|+||++||++++... |..+++.|+++||+|+++|+||| |.|++.....+
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~~--~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~~~~ 85 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDH--FAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFT 85 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGG--GHHHHHHHHTTTCCEEEECCCBCC--------CCC
T ss_pred eEEEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCchH--HHHHHHHHHHCCCEEEEeeCCCCCCCCCCccccee
Confidence 455677778999998877642 46899999999998854 99999999999999999999999 99987655667
Q ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCccc
Q 022960 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID 176 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (289)
+..+++|+.++++++...+.++++|+||||||.+|+.+|.+ |.|+++|++++...............+.. .....
T Consensus 86 ~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~----~~~~~ 160 (305)
T 1tht_A 86 MTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-LELSFLITAVGVVNLRDTLEKALGFDYLS----LPIDE 160 (305)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-SCCSEEEEESCCSCHHHHHHHHHSSCGGG----SCGGG
T ss_pred hHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-cCcCEEEEecCchhHHHHHHHHhhhhhhh----cchhh
Confidence 78889999999999976677899999999999999999988 58999999887543221111000000000 00000
Q ss_pred ccccccccccccChhhhh-hhhccc---h-hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC--CCcEEEEEcCCC
Q 022960 177 VRNKKGKLEYRVTQESLM-DRLSTD---I-HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI--PNHKLHIIEGAD 249 (289)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~---~-~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~g 249 (289)
................+. ...... . .......++++|+|+++|++|.++|++.++.+++.+ +++++++++++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~ag 240 (305)
T 1tht_A 161 LPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSS 240 (305)
T ss_dssp CCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCC
T ss_pred CcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 000000000000011111 000000 0 001112246899999999999999999999999987 478999999999
Q ss_pred cccccCchH---HHHHHHHHHHhh
Q 022960 250 HEFTSHQDE---LASLVIQFIKAN 270 (289)
Q Consensus 250 H~~~~~~~~---~~~~i~~fl~~~ 270 (289)
|.++++++. +.+.+.+|....
T Consensus 241 H~~~e~p~~~~~fl~~~~~~~~~~ 264 (305)
T 1tht_A 241 HDLGENLVVLRNFYQSVTKAAIAM 264 (305)
T ss_dssp SCTTSSHHHHHHHHHHHHHHHHHH
T ss_pred CchhhCchHHHHHHHHHHHHHHHh
Confidence 998765542 344444454433
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=221.05 Aligned_cols=232 Identities=17% Similarity=0.199 Sum_probs=161.8
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHH-HHHHHHHcCccEEEEccccCCCCCC--C-ccccchHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVN-LAAALEREGISAFRFDFSGNGESEG--S-FLYGNYRREAEDLR 105 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~-~~~~l~~~G~~v~~~d~~G~G~s~~--~-~~~~~~~~~~~d~~ 105 (289)
.+|.++++..++++++|+||++||++++... |.. +++.|+++||+|+++|+||||.|+. + ....++.++++|+.
T Consensus 8 ~~g~~l~y~~~G~~~~~~vvllHG~~~~~~~--w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a~dl~ 85 (298)
T 1q0r_A 8 SGDVELWSDDFGDPADPALLLVMGGNLSALG--WPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAV 85 (298)
T ss_dssp ETTEEEEEEEESCTTSCEEEEECCTTCCGGG--SCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHHH
T ss_pred cCCeEEEEEeccCCCCCeEEEEcCCCCCccc--hHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHHHHHH
Confidence 4788898777766578899999999998854 765 5699999899999999999999986 2 23467889999999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC-ccccc---------------ccccccchhHhh
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRF-NLKRG---------------IEGRLGLGYLQR 168 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~-~~~~~---------------~~~~~~~~~~~~ 168 (289)
++++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++.. ..... .... .......
T Consensus 86 ~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 161 (298)
T 1q0r_A 86 AVLDGW---GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGP-QQPFLDA 161 (298)
T ss_dssp HHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCC-CHHHHHH
T ss_pred HHHHHh---CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccc-cHHHHHH
Confidence 999998 78899999999999999999999999 99999998754 21000 0000 0000000
Q ss_pred hhh-----cCc---cc----ccccccccccccChh-----------------hh-hhh--h--ccchhhhhcccccCceE
Q 022960 169 IKQ-----NGF---ID----VRNKKGKLEYRVTQE-----------------SL-MDR--L--STDIHAACHMICQDCRV 214 (289)
Q Consensus 169 ~~~-----~~~---~~----~~~~~~~~~~~~~~~-----------------~~-~~~--~--~~~~~~~~~~~~~~~P~ 214 (289)
+.. ... .. ..............+ .. ... . ..+.... ...++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~i~~P~ 240 (298)
T 1q0r_A 162 LALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAA-ELREVTVPT 240 (298)
T ss_dssp HHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGG-GGGGCCSCE
T ss_pred HhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCcccccc-cccccCCCE
Confidence 000 000 00 000000000000000 00 000 0 0011111 023568999
Q ss_pred EEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHhhc
Q 022960 215 LTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 215 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
|+++|++|.++|++..+.+++.+|++++++++++|| +.++++++.|.+||++..
T Consensus 241 Lvi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH---e~p~~~~~~i~~fl~~~~ 294 (298)
T 1q0r_A 241 LVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGH---ALPSSVHGPLAEVILAHT 294 (298)
T ss_dssp EEEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCS---SCCGGGHHHHHHHHHHHH
T ss_pred EEEEeCCCccCCHHHHHHHHHhCCCCEEEEcCCCCC---CCcHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 567899999999998765
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=220.37 Aligned_cols=237 Identities=16% Similarity=0.167 Sum_probs=160.2
Q ss_pred eeEEeeCCCCceEEEEEeecCC-CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchHH
Q 022960 23 RRVVIPNSHGEKLVGILHETGS-KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYRR 99 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~~-~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~ 99 (289)
++..+.+.+|.++++..+++++ +++|||+||++++.. .|..+++.|++ ||+|+++|+||||.|+... ...++..
T Consensus 6 ~~~~~~~~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~--~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 82 (285)
T 3bwx_A 6 EDRYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNAR--DFEDLATRLAG-DWRVLCPEMRGRGDSDYAKDPMTYQPMQ 82 (285)
T ss_dssp EEEEEECTTSCEEEEEEECBCTTSCCEEEECCTTCCGG--GGHHHHHHHBB-TBCEEEECCTTBTTSCCCSSGGGCSHHH
T ss_pred ccCeeecCCCceEEEEEcCCCCCCCcEEEECCCCcchh--hHHHHHHHhhc-CCEEEeecCCCCCCCCCCCCccccCHHH
Confidence 4566777889999987776543 789999999999885 48999999987 7999999999999998653 3457788
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc-ccc---cc-----cch-----
Q 022960 100 EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG-IEG---RL-----GLG----- 164 (289)
Q Consensus 100 ~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-~~~---~~-----~~~----- 164 (289)
+++|+.++++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++....... ... .. ...
T Consensus 83 ~a~dl~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (285)
T 3bwx_A 83 YLQDLEALLAQE---GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAA 159 (285)
T ss_dssp HHHHHHHHHHHH---TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESSHHHHH
T ss_pred HHHHHHHHHHhc---CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCcccccHHHHH
Confidence 899999999988 77899999999999999999999999 9999998643221110 000 00 000
Q ss_pred -hHhhhhhcCccccc------------cc--ccccccccChhhhhhhhc--------cchhhhhccccc-CceEEEEEeC
Q 022960 165 -YLQRIKQNGFIDVR------------NK--KGKLEYRVTQESLMDRLS--------TDIHAACHMICQ-DCRVLTIHGT 220 (289)
Q Consensus 165 -~~~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~P~l~i~g~ 220 (289)
.........+.... .. .......... .+...+. .+..... ..+ ++|+|+++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~lii~G~ 236 (285)
T 3bwx_A 160 RALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDM-KIAEPFEAPVGATPQVDMWPLF--DALATRPLLVLRGE 236 (285)
T ss_dssp HHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCG-GGGCCTTSCTTCCCSSCCHHHH--HHHTTSCEEEEEET
T ss_pred HHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCH-HHHHHHhhhhhccccchhhHHH--HHccCCCeEEEEeC
Confidence 00000000000000 00 0000000000 0000000 0000001 123 7999999999
Q ss_pred CCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHh
Q 022960 221 KDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 221 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
+|.+++++..+.+.+. +++++++++++||+++.+.++....|.+||++
T Consensus 237 ~D~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~i~~fl~~ 284 (285)
T 3bwx_A 237 TSDILSAQTAAKMASR-PGVELVTLPRIGHAPTLDEPESIAAIGRLLER 284 (285)
T ss_dssp TCSSSCHHHHHHHHTS-TTEEEEEETTCCSCCCSCSHHHHHHHHHHHTT
T ss_pred CCCccCHHHHHHHHhC-CCcEEEEeCCCCccchhhCchHHHHHHHHHHh
Confidence 9999999999999999 99999999999999774443444689999864
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=220.80 Aligned_cols=226 Identities=19% Similarity=0.219 Sum_probs=155.2
Q ss_pred EEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHH
Q 022960 35 LVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDF 111 (289)
Q Consensus 35 l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l 111 (289)
++|...++. ++++|||+||++++... |..+++.|++. |+|+++|+||||.|+... ..++..+++|+.++++.+
T Consensus 3 l~y~~~G~~~~~~~~~vvllHG~~~~~~~--w~~~~~~L~~~-~~via~Dl~G~G~S~~~~-~~~~~~~a~dl~~~l~~l 78 (255)
T 3bf7_A 3 LNIRAQTAQNQHNNSPIVLVHGLFGSLDN--LGVLARDLVND-HNIIQVDVRNHGLSPREP-VMNYPAMAQDLVDTLDAL 78 (255)
T ss_dssp CCEEEECCSSCCCCCCEEEECCTTCCTTT--THHHHHHHTTT-SCEEEECCTTSTTSCCCS-CCCHHHHHHHHHHHHHHH
T ss_pred eeeeecCccccCCCCCEEEEcCCcccHhH--HHHHHHHHHhh-CcEEEecCCCCCCCCCCC-CcCHHHHHHHHHHHHHHc
Confidence 344444433 67899999999999864 89999999876 999999999999998654 467888999999999988
Q ss_pred HhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc-ccccccccccchhHhhhhhcCc----------ccccc
Q 022960 112 CAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN-LKRGIEGRLGLGYLQRIKQNGF----------IDVRN 179 (289)
Q Consensus 112 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 179 (289)
+.++++|+||||||.+|+.+|.++|+ |+++|++++... ............+ ........ .....
T Consensus 79 ---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
T 3bf7_A 79 ---QIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAI-NAVSESDAQTRQQAAAIMRQHLN 154 (255)
T ss_dssp ---TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHH-HHHHHSCCCSHHHHHHHHTTTCC
T ss_pred ---CCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHH-HhccccccccHHHHHHHHhhhcc
Confidence 77899999999999999999999999 999999875321 1100000000000 00000000 00000
Q ss_pred cc----------cccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCC
Q 022960 180 KK----------GKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGAD 249 (289)
Q Consensus 180 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g 249 (289)
.. ....+......+...+.. ........++++|+|+++|++|.+++++..+.+.+.++++++++++++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~g 233 (255)
T 3bf7_A 155 EEGVIQFLLKSFVDGEWRFNVPVLWDQYPH-IVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAG 233 (255)
T ss_dssp CHHHHHHHHTTEETTEESSCHHHHHHTHHH-HHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCTTEEECCBTTCC
T ss_pred hhHHHHHHHHhccCCceeecHHHHHhhhhh-ccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCCCCeEEEeCCCC
Confidence 00 000011111111111000 0000011256899999999999999999999999999999999999999
Q ss_pred cccc-cCchHHHHHHHHHHHh
Q 022960 250 HEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 250 H~~~-~~~~~~~~~i~~fl~~ 269 (289)
|+++ ++++++++.|.+||++
T Consensus 234 H~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 234 HWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp SCHHHHCHHHHHHHHHHHHHT
T ss_pred CccccCCHHHHHHHHHHHHhc
Confidence 9966 6788999999999975
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-34 Score=222.68 Aligned_cols=234 Identities=21% Similarity=0.229 Sum_probs=160.3
Q ss_pred CCC-ceEEEEEeecCCCcEEEEEcCCC---CCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHH
Q 022960 30 SHG-EKLVGILHETGSKQLVIVCHGFQ---STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDL 104 (289)
Q Consensus 30 ~~g-~~l~~~~~~~~~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~ 104 (289)
.+| .+++|...+.+++|+|||+||++ ++.. .|..+.+.|++. |+|+++|+||||.|+.+.. ..++..+++|+
T Consensus 20 ~~g~~~l~y~~~G~g~~~~vvllHG~~pg~~~~~--~w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl 96 (291)
T 2wue_A 20 VDGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWT--NFSRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQFNRYAAMAL 96 (291)
T ss_dssp SSSEEEEEEEEECTTCSSEEEEECCCCTTCCHHH--HTTTTHHHHTTT-SEEEEECCTTSTTSCCCSCCSSHHHHHHHHH
T ss_pred eCCcEEEEEEecCCCCCCcEEEECCCCCccchHH--HHHHHHHHHHhc-CEEEEECCCCCCCCCCCCCCCcCHHHHHHHH
Confidence 478 88887766655555999999997 4443 478888899876 9999999999999987654 56788999999
Q ss_pred HHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc----cccc---c-------hhHhhh
Q 022960 105 RAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE----GRLG---L-------GYLQRI 169 (289)
Q Consensus 105 ~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~----~~~~---~-------~~~~~~ 169 (289)
.++++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++......... .... . .....+
T Consensus 97 ~~~l~~l---~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (291)
T 2wue_A 97 KGLFDQL---GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAF 173 (291)
T ss_dssp HHHHHHH---TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHHHHHh---CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhccCCHHHHHHH
Confidence 9999988 78899999999999999999999999 999999998643211000 0000 0 000000
Q ss_pred hhcCcccccccccc---cccc--cChhhhhhhhc------c-chh-hh--hcccccCceEEEEEeCCCCccChhhHHHHH
Q 022960 170 KQNGFIDVRNKKGK---LEYR--VTQESLMDRLS------T-DIH-AA--CHMICQDCRVLTIHGTKDKMVPAEDALEFD 234 (289)
Q Consensus 170 ~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~------~-~~~-~~--~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 234 (289)
.............. ..+. .....+...+. . ... .. ....++++|+|+++|++|.++|++.++.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~ 253 (291)
T 2wue_A 174 LRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVAL 253 (291)
T ss_dssp HHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGGGGHHHH
T ss_pred HHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHHHHHHHH
Confidence 00000000000000 0000 00110100000 0 000 00 122356899999999999999999999999
Q ss_pred hhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 235 KFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 235 ~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+.+|++++++++++||+++ ++++++++.|.+||++
T Consensus 254 ~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 254 KTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp HHSTTEEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred HHCCCCeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9999999999999999965 6788999999999854
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=226.05 Aligned_cols=236 Identities=12% Similarity=0.137 Sum_probs=166.7
Q ss_pred CCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH
Q 022960 31 HGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 31 ~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 110 (289)
+|.++++...+ ++|+||++||++++... |..+++.|...||.|+++|+||||.|.......++.++++|+.++++.
T Consensus 17 ~g~~l~~~~~g--~~~~vv~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~~~~~~~ 92 (309)
T 3u1t_A 17 EGATIAYVDEG--SGQPVLFLHGNPTSSYL--WRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDHVAYMDGFIDA 92 (309)
T ss_dssp TTEEEEEEEEE--CSSEEEEECCTTCCGGG--GTTTHHHHHHTTCEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEcC--CCCEEEEECCCcchhhh--HHHHHHHHHhCCCEEEEEccCCCCCCCCCCcccCHHHHHHHHHHHHHH
Confidence 68888865554 47899999999998854 888999977789999999999999999877677889999999999999
Q ss_pred HHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc--ccc---chhHhhhhhc------------
Q 022960 111 FCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG--RLG---LGYLQRIKQN------------ 172 (289)
Q Consensus 111 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~--~~~---~~~~~~~~~~------------ 172 (289)
+ +.++++|+|||+||.+++.+|..+|+ |+++|++++.......... ... ..+...+...
T Consensus 93 ~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (309)
T 3u1t_A 93 L---GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEKMVLDGNF 169 (309)
T ss_dssp H---TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTSTTHHHHHHTTTCH
T ss_pred c---CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhccchhhhhccccce
Confidence 8 77799999999999999999999998 9999999976543210000 000 0000000000
Q ss_pred --------C-cccccccc------cccccccChhhhhhhh---------------ccchhhhhcccccCceEEEEEeCCC
Q 022960 173 --------G-FIDVRNKK------GKLEYRVTQESLMDRL---------------STDIHAACHMICQDCRVLTIHGTKD 222 (289)
Q Consensus 173 --------~-~~~~~~~~------~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~P~l~i~g~~D 222 (289)
. ........ ................ ..+..... .++++|+|+++|++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~l~i~G~~D 247 (309)
T 3u1t_A 170 FVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWL--MASPIPKLLFHAEPG 247 (309)
T ss_dssp HHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH--HHCCSCEEEEEEEEC
T ss_pred ehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhc--ccCCCCEEEEecCCC
Confidence 0 00000000 0000000000000000 00111111 245899999999999
Q ss_pred CccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcCCCC
Q 022960 223 KMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQKDG 275 (289)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~~~~ 275 (289)
.++|.+..+.+.+.+++.+++.++++||+++ ++++++.+.|.+||++...+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~~ 301 (309)
T 3u1t_A 248 ALAPKPVVDYLSENVPNLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKPHAS 301 (309)
T ss_dssp SSSCHHHHHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHCCCCC
T ss_pred CCCCHHHHHHHHhhCCCCEEEEecCCcccchhhCHHHHHHHHHHHHHhcchhhh
Confidence 9999999999999999999999999999965 6778999999999999876553
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-34 Score=223.17 Aligned_cols=229 Identities=17% Similarity=0.159 Sum_probs=156.2
Q ss_pred ceEEEEEeecCCCcEEEEEcCCC---CCCCCcchHHHH-HHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHH
Q 022960 33 EKLVGILHETGSKQLVIVCHGFQ---STKDRIPMVNLA-AALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAI 107 (289)
Q Consensus 33 ~~l~~~~~~~~~~~~iv~~hG~~---~~~~~~~~~~~~-~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~ 107 (289)
.+++|... |++++|||+||++ ++. ..|..+. +.|++. |+|+++|+||||.|+.+.. ..+++.+++|+.++
T Consensus 23 ~~l~y~~~--G~g~~vvllHG~~~~~~~~--~~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~ 97 (286)
T 2puj_A 23 FNIHYNEA--GNGETVIMLHGGGPGAGGW--SNYYRNVGPFVDAG-YRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 97 (286)
T ss_dssp EEEEEEEE--CCSSEEEEECCCSTTCCHH--HHHTTTHHHHHHTT-CEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHH
T ss_pred EEEEEEec--CCCCcEEEECCCCCCCCcH--HHHHHHHHHHHhcc-CEEEEECCCCCCCCCCCCCcCcCHHHHHHHHHHH
Confidence 77775544 4578999999997 444 3478888 889876 9999999999999987654 56788899999999
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc---ccccchh-----------Hhhhhhc
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE---GRLGLGY-----------LQRIKQN 172 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~---~~~~~~~-----------~~~~~~~ 172 (289)
++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++......... ....... ...+...
T Consensus 98 l~~l---~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (286)
T 2puj_A 98 MDAL---DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQV 174 (286)
T ss_dssp HHHT---TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred HHHh---CCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHH
Confidence 9988 78899999999999999999999999 999999998643211000 0000000 0000000
Q ss_pred Ccccccccc-c--ccccc---cChhhhhhhhc-------cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC
Q 022960 173 GFIDVRNKK-G--KLEYR---VTQESLMDRLS-------TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN 239 (289)
Q Consensus 173 ~~~~~~~~~-~--~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 239 (289)
......... . ...+. ........... ..........++++|+|+++|++|.++|++.++.+.+.+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~ 254 (286)
T 2puj_A 175 FLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDD 254 (286)
T ss_dssp HCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSS
T ss_pred HhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCCC
Confidence 000000000 0 00000 00000000000 00001111225689999999999999999999999999999
Q ss_pred cEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 240 HKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 240 ~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+++++++++||+.+ ++++++++.|.+||++
T Consensus 255 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 255 ARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 99999999999965 6788999999999974
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=218.31 Aligned_cols=220 Identities=18% Similarity=0.216 Sum_probs=149.4
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAII 122 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~ 122 (289)
+.+++||++||++++... |..+++.|+++||+|+++|+||||.|.......++..+++|+.++++.+...+.++++|+
T Consensus 14 ~~~~~vvllHG~~~~~~~--~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~lv 91 (247)
T 1tqh_A 14 AGERAVLLLHGFTGNSAD--VRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVA 91 (247)
T ss_dssp CSSCEEEEECCTTCCTHH--HHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCCcEEEEECCCCCChHH--HHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 456889999999998854 899999999889999999999999775433334667777888887777766678899999
Q ss_pred EeChhHHHHHHHHHhCCCccEEEEeccCCcccc--cccccccchhHhhhhh-cCcc-----cccccccccccccChhhhh
Q 022960 123 GHSKGGNAVLLYASKYNDISIVINISGRFNLKR--GIEGRLGLGYLQRIKQ-NGFI-----DVRNKKGKLEYRVTQESLM 194 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~ 194 (289)
||||||.+|+.+|.++| |+++|+++++..... ...... ..+...+.. .... ......... .......+.
T Consensus 92 G~SmGG~ia~~~a~~~p-v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 168 (247)
T 1tqh_A 92 GLSLGGVFSLKLGYTVP-IEGIVTMCAPMYIKSEETMYEGV-LEYAREYKKREGKSEEQIEQEMEKFKQT-PMKTLKALQ 168 (247)
T ss_dssp EETHHHHHHHHHHTTSC-CSCEEEESCCSSCCCHHHHHHHH-HHHHHHHHHHHTCCHHHHHHHHHHHTTS-CCTTHHHHH
T ss_pred EeCHHHHHHHHHHHhCC-CCeEEEEcceeecCcchhhhHHH-HHHHHHhhcccccchHHHHhhhhcccCC-CHHHHHHHH
Confidence 99999999999999999 999998776543211 000000 000000000 0000 000000000 000000011
Q ss_pred hhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC--cEEEEEcCCCcccc-cC-chHHHHHHHHHHHhh
Q 022960 195 DRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN--HKLHIIEGADHEFT-SH-QDELASLVIQFIKAN 270 (289)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~-~~-~~~~~~~i~~fl~~~ 270 (289)
. +..+..... .++++|+|+++|++|.++|++.++.+++.+++ +++++++++||.++ ++ ++++++.|.+||++.
T Consensus 169 ~-~~~~~~~~l--~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 169 E-LIADVRDHL--DLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 245 (247)
T ss_dssp H-HHHHHHHTG--GGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred H-HHHHHHhhc--ccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCccHHHHHHHHHHHHHhc
Confidence 0 001111122 24689999999999999999999999999986 69999999999976 44 578999999999863
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=227.10 Aligned_cols=236 Identities=13% Similarity=0.135 Sum_probs=161.9
Q ss_pred CCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH
Q 022960 31 HGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 31 ~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 110 (289)
+|.+++|...+++++|+|||+||++++... |..+.+.|++. |+|+++|+||||.|+.+...++++.+++|+.++++.
T Consensus 15 ~g~~l~y~~~G~g~~~pvvllHG~~~~~~~--w~~~~~~L~~~-~~via~Dl~G~G~S~~~~~~~~~~~~a~dl~~ll~~ 91 (316)
T 3afi_E 15 LGSSMAYRETGAQDAPVVLFLHGNPTSSHI--WRNILPLVSPV-AHCIAPDLIGFGQSGKPDIAYRFFDHVRYLDAFIEQ 91 (316)
T ss_dssp TTEEEEEEEESCTTSCEEEEECCTTCCGGG--GTTTHHHHTTT-SEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCeEEEECCCCCchHH--HHHHHHHHhhC-CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 677888766555444499999999999854 89999999875 999999999999998765567889999999999998
Q ss_pred HHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcc--ccccc-----c-----cccchhHhhhh-------
Q 022960 111 FCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNL--KRGIE-----G-----RLGLGYLQRIK------- 170 (289)
Q Consensus 111 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~--~~~~~-----~-----~~~~~~~~~~~------- 170 (289)
+ +.++++|+||||||.+|+.+|.++|+ |+++|++++.... ..... . .........+.
T Consensus 92 l---~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (316)
T 3afi_E 92 R---GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEA 168 (316)
T ss_dssp T---TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTSTTHHHH
T ss_pred c---CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhcCCchhhH
Confidence 8 78899999999999999999999999 9999999873211 00000 0 00000000000
Q ss_pred ---------hcCccc-ccccccc-----c--cc--ccChhhhhhhhccc--------hhhh-----hcccccCceEEEEE
Q 022960 171 ---------QNGFID-VRNKKGK-----L--EY--RVTQESLMDRLSTD--------IHAA-----CHMICQDCRVLTIH 218 (289)
Q Consensus 171 ---------~~~~~~-~~~~~~~-----~--~~--~~~~~~~~~~~~~~--------~~~~-----~~~~~~~~P~l~i~ 218 (289)
...+.. ....... . .+ .............. .... ....++++|+|+|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~ 248 (316)
T 3afi_E 169 MILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFT 248 (316)
T ss_dssp HHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred HHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhccCCCeEEEe
Confidence 000000 0000000 0 00 00000000000000 0000 00114689999999
Q ss_pred eCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcC
Q 022960 219 GTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 219 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~ 272 (289)
|++|.++|++..+.+.+.+|++++++++++||+++ ++++++++.|.+||++...
T Consensus 249 G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~~~ 303 (316)
T 3afi_E 249 GEPGALVSPEFAERFAASLTRCALIRLGAGLHYLQEDHADAIGRSVAGWIAGIEA 303 (316)
T ss_dssp EEECSSSCHHHHHHHHHHSSSEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccCHHHHHHHHHhCCCCeEEEcCCCCCCchhhCHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999976 6678999999999987643
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=222.08 Aligned_cols=229 Identities=16% Similarity=0.125 Sum_probs=156.1
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-----ccchHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-----YGNYRREAEDL 104 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~d~ 104 (289)
.+|.+++|...+ ++|+|||+||++++.. .|..+++.|+++ |+|+++|+||||.|+.+ . .+++..+++|+
T Consensus 16 ~~g~~l~y~~~G--~g~~lvllHG~~~~~~--~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~~~~~~~~~~~~~a~dl 89 (294)
T 1ehy_A 16 LPDVKIHYVREG--AGPTLLLLHGWPGFWW--EWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-DLNDLSKYSLDKAADDQ 89 (294)
T ss_dssp CSSCEEEEEEEE--CSSEEEEECCSSCCGG--GGHHHHHHHHTT-SEEEEECCTTSTTSCCC-CTTCGGGGCHHHHHHHH
T ss_pred ECCEEEEEEEcC--CCCEEEEECCCCcchh--hHHHHHHHHhhc-CEEEecCCCCCCCCCCC-ccccccCcCHHHHHHHH
Confidence 478888865544 6789999999999885 499999999887 99999999999999876 4 46788999999
Q ss_pred HHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc-ccccccc-------c---cc-chhHhhhhh
Q 022960 105 RAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN-LKRGIEG-------R---LG-LGYLQRIKQ 171 (289)
Q Consensus 105 ~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~-~~~~~~~-------~---~~-~~~~~~~~~ 171 (289)
.++++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++... ....... + .. ......+..
T Consensus 90 ~~ll~~l---~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (294)
T 1ehy_A 90 AALLDAL---GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVG 166 (294)
T ss_dssp HHHHHHT---TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHHHHHHT
T ss_pred HHHHHHc---CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcchhHHHhc
Confidence 9999988 78899999999999999999999999 999999996432 1110000 0 00 000000000
Q ss_pred cCc------cc-ccccccccccccChh---hhhhhh----------------ccchhhhh---cccccCceEEEEEeCCC
Q 022960 172 NGF------ID-VRNKKGKLEYRVTQE---SLMDRL----------------STDIHAAC---HMICQDCRVLTIHGTKD 222 (289)
Q Consensus 172 ~~~------~~-~~~~~~~~~~~~~~~---~~~~~~----------------~~~~~~~~---~~~~~~~P~l~i~g~~D 222 (289)
... .. ..............+ .+...+ ........ ...++++|+|+++|++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D 246 (294)
T 1ehy_A 167 SSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGD 246 (294)
T ss_dssp SCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCS
T ss_pred cchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEEEEEeCCC
Confidence 000 00 000000000000000 000000 00000000 11156899999999999
Q ss_pred CccCh-hhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHH
Q 022960 223 KMVPA-EDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFI 267 (289)
Q Consensus 223 ~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl 267 (289)
.++|. +..+.+.+.++++++++++++||+++ ++++++++.|.+||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 247 TCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp SCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred CCcchHHHHHHHHHHcCCCceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 99884 67788888899999999999999966 67788999999997
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-34 Score=217.91 Aligned_cols=231 Identities=18% Similarity=0.227 Sum_probs=152.7
Q ss_pred CCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccc---hHHHHHHHHHH
Q 022960 31 HGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN---YRREAEDLRAI 107 (289)
Q Consensus 31 ~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~---~~~~~~d~~~~ 107 (289)
+|.++++...+++ .++||++||++++.. ..|..+++.|.++||+|+++|+||||.|.......+ +.+.++|+.++
T Consensus 10 ~g~~l~~~~~g~~-~~~vvllHG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~ 87 (254)
T 2ocg_A 10 NGVQLHYQQTGEG-DHAVLLLPGMLGSGE-TDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDL 87 (254)
T ss_dssp TTEEEEEEEEECC-SEEEEEECCTTCCHH-HHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCCCTTHHHHHHHHHHHH
T ss_pred CCEEEEEEEecCC-CCeEEEECCCCCCCc-cchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 6778887665543 468999999988722 247889999998899999999999999986543334 45556666666
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc---cc--chhHhhhhhcCcccccccc
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR---LG--LGYLQRIKQNGFIDVRNKK 181 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~ 181 (289)
++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++........... .. ..+...... .........
T Consensus 88 l~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 163 (254)
T 2ocg_A 88 MKAL---KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRK-PLEALYGYD 163 (254)
T ss_dssp HHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHHH-HHHHHHCHH
T ss_pred HHHh---CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhHH-HHHHHhcch
Confidence 6655 77899999999999999999999999 99999998754322110000 00 000000000 000000000
Q ss_pred -cccccccChhhhhhhhcc-ch-hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCch
Q 022960 182 -GKLEYRVTQESLMDRLST-DI-HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQD 257 (289)
Q Consensus 182 -~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~ 257 (289)
....+......+...... .. .......++++|+|+++|++|.++|.+.++.+.+.++++++++++++||.++ ++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 243 (254)
T 2ocg_A 164 YFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFAD 243 (254)
T ss_dssp HHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTTCEEEEETTCCTTHHHHTHH
T ss_pred hhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCCCEEEEcCCCCCchhhhCHH
Confidence 000000000000000000 00 0011122568999999999999999999999999999999999999999965 6788
Q ss_pred HHHHHHHHHH
Q 022960 258 ELASLVIQFI 267 (289)
Q Consensus 258 ~~~~~i~~fl 267 (289)
++++.|.+||
T Consensus 244 ~~~~~i~~fl 253 (254)
T 2ocg_A 244 EFNKLAEDFL 253 (254)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999998
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-34 Score=221.68 Aligned_cols=234 Identities=17% Similarity=0.194 Sum_probs=157.9
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCc-chHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRI-PMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAI 107 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~ 107 (289)
.+|.+++|... |++++|||+||++.+...+ .|..+.+.|+ .+|+|+++|+||||.|+.+.. ..+++.+++|+.++
T Consensus 12 ~~g~~l~y~~~--G~g~~vvllHG~~~~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~ 88 (282)
T 1iup_A 12 AAGVLTNYHDV--GEGQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGI 88 (282)
T ss_dssp ETTEEEEEEEE--CCSSEEEEECCCCTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCTTCCCCHHHHHHHHHHH
T ss_pred ECCEEEEEEec--CCCCeEEEECCCCCCccHHHHHHHHHHhhc-cCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 46778876544 4678999999998665421 4677778884 479999999999999987653 46788999999999
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc---ccccc----cchhHhhhhhcCcccccc
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG---IEGRL----GLGYLQRIKQNGFIDVRN 179 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~ 179 (289)
++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++....... ..... .......+..........
T Consensus 89 l~~l---~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (282)
T 1iup_A 89 MDAL---EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSL 165 (282)
T ss_dssp HHHT---TCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHCSSGGG
T ss_pred HHHh---CCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHHHHHHHHHHhhcCccc
Confidence 9988 78899999999999999999999999 9999999876432110 00000 000000000000000000
Q ss_pred ccc---cccc--ccCh---hhhhhhhcc---chhh-----hhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEE
Q 022960 180 KKG---KLEY--RVTQ---ESLMDRLST---DIHA-----ACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLH 243 (289)
Q Consensus 180 ~~~---~~~~--~~~~---~~~~~~~~~---~~~~-----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 243 (289)
... ...+ .... ..+...... .... .....++++|+|+++|++|.++|++.++.+.+.+++++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~ 245 (282)
T 1iup_A 166 VTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLH 245 (282)
T ss_dssp CCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEE
T ss_pred CCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhCCCCeEE
Confidence 000 0000 0000 000000000 0000 0122356899999999999999999999999999999999
Q ss_pred EEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 244 IIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 244 ~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+++++||+++ ++++++++.|.+||++
T Consensus 246 ~i~~~gH~~~~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 246 VFGRCGHWTQIEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp EESSCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred EECCCCCCccccCHHHHHHHHHHHHhc
Confidence 9999999965 6788999999999986
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=215.67 Aligned_cols=231 Identities=20% Similarity=0.210 Sum_probs=162.1
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~ 105 (289)
++...+|.++++...+ ++|+||++||++++... |..+.+.|+ .||+|+++|+||||.|.... ..++.++++|+.
T Consensus 6 ~~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~--~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~-~~~~~~~~~~~~ 79 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSG--SGPPVVLVGGALSTRAG--GAPLAERLA-PHFTVICYDRRGRGDSGDTP-PYAVEREIEDLA 79 (262)
T ss_dssp EEECTTSCEEEEEEEE--CSSEEEEECCTTCCGGG--GHHHHHHHT-TTSEEEEECCTTSTTCCCCS-SCCHHHHHHHHH
T ss_pred eEEcCCCcEEEEEEcC--CCCcEEEECCCCcChHH--HHHHHHHHh-cCcEEEEEecCCCcCCCCCC-CCCHHHHHHHHH
Confidence 4566789999866554 57899999999999854 899999998 78999999999999998775 567889999999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCccccccccc---ccchhHhhhhhcCccccccccc
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGR---LGLGYLQRIKQNGFIDVRNKKG 182 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 182 (289)
++++.+ + ++++++|||+||.+++.+|.++|.|+++|++++........... ....+...+.............
T Consensus 80 ~~~~~l---~-~~~~l~G~S~Gg~ia~~~a~~~p~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (262)
T 3r0v_A 80 AIIDAA---G-GAAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFM 155 (262)
T ss_dssp HHHHHT---T-SCEEEEEETHHHHHHHHHHHTTCCEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhc---C-CCeEEEEEcHHHHHHHHHHHhCCCcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhhHHHHHh
Confidence 999988 5 78999999999999999999999999999999876543222110 0000000000000000000000
Q ss_pred ccccccChh---------------hhhhhhc-------cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc
Q 022960 183 KLEYRVTQE---------------SLMDRLS-------TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH 240 (289)
Q Consensus 183 ~~~~~~~~~---------------~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 240 (289)
......... .....+. ..........++++|+|+++|++|.++|++..+.+.+.++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 235 (262)
T 3r0v_A 156 TEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELADTIPNA 235 (262)
T ss_dssp HHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHHHSTTE
T ss_pred hcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHHhCCCC
Confidence 000000000 0000000 000001111245899999999999999999999999999999
Q ss_pred EEEEEcCCCcccccCchHHHHHHHHHHH
Q 022960 241 KLHIIEGADHEFTSHQDELASLVIQFIK 268 (289)
Q Consensus 241 ~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 268 (289)
++++++++|| +++++++.+.|.+||+
T Consensus 236 ~~~~~~~~gH--~~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 236 RYVTLENQTH--TVAPDAIAPVLVEFFT 261 (262)
T ss_dssp EEEECCCSSS--SCCHHHHHHHHHHHHC
T ss_pred eEEEecCCCc--ccCHHHHHHHHHHHHh
Confidence 9999999999 4678899999999985
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=217.31 Aligned_cols=231 Identities=20% Similarity=0.303 Sum_probs=159.6
Q ss_pred CCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHH
Q 022960 29 NSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV 108 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 108 (289)
..+|.++++..+ +++++|||+||++++... |..+++.|+++||+|+++|+||||.|+......+++.+++|+.+++
T Consensus 9 ~~~g~~l~y~~~--g~~~pvvllHG~~~~~~~--~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l 84 (279)
T 1hkh_A 9 NSTPIELYYEDQ--GSGQPVVLIHGYPLDGHS--WERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVL 84 (279)
T ss_dssp TTEEEEEEEEEE--SSSEEEEEECCTTCCGGG--GHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred CCCCeEEEEEec--CCCCcEEEEcCCCchhhH--HhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 346777775544 456789999999998854 9999999999999999999999999987766678889999999999
Q ss_pred HHHHhcCCceEEEEEeChhHHHHHHHHHhCCC--ccEEEEeccCCccccccc---ccccchhH----hhhhhcC---c--
Q 022960 109 QDFCAKGRVITAIIGHSKGGNAVLLYASKYND--ISIVINISGRFNLKRGIE---GRLGLGYL----QRIKQNG---F-- 174 (289)
Q Consensus 109 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~---~-- 174 (289)
+.+ +.++++|+||||||.+++.+|.++|+ |+++|++++......... ........ ....... +
T Consensus 85 ~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (279)
T 1hkh_A 85 ETL---DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTD 161 (279)
T ss_dssp HHH---TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHH
T ss_pred Hhc---CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHH
Confidence 998 77899999999999999999999985 999999987432110000 00000000 0000000 0
Q ss_pred --ccccccccccccccChhhhh---------------h---hhccchhhhhccccc---CceEEEEEeCCCCccChhhH-
Q 022960 175 --IDVRNKKGKLEYRVTQESLM---------------D---RLSTDIHAACHMICQ---DCRVLTIHGTKDKMVPAEDA- 230 (289)
Q Consensus 175 --~~~~~~~~~~~~~~~~~~~~---------------~---~~~~~~~~~~~~~~~---~~P~l~i~g~~D~~~~~~~~- 230 (289)
.................... . .+..+... ...++ ++|+|+++|++|.++|++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~~~~P~lii~G~~D~~~~~~~~~ 239 (279)
T 1hkh_A 162 FYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRS--DVEAVRAAGKPTLILHGTKDNILPIDATA 239 (279)
T ss_dssp HHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHH--HHHHHHHHCCCEEEEEETTCSSSCTTTTH
T ss_pred HHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhh--hHHHhccCCCCEEEEEcCCCccCChHHHH
Confidence 00000000000000000000 0 00011111 11245 89999999999999999887
Q ss_pred HHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 231 LEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
+.+.+.++++++++++++||+++ ++++++++.|.+||+
T Consensus 240 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 240 RRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFLA 278 (279)
T ss_dssp HHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHhCCCeeEEEeCCCCccchhcCHHHHHHHHHHHhh
Confidence 89999999999999999999965 778899999999986
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=222.78 Aligned_cols=234 Identities=15% Similarity=0.114 Sum_probs=162.4
Q ss_pred eCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHH
Q 022960 28 PNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI 107 (289)
Q Consensus 28 ~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~ 107 (289)
...+|.++++...+ ++|+|||+||++++... |..+++.|+++ |+|+++|+||||.|.......++.++++|+.++
T Consensus 15 ~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~--~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~ 89 (301)
T 3kda_A 15 REVDGVKLHYVKGG--QGPLVMLVHGFGQTWYE--WHQLMPELAKR-FTVIAPDLPGLGQSEPPKTGYSGEQVAVYLHKL 89 (301)
T ss_dssp EEETTEEEEEEEEE--SSSEEEEECCTTCCGGG--GTTTHHHHTTT-SEEEEECCTTSTTCCCCSSCSSHHHHHHHHHHH
T ss_pred EeeCCeEEEEEEcC--CCCEEEEECCCCcchhH--HHHHHHHHHhc-CeEEEEcCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence 33478888866555 77899999999999854 89999999988 999999999999998876677889999999999
Q ss_pred HHHHHhcCCce-EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc------cc-----------chhHhh
Q 022960 108 VQDFCAKGRVI-TAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR------LG-----------LGYLQR 168 (289)
Q Consensus 108 i~~l~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~------~~-----------~~~~~~ 168 (289)
++.+ +.++ ++|+||||||.+++.+|.++|+ |+++|++++........... .. ......
T Consensus 90 l~~l---~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (301)
T 3kda_A 90 ARQF---SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAET 166 (301)
T ss_dssp HHHH---CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTTHHHH
T ss_pred HHHc---CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCcchHHH
Confidence 9998 7777 9999999999999999999999 99999999864321111000 00 000000
Q ss_pred hhhcCc----ccccccccccccccChhh---hh-------------hhhcc-------chhhhhcccccCceEEEEEeCC
Q 022960 169 IKQNGF----IDVRNKKGKLEYRVTQES---LM-------------DRLST-------DIHAACHMICQDCRVLTIHGTK 221 (289)
Q Consensus 169 ~~~~~~----~~~~~~~~~~~~~~~~~~---~~-------------~~~~~-------~~~~~~~~~~~~~P~l~i~g~~ 221 (289)
+..... .................. +. ..+.. .........++++|+|+++|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~ 246 (301)
T 3kda_A 167 LIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMTLAGGGAG 246 (301)
T ss_dssp HHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCEEEEEECSTT
T ss_pred HhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccccCcceEEEecCC
Confidence 000000 000000000000000000 00 00000 0000011115699999999999
Q ss_pred CCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 222 DKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 222 D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
| ++....+.+.+.++++++++++++||+++ ++++++++.|.+|+++.-
T Consensus 247 D--~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~ 295 (301)
T 3kda_A 247 G--MGTFQLEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGR 295 (301)
T ss_dssp S--CTTHHHHHHHTTBSSEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSC
T ss_pred C--CChhHHHHHHhhcccCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCc
Confidence 9 77888889999999999999999999965 778999999999998754
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=218.96 Aligned_cols=223 Identities=19% Similarity=0.246 Sum_probs=154.4
Q ss_pred EeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHHHHHHHhcCCc
Q 022960 39 LHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAIVQDFCAKGRV 117 (289)
Q Consensus 39 ~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~~l~~~~~~ 117 (289)
|...|++++|||+||++++... |..+++.|++. |+|+++|+||||.|..... ..++..+++|+.++++.+ +.+
T Consensus 10 y~~~G~g~~vvllHG~~~~~~~--~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~l---~~~ 83 (269)
T 2xmz_A 10 EANVETNQVLVFLHGFLSDSRT--YHNHIEKFTDN-YHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKY---KDK 83 (269)
T ss_dssp CCSSCCSEEEEEECCTTCCGGG--GTTTHHHHHTT-SEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGGG---TTS
T ss_pred EEEcCCCCeEEEEcCCCCcHHH--HHHHHHHHhhc-CeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHc---CCC
Confidence 4456677789999999999854 88899999876 9999999999999987654 568899999999999887 778
Q ss_pred eEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc---c-cchhHhhhhhcCccc----c-----ccc---
Q 022960 118 ITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR---L-GLGYLQRIKQNGFID----V-----RNK--- 180 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~----~-----~~~--- 180 (289)
+++|+||||||.+|+.+|.++|+ |+++|++++........... . ...+...+....+.. + ...
T Consensus 84 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (269)
T 2xmz_A 84 SITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLE 163 (269)
T ss_dssp EEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTSGGGGGGGG
T ss_pred cEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhCcccccccc
Confidence 99999999999999999999998 99999999765432111000 0 000000000000000 0 000
Q ss_pred -ccc---cc----cccChhhhhhhh-------ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEE
Q 022960 181 -KGK---LE----YRVTQESLMDRL-------STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHII 245 (289)
Q Consensus 181 -~~~---~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (289)
... .. .......+...+ ..+... ...++++|+|+++|++|.++|.+..+ +.+.+++++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~~~~~~~i 240 (269)
T 2xmz_A 164 LPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWP--RLKEIKVPTLILAGEYDEKFVQIAKK-MANLIPNSKCKLI 240 (269)
T ss_dssp SCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGG--GGGGCCSCEEEEEETTCHHHHHHHHH-HHHHSTTEEEEEE
T ss_pred CCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHH--HHHhcCCCEEEEEeCCCcccCHHHHH-HHhhCCCcEEEEe
Confidence 000 00 000000000000 001111 12246899999999999999887765 8889999999999
Q ss_pred cCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 246 EGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 246 ~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
+++||+++ ++++++++.|.+||++.
T Consensus 241 ~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 241 SATGHTIHVEDSDEFDTMILGFLKEE 266 (269)
T ss_dssp TTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCCChhhcCHHHHHHHHHHHHHHh
Confidence 99999965 67789999999999864
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=213.96 Aligned_cols=238 Identities=18% Similarity=0.205 Sum_probs=166.5
Q ss_pred eCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHH
Q 022960 28 PNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI 107 (289)
Q Consensus 28 ~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~ 107 (289)
...+|..+++ ..+++|+||++||++++... |..+++.|+++||.|+++|+||+|.|.......++..+++|+.++
T Consensus 26 ~~~~g~~~~~---~~g~~~~vv~~HG~~~~~~~--~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~ 100 (270)
T 3rm3_A 26 PVLSGAEPFY---AENGPVGVLLVHGFTGTPHS--MRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEG 100 (270)
T ss_dssp CCCTTCCCEE---ECCSSEEEEEECCTTCCGGG--THHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHHHHHHHHH
T ss_pred cCCCCCcccc---cCCCCeEEEEECCCCCChhH--HHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHHHHHHHHH
Confidence 3446766653 25678999999999998854 899999999999999999999999998665566888999999999
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccc-ccccc
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKK-GKLEY 186 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 186 (289)
++++... .++++|+|||+||.+++.++..+|+|+++|+++++..................+............ ....+
T Consensus 101 i~~l~~~-~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (270)
T 3rm3_A 101 YGWLKQR-CQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAY 179 (270)
T ss_dssp HHHHHTT-CSEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCC
T ss_pred HHHHHhh-CCcEEEEEEcHhHHHHHHHHHhCCCccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcc
Confidence 9999654 779999999999999999999999999999999976553322111110000000000000000000 00001
Q ss_pred -ccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc--EEEEEcCCCcccccC-c-hHHHH
Q 022960 187 -RVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH--KLHIIEGADHEFTSH-Q-DELAS 261 (289)
Q Consensus 187 -~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~-~-~~~~~ 261 (289)
......+...............++++|+|+++|++|.++|++.++.+.+.+++. ++++++++||.++.+ + +++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 259 (270)
T 3rm3_A 180 EKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIE 259 (270)
T ss_dssp SEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHH
T ss_pred cccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHH
Confidence 111111111111100111112245899999999999999999999999999876 999999999997644 4 78999
Q ss_pred HHHHHHHhhc
Q 022960 262 LVIQFIKANY 271 (289)
Q Consensus 262 ~i~~fl~~~~ 271 (289)
.|.+||+++.
T Consensus 260 ~i~~fl~~~~ 269 (270)
T 3rm3_A 260 RSLEFFAKHA 269 (270)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999998763
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=217.91 Aligned_cols=244 Identities=14% Similarity=0.114 Sum_probs=165.9
Q ss_pred cccceeeEEeeCCCCceEEEEEe--ec--CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILH--ET--GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL 93 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~--~~--~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 93 (289)
.....+.+.+.. +|..+...++ .+ +++|+||++||++++... |..+++.|.++||+|+++|+||||.|.....
T Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~vv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 92 (315)
T 4f0j_A 16 YAYPVHYLDFTS-QGQPLSMAYLDVAPKKANGRTILLMHGKNFCAGT--WERTIDVLADAGYRVIAVDQVGFCKSSKPAH 92 (315)
T ss_dssp CSSCCEEEEEEE-TTEEEEEEEEEECCSSCCSCEEEEECCTTCCGGG--GHHHHHHHHHTTCEEEEECCTTSTTSCCCSS
T ss_pred cCccceeEEEec-CCCCeeEEEeecCCCCCCCCeEEEEcCCCCcchH--HHHHHHHHHHCCCeEEEeecCCCCCCCCCCc
Confidence 344556666654 4545544443 33 478999999999998854 9999999999999999999999999987664
Q ss_pred -ccchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc---ccchhHhh
Q 022960 94 -YGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR---LGLGYLQR 168 (289)
Q Consensus 94 -~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~---~~~~~~~~ 168 (289)
..++.+.++|+.++++.+ +.++++|+|||+||.+++.++.++|+ |+++|++++........... ....+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (315)
T 4f0j_A 93 YQYSFQQLAANTHALLERL---GVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRR 169 (315)
T ss_dssp CCCCHHHHHHHHHHHHHHT---TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHh---CCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhh
Confidence 667888899999999887 77799999999999999999999998 99999999854321110000 00000000
Q ss_pred hhhcCcc--------cccccccccccccChh--------------------hhhhhhccchhhhhcccccCceEEEEEeC
Q 022960 169 IKQNGFI--------DVRNKKGKLEYRVTQE--------------------SLMDRLSTDIHAACHMICQDCRVLTIHGT 220 (289)
Q Consensus 169 ~~~~~~~--------~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 220 (289)
....... ................ ........+.... ..++++|+|+++|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~P~lii~G~ 247 (315)
T 4f0j_A 170 DLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYE--LDRLQMPTLLLIGE 247 (315)
T ss_dssp HTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGG--GGGCCSCEEEEEET
T ss_pred cccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhh--cccCCCCeEEEEec
Confidence 0000000 0000000000000000 0000000111111 22458999999999
Q ss_pred CCCccC----------------hhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 221 KDKMVP----------------AEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 221 ~D~~~~----------------~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+|.++| .+..+.+.+.++++++++++++||+++ ++++++++.|.+||++
T Consensus 248 ~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 248 KDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGLQT 313 (315)
T ss_dssp TCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHHHHHCC
T ss_pred CCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhhhCHHHHHHHHHHHhcc
Confidence 999999 778889999999999999999999965 6778899999999965
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=219.42 Aligned_cols=235 Identities=15% Similarity=0.142 Sum_probs=164.1
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHH-cCccEEEEccccCCCCCCCccccchHHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALER-EGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV 108 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 108 (289)
.+|.++++.. .+++|+||++||++++.. .|..+.+.|.+ .||+|+++|+||||.|..... .++.++++|+.+++
T Consensus 8 ~~g~~l~y~~--~g~~~~vv~lhG~~~~~~--~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~l 82 (272)
T 3fsg_A 8 LTRSNISYFS--IGSGTPIIFLHGLSLDKQ--STCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP-STSDNVLETLIEAI 82 (272)
T ss_dssp ECTTCCEEEE--ECCSSEEEEECCTTCCHH--HHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS-CSHHHHHHHHHHHH
T ss_pred ecCCeEEEEE--cCCCCeEEEEeCCCCcHH--HHHHHHHHHhccCceEEEEecCCCCCCCCCCCC-CCHHHHHHHHHHHH
Confidence 3677788554 447889999999999885 48888888887 699999999999999988776 78899999999999
Q ss_pred HH-HHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccc--------------cchhHhhhhhc
Q 022960 109 QD-FCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRL--------------GLGYLQRIKQN 172 (289)
Q Consensus 109 ~~-l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 172 (289)
+. + +.++++|+|||+||.+|+.+|.++|+ |+++|+++|............ .......+...
T Consensus 83 ~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (272)
T 3fsg_A 83 EEII---GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSM 159 (272)
T ss_dssp HHHH---TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHH
T ss_pred HHHh---CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHH
Confidence 98 5 66789999999999999999999998 999999998753321111000 00000000000
Q ss_pred Ccccccccc------cccccccChhhhhhhh----ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEE
Q 022960 173 GFIDVRNKK------GKLEYRVTQESLMDRL----STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKL 242 (289)
Q Consensus 173 ~~~~~~~~~------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 242 (289)
......... ...........+...+ ..+........++++|+|+++|++|.++|++..+.+.+.++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 239 (272)
T 3fsg_A 160 NVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNENGEI 239 (272)
T ss_dssp CSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCTTEEE
T ss_pred hccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcCCCeE
Confidence 000000000 0000000000000000 111111112235699999999999999999999999999999999
Q ss_pred EEEcCCCcccc-cCchHHHHHHHHHHHhhcC
Q 022960 243 HIIEGADHEFT-SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 243 ~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~ 272 (289)
++++++||+++ ++++++.+.|.+||++...
T Consensus 240 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 240 VLLNRTGHNLMIDQREAVGFHFDLFLDELNS 270 (272)
T ss_dssp EEESSCCSSHHHHTHHHHHHHHHHHHHHHHC
T ss_pred EEecCCCCCchhcCHHHHHHHHHHHHHHhhc
Confidence 99999999965 6778999999999987653
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=214.19 Aligned_cols=227 Identities=14% Similarity=0.124 Sum_probs=160.9
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYRREAEDLRAI 107 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~~~ 107 (289)
.+|.++++..++++++|+||++||++++... |..+++.|.++||.|+++|+||+|.|.... ...++.++++|+.++
T Consensus 11 ~~g~~l~~~~~g~~~~~~vv~~hG~~~~~~~--~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 88 (286)
T 3qit_A 11 FGGNQICLCSWGSPEHPVVLCIHGILEQGLA--WQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRV 88 (286)
T ss_dssp ETTEEEEEEEESCTTSCEEEEECCTTCCGGG--GHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSHHHHHHHHHHH
T ss_pred cCCceEEEeecCCCCCCEEEEECCCCcccch--HHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 4788999988888889999999999999854 899999999999999999999999998776 566778889999999
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhh---hhcCc---------
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRI---KQNGF--------- 174 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------- 174 (289)
++.+ +.++++++|||+||.+++.+|.++|+ |+++|++++...............+...+ .....
T Consensus 89 ~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (286)
T 3qit_A 89 IQEL---PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVAT 165 (286)
T ss_dssp HHHS---CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCCCCCCCBSSHHH
T ss_pred HHhc---CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhccccccccccHHH
Confidence 9887 77899999999999999999999998 99999999876543322111100000000 00000
Q ss_pred ---------ccc------------c-ccccccccccChhh----hhhh-----hccchhhhhcccccCceEEEEEeCCCC
Q 022960 175 ---------IDV------------R-NKKGKLEYRVTQES----LMDR-----LSTDIHAACHMICQDCRVLTIHGTKDK 223 (289)
Q Consensus 175 ---------~~~------------~-~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~P~l~i~g~~D~ 223 (289)
... . .......+...... .... ...+..... .++++|+++++|++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~ 243 (286)
T 3qit_A 166 AASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEML--KSIQVPTTLVYGDSSK 243 (286)
T ss_dssp HHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHH--HHCCSCEEEEEETTCC
T ss_pred HHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHH--hccCCCeEEEEeCCCc
Confidence 000 0 00000000000000 0000 011111111 2458999999999999
Q ss_pred ccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHH
Q 022960 224 MVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVI 264 (289)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 264 (289)
++|.+..+.+.+.+++++++++++ ||+++ ++++++++.|.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~ 284 (286)
T 3qit_A 244 LNRPEDLQQQKMTMTQAKRVFLSG-GHNLHIDAAAALASLIL 284 (286)
T ss_dssp SSCHHHHHHHHHHSTTSEEEEESS-SSCHHHHTHHHHHHHHH
T ss_pred ccCHHHHHHHHHHCCCCeEEEeeC-CchHhhhChHHHHHHhh
Confidence 999999999999999999999999 99965 66777777765
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-34 Score=223.11 Aligned_cols=236 Identities=15% Similarity=0.119 Sum_probs=166.1
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~ 109 (289)
.+|.++++...+++++|+||++||++++... |..+.+.|++ ||+|+++|+||||.|.......++.++++|+.++++
T Consensus 17 ~~g~~l~~~~~g~~~~~~vl~lHG~~~~~~~--~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 93 (299)
T 3g9x_A 17 VLGERMHYVDVGPRDGTPVLFLHGNPTSSYL--WRNIIPHVAP-SHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIE 93 (299)
T ss_dssp ETTEEEEEEEESCSSSCCEEEECCTTCCGGG--GTTTHHHHTT-TSCEEEECCTTSTTSCCCCCCCCHHHHHHHHHHHHH
T ss_pred eCCeEEEEEecCCCCCCEEEEECCCCccHHH--HHHHHHHHcc-CCEEEeeCCCCCCCCCCCCCcccHHHHHHHHHHHHH
Confidence 3788898877776678999999999998854 8889999964 899999999999999987767788999999999999
Q ss_pred HHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc-ccccchhHhhhhhc---------------
Q 022960 110 DFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE-GRLGLGYLQRIKQN--------------- 172 (289)
Q Consensus 110 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------------- 172 (289)
++ +.++++++|||+||.+++.+|.++|+ |+++|++++......... ..........+...
T Consensus 94 ~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (299)
T 3g9x_A 94 AL---GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIE 170 (299)
T ss_dssp HT---TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSHHHHHHTTSCHHHH
T ss_pred Hh---CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCcchhhhccchhhHH
Confidence 88 77789999999999999999999998 999999985443321100 00000000000000
Q ss_pred -----Ccccccccc------cccccccChhhhhhhhc---------------cchhhhhcccccCceEEEEEeCCCCccC
Q 022960 173 -----GFIDVRNKK------GKLEYRVTQESLMDRLS---------------TDIHAACHMICQDCRVLTIHGTKDKMVP 226 (289)
Q Consensus 173 -----~~~~~~~~~------~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 226 (289)
......... ................. .+..... .++++|+|+++|++|.++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~l~i~g~~D~~~~ 248 (299)
T 3g9x_A 171 GALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWL--HQSPVPKLLFWGTPGVLIP 248 (299)
T ss_dssp THHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH--HHCCSCEEEEEEEECSSSC
T ss_pred HhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhc--ccCCCCeEEEecCCCCCCC
Confidence 000000000 00000000000000000 0111111 2458999999999999999
Q ss_pred hhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcCC
Q 022960 227 AEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~~ 273 (289)
++..+.+.+.++++++++++++||+++ ++++++++.|.+++.+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~~~~ 296 (299)
T 3g9x_A 249 PAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALHHH 296 (299)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHHHSGGGCCC
T ss_pred HHHHHHHHhhCCCCeEEEeCCCCCcchhcCHHHHHHHHHHHHhhhhhc
Confidence 999999999999999999999999965 77889999999998776543
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=215.48 Aligned_cols=221 Identities=19% Similarity=0.186 Sum_probs=149.0
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHHHHHHHHhcC-CceEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQDFCAKG-RVITA 120 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~~-~~~~~ 120 (289)
+++++|||+||++++.. .|..+++.|.++||+|+++|+||||.|+... ...+++++++|+.++++.+ + .++++
T Consensus 8 ~~g~~vvllHG~~~~~~--~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~~ 82 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAW--IWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASI---PPDEKVV 82 (264)
T ss_dssp -CCCEEEEECCTTCCGG--GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHS---CTTCCEE
T ss_pred CCCCeEEEECCCccccc--hHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHh---CCCCCeE
Confidence 57889999999998874 4899999998889999999999999997643 3457889999999999987 4 46899
Q ss_pred EEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCccc-----cc---cc-----cc-c--
Q 022960 121 IIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID-----VR---NK-----KG-K-- 183 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~-----~~-~-- 183 (289)
|+||||||.+++.+|.++|+ |+++|++++...............+........+.. .. .. .. .
T Consensus 83 lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 2wfl_A 83 LLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFM 162 (264)
T ss_dssp EEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHH
T ss_pred EEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHH
Confidence 99999999999999999999 999999987432111000000000000000000000 00 00 00 0
Q ss_pred --cccccCh-h--hhhhhh-ccc--hh------hhhc-ccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCC
Q 022960 184 --LEYRVTQ-E--SLMDRL-STD--IH------AACH-MICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGA 248 (289)
Q Consensus 184 --~~~~~~~-~--~~~~~~-~~~--~~------~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
..+.... . ...... ... .. .... ....++|+|+|+|++|.++|++..+.+.+.++++++++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~ 242 (264)
T 2wfl_A 163 ALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEA 242 (264)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHCCSEEEEETTC
T ss_pred HHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCCCceEEEeCCC
Confidence 0000000 0 000000 000 00 0000 001368999999999999999999999999999999999999
Q ss_pred Ccccc-cCchHHHHHHHHHHH
Q 022960 249 DHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 249 gH~~~-~~~~~~~~~i~~fl~ 268 (289)
||+++ ++++++++.|.+|++
T Consensus 243 gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 243 DHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp CSCHHHHSHHHHHHHHHHHHC
T ss_pred CCchhhcCHHHHHHHHHHHhh
Confidence 99966 778999999999974
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=223.04 Aligned_cols=241 Identities=17% Similarity=0.195 Sum_probs=160.6
Q ss_pred eeEEeeCCCCceEEEEEeec--CC--CcEEEEEcCCCCCCCCcchHHHHHHHHH-cCccEEEEccccCCCCCCC--c--c
Q 022960 23 RRVVIPNSHGEKLVGILHET--GS--KQLVIVCHGFQSTKDRIPMVNLAAALER-EGISAFRFDFSGNGESEGS--F--L 93 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~--~~--~~~iv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~--~--~ 93 (289)
++..+. .+|.+++|...++ +. +++|||+||++++... |......|++ .||+|+++|+||||.|+.. . .
T Consensus 29 ~~~~v~-~~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~~--w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~ 105 (330)
T 3nwo_A 29 SSRTVP-FGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHN--YVANIAALADETGRTVIHYDQVGCGNSTHLPDAPAD 105 (330)
T ss_dssp CEEEEE-ETTEEEEEEEECCSSCCTTCCCEEEECCTTTCCSG--GGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGG
T ss_pred cceeEe-ecCcEEEEEEecCccCCCCCCcEEEECCCCCCchh--HHHHHHHhccccCcEEEEECCCCCCCCCCCCCCccc
Confidence 333443 4688899887776 33 4489999999988864 6667777875 5899999999999999762 1 2
Q ss_pred ccchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc------ccccchhH
Q 022960 94 YGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE------GRLGLGYL 166 (289)
Q Consensus 94 ~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~------~~~~~~~~ 166 (289)
..++..+++|+.++++.+ +.++++|+||||||.+|+.+|.++|+ |.++|+++++........ ........
T Consensus 106 ~~~~~~~a~dl~~ll~~l---g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (330)
T 3nwo_A 106 FWTPQLFVDEFHAVCTAL---GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETR 182 (330)
T ss_dssp GCCHHHHHHHHHHHHHHH---TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHHH
T ss_pred cccHHHHHHHHHHHHHHc---CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHHHH
Confidence 456788899999999999 78899999999999999999999999 999999987654221000 00000000
Q ss_pred hhhhh----cCcc-----c----ccccccccccccChhhhhhhh------------------------ccchhhhhcccc
Q 022960 167 QRIKQ----NGFI-----D----VRNKKGKLEYRVTQESLMDRL------------------------STDIHAACHMIC 209 (289)
Q Consensus 167 ~~~~~----~~~~-----~----~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~ 209 (289)
..+.. ..+. . ...... .........+...+ ..+........+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 261 (330)
T 3nwo_A 183 AALDRHEAAGTITHPDYLQAAAEFYRRHV-CRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPD 261 (330)
T ss_dssp HHHHHHHHHTCTTSHHHHHHHHHHHHHHT-CCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGGG
T ss_pred HHHHHHHhccCCCCHHHHHHHHHHHHHhh-ccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhccc
Confidence 00000 0000 0 000000 00000000000000 000000111224
Q ss_pred cCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 210 QDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 210 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
+++|+|+|+|++|.++| ...+.+.+.+|++++++++++||+++ ++++++++.|.+||++..
T Consensus 262 i~~P~Lvi~G~~D~~~p-~~~~~~~~~ip~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~~~ 323 (330)
T 3nwo_A 262 VTAPVLVIAGEHDEATP-KTWQPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQHD 323 (330)
T ss_dssp CCSCEEEEEETTCSSCH-HHHHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEeeCCCccCh-HHHHHHHHhCCCCcEEEeCCCCCchhhcCHHHHHHHHHHHHHhcc
Confidence 68999999999999875 56788999999999999999999965 778899999999998764
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=213.80 Aligned_cols=223 Identities=12% Similarity=0.114 Sum_probs=153.9
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHHHHHHHhcCC-ceEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAIVQDFCAKGR-VITAI 121 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~~l~~~~~-~~~~l 121 (289)
.+|+||++||++++... |..+.+.|+++||+|+++|+||||.|..+.. ..++.+.++|+.++++.+ +. ++++|
T Consensus 3 ~g~~vv~lHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~l 77 (258)
T 3dqz_A 3 RKHHFVLVHNAYHGAWI--WYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSL---PENEEVIL 77 (258)
T ss_dssp CCCEEEEECCTTCCGGG--GTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTS---CTTCCEEE
T ss_pred CCCcEEEECCCCCcccc--HHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHh---cccCceEE
Confidence 35899999999998854 8899999999999999999999999987654 468888899999998877 55 78999
Q ss_pred EEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHh---hhhhcCccccccc-ccccccccChhhhh--
Q 022960 122 IGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQ---RIKQNGFIDVRNK-KGKLEYRVTQESLM-- 194 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 194 (289)
+|||+||.+++.+|.++|+ |+++|++++...............+.. .+....+...... ............+.
T Consensus 78 vGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3dqz_A 78 VGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKAR 157 (258)
T ss_dssp EEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHHHH
T ss_pred EEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHHHH
Confidence 9999999999999999998 999999998544322111101000000 0000000000000 00000000000000
Q ss_pred --------------hhhccch---------hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcc
Q 022960 195 --------------DRLSTDI---------HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE 251 (289)
Q Consensus 195 --------------~~~~~~~---------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 251 (289)
....... .........++|+++++|++|.++|++..+.+.+.++++++++++++||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 237 (258)
T 3dqz_A 158 LYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVSKVYEIDGGDHM 237 (258)
T ss_dssp TSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCCSCEEEETTCCSC
T ss_pred hhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCCcccEEEcCCCCCc
Confidence 0000000 00000011268999999999999999999999999999999999999999
Q ss_pred cc-cCchHHHHHHHHHHHhhc
Q 022960 252 FT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 252 ~~-~~~~~~~~~i~~fl~~~~ 271 (289)
++ ++++++++.|.+|+++++
T Consensus 238 ~~~~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 238 VMLSKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp HHHHSHHHHHHHHHHHHHHTC
T ss_pred hhhcChHHHHHHHHHHHHHhC
Confidence 65 778899999999998753
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=226.94 Aligned_cols=243 Identities=25% Similarity=0.334 Sum_probs=171.3
Q ss_pred ceeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHH
Q 022960 21 QRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRRE 100 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~ 100 (289)
+..++.+.+.+|.++++. ..+++|+|||+||++++... |..+++.|++.||+|+++|+||||.|.......++.++
T Consensus 2 p~i~~~~~~~dG~~l~y~--~~G~gp~VV~lHG~~~~~~~--~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~~s~~~~ 77 (456)
T 3vdx_A 2 PFITVGQENSTSIDLYYE--DHGTGVPVVLIHGFPLSGHS--WERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTF 77 (456)
T ss_dssp CEEEEEEETTEEEEEEEE--EESSSEEEEEECCTTCCGGG--GTTHHHHHHHHTEEEEEECCTTSTTSCCCSSCCSHHHH
T ss_pred CeEeecccccCCeEEEEE--EeCCCCEEEEECCCCCcHHH--HHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCHHHH
Confidence 445566777889888854 44578999999999998854 88999999888999999999999999987777788999
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCcccccccccc----cchhHhhh----h
Q 022960 101 AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKRGIEGRL----GLGYLQRI----K 170 (289)
Q Consensus 101 ~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~~~~~~----~~~~~~~~----~ 170 (289)
++|+.++++++ +.++++|+|||+||.+++.+++.+ |+ |+++|++++............ .......+ .
T Consensus 78 a~dl~~~l~~l---~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (456)
T 3vdx_A 78 AADLNTVLETL---DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVK 154 (456)
T ss_dssp HHHHHHHHHHH---TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh---CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhh
Confidence 99999999999 777999999999999999998887 77 999999998654321111000 00000000 0
Q ss_pred hc-------CcccccccccccccccChhhhhhh------------------hccchhhhhcccccCceEEEEEeCCCCcc
Q 022960 171 QN-------GFIDVRNKKGKLEYRVTQESLMDR------------------LSTDIHAACHMICQDCRVLTIHGTKDKMV 225 (289)
Q Consensus 171 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 225 (289)
.. .+...................... +..+.... ..++++|+|+++|++|.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--l~~i~~PvLiI~G~~D~~v 232 (456)
T 3vdx_A 155 ADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRAD--IPRIDVPALILHGTGDRTL 232 (456)
T ss_dssp HCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTT--STTCCSCCEEEEETTCSSS
T ss_pred ccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHH--hhhCCCCEEEEEeCCCCCc
Confidence 00 000000000000001111110000 00111111 1246899999999999999
Q ss_pred Chh-hHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcC
Q 022960 226 PAE-DALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 226 ~~~-~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~ 272 (289)
|++ ..+.+.+.++++++++++++||.++ +.++++.+.|.+||++.+.
T Consensus 233 p~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 233 PIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAKALE 281 (456)
T ss_dssp CGGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHHHHHHHHHhhc
Confidence 998 7788888899999999999999965 6678999999999987653
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=221.81 Aligned_cols=244 Identities=14% Similarity=0.156 Sum_probs=166.0
Q ss_pred eeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc---cccchH
Q 022960 22 RRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF---LYGNYR 98 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~---~~~~~~ 98 (289)
.+...+...+| ++.++..+ +++|+||++||++++... |..+.+.|...||+|+++|+||||.|.... ...++.
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~-~~~~~vv~lHG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 78 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESE-GEGAPLLMIHGNSSSGAI--FAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSME 78 (279)
T ss_dssp CEEEEEEETTE-EEEEEECC-CCEEEEEEECCTTCCGGG--GHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSSHH
T ss_pred eEEEEEEcCCc-eEEEEecC-CCCCeEEEECCCCCchhH--HHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCCHH
Confidence 34556666555 56654433 478899999999998854 899999977778999999999999998743 345778
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccc--------------h
Q 022960 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGL--------------G 164 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~--------------~ 164 (289)
++++|+.++++.+ +.++++++|||+||.+++.+|..+|++.++|+++++............. .
T Consensus 79 ~~~~~~~~~~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (279)
T 4g9e_A 79 GYADAMTEVMQQL---GIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSER 155 (279)
T ss_dssp HHHHHHHHHHHHH---TCCCCEEEEETHHHHHHHHHTTTCTTCCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHH
T ss_pred HHHHHHHHHHHHh---CCCceEEEEECchHHHHHHHHhhCCcceeEEEecCCCCCCCccchhhccchhhhhcCcccccHH
Confidence 8899999999988 7778999999999999999999999988888888765433221110000 0
Q ss_pred hHhhhhhcCccccccccc-ccccccC---h----hhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHH-h
Q 022960 165 YLQRIKQNGFIDVRNKKG-KLEYRVT---Q----ESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFD-K 235 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~-~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~-~ 235 (289)
....+....+........ ....... . ..+......+..... .++++|+|+++|++|.++|++..+.+. +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 233 (279)
T 4g9e_A 156 DVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIV--AEAQLPIAVVNGRDEPFVELDFVSKVKFG 233 (279)
T ss_dssp HHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHH--HHCCSCEEEEEETTCSSBCHHHHTTCCCS
T ss_pred HHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHH--HhcCCCEEEEEcCCCcccchHHHHHHhhc
Confidence 000000000000000000 0000000 0 000000011111111 245899999999999999999998887 7
Q ss_pred hCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcCCC
Q 022960 236 FIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 236 ~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~~~ 274 (289)
.++++++++++++||+++ ++++++.+.|.+||++....+
T Consensus 234 ~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~ 273 (279)
T 4g9e_A 234 NLWEGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQLE 273 (279)
T ss_dssp SBGGGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHSSC
T ss_pred cCCCCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhhhh
Confidence 778999999999999965 778899999999999877654
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=199.86 Aligned_cols=196 Identities=23% Similarity=0.332 Sum_probs=159.9
Q ss_pred cceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCC---CCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGF---QSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL 93 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~---~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 93 (289)
+..+++.+.+.+| ++.++++.+. ++|+||++||+ ++......|..+++.|+++||.|+++|+||+|.|.....
T Consensus 4 ~~~~~~~~~~~~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 82 (208)
T 3trd_A 4 MTNEDFLIQGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYD 82 (208)
T ss_dssp CSSSCEEEECSSS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC
T ss_pred cccceEEEECCCc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCcc
Confidence 3456888999999 9999888765 67899999994 344333457889999999999999999999999987642
Q ss_pred ccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhc
Q 022960 94 YGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQN 172 (289)
Q Consensus 94 ~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (289)
......+|+.++++++.+. +.++++++|||+||.+++.++ .+|.++++|++++.......
T Consensus 83 --~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~~v~~~v~~~~~~~~~~~---------------- 143 (208)
T 3trd_A 83 --NGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQKVAQLISVAPPVFYEGF---------------- 143 (208)
T ss_dssp --TTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHSCCSEEEEESCCTTSGGG----------------
T ss_pred --chHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccCCccEEEEeccccccCCc----------------
Confidence 2245678999999999776 567999999999999999999 77789999999987611000
Q ss_pred CcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEcCCCcc
Q 022960 173 GFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHE 251 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~ 251 (289)
. ....+++|+++++|++|.++|++.++.+.+.+++ +++++++++||.
T Consensus 144 ------------------------------~--~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 191 (208)
T 3trd_A 144 ------------------------------A--SLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHF 191 (208)
T ss_dssp ------------------------------T--TCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSS
T ss_pred ------------------------------h--hhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCc
Confidence 0 0012378999999999999999999999999887 999999999999
Q ss_pred cccCchHHHHHHHHHH
Q 022960 252 FTSHQDELASLVIQFI 267 (289)
Q Consensus 252 ~~~~~~~~~~~i~~fl 267 (289)
+..+.+++.+.|.+||
T Consensus 192 ~~~~~~~~~~~i~~fl 207 (208)
T 3trd_A 192 FHGRLIELRELLVRNL 207 (208)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHh
Confidence 8876788888888887
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=217.93 Aligned_cols=237 Identities=16% Similarity=0.208 Sum_probs=158.4
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCC--c--cccchHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS--F--LYGNYRREA 101 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~--~--~~~~~~~~~ 101 (289)
.+...+|.++++... |++|+|||+||++++.. .|..+++.|.+.||+|+++|+||||.|+.+ . ...++..++
T Consensus 14 ~~~~~~g~~l~y~~~--G~g~~vvllHG~~~~~~--~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a 89 (328)
T 2cjp_A 14 KMVAVNGLNMHLAEL--GEGPTILFIHGFPELWY--SWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLV 89 (328)
T ss_dssp EEEEETTEEEEEEEE--CSSSEEEEECCTTCCGG--GGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGSHHHHH
T ss_pred eEecCCCcEEEEEEc--CCCCEEEEECCCCCchH--HHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccccHHHHH
Confidence 334457888886554 46789999999999885 499999999988999999999999999865 2 345778899
Q ss_pred HHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc----c---ccccccc--------
Q 022960 102 EDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR----G---IEGRLGL-------- 163 (289)
Q Consensus 102 ~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~----~---~~~~~~~-------- 163 (289)
+|+.++++.+ + .++++|+||||||.+|+.+|.++|+ |+++|+++++..... . .......
T Consensus 90 ~dl~~~l~~l---~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (328)
T 2cjp_A 90 GDVVALLEAI---APNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQ 166 (328)
T ss_dssp HHHHHHHHHH---CTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTBHHHHTS
T ss_pred HHHHHHHHHh---cCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccchHHHhhh
Confidence 9999999998 6 7899999999999999999999999 999999986542110 0 0000000
Q ss_pred ---------------hhHhhhhh----cC-ccc----cccccc---ccccccChhhh---hhhh---------------c
Q 022960 164 ---------------GYLQRIKQ----NG-FID----VRNKKG---KLEYRVTQESL---MDRL---------------S 198 (289)
Q Consensus 164 ---------------~~~~~~~~----~~-~~~----~~~~~~---~~~~~~~~~~~---~~~~---------------~ 198 (289)
.+...+.. .. ... ...... ........... ...+ .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (328)
T 2cjp_A 167 VPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALP 246 (328)
T ss_dssp STTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHH
T ss_pred CCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHHHhcc
Confidence 00000000 00 000 000000 00000000000 0000 0
Q ss_pred cchhh--hhcccccCceEEEEEeCCCCccChhh------HHHHHhhCCCc-EEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 199 TDIHA--ACHMICQDCRVLTIHGTKDKMVPAED------ALEFDKFIPNH-KLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 199 ~~~~~--~~~~~~~~~P~l~i~g~~D~~~~~~~------~~~~~~~~~~~-~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
..... .....++++|+|+|+|++|.++|++. ++.+.+.++++ ++++++++||+++ ++++++++.|.+||+
T Consensus 247 ~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 326 (328)
T 2cjp_A 247 INWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIYDFIQ 326 (328)
T ss_dssp HHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCHHHHSHHHHHHHHHHHHT
T ss_pred cchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCCcchhCHHHHHHHHHHHHH
Confidence 00000 01123568999999999999998742 25677888998 8999999999966 678899999999996
Q ss_pred h
Q 022960 269 A 269 (289)
Q Consensus 269 ~ 269 (289)
+
T Consensus 327 ~ 327 (328)
T 2cjp_A 327 K 327 (328)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-33 Score=216.66 Aligned_cols=233 Identities=16% Similarity=0.139 Sum_probs=162.0
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchH-HHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMV-NLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDL 104 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~ 104 (289)
..+..+|.+++ +...+++|+||++||++++... |. .+.+.|.+.||+|+++|+||||.|.... ..++.++++|+
T Consensus 26 ~~~~~~~~~l~--y~~~g~~~~vv~lHG~~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~-~~~~~~~~~~~ 100 (293)
T 3hss_A 26 MDPEFRVINLA--YDDNGTGDPVVFIAGRGGAGRT--WHPHQVPAFLAAGYRCITFDNRGIGATENAE-GFTTQTMVADT 100 (293)
T ss_dssp ECTTSCEEEEE--EEEECSSEEEEEECCTTCCGGG--GTTTTHHHHHHTTEEEEEECCTTSGGGTTCC-SCCHHHHHHHH
T ss_pred cccccccceEE--EEEcCCCCEEEEECCCCCchhh--cchhhhhhHhhcCCeEEEEccCCCCCCCCcc-cCCHHHHHHHH
Confidence 33445566666 4455688999999999999864 76 6788888889999999999999987654 45778899999
Q ss_pred HHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCc---------
Q 022960 105 RAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGF--------- 174 (289)
Q Consensus 105 ~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 174 (289)
.++++.+ +.++++|+|||+||.+++.+|.++|+ |+++|++++........... .. ....+.....
T Consensus 101 ~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~ 175 (293)
T 3hss_A 101 AALIETL---DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFF-NK-AEAELYDSGVQLPPTYDAR 175 (293)
T ss_dssp HHHHHHH---TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHH-HH-HHHHHHHHTCCCCHHHHHH
T ss_pred HHHHHhc---CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHH-HH-HHHHHHhhcccchhhHHHH
Confidence 9999998 77799999999999999999999998 99999999875443211100 00 0000000000
Q ss_pred ----ccc-----cccccccc--------cccChhhhhhhh----ccchhhhhcccccCceEEEEEeCCCCccChhhHHHH
Q 022960 175 ----IDV-----RNKKGKLE--------YRVTQESLMDRL----STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEF 233 (289)
Q Consensus 175 ----~~~-----~~~~~~~~--------~~~~~~~~~~~~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 233 (289)
... ........ .......+.... ..+.... ..++++|+|+++|++|.++|++..+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~lii~g~~D~~~~~~~~~~~ 253 (293)
T 3hss_A 176 ARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPA--YRNIAAPVLVIGFADDVVTPPYLGREV 253 (293)
T ss_dssp HHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHH--HTTCCSCEEEEEETTCSSSCHHHHHHH
T ss_pred HHHhhhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHH--HhhCCCCEEEEEeCCCCCCCHHHHHHH
Confidence 000 00000000 000000000000 0011111 124689999999999999999999999
Q ss_pred HhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 234 DKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 234 ~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
.+.++++++++++++||+++ ++++++.+.|.+||++.
T Consensus 254 ~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 254 ADALPNGRYLQIPDAGHLGFFERPEAVNTAMLKFFASV 291 (293)
T ss_dssp HHHSTTEEEEEETTCCTTHHHHSHHHHHHHHHHHHHTC
T ss_pred HHHCCCceEEEeCCCcchHhhhCHHHHHHHHHHHHHhc
Confidence 99999999999999999965 67788999999999864
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=204.89 Aligned_cols=205 Identities=19% Similarity=0.238 Sum_probs=163.7
Q ss_pred cccee--eEEeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCC---CCcchHHHHHHHHHcCccEEEEccccCCCCCCC
Q 022960 19 VVQRR--RVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTK---DRIPMVNLAAALEREGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 19 ~~~~~--~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~---~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 91 (289)
+.+.+ ++.+.+.+| ++.++++.++ ++|+||++||+++.. ....|..+++.|+++||.|+++|+||+|.|...
T Consensus 18 ~~~~e~~~~~~~~~~g-~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~ 96 (249)
T 2i3d_A 18 YFQGHMPEVIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGE 96 (249)
T ss_dssp ------CEEEEEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred cccCceeEEEEECCCc-eEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
Confidence 34445 889998888 8888877664 578999999985433 223468899999999999999999999999876
Q ss_pred ccccchHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhh
Q 022960 92 FLYGNYRREAEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRI 169 (289)
Q Consensus 92 ~~~~~~~~~~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
... .... .+|+.++++++... +.++++++|||+||.+++.++..+|+++++|+++|......
T Consensus 97 ~~~-~~~~-~~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~-------------- 160 (249)
T 2i3d_A 97 FDH-GAGE-LSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPEIEGFMSIAPQPNTYD-------------- 160 (249)
T ss_dssp CCS-SHHH-HHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTTEEEEEEESCCTTTSC--------------
T ss_pred CCC-ccch-HHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCCccEEEEEcCchhhhh--------------
Confidence 533 3344 49999999999776 33479999999999999999999999999999998754210
Q ss_pred hhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC-----CcEEEE
Q 022960 170 KQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP-----NHKLHI 244 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~ 244 (289)
. ....++++|+++++|++|.++|.+.++.+.+.++ ++++++
T Consensus 161 --------------------------------~--~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (249)
T 2i3d_A 161 --------------------------------F--SFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRT 206 (249)
T ss_dssp --------------------------------C--TTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEE
T ss_pred --------------------------------h--hhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEE
Confidence 0 0001347899999999999999999999998887 789999
Q ss_pred EcCCCcccccCchHHHHHHHHHHHhhcCCC
Q 022960 245 IEGADHEFTSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 245 ~~~~gH~~~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
+++++|.+.+.++++.+.+.+||++.+...
T Consensus 207 ~~g~~H~~~~~~~~~~~~i~~fl~~~l~~~ 236 (249)
T 2i3d_A 207 LPGANHFFNGKVDELMGECEDYLDRRLNGE 236 (249)
T ss_dssp ETTCCTTCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred ECCCCcccccCHHHHHHHHHHHHHHhcCCC
Confidence 999999988778899999999999988643
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-33 Score=214.82 Aligned_cols=223 Identities=17% Similarity=0.147 Sum_probs=150.7
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHHHHHHHHhcC-CceEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQDFCAKG-RVITAI 121 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~~-~~~~~l 121 (289)
.+++|||+||++++.. .|..+++.|++.||+|+++|+||||.|+... ...+++++++|+.++++.+ + .++++|
T Consensus 3 ~~~~vvllHG~~~~~~--~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~~l 77 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGW--SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESL---SADEKVIL 77 (273)
T ss_dssp CCCEEEEECCTTCCGG--GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTS---CSSSCEEE
T ss_pred CCCeEEEECCCCCCcc--hHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHh---ccCCCEEE
Confidence 4689999999998874 4899999999889999999999999997643 3457888999999999877 5 468999
Q ss_pred EEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCccc-----cccc-cccc----------
Q 022960 122 IGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID-----VRNK-KGKL---------- 184 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~---------- 184 (289)
+||||||.+++.+|.++|+ |+++|++++...............+........+.. .... ....
T Consensus 78 vGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
T 1xkl_A 78 VGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLA 157 (273)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHH
T ss_pred EecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHHH
Confidence 9999999999999999999 999999987432111000000000000000000000 0000 0000
Q ss_pred --ccccChh---hhhhhh-ccch--h------hhhc-ccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCC
Q 022960 185 --EYRVTQE---SLMDRL-STDI--H------AACH-MICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGAD 249 (289)
Q Consensus 185 --~~~~~~~---~~~~~~-~~~~--~------~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g 249 (289)
.+..... ...... .... . .... ....++|+++|+|++|.++|++..+.+.+.++++++++++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~~~~~~i~~aG 237 (273)
T 1xkl_A 158 HKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGAD 237 (273)
T ss_dssp HHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCCSEEEEETTCC
T ss_pred HHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCCCCeEEEeCCCC
Confidence 0000000 000000 0000 0 0000 0013689999999999999999999999999999999999999
Q ss_pred cccc-cCchHHHHHHHHHHHhhc
Q 022960 250 HEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 250 H~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
|+++ +.|+++++.|.+|+++..
T Consensus 238 H~~~~e~P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 238 HMAMLCEPQKLCASLLEIAHKYN 260 (273)
T ss_dssp SCHHHHSHHHHHHHHHHHHHHCC
T ss_pred CCchhcCHHHHHHHHHHHHHHhc
Confidence 9976 778999999999998754
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=213.66 Aligned_cols=236 Identities=17% Similarity=0.188 Sum_probs=157.7
Q ss_pred eCCCCceEEEEEeecCCCcEEEEEcCCC---CCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHH---
Q 022960 28 PNSHGEKLVGILHETGSKQLVIVCHGFQ---STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRRE--- 100 (289)
Q Consensus 28 ~~~~g~~l~~~~~~~~~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~--- 100 (289)
...+|.++++...++...|+|||+||++ ++. ..|..+.+.|++. |+|+++|+||||.|..+.. ..+++.+
T Consensus 12 ~~~~g~~l~y~~~g~~g~p~vvllHG~~~~~~~~--~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 88 (285)
T 1c4x_A 12 FPSGTLASHALVAGDPQSPAVVLLHGAGPGAHAA--SNWRPIIPDLAEN-FFVVAPDLIGFGQSEYPETYPGHIMSWVGM 88 (285)
T ss_dssp ECCTTSCEEEEEESCTTSCEEEEECCCSTTCCHH--HHHGGGHHHHHTT-SEEEEECCTTSTTSCCCSSCCSSHHHHHHH
T ss_pred EEECCEEEEEEecCCCCCCEEEEEeCCCCCCcch--hhHHHHHHHHhhC-cEEEEecCCCCCCCCCCCCcccchhhhhhh
Confidence 3457888887655422334499999997 443 3478888889876 9999999999999986553 4577888
Q ss_pred -HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc---cc-------chhHhh
Q 022960 101 -AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR---LG-------LGYLQR 168 (289)
Q Consensus 101 -~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~---~~-------~~~~~~ 168 (289)
++|+.++++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++........... .. ......
T Consensus 89 ~~~dl~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (285)
T 1c4x_A 89 RVEQILGLMNHF---GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRE 165 (285)
T ss_dssp HHHHHHHHHHHH---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHh---CCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhccccHHHHHH
Confidence 89999999988 77899999999999999999999998 99999998864321110000 00 000000
Q ss_pred hhhcCccccccc--cccc---ccc--cChhhhh---hhh------ccchh-hhhcccccCceEEEEEeCCCCccChhhHH
Q 022960 169 IKQNGFIDVRNK--KGKL---EYR--VTQESLM---DRL------STDIH-AACHMICQDCRVLTIHGTKDKMVPAEDAL 231 (289)
Q Consensus 169 ~~~~~~~~~~~~--~~~~---~~~--~~~~~~~---~~~------~~~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 231 (289)
+........... .... .+. ....... ..+ ..... ......++++|+|+++|++|.++|++.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~ 245 (285)
T 1c4x_A 166 LIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSL 245 (285)
T ss_dssp HHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHHH
T ss_pred HHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCeeeCHHHHH
Confidence 100000000000 0000 000 0000000 000 00000 00111256899999999999999999999
Q ss_pred HHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 232 EFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 232 ~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
.+.+.++++++++++++||+++ ++++++++.|.+||++
T Consensus 246 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 246 YLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp HHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred HHHHhCCCceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 9999999999999999999965 6778999999999974
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=214.79 Aligned_cols=232 Identities=19% Similarity=0.232 Sum_probs=172.5
Q ss_pred cceeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHH
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~ 99 (289)
+..+.+.++. +|.++.++++.+.+.|+||++||++++... |..+++.|+++||.|+++|+||+|.|.......++..
T Consensus 4 ~~~~~~~~~~-~g~~l~~~~~~p~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~~~~~~~ 80 (290)
T 3ksr_A 4 AKLSSIEIPV-GQDELSGTLLTPTGMPGVLFVHGWGGSQHH--SLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTRAQ 80 (290)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEEESEEEEEEECCTTCCTTT--THHHHHHHHTTTCEEECCCCTTSGGGGGGTTTCBHHH
T ss_pred CceeeEEecC-CCeEEEEEEecCCCCcEEEEeCCCCCCcCc--HHHHHHHHHHCCCEEEEeecCCCCCCCCCcccccHHH
Confidence 3456677776 688999988877788999999999998864 8999999999999999999999999988776678888
Q ss_pred HHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCccc
Q 022960 100 EAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID 176 (289)
Q Consensus 100 ~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (289)
+++|+.++++++... +.++++|+|||+||.+++.++..+| ++++++++|.......+.... .... ....+..
T Consensus 81 ~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~-~~~~~l~~p~~~~~~~~~~~~--~~~~--~~~~~~~ 155 (290)
T 3ksr_A 81 NLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP-VEWLALRSPALYKDAHWDQPK--VSLN--ADPDLMD 155 (290)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC-CSEEEEESCCCCCSSCTTSBH--HHHH--HSTTHHH
T ss_pred HHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC-CCEEEEeCcchhhhhhhhccc--cccc--CChhhhh
Confidence 999999999999876 3458999999999999999999888 899999988665432211000 0000 0000000
Q ss_pred ccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc---EEEEEcCCCcccc
Q 022960 177 VRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH---KLHIIEGADHEFT 253 (289)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~gH~~~ 253 (289)
..... . ........... .++++|+|+++|++|.+++.+..+.+.+.+++. ++++++++||.+.
T Consensus 156 ~~~~~----~--------~~~~~~~~~~~--~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 221 (290)
T 3ksr_A 156 YRRRA----L--------APGDNLALAAC--AQYKGDVLLVEAENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALS 221 (290)
T ss_dssp HTTSC----C--------CGGGCHHHHHH--HHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCC
T ss_pred hhhhh----h--------hhccccHHHHH--HhcCCCeEEEEecCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCC
Confidence 00000 0 00000111111 145889999999999999999999999998764 5999999999865
Q ss_pred c--CchHHHHHHHHHHHhhcCC
Q 022960 254 S--HQDELASLVIQFIKANYQK 273 (289)
Q Consensus 254 ~--~~~~~~~~i~~fl~~~~~~ 273 (289)
. .++++.+.+.+||++.+..
T Consensus 222 ~~~~~~~~~~~i~~fl~~~~~~ 243 (290)
T 3ksr_A 222 VKEHQQEYTRALIDWLTEMVVG 243 (290)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHhcC
Confidence 2 4578999999999988754
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-33 Score=215.24 Aligned_cols=224 Identities=14% Similarity=0.103 Sum_probs=154.0
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccc-cchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY-GNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
.++|+|||+||++++... |..+++.|.++||+|+++|+||||.|...... .++.++++|+.++++.+. +.++++|
T Consensus 10 ~~~~~vvllHG~~~~~~~--~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~--~~~~~~l 85 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWC--WYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLP--ANEKIIL 85 (267)
T ss_dssp CCCCEEEEECCTTCCGGG--GHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSC--TTSCEEE
T ss_pred CCCCeEEEECCCCCCcch--HHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcC--CCCCEEE
Confidence 468999999999998854 89999999999999999999999999887543 688888999998888772 3678999
Q ss_pred EEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchh---HhhhhhcCcccc-cccccccccccChhhh---
Q 022960 122 IGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGY---LQRIKQNGFIDV-RNKKGKLEYRVTQESL--- 193 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--- 193 (289)
+|||+||.+++.+|.++|+ |+++|++++...............+ ........+... ...............+
T Consensus 86 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
T 3sty_A 86 VGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATN 165 (267)
T ss_dssp EEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHHHHHH
T ss_pred EEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHHHHHHh
Confidence 9999999999999999998 9999999986543221110000000 000000000000 0000000000000000
Q ss_pred -------------hhhhccc-------hhhhh---cccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCc
Q 022960 194 -------------MDRLSTD-------IHAAC---HMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH 250 (289)
Q Consensus 194 -------------~~~~~~~-------~~~~~---~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 250 (289)
....... ..... .....++|+++|+|++|.++|++..+.+.+.++++++++++++||
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH 245 (267)
T 3sty_A 166 VYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDH 245 (267)
T ss_dssp TSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSCCSEEEECTTCCS
T ss_pred hcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCCCceEEEeCCCCc
Confidence 0000000 00000 000125899999999999999999999999999999999999999
Q ss_pred ccc-cCchHHHHHHHHHHHhh
Q 022960 251 EFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 251 ~~~-~~~~~~~~~i~~fl~~~ 270 (289)
+++ ++++++++.|.+|++++
T Consensus 246 ~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 246 VTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp CHHHHSHHHHHHHHHHHHHHC
T ss_pred cccccChHHHHHHHHHHHHhc
Confidence 965 77899999999999863
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=214.47 Aligned_cols=220 Identities=14% Similarity=0.132 Sum_probs=148.8
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHHHHHHHHhcC-CceEEEE
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQDFCAKG-RVITAII 122 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~~-~~~~~l~ 122 (289)
+++|||+||++.+.. .|..+++.|+++||+|+++|+||||.|+... ...+++++++|+.++++.+ + .++++|+
T Consensus 3 ~~~vvllHG~~~~~~--~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~~lv 77 (257)
T 3c6x_A 3 FAHFVLIHTICHGAW--IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEAL---PPGEKVILV 77 (257)
T ss_dssp CCEEEEECCTTCCGG--GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTS---CTTCCEEEE
T ss_pred CCcEEEEcCCccCcC--CHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhc---cccCCeEEE
Confidence 578999999998774 5999999999889999999999999997643 3467889999999999877 4 4689999
Q ss_pred EeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhh--cCcccc------------cccc--cccc
Q 022960 123 GHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQ--NGFIDV------------RNKK--GKLE 185 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------~~~~--~~~~ 185 (289)
||||||.+++.+|.++|+ |+++|++++...................... ...... .... ....
T Consensus 78 GhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (257)
T 3c6x_A 78 GESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENL 157 (257)
T ss_dssp EEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHT
T ss_pred EECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHHHHHH
Confidence 999999999999999999 9999999875321110000000000000000 000000 0000 0000
Q ss_pred cccChh---hhhhhh-ccch------h--hhh-cccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCccc
Q 022960 186 YRVTQE---SLMDRL-STDI------H--AAC-HMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF 252 (289)
Q Consensus 186 ~~~~~~---~~~~~~-~~~~------~--~~~-~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 252 (289)
+..... ...... .... . ... .....++|+|+|+|++|.++|++..+.+.+.++++++++++++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~~~~~~~i~~~gH~~ 237 (257)
T 3c6x_A 158 YTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKL 237 (257)
T ss_dssp STTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCCSEEEECCSCCSCH
T ss_pred hcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCCCCeEEEeCCCCCCc
Confidence 000000 000000 0000 0 000 00012689999999999999999999999999999999999999996
Q ss_pred c-cCchHHHHHHHHHHHh
Q 022960 253 T-SHQDELASLVIQFIKA 269 (289)
Q Consensus 253 ~-~~~~~~~~~i~~fl~~ 269 (289)
+ +.|+++++.|.+|+++
T Consensus 238 ~~e~P~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 238 QLTKTKEIAEILQEVADT 255 (257)
T ss_dssp HHHSHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHh
Confidence 5 7789999999999975
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-32 Score=231.63 Aligned_cols=246 Identities=18% Similarity=0.206 Sum_probs=171.2
Q ss_pred eeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc--ccchHH
Q 022960 22 RRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL--YGNYRR 99 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~ 99 (289)
.+...+...||.++++... +++|+||++||++++... |..+++.|.++||+|+++|+||||.|..... ..++.+
T Consensus 237 ~~~~~~~~~dg~~l~~~~~--g~~p~vv~~HG~~~~~~~--~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~~~~ 312 (555)
T 3i28_A 237 MSHGYVTVKPRVRLHFVEL--GSGPAVCLCHGFPESWYS--WRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEV 312 (555)
T ss_dssp SEEEEEEEETTEEEEEEEE--CSSSEEEEECCTTCCGGG--GTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGSHHH
T ss_pred cceeEEEeCCCcEEEEEEc--CCCCEEEEEeCCCCchhH--HHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccccHHH
Confidence 3455666668988885544 578999999999999854 8999999999999999999999999987653 556788
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc----------------
Q 022960 100 EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG---------------- 162 (289)
Q Consensus 100 ~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~---------------- 162 (289)
+++|+.++++.+ +.++++++|||+||.+++.+|..+|+ |+++|+++++............
T Consensus 313 ~~~d~~~~~~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (555)
T 3i28_A 313 LCKEMVTFLDKL---GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQE 389 (555)
T ss_dssp HHHHHHHHHHHH---TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHHHHS
T ss_pred HHHHHHHHHHHc---CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHHhhC
Confidence 899999999988 77799999999999999999999998 9999999886543221110000
Q ss_pred ------------chhHhhhhhcCccccc--------------c-cccccccccChhhhh---hhhccc------------
Q 022960 163 ------------LGYLQRIKQNGFIDVR--------------N-KKGKLEYRVTQESLM---DRLSTD------------ 200 (289)
Q Consensus 163 ------------~~~~~~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~~---~~~~~~------------ 200 (289)
..+...+......... . ............... ..+...
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (555)
T 3i28_A 390 PGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNM 469 (555)
T ss_dssp TTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTTSCH
T ss_pred CCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHHHhc
Confidence 0000000000000000 0 000000000011100 000000
Q ss_pred -----hhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcCCC
Q 022960 201 -----IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 201 -----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~~~ 274 (289)
........++++|+|+++|++|.++|++.++.+.+.++++++++++++||+++ ++++++.+.|.+||++.....
T Consensus 470 ~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 549 (555)
T 3i28_A 470 ERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDARNP 549 (555)
T ss_dssp HHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHTCC-
T ss_pred cccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCCCceEEEeCCCCCCcchhCHHHHHHHHHHHHHhccCCC
Confidence 00001112568999999999999999999999999999999999999999965 678899999999999876543
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=214.18 Aligned_cols=229 Identities=20% Similarity=0.248 Sum_probs=161.9
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~ 109 (289)
.+|.++++... +++|+||++||++++... |..+++.|++ ||.|+++|+||||.|.......+++++++|+.++++
T Consensus 55 ~~~~~~~~~~~--g~~p~vv~lhG~~~~~~~--~~~~~~~L~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~ 129 (314)
T 3kxp_A 55 IGRITLNVREK--GSGPLMLFFHGITSNSAV--FEPLMIRLSD-RFTTIAVDQRGHGLSDKPETGYEANDYADDIAGLIR 129 (314)
T ss_dssp CSSCEEEEEEE--CCSSEEEEECCTTCCGGG--GHHHHHTTTT-TSEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred ECCEEEEEEec--CCCCEEEEECCCCCCHHH--HHHHHHHHHc-CCeEEEEeCCCcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 46777876544 448899999999998854 8999999988 699999999999999876667788999999999999
Q ss_pred HHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccch-------------hHhhhhhcCcc
Q 022960 110 DFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLG-------------YLQRIKQNGFI 175 (289)
Q Consensus 110 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 175 (289)
++ +.++++++|||+||.+++.+|.++|+ |+++|++++............... ....+... ..
T Consensus 130 ~l---~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 205 (314)
T 3kxp_A 130 TL---ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEAYLAGR-YP 205 (314)
T ss_dssp HH---TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHHHHHHHHHHH-ST
T ss_pred Hh---CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHHHHHHHHHhh-cc
Confidence 98 66799999999999999999999998 999999988654332211110000 00000000 00
Q ss_pred ccc-------------ccccccccccChhh---hhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC
Q 022960 176 DVR-------------NKKGKLEYRVTQES---LMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN 239 (289)
Q Consensus 176 ~~~-------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 239 (289)
... .............. .......+...... ++++|+|+++|++|.++|++.++.+.+.+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~ 283 (314)
T 3kxp_A 206 NIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYR--DVTKPVLIVRGESSKLVSAAALAKTSRLRPD 283 (314)
T ss_dssp TSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHH--HCCSCEEEEEETTCSSSCHHHHHHHHHHCTT
T ss_pred cCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhh--cCCCCEEEEecCCCccCCHHHHHHHHHhCCC
Confidence 000 00000000000000 00000001111122 4589999999999999999999999999999
Q ss_pred cEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 240 HKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 240 ~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
++++.++++||.++ ++++++.+.|.+||++
T Consensus 284 ~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 284 LPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp SCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred ceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 99999999999965 6678899999999963
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=215.00 Aligned_cols=229 Identities=15% Similarity=0.094 Sum_probs=154.9
Q ss_pred eeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-----ccchHHHH
Q 022960 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-----YGNYRREA 101 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-----~~~~~~~~ 101 (289)
+...+|.++++...+ ++|+||++||++++... |..+++.|.+ ||+|+++|+||||.|+.... ..++.+++
T Consensus 17 ~~~~~g~~l~~~~~g--~~~~vv~lHG~~~~~~~--~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 91 (306)
T 3r40_A 17 WINTSSGRIFARVGG--DGPPLLLLHGFPQTHVM--WHRVAPKLAE-RFKVIVADLPGYGWSDMPESDEQHTPYTKRAMA 91 (306)
T ss_dssp EECCTTCCEEEEEEE--CSSEEEEECCTTCCGGG--GGGTHHHHHT-TSEEEEECCTTSTTSCCCCCCTTCGGGSHHHHH
T ss_pred EEEeCCEEEEEEEcC--CCCeEEEECCCCCCHHH--HHHHHHHhcc-CCeEEEeCCCCCCCCCCCCCCcccCCCCHHHHH
Confidence 334578889866554 67899999999999854 8999999998 89999999999999987765 56788889
Q ss_pred HHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc--ccc------------------
Q 022960 102 EDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGI--EGR------------------ 160 (289)
Q Consensus 102 ~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~--~~~------------------ 160 (289)
+|+.++++.+ +.++++|+|||+||.+++.+|.++|+ |+++|++++........ ...
T Consensus 92 ~~~~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (306)
T 3r40_A 92 KQLIEAMEQL---GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPAPLP 168 (306)
T ss_dssp HHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSCTTHH
T ss_pred HHHHHHHHHh---CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhcccchH
Confidence 9999999987 77789999999999999999999998 99999999753221000 000
Q ss_pred ------ccchhHhhhhhcCcccccccccccccccChhhhh----------------hhhc----cchhhhh----ccccc
Q 022960 161 ------LGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLM----------------DRLS----TDIHAAC----HMICQ 210 (289)
Q Consensus 161 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~----~~~~~~~----~~~~~ 210 (289)
....+...+........ ........... ..+. .+..... ...++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 242 (306)
T 3r40_A 169 ENLLGGDPDFYVKAKLASWTRAG------DLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKI 242 (306)
T ss_dssp HHHHTSCHHHHHHHHHHHTSSSS------SSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCB
T ss_pred HHHHcCCHHHHHHHHhhcccCCC------ccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCC
Confidence 00001111100000000 00000000000 0000 0000000 12356
Q ss_pred CceEEEEEeCCCCccC-hhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 211 DCRVLTIHGTKDKMVP-AEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
++|+|+++|++|.++| ....+.+.+..++++++++ ++||+++ ++++++++.|.+||++.
T Consensus 243 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 243 PVPMLALWGASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp CSCEEEEEETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC-
T ss_pred CcceEEEEecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhChHHHHHHHHHHHHhc
Confidence 9999999999999998 5667777788899999999 6899965 67788999999999864
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-33 Score=217.88 Aligned_cols=236 Identities=17% Similarity=0.164 Sum_probs=156.9
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCC---CCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQ---STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLR 105 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~ 105 (289)
.+|.++++.. .+++++|||+||++ ++. ..|..+.+.|.+. |+|+++|+||||.|. +.. ..+++.+++|+.
T Consensus 23 ~~g~~l~y~~--~g~g~~vvllHG~~~~~~~~--~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~~~~~~~~~~~~~dl~ 96 (296)
T 1j1i_A 23 AGGVETRYLE--AGKGQPVILIHGGGAGAESE--GNWRNVIPILARH-YRVIAMDMLGFGKTA-KPDIEYTQDRRIRHLH 96 (296)
T ss_dssp ETTEEEEEEE--ECCSSEEEEECCCSTTCCHH--HHHTTTHHHHTTT-SEEEEECCTTSTTSC-CCSSCCCHHHHHHHHH
T ss_pred ECCEEEEEEe--cCCCCeEEEECCCCCCcchH--HHHHHHHHHHhhc-CEEEEECCCCCCCCC-CCCCCCCHHHHHHHHH
Confidence 4688887554 44578999999997 443 3478888888876 999999999999998 433 567888899999
Q ss_pred HHHHHHHhcCC-ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc---ccc--c--chhHhhhhhcCccc
Q 022960 106 AIVQDFCAKGR-VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE---GRL--G--LGYLQRIKQNGFID 176 (289)
Q Consensus 106 ~~i~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~---~~~--~--~~~~~~~~~~~~~~ 176 (289)
++++.+ +. ++++|+||||||.+|+.+|.++|+ |+++|++++......... ... . ......+.......
T Consensus 97 ~~l~~l---~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (296)
T 1j1i_A 97 DFIKAM---NFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTND 173 (296)
T ss_dssp HHHHHS---CCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHHHHHHSCT
T ss_pred HHHHhc---CCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHHHHHHHhccC
Confidence 999887 66 789999999999999999999999 999999988643211100 000 0 00000000000000
Q ss_pred ccccccc---ccccc--C---hhhhhhhhcc------chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEE
Q 022960 177 VRNKKGK---LEYRV--T---QESLMDRLST------DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKL 242 (289)
Q Consensus 177 ~~~~~~~---~~~~~--~---~~~~~~~~~~------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 242 (289)
....... ..+.. . ...+...+.. .........++++|+|+++|++|.++|++.++.+.+.++++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~~~~ 253 (296)
T 1j1i_A 174 GFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWG 253 (296)
T ss_dssp TCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEE
T ss_pred cccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHCCCCEE
Confidence 0000000 00000 0 0001100000 0000011224689999999999999999999999999999999
Q ss_pred EEEcCCCcccc-cCchHHHHHHHHHHHhhcCCC
Q 022960 243 HIIEGADHEFT-SHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 243 ~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~~~ 274 (289)
++++++||+++ ++++++++.|.+||++....+
T Consensus 254 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 286 (296)
T 1j1i_A 254 YIIPHCGHWAMIEHPEDFANATLSFLSLRVDIT 286 (296)
T ss_dssp EEESSCCSCHHHHSHHHHHHHHHHHHHHC----
T ss_pred EEECCCCCCchhcCHHHHHHHHHHHHhccCCcC
Confidence 99999999965 678899999999999876444
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=213.43 Aligned_cols=235 Identities=13% Similarity=0.061 Sum_probs=152.7
Q ss_pred CCCceEEEEEeecC-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETG-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV 108 (289)
Q Consensus 30 ~~g~~l~~~~~~~~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 108 (289)
.+|.+++|....+| .+|+|||+||++++... |..+++.|++ +|+|+++|+||||.|+.+...++++.+++|+.+++
T Consensus 11 ~~g~~l~y~~~~~G~~~p~vvllHG~~~~~~~--w~~~~~~L~~-~~rvia~DlrGhG~S~~~~~~~~~~~~a~dl~~ll 87 (276)
T 2wj6_A 11 VFDNKLSYIDNQRDTDGPAILLLPGWCHDHRV--YKYLIQELDA-DFRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEIL 87 (276)
T ss_dssp ETTEEEEEEECCCCCSSCEEEEECCTTCCGGG--GHHHHHHHTT-TSCEEEECCTTCSSSCCCCCCCCHHHHHHHHHHHH
T ss_pred eCCeEEEEEEecCCCCCCeEEEECCCCCcHHH--HHHHHHHHhc-CCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 46888887655224 35899999999999854 9999999986 59999999999999987655678899999999999
Q ss_pred HHHHhcCCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCcccc-cccccc----c-chh---HhhhhhcCcccc
Q 022960 109 QDFCAKGRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKR-GIEGRL----G-LGY---LQRIKQNGFIDV 177 (289)
Q Consensus 109 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~-~~~~~~----~-~~~---~~~~~~~~~~~~ 177 (289)
+.+ ++++++|+||||||.+|+.+|.++ |+ |+++|++++...... ...... . ..+ ...+........
T Consensus 88 ~~l---~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (276)
T 2wj6_A 88 DQL---GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGTHGLFDVWLDGH 164 (276)
T ss_dssp HHH---TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCTTTHHHHHHHHHHHHHTTB
T ss_pred HHh---CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCcchHHHHHHHHHHHhhccc
Confidence 999 888999999999999999999999 99 999999986431110 000000 0 000 000000000000
Q ss_pred cccc-----cccccccChhhhhh---hhccchh----hhhcccccCceEEEEEeCCCCcc--ChhhHHHHHhhCCCcEEE
Q 022960 178 RNKK-----GKLEYRVTQESLMD---RLSTDIH----AACHMICQDCRVLTIHGTKDKMV--PAEDALEFDKFIPNHKLH 243 (289)
Q Consensus 178 ~~~~-----~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~P~l~i~g~~D~~~--~~~~~~~~~~~~~~~~~~ 243 (289)
.... ...........+.. ....... .......+++|+++++|..|... .....+.+.+.+|+++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~p~a~~~ 244 (276)
T 2wj6_A 165 DEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQHPWFSYA 244 (276)
T ss_dssp CCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHCTTEEEE
T ss_pred chHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhCCCeEEE
Confidence 0000 00000000000000 0000000 00111245789988876433222 234556788889999999
Q ss_pred EEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 244 IIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 244 ~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
+++++||+++ ++|+++++.|.+||++.
T Consensus 245 ~i~~~gH~~~~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 245 KLGGPTHFPAIDVPDRAAVHIREFATAI 272 (276)
T ss_dssp ECCCSSSCHHHHSHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcccccCHHHHHHHHHHHHhhc
Confidence 9999999965 77899999999999864
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-32 Score=213.29 Aligned_cols=236 Identities=19% Similarity=0.237 Sum_probs=154.7
Q ss_pred CCCceEEEEEeecCCC-cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSK-QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAI 107 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~-~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~ 107 (289)
.+|.++++..++++++ ++|||+||++++... +|..+ ..+.+.||+|+++|+||||.|+.+. ...+++.+++|+.++
T Consensus 12 ~~g~~l~~~~~g~~~~~~~vvllHG~~~~~~~-~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~dl~~~ 89 (293)
T 1mtz_A 12 VNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHD-YLLSL-RDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEAL 89 (293)
T ss_dssp ETTEEEEEEEECCSSCSEEEEEECCTTTCCSG-GGGGG-GGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHHHHH
T ss_pred ECCEEEEEEEECCCCCCCeEEEEeCCCCcchh-HHHHH-HHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHHHHHHH
Confidence 3588888776666544 899999998766543 34444 4455779999999999999998765 336778889999999
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc------ccccchhHhhhhh----cCcc-
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE------GRLGLGYLQRIKQ----NGFI- 175 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~------~~~~~~~~~~~~~----~~~~- 175 (289)
++.+. +.++++|+||||||.+|+.+|.++|+ |+++|++++......... ..........+.. ..+.
T Consensus 90 ~~~l~--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (293)
T 1mtz_A 90 RSKLF--GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYEN 167 (293)
T ss_dssp HHHHH--TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCTTC
T ss_pred HHHhc--CCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHHHhhccCCcCh
Confidence 99872 34589999999999999999999998 999999998754321100 0000000000000 0000
Q ss_pred ----c----cccccc--ccccccC-hhh---------hhhhhc----------cchhhhhcccccCceEEEEEeCCCCcc
Q 022960 176 ----D----VRNKKG--KLEYRVT-QES---------LMDRLS----------TDIHAACHMICQDCRVLTIHGTKDKMV 225 (289)
Q Consensus 176 ----~----~~~~~~--~~~~~~~-~~~---------~~~~~~----------~~~~~~~~~~~~~~P~l~i~g~~D~~~ 225 (289)
. ...... ...+... ... +..... ..........++++|+|+++|++| .+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D-~~ 246 (293)
T 1mtz_A 168 PEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYD-EV 246 (293)
T ss_dssp HHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTC-SS
T ss_pred HHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCEEEEeeCCC-CC
Confidence 0 000000 0000000 000 000000 000001111246899999999999 67
Q ss_pred ChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 226 PAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
+++.++.+.+.++++++++++++||.++ ++++++++.|.+||++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 247 TPNVARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 292 (293)
T ss_dssp CHHHHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHhCCCceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 7888999999999999999999999965 77889999999999764
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-31 Score=197.50 Aligned_cols=200 Identities=21% Similarity=0.252 Sum_probs=164.0
Q ss_pred ceeeEEeeCCCCceEEEEEeecC-C----CcEEEEEcCCC---CCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG-S----KQLVIVCHGFQ---STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~-~----~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
..+.+.+++.+| ++.++++.|. . +|+||++||++ +......|..+++.|+++||.|+++|+||+|.|....
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 87 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSF 87 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCC
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCc
Confidence 456788888888 7777766543 2 78999999964 3333345788999999999999999999999998765
Q ss_pred cccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhh
Q 022960 93 LYGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQ 171 (289)
Q Consensus 93 ~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
.. .....+|+.++++++... +.++++++|||+||.+++.++..+ .++++|++++......
T Consensus 88 ~~--~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-~v~~~v~~~~~~~~~~---------------- 148 (220)
T 2fuk_A 88 DH--GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL-EPQVLISIAPPAGRWD---------------- 148 (220)
T ss_dssp CT--TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH-CCSEEEEESCCBTTBC----------------
T ss_pred cc--CchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc-cccEEEEecccccchh----------------
Confidence 22 256689999999999776 556899999999999999999988 8999999998765432
Q ss_pred cCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC-CCcEEEEEcCCCc
Q 022960 172 NGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI-PNHKLHIIEGADH 250 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH 250 (289)
+ ......+|+++++|++|.++|.+.++.+.+.+ ++++++.+++++|
T Consensus 149 --~-------------------------------~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 195 (220)
T 2fuk_A 149 --F-------------------------------SDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSH 195 (220)
T ss_dssp --C-------------------------------TTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCT
T ss_pred --h-------------------------------hhcccCCcEEEEECCCCcccCHHHHHHHHHHhCcCCcEEEeCCCCc
Confidence 0 00112579999999999999999999999998 7899999999999
Q ss_pred ccccCchHHHHHHHHHHHhhcCC
Q 022960 251 EFTSHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 251 ~~~~~~~~~~~~i~~fl~~~~~~ 273 (289)
.+..+++++.+.+.+||++++..
T Consensus 196 ~~~~~~~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 196 FFHRKLIDLRGALQHGVRRWLPA 218 (220)
T ss_dssp TCTTCHHHHHHHHHHHHGGGCSS
T ss_pred eehhhHHHHHHHHHHHHHHHhhc
Confidence 98777888999999999998864
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-33 Score=214.48 Aligned_cols=226 Identities=16% Similarity=0.175 Sum_probs=157.6
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYRREAEDLRAI 107 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~~~ 107 (289)
.+|.++++. ..+++|+||++||++++... |..+.+.|++ ||+|+++|+||||.|.... ...++.++++|+.++
T Consensus 10 ~~~~~~~y~--~~g~~~~vv~~HG~~~~~~~--~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 84 (278)
T 3oos_A 10 TPRGKFEYF--LKGEGPPLCVTHLYSEYNDN--GNTFANPFTD-HYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLEAI 84 (278)
T ss_dssp ETTEEEEEE--EECSSSEEEECCSSEECCTT--CCTTTGGGGG-TSEEEEECCTTSTTSCCCSSGGGGSHHHHHHHHHHH
T ss_pred cCCceEEEE--ecCCCCeEEEEcCCCcchHH--HHHHHHHhhc-CceEEEEcCCCCCCCCCCCCcccCcHHHHHHHHHHH
Confidence 356677744 45578899999999999865 7888888887 8999999999999998764 355778889999999
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc--------cc---cchhHhhhhhcCcc
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG--------RL---GLGYLQRIKQNGFI 175 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~ 175 (289)
++.+ +.++++++|||+||.+++.+|.++|+ |+++|++++.......... .. .......+......
T Consensus 85 ~~~l---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (278)
T 3oos_A 85 REAL---YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTV 161 (278)
T ss_dssp HHHT---TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSC
T ss_pred HHHh---CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccccC
Confidence 9888 77799999999999999999999998 9999999987651100000 00 00000000000000
Q ss_pred -----------------------cccccccccccccChhhhhh-----hhccchhhhhcccccCceEEEEEeCCCCccCh
Q 022960 176 -----------------------DVRNKKGKLEYRVTQESLMD-----RLSTDIHAACHMICQDCRVLTIHGTKDKMVPA 227 (289)
Q Consensus 176 -----------------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 227 (289)
........ .......+.. ....+..... .++++|+|+++|++|.++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~ 237 (278)
T 3oos_A 162 QEERKALSREWALMSFYSEEKLEEALKLPNS--GKTVGNRLNYFRQVEYKDYDVRQKL--KFVKIPSFIYCGKHDVQCPY 237 (278)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHHTTSCCC--CEECHHHHHHHHHTTGGGCBCHHHH--TTCCSCEEEEEETTCSSSCH
T ss_pred chHHHHHHHHHhhcccCCcHHHHHHhhcccc--chhHHHHHHHhhhcccccccHHHHH--hCCCCCEEEEEeccCCCCCH
Confidence 00000000 0000000000 0011111112 24589999999999999999
Q ss_pred hhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHH
Q 022960 228 EDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFI 267 (289)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl 267 (289)
+.++.+.+.++++++++++++||+++ ++++++.+.|.+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 238 IFSCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp HHHHHHHHHSTTEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred HHHHHHHhhCCCcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 99999999999999999999999965 67888999998885
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=201.89 Aligned_cols=204 Identities=22% Similarity=0.220 Sum_probs=166.0
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccc--
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY-- 94 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-- 94 (289)
..+..+.+.++. +|.++.++++.+. ++|+||++||++++...+.+..+++.|+++||.|+++|+||+|.|......
T Consensus 8 ~~~~~~~~~~~~-~g~~l~~~~~~p~~~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~ 86 (223)
T 2o2g_A 8 HQPQEYAVSVSV-GEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRH 86 (223)
T ss_dssp CCCCEEEEEEEE-TTEEEEEEEECCTTCCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCS
T ss_pred CCceeeEEEEec-CCeEEEEEEecCCCCceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhc
Confidence 346677888886 8889998877654 689999999999988754567899999999999999999999988654333
Q ss_pred --cchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhh
Q 022960 95 --GNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQR 168 (289)
Q Consensus 95 --~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 168 (289)
.++..+++|+.++++++... +.++++++|||+||.+++.++..+|+ ++++|++++......
T Consensus 87 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~------------- 153 (223)
T 2o2g_A 87 LRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAP------------- 153 (223)
T ss_dssp STTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGCT-------------
T ss_pred ccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcCH-------------
Confidence 57788899999999999776 34589999999999999999999998 999999998532110
Q ss_pred hhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCC
Q 022960 169 IKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGA 248 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (289)
... .++++|+++++|++|.++|.+..+.+.+..++.+++.++++
T Consensus 154 ----------------------------------~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (223)
T 2o2g_A 154 ----------------------------------SAL--PHVKAPTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRA 197 (223)
T ss_dssp ----------------------------------TTG--GGCCSCEEEEEETTCHHHHHHHHHHHHHCCSSEEEEEETTC
T ss_pred ----------------------------------HHH--hcCCCCEEEEEccccCCCCHHHHHHHHhhCCCeEEEEeCCC
Confidence 001 13478999999999999987777777776688999999999
Q ss_pred CcccccC--chHHHHHHHHHHHhhc
Q 022960 249 DHEFTSH--QDELASLVIQFIKANY 271 (289)
Q Consensus 249 gH~~~~~--~~~~~~~i~~fl~~~~ 271 (289)
+|.+... ++++.+.+.+||++++
T Consensus 198 ~H~~~~~~~~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 198 SHLFEEPGALTAVAQLASEWFMHYL 222 (223)
T ss_dssp CTTCCSTTHHHHHHHHHHHHHHHHC
T ss_pred CcccCChHHHHHHHHHHHHHHHHhc
Confidence 9996542 3789999999999876
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-32 Score=219.73 Aligned_cols=249 Identities=15% Similarity=0.110 Sum_probs=168.1
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC--------CCcEEEEEcCCCCCCCCcchH------HHHHHHHHcCccEEEEcccc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG--------SKQLVIVCHGFQSTKDRIPMV------NLAAALEREGISAFRFDFSG 84 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~--------~~~~iv~~hG~~~~~~~~~~~------~~~~~l~~~G~~v~~~d~~G 84 (289)
++..+...+.+.||.++.++.+.++ ++|+||++||++++... |. .++..|+++||+|+++|+||
T Consensus 24 ~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~--~~~~~~~~~~a~~l~~~G~~vi~~D~~G 101 (377)
T 1k8q_A 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATN--WISNLPNNSLAFILADAGYDVWLGNSRG 101 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGG--GSSSCTTTCHHHHHHHTTCEEEECCCTT
T ss_pred CCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhh--hhcCCCcccHHHHHHHCCCCEEEecCCC
Confidence 4566788899999999998877543 67899999999998754 43 34558999999999999999
Q ss_pred CCCCCCC-----cc----ccchHHHHH-HHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCC----CccEEEEecc
Q 022960 85 NGESEGS-----FL----YGNYRREAE-DLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYN----DISIVINISG 149 (289)
Q Consensus 85 ~G~s~~~-----~~----~~~~~~~~~-d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p----~v~~~v~~~~ 149 (289)
||.|... .. ..++.++++ |+.++++++.+. +.++++++||||||.+++.+|..+| .|+++|+++|
T Consensus 102 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~ 181 (377)
T 1k8q_A 102 NTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAP 181 (377)
T ss_dssp STTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESC
T ss_pred CCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCC
Confidence 9999762 11 457788888 999999887554 7789999999999999999999998 4999999998
Q ss_pred CCccccccc--cccc------------------c-hhHhhhh----hc---------------Cccc-ccccc------c
Q 022960 150 RFNLKRGIE--GRLG------------------L-GYLQRIK----QN---------------GFID-VRNKK------G 182 (289)
Q Consensus 150 ~~~~~~~~~--~~~~------------------~-~~~~~~~----~~---------------~~~~-~~~~~------~ 182 (289)
......... .... . .....+. .. .... ..... .
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (377)
T 1k8q_A 182 VATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLS 261 (377)
T ss_dssp CSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHT
T ss_pred chhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhc
Confidence 654321100 0000 0 0000000 00 0000 00000 0
Q ss_pred ccccccChhhhhh---h-----h-ccc------hh--------hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC
Q 022960 183 KLEYRVTQESLMD---R-----L-STD------IH--------AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN 239 (289)
Q Consensus 183 ~~~~~~~~~~~~~---~-----~-~~~------~~--------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 239 (289)
..........+.. . + ..+ .. ......++++|+|+++|++|.++|++.++.+.+.+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 341 (377)
T 1k8q_A 262 HNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPN 341 (377)
T ss_dssp TCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTT
T ss_pred cCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCcC
Confidence 0000000000000 0 0 000 00 0011235689999999999999999999999999999
Q ss_pred cE-EEEEcCCCcccc----cCchHHHHHHHHHHHh
Q 022960 240 HK-LHIIEGADHEFT----SHQDELASLVIQFIKA 269 (289)
Q Consensus 240 ~~-~~~~~~~gH~~~----~~~~~~~~~i~~fl~~ 269 (289)
.+ +++++++||..+ +.++++.+.|.+||++
T Consensus 342 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 342 LIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred cccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 87 999999999965 5567899999999975
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-32 Score=206.93 Aligned_cols=223 Identities=19% Similarity=0.150 Sum_probs=158.0
Q ss_pred ecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-ccc-chHHHHHHHHHHHHHHHhcCCce
Q 022960 41 ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYG-NYRREAEDLRAIVQDFCAKGRVI 118 (289)
Q Consensus 41 ~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~-~~~~~~~d~~~~i~~l~~~~~~~ 118 (289)
.++++|+||++||++++... |..+++.|+++||.|+++|+||||.|.... ... ++.++.+|+.++++++... .++
T Consensus 18 ~~~~~~~vv~~HG~~~~~~~--~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~ 94 (251)
T 3dkr_A 18 YEGTDTGVVLLHAYTGSPND--MNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK-YAK 94 (251)
T ss_dssp ECCSSEEEEEECCTTCCGGG--GHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT-CSE
T ss_pred cCCCCceEEEeCCCCCCHHH--HHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh-cCC
Confidence 35578899999999999864 899999999999999999999999996543 233 6788899999999999776 679
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccc-cChhhhhhh
Q 022960 119 TAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYR-VTQESLMDR 196 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 196 (289)
++++|||+||.+++.++..+|+ ++++++++|............ ..+...+........ ....+. .....+...
T Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 169 (251)
T 3dkr_A 95 VFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF-LKYAEYMNRLAGKSD----ESTQILAYLPGQLAAI 169 (251)
T ss_dssp EEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH-HHHHHHHHHHHTCCC----CHHHHHHHHHHHHHHH
T ss_pred eEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH-HHHHHHHHhhcccCc----chhhHHhhhHHHHHHH
Confidence 9999999999999999999998 999999988766433222111 222221111100000 000000 000000000
Q ss_pred hccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-c--EEEEEcCCCcccccC--chHHHHHHHHHHHhhc
Q 022960 197 LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-H--KLHIIEGADHEFTSH--QDELASLVIQFIKANY 271 (289)
Q Consensus 197 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~--~~~~~~~~gH~~~~~--~~~~~~~i~~fl~~~~ 271 (289)
............++++|+|+++|++|.++|++.++.+.+.+++ . ++++++++||.++.+ ++++.+.|.+||++..
T Consensus 170 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 170 DQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp HHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTTSTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCcccccccchhHHHHHHHHHHHhhc
Confidence 0000001111224589999999999999999999999999877 5 899999999997643 6889999999998754
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=211.08 Aligned_cols=235 Identities=14% Similarity=0.116 Sum_probs=162.1
Q ss_pred eeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccC-CCCCCCccccchHHH
Q 022960 22 RRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGN-GESEGSFLYGNYRRE 100 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-G~s~~~~~~~~~~~~ 100 (289)
.+...+.. ++.+++++..+++++|+||++||++++... |..+++.|++ ||+|+++|+||| |.|.......++.++
T Consensus 45 ~~~~~v~~-~~~~~~~~~~g~~~~~~vv~lHG~~~~~~~--~~~~~~~L~~-g~~vi~~D~~G~gG~s~~~~~~~~~~~~ 120 (306)
T 2r11_A 45 CKSFYIST-RFGQTHVIASGPEDAPPLVLLHGALFSSTM--WYPNIADWSS-KYRTYAVDIIGDKNKSIPENVSGTRTDY 120 (306)
T ss_dssp CEEEEECC-TTEEEEEEEESCTTSCEEEEECCTTTCGGG--GTTTHHHHHH-HSEEEEECCTTSSSSCEECSCCCCHHHH
T ss_pred cceEEEec-CCceEEEEeeCCCCCCeEEEECCCCCCHHH--HHHHHHHHhc-CCEEEEecCCCCCCCCCCCCCCCCHHHH
Confidence 34445554 455788777666678999999999998854 8889999987 899999999999 888766556678889
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc-------chhHhhhhhc
Q 022960 101 AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG-------LGYLQRIKQN 172 (289)
Q Consensus 101 ~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 172 (289)
++|+.++++.+ +.++++|+|||+||.+|+.+|..+|+ |+++|+++|............. ..+...+...
T Consensus 121 ~~~l~~~l~~l---~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (306)
T 2r11_A 121 ANWLLDVFDNL---GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFLNW 197 (306)
T ss_dssp HHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHHHHH
T ss_pred HHHHHHHHHhc---CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999988 77899999999999999999999998 9999999987654321111000 0000000000
Q ss_pred CcccccccccccccccChhhhhhhh---------------ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHH-hh
Q 022960 173 GFIDVRNKKGKLEYRVTQESLMDRL---------------STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFD-KF 236 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~-~~ 236 (289)
+..... ....+..........+ ...... ...++++|+|+++|++|.++|++.++++. +.
T Consensus 198 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 272 (306)
T 2r11_A 198 -MMNDQN--VLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDE--ELRSARVPILLLLGEHEVIYDPHSALHRASSF 272 (306)
T ss_dssp -HTTTCC--CSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHH--HHHTCCSCEEEEEETTCCSSCHHHHHHHHHHH
T ss_pred -hhCCcc--ccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHH--HHhcCCCCEEEEEeCCCcccCHHHHHHHHHHH
Confidence 000000 0000000000000000 000111 11246899999999999999998887544 56
Q ss_pred CCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 237 IPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 237 ~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
++++++++++++||+++ ++++++.+.|.+||+
T Consensus 273 ~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 273 VPDIEAEVIKNAGHVLSMEQPTYVNERVMRFFN 305 (306)
T ss_dssp STTCEEEEETTCCTTHHHHSHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCCCCcccCHHHHHHHHHHHHh
Confidence 89999999999999965 667899999999985
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-32 Score=212.25 Aligned_cols=230 Identities=16% Similarity=0.200 Sum_probs=151.8
Q ss_pred ceEEEEEeecCCCc-EEEEEcCCCCCCCC-cchHHHH-HHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHHH
Q 022960 33 EKLVGILHETGSKQ-LVIVCHGFQSTKDR-IPMVNLA-AALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAIV 108 (289)
Q Consensus 33 ~~l~~~~~~~~~~~-~iv~~hG~~~~~~~-~~~~~~~-~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i 108 (289)
.++++... ++++ +|||+||++.+... ..|..+. +.|.+. |+|+++|+||||.|+.... ..+++.+++|+.+++
T Consensus 25 ~~l~y~~~--g~g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l 101 (289)
T 1u2e_A 25 LRIHFNDC--GQGDETVVLLHGSGPGATGWANFSRNIDPLVEAG-YRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVV 101 (289)
T ss_dssp EEEEEEEE--CCCSSEEEEECCCSTTCCHHHHTTTTHHHHHHTT-CEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHH
T ss_pred EEEEEecc--CCCCceEEEECCCCcccchhHHHHHhhhHHHhcC-CeEEEEcCCCCCCCCCCCccccCHHHHHHHHHHHH
Confidence 67775544 4455 99999999732211 2466677 788775 9999999999999987654 567788889999999
Q ss_pred HHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc---ccchh-----------HhhhhhcC
Q 022960 109 QDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR---LGLGY-----------LQRIKQNG 173 (289)
Q Consensus 109 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~---~~~~~-----------~~~~~~~~ 173 (289)
+.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++........... ..... ........
T Consensus 102 ~~l---~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (289)
T 1u2e_A 102 DQL---DIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIF 178 (289)
T ss_dssp HHT---TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTT
T ss_pred HHh---CCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHh
Confidence 887 77899999999999999999999999 99999998764311110000 00000 00000000
Q ss_pred cccccccccc-c--cc---ccChhhhhhhh---c----cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc
Q 022960 174 FIDVRNKKGK-L--EY---RVTQESLMDRL---S----TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH 240 (289)
Q Consensus 174 ~~~~~~~~~~-~--~~---~~~~~~~~~~~---~----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 240 (289)
.......... . .+ ......+.... . ..........++++|+|+++|++|.++|++.++.+.+.++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 258 (289)
T 1u2e_A 179 VFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGS 258 (289)
T ss_dssp SSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTTC
T ss_pred hcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCCc
Confidence 0000000000 0 00 00000011000 0 000001112246899999999999999999999999999999
Q ss_pred EEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 241 KLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 241 ~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
++++++++||+++ ++++++++.|.+||+
T Consensus 259 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 287 (289)
T 1u2e_A 259 ELHIFRDCGHWAQWEHADAFNQLVLNFLA 287 (289)
T ss_dssp EEEEESSCCSCHHHHTHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCchhhcCHHHHHHHHHHHhc
Confidence 9999999999965 677889999999985
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-31 Score=196.14 Aligned_cols=195 Identities=21% Similarity=0.362 Sum_probs=160.1
Q ss_pred ceeeEEeeCCCCceEEEEEe-ecCCCcEEEEEcCCCCCCCCcchHH--HHHHHHHcCccEEEEccccCCCC---CCCccc
Q 022960 21 QRRRVVIPNSHGEKLVGILH-ETGSKQLVIVCHGFQSTKDRIPMVN--LAAALEREGISAFRFDFSGNGES---EGSFLY 94 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~-~~~~~~~iv~~hG~~~~~~~~~~~~--~~~~l~~~G~~v~~~d~~G~G~s---~~~~~~ 94 (289)
..++..+. .+|.+++++++ ..+++|+||++||++++... |.. +.+.|+++||.|+++|+||+|.| ......
T Consensus 3 ~~~~~~~~-~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~ 79 (207)
T 3bdi_A 3 ALQEEFID-VNGTRVFQRKMVTDSNRRSIALFHGYSFTSMD--WDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGID 79 (207)
T ss_dssp CCEEEEEE-ETTEEEEEEEECCTTCCEEEEEECCTTCCGGG--GGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCCT
T ss_pred cceeEEEe-eCCcEEEEEEEeccCCCCeEEEECCCCCCccc--cchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCCC
Confidence 34444444 47888987755 45588999999999998864 888 99999999999999999999999 665544
Q ss_pred c-chHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhc
Q 022960 95 G-NYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQN 172 (289)
Q Consensus 95 ~-~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (289)
. +..+.++++..+++.+ +.++++++|||+||.+++.++..+|+ ++++|+++|..... +
T Consensus 80 ~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----------~------- 139 (207)
T 3bdi_A 80 RGDLKHAAEFIRDYLKAN---GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES----------L------- 139 (207)
T ss_dssp TCCHHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG----------G-------
T ss_pred cchHHHHHHHHHHHHHHc---CCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc----------h-------
Confidence 4 7777888888888776 66799999999999999999999998 99999999862211 0
Q ss_pred CcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCccc
Q 022960 173 GFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF 252 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 252 (289)
.... .++++|+++++|++|.+++.+..+.+.+.+++++++.+++++|.+
T Consensus 140 -----------------------------~~~~--~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 188 (207)
T 3bdi_A 140 -----------------------------KGDM--KKIRQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPV 188 (207)
T ss_dssp -----------------------------HHHH--TTCCSCEEEEEETTCTTTTHHHHHHHHHHSTTCEEEEETTCCSCH
T ss_pred -----------------------------hHHH--hhccCCEEEEEECCCCccchHHHHHHHHhcCCceEEEeCCCCCCc
Confidence 0011 134789999999999999999999999999999999999999996
Q ss_pred c-cCchHHHHHHHHHHHh
Q 022960 253 T-SHQDELASLVIQFIKA 269 (289)
Q Consensus 253 ~-~~~~~~~~~i~~fl~~ 269 (289)
+ ++++++.+.|.+||++
T Consensus 189 ~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 189 YIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp HHHSHHHHHHHHHHHHHT
T ss_pred cccCHHHHHHHHHHHHhh
Confidence 5 5678899999999975
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=212.73 Aligned_cols=232 Identities=14% Similarity=0.042 Sum_probs=158.3
Q ss_pred CCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH
Q 022960 31 HGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 31 ~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 110 (289)
+|.++++...++.++|+|||+||++++... |..+++.|++. |+|+++|+||||.|..+....++.++++|+.++++.
T Consensus 7 ~g~~l~~~~~g~~~~~~vv~lHG~~~~~~~--~~~~~~~L~~~-~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~ 83 (264)
T 3ibt_A 7 NGTLMTYSESGDPHAPTLFLLSGWCQDHRL--FKNLAPLLARD-FHVICPDWRGHDAKQTDSGDFDSQTLAQDLLAFIDA 83 (264)
T ss_dssp TTEECCEEEESCSSSCEEEEECCTTCCGGG--GTTHHHHHTTT-SEEEEECCTTCSTTCCCCSCCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCCCeEEEEcCCCCcHhH--HHHHHHHHHhc-CcEEEEccccCCCCCCCccccCHHHHHHHHHHHHHh
Confidence 677888776666668999999999999854 89999999764 999999999999999876677889999999999998
Q ss_pred HHhcCCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCccccccccccc--------chhHhhhhhcCccccccc
Q 022960 111 FCAKGRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKRGIEGRLG--------LGYLQRIKQNGFIDVRNK 180 (289)
Q Consensus 111 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 180 (289)
+ +.++++|+||||||.+++.+|.++ |+ |+++|++++............. ...........+......
T Consensus 84 l---~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
T 3ibt_A 84 K---GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQSFFDEWAETTDNA 160 (264)
T ss_dssp T---TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHHHHHHHHHHHHHTTCCCH
T ss_pred c---CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhhHHHHHHHHHHHhcccCCcH
Confidence 8 777999999999999999999999 98 9999999987621111110000 000000000000000000
Q ss_pred -----ccccccccChhhhhhhh---ccchh----hhhcccccCceEEEEEe--CCCCccChhhHHHHHhhCCCcEEEEEc
Q 022960 181 -----KGKLEYRVTQESLMDRL---STDIH----AACHMICQDCRVLTIHG--TKDKMVPAEDALEFDKFIPNHKLHIIE 246 (289)
Q Consensus 181 -----~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~P~l~i~g--~~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
............+.... ..... ......++++|+++++| +.|...+.+..+.+.+.++++++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (264)
T 3ibt_A 161 DVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIP 240 (264)
T ss_dssp HHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHHHHHHCTTEEEEECC
T ss_pred HHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHHHHHHHhCCCceEEEcC
Confidence 00000000000010000 00000 00111256999999965 555555677788899999999999999
Q ss_pred CCCcccc-cCchHHHHHHHHHHH
Q 022960 247 GADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 247 ~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
++||+++ ++++++++.|.+||+
T Consensus 241 ~~gH~~~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 241 GRTHFPSLENPVAVAQAIREFLQ 263 (264)
T ss_dssp CSSSCHHHHCHHHHHHHHHHHTC
T ss_pred CCCCcchhhCHHHHHHHHHHHHh
Confidence 9999965 678899999999985
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-32 Score=212.03 Aligned_cols=218 Identities=20% Similarity=0.243 Sum_probs=150.3
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc----cccchHHHHHHHHHHHHHHHhcCCceEE
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF----LYGNYRREAEDLRAIVQDFCAKGRVITA 120 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~----~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 120 (289)
+|+|||+||++++.. .|..+.+.|++ +|+|+++|+||||.|+... ...++..+++|+.++++.+ +.++++
T Consensus 20 ~~~vvllHG~~~~~~--~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~ 93 (271)
T 1wom_A 20 KASIMFAPGFGCDQS--VWNAVAPAFEE-DHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEAL---DLKETV 93 (271)
T ss_dssp SSEEEEECCTTCCGG--GGTTTGGGGTT-TSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHT---TCSCEE
T ss_pred CCcEEEEcCCCCchh--hHHHHHHHHHh-cCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHc---CCCCeE
Confidence 478999999999885 48888889977 5999999999999998643 2346788899999999988 778999
Q ss_pred EEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc---ccccccc----hhHhhhhhc------Cccc-cc-cccccc
Q 022960 121 IIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG---IEGRLGL----GYLQRIKQN------GFID-VR-NKKGKL 184 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~---~~~~~~~----~~~~~~~~~------~~~~-~~-~~~~~~ 184 (289)
|+||||||.+|+.+|.++|+ |+++|++++....... ....... .+...+... .+.. .. ......
T Consensus 94 lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (271)
T 1wom_A 94 FVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPE 173 (271)
T ss_dssp EEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTTCHH
T ss_pred EEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCchH
Confidence 99999999999999999999 9999999875321110 0000000 000000000 0000 00 000000
Q ss_pred c---c-----ccChhhhh----hhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCccc
Q 022960 185 E---Y-----RVTQESLM----DRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF 252 (289)
Q Consensus 185 ~---~-----~~~~~~~~----~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 252 (289)
. + ........ .....+..... .++++|+|+++|++|.++|.+..+.+.+.++++++++++++||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 251 (271)
T 1wom_A 174 IKEELESRFCSTDPVIARQFAKAAFFSDHREDL--SKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCP 251 (271)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHH--TTCCSCEEEEEEETCSSSCHHHHHHHHHHSSSEEEEEEEEESSCH
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhc--cccCCCEEEEEcCCCCcCCHHHHHHHHHHCCCCEEEEeCCCCcCc
Confidence 0 0 00000000 00011111111 246899999999999999999999999999999999999999996
Q ss_pred c-cCchHHHHHHHHHHHhh
Q 022960 253 T-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 253 ~-~~~~~~~~~i~~fl~~~ 270 (289)
+ ++++++++.|.+||+++
T Consensus 252 ~~e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 252 HMSHPDETIQLIGDYLKAH 270 (271)
T ss_dssp HHHCHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhc
Confidence 5 77889999999999865
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.8e-31 Score=211.74 Aligned_cols=236 Identities=17% Similarity=0.172 Sum_probs=162.1
Q ss_pred CCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc--ccchHHHHHHHH
Q 022960 30 SHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL--YGNYRREAEDLR 105 (289)
Q Consensus 30 ~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~d~~ 105 (289)
.+|.++++...++. ++|+||++||++++... |..+++.|+++||+|+++|+||||.|..... ..++..+++|+.
T Consensus 10 ~~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~~~~~ 87 (356)
T 2e3j_A 10 CRGTRIHAVADSPPDQQGPLVVLLHGFPESWYS--WRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDVV 87 (356)
T ss_dssp ETTEEEEEEEECCTTCCSCEEEEECCTTCCGGG--GTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHHHHHHH
T ss_pred cCCeEEEEEEecCCCCCCCEEEEECCCCCcHHH--HHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHHHHHHH
Confidence 46888988776653 68899999999998854 8889999998899999999999999987643 457788899999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc----------ccc------cccccc-------
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN----------LKR------GIEGRL------- 161 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~----------~~~------~~~~~~------- 161 (289)
++++.+ +.++++++|||+||.+++.++.++|+ |+++|++++... ... .+....
T Consensus 88 ~~~~~l---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (356)
T 2e3j_A 88 GVLDSY---GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWY 164 (356)
T ss_dssp HHHHHT---TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCGGGSSCCSSCSSCCSCHHHHHHSSSCSSEEEH
T ss_pred HHHHHc---CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcccccccccCCCCCcccccchHHHHHhhcCCcHHH
Confidence 999988 77899999999999999999999998 999999987651 100 000000
Q ss_pred -----------------cchhHhhhhhcCcc-------------------------------------ccccc---cccc
Q 022960 162 -----------------GLGYLQRIKQNGFI-------------------------------------DVRNK---KGKL 184 (289)
Q Consensus 162 -----------------~~~~~~~~~~~~~~-------------------------------------~~~~~---~~~~ 184 (289)
...+...+...... ..... ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (356)
T 2e3j_A 165 QDYFAVQDGIITEIEEDLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARLKDAFVYPETM 244 (356)
T ss_dssp HHHHHHCSHHHHHHHTTHHHHHHHHHHHTSHHHHHHHHHCCC-------CCCGGGTSTTSTTEEETTSCGGGGCCCCSSC
T ss_pred HHHHhcccchHHHHHHhHHHHHHHHhhccccchhhccchhhcccccccccccccccccccccccccchhhhhcccccccc
Confidence 00000000000000 00000 0000
Q ss_pred ccccChhh---hhhhh---------------ccch--hhhhcccccCceEEEEEeCCCCccCh--hhHHHHHhhCCCc-E
Q 022960 185 EYRVTQES---LMDRL---------------STDI--HAACHMICQDCRVLTIHGTKDKMVPA--EDALEFDKFIPNH-K 241 (289)
Q Consensus 185 ~~~~~~~~---~~~~~---------------~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~-~ 241 (289)
........ +...+ .... ........+++|+|+++|++|.++|. +.++.+.+.++++ +
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~p~~~~~~~~l~~~~p~~~~ 324 (356)
T 2e3j_A 245 PAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWGAQAIERAHEVMPNYRG 324 (356)
T ss_dssp CTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTSCCCSCEEEEEETTCHHHHHTHHHHHTHHHHCTTEEE
T ss_pred cccCCHHHHHHHHHHhcccCCchhHHHHHhcccChhhhHhhcCCccCCCEEEEecCCCccccccHHHHHHHHHhCcCcce
Confidence 00000000 00000 0000 00001135699999999999999984 8889999999998 9
Q ss_pred EEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 242 LHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 242 ~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
+++++++||+++ ++++++++.|.+||++.
T Consensus 325 ~~~i~~aGH~~~~e~p~~~~~~i~~fl~~~ 354 (356)
T 2e3j_A 325 THMIADVGHWIQQEAPEETNRLLLDFLGGL 354 (356)
T ss_dssp EEEESSCCSCHHHHSHHHHHHHHHHHHHTS
T ss_pred EEEecCcCcccchhCHHHHHHHHHHHHhhc
Confidence 999999999965 77889999999999753
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.98 E-value=5.9e-32 Score=214.49 Aligned_cols=233 Identities=14% Similarity=0.131 Sum_probs=155.2
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIV 108 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i 108 (289)
.+|.++++...+++++|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+... ..+++..+++|+.+++
T Consensus 28 ~~g~~l~y~~~G~g~~~~vvllHG~~~~~~--~w~~~~~~L~~~-~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ll 104 (318)
T 2psd_A 28 VLDSFINYYDSEKHAENAVIFLHGNATSSY--LWRHVVPHIEPV-ARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWF 104 (318)
T ss_dssp ETTEEEEEEECCSCTTSEEEEECCTTCCGG--GGTTTGGGTTTT-SEEEEECCTTSTTCCCCTTSCCSHHHHHHHHHHHH
T ss_pred eCCeEEEEEEcCCCCCCeEEEECCCCCcHH--HHHHHHHHhhhc-CeEEEEeCCCCCCCCCCCCCccCHHHHHHHHHHHH
Confidence 468888876666666679999999999884 488899999876 899999999999998753 2357788899999999
Q ss_pred HHHHhcCC-ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc---ccccccccchhHhhh--------------
Q 022960 109 QDFCAKGR-VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK---RGIEGRLGLGYLQRI-------------- 169 (289)
Q Consensus 109 ~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~---~~~~~~~~~~~~~~~-------------- 169 (289)
+.+ +. ++++|+||||||.+|+.+|.++|+ |+++|++++..... ....... .....+
T Consensus 105 ~~l---~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 179 (318)
T 2psd_A 105 ELL---NLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIE--EDIALIKSEEGEKMVLENNF 179 (318)
T ss_dssp TTS---CCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCH--HHHHHHHSTHHHHHHTTTCH
T ss_pred Hhc---CCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHH--HHHHHHhcccchhhhhcchH
Confidence 877 77 799999999999999999999999 99999987532211 0000000 000000
Q ss_pred -----hhcCccccccccc--c--cccccC---hhhhh---hhhcc------ch----h-hhhccccc-CceEEEEEeCCC
Q 022960 170 -----KQNGFIDVRNKKG--K--LEYRVT---QESLM---DRLST------DI----H-AACHMICQ-DCRVLTIHGTKD 222 (289)
Q Consensus 170 -----~~~~~~~~~~~~~--~--~~~~~~---~~~~~---~~~~~------~~----~-~~~~~~~~-~~P~l~i~g~~D 222 (289)
............. . ..+... ..... ..... .. . .......+ ++|+|+|+|++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D 259 (318)
T 2psd_A 180 FVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPG 259 (318)
T ss_dssp HHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEEEC
T ss_pred HHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeEEEEeccc
Confidence 0000000000000 0 000000 00000 00000 00 0 00011245 899999999999
Q ss_pred CccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcCC
Q 022960 223 KMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~~ 273 (289)
++++ .++.+.+.+++++++++ ++||+++ ++++++++.|.+||++....
T Consensus 260 -~~~~-~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 308 (318)
T 2psd_A 260 -FFSN-AIVEGAKKFPNTEFVKV-KGLHFLQEDAPDEMGKYIKSFVERVLKN 308 (318)
T ss_dssp -SSHH-HHHHHHTTSSSEEEEEE-EESSSGGGTCHHHHHHHHHHHHHHHHC-
T ss_pred -cCcH-HHHHHHHhCCCcEEEEe-cCCCCCHhhCHHHHHHHHHHHHHHhhcc
Confidence 8887 88889999999999999 6799976 66789999999999876543
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.9e-31 Score=209.24 Aligned_cols=240 Identities=15% Similarity=0.112 Sum_probs=151.1
Q ss_pred eeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchHHH
Q 022960 23 RRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYRRE 100 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~ 100 (289)
+...+...+|.++++...+++++++|||+||++++...+.+ ...+...||+|+++|+||||.|.... ...++..+
T Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~g~~vvllHG~~~~~~~~~~---~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 91 (317)
T 1wm1_A 15 DSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHH---RQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHL 91 (317)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCCGGG---GGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHH
T ss_pred eeeEEEcCCCcEEEEEEcCCCCCCcEEEECCCCCcccchhh---hhhccccCCeEEEECCCCCCCCCCCcccccccHHHH
Confidence 34456666888998776666567889999999876532112 23333468999999999999997643 24567888
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc--------cccccc---hhH--
Q 022960 101 AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGI--------EGRLGL---GYL-- 166 (289)
Q Consensus 101 ~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~--------~~~~~~---~~~-- 166 (289)
++|+.++++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++........ ...... .+.
T Consensus 92 ~~dl~~l~~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (317)
T 1wm1_A 92 VADIERLREMA---GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSI 168 (317)
T ss_dssp HHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTT
T ss_pred HHHHHHHHHHc---CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHHHhh
Confidence 99999999888 78899999999999999999999999 99999998654321100 000000 000
Q ss_pred ----------hh----hhhcCc----------ccc----cccccccc-cccChhh-------hh------hhhccchh-h
Q 022960 167 ----------QR----IKQNGF----------IDV----RNKKGKLE-YRVTQES-------LM------DRLSTDIH-A 203 (289)
Q Consensus 167 ----------~~----~~~~~~----------~~~----~~~~~~~~-~~~~~~~-------~~------~~~~~~~~-~ 203 (289)
.. +..... ... ........ ....... +. ..+..... .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (317)
T 1wm1_A 169 LSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQL 248 (317)
T ss_dssp SCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHH
T ss_pred ccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccccchhh
Confidence 00 000000 000 00000000 0000000 00 00000000 0
Q ss_pred hhcccccC-ceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccC--chHHHHHHHHHHH
Q 022960 204 ACHMICQD-CRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSH--QDELASLVIQFIK 268 (289)
Q Consensus 204 ~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~i~~fl~ 268 (289)
.....++. +|+|+++|++|.++|++.++.+.+.+|++++++++++||.++.+ ++++.+.|.+|+.
T Consensus 249 ~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 249 LRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATDRFAG 316 (317)
T ss_dssp HHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHHHHTC
T ss_pred HhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcchHHHHHHHHHHHhc
Confidence 11112354 99999999999999999999999999999999999999987532 3556666666653
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.8e-32 Score=215.43 Aligned_cols=228 Identities=14% Similarity=0.165 Sum_probs=154.7
Q ss_pred CCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHHHHH
Q 022960 31 HGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 31 ~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~ 109 (289)
++.++++..+++ ++|+||++||++++... |..+.+.| ||+|+++|+||||.|.... ...++.++++|+.++++
T Consensus 68 ~~~~~~~~~~g~-~~~~vv~~hG~~~~~~~--~~~~~~~l---g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~ 141 (330)
T 3p2m_A 68 QAGAISALRWGG-SAPRVIFLHGGGQNAHT--WDTVIVGL---GEPALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLR 141 (330)
T ss_dssp EETTEEEEEESS-SCCSEEEECCTTCCGGG--GHHHHHHS---CCCEEEECCTTSTTSCCCSSCBCCHHHHHHHHHHHHH
T ss_pred cCceEEEEEeCC-CCCeEEEECCCCCccch--HHHHHHHc---CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 345677665554 46889999999999854 88888777 8999999999999998443 45677888999999999
Q ss_pred HHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc------------------chhHhhhh
Q 022960 110 DFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG------------------LGYLQRIK 170 (289)
Q Consensus 110 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~------------------~~~~~~~~ 170 (289)
.+ +.++++|+|||+||.+|+.+|.++|+ |+++|++++............. ........
T Consensus 142 ~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (330)
T 3p2m_A 142 EL---APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTI 218 (330)
T ss_dssp HS---STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHH
T ss_pred Hh---CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHH
Confidence 88 77789999999999999999999998 9999999975432111000000 00000000
Q ss_pred hcC-c----------ccccccccccccccChhhhhhhhc-cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC
Q 022960 171 QNG-F----------IDVRNKKGKLEYRVTQESLMDRLS-TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP 238 (289)
Q Consensus 171 ~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (289)
... . ...........+......+..... .+..... .++++|+|+++|++|.++|++.++.+.+.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~ 296 (330)
T 3p2m_A 219 AAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDV--DALSAPITLVRGGSSGFVTDQDTAELHRRAT 296 (330)
T ss_dssp HHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHH--HHCCSCEEEEEETTCCSSCHHHHHHHHHHCS
T ss_pred hcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHH--hhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 000 0 000000000000000000000000 0001111 2458999999999999999999999999999
Q ss_pred CcE-EEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 239 NHK-LHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 239 ~~~-~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+++ +++++++||+++ ++++++.+.|.+||++
T Consensus 297 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 297 HFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp SEEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred CCeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 999 999999999965 6778999999999864
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.9e-32 Score=210.18 Aligned_cols=218 Identities=16% Similarity=0.206 Sum_probs=150.5
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCC----ccccchHHHHHHHHHHHHHHHhcCCceE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS----FLYGNYRREAEDLRAIVQDFCAKGRVIT 119 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~----~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 119 (289)
.+|+||++||++++... |..+.+.|.+ ||+|+++|+||||.|... ....++.+.++|+.++++.+ +.+++
T Consensus 19 ~~p~vv~~HG~~~~~~~--~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 92 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQSA--WNRILPFFLR-DYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDAL---GIDCC 92 (269)
T ss_dssp CSSEEEEECCTTCCGGG--GTTTGGGGTT-TCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHT---TCCSE
T ss_pred CCCEEEEEeCCCCcHHH--HHHHHHHHhC-CcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhc---CCCeE
Confidence 55899999999998854 8889999988 899999999999999762 23347788899999999887 77799
Q ss_pred EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc--ccccch----hHhhhhhcC------ccc-ccccccccc
Q 022960 120 AIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE--GRLGLG----YLQRIKQNG------FID-VRNKKGKLE 185 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~------~~~-~~~~~~~~~ 185 (289)
+|+|||+||.+|+.+|.++|+ |+++|++++......... ...... ....+.... +.. .........
T Consensus 93 ~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (269)
T 4dnp_A 93 AYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADVPAA 172 (269)
T ss_dssp EEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSSCHHH
T ss_pred EEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCCChhH
Confidence 999999999999999999999 999999998654321110 000000 000000000 000 000000000
Q ss_pred --------cccChhhh----hhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEcCCCccc
Q 022960 186 --------YRVTQESL----MDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHEF 252 (289)
Q Consensus 186 --------~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~ 252 (289)
........ ......+..... .++++|+++++|++|.++|++.++.+.+.+++ +++++++++||++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 250 (269)
T 4dnp_A 173 VREFSRTLFNMRPDITLFVSRTVFNSDMRGVL--GLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNIEGHLP 250 (269)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGG--GGCCSCEEEEEEESBTTBCHHHHHHHHHHSSSCEEEEEEEEESSCH
T ss_pred HHHHHHHHHccCcchhhhHhhhhcchhhHhhh--ccccCCEEEEecCCCcccCHHHHHHHHHhCCCCceEEEeCCCCCCc
Confidence 00000000 000111111122 24589999999999999999999999999998 7999999999996
Q ss_pred c-cCchHHHHHHHHHHHh
Q 022960 253 T-SHQDELASLVIQFIKA 269 (289)
Q Consensus 253 ~-~~~~~~~~~i~~fl~~ 269 (289)
+ ++++++.+.|.+||++
T Consensus 251 ~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 251 HLSAPTLLAQELRRALSH 268 (269)
T ss_dssp HHHCHHHHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHHHhh
Confidence 5 6778899999999965
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=211.55 Aligned_cols=219 Identities=19% Similarity=0.237 Sum_probs=153.2
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc----cccchHHHHHHHHHHHHHHHhcCCceEE
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF----LYGNYRREAEDLRAIVQDFCAKGRVITA 120 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~----~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 120 (289)
+|+||++||++++.. .|..+++.|++ ||+|+++|+||||.|.... ...++.+.++|+.++++.+ +.++++
T Consensus 28 ~~~vv~lHG~~~~~~--~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 101 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQN--MWRFMLPELEK-QFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVAL---DLVNVS 101 (282)
T ss_dssp SCEEEEECCTTCCGG--GGTTTHHHHHT-TSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHT---TCCSEE
T ss_pred CCeEEEECCCCCCcc--hHHHHHHHHhc-CceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHc---CCCceE
Confidence 389999999999985 48899999988 8999999999999998764 3347788899999999888 778999
Q ss_pred EEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc---cccch----hHhhhhh-----------cCcccccccc
Q 022960 121 IIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG---RLGLG----YLQRIKQ-----------NGFIDVRNKK 181 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~---~~~~~----~~~~~~~-----------~~~~~~~~~~ 181 (289)
|+|||+||.+++.++.++|+ |+++|++++.......... ..... ....+.. ..+.......
T Consensus 102 lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (282)
T 3qvm_A 102 IIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSE 181 (282)
T ss_dssp EEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTSCHH
T ss_pred EEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCccchh
Confidence 99999999999999999998 9999999987644322100 00000 0000000 0000000000
Q ss_pred -----cccccccChhhhhh----hhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCccc
Q 022960 182 -----GKLEYRVTQESLMD----RLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF 252 (289)
Q Consensus 182 -----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 252 (289)
.............. ....+..... .++++|+++++|++|.++|.+.++.+.+.++++++++++++||.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 259 (282)
T 3qvm_A 182 LIGELSGSFCTTDPIVAKTFAKATFFSDYRSLL--EDISTPALIFQSAKDSLASPEVGQYMAENIPNSQLELIQAEGHCL 259 (282)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGG--GGCCSCEEEEEEEECTTCCHHHHHHHHHHSSSEEEEEEEEESSCH
T ss_pred hHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHH--hcCCCCeEEEEeCCCCcCCHHHHHHHHHhCCCCcEEEecCCCCcc
Confidence 00000000000000 0111111112 245899999999999999999999999999999999999999996
Q ss_pred c-cCchHHHHHHHHHHHhhc
Q 022960 253 T-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 253 ~-~~~~~~~~~i~~fl~~~~ 271 (289)
+ +.++++.+.|.+||++..
T Consensus 260 ~~~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 260 HMTDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp HHHCHHHHHHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHHHHhcC
Confidence 5 667889999999998754
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=196.04 Aligned_cols=201 Identities=16% Similarity=0.156 Sum_probs=160.4
Q ss_pred eeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-------
Q 022960 22 RRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF------- 92 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~------- 92 (289)
.+++.+++.+|.++.++++.+. ++|+||++||++++.. .|..+++.|+++||.|+++|+||+|.|....
T Consensus 3 ~~~~~~~~~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 80 (236)
T 1zi8_A 3 TEGISIQSYDGHTFGALVGSPAKAPAPVIVIAQDIFGVNA--FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQ 80 (236)
T ss_dssp CTTCCEECTTSCEECEEEECCSSCSEEEEEEECCTTBSCH--HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHH
T ss_pred cceEEEecCCCCeEEEEEECCCCCCCCEEEEEcCCCCCCH--HHHHHHHHHHhCCcEEEeccccccCCCcccccccchhh
Confidence 3467788889999998887664 5689999999998875 4899999999999999999999999886421
Q ss_pred --------cccchHHHHHHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCccccccccccc
Q 022960 93 --------LYGNYRREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLG 162 (289)
Q Consensus 93 --------~~~~~~~~~~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~ 162 (289)
...++....+|+.++++++.++. .++++++|||+||.+++.++..+| ++++++++|....
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-~~~~v~~~~~~~~--------- 150 (236)
T 1zi8_A 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY-VDRAVGYYGVGLE--------- 150 (236)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC-SSEEEEESCSSGG---------
T ss_pred hhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC-ccEEEEecCcccc---------
Confidence 22345667899999999997652 368999999999999999999998 9999988774211
Q ss_pred chhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC---CC
Q 022960 163 LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI---PN 239 (289)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~ 239 (289)
+..... .++++|+++++|++|.++|.+.++.+.+.+ ++
T Consensus 151 -------------------------------------~~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 191 (236)
T 1zi8_A 151 -------------------------------------KQLNKV--PEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPL 191 (236)
T ss_dssp -------------------------------------GCGGGG--GGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTT
T ss_pred -------------------------------------cchhhh--hhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCC
Confidence 000011 134789999999999999999999988877 57
Q ss_pred cEEEEEcCCCcccccC-c--------hHHHHHHHHHHHhhcCC
Q 022960 240 HKLHIIEGADHEFTSH-Q--------DELASLVIQFIKANYQK 273 (289)
Q Consensus 240 ~~~~~~~~~gH~~~~~-~--------~~~~~~i~~fl~~~~~~ 273 (289)
++++++++++|.+..+ + +++.+.+.+||++++..
T Consensus 192 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 192 LQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSR 234 (236)
T ss_dssp EEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC-
T ss_pred ceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 8999999999986533 2 46889999999988754
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-31 Score=207.62 Aligned_cols=123 Identities=14% Similarity=0.086 Sum_probs=97.9
Q ss_pred eeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchHHH
Q 022960 23 RRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYRRE 100 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~ 100 (289)
+...+...+|.++++...+++++++|||+||++++... ..+...+...||+|+++|+||||.|.... ...++...
T Consensus 12 ~~~~~~~~~g~~l~y~~~G~~~g~pvvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 88 (313)
T 1azw_A 12 QQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCN---DKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDL 88 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCC---GGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHHH
T ss_pred ccceEEcCCCCEEEEEecCCCCCCeEEEECCCCCcccc---HHHHHhcCcCcceEEEECCCCCcCCCCCcccccccHHHH
Confidence 34456666888898776666667889999998876532 12223343468999999999999997643 24567888
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 101 AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 101 ~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
++|+.++++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++..
T Consensus 89 ~~dl~~l~~~l---~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 89 VADIERLRTHL---GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp HHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHh---CCCceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 99999999988 78899999999999999999999999 99999998754
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=222.51 Aligned_cols=250 Identities=15% Similarity=0.165 Sum_probs=168.9
Q ss_pred eeEEeeCCCCceEEEEEeecCC---------CcEEEEEcCCCCCCCCcchHHHHHHHH----HcCc---cEEEEccccCC
Q 022960 23 RRVVIPNSHGEKLVGILHETGS---------KQLVIVCHGFQSTKDRIPMVNLAAALE----REGI---SAFRFDFSGNG 86 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~~---------~~~iv~~hG~~~~~~~~~~~~~~~~l~----~~G~---~v~~~d~~G~G 86 (289)
.+..+...||.++++..+++.. +|+||++||++++... |..+++.|+ +.|| +|+++|+||||
T Consensus 21 ~~~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~--~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G 98 (398)
T 2y6u_A 21 PQSTLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVV--WEYYLPRLVAADAEGNYAIDKVLLIDQVNHG 98 (398)
T ss_dssp TTSBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGG--GGGGGGGSCCCBTTTTEEEEEEEEECCTTSH
T ss_pred CCccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHH--HHHHHHHHHHhhhhcCcceeEEEEEcCCCCC
Confidence 3455677899999998776532 3799999999999854 888899998 3489 99999999999
Q ss_pred CCCCCc-----cccchHHHHHHHHHHHHHHHh---cCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc--
Q 022960 87 ESEGSF-----LYGNYRREAEDLRAIVQDFCA---KGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR-- 155 (289)
Q Consensus 87 ~s~~~~-----~~~~~~~~~~d~~~~i~~l~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-- 155 (289)
.|.... ...++.++++|+.++++.+.. ....+++|+||||||.+++.+|..+|+ |+++|++++......
T Consensus 99 ~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 178 (398)
T 2y6u_A 99 DSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAI 178 (398)
T ss_dssp HHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCC
T ss_pred CCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccc
Confidence 987532 245778889999999987642 122349999999999999999999999 999999998765411
Q ss_pred -----ccc---ccccchhHhhhhhc------------------Cccccccc--------------------ccccccccC
Q 022960 156 -----GIE---GRLGLGYLQRIKQN------------------GFIDVRNK--------------------KGKLEYRVT 189 (289)
Q Consensus 156 -----~~~---~~~~~~~~~~~~~~------------------~~~~~~~~--------------------~~~~~~~~~ 189 (289)
... ......+...+... .+...... .........
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 2y6u_A 179 GAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKME 258 (398)
T ss_dssp SCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSC
T ss_pred ccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCC
Confidence 000 00001111111000 00000000 000000000
Q ss_pred hhhhhhhhc----cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHH
Q 022960 190 QESLMDRLS----TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVI 264 (289)
Q Consensus 190 ~~~~~~~~~----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~ 264 (289)
.......+. ...........+++|+|+++|++|.++|++.++.+.+.++++++++++++||+++ ++++++.+.|.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 338 (398)
T 2y6u_A 259 QAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQNYHLDVIPGGSHLVNVEAPDLVIERIN 338 (398)
T ss_dssp HHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHH
T ss_pred chhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCCCceEEEeCCCCccchhcCHHHHHHHHH
Confidence 000000000 0000011122468999999999999999999999999999999999999999965 66789999999
Q ss_pred HHHHhhcCCC
Q 022960 265 QFIKANYQKD 274 (289)
Q Consensus 265 ~fl~~~~~~~ 274 (289)
+||.+.+...
T Consensus 339 ~fl~~~~~~~ 348 (398)
T 2y6u_A 339 HHIHEFVLTS 348 (398)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhH
Confidence 9999876543
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-32 Score=211.55 Aligned_cols=231 Identities=12% Similarity=0.093 Sum_probs=159.7
Q ss_pred CCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccc----cchHHHHHHH
Q 022960 29 NSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY----GNYRREAEDL 104 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~----~~~~~~~~d~ 104 (289)
..+|.++++... +++|+||++||++++... |..+++.|++. |+|+++|+||||.|...... .++.++++|+
T Consensus 14 ~~~g~~l~~~~~--g~~~~vv~lHG~~~~~~~--~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2qvb_A 14 EIAGKRMAYIDE--GKGDAIVFQHGNPTSSYL--WRNIMPHLEGL-GRLVACDLIGMGASDKLSPSGPDRYSYGEQRDFL 88 (297)
T ss_dssp EETTEEEEEEEE--SSSSEEEEECCTTCCGGG--GTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHH
T ss_pred EECCEEEEEEec--CCCCeEEEECCCCchHHH--HHHHHHHHhhc-CeEEEEcCCCCCCCCCCCCccccCcCHHHHHHHH
Confidence 346888886554 457999999999998854 88888888775 99999999999999876544 6888999999
Q ss_pred HHHHHHHHhcCC-ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc--cccccccc-----------------
Q 022960 105 RAIVQDFCAKGR-VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR--GIEGRLGL----------------- 163 (289)
Q Consensus 105 ~~~i~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~~~~~~----------------- 163 (289)
.++++.+ +. ++++++||||||.+++.+|.++|+ |+++|++++...... ........
T Consensus 89 ~~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (297)
T 2qvb_A 89 FALWDAL---DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALEH 165 (297)
T ss_dssp HHHHHHT---TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTHHHHHHTT
T ss_pred HHHHHHc---CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccchhhhccc
Confidence 9999988 67 789999999999999999999998 999999998654211 00000000
Q ss_pred -hhHhhhhhcCccccccccc------ccccc-cChhhhhhhhc---------------cchhhhhcccccCceEEEEEeC
Q 022960 164 -GYLQRIKQNGFIDVRNKKG------KLEYR-VTQESLMDRLS---------------TDIHAACHMICQDCRVLTIHGT 220 (289)
Q Consensus 164 -~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~---------------~~~~~~~~~~~~~~P~l~i~g~ 220 (289)
.+...+............. ..... .........+. .+..... .++++|+|+++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~lii~G~ 243 (297)
T 2qvb_A 166 NIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWL--EETDMPKLFINAE 243 (297)
T ss_dssp CHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHH--HHCCSCEEEEEEE
T ss_pred cHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhc--ccccccEEEEecC
Confidence 0000000000000000000 00000 00001100000 0111111 2458999999999
Q ss_pred CCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 221 KDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 221 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
+|.++|.+..+.+.+.+++ +++++ ++||+++ ++++++.+.|.+||++..
T Consensus 244 ~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~~ 293 (297)
T 2qvb_A 244 PGAIITGRIRDYVRSWPNQ-TEITV-PGVHFVQEDSPEEIGAAIAQFVRRLR 293 (297)
T ss_dssp ECSSSCHHHHHHHHTSSSE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCC-eEEEe-cCccchhhhCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 99999 9999966 667899999999998764
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=195.19 Aligned_cols=238 Identities=14% Similarity=0.154 Sum_probs=160.5
Q ss_pred eeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCC---CCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcccc
Q 022960 22 RRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQ---STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYG 95 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~ 95 (289)
..+..+.+.||.++.++++.+. ++|+||++||++ ++... ++..+.+.|++. |.|+++|+||+|.+.
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~~~~~~~------ 74 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKAND-LSPQYIDILTEH-YDLIQLSYRLLPEVS------ 74 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTTC-SCHHHHHHHTTT-EEEEEECCCCTTTSC------
T ss_pred ceEEEEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchhh-hHHHHHHHHHhC-ceEEeeccccCCccc------
Confidence 4567788889999998877553 678999999988 55443 345788888887 999999999998653
Q ss_pred chHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCccccccccccc-----------c
Q 022960 96 NYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLG-----------L 163 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~-----------~ 163 (289)
+....+|+.++++++.+. +.++++|+||||||.+++.++.. +.++++|+++|............. .
T Consensus 75 -~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (275)
T 3h04_A 75 -LDCIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD-RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSINE 152 (275)
T ss_dssp -HHHHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH-SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHTTSCH
T ss_pred -cchhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc-CCccEEEeccccccccccccccccchhhcccccchH
Confidence 355678888888888776 66799999999999999999999 559999999998765332211111 0
Q ss_pred hhHhhhhhcCccccccccccccccc-----Chhhhhhhhcc------ch-hhhhcccccCceEEEEEeCCCCccChhhHH
Q 022960 164 GYLQRIKQNGFIDVRNKKGKLEYRV-----TQESLMDRLST------DI-HAACHMICQDCRVLTIHGTKDKMVPAEDAL 231 (289)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~------~~-~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 231 (289)
.....+...... ........... ....+...+.. .. ........++ |+|+++|++|.++|++.++
T Consensus 153 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~~~~ 229 (275)
T 3h04_A 153 TMIAQLTSPTPV--VQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPVEESE 229 (275)
T ss_dssp HHHHTTSCSSCC--SSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCTHHHH
T ss_pred HHHhcccCCCCc--CCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCChHHHH
Confidence 011110000000 00000000000 00000000000 00 0000012345 9999999999999999999
Q ss_pred HHHhhCCCcEEEEEcCCCcccc-cCc---hHHHHHHHHHHHhhcC
Q 022960 232 EFDKFIPNHKLHIIEGADHEFT-SHQ---DELASLVIQFIKANYQ 272 (289)
Q Consensus 232 ~~~~~~~~~~~~~~~~~gH~~~-~~~---~~~~~~i~~fl~~~~~ 272 (289)
.+.+.+++.++++++++||.+. +.+ +++.+.+.+||++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 230 HIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp HHHTTCSSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999976 444 5899999999998763
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=196.72 Aligned_cols=187 Identities=20% Similarity=0.238 Sum_probs=154.2
Q ss_pred CCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHH--HHHHHHHcCccEEEEccccCCCCCCCccccchHHHH--H
Q 022960 30 SHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVN--LAAALEREGISAFRFDFSGNGESEGSFLYGNYRREA--E 102 (289)
Q Consensus 30 ~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~--~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~--~ 102 (289)
.+|.+++++.+.|. ++|+||++||++++... |.. +.+.|+++||.|+++|+||+|.|.......++.... +
T Consensus 14 ~~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 91 (210)
T 1imj_A 14 VQGQALFFREALPGSGQARFSVLLLHGIRFSSET--WQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGS 91 (210)
T ss_dssp ETTEEECEEEEECSSSCCSCEEEECCCTTCCHHH--HHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCCTH
T ss_pred eCCeEEEEEEeCCCCCCCCceEEEECCCCCccce--eecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcchhhhcchHH
Confidence 37888998877542 67899999999998854 777 589999999999999999999998776555556656 8
Q ss_pred HHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccc
Q 022960 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKK 181 (289)
Q Consensus 103 d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (289)
++.++++.+ +.++++++|||+||.+++.++..+|+ ++++|+++|......
T Consensus 92 ~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~-------------------------- 142 (210)
T 1imj_A 92 FLAAVVDAL---ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI-------------------------- 142 (210)
T ss_dssp HHHHHHHHH---TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS--------------------------
T ss_pred HHHHHHHHh---CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc--------------------------
Confidence 888888888 67789999999999999999999998 999999998643110
Q ss_pred cccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHH
Q 022960 182 GKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELA 260 (289)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~ 260 (289)
..... .++++|+++++|++|. ++.+..+.+ +.+++++++.+++++|.++ +.++++.
T Consensus 143 -------------------~~~~~--~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~~~~~~~~ 199 (210)
T 1imj_A 143 -------------------NAANY--ASVKTPALIVYGDQDP-MGQTSFEHL-KQLPNHRVLIMKGAGHPCYLDKPEEWH 199 (210)
T ss_dssp -------------------CHHHH--HTCCSCEEEEEETTCH-HHHHHHHHH-TTSSSEEEEEETTCCTTHHHHCHHHHH
T ss_pred -------------------cchhh--hhCCCCEEEEEcCccc-CCHHHHHHH-hhCCCCCEEEecCCCcchhhcCHHHHH
Confidence 00001 1347899999999999 999999999 8889999999999999965 5677899
Q ss_pred HHHHHHHHhh
Q 022960 261 SLVIQFIKAN 270 (289)
Q Consensus 261 ~~i~~fl~~~ 270 (289)
+.|.+||++.
T Consensus 200 ~~i~~fl~~~ 209 (210)
T 1imj_A 200 TGLLDFLQGL 209 (210)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhc
Confidence 9999999753
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=207.99 Aligned_cols=235 Identities=10% Similarity=0.065 Sum_probs=162.1
Q ss_pred eeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccc----cchHHHHH
Q 022960 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY----GNYRREAE 102 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~----~~~~~~~~ 102 (289)
+...+|.++++... +++|+||++||++++... |..+++.|++. |+|+++|+||||.|...... .++.++++
T Consensus 13 ~~~~~g~~l~~~~~--g~~~~vv~lHG~~~~~~~--~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 87 (302)
T 1mj5_A 13 FIEIKGRRMAYIDE--GTGDPILFQHGNPTSSYL--WRNIMPHCAGL-GRLIACDLIGMGDSDKLDPSGPERYAYAEHRD 87 (302)
T ss_dssp EEEETTEEEEEEEE--SCSSEEEEECCTTCCGGG--GTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSSCHHHHHH
T ss_pred EEEECCEEEEEEEc--CCCCEEEEECCCCCchhh--hHHHHHHhccC-CeEEEEcCCCCCCCCCCCCCCcccccHHHHHH
Confidence 33457888886554 457999999999998854 88888888876 89999999999999876544 68889999
Q ss_pred HHHHHHHHHHhcCC-ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc--cccccccc---------------
Q 022960 103 DLRAIVQDFCAKGR-VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR--GIEGRLGL--------------- 163 (289)
Q Consensus 103 d~~~~i~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~~~~~~--------------- 163 (289)
|+.++++.+ +. ++++|+|||+||.+++.+|.++|+ |+++|++++...... ........
T Consensus 88 ~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (302)
T 1mj5_A 88 YLDALWEAL---DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVL 164 (302)
T ss_dssp HHHHHHHHT---TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHT
T ss_pred HHHHHHHHh---CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccchhhhhc
Confidence 999999988 66 789999999999999999999998 999999998654211 00000000
Q ss_pred ---hhHhhhhhcCcccccccc------cccccc-cChhhhhhhhcc---------------chhhhhcccccCceEEEEE
Q 022960 164 ---GYLQRIKQNGFIDVRNKK------GKLEYR-VTQESLMDRLST---------------DIHAACHMICQDCRVLTIH 218 (289)
Q Consensus 164 ---~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~---------------~~~~~~~~~~~~~P~l~i~ 218 (289)
.+...+............ ...... .........+.. +.... ..++++|+|+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~l~i~ 242 (302)
T 1mj5_A 165 QDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGW--LSESPIPKLFIN 242 (302)
T ss_dssp TTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHH--HTTCCSCEEEEE
T ss_pred ChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhh--hhccCCCeEEEE
Confidence 000000000000000000 000000 000111111100 11111 124689999999
Q ss_pred eCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcCC
Q 022960 219 GTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 219 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~~ 273 (289)
|++|.++|++..+.+.+.+++ +++++ ++||+++ ++++++++.|.+|+++....
T Consensus 243 g~~D~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 296 (302)
T 1mj5_A 243 AEPGALTTGRMRDFCRTWPNQ-TEITV-AGAHFIQEDSPDEIGAAIAAFVRRLRPA 296 (302)
T ss_dssp EEECSSSSHHHHHHHTTCSSE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHSCC
T ss_pred eCCCCCCChHHHHHHHHhcCC-ceEEe-cCcCcccccCHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999 99999 9999965 66789999999999976543
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=203.45 Aligned_cols=238 Identities=14% Similarity=0.175 Sum_probs=167.2
Q ss_pred cccceeeEEeeCCCCceEEEEEeec---CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHET---GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-- 92 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~---~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-- 92 (289)
..+..+++.+.+.+|.++.++++.| ++.|+||++||++++... |..+. .+.+.||.|+++|+||+|.+....
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~~--~~~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~ 154 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSGD--WNDKL-NYVAAGFTVVAMDVRGQGGQSQDVGG 154 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSCC--SGGGH-HHHTTTCEEEEECCTTSSSSCCCCCC
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCCC--hhhhh-HHHhCCcEEEEEcCCCCCCCCCCCcc
Confidence 4566788999999999999988755 357899999999998865 55555 555779999999999999887542
Q ss_pred ------------------cccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCC
Q 022960 93 ------------------LYGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRF 151 (289)
Q Consensus 93 ------------------~~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~ 151 (289)
....+....+|+.++++++... +.++++++|||+||.+++.++..+|+|+++|+++|..
T Consensus 155 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~v~~~vl~~p~~ 234 (346)
T 3fcy_A 155 VTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPRVRKVVSEYPFL 234 (346)
T ss_dssp CSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTCCEEEEESCSS
T ss_pred cCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCccccEEEECCCcc
Confidence 2234556679999999999776 3468999999999999999999999999999999865
Q ss_pred cccccccccc-cchhHhhhhhcCcccccccccccccccChhhhhhhh-ccchhhhhcccccCceEEEEEeCCCCccChhh
Q 022960 152 NLKRGIEGRL-GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL-STDIHAACHMICQDCRVLTIHGTKDKMVPAED 229 (289)
Q Consensus 152 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 229 (289)
.......... .......+.. +...... ...........+ ..+..... .++++|+|+++|++|.++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~d~~~~~--~~i~~P~lii~G~~D~~~~~~~ 305 (346)
T 3fcy_A 235 SDYKRVWDLDLAKNAYQEITD--YFRLFDP-----RHERENEVFTKLGYIDVKNLA--KRIKGDVLMCVGLMDQVCPPST 305 (346)
T ss_dssp CCHHHHHHTTCCCGGGHHHHH--HHHHHCT-----TCTTHHHHHHHHGGGCHHHHG--GGCCSEEEEEEETTCSSSCHHH
T ss_pred cCHHHHhhccccccchHHHHH--HHHhcCC-----CcchHHHHHHHhCcccHHHHH--HhcCCCEEEEeeCCCCcCCHHH
Confidence 4221111100 0000000000 0000000 000011111111 11111222 2458999999999999999999
Q ss_pred HHHHHhhCC-CcEEEEEcCCCcccccCchHHHHHHHHHHHhh
Q 022960 230 ALEFDKFIP-NHKLHIIEGADHEFTSHQDELASLVIQFIKAN 270 (289)
Q Consensus 230 ~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 270 (289)
++.+++.++ ++++++++++||.+. +++.+.+.+||++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 306 VFAAYNNIQSKKDIKVYPDYGHEPM---RGFGDLAMQFMLEL 344 (346)
T ss_dssp HHHHHTTCCSSEEEEEETTCCSSCC---TTHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCcEEEEeCCCCCcCH---HHHHHHHHHHHHHh
Confidence 999999987 689999999999986 67889999999864
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=204.95 Aligned_cols=215 Identities=17% Similarity=0.217 Sum_probs=140.9
Q ss_pred cCCCc-EEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEE
Q 022960 42 TGSKQ-LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITA 120 (289)
Q Consensus 42 ~~~~~-~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 120 (289)
.|++| +|||+||++++.. .|..+.+.|++ +|+|+++|+||||.|... ...+++.+++++.+ .+ + ++++
T Consensus 9 ~G~g~~~vvllHG~~~~~~--~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~-~~~~~~~~~~~l~~---~l---~-~~~~ 77 (258)
T 1m33_A 9 KGQGNVHLVLLHGWGLNAE--VWRCIDEELSS-HFTLHLVDLPGFGRSRGF-GALSLADMAEAVLQ---QA---P-DKAI 77 (258)
T ss_dssp ECCCSSEEEEECCTTCCGG--GGGGTHHHHHT-TSEEEEECCTTSTTCCSC-CCCCHHHHHHHHHT---TS---C-SSEE
T ss_pred ecCCCCeEEEECCCCCChH--HHHHHHHHhhc-CcEEEEeeCCCCCCCCCC-CCcCHHHHHHHHHH---Hh---C-CCeE
Confidence 34567 9999999999885 48889999975 699999999999999876 44566665555433 22 3 6899
Q ss_pred EEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc-cccccc----chhHhhhhh------cCccccccccccc---c
Q 022960 121 IIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG-IEGRLG----LGYLQRIKQ------NGFIDVRNKKGKL---E 185 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-~~~~~~----~~~~~~~~~------~~~~~~~~~~~~~---~ 185 (289)
|+||||||.+|+.+|.++|+ |+++|++++....... ...... ..+...+.. ..+.......... .
T Consensus 78 lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 1m33_A 78 WLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQD 157 (258)
T ss_dssp EEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHHH
T ss_pred EEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCccchhh
Confidence 99999999999999999999 9999999875322110 000000 001000000 0000000000000 0
Q ss_pred c-----------ccChhhhhhhh----ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCc
Q 022960 186 Y-----------RVTQESLMDRL----STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH 250 (289)
Q Consensus 186 ~-----------~~~~~~~~~~~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 250 (289)
. ......+...+ ..+... ...++++|+++++|++|.++|.+..+.+.+.++++++++++++||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH 235 (258)
T 1m33_A 158 ARALKKTVLALPMPEVDVLNGGLEILKTVDLRQ--PLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAH 235 (258)
T ss_dssp HHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTT--GGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCTTCEEEEETTCCS
T ss_pred HHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHH--HHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCccceEEEeCCCCC
Confidence 0 00000010000 001111 112468999999999999999999999999999999999999999
Q ss_pred ccc-cCchHHHHHHHHHHHh
Q 022960 251 EFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 251 ~~~-~~~~~~~~~i~~fl~~ 269 (289)
+++ ++++++++.|.+|+++
T Consensus 236 ~~~~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 236 APFISHPAEFCHLLVALKQR 255 (258)
T ss_dssp CHHHHSHHHHHHHHHHHHTT
T ss_pred CccccCHHHHHHHHHHHHHh
Confidence 965 7788999999999964
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-31 Score=205.44 Aligned_cols=232 Identities=13% Similarity=0.061 Sum_probs=152.8
Q ss_pred CCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHH-----HHHHHHHcCccEEEEccccCCCCCCCc-cc---cchH
Q 022960 30 SHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVN-----LAAALEREGISAFRFDFSGNGESEGSF-LY---GNYR 98 (289)
Q Consensus 30 ~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~-----~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~---~~~~ 98 (289)
.+|.+++|...+++ ++|+|||+||++++... +|.. +++.|++ +|+|+++|+||||.|.... .. .++.
T Consensus 18 ~~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~-~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~~ 95 (286)
T 2qmq_A 18 TPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKS-CFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPLGYQYPSLD 95 (286)
T ss_dssp ETTEEEEEEEESCCCTTCCEEEEECCTTCCHHH-HHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCTTCCCCCHH
T ss_pred cCCeEEEEEeccCCCCCCCeEEEeCCCCCCchh-hhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCCCCCccCHH
Confidence 35778887766654 58999999999998742 2554 7788877 5999999999999876432 22 3788
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc-------chhHhhhh
Q 022960 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG-------LGYLQRIK 170 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~ 170 (289)
.+++|+.++++.+ +.++++|+|||+||.+++.+|..+|+ |+++|++++........ .... ........
T Consensus 96 ~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 171 (286)
T 2qmq_A 96 QLADMIPCILQYL---NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWM-DWAAHKLTGLTSSIPDMIL 171 (286)
T ss_dssp HHHHTHHHHHHHH---TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHH-HHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHHHHh---CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchh-hhhhhhhccccccchHHHH
Confidence 9999999999988 67789999999999999999999998 99999999865332111 0000 00000000
Q ss_pred hcCccccccccccccc---------ccCh---hhhhhhhc--cchhh-hhcccccCceEEEEEeCCCCccChhhHHHHHh
Q 022960 171 QNGFIDVRNKKGKLEY---------RVTQ---ESLMDRLS--TDIHA-ACHMICQDCRVLTIHGTKDKMVPAEDALEFDK 235 (289)
Q Consensus 171 ~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~--~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 235 (289)
...+............ .... ..+...+. ..... .....++++|+|+++|++|.++| ...+.+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~~~ 250 (286)
T 2qmq_A 172 GHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-AVVECNSK 250 (286)
T ss_dssp HHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-HHHHHHHH
T ss_pred HHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-HHHHHHHH
Confidence 0000000000000000 0000 00110000 00000 01112568999999999999997 55666777
Q ss_pred hCC-CcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 236 FIP-NHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 236 ~~~-~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
..+ ++++++++++||.++ ++++++.+.|.+||+
T Consensus 251 ~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 251 LDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp SCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred hcCCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 777 899999999999965 677899999999985
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-31 Score=200.73 Aligned_cols=223 Identities=17% Similarity=0.136 Sum_probs=151.9
Q ss_pred CceEEEEEeecC-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHH--
Q 022960 32 GEKLVGILHETG-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV-- 108 (289)
Q Consensus 32 g~~l~~~~~~~~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i-- 108 (289)
|.++++...+++ ++|+||++||++++... |. +...|. +||+|+++|+||||.|. .....++.+.++|+.+++
T Consensus 2 g~~l~y~~~g~~~~~~~vv~~hG~~~~~~~--~~-~~~~l~-~g~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~ 76 (245)
T 3e0x_A 2 NAMLHYVHVGNKKSPNTLLFVHGSGCNLKI--FG-ELEKYL-EDYNCILLDLKGHGESK-GQCPSTVYGYIDNVANFITN 76 (245)
T ss_dssp CCCCCEEEEECTTCSCEEEEECCTTCCGGG--GT-TGGGGC-TTSEEEEECCTTSTTCC-SCCCSSHHHHHHHHHHHHHH
T ss_pred CceeEEEecCCCCCCCEEEEEeCCcccHHH--HH-HHHHHH-hCCEEEEecCCCCCCCC-CCCCcCHHHHHHHHHHHHHh
Confidence 456666666654 78999999999999865 66 777776 68999999999999998 334557788899999998
Q ss_pred ----HHHHhcCCceEEEEEeChhHHHHHHHHHh-CCCccEEEEeccCCccccccccc---ccc----hhHh-hhhhcCcc
Q 022960 109 ----QDFCAKGRVITAIIGHSKGGNAVLLYASK-YNDISIVINISGRFNLKRGIEGR---LGL----GYLQ-RIKQNGFI 175 (289)
Q Consensus 109 ----~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~-~p~v~~~v~~~~~~~~~~~~~~~---~~~----~~~~-~~~~~~~~ 175 (289)
+.+ + +++++|||+||.+++.++.+ +|+|+++|++++........... +.. .+.. ........
T Consensus 77 ~~~~~~~---~--~~~l~G~S~Gg~~a~~~a~~~~p~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (245)
T 3e0x_A 77 SEVTKHQ---K--NITLIGYSMGGAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDN 151 (245)
T ss_dssp CTTTTTC---S--CEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCS
T ss_pred hhhHhhc---C--ceEEEEeChhHHHHHHHHHHhCccccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccch
Confidence 544 3 89999999999999999999 88899999999876652111100 000 0000 00000000
Q ss_pred cccccccccccccChhhhhhhh----ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcc
Q 022960 176 DVRNKKGKLEYRVTQESLMDRL----STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE 251 (289)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 251 (289)
...... ..........+...+ ..+..... .++++|+++++|++|.++|.+..+.+.+.+++++++.++++||.
T Consensus 152 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 228 (245)
T 3e0x_A 152 PLSEKY-FETLEKDPDIMINDLIACKLIDLVDNL--KNIDIPVKAIVAKDELLTLVEYSEIIKKEVENSELKIFETGKHF 228 (245)
T ss_dssp HHHHHH-HTTSCSSHHHHHHHHHHHHHCBCGGGG--GGCCSCEEEEEETTCSSSCHHHHHHHHHHSSSEEEEEESSCGGG
T ss_pred HHHHHH-HHHHhcCcHHHHHHHHHhccccHHHHH--HhCCCCEEEEEeCCCCCCCHHHHHHHHHHcCCceEEEeCCCCcc
Confidence 000000 000000111111111 11111122 24589999999999999999999999999999999999999999
Q ss_pred cc-cCchHHHHHHHHHH
Q 022960 252 FT-SHQDELASLVIQFI 267 (289)
Q Consensus 252 ~~-~~~~~~~~~i~~fl 267 (289)
++ ++++++.+.|.+||
T Consensus 229 ~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 229 LLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp HHHHTHHHHHHHHHTTC
T ss_pred eEEecHHHHHHHHHhhC
Confidence 65 66778888888874
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=204.95 Aligned_cols=231 Identities=17% Similarity=0.150 Sum_probs=162.1
Q ss_pred cceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCC-CCcccc
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESE-GSFLYG 95 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~-~~~~~~ 95 (289)
...+.+.++. +|.++.++++.|. +.|+||++||++++... +......|+++||.|+++|+||+|.+. ......
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~--~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~~~ 201 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEE--SFQMENLVLDRGMATATFDGPGQGEMFEYKRIAG 201 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTTT--THHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCS
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHH--HHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCc
Confidence 4567778876 8999998877543 56899999999988864 444588889999999999999999983 222233
Q ss_pred chHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhh
Q 022960 96 NYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQ 171 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
++. +++.++++++..+ +.++++|+|||+||.+++.++.. |+ ++++|++ |..+...... ... ........
T Consensus 202 ~~~---~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~-~~~-~~~~~~~~ 274 (386)
T 2jbw_A 202 DYE---KYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD-LET-PLTKESWK 274 (386)
T ss_dssp CHH---HHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG-GSC-HHHHHHHH
T ss_pred cHH---HHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH-hcc-HHHHHHHH
Confidence 443 4455556666553 56799999999999999999999 66 9999999 8766543221 110 00000000
Q ss_pred cCcccccccccccccccChhhhh-hhh-ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC-C-CcEEEEEcC
Q 022960 172 NGFIDVRNKKGKLEYRVTQESLM-DRL-STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI-P-NHKLHIIEG 247 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~ 247 (289)
..+ +. ....... ..+ ..+..... .++++|+|+++|++|. +|++.++.+.+.+ + +++++++++
T Consensus 275 ~~~-------g~----~~~~~~~~~~~~~~~~~~~~--~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~~~~~~~~~~ 340 (386)
T 2jbw_A 275 YVS-------KV----DTLEEARLHVHAALETRDVL--SQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKD 340 (386)
T ss_dssp HHT-------TC----SSHHHHHHHHHHHTCCTTTG--GGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETT
T ss_pred HHh-------CC----CCHHHHHHHHHHhCChhhhh--cccCCCEEEEECCCCC-CCHHHHHHHHHHhcCCCcEEEEeCC
Confidence 000 00 0011111 111 11111112 2458999999999999 9999999999999 7 799999999
Q ss_pred CCcccccCchHHHHHHHHHHHhhcCCC
Q 022960 248 ADHEFTSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 248 ~gH~~~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
+||.+...++++.+.|.+||++++...
T Consensus 341 ~gH~~~~~~~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 341 GDHCCHNLGIRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp CCGGGGGGTTHHHHHHHHHHHHHHTSS
T ss_pred CCcCCccchHHHHHHHHHHHHHhcCCc
Confidence 999887778899999999999988754
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-29 Score=191.77 Aligned_cols=208 Identities=16% Similarity=0.223 Sum_probs=158.5
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY 94 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~ 94 (289)
++..+.+.++. +|.++.++++.|. +.|+||++||+++... .|..+++.|+++||.|+++|++|+|.+......
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~ 79 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNADGPLPIVIVVQEIFGVHE--HIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHD 79 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTCCSCEEEEEEECCTTCSCH--HHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCS
T ss_pred cceeeeEEEec-CCcceEEEEecCCCCCCCCCEEEEEcCcCccCH--HHHHHHHHHHHCCcEEEEecccccCCCCCchhh
Confidence 46677888887 7888888877553 3589999999998874 489999999999999999999999876543321
Q ss_pred -----------cchHHHHHHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccc
Q 022960 95 -----------GNYRREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRL 161 (289)
Q Consensus 95 -----------~~~~~~~~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~ 161 (289)
..+....+|+.++++++.+.. .++++++|||+||.+++.++..+|+++++|++.+.........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~v~~~~~~~~~~~~~--- 156 (241)
T 3f67_A 80 IPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGEKSLN--- 156 (241)
T ss_dssp HHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTTCCEEEEESCCCSCCCCSS---
T ss_pred HHHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcCcceEEEEeccccCCCccC---
Confidence 123466899999999998774 5689999999999999999999999888888766533211000
Q ss_pred cchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----
Q 022960 162 GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI---- 237 (289)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---- 237 (289)
.. .+...... ++++|+|+++|++|.++|++..+.+.+.+
T Consensus 157 ------------------------~~-----------~~~~~~~~--~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 199 (241)
T 3f67_A 157 ------------------------SP-----------KHPVDIAV--DLNAPVLGLYGAKDASIPQDTVETMRQALRAAN 199 (241)
T ss_dssp ------------------------SC-----------CCHHHHGG--GCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTT
T ss_pred ------------------------Cc-----------cCHHHhhh--hcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcC
Confidence 00 00011111 34789999999999999999888888776
Q ss_pred CCcEEEEEcCCCcccccC---------chHHHHHHHHHHHh
Q 022960 238 PNHKLHIIEGADHEFTSH---------QDELASLVIQFIKA 269 (289)
Q Consensus 238 ~~~~~~~~~~~gH~~~~~---------~~~~~~~i~~fl~~ 269 (289)
++++++++++++|.+..+ .++..+.+.+||++
T Consensus 200 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 200 ATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp CSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 678999999999987521 24678888888865
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=8e-30 Score=206.17 Aligned_cols=236 Identities=12% Similarity=0.113 Sum_probs=156.1
Q ss_pred CCceEEEEEeecC---CCcEEEEEcCCCCCCCCc-----------chHHHHH---HHHHcCccEEEEcccc--CCCCCCC
Q 022960 31 HGEKLVGILHETG---SKQLVIVCHGFQSTKDRI-----------PMVNLAA---ALEREGISAFRFDFSG--NGESEGS 91 (289)
Q Consensus 31 ~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~-----------~~~~~~~---~l~~~G~~v~~~d~~G--~G~s~~~ 91 (289)
+|.++++...++. .+|+|||+||++++...+ .|..+++ .|.+.||+|+++|+|| ||.|...
T Consensus 29 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~ 108 (366)
T 2pl5_A 29 SPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPL 108 (366)
T ss_dssp SSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTT
T ss_pred cCceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCC
Confidence 3457776666554 368999999999988621 3776664 4545689999999999 8888643
Q ss_pred c---c----------ccchHHHHHHHHHHHHHHHhcCCceE-EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc
Q 022960 92 F---L----------YGNYRREAEDLRAIVQDFCAKGRVIT-AIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG 156 (289)
Q Consensus 92 ~---~----------~~~~~~~~~d~~~~i~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~ 156 (289)
. . ..++.++++|+.++++.+ +.+++ +|+||||||.+|+.+|.++|+ |+++|++++.......
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 185 (366)
T 2pl5_A 109 SIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL---GIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAM 185 (366)
T ss_dssp SBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT---TCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHH
T ss_pred CCCCCCCccccCCCCcccHHHHHHHHHHHHHHc---CCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCc
Confidence 2 1 247888999999999887 77788 899999999999999999998 9999999987654211
Q ss_pred ccccc---------------------------------------cchhHhhhhhcCcccc-----ccccc--------cc
Q 022960 157 IEGRL---------------------------------------GLGYLQRIKQNGFIDV-----RNKKG--------KL 184 (289)
Q Consensus 157 ~~~~~---------------------------------------~~~~~~~~~~~~~~~~-----~~~~~--------~~ 184 (289)
..... ................ ..... ..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (366)
T 2pl5_A 186 QIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESF 265 (366)
T ss_dssp HHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCS
T ss_pred cchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhh
Confidence 10000 0000000000000000 00000 00
Q ss_pred ccccChhhhhhhhc----cchh----hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEE-cCCCcc
Q 022960 185 EYRVTQESLMDRLS----TDIH----AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHII-EGADHE 251 (289)
Q Consensus 185 ~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~-~~~gH~ 251 (289)
........+..... .+.. ......++++|+|+++|++|.++|++.++.+.+.++ +++++++ +++||.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 345 (366)
T 2pl5_A 266 VDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHD 345 (366)
T ss_dssp SSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSG
T ss_pred hcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCCcc
Confidence 00001111111000 0000 001222468999999999999999999999999998 8999999 899999
Q ss_pred cc-cCchHHHHHHHHHHHh
Q 022960 252 FT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 252 ~~-~~~~~~~~~i~~fl~~ 269 (289)
++ ++++++.+.|.+||++
T Consensus 346 ~~~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 346 SFLLKNPKQIEILKGFLEN 364 (366)
T ss_dssp GGGSCCHHHHHHHHHHHHC
T ss_pred hhhcChhHHHHHHHHHHcc
Confidence 66 6678999999999975
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=209.87 Aligned_cols=246 Identities=16% Similarity=0.132 Sum_probs=156.1
Q ss_pred eEEeeCCCCceE----EEEEeecC---CCcEEEEEcCCCCCCCC-----------cchHHHH---HHHHHcCccEEEEcc
Q 022960 24 RVVIPNSHGEKL----VGILHETG---SKQLVIVCHGFQSTKDR-----------IPMVNLA---AALEREGISAFRFDF 82 (289)
Q Consensus 24 ~~~~~~~~g~~l----~~~~~~~~---~~~~iv~~hG~~~~~~~-----------~~~~~~~---~~l~~~G~~v~~~d~ 82 (289)
...+...+|..+ +|..+++. ++|+||++||++++... .+|..++ +.|...||+|+++|+
T Consensus 14 ~~~~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~ 93 (377)
T 3i1i_A 14 LKEYTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDN 93 (377)
T ss_dssp EEEEECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECC
T ss_pred ecceeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecc
Confidence 334555666555 44444432 45899999999998643 1266666 667677999999999
Q ss_pred ccCCCCCC-------Cc--------------cccchHHHHHHHHHHHHHHHhcCCceEE-EEEeChhHHHHHHHHHhCCC
Q 022960 83 SGNGESEG-------SF--------------LYGNYRREAEDLRAIVQDFCAKGRVITA-IIGHSKGGNAVLLYASKYND 140 (289)
Q Consensus 83 ~G~G~s~~-------~~--------------~~~~~~~~~~d~~~~i~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~ 140 (289)
||||.|.+ +. ...++.++++|+.++++.+ +.++++ |+||||||.+|+.+|.++|+
T Consensus 94 ~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l---~~~~~~ilvGhS~Gg~ia~~~a~~~p~ 170 (377)
T 3i1i_A 94 LCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDM---GIARLHAVMGPSAGGMIAQQWAVHYPH 170 (377)
T ss_dssp TTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT---TCCCBSEEEEETHHHHHHHHHHHHCTT
T ss_pred cccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHc---CCCcEeeEEeeCHhHHHHHHHHHHChH
Confidence 99977431 11 1346788899999999887 777885 99999999999999999999
Q ss_pred -ccEEEE-eccCCcccccccccc---------cchh-------------H---hhhh----------hcCccccccccc-
Q 022960 141 -ISIVIN-ISGRFNLKRGIEGRL---------GLGY-------------L---QRIK----------QNGFIDVRNKKG- 182 (289)
Q Consensus 141 -v~~~v~-~~~~~~~~~~~~~~~---------~~~~-------------~---~~~~----------~~~~~~~~~~~~- 182 (289)
|+++|+ +++............ ...+ . .... ...+........
T Consensus 171 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (377)
T 3i1i_A 171 MVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEP 250 (377)
T ss_dssp TBSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGG
T ss_pred HHHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccc
Confidence 999999 666543111000000 0000 0 0000 000000000000
Q ss_pred --cc-----------------ccccChhhhhhhhc----cchh-----hhhcccccCceEEEEEeCCCCccChhhHHHHH
Q 022960 183 --KL-----------------EYRVTQESLMDRLS----TDIH-----AACHMICQDCRVLTIHGTKDKMVPAEDALEFD 234 (289)
Q Consensus 183 --~~-----------------~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 234 (289)
.. ........+..... .+.. ......++++|+|+|+|++|.++|++.++.++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~ 330 (377)
T 3i1i_A 251 YEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMV 330 (377)
T ss_dssp GTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHH
T ss_pred cccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHH
Confidence 00 00000000000000 0000 00111246899999999999999999999999
Q ss_pred hhC----CCcEEEEEcC-CCcccc-cCchHHHHHHHHHHHhhcC
Q 022960 235 KFI----PNHKLHIIEG-ADHEFT-SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 235 ~~~----~~~~~~~~~~-~gH~~~-~~~~~~~~~i~~fl~~~~~ 272 (289)
+.+ ++++++++++ +||+.+ ++++++++.|.+||++.+.
T Consensus 331 ~~~~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 331 DLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKVS 374 (377)
T ss_dssp HHHHHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCCS
T ss_pred HHHHhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhhh
Confidence 999 9999999998 999955 7789999999999987653
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=182.69 Aligned_cols=173 Identities=17% Similarity=0.250 Sum_probs=139.2
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIG 123 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G 123 (289)
++|+||++||++++...+.+..+.+.|.++||.|+++|+||+|.|.......++.+.++++.+.++... +.++++++|
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G 80 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARAAT--EKGPVVLAG 80 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHHHH--TTSCEEEEE
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCCEEEEE
Confidence 578999999999887653455899999999999999999999998755444445555555555554442 356899999
Q ss_pred eChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhh
Q 022960 124 HSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHA 203 (289)
Q Consensus 124 ~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (289)
||+||.+++.++.++| ++++|+++|.........
T Consensus 81 ~S~Gg~~a~~~a~~~~-~~~~v~~~~~~~~~~~~~--------------------------------------------- 114 (176)
T 2qjw_A 81 SSLGSYIAAQVSLQVP-TRALFLMVPPTKMGPLPA--------------------------------------------- 114 (176)
T ss_dssp ETHHHHHHHHHHTTSC-CSEEEEESCCSCBTTBCC---------------------------------------------
T ss_pred ECHHHHHHHHHHHhcC-hhheEEECCcCCccccCc---------------------------------------------
Confidence 9999999999999999 999999998765421000
Q ss_pred hhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHh
Q 022960 204 ACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 204 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
...+++|+++++|++|.++|.+..+.+.+.+ +++++++ +++|.+.++.+++.+.+.+||++
T Consensus 115 ---~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~-~~~H~~~~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 115 ---LDAAAVPISIVHAWHDELIPAADVIAWAQAR-SARLLLV-DDGHRLGAHVQAASRAFAELLQS 175 (176)
T ss_dssp ---CCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-TCEEEEE-SSCTTCTTCHHHHHHHHHHHHHT
T ss_pred ---ccccCCCEEEEEcCCCCccCHHHHHHHHHhC-CceEEEe-CCCccccccHHHHHHHHHHHHHh
Confidence 1234899999999999999999999998887 7899999 89999877778899999999975
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=199.42 Aligned_cols=220 Identities=14% Similarity=0.162 Sum_probs=151.1
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
++++|+|||+||++++.. .|..+++.|++. |.|+++|+||||.|.......++.+.++|+.++++.+ +.++++|
T Consensus 17 ~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~l 90 (267)
T 3fla_A 17 PDARARLVCLPHAGGSAS--FFFPLAKALAPA-VEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPF---GDRPLAL 90 (267)
T ss_dssp TTCSEEEEEECCTTCCGG--GGHHHHHHHTTT-EEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGG---TTSCEEE
T ss_pred CCCCceEEEeCCCCCCch--hHHHHHHHhccC-cEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhc---CCCceEE
Confidence 347889999999999875 489999999875 9999999999999987776778888899998888877 6778999
Q ss_pred EEeChhHHHHHHHHHhCCC-----ccEEEEeccCCcccccc---cccccchhHhhhhhcCcccccccccccccccChhhh
Q 022960 122 IGHSKGGNAVLLYASKYND-----ISIVINISGRFNLKRGI---EGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESL 193 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (289)
+|||+||.+|+.++..+|+ +++++++++........ .......+...+............. .......
T Consensus 91 vG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 166 (267)
T 3fla_A 91 FGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLAD----PELLAMV 166 (267)
T ss_dssp EEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHS----HHHHHHH
T ss_pred EEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccC----HHHHHHH
Confidence 9999999999999999987 89999988754322111 0001111111111100000000000 0000000
Q ss_pred hhhhccchh-----hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEcCCCcccc-cCchHHHHHHHHH
Q 022960 194 MDRLSTDIH-----AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHEFT-SHQDELASLVIQF 266 (289)
Q Consensus 194 ~~~~~~~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~-~~~~~~~~~i~~f 266 (289)
...+..+.. .......+++|+++++|++|.++|.+..+.+.+.+++ ++++++++ ||+++ ++++++.+.|.+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~~~~~~~~i~~f 245 (267)
T 3fla_A 167 LPAIRSDYRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLPG-GHFFLVDQAAPMIATMTEK 245 (267)
T ss_dssp HHHHHHHHHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEESS-STTHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcccccccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEecC-CceeeccCHHHHHHHHHHH
Confidence 000000000 0000124689999999999999999999999999988 89999998 99965 6678999999999
Q ss_pred HHhhcC
Q 022960 267 IKANYQ 272 (289)
Q Consensus 267 l~~~~~ 272 (289)
|++...
T Consensus 246 l~~~~~ 251 (267)
T 3fla_A 246 LAGPAL 251 (267)
T ss_dssp TC----
T ss_pred hccccc
Confidence 987654
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-29 Score=191.74 Aligned_cols=171 Identities=18% Similarity=0.280 Sum_probs=141.2
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHh-------cC
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCA-------KG 115 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~-------~~ 115 (289)
+++|+||++||++++... |..+++.|+++||.|+++|+||+|.+. .....|+.++++++.+ .+
T Consensus 52 ~~~p~vv~~HG~~~~~~~--~~~~~~~l~~~G~~v~~~d~~g~g~~~--------~~~~~d~~~~~~~l~~~~~~~~~~~ 121 (262)
T 1jfr_A 52 GTFGAVVISPGFTAYQSS--IAWLGPRLASQGFVVFTIDTNTTLDQP--------DSRGRQLLSALDYLTQRSSVRTRVD 121 (262)
T ss_dssp CCEEEEEEECCTTCCGGG--TTTHHHHHHTTTCEEEEECCSSTTCCH--------HHHHHHHHHHHHHHHHTSTTGGGEE
T ss_pred CCCCEEEEeCCcCCCchh--HHHHHHHHHhCCCEEEEeCCCCCCCCC--------chhHHHHHHHHHHHHhccccccccC
Confidence 456899999999998854 888999999999999999999998653 2334677777777765 15
Q ss_pred CceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhh
Q 022960 116 RVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMD 195 (289)
Q Consensus 116 ~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (289)
.++++++|||+||.+++.++..+|+++++|+++|...
T Consensus 122 ~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~p~~~------------------------------------------- 158 (262)
T 1jfr_A 122 ATRLGVMGHSMGGGGSLEAAKSRTSLKAAIPLTGWNT------------------------------------------- 158 (262)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCTTCSEEEEESCCCS-------------------------------------------
T ss_pred cccEEEEEEChhHHHHHHHHhcCccceEEEeecccCc-------------------------------------------
Confidence 6689999999999999999999999999999987532
Q ss_pred hhccchhhhhcccccCceEEEEEeCCCCccChhh-HHHHHhhCCC---cEEEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 196 RLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED-ALEFDKFIPN---HKLHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 196 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~---~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
. ....++++|+|+++|++|.+++.+. ++.+.+.+++ .+++++++++|.++ +.++++.+.+.+||++.
T Consensus 159 ------~--~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 230 (262)
T 1jfr_A 159 ------D--KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRF 230 (262)
T ss_dssp ------C--CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHH
T ss_pred ------c--ccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCCCCcCCcccchHHHHHHHHHHHHHH
Confidence 0 0001347899999999999999998 9999998865 49999999999976 55689999999999998
Q ss_pred cCCC
Q 022960 271 YQKD 274 (289)
Q Consensus 271 ~~~~ 274 (289)
+...
T Consensus 231 l~~~ 234 (262)
T 1jfr_A 231 IDSD 234 (262)
T ss_dssp HSCC
T ss_pred hcCc
Confidence 8654
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=204.96 Aligned_cols=235 Identities=16% Similarity=0.145 Sum_probs=152.7
Q ss_pred eeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCC-CCccccchHHHH
Q 022960 23 RRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESE-GSFLYGNYRREA 101 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~-~~~~~~~~~~~~ 101 (289)
+...+.+. +..++++ ..+.+|+|||+||+|.......|..+++.|. +||+|+++|+||||.|+ ......++++++
T Consensus 22 ~~~~v~~~-~~~~~~~--~~~~~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 97 (292)
T 3l80_A 22 NKEMVNTL-LGPIYTC--HREGNPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSGYSPVSNQANVGLRDWV 97 (292)
T ss_dssp EEEEECCT-TSCEEEE--EECCSSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTSTTSCCCCCTTCCHHHHH
T ss_pred CcceEEec-CceEEEe--cCCCCCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCCCCCCCCCcccccHHHHH
Confidence 34455544 4466654 3345699999997654432245888998887 58999999999999998 454567889999
Q ss_pred HHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc--cccc-----------cccch---
Q 022960 102 EDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR--GIEG-----------RLGLG--- 164 (289)
Q Consensus 102 ~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~~-----------~~~~~--- 164 (289)
+|+.++++.+ +.++++|+||||||.+|+.+|.++|+ |+++|++++...... .... .....
T Consensus 98 ~~l~~~l~~~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (292)
T 3l80_A 98 NAILMIFEHF---KFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADR 174 (292)
T ss_dssp HHHHHHHHHS---CCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHH
T ss_pred HHHHHHHHHh---CCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCch
Confidence 9999999988 77799999999999999999999999 999999995432110 0000 00000
Q ss_pred --hHhhhhhcCcccccccccccccccChhhh------------hhhhccchhhhhcccccCceEEEEEeCCCCccChhhH
Q 022960 165 --YLQRIKQNGFIDVRNKKGKLEYRVTQESL------------MDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDA 230 (289)
Q Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 230 (289)
+........+..................+ ......+.. .....++|+|+++|++|..++++ +
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~l~~~~P~lii~g~~D~~~~~~-~ 250 (292)
T 3l80_A 175 LNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFK---TGISEKIPSIVFSESFREKEYLE-S 250 (292)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGC---CCCCTTSCEEEEECGGGHHHHHT-S
T ss_pred hhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhh---hccCCCCCEEEEEccCccccchH-H
Confidence 00000000000000000000000000000 000000000 11112799999999999999988 7
Q ss_pred HHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 231 LEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
.+.+.+++.+ ++++++||+++ ++++++++.|.+||+++
T Consensus 251 -~~~~~~~~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 251 -EYLNKHTQTK-LILCGQHHYLHWSETNSILEKVEQLLSNH 289 (292)
T ss_dssp -TTCCCCTTCE-EEECCSSSCHHHHCHHHHHHHHHHHHHTC
T ss_pred -HHhccCCCce-eeeCCCCCcchhhCHHHHHHHHHHHHHhc
Confidence 8888889999 99999999965 77889999999999864
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=198.14 Aligned_cols=231 Identities=14% Similarity=0.171 Sum_probs=148.6
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccc-----cchHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY-----GNYRREAEDL 104 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-----~~~~~~~~d~ 104 (289)
.+|.++++. ..|++++|||+||++++.. .|..+.+.|.+ +|+|+++|+||||.|..+... .+...+++|+
T Consensus 12 ~~~~~~~~~--~~g~g~~~vllHG~~~~~~--~w~~~~~~l~~-~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~ 86 (291)
T 3qyj_A 12 TTEARINLV--KAGHGAPLLLLHGYPQTHV--MWHKIAPLLAN-NFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQDQ 86 (291)
T ss_dssp CSSCEEEEE--EECCSSEEEEECCTTCCGG--GGTTTHHHHTT-TSEEEEECCTTSTTSCCCCCCGGGGGGSHHHHHHHH
T ss_pred cCCeEEEEE--EcCCCCeEEEECCCCCCHH--HHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccccccCHHHHHHHH
Confidence 468888854 4567889999999999885 48889998875 699999999999999865432 4667788899
Q ss_pred HHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc--ccccccc------------chhHhhh
Q 022960 105 RAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR--GIEGRLG------------LGYLQRI 169 (289)
Q Consensus 105 ~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~~~~~------------~~~~~~~ 169 (289)
.++++.+ +.++++++||||||.+|+.+|.++|+ |+++|++++...... ....... ......+
T Consensus 87 ~~~~~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
T 3qyj_A 87 VEVMSKL---GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDNLPETL 163 (291)
T ss_dssp HHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTCSTTHHHHH
T ss_pred HHHHHHc---CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhccCCCchHHH
Confidence 9888877 77789999999999999999999999 999999976422100 0000000 0000000
Q ss_pred hhcC---cc-cccccccccccccChhhhhh----------------hhcc----chh--hhhcccccCceEEEEEeCCCC
Q 022960 170 KQNG---FI-DVRNKKGKLEYRVTQESLMD----------------RLST----DIH--AACHMICQDCRVLTIHGTKDK 223 (289)
Q Consensus 170 ~~~~---~~-~~~~~~~~~~~~~~~~~~~~----------------~~~~----~~~--~~~~~~~~~~P~l~i~g~~D~ 223 (289)
.... +. ...............+.+.. .+.. +.. ......++++|+|+++|++|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lvi~G~~D~ 243 (291)
T 3qyj_A 164 IGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGEKGI 243 (291)
T ss_dssp HHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCEEEEEETTSS
T ss_pred HcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCCccccceEEEeccccc
Confidence 0000 00 00000000000001110000 0000 000 001123569999999999997
Q ss_pred ccCh-hhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 224 MVPA-EDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 224 ~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+.+. .....+.+..++.+...++ +||+++ +.++++++.|.+||+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 244 IGRKYDVLATWRERAIDVSGQSLP-CGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp HHHHSCHHHHHHTTBSSEEEEEES-SSSCHHHHSHHHHHHHHHHHHHC
T ss_pred ccchhhHHHHHHhhcCCcceeecc-CCCCchhhCHHHHHHHHHHHHhc
Confidence 6542 3445566666788888886 899976 7788999999999974
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-28 Score=194.77 Aligned_cols=236 Identities=16% Similarity=0.180 Sum_probs=164.1
Q ss_pred cccceeeEEeeCCCCceEEEEEeec---CCCcEEEEEcCCCCC-CCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHET---GSKQLVIVCHGFQST-KDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL 93 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~---~~~~~iv~~hG~~~~-~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 93 (289)
..+..+++.+++.+|.++.++++.| ++.|+||++||++++ ... |.... .|++.||.|+++|+||+|.|.....
T Consensus 52 ~~~~~~~~~~~~~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~~--~~~~~-~l~~~g~~v~~~d~rg~g~s~~~~~ 128 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDGE--IHEMV-NWALHGYATFGMLVRGQQRSEDTSI 128 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGGG--HHHHH-HHHHTTCEEEEECCTTTSSSCCCCC
T ss_pred CCeEEEEEEEEccCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCCC--ccccc-chhhCCcEEEEecCCCCCCCCCccc
Confidence 3456778888888898899887765 356899999999998 643 55554 7778899999999999999876521
Q ss_pred ------------------ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCc
Q 022960 94 ------------------YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFN 152 (289)
Q Consensus 94 ------------------~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~ 152 (289)
...+....+|+.++++++.+. +.++++++|||+||.+++.++..+|+++++|+.+|...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~~~v~~~p~~~ 208 (318)
T 1l7a_A 129 SPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLS 208 (318)
T ss_dssp CSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSCCSEEEEESCCSC
T ss_pred ccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCCccEEEecCCccc
Confidence 112466789999999999876 23689999999999999999999999999998887543
Q ss_pred cccccccccc-chh--HhhhhhcCcccccccccccccccChhhhhhhh-ccchhhhhcccccCceEEEEEeCCCCccChh
Q 022960 153 LKRGIEGRLG-LGY--LQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL-STDIHAACHMICQDCRVLTIHGTKDKMVPAE 228 (289)
Q Consensus 153 ~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 228 (289)
.......... ..+ ........ . ...........+ ..+...... ++++|+|+++|++|.++|++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~~--~~~~P~li~~g~~D~~~~~~ 275 (318)
T 1l7a_A 209 NFERAIDVALEQPYLEINSFFRRN--------G---SPETEVQAMKTLSYFDIMNLAD--RVKVPVLMSIGLIDKVTPPS 275 (318)
T ss_dssp CHHHHHHHCCSTTTTHHHHHHHHS--------C---CHHHHHHHHHHHHTTCHHHHGG--GCCSCEEEEEETTCSSSCHH
T ss_pred CHHHHHhcCCcCccHHHHHHHhcc--------C---CcccHHHHHHhhccccHHHHHh--hCCCCEEEEeccCCCCCCcc
Confidence 2111100000 000 00000000 0 000000000000 011111122 34899999999999999999
Q ss_pred hHHHHHhhCCC-cEEEEEcCCCcccccCchHHHHHHHHHHHhhcC
Q 022960 229 DALEFDKFIPN-HKLHIIEGADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 229 ~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
.++.+.+.+++ ++++++++++|.. ..+..+.+.+||++++.
T Consensus 276 ~~~~~~~~l~~~~~~~~~~~~~H~~---~~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 276 TVFAAYNHLETKKELKVYRYFGHEY---IPAFQTEKLAFFKQILK 317 (318)
T ss_dssp HHHHHHHHCCSSEEEEEETTCCSSC---CHHHHHHHHHHHHHHHC
T ss_pred cHHHHHhhcCCCeeEEEccCCCCCC---cchhHHHHHHHHHHHhC
Confidence 99999999875 8999999999993 46788999999998764
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-29 Score=189.64 Aligned_cols=210 Identities=18% Similarity=0.232 Sum_probs=150.3
Q ss_pred eCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcccc-----------c
Q 022960 28 PNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYG-----------N 96 (289)
Q Consensus 28 ~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~-----------~ 96 (289)
...+|..+.+ +.+.+++|+||++||++++... |..+++.|+++||.|+++|+||+|.|....... +
T Consensus 8 ~~~~g~~~~~-~~~~~~~~~vv~~hG~~~~~~~--~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~ 84 (238)
T 1ufo_A 8 LTLAGLSVLA-RIPEAPKALLLALHGLQGSKEH--ILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRV 84 (238)
T ss_dssp EEETTEEEEE-EEESSCCEEEEEECCTTCCHHH--HHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHH
T ss_pred cccCCEEEEE-EecCCCccEEEEECCCcccchH--HHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhHHHH
Confidence 3345655543 2344488999999999998854 888889999999999999999999987644322 3
Q ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcc
Q 022960 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFI 175 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (289)
+...++|+.++++++.+.+.++++++|||+||.+++.++..+|+ +++++++++....... ....
T Consensus 85 ~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------- 149 (238)
T 1ufo_A 85 ALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLP-QGQV-------------- 149 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCC-TTCC--------------
T ss_pred HHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhh-hhhc--------------
Confidence 56778899999999877655899999999999999999999998 8888887765332110 0000
Q ss_pred cccccccccccccChhhhhhhhccchhhhhccccc-CceEEEEEeCCCCccChhhHHHHHhhCC------CcEEEEEcCC
Q 022960 176 DVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQ-DCRVLTIHGTKDKMVPAEDALEFDKFIP------NHKLHIIEGA 248 (289)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~ 248 (289)
. .. .........+.... ..++ ++|+++++|++|.++|.+.++.+.+.++ ++++++++++
T Consensus 150 ~-----------~~-~~~~~~~~~~~~~~--~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (238)
T 1ufo_A 150 V-----------ED-PGVLALYQAPPATR--GEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGA 215 (238)
T ss_dssp C-----------CC-HHHHHHHHSCGGGC--GGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTC
T ss_pred c-----------CC-cccchhhcCChhhh--hhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCC
Confidence 0 00 00000000111111 1134 7899999999999999999999999888 8899999999
Q ss_pred CcccccCchHHHHHHHHHHHhhcC
Q 022960 249 DHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 249 gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
||.+.. +..+.+.+||.+.+.
T Consensus 216 ~H~~~~---~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 216 GHTLTP---LMARVGLAFLEHWLE 236 (238)
T ss_dssp CSSCCH---HHHHHHHHHHHHHHH
T ss_pred CcccHH---HHHHHHHHHHHHHHh
Confidence 999753 345566677766553
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-30 Score=207.48 Aligned_cols=236 Identities=14% Similarity=0.117 Sum_probs=154.4
Q ss_pred CCceEEEEEeecCC---CcEEEEEcCCCCCCCCc-------chHHHHH---HHHHcCccEEEEcccc-CCCCCCCcc---
Q 022960 31 HGEKLVGILHETGS---KQLVIVCHGFQSTKDRI-------PMVNLAA---ALEREGISAFRFDFSG-NGESEGSFL--- 93 (289)
Q Consensus 31 ~g~~l~~~~~~~~~---~~~iv~~hG~~~~~~~~-------~~~~~~~---~l~~~G~~v~~~d~~G-~G~s~~~~~--- 93 (289)
+|.++++...++.+ +|+|||+||++++.... +|..+++ .|++.||+|+++|+|| +|.|+.+..
T Consensus 42 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~ 121 (377)
T 2b61_A 42 SYINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINP 121 (377)
T ss_dssp CSEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCT
T ss_pred cceeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCc
Confidence 34566665555433 78999999999988530 1677764 3756789999999999 688765421
Q ss_pred -----------ccchHHHHHHHHHHHHHHHhcCCceEE-EEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc---
Q 022960 94 -----------YGNYRREAEDLRAIVQDFCAKGRVITA-IIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGI--- 157 (289)
Q Consensus 94 -----------~~~~~~~~~d~~~~i~~l~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~--- 157 (289)
..++.++++|+.++++.+ +.++++ |+||||||.+|+.+|.++|+ |+++|++++........
T Consensus 122 ~~g~~~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 198 (377)
T 2b61_A 122 QTGKPYGSQFPNIVVQDIVKVQKALLEHL---GISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGF 198 (377)
T ss_dssp TTSSBCGGGCCCCCHHHHHHHHHHHHHHT---TCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHH
T ss_pred cccccccccCCcccHHHHHHHHHHHHHHc---CCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhH
Confidence 357788899999999887 777887 99999999999999999999 99999999865432100
Q ss_pred cccccc--------------------------hhHhhhhh---cCccccccccccc----------------------cc
Q 022960 158 EGRLGL--------------------------GYLQRIKQ---NGFIDVRNKKGKL----------------------EY 186 (289)
Q Consensus 158 ~~~~~~--------------------------~~~~~~~~---~~~~~~~~~~~~~----------------------~~ 186 (289)
...... ........ ..+.......... ..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (377)
T 2b61_A 199 NHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLE 278 (377)
T ss_dssp HHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhhcc
Confidence 000000 00000000 0000000000000 00
Q ss_pred ccChhhhhhhhcc----ch-----hhhhcccccCceEEEEEeCCCCccCh----hhHHHHHhhCCCcEEEEEc-CCCccc
Q 022960 187 RVTQESLMDRLST----DI-----HAACHMICQDCRVLTIHGTKDKMVPA----EDALEFDKFIPNHKLHIIE-GADHEF 252 (289)
Q Consensus 187 ~~~~~~~~~~~~~----~~-----~~~~~~~~~~~P~l~i~g~~D~~~~~----~~~~~~~~~~~~~~~~~~~-~~gH~~ 252 (289)
......+...... +. .......++++|+|+++|++|.++|+ +..+.+.+.++++++++++ ++||++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~gH~~ 358 (377)
T 2b61_A 279 RFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDA 358 (377)
T ss_dssp TCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGH
T ss_pred ccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCceEEEeCCCCCchh
Confidence 0000000000000 00 00111224689999999999999999 8899999999999999999 999996
Q ss_pred c-cCchHHHHHHHHHHHh
Q 022960 253 T-SHQDELASLVIQFIKA 269 (289)
Q Consensus 253 ~-~~~~~~~~~i~~fl~~ 269 (289)
+ ++++++++.|.+||++
T Consensus 359 ~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 359 FLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp HHHCHHHHHHHHHHHHHT
T ss_pred hhcCHHHHHHHHHHHHhc
Confidence 5 6778999999999975
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-32 Score=215.47 Aligned_cols=234 Identities=16% Similarity=0.170 Sum_probs=156.0
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCC-----ccccchHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS-----FLYGNYRREAEDL 104 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~d~ 104 (289)
.+|.++++.. .+++|+||++||++++... |..+++.|+ +||+|+++|+||||.|..+ ....++.++++|+
T Consensus 12 ~~g~~~~~~~--~g~~p~vv~lHG~~~~~~~--~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~l 86 (304)
T 3b12_A 12 VGDVTINCVV--GGSGPALLLLHGFPQNLHM--WARVAPLLA-NEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQ 86 (304)
Confidence 4677777544 4478899999999998854 899999998 6899999999999999876 3456778889999
Q ss_pred HHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc------------------ccc--
Q 022960 105 RAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR------------------LGL-- 163 (289)
Q Consensus 105 ~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~------------------~~~-- 163 (289)
.++++.+ +.++++|+||||||.+++.+|.++|+ |+++|++++........... ...
T Consensus 87 ~~~l~~l---~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3b12_A 87 RELMRTL---GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKV 163 (304)
Confidence 9999988 66789999999999999999999998 99999999865422110000 000
Q ss_pred ------hhHhh-hhhcCcccc--ccccccccc--ccC----hhhhhhhhcc----chhhhh-c-ccccCceEEEEEeCCC
Q 022960 164 ------GYLQR-IKQNGFIDV--RNKKGKLEY--RVT----QESLMDRLST----DIHAAC-H-MICQDCRVLTIHGTKD 222 (289)
Q Consensus 164 ------~~~~~-~~~~~~~~~--~~~~~~~~~--~~~----~~~~~~~~~~----~~~~~~-~-~~~~~~P~l~i~g~~D 222 (289)
.+... +........ ........+ ... .......+.. +..... . ..++++|+|+++|++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D 243 (304)
T 3b12_A 164 IGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAG 243 (304)
Confidence 00000 000000000 000000000 000 0000000000 000000 0 2256899999999999
Q ss_pred C-ccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcC
Q 022960 223 K-MVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 223 ~-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~ 272 (289)
. +.+....+.+.+..++++++++ ++||+++ ++++++++.|.+||++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 244 LMHSLFEMQVVWAPRLANMRFASL-PGGHFFVDRFPDDTARILREFLSDARS 294 (304)
Confidence 5 4466777778888889999999 9999966 6678999999999987654
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-28 Score=195.44 Aligned_cols=246 Identities=17% Similarity=0.138 Sum_probs=163.0
Q ss_pred ccceeeEEeeCCCCceEEEEEeec-----CCCcEEEEEcCCCCCCCCcchH-HHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHET-----GSKQLVIVCHGFQSTKDRIPMV-NLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~-----~~~~~iv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
.+..+.+.+.+.||.++.++++.| ++.|+||++||++++... |. .+++.|+++||.|+++|+||+|.|.+..
T Consensus 65 ~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~ 142 (367)
T 2hdw_A 65 KVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQ--SSGLYAQTMAERGFVTLAFDPSYTGESGGQP 142 (367)
T ss_dssp TEEEEEEEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTS--HHHHHHHHHHHTTCEEEEECCTTSTTSCCSS
T ss_pred CceeEEEEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchh--hHHHHHHHHHHCCCEEEEECCCCcCCCCCcC
Confidence 456788899998999999876643 246799999999988764 55 4889999999999999999999998654
Q ss_pred cc-cchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccc----ccc--
Q 022960 93 LY-GNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEG----RLG-- 162 (289)
Q Consensus 93 ~~-~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~----~~~-- 162 (289)
.. ......++|+.++++++..+ +.++++++|||+||.+++.++..+|+++++|+++|.. ....... ...
T Consensus 143 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~v~~~p~~-~~~~~~~~~~~~~~~~ 221 (367)
T 2hdw_A 143 RNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKRVKAVVTSTMYD-MTRVMSKGYNDSVTLE 221 (367)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCC-HHHHHHHTTTTCCCHH
T ss_pred ccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCCCccEEEEecccc-ccHHHhhhhccccchH
Confidence 32 33567789999999999876 3568999999999999999999999999999998752 1110000 000
Q ss_pred --chhHh--------hhhhcCccc---cc---ccccc---------------------cccccChhhhhhhhccchhhhh
Q 022960 163 --LGYLQ--------RIKQNGFID---VR---NKKGK---------------------LEYRVTQESLMDRLSTDIHAAC 205 (289)
Q Consensus 163 --~~~~~--------~~~~~~~~~---~~---~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~ 205 (289)
..... .+....+.. .. ..... ....+...........+.....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (367)
T 2hdw_A 222 QRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYI 301 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTG
T ss_pred HHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhH
Confidence 00000 000000000 00 00000 0000000000000011111111
Q ss_pred cccccC-ceEEEEEeCCCCccChhhHHHHHhh-CCCcEEEEEcCCCcccc-cCchH-HHHHHHHHHHhhc
Q 022960 206 HMICQD-CRVLTIHGTKDKMVPAEDALEFDKF-IPNHKLHIIEGADHEFT-SHQDE-LASLVIQFIKANY 271 (289)
Q Consensus 206 ~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~-~~~~~-~~~~i~~fl~~~~ 271 (289)
.+++ +|+|+++|++|. +.+.++.+++. .+++++++++++||..+ +.++. +.+.+.+||++++
T Consensus 302 --~~i~~~PvLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 302 --KEISPRPILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp --GGGTTSCEEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred --HhhcCCceEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 2457 999999999998 78888888774 46789999999999854 44443 6899999998763
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-30 Score=196.70 Aligned_cols=213 Identities=17% Similarity=0.211 Sum_probs=133.3
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCce--EEEE
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVI--TAII 122 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~--~~l~ 122 (289)
+|+|||+||++++... |..+++.|++.||+|+++|+||||.|.... ..++.++++|+.++++.+ +.++ ++|+
T Consensus 16 ~~~vvllHG~~~~~~~--w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~-~~~~~~~a~~l~~~l~~l---~~~~~p~~lv 89 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGAD--WQPVLSHLARTQCAALTLDLPGHGTNPERH-CDNFAEAVEMIEQTVQAH---VTSEVPVILV 89 (264)
T ss_dssp BCEEEEECCTTCCGGG--GHHHHHHHTTSSCEEEEECCTTCSSCC--------CHHHHHHHHHHHTT---CCTTSEEEEE
T ss_pred CCcEEEEcCCCCCHHH--HHHHHHHhcccCceEEEecCCCCCCCCCCC-ccCHHHHHHHHHHHHHHh---CcCCCceEEE
Confidence 4899999999999854 999999998568999999999999998643 246778888888888876 5555 9999
Q ss_pred EeChhHHHHHH---HHHhCCC-ccEEEEeccCCcccccccccc----cchhHhhhhhcCcc----cc-----ccccccc-
Q 022960 123 GHSKGGNAVLL---YASKYND-ISIVINISGRFNLKRGIEGRL----GLGYLQRIKQNGFI----DV-----RNKKGKL- 184 (289)
Q Consensus 123 G~S~Gg~~a~~---~a~~~p~-v~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~-----~~~~~~~- 184 (289)
||||||.+++. +|.++|+ |+++|++++............ ...+...+...... .. .......
T Consensus 90 GhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
T 1r3d_A 90 GYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQ 169 (264)
T ss_dssp EETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGGGTTCCHHH
T ss_pred EECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhhhhhhhccCHHH
Confidence 99999999999 8888999 999999987543221110000 00000000000000 00 0000000
Q ss_pred --c-----cccChhhhhhhhc-------cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCc
Q 022960 185 --E-----YRVTQESLMDRLS-------TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH 250 (289)
Q Consensus 185 --~-----~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 250 (289)
. ...........+. .+.... ..++++|+|+++|++|..++ . +.+.++ .++++++++||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~lii~G~~D~~~~-~----~~~~~~-~~~~~i~~~gH 241 (264)
T 1r3d_A 170 RQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPA--LQALKLPIHYVCGEQDSKFQ-Q----LAESSG-LSYSQVAQAGH 241 (264)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHH--HHTCSSCEEEEEETTCHHHH-H----HHHHHC-SEEEEETTCCS
T ss_pred HHHHHHHHhhcchHHHHHHHHhhhhccCccHHHH--HHhcCCCEEEEEECCCchHH-H----HHHHhC-CcEEEcCCCCC
Confidence 0 0000000000000 011111 12468999999999998652 2 223233 78999999999
Q ss_pred ccc-cCchHHHHHHHHHHHhhc
Q 022960 251 EFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 251 ~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
+++ ++++++++.|.+|++++.
T Consensus 242 ~~~~e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 242 NVHHEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp CHHHHCHHHHHHHHHHHHHHHC
T ss_pred chhhcCHHHHHHHHHHHHHHhc
Confidence 966 678899999999998754
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=191.86 Aligned_cols=184 Identities=17% Similarity=0.214 Sum_probs=147.4
Q ss_pred CCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI 107 (289)
Q Consensus 30 ~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~ 107 (289)
.+|......+++.+ +.|+||++||++++... |..+.+.|+++||.|+++|+||+|.+.. ...+|+.++
T Consensus 79 ~~g~~~~~~~~p~~~~~~p~vv~~HG~~~~~~~--~~~~~~~la~~G~~vv~~d~~g~g~s~~--------~~~~d~~~~ 148 (306)
T 3vis_A 79 ADGFGGGTIYYPRENNTYGAIAISPGYTGTQSS--IAWLGERIASHGFVVIAIDTNTTLDQPD--------SRARQLNAA 148 (306)
T ss_dssp CSSSCCEEEEEESSCSCEEEEEEECCTTCCHHH--HHHHHHHHHTTTEEEEEECCSSTTCCHH--------HHHHHHHHH
T ss_pred cCCCcceEEEeeCCCCCCCEEEEeCCCcCCHHH--HHHHHHHHHhCCCEEEEecCCCCCCCcc--------hHHHHHHHH
Confidence 55655333334332 46899999999998854 8999999999999999999999998752 334677777
Q ss_pred HHHHHhc---------CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCccccc
Q 022960 108 VQDFCAK---------GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVR 178 (289)
Q Consensus 108 i~~l~~~---------~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (289)
++++... +.++++++|||+||.+++.++..+|+++++|+++|....
T Consensus 149 ~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~v~~~v~~~~~~~~------------------------- 203 (306)
T 3vis_A 149 LDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPDLKAAIPLTPWHLN------------------------- 203 (306)
T ss_dssp HHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTTCSEEEEESCCCSC-------------------------
T ss_pred HHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCCeeEEEEeccccCc-------------------------
Confidence 7777664 456899999999999999999999999999999885430
Q ss_pred ccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChh-hHHHHHhhCCC---cEEEEEcCCCcccc-
Q 022960 179 NKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAE-DALEFDKFIPN---HKLHIIEGADHEFT- 253 (289)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~---~~~~~~~~~gH~~~- 253 (289)
....++++|+|+++|++|.++|.+ ..+.+.+.+++ .++++++++||.++
T Consensus 204 --------------------------~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH~~~~ 257 (306)
T 3vis_A 204 --------------------------KSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASHFAPN 257 (306)
T ss_dssp --------------------------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCTTGGG
T ss_pred --------------------------cccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCccchh
Confidence 000134789999999999999998 69999998875 57999999999976
Q ss_pred cCchHHHHHHHHHHHhhcCCC
Q 022960 254 SHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 254 ~~~~~~~~~i~~fl~~~~~~~ 274 (289)
+.++++.+.+.+||++++...
T Consensus 258 ~~~~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 258 ITNKTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp SCCHHHHHHHHHHHHHHHSCC
T ss_pred hchhHHHHHHHHHHHHHccCc
Confidence 557889999999999988654
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=208.07 Aligned_cols=235 Identities=16% Similarity=0.197 Sum_probs=153.5
Q ss_pred CceEEEEEeecC---CCcEEEEEcCCCCCCCCc-chHHHHH---HHHHcCccEEEEcccc--CCCCCCCc----------
Q 022960 32 GEKLVGILHETG---SKQLVIVCHGFQSTKDRI-PMVNLAA---ALEREGISAFRFDFSG--NGESEGSF---------- 92 (289)
Q Consensus 32 g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~-~~~~~~~---~l~~~G~~v~~~d~~G--~G~s~~~~---------- 92 (289)
|.+++|..+++. .+|+||++||++++...+ +|..++. .|...||+|+++|+|| ||.|....
T Consensus 93 g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~ 172 (444)
T 2vat_A 93 DVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRP 172 (444)
T ss_dssp EEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CB
T ss_pred ceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccccc
Confidence 344555555543 368999999999988530 1666664 4656789999999999 68875311
Q ss_pred -----cccchHHHHHHHHHHHHHHHhcCCce-EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc-----
Q 022960 93 -----LYGNYRREAEDLRAIVQDFCAKGRVI-TAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR----- 160 (289)
Q Consensus 93 -----~~~~~~~~~~d~~~~i~~l~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~----- 160 (289)
...++.++++|+.++++.+ +.++ ++|+||||||.+|+.+|.++|+ |+++|++++...........
T Consensus 173 ~~~~f~~~t~~~~a~dl~~ll~~l---~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~ 249 (444)
T 2vat_A 173 YGAKFPRTTIRDDVRIHRQVLDRL---GVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQR 249 (444)
T ss_dssp CGGGCCCCCHHHHHHHHHHHHHHH---TCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHhc---CCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHH
Confidence 1247888999999999998 7778 9999999999999999999999 99999999876432110000
Q ss_pred --------cc----------------chhHhhhh---hcCccccccccccc-----------------------cc----
Q 022960 161 --------LG----------------LGYLQRIK---QNGFIDVRNKKGKL-----------------------EY---- 186 (289)
Q Consensus 161 --------~~----------------~~~~~~~~---~~~~~~~~~~~~~~-----------------------~~---- 186 (289)
.. ......+. ...+.......... .+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (444)
T 2vat_A 250 QCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQP 329 (444)
T ss_dssp HHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------C
T ss_pred HHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCc
Confidence 00 00000000 00000000000000 00
Q ss_pred ccChhhh--------hhh------------h-ccc--------hhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC
Q 022960 187 RVTQESL--------MDR------------L-STD--------IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI 237 (289)
Q Consensus 187 ~~~~~~~--------~~~------------~-~~~--------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 237 (289)
....+.+ ... + ..+ .... ..++++|+|+++|++|.++|++.++.+++.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~ 407 (444)
T 2vat_A 330 IEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEA--LAMITQPALIICARSDGLYSFDEHVEMGRSI 407 (444)
T ss_dssp GGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHH--HTTCCSCEEEEECTTCSSSCHHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHH--hhcCCCCEEEEEeCCCCCCCHHHHHHHHHHC
Confidence 0000000 000 0 000 1111 2246899999999999999999999999999
Q ss_pred CCcEEEEEc-CCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 238 PNHKLHIIE-GADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 238 ~~~~~~~~~-~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
+++++++++ ++||+++ ++++++++.|.+||++.+
T Consensus 408 p~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 408 PNSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQSL 443 (444)
T ss_dssp TTEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC--
T ss_pred CCcEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHhc
Confidence 999999999 8999965 678899999999997654
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-29 Score=195.46 Aligned_cols=216 Identities=16% Similarity=0.107 Sum_probs=140.1
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVIT 119 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 119 (289)
.+++++||++||++++... |..+.+.|+++ ||+|+++|+||||.|..+.. .+.++.++++.++++.+ .+++
T Consensus 33 ~~~~~~vvllHG~~~~~~~--~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~l~~~~~~~----~~~~ 105 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSSYS--FRHLLEYINETHPGTVVTVLDLFDGRESLRPLW-EQVQGFREAVVPIMAKA----PQGV 105 (302)
T ss_dssp --CCCCEEEECCTTCCGGG--GHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH-HHHHHHHHHHHHHHHHC----TTCE
T ss_pred cCCCCeEEEECCCCCChhH--HHHHHHHHHhcCCCcEEEEeccCCCccchhhHH-HHHHHHHHHHHHHhhcC----CCcE
Confidence 3578899999999999854 99999999998 89999999999999876532 34445555555555443 4689
Q ss_pred EEEEeChhHHHHHHHHHhCCC--ccEEEEeccCCcccccccccc---cch----hHhhhhhcCcccccccccccccccCh
Q 022960 120 AIIGHSKGGNAVLLYASKYND--ISIVINISGRFNLKRGIEGRL---GLG----YLQRIKQNGFIDVRNKKGKLEYRVTQ 190 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (289)
+++||||||.+++.++.++|+ |+++|+++++........... ... ..........................
T Consensus 106 ~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (302)
T 1pja_A 106 HLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHD 185 (302)
T ss_dssp EEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGGBCCTTCH
T ss_pred EEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhhhhcccChhhh
Confidence 999999999999999999987 999999998654322110000 000 00000000000000000000000000
Q ss_pred hh------hhhhhcc--------chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-----------------
Q 022960 191 ES------LMDRLST--------DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN----------------- 239 (289)
Q Consensus 191 ~~------~~~~~~~--------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----------------- 239 (289)
.. +...+.. +.... ..+++ |+++++|++|.++|++.++.+.+..++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (302)
T 1pja_A 186 DLYLNASSFLALINGERDHPNATVWRKN--FLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSF 262 (302)
T ss_dssp HHHHHHCSSHHHHTTSSCCTTHHHHHHH--HTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHHHTTTT
T ss_pred hhhhccchHHHHhhcCCccccchhHHHH--HhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhhhhhhh
Confidence 00 0011100 01111 12457 999999999999999998888776666
Q ss_pred ----------cEEEEEcCCCcccc-cCchHHHHHHHHHH
Q 022960 240 ----------HKLHIIEGADHEFT-SHQDELASLVIQFI 267 (289)
Q Consensus 240 ----------~~~~~~~~~gH~~~-~~~~~~~~~i~~fl 267 (289)
+++++++++||+.+ ++++++.+.|.+||
T Consensus 263 ~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 263 GLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp SHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred chhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 89999999999966 56788999888886
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.2e-28 Score=188.62 Aligned_cols=220 Identities=13% Similarity=0.164 Sum_probs=156.9
Q ss_pred EEeeCCCCceEEEEEeec------CCCcEEEEEcCCCCC-CCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccch
Q 022960 25 VVIPNSHGEKLVGILHET------GSKQLVIVCHGFQST-KDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNY 97 (289)
Q Consensus 25 ~~~~~~~g~~l~~~~~~~------~~~~~iv~~hG~~~~-~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~ 97 (289)
..+...+|..+.+++..+ ++.|+||++||.+.. .....+..+++.|+++||.|+++|+||+|.|.+. ..+
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~---~~~ 93 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNY---NFL 93 (276)
T ss_dssp EECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCS---CTH
T ss_pred ccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCC---CcC
Confidence 456667888898877654 356899999995522 1123478899999999999999999999987643 244
Q ss_pred HHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHh-CCC-ccEEEEeccCCcccccccccccchhHhhh
Q 022960 98 RREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASK-YND-ISIVINISGRFNLKRGIEGRLGLGYLQRI 169 (289)
Q Consensus 98 ~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~-~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
....+|+.++++++.+. +.++++|+|||+||.+++.++.. .+. ++++|+++|..+......... .
T Consensus 94 ~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~~--~----- 166 (276)
T 3hxk_A 94 SQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSDL--S----- 166 (276)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSSS--S-----
T ss_pred chHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcch--h-----
Confidence 56778899999988775 34689999999999999999988 555 999999998766443211100 0
Q ss_pred hhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEE
Q 022960 170 KQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHII 245 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~ 245 (289)
+.... .... ... +... ...++.+|+|+++|++|.++|++.++.+.+.++ +++++++
T Consensus 167 ----~~~~~-----------~~~~-~~~--~~~~--~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~ 226 (276)
T 3hxk_A 167 ----HFNFE-----------IENI-SEY--NISE--KVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFF 226 (276)
T ss_dssp ----SSCCC-----------CSCC-GGG--BTTT--TCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEE
T ss_pred ----hhhcC-----------chhh-hhC--Chhh--ccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEE
Confidence 00000 0000 000 0011 112347899999999999999999888877764 3599999
Q ss_pred cCCCcccc-cCc-------------hHHHHHHHHHHHhhcCCC
Q 022960 246 EGADHEFT-SHQ-------------DELASLVIQFIKANYQKD 274 (289)
Q Consensus 246 ~~~gH~~~-~~~-------------~~~~~~i~~fl~~~~~~~ 274 (289)
++++|.+. ... .++.+.+.+||++..+..
T Consensus 227 ~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 269 (276)
T 3hxk_A 227 ESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKNL 269 (276)
T ss_dssp SCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCcccc
Confidence 99999864 222 468889999999887554
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-27 Score=189.77 Aligned_cols=230 Identities=13% Similarity=0.122 Sum_probs=143.4
Q ss_pred eEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHH-cCccEEEEccccCCCCCCCc-cccchHHHHHHHHHHHHHH
Q 022960 34 KLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALER-EGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQDF 111 (289)
Q Consensus 34 ~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l 111 (289)
+++++..+ +++|+|||+||++++.. .|..+.+.|++ .+|+|+++|+||||.|+... ...+++.+++|+.++++.+
T Consensus 28 ~~~~~~~g-~~~p~lvllHG~~~~~~--~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~~l~~l 104 (316)
T 3c5v_A 28 TFRVYKSG-SEGPVLLLLHGGGHSAL--SWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAM 104 (316)
T ss_dssp EEEEEEEC-SSSCEEEEECCTTCCGG--GGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecC-CCCcEEEEECCCCcccc--cHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHHHH
Confidence 45544333 36789999999998874 48999999987 26999999999999997643 3467899999999999998
Q ss_pred HhcCCceEEEEEeChhHHHHHHHHHh--CCCccEEEEeccCCccccc----cc-------cccc--chhHhhhhhcC---
Q 022960 112 CAKGRVITAIIGHSKGGNAVLLYASK--YNDISIVINISGRFNLKRG----IE-------GRLG--LGYLQRIKQNG--- 173 (289)
Q Consensus 112 ~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~v~~~v~~~~~~~~~~~----~~-------~~~~--~~~~~~~~~~~--- 173 (289)
.....++++|+||||||.+|+.+|.+ +|+|+++|++++....... .. .... ...........
T Consensus 105 ~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (316)
T 3c5v_A 105 YGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIR 184 (316)
T ss_dssp HTTCCCCEEEEEETHHHHHHHHHHHTTCCTTEEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHHHHHHTTSCC
T ss_pred hccCCCCeEEEEECHHHHHHHHHHhhccCCCcceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHHHhhhccccc
Confidence 43212579999999999999999986 4679999999864211000 00 0000 00000000000
Q ss_pred ------------cccccc--------cccccccccChhhhhhhh---ccchhhhhcccccCceEEEEEeCCCCccChhhH
Q 022960 174 ------------FIDVRN--------KKGKLEYRVTQESLMDRL---STDIHAACHMICQDCRVLTIHGTKDKMVPAEDA 230 (289)
Q Consensus 174 ------------~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 230 (289)
...... ......+........... ...... ...++++|+|+|+|++|.+.+...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~P~Lli~g~~D~~~~~~~- 261 (316)
T 3c5v_A 185 NLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGLSN--LFLSCPIPKLLLLAGVDRLDKDLT- 261 (316)
T ss_dssp CHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHHHHHTTHHH--HHHHSSSCEEEEESSCCCCCHHHH-
T ss_pred chhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhhhhhhhhHH--HhhcCCCCEEEEEecccccccHHH-
Confidence 000000 000000000000000000 000000 111468999999999998653322
Q ss_pred HHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 231 LEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
.....+++++++++++||+++ ++++++++.|.+||.+..
T Consensus 262 --~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 301 (316)
T 3c5v_A 262 --IGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHR 301 (316)
T ss_dssp --HHHHTTCSEEEECCCCSSCHHHHSHHHHHHHHHHHHHHTT
T ss_pred --HHhhCCceeEEEcCCCCCcccccCHHHHHHHHHHHHHhcc
Confidence 233346789999999999976 678899999999997643
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=197.93 Aligned_cols=121 Identities=20% Similarity=0.225 Sum_probs=98.7
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCc---chH-----------HHHHHHHHcCccEEEEccccCCCCCCCcc--
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRI---PMV-----------NLAAALEREGISAFRFDFSGNGESEGSFL-- 93 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~---~~~-----------~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-- 93 (289)
.++..+.+.....+++|+||++||++++...+ .|. .+++.|+++||+|+++|+||||.|.....
T Consensus 35 ~~~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~ 114 (354)
T 2rau_A 35 YDIISLHKVNLIGGGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQ 114 (354)
T ss_dssp TCEEEEEEEEETTCCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGG
T ss_pred CCceEEEeecccCCCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccc
Confidence 34455554444567889999999999987420 122 78999999999999999999999986543
Q ss_pred -----ccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccC
Q 022960 94 -----YGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGR 150 (289)
Q Consensus 94 -----~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~ 150 (289)
..++...++|+.++++++.+. +.++++++|||+||.+++.++..+ |+ |+++|++++.
T Consensus 115 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~ 179 (354)
T 2rau_A 115 LSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGG 179 (354)
T ss_dssp GGGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCS
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEeccc
Confidence 456688899999999998665 778999999999999999999998 88 9999999764
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=184.13 Aligned_cols=206 Identities=22% Similarity=0.225 Sum_probs=139.6
Q ss_pred cceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccc--
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY-- 94 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-- 94 (289)
++.+.+++. .||.+|.++++.|. +.|+||++||++++.....+..+++.|+++||.|+++|+||||.+......
T Consensus 29 ~~e~~~~~~-~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~ 107 (259)
T 4ao6_A 29 VQERGFSLE-VDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGRE 107 (259)
T ss_dssp EEEEEEEEE-ETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC------------
T ss_pred ceEEEEEEe-eCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccc
Confidence 444555554 68999999988653 567899999999886544578899999999999999999999988643211
Q ss_pred -----------------cchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCccccc
Q 022960 95 -----------------GNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRG 156 (289)
Q Consensus 95 -----------------~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~ 156 (289)
........|...+++++... +.+++.++|+|+||.+++.++...|+++++|+..+.......
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pri~Aav~~~~~~~~~~~ 187 (259)
T 4ao6_A 108 PTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKRIKVALLGLMGVEGVNG 187 (259)
T ss_dssp -CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTTEEEEEEESCCTTSTTH
T ss_pred cchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCceEEEEEeccccccccc
Confidence 01122345677777777555 778999999999999999999999998887765443221100
Q ss_pred ccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhh
Q 022960 157 IEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKF 236 (289)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 236 (289)
.. ..... .++++|+|+++|++|.++|++.++.+++.
T Consensus 188 ----------------------------------~~--------~~~~a--~~i~~P~Li~hG~~D~~vp~~~~~~l~~a 223 (259)
T 4ao6_A 188 ----------------------------------ED--------LVRLA--PQVTCPVRYLLQWDDELVSLQSGLELFGK 223 (259)
T ss_dssp ----------------------------------HH--------HHHHG--GGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ----------------------------------cc--------hhhhh--ccCCCCEEEEecCCCCCCCHHHHHHHHHH
Confidence 00 00011 14589999999999999999999999999
Q ss_pred CC--CcEEEEEcCCCcccccCchHHHHHHHHHHHhhcC
Q 022960 237 IP--NHKLHIIEGADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 237 ~~--~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
+. +.+++++++ +|... ...+..+.+.+||+++++
T Consensus 224 l~~~~k~l~~~~G-~H~~~-p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 224 LGTKQKTLHVNPG-KHSAV-PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp CCCSSEEEEEESS-CTTCC-CHHHHTHHHHHHHHHHCC
T ss_pred hCCCCeEEEEeCC-CCCCc-CHHHHHHHHHHHHHHhcC
Confidence 85 467888886 66532 124677889999999874
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-29 Score=203.24 Aligned_cols=249 Identities=14% Similarity=0.136 Sum_probs=158.5
Q ss_pred cceeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHH-HHHHHHHcCccEEEEccccCCCCCCCccccc
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVN-LAAALEREGISAFRFDFSGNGESEGSFLYGN 96 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~-~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 96 (289)
...+.+.++. +|.++.+++++++ +.|+||++||++++... |.. +...+.++||.|+++|+||+|.|........
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~~~--~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~ 209 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAIISEDKAQDTLIVVGGGDTSRED--LFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFE 209 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECCSSSCCCEEEEECCSSCCHHH--HHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCCCC
T ss_pred CCcEEEEEeE-CCeEEEEEEEcCCCCCCCEEEEECCCCCCHHH--HHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCCCC
Confidence 3456677775 5778888877655 34899999999888754 444 3346667899999999999999964433222
Q ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhH-hhhhhcCcc
Q 022960 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYL-QRIKQNGFI 175 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 175 (289)
.++.+|+.++++++.... ++++|+|||+||.+++.++..+|.|+++|+++|..+.............. .......+.
T Consensus 210 -~~~~~d~~~~~~~l~~~~-~~v~l~G~S~GG~~a~~~a~~~p~v~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~ 287 (405)
T 3fnb_A 210 -VDARAAISAILDWYQAPT-EKIAIAGFSGGGYFTAQAVEKDKRIKAWIASTPIYDVAEVFRISFSTALKAPKTILKWGS 287 (405)
T ss_dssp -SCTHHHHHHHHHHCCCSS-SCEEEEEETTHHHHHHHHHTTCTTCCEEEEESCCSCHHHHHHHHCC--------------
T ss_pred -ccHHHHHHHHHHHHHhcC-CCEEEEEEChhHHHHHHHHhcCcCeEEEEEecCcCCHHHHHHHhhhhhhhCcHHHHHHHH
Confidence 355789999999996544 78999999999999999999999999999999987654332211111000 000000000
Q ss_pred ccccccc-c-------cccccChhhhhhhhccc--hhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcE
Q 022960 176 DVRNKKG-K-------LEYRVTQESLMDRLSTD--IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHK 241 (289)
Q Consensus 176 ~~~~~~~-~-------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~ 241 (289)
....... . ..+..........+... ........++++|+|+++|++|.++|++.++.+++.++ +++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~~ 367 (405)
T 3fnb_A 288 KLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDVT 367 (405)
T ss_dssp ----CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCce
Confidence 0000000 0 00000000000000000 00000022568999999999999999999999888874 467
Q ss_pred EEEEc---CCCcccc-cCchHHHHHHHHHHHhhcCC
Q 022960 242 LHIIE---GADHEFT-SHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 242 ~~~~~---~~gH~~~-~~~~~~~~~i~~fl~~~~~~ 273 (289)
+++++ +++|... +.++.+.+.|.+||++.++.
T Consensus 368 l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 368 LRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp EEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred EEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 99994 4545443 55678999999999998854
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-27 Score=190.25 Aligned_cols=238 Identities=17% Similarity=0.134 Sum_probs=162.6
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF- 92 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~- 92 (289)
..+..+++.+++.+|.++.++++.|. +.|+||++||++++... + .....|+++||.|+++|+||+|.|.+..
T Consensus 64 ~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~--~-~~~~~l~~~G~~v~~~d~rG~g~s~~~~~ 140 (337)
T 1vlq_A 64 KTVEAYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGF--P-HDWLFWPSMGYICFVMDTRGQGSGWLKGD 140 (337)
T ss_dssp SSEEEEEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCC--G-GGGCHHHHTTCEEEEECCTTCCCSSSCCC
T ss_pred CCeEEEEEEEEcCCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCC--c-hhhcchhhCCCEEEEecCCCCCCcccCCC
Confidence 34667889999889999998877543 45899999999987643 2 3445677889999999999999764321
Q ss_pred --c----------------------ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEE
Q 022960 93 --L----------------------YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVI 145 (289)
Q Consensus 93 --~----------------------~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v 145 (289)
. ...+....+|+.++++++.+. +.++++++|||+||.+++.++...|+++++|
T Consensus 141 ~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~v~~~v 220 (337)
T 1vlq_A 141 TPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKALL 220 (337)
T ss_dssp CCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSSCCEEE
T ss_pred CcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCCCccEEE
Confidence 0 112346789999999999776 2458999999999999999999999999999
Q ss_pred EeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhh-ccchhhhhcccccCceEEEEEeCCCCc
Q 022960 146 NISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL-STDIHAACHMICQDCRVLTIHGTKDKM 224 (289)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~ 224 (289)
+.+|...................+.. +.... ..........+ ..+...... ++++|+|+++|++|.+
T Consensus 221 l~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------~~~~~~~~~~~~~~~~~~~~~--~i~~P~lii~G~~D~~ 288 (337)
T 1vlq_A 221 CDVPFLCHFRRAVQLVDTHPYAEITN--FLKTH--------RDKEEIVFRTLSYFDGVNFAA--RAKIPALFSVGLMDNI 288 (337)
T ss_dssp EESCCSCCHHHHHHHCCCTTHHHHHH--HHHHC--------TTCHHHHHHHHHTTCHHHHHT--TCCSCEEEEEETTCSS
T ss_pred ECCCcccCHHHHHhcCCCcchHHHHH--HHHhC--------chhHHHHHHhhhhccHHHHHH--HcCCCEEEEeeCCCCC
Confidence 99886543211110000000000000 00000 00000111111 011111122 4579999999999999
Q ss_pred cChhhHHHHHhhCCC-cEEEEEcCCCcccccCchHHHHHHHHHHHhhcC
Q 022960 225 VPAEDALEFDKFIPN-HKLHIIEGADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 225 ~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
+|++.++.+++.++. +++++++++||.+. .++..+.+.+||.+++.
T Consensus 289 ~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~--~~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 289 CPPSTVFAAYNYYAGPKEIRIYPYNNHEGG--GSFQAVEQVKFLKKLFE 335 (337)
T ss_dssp SCHHHHHHHHHHCCSSEEEEEETTCCTTTT--HHHHHHHHHHHHHHHHC
T ss_pred CCchhHHHHHHhcCCCcEEEEcCCCCCCCc--chhhHHHHHHHHHHHHh
Confidence 999999999999874 89999999999963 34677889999988774
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=185.43 Aligned_cols=217 Identities=12% Similarity=0.153 Sum_probs=144.5
Q ss_pred cceeeEEeeCCCCceEEEEEeec---------CCCcEEEEEcC---CCCCCCCcchHHHHHHHHHcCccEEEEccccCCC
Q 022960 20 VQRRRVVIPNSHGEKLVGILHET---------GSKQLVIVCHG---FQSTKDRIPMVNLAAALEREGISAFRFDFSGNGE 87 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~---------~~~~~iv~~hG---~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 87 (289)
+..+.+++. .+|..+.+.++.| ++.|+||++|| .+++.. .|..+++.|+++||.|+++|+||+|.
T Consensus 2 m~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~ 78 (277)
T 3bxp_A 2 MQVEQRTLN-TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGR--EEAPIATRMMAAGMHTVVLNYQLIVG 78 (277)
T ss_dssp EEEEEEEEC-STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCT--THHHHHHHHHHTTCEEEEEECCCSTT
T ss_pred cceEEEEec-cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCc--cchHHHHHHHHCCCEEEEEecccCCC
Confidence 445667774 4566666655433 25689999999 444543 48889999999999999999999994
Q ss_pred CCCCccccchHHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhC--------------CC-ccEEEE
Q 022960 88 SEGSFLYGNYRREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKY--------------ND-ISIVIN 146 (289)
Q Consensus 88 s~~~~~~~~~~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~--------------p~-v~~~v~ 146 (289)
+.. .+....+|+.++++++.+. +.++++|+|||+||.+|+.++..+ +. ++++|+
T Consensus 79 ~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~ 153 (277)
T 3bxp_A 79 DQS-----VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIIL 153 (277)
T ss_dssp TCC-----CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEE
T ss_pred CCc-----cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEE
Confidence 433 3345567777777777654 345899999999999999999884 45 999999
Q ss_pred eccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccC
Q 022960 147 ISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVP 226 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 226 (289)
++|..+........ ..+...+.. .....+.... ..++.+|+|+++|++|.++|
T Consensus 154 ~~p~~~~~~~~~~~--~~~~~~~~~-----------------------~~~~~~~~~~--~~~~~~P~lii~G~~D~~vp 206 (277)
T 3bxp_A 154 GYPVIDLTAGFPTT--SAARNQITT-----------------------DARLWAAQRL--VTPASKPAFVWQTATDESVP 206 (277)
T ss_dssp ESCCCBTTSSSSSS--HHHHHHHCS-----------------------CGGGSBGGGG--CCTTSCCEEEEECTTCCCSC
T ss_pred eCCcccCCCCCCCc--cccchhccc-----------------------hhhhcCHhhc--cccCCCCEEEEeeCCCCccC
Confidence 99976543221100 000000000 0000000111 11347899999999999999
Q ss_pred hhhHHHHHhhCC----CcEEEEEcCCCcccc-cC---------------chHHHHHHHHHHHhhc
Q 022960 227 AEDALEFDKFIP----NHKLHIIEGADHEFT-SH---------------QDELASLVIQFIKANY 271 (289)
Q Consensus 227 ~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~---------------~~~~~~~i~~fl~~~~ 271 (289)
++.++.+.+.++ +++++++++++|.+. .+ .+++.+.+.+||+++.
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 207 PINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp THHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 998888877653 469999999999643 22 2568889999998753
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.8e-28 Score=175.32 Aligned_cols=170 Identities=18% Similarity=0.238 Sum_probs=134.6
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCc---cEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGI---SAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITA 120 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~---~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 120 (289)
++|+||++||++++... |..+.+.|.+.|| +|+++|+||+|.+.. .+..+.++++.++++.+ +.++++
T Consensus 2 ~~~~vv~~HG~~~~~~~--~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~----~~~~~~~~~~~~~~~~~---~~~~~~ 72 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFN--FAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY----NNGPVLSRFVQKVLDET---GAKKVD 72 (181)
T ss_dssp CCCCEEEECCTTCCGGG--GHHHHHHHHHTTCCGGGEEECCCSCTTCCHH----HHHHHHHHHHHHHHHHH---CCSCEE
T ss_pred CCCeEEEECCcCCCHhH--HHHHHHHHHHcCCCCccEEEEecCCCCCchh----hhHHHHHHHHHHHHHHc---CCCeEE
Confidence 46889999999998854 8999999999998 799999999998753 34566677888887776 777899
Q ss_pred EEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhh
Q 022960 121 IIGHSKGGNAVLLYASKY--ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL 197 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (289)
++||||||.+++.++.++ |+ ++++|+++++...... ..+ . .
T Consensus 73 lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~---------------~~~---~---~--------------- 116 (181)
T 1isp_A 73 IVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG---------------KAL---P---G--------------- 116 (181)
T ss_dssp EEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS---------------BCC---C---C---------------
T ss_pred EEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc---------------ccC---C---C---------------
Confidence 999999999999999987 76 9999999987543210 000 0 0
Q ss_pred ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHhhc
Q 022960 198 STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 198 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
. ....++|+++++|++|.++|++.+ .++++++++++++||.++.+.+++.+.|.+||++..
T Consensus 117 -~-------~~~~~~p~l~i~G~~D~~v~~~~~-----~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 117 -T-------DPNQKILYTSIYSSADMIVMNYLS-----RLDGARNVQIHGVGHIGLLYSSQVNSLIKEGLNGGG 177 (181)
T ss_dssp -S-------CTTCCCEEEEEEETTCSSSCHHHH-----CCBTSEEEEESSCCTGGGGGCHHHHHHHHHHHTTTC
T ss_pred -C-------CCccCCcEEEEecCCCcccccccc-----cCCCCcceeeccCchHhhccCHHHHHHHHHHHhccC
Confidence 0 001267999999999999998854 378899999999999976544689999999997643
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-28 Score=206.58 Aligned_cols=234 Identities=16% Similarity=0.114 Sum_probs=166.8
Q ss_pred cceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEcccc---CCCCCCCc
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSG---NGESEGSF 92 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G---~G~s~~~~ 92 (289)
...+.+.+++.+|.++.++++.|. +.|+||++||++.......|..+++.|+++||.|+++|+|| ||.+....
T Consensus 331 ~~~~~~~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~ 410 (582)
T 3o4h_A 331 AGSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLK 410 (582)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHT
T ss_pred CcceEEEEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhh
Confidence 356788899889999999887664 57899999998876433458889999999999999999999 55552211
Q ss_pred c-ccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhh
Q 022960 93 L-YGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRI 169 (289)
Q Consensus 93 ~-~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
. ........+|+.++++++.++ ..++++|+|||+||++++.++.++|+ ++++|+++|..+......... .....+
T Consensus 411 ~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~--~~~~~~ 488 (582)
T 3o4h_A 411 IIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSD--AAFRNF 488 (582)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCC--HHHHHH
T ss_pred hhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhccc--chhHHH
Confidence 1 112244578999999999776 34489999999999999999999999 999999999766432211100 000000
Q ss_pred hhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC----cEEEEE
Q 022960 170 KQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN----HKLHII 245 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~ 245 (289)
....+. .....+.. ........ ++++|+|+++|++|..+|++.++.+++.++. ++++++
T Consensus 489 ~~~~~~------------~~~~~~~~---~sp~~~~~--~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~ 551 (582)
T 3o4h_A 489 IEQLTG------------GSREIMRS---RSPINHVD--RIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHII 551 (582)
T ss_dssp HHHHTT------------TCHHHHHH---TCGGGGGG--GCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHcC------------cCHHHHHh---cCHHHHHh--cCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEE
Confidence 000000 00111111 11111122 3589999999999999999999988887754 899999
Q ss_pred cCCCcccc--cCchHHHHHHHHHHHhhcC
Q 022960 246 EGADHEFT--SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 246 ~~~gH~~~--~~~~~~~~~i~~fl~~~~~ 272 (289)
+++||.+. +...++.+.+.+||+++++
T Consensus 552 ~~~gH~~~~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 552 PDAGHAINTMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp TTCCSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHcC
Confidence 99999976 3456899999999999875
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=195.29 Aligned_cols=236 Identities=18% Similarity=0.183 Sum_probs=158.0
Q ss_pred cceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccc
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN 96 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 96 (289)
...+.+.++. +|..+.++++.|. +.|+||++||++++... .|..+...|.++||.|+++|+||+|.|.......+
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~-~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~ 243 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTD-MWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTED 243 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCSSSCEEEEEEECCTTSCGGG-GHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCCSC
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCCCCCCCEEEEECCCCccHHH-HHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCC
Confidence 4566778876 6778888877553 56899999999988653 46667888888999999999999999986554444
Q ss_pred hHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc---cccccchhHhhh
Q 022960 97 YRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGI---EGRLGLGYLQRI 169 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~---~~~~~~~~~~~~ 169 (289)
+.... ..+++++... +.++++++|||+||.+++.++..+|+ |+++|+++|........ .......+...+
T Consensus 244 ~~~~~---~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (415)
T 3mve_A 244 YSRLH---QAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPKMYLDVL 320 (415)
T ss_dssp TTHHH---HHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTTSCHHHHHHH
T ss_pred HHHHH---HHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHHhHHHHHHHH
Confidence 44444 4445555444 35689999999999999999998886 99999999875422110 001111111111
Q ss_pred hhcCcccccccccccccccChhhhhhhhccchhhhh--c-ccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEc
Q 022960 170 KQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAAC--H-MICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIE 246 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
... +. . .......+...+........ . ..++++|+|+++|++|.++|++.++.+.+..++++++.++
T Consensus 321 ~~~-~g-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~l~~i~ 390 (415)
T 3mve_A 321 ASR-LG-------K--SVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFSTYGKAKKIS 390 (415)
T ss_dssp HHH-TT-------C--SSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHHTBTTCEEEEEC
T ss_pred HHH-hC-------C--CccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCceEEEec
Confidence 000 00 0 00011111111111000000 0 1256899999999999999999999999999999999999
Q ss_pred CCCcccccCchHHHHHHHHHHHhhcC
Q 022960 247 GADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 247 ~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
+..+ +...+++.+.+.+||++++.
T Consensus 391 g~~~--h~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 391 SKTI--TQGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp CCSH--HHHHHHHHHHHHHHHHHHHT
T ss_pred CCCc--ccchHHHHHHHHHHHHHHhc
Confidence 8322 23467889999999998764
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-28 Score=191.46 Aligned_cols=185 Identities=17% Similarity=0.199 Sum_probs=140.6
Q ss_pred eEEEEEeecC--CCcEEEEEcCCCCCCCCcchH-------HHHHHHHHcCccEEEEccccCCCCCCCccccc--------
Q 022960 34 KLVGILHETG--SKQLVIVCHGFQSTKDRIPMV-------NLAAALEREGISAFRFDFSGNGESEGSFLYGN-------- 96 (289)
Q Consensus 34 ~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~-------~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~-------- 96 (289)
.+++.++.++ .+++|||+||++.+... |. .+++.|.++||.|+++|+||||.|........
T Consensus 49 ~~~~~~~~p~~~~~~~vvl~HG~g~~~~~--~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~ 126 (328)
T 1qlw_A 49 QMYVRYQIPQRAKRYPITLIHGCCLTGMT--WETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAP 126 (328)
T ss_dssp CEEEEEEEETTCCSSCEEEECCTTCCGGG--GSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSC
T ss_pred eEEEEEEccCCCCCccEEEEeCCCCCCCc--cccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccC
Confidence 3455555444 57899999999988754 66 48899999999999999999999986542211
Q ss_pred --------------------------------------hHH------------------HHHHHHHHHHHHHhcCCceEE
Q 022960 97 --------------------------------------YRR------------------EAEDLRAIVQDFCAKGRVITA 120 (289)
Q Consensus 97 --------------------------------------~~~------------------~~~d~~~~i~~l~~~~~~~~~ 120 (289)
+++ ..+++.++++.+ + +++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~---~--~~~ 201 (328)
T 1qlw_A 127 ASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL---D--GTV 201 (328)
T ss_dssp GGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH---T--SEE
T ss_pred cccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh---C--Cce
Confidence 222 455666666655 3 799
Q ss_pred EEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhcc
Q 022960 121 IIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST 199 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (289)
++|||+||.+++.++..+|+ |+++|+++|.... ....
T Consensus 202 lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~~-----------------------------------~~~~------- 239 (328)
T 1qlw_A 202 LLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECP-----------------------------------KPED------- 239 (328)
T ss_dssp EEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCC-----------------------------------CGGG-------
T ss_pred EEEECcccHHHHHHHHhChhheeEEEEeCCCCCC-----------------------------------CHHH-------
Confidence 99999999999999999988 9999999875300 0000
Q ss_pred chhhhhcccccCceEEEEEeCCCCccCh-----hhHHHHHhhCC----CcEEEEEcCCC-----cccc-cC-chHHHHHH
Q 022960 200 DIHAACHMICQDCRVLTIHGTKDKMVPA-----EDALEFDKFIP----NHKLHIIEGAD-----HEFT-SH-QDELASLV 263 (289)
Q Consensus 200 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~-----~~~~~~~~~~~----~~~~~~~~~~g-----H~~~-~~-~~~~~~~i 263 (289)
... .+++|+|+++|++|.++|+ +.++.+.+.++ +++++.++++| |+++ +. ++++.+.|
T Consensus 240 ----~~~--~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i 313 (328)
T 1qlw_A 240 ----VKP--LTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLI 313 (328)
T ss_dssp ----CGG--GTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHH
T ss_pred ----Hhh--ccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHH
Confidence 000 1268999999999999996 88888888776 78999999666 9976 44 58899999
Q ss_pred HHHHHhhcCC
Q 022960 264 IQFIKANYQK 273 (289)
Q Consensus 264 ~~fl~~~~~~ 273 (289)
.+||++.+.+
T Consensus 314 ~~fl~~~~~~ 323 (328)
T 1qlw_A 314 LDWIGRNTAK 323 (328)
T ss_dssp HHHHHHTCC-
T ss_pred HHHHHhcccC
Confidence 9999987643
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=175.41 Aligned_cols=182 Identities=18% Similarity=0.207 Sum_probs=130.8
Q ss_pred CCcEEEEEcCCCCCCC-CcchHH-HHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCC-ceE
Q 022960 44 SKQLVIVCHGFQSTKD-RIPMVN-LAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGR-VIT 119 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~-~~~~~~-~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~-~~~ 119 (289)
++|+||++||++++.. ...|.. +.+.|++. ||+|+++|+||++. ....+++..+++.+ +. +++
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~----------~~~~~~~~~~~~~l---~~~~~~ 69 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT----------ARESIWLPFMETEL---HCDEKT 69 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT----------CCHHHHHHHHHHTS---CCCTTE
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc----------ccHHHHHHHHHHHh---CcCCCE
Confidence 5689999999999841 112554 88899887 99999999998642 12345666666655 55 789
Q ss_pred EEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhcc
Q 022960 120 AIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST 199 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (289)
+|+||||||.+++.++.++| |+++|++++......... ... ..+.. . ....
T Consensus 70 ~lvG~S~Gg~ia~~~a~~~p-v~~lvl~~~~~~~~~~~~--------~~~--~~~~~---~------~~~~--------- 120 (194)
T 2qs9_A 70 IIIGHSSGAIAAMRYAETHR-VYAIVLVSAYTSDLGDEN--------ERA--SGYFT---R------PWQW--------- 120 (194)
T ss_dssp EEEEETHHHHHHHHHHHHSC-CSEEEEESCCSSCTTCHH--------HHH--TSTTS---S------CCCH---------
T ss_pred EEEEcCcHHHHHHHHHHhCC-CCEEEEEcCCccccchhh--------hHH--Hhhhc---c------cccH---------
Confidence 99999999999999999999 999999998764321110 000 00000 0 0000
Q ss_pred chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHhhcCC
Q 022960 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 200 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~~ 273 (289)
.... .+.+|+++++|++|.++|++.++.+.+.+ ++++.+++++||.++.+.++....+.+||++....
T Consensus 121 ---~~~~--~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~~~fl~~~~~~ 188 (194)
T 2qs9_A 121 ---EKIK--ANCPYIVQFGSTDDPFLPWKEQQEVADRL-ETKLHKFTDCGHFQNTEFHELITVVKSLLKVPALE 188 (194)
T ss_dssp ---HHHH--HHCSEEEEEEETTCSSSCHHHHHHHHHHH-TCEEEEESSCTTSCSSCCHHHHHHHHHHHTCCCCC
T ss_pred ---HHHH--hhCCCEEEEEeCCCCcCCHHHHHHHHHhc-CCeEEEeCCCCCccchhCHHHHHHHHHHHHhhhhh
Confidence 0011 22679999999999999999999999988 89999999999997755555555566999876544
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-27 Score=191.59 Aligned_cols=118 Identities=13% Similarity=0.070 Sum_probs=102.4
Q ss_pred CCCCceEEEEEeec--CCCcEEEEEcCCCCCCCCcchHHHHHHHHHc---------CccEEEEccccCCCCCCCcc-ccc
Q 022960 29 NSHGEKLVGILHET--GSKQLVIVCHGFQSTKDRIPMVNLAAALERE---------GISAFRFDFSGNGESEGSFL-YGN 96 (289)
Q Consensus 29 ~~~g~~l~~~~~~~--~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~---------G~~v~~~d~~G~G~s~~~~~-~~~ 96 (289)
..+|.++++....+ +++++|||+||++++... |..+++.|.+. ||+|+++|+||||.|+.... ..+
T Consensus 74 ~i~g~~i~~~~~~~~~~~~~plll~HG~~~s~~~--~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~~~~~ 151 (388)
T 4i19_A 74 EIDGATIHFLHVRSPEPDATPMVITHGWPGTPVE--FLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKSAGWE 151 (388)
T ss_dssp EETTEEEEEEEECCSSTTCEEEEEECCTTCCGGG--GHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSSCCCC
T ss_pred EECCeEEEEEEccCCCCCCCeEEEECCCCCCHHH--HHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCCCCCC
Confidence 34788999776643 367899999999999854 89999999885 89999999999999987764 567
Q ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 97 YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
+.+.++++.++++.+ +.++++++||||||.+++.+|.++|+ |++++++++..
T Consensus 152 ~~~~a~~~~~l~~~l---g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 152 LGRIAMAWSKLMASL---GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp HHHHHHHHHHHHHHT---TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred HHHHHHHHHHHHHHc---CCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 888899999999887 77899999999999999999999999 99999998643
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-26 Score=184.54 Aligned_cols=222 Identities=13% Similarity=0.104 Sum_probs=139.9
Q ss_pred ceEEEEEee-cC-CCcEEEEEcCCCCCCCCc-chHHHHHHHHHcCccEEEE----ccccCCCCCCCccccchHHHHHHHH
Q 022960 33 EKLVGILHE-TG-SKQLVIVCHGFQSTKDRI-PMVNLAAALEREGISAFRF----DFSGNGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 33 ~~l~~~~~~-~~-~~~~iv~~hG~~~~~~~~-~~~~~~~~l~~~G~~v~~~----d~~G~G~s~~~~~~~~~~~~~~d~~ 105 (289)
..+++..++ .+ .+|+|||+||++++...+ +|..+++.| +.||+|+++ |+||||.|+. ...++|+.
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~~-------~~~~~d~~ 95 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQDH-------AHDAEDVD 95 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCCH-------HHHHHHHH
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCccc-------cCcHHHHH
Confidence 567766565 33 568999999998765432 367888888 568999999 5599999852 34567888
Q ss_pred HHHHHHHh-cCCceEEEEEeChhHHHHHHHHH--hCCC-ccEEEEeccCCccccccccc-ccch---hHhhhhhcC-ccc
Q 022960 106 AIVQDFCA-KGRVITAIIGHSKGGNAVLLYAS--KYND-ISIVINISGRFNLKRGIEGR-LGLG---YLQRIKQNG-FID 176 (289)
Q Consensus 106 ~~i~~l~~-~~~~~~~l~G~S~Gg~~a~~~a~--~~p~-v~~~v~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~-~~~ 176 (289)
++++++.+ .+.++++|+||||||.+|+.+|. .+|+ |+++|++++........... .... ....+.... ...
T Consensus 96 ~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (335)
T 2q0x_A 96 DLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHVEKLMAEGRGED 175 (335)
T ss_dssp HHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHHHHHhhccCccc
Confidence 88887765 37889999999999999999999 4688 99999998864322100000 0000 000000000 000
Q ss_pred ccccccccccccChhhhh-------------hhh---ccchhhhhcccccCceEEEEEeCCCCccChhh-----HHHHHh
Q 022960 177 VRNKKGKLEYRVTQESLM-------------DRL---STDIHAACHMICQDCRVLTIHGTKDKMVPAED-----ALEFDK 235 (289)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~-------------~~~---~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-----~~~~~~ 235 (289)
................+. ... ..+... ...++++|+|+|+|++|.++|++. .+.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~ 253 (335)
T 2q0x_A 176 SLAMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRR--SVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRD 253 (335)
T ss_dssp GGGGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHH--TGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHH
T ss_pred cccchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHH--HHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHH
Confidence 000000000000000000 000 001111 122468999999999999999763 567788
Q ss_pred hCCCcE--------E-----EEEcCCCcccccCchHHHHHHHHHHHhhc
Q 022960 236 FIPNHK--------L-----HIIEGADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 236 ~~~~~~--------~-----~~~~~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
.+++++ + ++++++|| ++++.|.+||++..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~i~~agH-------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 254 HTGCNRVTVSYFNDTCDELRRVLKAAES-------EHVAAILQFLADED 295 (335)
T ss_dssp HSSSSCEEEEECCCEECTTSCEEECCHH-------HHHHHHHHHHHHHH
T ss_pred hcCccccccccccchhhhhhcccCCCCC-------HHHHHHHHHHHhhh
Confidence 888887 6 89999999 45889999997653
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=180.45 Aligned_cols=182 Identities=20% Similarity=0.191 Sum_probs=142.4
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEE-------------------ccccCCCCCCCccccchHHHHHH
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRF-------------------DFSGNGESEGSFLYGNYRREAED 103 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~-------------------d~~G~G~s~~~~~~~~~~~~~~d 103 (289)
+++|+||++||++++... |..+.+.|++.||.|+++ |++|+ .+.......++...+++
T Consensus 21 ~~~~~vv~lHG~~~~~~~--~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~~~~~~~~~~~~ 97 (232)
T 1fj2_A 21 KATAAVIFLHGLGDTGHG--WAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQEDESGIKQAAEN 97 (232)
T ss_dssp CCSEEEEEECCSSSCHHH--HHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCBCHHHHHHHHHH
T ss_pred CCCceEEEEecCCCccch--HHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-CcccccccHHHHHHHHH
Confidence 367899999999998754 888888888889999998 66776 33333345567788899
Q ss_pred HHHHHHHHHhcCC--ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCccccccc
Q 022960 104 LRAIVQDFCAKGR--VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNK 180 (289)
Q Consensus 104 ~~~~i~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (289)
+.++++++.+.+. ++++++|||+||.+++.++..+|+ ++++|++++..........
T Consensus 98 ~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~--------------------- 156 (232)
T 1fj2_A 98 IKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQ--------------------- 156 (232)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSCS---------------------
T ss_pred HHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccccc---------------------
Confidence 9999998865544 789999999999999999999998 9999999987654321100
Q ss_pred ccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC------CCcEEEEEcCCCccccc
Q 022960 181 KGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI------PNHKLHIIEGADHEFTS 254 (289)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~ 254 (289)
.......+++|+++++|++|.++|.+.++.+.+.+ ++++++++++++|.+
T Consensus 157 ----------------------~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~-- 212 (232)
T 1fj2_A 157 ----------------------GPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSS-- 212 (232)
T ss_dssp ----------------------SCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSC--
T ss_pred ----------------------cccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCccc--
Confidence 00011134789999999999999999888777766 568999999999997
Q ss_pred CchHHHHHHHHHHHhhcCC
Q 022960 255 HQDELASLVIQFIKANYQK 273 (289)
Q Consensus 255 ~~~~~~~~i~~fl~~~~~~ 273 (289)
..+..+.+.+||++.+..
T Consensus 213 -~~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 213 -CQQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp -CHHHHHHHHHHHHHHSCC
T ss_pred -CHHHHHHHHHHHHHhcCC
Confidence 344558999999988754
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=184.30 Aligned_cols=207 Identities=14% Similarity=0.072 Sum_probs=147.1
Q ss_pred EEeeCCCCceEEEEEeec--CCCcEEEEEcCCC---CCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHH
Q 022960 25 VVIPNSHGEKLVGILHET--GSKQLVIVCHGFQ---STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99 (289)
Q Consensus 25 ~~~~~~~g~~l~~~~~~~--~~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~ 99 (289)
..++..++..+.+.++.+ +++|+||++||++ ++.. .|..+++.|+++||.|+++|+||++.. ++..
T Consensus 41 ~~i~~~~~~~~~~~~~~p~~~~~p~vv~~HGgg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~~~~~~-------~~~~ 111 (262)
T 2pbl_A 41 LNLSYGEGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFDKS--SWSHLAVGALSKGWAVAMPSYELCPEV-------RISE 111 (262)
T ss_dssp EEEESSSSTTCEEEEECCSSSCSEEEEEECCSTTTSCCGG--GCGGGGHHHHHTTEEEEEECCCCTTTS-------CHHH
T ss_pred cccccCCCCCceEEEEccCCCCCCEEEEEcCcccccCChH--HHHHHHHHHHhCCCEEEEeCCCCCCCC-------ChHH
Confidence 344444454555555543 4688999999965 4443 478889999999999999999998642 4677
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC------CC-ccEEEEeccCCcccccccccccchhHhhhhhc
Q 022960 100 EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY------ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQN 172 (289)
Q Consensus 100 ~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (289)
.++|+.++++++..+..++++|+|||+||.+++.++..+ |. ++++|+++|..+............ +
T Consensus 112 ~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~~~~~----~--- 184 (262)
T 2pbl_A 112 ITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNEK----F--- 184 (262)
T ss_dssp HHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTHHH----H---
T ss_pred HHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhhhhhh----h---
Confidence 889999999999776336899999999999999999887 66 999999999776543221111000 0
Q ss_pred CcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCccc
Q 022960 173 GFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEF 252 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 252 (289)
......... . ... .....+++|+++++|++|.+++.+.++.+.+.++ +++++++++||++
T Consensus 185 --------------~~~~~~~~~-~--~~~--~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~ 244 (262)
T 2pbl_A 185 --------------KMDADAAIA-E--SPV--EMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-ADHVIAFEKHHFN 244 (262)
T ss_dssp --------------CCCHHHHHH-T--CGG--GCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-CEEEEETTCCTTT
T ss_pred --------------CCCHHHHHh-c--Ccc--cccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-CeEEEeCCCCcch
Confidence 000011000 0 000 1112458999999999999999999999999988 9999999999996
Q ss_pred c-cCchHHHHHHHHHH
Q 022960 253 T-SHQDELASLVIQFI 267 (289)
Q Consensus 253 ~-~~~~~~~~~i~~fl 267 (289)
+ +.+.+....+.+++
T Consensus 245 ~~~~~~~~~~~l~~~l 260 (262)
T 2pbl_A 245 VIEPLADPESDLVAVI 260 (262)
T ss_dssp TTGGGGCTTCHHHHHH
T ss_pred HHhhcCCCCcHHHHHH
Confidence 5 44455555565554
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=177.11 Aligned_cols=186 Identities=18% Similarity=0.225 Sum_probs=123.2
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcC--ccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEE
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREG--ISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAII 122 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G--~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~ 122 (289)
.|+|||+||++++..++....+.+.+.+.| |+|+++|+||||. +..+++..+++.+ ..++++|+
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~-----------~~~~~l~~~~~~~---~~~~i~l~ 67 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPA-----------EAAEMLESIVMDK---AGQSIGIV 67 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHH-----------HHHHHHHHHHHHH---TTSCEEEE
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHH-----------HHHHHHHHHHHhc---CCCcEEEE
Confidence 489999999998876533455677777764 8999999999874 3356666666655 67799999
Q ss_pred EeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccch
Q 022960 123 GHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDI 201 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (289)
|+||||.+|+.+|.++|. +..++...++.......... .........+........+...
T Consensus 68 G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~--- 128 (202)
T 4fle_A 68 GSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGE----------------NQNPYTGQKYVLESRHIYDLKA--- 128 (202)
T ss_dssp EETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEE----------------EECTTTCCEEEECHHHHHHHHT---
T ss_pred EEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhh----------------hccccccccccchHHHHHHHHh---
Confidence 999999999999999998 44444433321111000000 0000000011111111111110
Q ss_pred hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHH
Q 022960 202 HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIK 268 (289)
Q Consensus 202 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 268 (289)
......++++|+|+++|++|.+||++.+++++ +++++.+++|++|.+ .+.+++.+.|.+||+
T Consensus 129 -~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~---~~~~l~i~~g~~H~~-~~~~~~~~~I~~FL~ 190 (202)
T 4fle_A 129 -MQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY---TPCRQTVESGGNHAF-VGFDHYFSPIVTFLG 190 (202)
T ss_dssp -TCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT---TTSEEEEESSCCTTC-TTGGGGHHHHHHHHT
T ss_pred -hhhhhhccCceEEEEEeCCCCCCCHHHHHHHh---hCCEEEEECCCCcCC-CCHHHHHHHHHHHHh
Confidence 11112245899999999999999999888764 688999999999975 456788999999996
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-27 Score=184.87 Aligned_cols=220 Identities=15% Similarity=0.122 Sum_probs=150.2
Q ss_pred ccceeeEEeeCCCCceEEEEEeec--------CCCcEEEEEcCCCCC-CCCcchHHHHHHHHHcCccEEEEccccCCCCC
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHET--------GSKQLVIVCHGFQST-KDRIPMVNLAAALEREGISAFRFDFSGNGESE 89 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~--------~~~~~iv~~hG~~~~-~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 89 (289)
....+++.+...+|..+.+.++++ ++.|+||++||++.. .....|..+++.|+++||.|+++|+||+|.+.
T Consensus 16 ~~~~~~v~~~~~~g~~~~~~~yp~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~ 95 (283)
T 3bjr_A 16 YFQGMQVIKQKLTATCAQLTGYLHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQ 95 (283)
T ss_dssp -CCSSEEEEEECTTSSCEEEEEEC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCS
T ss_pred CCCCcceEEeecCCCceeEEEecCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccc
Confidence 445567788877887666655533 256899999996521 11134888999999999999999999998873
Q ss_pred CCccccchHHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCCC--------------ccEEEEecc
Q 022960 90 GSFLYGNYRREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYND--------------ISIVINISG 149 (289)
Q Consensus 90 ~~~~~~~~~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~--------------v~~~v~~~~ 149 (289)
..+.....|+.++++++.+. +.++++|+|||+||.+|+.++..+|+ ++++|+++|
T Consensus 96 -----~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p 170 (283)
T 3bjr_A 96 -----PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYP 170 (283)
T ss_dssp -----SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESC
T ss_pred -----cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCC
Confidence 11234456777777777653 23589999999999999999999875 889999988
Q ss_pred CCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhh
Q 022960 150 RFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED 229 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 229 (289)
..+....+.... ..+..... .....+.... ..++.+|+|+++|++|.++|++.
T Consensus 171 ~~~~~~~~~~~~----------~~~~~~~~---------------~~~~~~~~~~--~~~~~~P~lii~G~~D~~~p~~~ 223 (283)
T 3bjr_A 171 VISPLLGFPKDD----------ATLATWTP---------------TPNELAADQH--VNSDNQPTFIWTTADDPIVPATN 223 (283)
T ss_dssp CCCTTSBC------------------CCCC---------------CGGGGCGGGS--CCTTCCCEEEEEESCCTTSCTHH
T ss_pred cccccccccccc----------chHHHHHH---------------HhHhcCHHHh--ccCCCCCEEEEEcCCCCCCChHH
Confidence 765432211000 00000000 0000001111 12347899999999999999999
Q ss_pred HHHHHhhCC----CcEEEEEcCCCcccc-cC-------------chHHHHHHHHHHHhh
Q 022960 230 ALEFDKFIP----NHKLHIIEGADHEFT-SH-------------QDELASLVIQFIKAN 270 (289)
Q Consensus 230 ~~~~~~~~~----~~~~~~~~~~gH~~~-~~-------------~~~~~~~i~~fl~~~ 270 (289)
++.+++.++ +++++++++++|.+. .. .+++.+.+.+||+++
T Consensus 224 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 224 TLAYATALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 888887765 359999999999754 22 267889999999763
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=194.20 Aligned_cols=229 Identities=13% Similarity=0.098 Sum_probs=144.2
Q ss_pred eEEEEEeec---CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH
Q 022960 34 KLVGILHET---GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 34 ~l~~~~~~~---~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 110 (289)
.+.++++.| ++.|+||++||++++. +..++..|+++||.|+++|++|+|.+........ .+|+.+++++
T Consensus 144 ~l~~~l~~P~~~~~~P~Vv~~hG~~~~~----~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~~~~----~~d~~~~~~~ 215 (422)
T 3k2i_A 144 RVRATLFLPPGPGPFPGIIDIFGIGGGL----LEYRASLLAGHGFATLALAYYNFEDLPNNMDNIS----LEYFEEAVCY 215 (422)
T ss_dssp TEEEEEEECSSSCCBCEEEEECCTTCSC----CCHHHHHHHTTTCEEEEEECSSSTTSCSSCSCEE----THHHHHHHHH
T ss_pred cEEEEEEcCCCCCCcCEEEEEcCCCcch----hHHHHHHHHhCCCEEEEEccCCCCCCCCCcccCC----HHHHHHHHHH
Confidence 466666544 3578999999998764 4556889999999999999999998876544333 5677888888
Q ss_pred HHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccc-ccccccccc
Q 022960 111 FCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDV-RNKKGKLEY 186 (289)
Q Consensus 111 l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 186 (289)
+.+. +.++++|+||||||.+|+.+|..+|+++++|++++............... ...+.. ..... ........+
T Consensus 216 l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~v~a~V~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~ 293 (422)
T 3k2i_A 216 MLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAINYKHSS-IPPLGY-DLRRIKVAFSGLVDI 293 (422)
T ss_dssp HHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSSEEEEEEESCCSBCCSSCEEETTEE-ECCCCB-CGGGCEECTTSCEEC
T ss_pred HHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcCccEEEEEcCcccccCCchhhcCCc-CCCccc-chhhcccCcchhHHH
Confidence 8776 45799999999999999999999999999999988753321110000000 000000 00000 000000000
Q ss_pred ccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhH-HHHHhhC----C-CcEEEEEcCCCcccc-------
Q 022960 187 RVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDA-LEFDKFI----P-NHKLHIIEGADHEFT------- 253 (289)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~----~-~~~~~~~~~~gH~~~------- 253 (289)
............... .....++++|+|+++|++|.++|.+.. +.+.+.+ . ++++++++++||.+.
T Consensus 294 ~~~~~~~~~~~~~~~--~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~p~~p~~ 371 (422)
T 3k2i_A 294 VDIRNALVGGYKNPS--MIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEPPYFPLC 371 (422)
T ss_dssp TTCBCCCTTGGGSTT--BCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCSTTCCCC
T ss_pred HHHHhhhhhcccccc--cccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECCCCCCcc
Confidence 000000000000000 011124589999999999999998754 4555443 2 389999999999962
Q ss_pred ----------------------cCchHHHHHHHHHHHhhcCCC
Q 022960 254 ----------------------SHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 254 ----------------------~~~~~~~~~i~~fl~~~~~~~ 274 (289)
..++++.+.+.+||++++...
T Consensus 372 ~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 372 PASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp CEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred hhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 124578999999999998754
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-28 Score=188.63 Aligned_cols=216 Identities=14% Similarity=0.079 Sum_probs=138.6
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeC
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S 125 (289)
++|||+||++++... |..+++.|.+ ||+|+++|+||||.|.......++.++++++.++++.+. +.++++|+|||
T Consensus 52 ~~lvllHG~~~~~~~--~~~l~~~L~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~--~~~~~~lvG~S 126 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSA--FRGWQERLGD-EVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHR--LTHDYALFGHS 126 (280)
T ss_dssp EEEEEECCTTCCGGG--GTTHHHHHCT-TEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTT--CSSSEEEEEET
T ss_pred ceEEEECCCCCChHH--HHHHHHhcCC-CceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCEEEEEeC
Confidence 789999999998854 8999999987 899999999999999877777788888999988888763 34689999999
Q ss_pred hhHHHHHHHHHhCCC-cc----EEEEeccCCccccc---ccccccchhHhhhhhcCcccccccccccccccChhhhhhhh
Q 022960 126 KGGNAVLLYASKYND-IS----IVINISGRFNLKRG---IEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL 197 (289)
Q Consensus 126 ~Gg~~a~~~a~~~p~-v~----~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (289)
|||.+|+.+|.++|+ +. .+++.++....... ........+...+.......................+...+
T Consensus 127 ~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (280)
T 3qmv_A 127 MGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADL 206 (280)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHH
Confidence 999999999999876 55 77776643321111 00011111111111110000000000000000111111111
Q ss_pred ccch-hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEcCCCccccc---CchHHHHHHHHHH
Q 022960 198 STDI-HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHEFTS---HQDELASLVIQFI 267 (289)
Q Consensus 198 ~~~~-~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~---~~~~~~~~i~~fl 267 (289)
.... .......++++|+|+++|++|.+++.+..+.+.+.+++ .+++++++ ||+.+. +++++.+.|.+||
T Consensus 207 ~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-gH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 207 RACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPG-NHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp HHHHTCCCCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEEE-ETTGGGSSHHHHHHHHHHHTTC
T ss_pred HHHHhccccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEecC-CCeEEcCchhHHHHHHHHHhhC
Confidence 0000 00011135689999999999999999999999999887 47777774 999654 3456777777664
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=183.94 Aligned_cols=239 Identities=17% Similarity=0.105 Sum_probs=149.0
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCC---CCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCC
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQ---STKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGS 91 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~ 91 (289)
....+++.+++.+| .+.++++.|. +.|+||++||++ ++... |..+++.|++. ||.|+++|+||+|++..+
T Consensus 45 ~~~~~~~~i~~~~g-~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~~--~~~~~~~la~~~g~~v~~~d~rg~g~~~~~ 121 (311)
T 2c7b_A 45 IAETRDVHIPVSGG-SIRARVYFPKKAAGLPAVLYYHGGGFVFGSIET--HDHICRRLSRLSDSVVVSVDYRLAPEYKFP 121 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSSCSSEEEEEEECCSTTTSCCTGG--GHHHHHHHHHHHTCEEEEECCCCTTTSCTT
T ss_pred cceEEEEEecCCCC-cEEEEEEecCCCCCCcEEEEECCCcccCCChhh--hHHHHHHHHHhcCCEEEEecCCCCCCCCCC
Confidence 45677888888877 7887766553 358999999998 66644 88899999886 999999999999987543
Q ss_pred ccccchHHHHHHHHHHHHHHHhc----CC--ceEEEEEeChhHHHHHHHHHhCCC-----ccEEEEeccCCccccccccc
Q 022960 92 FLYGNYRREAEDLRAIVQDFCAK----GR--VITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNLKRGIEGR 160 (289)
Q Consensus 92 ~~~~~~~~~~~d~~~~i~~l~~~----~~--~~~~l~G~S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~~~~~~~~ 160 (289)
...+|+.++++++.+. +. ++++|+|||+||.+|+.++..+|+ ++++|+++|..+........
T Consensus 122 -------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~ 194 (311)
T 2c7b_A 122 -------TAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTAS 194 (311)
T ss_dssp -------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHH
T ss_pred -------ccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccC
Confidence 3345666666666543 33 689999999999999999987653 89999999987632100000
Q ss_pred ccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhh--HHHHHhhCC
Q 022960 161 LGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED--ALEFDKFIP 238 (289)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~--~~~~~~~~~ 238 (289)
...+ .......+...........+................. ....-.|+|+++|++|.+++... .+.+.+...
T Consensus 195 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~l~~~~P~lii~G~~D~~~~~~~~~~~~l~~~g~ 269 (311)
T 2c7b_A 195 -LVEF-GVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLA---DLGGLPPALVVTAEYDPLRDEGELYAYKMKASGS 269 (311)
T ss_dssp -HHHH-HHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGS---CCTTCCCEEEEEETTCTTHHHHHHHHHHHHHTTC
T ss_pred -CccH-HHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccc---cccCCCcceEEEcCCCCchHHHHHHHHHHHHCCC
Confidence 0000 0000000000000000000000000000000000000 11112399999999999986442 244555556
Q ss_pred CcEEEEEcCCCccccc------CchHHHHHHHHHHHhhcC
Q 022960 239 NHKLHIIEGADHEFTS------HQDELASLVIQFIKANYQ 272 (289)
Q Consensus 239 ~~~~~~~~~~gH~~~~------~~~~~~~~i~~fl~~~~~ 272 (289)
++++++++|++|.+.. +.+++.+.+.+||++.+.
T Consensus 270 ~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 270 RAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 7899999999998652 236789999999998764
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=174.50 Aligned_cols=192 Identities=14% Similarity=0.129 Sum_probs=141.9
Q ss_pred eEEeeCCCCceEEEEEeec-CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEE--ccccCCCCCCCc----cccc
Q 022960 24 RVVIPNSHGEKLVGILHET-GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRF--DFSGNGESEGSF----LYGN 96 (289)
Q Consensus 24 ~~~~~~~~g~~l~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~--d~~G~G~s~~~~----~~~~ 96 (289)
+..+. .+|.+++++..+. +++|+||++||++++... |..+.+.|++ ||.|+++ |++|+|.+.... ....
T Consensus 17 e~~~~-~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~--~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~~~~~~~~~~~ 92 (226)
T 2h1i_A 17 NLYFQ-SNAMMKHVFQKGKDTSKPVLLLLHGTGGNELD--LLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFD 92 (226)
T ss_dssp CHHHH-HHSSSCEEEECCSCTTSCEEEEECCTTCCTTT--THHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEEC
T ss_pred eeeec-CCCceeEEecCCCCCCCcEEEEEecCCCChhH--HHHHHHHhcc-CceEEEecCcccCCcchhhccccCccCcC
Confidence 33444 3566777544443 368999999999999865 8899999988 8999999 999999875321 1123
Q ss_pred hHHH---HHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhh
Q 022960 97 YRRE---AEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRI 169 (289)
Q Consensus 97 ~~~~---~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
.... ++++.++++.+.+. +.++++++|||+||.+++.++..+|+ ++++|+++|.......
T Consensus 93 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------- 159 (226)
T 2h1i_A 93 EEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGM------------- 159 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSC-------------
T ss_pred hhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCcc-------------
Confidence 3333 44555555555443 44789999999999999999999998 9999999987543210
Q ss_pred hhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC----cEEEEE
Q 022960 170 KQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN----HKLHII 245 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~ 245 (289)
.....+++|+++++|++|.++|.+..+.+.+.+++ .++ .+
T Consensus 160 -----------------------------------~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~ 203 (226)
T 2h1i_A 160 -----------------------------------QLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HW 203 (226)
T ss_dssp -----------------------------------CCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EE
T ss_pred -----------------------------------ccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-Ee
Confidence 00012378999999999999999999988888763 455 99
Q ss_pred cCCCcccccCchHHHHHHHHHHHhhc
Q 022960 246 EGADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 246 ~~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
++++|.+. .+..+.+.+||++.+
T Consensus 204 ~~~gH~~~---~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 204 ENRGHQLT---MGEVEKAKEWYDKAF 226 (226)
T ss_dssp ESSTTSCC---HHHHHHHHHHHHHHC
T ss_pred CCCCCCCC---HHHHHHHHHHHHHhC
Confidence 99999973 566788899998753
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.6e-26 Score=170.41 Aligned_cols=178 Identities=17% Similarity=0.196 Sum_probs=139.4
Q ss_pred ecCCCcEEEEEcCCCCCCCCcchHHHHHHHHH--cCccEEEEccc-------------------cCCCCCCCccccchHH
Q 022960 41 ETGSKQLVIVCHGFQSTKDRIPMVNLAAALER--EGISAFRFDFS-------------------GNGESEGSFLYGNYRR 99 (289)
Q Consensus 41 ~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~~-------------------G~G~s~~~~~~~~~~~ 99 (289)
.++++|+||++||++++... |..+++.|++ .||.|+++|+| |+|.+. .....++.+
T Consensus 20 ~~~~~~~vv~lHG~~~~~~~--~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~ 96 (226)
T 3cn9_A 20 APNADACIIWLHGLGADRTD--FKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR-AIDEDQLNA 96 (226)
T ss_dssp CTTCCEEEEEECCTTCCGGG--GHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT-CBCHHHHHH
T ss_pred CCCCCCEEEEEecCCCChHH--HHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc-cccchhHHH
Confidence 34578999999999998854 8999999998 89999998766 555432 223445677
Q ss_pred HHHHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHH-hCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcc
Q 022960 100 EAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYAS-KYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFI 175 (289)
Q Consensus 100 ~~~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~-~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (289)
.++++.++++.+.+.+ .++++|+|||+||.+++.++. .+|+ ++++|+++|........
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~------------------ 158 (226)
T 3cn9_A 97 SADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL------------------ 158 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC------------------
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh------------------
Confidence 7888989998886543 358999999999999999999 9998 99999999865432110
Q ss_pred cccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcc
Q 022960 176 DVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHE 251 (289)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~ 251 (289)
. .....+++|+++++|++|.++|++.++.+.+.++ +++++.++ ++|.
T Consensus 159 ~----------------------------~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~ 209 (226)
T 3cn9_A 159 A----------------------------LDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHE 209 (226)
T ss_dssp C----------------------------CCTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSS
T ss_pred h----------------------------hcccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCC
Confidence 0 0002347899999999999999999998888876 58999999 9999
Q ss_pred cccCchHHHHHHHHHHHhhc
Q 022960 252 FTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 252 ~~~~~~~~~~~i~~fl~~~~ 271 (289)
+. .+..+.+.+||++++
T Consensus 210 ~~---~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 210 VS---LEEIHDIGAWLRKRL 226 (226)
T ss_dssp CC---HHHHHHHHHHHHHHC
T ss_pred cc---hhhHHHHHHHHHhhC
Confidence 74 345677889988753
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=191.04 Aligned_cols=229 Identities=16% Similarity=0.114 Sum_probs=143.0
Q ss_pred eEEEEEeec---CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH
Q 022960 34 KLVGILHET---GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 34 ~l~~~~~~~---~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 110 (289)
.+.++++.| ++.|+||++||+++.. +...++.|+++||.|+++|+||+|.+........ .+|+.+++++
T Consensus 160 ~l~~~l~~P~~~~~~P~Vv~lhG~~~~~----~~~~a~~La~~Gy~Vla~D~rG~~~~~~~~~~~~----~~d~~~a~~~ 231 (446)
T 3hlk_A 160 RVRGTLFLPPEPGPFPGIVDMFGTGGGL----LEYRASLLAGKGFAVMALAYYNYEDLPKTMETLH----LEYFEEAMNY 231 (446)
T ss_dssp TEEEEEEECSSSCCBCEEEEECCSSCSC----CCHHHHHHHTTTCEEEEECCSSSTTSCSCCSEEE----HHHHHHHHHH
T ss_pred eEEEEEEeCCCCCCCCEEEEECCCCcch----hhHHHHHHHhCCCEEEEeccCCCCCCCcchhhCC----HHHHHHHHHH
Confidence 466666544 3568999999998864 3445889999999999999999998876544333 5777888888
Q ss_pred HHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccc
Q 022960 111 FCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYR 187 (289)
Q Consensus 111 l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (289)
+... +.++++|+||||||.+|+.+|..+|+++++|++++.............. ....+................+.
T Consensus 232 l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~v~a~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 310 (446)
T 3hlk_A 232 LLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLRYKGE-TLPPVGVNRNRIKVTKDGYADIV 310 (446)
T ss_dssp HHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSCEEEEEEESCCSBCCSSEEEETTE-EECCCCBCGGGCEECSSSCEECT
T ss_pred HHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCCceEEEEEcCcccccCCCccccCc-cCCccccchhccccccchHHHHH
Confidence 8776 3479999999999999999999999999999998865432211100000 00000000000000000000000
Q ss_pred cChhhhhhhhcc-chhhhhcccccCceEEEEEeCCCCccChhhH-HHHHhhC-----CCcEEEEEcCCCcccc-------
Q 022960 188 VTQESLMDRLST-DIHAACHMICQDCRVLTIHGTKDKMVPAEDA-LEFDKFI-----PNHKLHIIEGADHEFT------- 253 (289)
Q Consensus 188 ~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~-----~~~~~~~~~~~gH~~~------- 253 (289)
..+...... .........++++|+|+++|++|.++|.+.. +.+.+.+ +++++++++++||.+.
T Consensus 311 ---~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~p~~P~~ 387 (446)
T 3hlk_A 311 ---DVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPPYFPLC 387 (446)
T ss_dssp ---TCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCSTTCCCC
T ss_pred ---HHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECCCCCCCC
Confidence 000000000 0000011224589999999999999998433 4555443 2389999999999972
Q ss_pred ----------------------cCchHHHHHHHHHHHhhcCCC
Q 022960 254 ----------------------SHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 254 ----------------------~~~~~~~~~i~~fl~~~~~~~ 274 (289)
...+++++.+.+||++++...
T Consensus 388 ~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 388 RASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp CBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred hhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 013568999999999998654
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-26 Score=170.17 Aligned_cols=177 Identities=16% Similarity=0.123 Sum_probs=136.8
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHH--cCccEEEEccc-------------------cCCCCCCCccccchHHHH
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALER--EGISAFRFDFS-------------------GNGESEGSFLYGNYRREA 101 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~--~G~~v~~~d~~-------------------G~G~s~~~~~~~~~~~~~ 101 (289)
+++|+||++||++++... |..+.+.|++ .||.|+++|+| |+|.+. .....++.+.+
T Consensus 12 ~~~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~~~ 88 (218)
T 1auo_A 12 PADACVIWLHGLGADRYD--FMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR-SISLEELEVSA 88 (218)
T ss_dssp CCSEEEEEECCTTCCTTT--THHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC-EECHHHHHHHH
T ss_pred CCCcEEEEEecCCCChhh--HHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccc-ccchHHHHHHH
Confidence 367899999999998865 8999999998 89999998765 455432 22234567778
Q ss_pred HHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHH-hCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccc
Q 022960 102 EDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYAS-KYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDV 177 (289)
Q Consensus 102 ~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~-~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (289)
+++.++++++.+.+ .++++++|||+||.+++.++. ++|+ ++++|+++|.... ..+ ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~-~~~-----------------~~- 149 (218)
T 1auo_A 89 KMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT-FGD-----------------EL- 149 (218)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT-CCT-----------------TC-
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC-chh-----------------hh-
Confidence 88999998886543 348999999999999999999 9998 9999999987553 000 00
Q ss_pred cccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcccc
Q 022960 178 RNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEFT 253 (289)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~ 253 (289)
. .....+++|+++++|++|.++|.+.++.+.+.++ ++++++++ +||.+.
T Consensus 150 ---------~-----------------~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~ 202 (218)
T 1auo_A 150 ---------E-----------------LSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVL 202 (218)
T ss_dssp ---------C-----------------CCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCC
T ss_pred ---------h-----------------hhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccC
Confidence 0 0001347899999999999999999999888876 48999999 999974
Q ss_pred cCchHHHHHHHHHHHhhc
Q 022960 254 SHQDELASLVIQFIKANY 271 (289)
Q Consensus 254 ~~~~~~~~~i~~fl~~~~ 271 (289)
.+..+.+.+||.+.+
T Consensus 203 ---~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 203 ---PQEIHDIGAWLAARL 217 (218)
T ss_dssp ---HHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHh
Confidence 344667888887764
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=202.34 Aligned_cols=229 Identities=14% Similarity=0.099 Sum_probs=163.7
Q ss_pred ceeeEEeeCCCC-ceEEEEEeecC------CCcEEEEEcCCCCCCCC-cchH-----HHHHHHHHcCccEEEEccccCCC
Q 022960 21 QRRRVVIPNSHG-EKLVGILHETG------SKQLVIVCHGFQSTKDR-IPMV-----NLAAALEREGISAFRFDFSGNGE 87 (289)
Q Consensus 21 ~~~~~~~~~~~g-~~l~~~~~~~~------~~~~iv~~hG~~~~~~~-~~~~-----~~~~~l~~~G~~v~~~d~~G~G~ 87 (289)
..+.+.+++.+| .++.++++.|. +.|+||++||+++.... ..|. .+++.|+++||.|+++|+||+|.
T Consensus 486 ~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~ 565 (741)
T 2ecf_A 486 PVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPR 565 (741)
T ss_dssp CEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSS
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCC
Confidence 567888998899 99999887543 35789999999877411 1133 68899999999999999999999
Q ss_pred CCCCcccc---ch-HHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc
Q 022960 88 SEGSFLYG---NY-RREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG 159 (289)
Q Consensus 88 s~~~~~~~---~~-~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~ 159 (289)
+....... .+ ....+|+.++++++.++ +.++++++|||+||.+++.++..+|+ ++++|+++|..+....
T Consensus 566 s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~--- 642 (741)
T 2ecf_A 566 RGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLY--- 642 (741)
T ss_dssp SCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGS---
T ss_pred CChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhh---
Confidence 76433211 11 23478999999999776 35689999999999999999999998 9999999987654311
Q ss_pred cccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC
Q 022960 160 RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN 239 (289)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 239 (289)
...+......... .....+. ..+...... ++++|+|+++|++|..+|++.++.+++.+++
T Consensus 643 --~~~~~~~~~~~~~-------------~~~~~~~---~~~~~~~~~--~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~ 702 (741)
T 2ecf_A 643 --DSHYTERYMDLPA-------------RNDAGYR---EARVLTHIE--GLRSPLLLIHGMADDNVLFTNSTSLMSALQK 702 (741)
T ss_dssp --BHHHHHHHHCCTG-------------GGHHHHH---HHCSGGGGG--GCCSCEEEEEETTCSSSCTHHHHHHHHHHHH
T ss_pred --ccccchhhcCCcc-------------cChhhhh---hcCHHHHHh--hCCCCEEEEccCCCCCCCHHHHHHHHHHHHH
Confidence 1111111100000 0001110 011111122 4578999999999999999999888887643
Q ss_pred ----cEEEEEcCCCccccc-CchHHHHHHHHHHHhhcC
Q 022960 240 ----HKLHIIEGADHEFTS-HQDELASLVIQFIKANYQ 272 (289)
Q Consensus 240 ----~~~~~~~~~gH~~~~-~~~~~~~~i~~fl~~~~~ 272 (289)
.+++++++++|.+.. .++++.+.+.+||+++++
T Consensus 703 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 703 RGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRCLK 740 (741)
T ss_dssp TTCCCEEEEETTCCSSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEECCCCCCCCCCchhHHHHHHHHHHHHhcC
Confidence 599999999999763 347899999999998864
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-26 Score=175.42 Aligned_cols=176 Identities=14% Similarity=0.154 Sum_probs=137.1
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEE--ccccCCCCCCCc-------cccchHHHHHHHHHHHHHHHh
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRF--DFSGNGESEGSF-------LYGNYRREAEDLRAIVQDFCA 113 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~--d~~G~G~s~~~~-------~~~~~~~~~~d~~~~i~~l~~ 113 (289)
+++|+||++||++++.. .|..+++.|++. |.|+++ |++|+|.|.... ....+...++|+.++++++.+
T Consensus 60 ~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~-~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 136 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN--QFFDFGARLLPQ-ATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANRE 136 (251)
T ss_dssp TTSCEEEEECCTTCCHH--HHHHHHHHHSTT-SEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh--HHHHHHHhcCCC-ceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 37899999999999885 488899999875 999999 899999775321 112334456777777777755
Q ss_pred c-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChh
Q 022960 114 K-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQE 191 (289)
Q Consensus 114 ~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (289)
. +.++++|+|||+||.+++.++..+|+ ++++|+++|......
T Consensus 137 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------------------ 180 (251)
T 2r8b_A 137 HYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------------------ 180 (251)
T ss_dssp HHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC------------------------------------
T ss_pred ccCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc------------------------------------
Confidence 4 67899999999999999999999998 999999998754321
Q ss_pred hhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC--CcEEE-EEcCCCcccccCchHHHHHHHHHHH
Q 022960 192 SLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP--NHKLH-IIEGADHEFTSHQDELASLVIQFIK 268 (289)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~-~~~~~gH~~~~~~~~~~~~i~~fl~ 268 (289)
......+++|+|+++|++|.++|.+.++.+.+.++ +.++. .++++||.+. .+..+.+.+||+
T Consensus 181 ------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~l~ 245 (251)
T 2r8b_A 181 ------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPGGHEIR---SGEIDAVRGFLA 245 (251)
T ss_dssp ------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESSCSSCC---HHHHHHHHHHHG
T ss_pred ------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEecCCCCccC---HHHHHHHHHHHH
Confidence 00001237899999999999999999999999887 56665 7888999974 345677889998
Q ss_pred hhcC
Q 022960 269 ANYQ 272 (289)
Q Consensus 269 ~~~~ 272 (289)
+.+.
T Consensus 246 ~~l~ 249 (251)
T 2r8b_A 246 AYGG 249 (251)
T ss_dssp GGC-
T ss_pred HhcC
Confidence 8764
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=195.77 Aligned_cols=235 Identities=15% Similarity=0.181 Sum_probs=164.0
Q ss_pred eeeEEeeCCCCceEEEEEeecC----------CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEcccc---CCCC
Q 022960 22 RRRVVIPNSHGEKLVGILHETG----------SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSG---NGES 88 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~----------~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G---~G~s 88 (289)
.+.+.+...+|.++.++++.|. +.|+||++||+++......|..+.+.|+++||.|+++|+|| ||.+
T Consensus 391 ~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~ 470 (662)
T 3azo_A 391 PQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRA 470 (662)
T ss_dssp CEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHH
T ss_pred ceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHH
Confidence 5677888889999998877542 35899999999877653357888999999999999999999 7665
Q ss_pred CCCccccch-HHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc---cc
Q 022960 89 EGSFLYGNY-RREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE---GR 160 (289)
Q Consensus 89 ~~~~~~~~~-~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~---~~ 160 (289)
........+ ....+|+.++++++.++ +.++++|+|||+||++++.++.. |+ ++++|+++|..+...... ..
T Consensus 471 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~ 549 (662)
T 3azo_A 471 YRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGGTHD 549 (662)
T ss_dssp HHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTCSCG
T ss_pred HHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcccccc
Confidence 322111111 23367888888888776 56699999999999999998886 77 999999998766432211 00
Q ss_pred ccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc
Q 022960 161 LGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH 240 (289)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 240 (289)
....+....... .....+.+.. ........ ++++|+|+++|++|.++|++.++.+++.+++.
T Consensus 550 ~~~~~~~~~~~~-------------~~~~~~~~~~---~sp~~~~~--~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~ 611 (662)
T 3azo_A 550 FESRYLDFLIGS-------------FEEFPERYRD---RAPLTRAD--RVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGC 611 (662)
T ss_dssp GGTTHHHHHTCC-------------TTTCHHHHHH---TCGGGGGG--GCCSCEEEEEETTCSSSCTHHHHHHHHHHTTS
T ss_pred hhhHhHHHHhCC-------------CccchhHHHh---hChHhHhc--cCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHc
Confidence 000111110000 0000111111 11111222 45789999999999999999999999888754
Q ss_pred ----EEEEEcCCCcccc--cCchHHHHHHHHHHHhhcCCCC
Q 022960 241 ----KLHIIEGADHEFT--SHQDELASLVIQFIKANYQKDG 275 (289)
Q Consensus 241 ----~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~~~~~~ 275 (289)
++++++++||.+. ....++.+.+.+||.+++....
T Consensus 612 g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~ 652 (662)
T 3azo_A 612 GVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVEV 652 (662)
T ss_dssp CCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999864 3346899999999999986543
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=181.20 Aligned_cols=237 Identities=14% Similarity=0.056 Sum_probs=149.9
Q ss_pred cccceeeEEeeCCCCc-eEEEEEeec----CCCcEEEEEcCCC---CCCCCcchHHHHHHHHHc-CccEEEEccccCCCC
Q 022960 18 PVVQRRRVVIPNSHGE-KLVGILHET----GSKQLVIVCHGFQ---STKDRIPMVNLAAALERE-GISAFRFDFSGNGES 88 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~-~l~~~~~~~----~~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s 88 (289)
.++..+++++++.+|. .+.++++.| ++.|+||++||++ ++.. .|..++..|++. ||.|+++|+||+|++
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~--~~~~~~~~la~~~G~~Vv~~d~rg~~~~ 124 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAE--SSDPFCVEVARELGFAVANVEYRLAPET 124 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGG--GGHHHHHHHHHHHCCEEEEECCCCTTTS
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChh--hhHHHHHHHHHhcCcEEEEecCCCCCCC
Confidence 4667888999988886 677776654 2568999999998 5554 377888888874 999999999999987
Q ss_pred CCCccccchHHHHHHHHHHHHHHHhc----C--CceEEEEEeChhHHHHHHHHHhCC-----CccEEEEeccCCcccccc
Q 022960 89 EGSFLYGNYRREAEDLRAIVQDFCAK----G--RVITAIIGHSKGGNAVLLYASKYN-----DISIVINISGRFNLKRGI 157 (289)
Q Consensus 89 ~~~~~~~~~~~~~~d~~~~i~~l~~~----~--~~~~~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~~~~~~~ 157 (289)
..+ ...+|+.++++++.+. + .++++|+|||+||.+++.++...+ .++++|+++|..+.....
T Consensus 125 ~~~-------~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~ 197 (323)
T 1lzl_A 125 TFP-------GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLET 197 (323)
T ss_dssp CTT-------HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCS
T ss_pred CCC-------chHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCc
Confidence 533 3356666677766542 2 368999999999999999988754 399999999977653221
Q ss_pred cccc--------cchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccC--h
Q 022960 158 EGRL--------GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVP--A 227 (289)
Q Consensus 158 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~ 227 (289)
.... ........... +........ .......... ... .......+|+|+++|++|.+++ .
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~s-p~~--~~~~~~~~P~li~~G~~D~~~~~~~ 267 (323)
T 1lzl_A 198 VSMTNFVDTPLWHRPNAILSWKY-YLGESYSGP------EDPDVSIYAA-PSR--ATDLTGLPPTYLSTMELDPLRDEGI 267 (323)
T ss_dssp HHHHHCSSCSSCCHHHHHHHHHH-HHCTTCCCT------TCSCCCTTTC-GGG--CSCCTTCCCEEEEEETTCTTHHHHH
T ss_pred hhHHHhccCCCCCHHHHHHHHHH-hCCCCcccc------cccCCCcccC-ccc--CcccCCCChhheEECCcCCchHHHH
Confidence 1000 00000000000 000000000 0000000000 000 0011113799999999999884 1
Q ss_pred hhHHHHHhhCCCcEEEEEcCCCcccccC-----chHHHHHHHHHHHhhcCC
Q 022960 228 EDALEFDKFIPNHKLHIIEGADHEFTSH-----QDELASLVIQFIKANYQK 273 (289)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----~~~~~~~i~~fl~~~~~~ 273 (289)
...+.+.+...++++++++|++|.+... .+++.+.+.+||++.+..
T Consensus 268 ~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 318 (323)
T 1lzl_A 268 EYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRS 318 (323)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhcc
Confidence 2233444444578999999999986422 357899999999998754
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=194.67 Aligned_cols=243 Identities=15% Similarity=0.077 Sum_probs=166.2
Q ss_pred cccceeeEEeeCCCCceEEEEEeec------CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHET------GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~------~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 91 (289)
..+..+++.+++.||.++.++++.| ++.|+||++||+++......|......|+++||.|+++|+||+|.+...
T Consensus 413 ~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~ 492 (695)
T 2bkl_A 413 EQYQVEQVFYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKA 492 (695)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHH
T ss_pred HHCeEEEEEEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHH
Confidence 3466788899999999999887644 2578999999977665433355556678888999999999999877532
Q ss_pred cc----ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc
Q 022960 92 FL----YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL 163 (289)
Q Consensus 92 ~~----~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~ 163 (289)
.. ........+|+.++++++.++ +.++++++|+|+||++++.++.++|+ ++++|+.+|..++..........
T Consensus 493 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~ 572 (695)
T 2bkl_A 493 WHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGR 572 (695)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGG
T ss_pred HHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCc
Confidence 11 112244568999999999776 35689999999999999999999999 99999999987654321111111
Q ss_pred hhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC----
Q 022960 164 GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN---- 239 (289)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---- 239 (289)
.+...+ . . ....+.+..............+...+|+|+++|++|..+|+..++++++.++.
T Consensus 573 ~~~~~~-----g---~-------~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~ 637 (695)
T 2bkl_A 573 TWIPEY-----G---T-------AEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGN 637 (695)
T ss_dssp GGHHHH-----C---C-------TTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTC
T ss_pred chHHHh-----C---C-------CCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccC
Confidence 111100 0 0 00111111111111112222222236999999999999999999888877643
Q ss_pred ---cEEEEEcCCCccccc---CchHHHHHHHHHHHhhcCCCC
Q 022960 240 ---HKLHIIEGADHEFTS---HQDELASLVIQFIKANYQKDG 275 (289)
Q Consensus 240 ---~~~~~~~~~gH~~~~---~~~~~~~~i~~fl~~~~~~~~ 275 (289)
+++++++++||.+.. ...+....+.+||.+++....
T Consensus 638 ~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 679 (695)
T 2bkl_A 638 PATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLDVQG 679 (695)
T ss_dssp CSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 789999999999742 345678889999999987543
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-26 Score=199.16 Aligned_cols=228 Identities=14% Similarity=0.122 Sum_probs=160.2
Q ss_pred ceeeEEeeCCCC-ceEEEEEeecC------CCcEEEEEcCCCCCCCC-cchHH----HHHHHHHcCccEEEEccccCCCC
Q 022960 21 QRRRVVIPNSHG-EKLVGILHETG------SKQLVIVCHGFQSTKDR-IPMVN----LAAALEREGISAFRFDFSGNGES 88 (289)
Q Consensus 21 ~~~~~~~~~~~g-~~l~~~~~~~~------~~~~iv~~hG~~~~~~~-~~~~~----~~~~l~~~G~~v~~~d~~G~G~s 88 (289)
..+.+.+...+| .++.++++.|. +.|+||++||++..... ..|.. +++.|+++||.|+++|+||+|.+
T Consensus 454 ~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s 533 (706)
T 2z3z_A 454 EIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANR 533 (706)
T ss_dssp CEEEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSS
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCccc
Confidence 345778888889 89998877543 34799999998766521 12443 68899999999999999999988
Q ss_pred CCCcccc---ch-HHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc
Q 022960 89 EGSFLYG---NY-RREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR 160 (289)
Q Consensus 89 ~~~~~~~---~~-~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~ 160 (289)
....... .+ ....+|+.++++++.+. +.++++|+||||||++++.++.++|+ ++++|+++|..+....
T Consensus 534 ~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~---- 609 (706)
T 2z3z_A 534 GAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRY---- 609 (706)
T ss_dssp CHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGS----
T ss_pred chhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHH----
Confidence 6543211 11 34468999999998765 35689999999999999999999999 9999999987654311
Q ss_pred ccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC--
Q 022960 161 LGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP-- 238 (289)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 238 (289)
...+...+.... . .....+.. .+...... ++++|+|+++|++|.++|++.++.+.+.++
T Consensus 610 -~~~~~~~~~~~~-----~--------~~~~~~~~---~~~~~~~~--~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~ 670 (706)
T 2z3z_A 610 -AIMYGERYFDAP-----Q--------ENPEGYDA---ANLLKRAG--DLKGRLMLIHGAIDPVVVWQHSLLFLDACVKA 670 (706)
T ss_dssp -BHHHHHHHHCCT-----T--------TCHHHHHH---HCGGGGGG--GCCSEEEEEEETTCSSSCTHHHHHHHHHHHHH
T ss_pred -HhhhhhhhcCCc-----c--------cChhhhhh---CCHhHhHH--hCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHC
Confidence 111111111000 0 00111110 11111122 457999999999999999999988887764
Q ss_pred --CcEEEEEcCCCccccc-CchHHHHHHHHHHHhhc
Q 022960 239 --NHKLHIIEGADHEFTS-HQDELASLVIQFIKANY 271 (289)
Q Consensus 239 --~~~~~~~~~~gH~~~~-~~~~~~~~i~~fl~~~~ 271 (289)
+.++.++++++|.+.. .++++.+.+.+||++++
T Consensus 671 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 671 RTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTDHL 706 (706)
T ss_dssp TCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHHhC
Confidence 3699999999999764 45789999999998764
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-26 Score=181.47 Aligned_cols=241 Identities=13% Similarity=0.084 Sum_probs=146.8
Q ss_pred cccceeeEEeeCCCCceEEEEEeec-----CCCcEEEEEcCCCCCC---CCcchHHHHHHHH-HcCccEEEEccccCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHET-----GSKQLVIVCHGFQSTK---DRIPMVNLAAALE-REGISAFRFDFSGNGES 88 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~-----~~~~~iv~~hG~~~~~---~~~~~~~~~~~l~-~~G~~v~~~d~~G~G~s 88 (289)
.++..+++.+...++..+..+.-.. ++.|+||++||++... ....|..++..|+ +.||.|+++|+||++++
T Consensus 51 ~~v~~~~v~~~~~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~ 130 (338)
T 2o7r_A 51 SPVLTKDLALNPLHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEH 130 (338)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTT
T ss_pred CCEEEEEEEecCCCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCC
Confidence 4577888888765554444332221 3568999999987432 2223788889998 67999999999998765
Q ss_pred CCCccccchHHHHHHHHHHHHHHHhc---------CCceEEEEEeChhHHHHHHHHHhCCC---------ccEEEEeccC
Q 022960 89 EGSFLYGNYRREAEDLRAIVQDFCAK---------GRVITAIIGHSKGGNAVLLYASKYND---------ISIVINISGR 150 (289)
Q Consensus 89 ~~~~~~~~~~~~~~d~~~~i~~l~~~---------~~~~~~l~G~S~Gg~~a~~~a~~~p~---------v~~~v~~~~~ 150 (289)
. +....+|+.++++++... +.++++|+|||+||.+|+.+|.++|+ ++++|+++|.
T Consensus 131 ~-------~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~ 203 (338)
T 2o7r_A 131 R-------LPAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPG 203 (338)
T ss_dssp C-------TTHHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCC
T ss_pred C-------CchHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCc
Confidence 3 235578888889888764 33689999999999999999988753 8999999987
Q ss_pred Ccccccccccc--------cchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCC
Q 022960 151 FNLKRGIEGRL--------GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKD 222 (289)
Q Consensus 151 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 222 (289)
+.......... .......+.............. .... +............. .+.+|+|+++|++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~l~--~~~~P~Lvi~G~~D 276 (338)
T 2o7r_A 204 FGGSKRTGSELRLANDSRLPTFVLDLIWELSLPMGADRDHE---YCNP--TAESEPLYSFDKIR--SLGWRVMVVGCHGD 276 (338)
T ss_dssp CCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHSCTTCCTTST---TTCC--C----CCTHHHHHH--HHTCEEEEEEETTS
T ss_pred cCCCcCChhhhccCCCcccCHHHHHHHHHHhCCCCCCCCCc---ccCC--CCCCcccccHhhhc--CCCCCEEEEECCCC
Confidence 65432211100 0000000000000000000000 0000 00000000001111 23669999999999
Q ss_pred CccChh--hHHHHHhhCCCcEEEEEcCCCcccc-cCc---hHHHHHHHHHHHhhcC
Q 022960 223 KMVPAE--DALEFDKFIPNHKLHIIEGADHEFT-SHQ---DELASLVIQFIKANYQ 272 (289)
Q Consensus 223 ~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~-~~~---~~~~~~i~~fl~~~~~ 272 (289)
.+++.. ..+.+.+..+++++++++++||.+. .++ +++.+.|.+||++.+.
T Consensus 277 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~ 332 (338)
T 2o7r_A 277 PMIDRQMELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCT 332 (338)
T ss_dssp TTHHHHHHHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC----
T ss_pred cchHHHHHHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhcc
Confidence 998743 2445555556789999999999865 344 6789999999987654
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.5e-26 Score=184.23 Aligned_cols=231 Identities=12% Similarity=0.023 Sum_probs=150.4
Q ss_pred CCCceEEEEEeec--CCCcEEEEEcCCCCCCCCcchHHHHHHHHH------cCccEEEEccccCCCCCCCc--cccchHH
Q 022960 30 SHGEKLVGILHET--GSKQLVIVCHGFQSTKDRIPMVNLAAALER------EGISAFRFDFSGNGESEGSF--LYGNYRR 99 (289)
Q Consensus 30 ~~g~~l~~~~~~~--~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~------~G~~v~~~d~~G~G~s~~~~--~~~~~~~ 99 (289)
.+|.++++...++ +++++|||+||++++.. .|..+++.|.+ .||+|+++|+||||.|+.+. ...++..
T Consensus 92 i~g~~i~~~~~~~~~~~~~pllllHG~~~s~~--~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~~~~~~~ 169 (408)
T 3g02_A 92 IEGLTIHFAALFSEREDAVPIALLHGWPGSFV--EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMD 169 (408)
T ss_dssp ETTEEEEEEEECCSCTTCEEEEEECCSSCCGG--GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSSCCCHHH
T ss_pred ECCEEEEEEEecCCCCCCCeEEEECCCCCcHH--HHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCCCCCHHH
Confidence 3799999877665 36789999999999985 48999999998 48999999999999998765 4567888
Q ss_pred HHHHHHHHHHHHHhcCCc-eEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccc--cccccccch---hHhh---hh
Q 022960 100 EAEDLRAIVQDFCAKGRV-ITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKR--GIEGRLGLG---YLQR---IK 170 (289)
Q Consensus 100 ~~~d~~~~i~~l~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~--~~~~~~~~~---~~~~---~~ 170 (289)
.++++.++++.+ +.+ +++++||||||.+++.+|.++|++.++++..+...... .....+... .... +.
T Consensus 170 ~a~~~~~l~~~l---g~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~~ 246 (408)
T 3g02_A 170 NARVVDQLMKDL---GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPEGPSIESLSAAEKEGIARMEKFM 246 (408)
T ss_dssp HHHHHHHHHHHT---TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTTCCCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh---CCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCcccccccCCCHHHHHHHHHHHHHH
Confidence 999999999987 776 89999999999999999999988555555433222110 000000000 0000 00
Q ss_pred h--------------------------------cCcccccccccccccccChhhhhhh----------------hccchh
Q 022960 171 Q--------------------------------NGFIDVRNKKGKLEYRVTQESLMDR----------------LSTDIH 202 (289)
Q Consensus 171 ~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ 202 (289)
. ..+..+... ....+.+... +.....
T Consensus 247 ~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~------~~~~d~ll~~v~~y~~t~~~~~s~~~y~e~~~ 320 (408)
T 3g02_A 247 TDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDK------PLPSETILEMVSLYWLTESFPRAIHTYREWVP 320 (408)
T ss_dssp HHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSS------CCCHHHHHHHHHHHHHTTHHHHHGGGHHHHTT
T ss_pred HhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCC------CCCHHHHHHHHHHHHhhccchhHHHHHHhhcc
Confidence 0 000000000 1111111110 000000
Q ss_pred hh-h--------cccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcC
Q 022960 203 AA-C--------HMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 203 ~~-~--------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~ 272 (289)
.. . ....+++|+++++|.+|...+++...+.. .+.+.+..++++||+.+ ++|+.+++.|.+||.+...
T Consensus 321 ~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~~~~~~~--~~~~~~~~~~~gGHf~~lE~Pe~~~~~l~~fl~~~~~ 398 (408)
T 3g02_A 321 TASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPRSWIATT--GNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQVWQ 398 (408)
T ss_dssp C-------CTTTTTTCEEEEEEEEECTBSSSCCCHHHHGGG--EEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHHC-
T ss_pred cccccccccccccCCCcCCCEEEEeCCcccccCcHHHHHhc--CCeeEEEECCCCcCchhhhCHHHHHHHHHHHHHHHHH
Confidence 00 0 12346899999999999776665433222 23367889999999965 8889999999999987654
Q ss_pred C
Q 022960 273 K 273 (289)
Q Consensus 273 ~ 273 (289)
.
T Consensus 399 ~ 399 (408)
T 3g02_A 399 K 399 (408)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-26 Score=167.85 Aligned_cols=177 Identities=14% Similarity=0.179 Sum_probs=125.7
Q ss_pred CcEEEEEcCCCCCCCCcchHHHH-HHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEE
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLA-AALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIG 123 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G 123 (289)
.|+||++||++++... .|.... ..|++.||.|+++|+| .+..+ ++.++++++.++++.+ .++++++|
T Consensus 4 ~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~---~~~~~----~~~~~~~~~~~~~~~~----~~~~~l~G 71 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTN-HWFPWLKKRLLADGVQADILNMP---NPLQP----RLEDWLDTLSLYQHTL----HENTYLVA 71 (192)
T ss_dssp CCEEEEECCTTCCTTS-TTHHHHHHHHHHTTCEEEEECCS---CTTSC----CHHHHHHHHHTTGGGC----CTTEEEEE
T ss_pred CCEEEEEcCCCCCcch-hHHHHHHHHHHhCCcEEEEecCC---CCCCC----CHHHHHHHHHHHHHhc----cCCEEEEE
Confidence 4569999999998862 266666 4688889999999999 22221 5677777777777654 45799999
Q ss_pred eChhHHHHHHHHHhCCC---ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccc
Q 022960 124 HSKGGNAVLLYASKYND---ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTD 200 (289)
Q Consensus 124 ~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (289)
||+||.+++.++.++|+ ++++|++++.......+.. + ..+.. .. .+
T Consensus 72 ~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~~---------~--~~~~~---------~~-----------~~ 120 (192)
T 1uxo_A 72 HSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQM---------L--DEFTQ---------GS-----------FD 120 (192)
T ss_dssp ETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGG---------G--GGGTC---------SC-----------CC
T ss_pred eCccHHHHHHHHHHhcccCCccEEEEeccCCCccccchh---------h--hhhhh---------cC-----------CC
Confidence 99999999999999885 8999999986543221100 0 00000 00 00
Q ss_pred hhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchH---HHHHHHHHHH
Q 022960 201 IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDE---LASLVIQFIK 268 (289)
Q Consensus 201 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~---~~~~i~~fl~ 268 (289)
. .... ++++|+++++|++|.++|.+.++.+.+.+ +++++.++++||.++ +.+++ +.+.+.+|++
T Consensus 121 ~-~~~~--~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~ 188 (192)
T 1uxo_A 121 H-QKII--ESAKHRAVIASKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFS 188 (192)
T ss_dssp H-HHHH--HHEEEEEEEEETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHH
T ss_pred H-HHHH--hhcCCEEEEecCCCCcCCHHHHHHHHHhc-CceEEEeCCCcCcccccccccHHHHHHHHHHHHH
Confidence 1 1111 33689999999999999999999999999 999999999999976 43333 3444444443
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=164.84 Aligned_cols=170 Identities=14% Similarity=0.066 Sum_probs=131.1
Q ss_pred ecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEE
Q 022960 41 ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITA 120 (289)
Q Consensus 41 ~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 120 (289)
..+++++||++||++++... .|......+.. .++.+|++|++. .++.++++++.++++.+ + ++++
T Consensus 13 ~~g~~~~vv~~HG~~~~~~~-~~~~~~~~~~~---~~~~v~~~~~~~-------~~~~~~~~~~~~~~~~~---~-~~~~ 77 (191)
T 3bdv_A 13 EVSQQLTMVLVPGLRDSDDE-HWQSHWERRFP---HWQRIRQREWYQ-------ADLDRWVLAIRRELSVC---T-QPVI 77 (191)
T ss_dssp HHHTTCEEEEECCTTCCCTT-SHHHHHHHHCT---TSEECCCSCCSS-------CCHHHHHHHHHHHHHTC---S-SCEE
T ss_pred CCCCCceEEEECCCCCCchh-hHHHHHHHhcC---CeEEEeccCCCC-------cCHHHHHHHHHHHHHhc---C-CCeE
Confidence 34578999999999988743 36555444322 457788888752 35677888888888765 4 6899
Q ss_pred EEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhcc
Q 022960 121 IIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST 199 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (289)
++|||+||.+++.++.++|+ ++++|+++|.......+.. .
T Consensus 78 l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-------------------------------~-------- 118 (191)
T 3bdv_A 78 LIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEIDD-------------------------------R-------- 118 (191)
T ss_dssp EEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGTCTT-------------------------------T--------
T ss_pred EEEEChHHHHHHHHHHhcCCCccEEEEECCCccccccCcc-------------------------------c--------
Confidence 99999999999999999998 9999999987553311000 0
Q ss_pred chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCccccc----CchHHHHHHHHHHHhh
Q 022960 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTS----HQDELASLVIQFIKAN 270 (289)
Q Consensus 200 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~i~~fl~~~ 270 (289)
....++++|+++++|++|.++|++.++.+.+.+ +++++.++++||.++. +.++..+.|.+||++.
T Consensus 119 -----~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 187 (191)
T 3bdv_A 119 -----IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEIL 187 (191)
T ss_dssp -----SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTT
T ss_pred -----cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHh
Confidence 111245899999999999999999999998887 8999999999999764 4466669999999876
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.9e-25 Score=173.58 Aligned_cols=229 Identities=14% Similarity=0.064 Sum_probs=149.8
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCC---CCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQ---STKDRIPMVNLAAALERE-GISAFRFDFSGNGESEG 90 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~ 90 (289)
..+..+++.++..+| .+.++++.|. +.|+||++||++ ++... |..+++.|++. ||.|+++|+||+|++..
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~~--~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~ 137 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKTQGPYGVLVYYHGGGFVLGDIES--YDPLCRAITNSCQCVTISVDYRLAPENKF 137 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSSCSCCCEEEEECCSTTTSCCTTT--THHHHHHHHHHHTSEEEEECCCCTTTSCT
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCCCCCCcEEEEECCCccccCChHH--HHHHHHHHHHhcCCEEEEecCCCCCCCCC
Confidence 456778888988777 7877766543 568999999955 55543 88899999864 99999999999998753
Q ss_pred CccccchHHHHHHHHHHHHHHHhc-----CCceEEEEEeChhHHHHHHHHHhCCC-c---cEEEEeccCCcccccccccc
Q 022960 91 SFLYGNYRREAEDLRAIVQDFCAK-----GRVITAIIGHSKGGNAVLLYASKYND-I---SIVINISGRFNLKRGIEGRL 161 (289)
Q Consensus 91 ~~~~~~~~~~~~d~~~~i~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~-v---~~~v~~~~~~~~~~~~~~~~ 161 (289)
....+|+.++++++.+. +.++++|+|||+||.+|+.++...|+ + +++|+++|..+.........
T Consensus 138 -------p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~ 210 (323)
T 3ain_A 138 -------PAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSLY 210 (323)
T ss_dssp -------THHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHHH
T ss_pred -------cchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccHH
Confidence 33456777777777654 46789999999999999999998876 4 89999999766432211000
Q ss_pred --------cchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccC--hhhHH
Q 022960 162 --------GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVP--AEDAL 231 (289)
Q Consensus 162 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~ 231 (289)
.......+....... .............. ....-.|+|+++|++|.+++ ...++
T Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~sp~~~---~l~~l~P~lii~G~~D~l~~~~~~~a~ 274 (323)
T 3ain_A 211 DNGEGFFLTREHIDWFGQQYLRS-------------FADLLDFRFSPILA---DLNDLPPALIITAEHDPLRDQGEAYAN 274 (323)
T ss_dssp HHSSSSSSCHHHHHHHHHHHCSS-------------GGGGGCTTTCGGGS---CCTTCCCEEEEEETTCTTHHHHHHHHH
T ss_pred HhccCCCCCHHHHHHHHHHhCCC-------------CcccCCcccCcccC---cccCCCHHHEEECCCCccHHHHHHHHH
Confidence 000000000000000 00000000000000 11112499999999999884 12233
Q ss_pred HHHhhCCCcEEEEEcCCCccccc------CchHHHHHHHHHHHhhcC
Q 022960 232 EFDKFIPNHKLHIIEGADHEFTS------HQDELASLVIQFIKANYQ 272 (289)
Q Consensus 232 ~~~~~~~~~~~~~~~~~gH~~~~------~~~~~~~~i~~fl~~~~~ 272 (289)
.+.+...+++++++++++|.+.. ..+++.+.+.+||++.+.
T Consensus 275 ~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 275 KLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp HHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 44444457899999999999753 236789999999988764
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-25 Score=165.99 Aligned_cols=183 Identities=14% Similarity=0.139 Sum_probs=134.8
Q ss_pred CceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEc-------------cccCCCCCCC-cccc
Q 022960 32 GEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFD-------------FSGNGESEGS-FLYG 95 (289)
Q Consensus 32 g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d-------------~~G~G~s~~~-~~~~ 95 (289)
|..+.+.+.+++ +.| ||++||++++... |..+.+.|. .++.|+++| ++|+|.+... ....
T Consensus 2 G~~~~~~~~~~~~~~~p-vv~lHG~g~~~~~--~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~ 77 (209)
T 3og9_A 2 GHMTDYVFKAGRKDLAP-LLLLHSTGGDEHQ--LVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLE 77 (209)
T ss_dssp --CCCEEEECCCTTSCC-EEEECCTTCCTTT--THHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHH
T ss_pred CCcceEEEeCCCCCCCC-EEEEeCCCCCHHH--HHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHH
Confidence 334444444443 567 9999999999865 889999998 579999999 6777665432 2233
Q ss_pred chHHHHHHHHHHHHHHHhc-CC--ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhh
Q 022960 96 NYRREAEDLRAIVQDFCAK-GR--VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQ 171 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~-~~--~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
.+...++++.++++.+... ++ ++++|+|||+||.+++.++.++|+ ++++|++++.........
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~------------- 144 (209)
T 3og9_A 78 SLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFEQT------------- 144 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCCCC-------------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccccc-------------
Confidence 4555667777777766544 33 789999999999999999999999 999999998644211000
Q ss_pred cCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcC
Q 022960 172 NGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEG 247 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~ 247 (289)
.....+|+++++|++|+++|.+.++.+.+.++ .+++..++
T Consensus 145 -----------------------------------~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~- 188 (209)
T 3og9_A 145 -----------------------------------VQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS- 188 (209)
T ss_dssp -----------------------------------CCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-
T ss_pred -----------------------------------ccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-
Confidence 01237899999999999999998888877664 35777787
Q ss_pred CCcccccCchHHHHHHHHHHHhh
Q 022960 248 ADHEFTSHQDELASLVIQFIKAN 270 (289)
Q Consensus 248 ~gH~~~~~~~~~~~~i~~fl~~~ 270 (289)
++|.+ ..+..+.+.+||++.
T Consensus 189 ~gH~~---~~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 189 LGHQL---TQEEVLAAKKWLTET 208 (209)
T ss_dssp STTSC---CHHHHHHHHHHHHHH
T ss_pred CCCcC---CHHHHHHHHHHHHhh
Confidence 69987 355678889999764
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=177.80 Aligned_cols=223 Identities=13% Similarity=0.055 Sum_probs=142.6
Q ss_pred ceeeEEeeCCCCceEEEEEeec-CCCcEEEEEcCCC---CCCCCcchHHHHHHHH-HcCccEEEEccccCCCCCCCcccc
Q 022960 21 QRRRVVIPNSHGEKLVGILHET-GSKQLVIVCHGFQ---STKDRIPMVNLAAALE-REGISAFRFDFSGNGESEGSFLYG 95 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~-~~~~~iv~~hG~~---~~~~~~~~~~~~~~l~-~~G~~v~~~d~~G~G~s~~~~~~~ 95 (289)
..+++.++..+| .+.++++.. ++.|+||++||++ ++... |..+++.|+ +.||.|+++|+||+|++..+.
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y~~~~~~p~vv~~HGgg~~~g~~~~--~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~--- 128 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVYQQKPDSPVLVYYHGGGFVICSIES--HDALCRRIARLSNSTVVSVDYRLAPEHKFPA--- 128 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESSSSEEEEEEECCSTTTSCCTGG--GHHHHHHHHHHHTSEEEEEECCCTTTSCTTH---
T ss_pred eEEEEEecCCCC-cEEEEEEcCCCCceEEEEECCcccccCChhH--hHHHHHHHHHHhCCEEEEecCCCCCCCCCCC---
Confidence 477888888777 677666633 3568999999998 66644 888999998 569999999999999986443
Q ss_pred chHHHHHHHHHHHHHHHhc----CC--ceEEEEEeChhHHHHHHHHHhCC-----CccEEEEeccCCccccccccc----
Q 022960 96 NYRREAEDLRAIVQDFCAK----GR--VITAIIGHSKGGNAVLLYASKYN-----DISIVINISGRFNLKRGIEGR---- 160 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~----~~--~~~~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~~~~~~~~~~---- 160 (289)
..+|+.++++++.+. +. ++++|+|||+||.+|+.++...+ .++++|+++|..+........
T Consensus 129 ----~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~ 204 (311)
T 1jji_A 129 ----AVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFG 204 (311)
T ss_dssp ----HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTS
T ss_pred ----cHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccHHHhc
Confidence 234555555555442 33 48999999999999999988754 289999999987653221100
Q ss_pred -----ccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChh--hHHHH
Q 022960 161 -----LGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAE--DALEF 233 (289)
Q Consensus 161 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~--~~~~~ 233 (289)
+.......+....... ............. .....-.|+++++|++|.+++.. ..+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~p~~---~~l~~~~P~li~~G~~D~l~~~~~~~~~~l 268 (311)
T 1jji_A 205 EGLWILDQKIMSWFSEQYFSR-------------EEDKFNPLASVIF---ADLENLPPALIITAEYDPLRDEGEVFGQML 268 (311)
T ss_dssp SSCSSCCHHHHHHHHHHHCSS-------------GGGGGCTTTSGGG---SCCTTCCCEEEEEEEECTTHHHHHHHHHHH
T ss_pred CCCccCCHHHHHHHHHHhCCC-------------CccCCCcccCccc---ccccCCChheEEEcCcCcchHHHHHHHHHH
Confidence 0000000000000000 0000000000000 11111259999999999998533 33555
Q ss_pred HhhCCCcEEEEEcCCCccccc-C-----chHHHHHHHHHHHh
Q 022960 234 DKFIPNHKLHIIEGADHEFTS-H-----QDELASLVIQFIKA 269 (289)
Q Consensus 234 ~~~~~~~~~~~~~~~gH~~~~-~-----~~~~~~~i~~fl~~ 269 (289)
.+...++++++++|++|.+.. . .+++.+.+.+||++
T Consensus 269 ~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 269 RRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 566667999999999998652 2 25678888888864
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-25 Score=174.98 Aligned_cols=229 Identities=17% Similarity=0.202 Sum_probs=152.0
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCC---CCCCCcchHHHHHHHHH-cCccEEEEccccCCCCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQ---STKDRIPMVNLAAALER-EGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~ 91 (289)
+.+..+++++++.+| .+.++++.|. +.|+||++||++ ++... |..++..|++ .||.|+++|+|+.++..
T Consensus 59 ~~~~~~~~~~~~~~g-~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~~--~~~~~~~la~~~g~~V~~~dyr~~p~~~-- 133 (326)
T 3ga7_A 59 PSMTTRTCAVPTPYG-DVTTRLYSPQPTSQATLYYLHGGGFILGNLDT--HDRIMRLLARYTGCTVIGIDYSLSPQAR-- 133 (326)
T ss_dssp CCCEEEEEEECCTTS-CEEEEEEESSSSCSCEEEEECCSTTTSCCTTT--THHHHHHHHHHHCSEEEEECCCCTTTSC--
T ss_pred CCcceEEEEeecCCC-CeEEEEEeCCCCCCcEEEEECCCCcccCChhh--hHHHHHHHHHHcCCEEEEeeCCCCCCCC--
Confidence 345568999999888 7888777653 568999999988 66654 7889999988 79999999999865542
Q ss_pred ccccchHHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCCC-------ccEEEEeccCCccccccc
Q 022960 92 FLYGNYRREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYND-------ISIVINISGRFNLKRGIE 158 (289)
Q Consensus 92 ~~~~~~~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~-------v~~~v~~~~~~~~~~~~~ 158 (289)
+....+|+.++++++.+. +.++++|+|+|+||.+|+.++...++ ++++|+++|..+......
T Consensus 134 -----~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~ 208 (326)
T 3ga7_A 134 -----YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVS 208 (326)
T ss_dssp -----TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHH
T ss_pred -----CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChh
Confidence 345568888899888765 34699999999999999999987653 789999988765432211
Q ss_pred ccc--------cchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhH
Q 022960 159 GRL--------GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDA 230 (289)
Q Consensus 159 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 230 (289)
... .......+....... .....+....... ....+..+|+|+++|+.|.+++ .+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~--~~~~~~~~P~li~~G~~D~~~~--~~ 271 (326)
T 3ga7_A 209 RRLFGGAWDGLTREDLDMYEKAYLRN-------------DEDRESPWYCLFN--NDLTRDVPPCFIASAEFDPLID--DS 271 (326)
T ss_dssp HHHCCCTTTTCCHHHHHHHHHHHCSS-------------GGGGGCTTTSGGG--SCCSSCCCCEEEEEETTCTTHH--HH
T ss_pred HhhhcCCCCCCCHHHHHHHHHHhCCC-------------CCccCCcccCCCc--chhhcCCCCEEEEecCcCcCHH--HH
Confidence 000 000000000000000 0000000000000 0111235699999999999984 44
Q ss_pred HHHHhhC----CCcEEEEEcCCCccccc------CchHHHHHHHHHHHhhcCC
Q 022960 231 LEFDKFI----PNHKLHIIEGADHEFTS------HQDELASLVIQFIKANYQK 273 (289)
Q Consensus 231 ~~~~~~~----~~~~~~~~~~~gH~~~~------~~~~~~~~i~~fl~~~~~~ 273 (289)
+.+++.+ ..+++++++|++|.+.. +.+++.+.+.+||++++..
T Consensus 272 ~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 272 RLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 4444433 45799999999999742 2367999999999988753
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-25 Score=192.57 Aligned_cols=241 Identities=16% Similarity=0.114 Sum_probs=164.9
Q ss_pred cccceeeEEeeCCCCceEEEEEeec------CCCcEEEEEcCCCCCCCCcchHHHHHHHHH-cCccEEEEccccCCCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHET------GSKQLVIVCHGFQSTKDRIPMVNLAAALER-EGISAFRFDFSGNGESEG 90 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~------~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~ 90 (289)
..+..+++.+++.||.++.++++.| ++.|+||++||+++....+.|......|.+ +||.|+++|+||+|.+..
T Consensus 433 ~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~ 512 (710)
T 2xdw_A 433 SDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGE 512 (710)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHH
T ss_pred cccEEEEEEEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCCh
Confidence 3466788999999999999887644 257899999998876654445555557777 899999999999997643
Q ss_pred Ccc----ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc
Q 022960 91 SFL----YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG 162 (289)
Q Consensus 91 ~~~----~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~ 162 (289)
... ........+|+.++++++.++ +.++++++|+|+||++++.++.++|+ ++++|+.+|..+..........
T Consensus 513 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~ 592 (710)
T 2xdw_A 513 TWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIG 592 (710)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTG
T ss_pred HHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCC
Confidence 211 112234468999999999776 45689999999999999999999999 9999999997765432211111
Q ss_pred chhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcc---cccCc-eEEEEEeCCCCccChhhHHHHHhhCC
Q 022960 163 LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHM---ICQDC-RVLTIHGTKDKMVPAEDALEFDKFIP 238 (289)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (289)
..+...+. . ....+.+.............. ..+++ |+|+++|++|..+|+..+.++++.++
T Consensus 593 ~~~~~~~g--------~-------~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~ 657 (710)
T 2xdw_A 593 HAWTTDYG--------C-------SDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQ 657 (710)
T ss_dssp GGGHHHHC--------C-------TTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHH
T ss_pred hhHHHhCC--------C-------CCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHH
Confidence 11111100 0 000111111111111111110 03465 99999999999999998888776654
Q ss_pred C-----------cEEEEEcCCCcccccC---chHHHHHHHHHHHhhcCC
Q 022960 239 N-----------HKLHIIEGADHEFTSH---QDELASLVIQFIKANYQK 273 (289)
Q Consensus 239 ~-----------~~~~~~~~~gH~~~~~---~~~~~~~i~~fl~~~~~~ 273 (289)
. +++++++++||.+... ..+....+.+||.+++..
T Consensus 658 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 658 YIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp HHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 3 4899999999997643 247888999999988754
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-25 Score=175.53 Aligned_cols=237 Identities=11% Similarity=0.077 Sum_probs=148.9
Q ss_pred CcccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcC---CCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCC
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHG---FQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGES 88 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG---~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s 88 (289)
......+++.+++.+| .+.++++.|. +.|+||++|| .+++... |..+++.|+++ ||.|+++|+||+|.+
T Consensus 43 ~~~~~~~~~~i~~~~g-~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~~--~~~~~~~la~~~g~~v~~~d~rg~~~~ 119 (310)
T 2hm7_A 43 EPVAEVREFDMDLPGR-TLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLET--HDPVCRVLAKDGRAVVFSVDYRLAPEH 119 (310)
T ss_dssp CCCSEEEEEEEEETTE-EEEEEEEECTTCCSSEEEEEEECCSTTTSCCTTT--THHHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred CCcceEEEEEeccCCC-eEEEEEEecCCCCCCCCEEEEECCCccccCChhH--hHHHHHHHHHhcCCEEEEeCCCCCCCC
Confidence 3456778888988877 7888777553 4689999999 5566644 88899999886 999999999999876
Q ss_pred CCCccccchHHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCC-----CccEEEEeccCCcccccc
Q 022960 89 EGSFLYGNYRREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYN-----DISIVINISGRFNLKRGI 157 (289)
Q Consensus 89 ~~~~~~~~~~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~~~~~~~ 157 (289)
.. ....+|+.++++++.+. +.++++|+|||+||.+|+.++..+| .++++|+++|..+.....
T Consensus 120 ~~-------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~ 192 (310)
T 2hm7_A 120 KF-------PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAH 192 (310)
T ss_dssp CT-------THHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTS
T ss_pred CC-------CccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCccc
Confidence 42 34567888888888665 2468999999999999999998764 399999999977654110
Q ss_pred cccccchhHhhhhhcCccccccc-ccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhh
Q 022960 158 EGRLGLGYLQRIKQNGFIDVRNK-KGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKF 236 (289)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 236 (289)
. .................. .....+................ ......-.|+|+++|++|.++ ...+.+++.
T Consensus 193 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~l~~~~P~lii~G~~D~~~--~~~~~~~~~ 264 (310)
T 2hm7_A 193 P----PASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVL--YPDLSGLPPAYIATAQYDPLR--DVGKLYAEA 264 (310)
T ss_dssp C----CHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGG--CSCCTTCCCEEEEEEEECTTH--HHHHHHHHH
T ss_pred C----CcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCc--CccccCCCCEEEEEecCCCch--HHHHHHHHH
Confidence 0 000000000000000000 0000000000000000000000 001111249999999999987 344444443
Q ss_pred C----CCcEEEEEcCCCccccc------CchHHHHHHHHHHHhhc
Q 022960 237 I----PNHKLHIIEGADHEFTS------HQDELASLVIQFIKANY 271 (289)
Q Consensus 237 ~----~~~~~~~~~~~gH~~~~------~~~~~~~~i~~fl~~~~ 271 (289)
+ .+++++++++++|.+.. +++++.+.+.+||++.+
T Consensus 265 l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 265 LNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp HHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHh
Confidence 3 45899999999997542 23678999999998765
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.94 E-value=8e-26 Score=175.48 Aligned_cols=205 Identities=15% Similarity=0.184 Sum_probs=135.2
Q ss_pred cCCCcEEEEEcCCCCC---CCCcchHHHHHHH----HHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc
Q 022960 42 TGSKQLVIVCHGFQST---KDRIPMVNLAAAL----EREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK 114 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~---~~~~~~~~~~~~l----~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~ 114 (289)
.++.|+||++||++.. .....|..+++.| .+.||.|+++|+|+.+... +....+|+.++++++.+.
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~-------~~~~~~d~~~~~~~l~~~ 110 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-------NPRNLYDAVSNITRLVKE 110 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-------TTHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCC-------CCcHHHHHHHHHHHHHHh
Confidence 3467899999996632 1223588899999 5679999999999876542 234456777777766554
Q ss_pred -CCceEEEEEeChhHHHHHHHHHhC-----------------CC-ccEEEEeccCCcccccccccccchhHhhhhhcCcc
Q 022960 115 -GRVITAIIGHSKGGNAVLLYASKY-----------------ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFI 175 (289)
Q Consensus 115 -~~~~~~l~G~S~Gg~~a~~~a~~~-----------------p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (289)
+.++++|+|||+||.+|+.++..+ |+ ++++|++++..+......... .+. .+....+.
T Consensus 111 ~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~--~~~-~~~~~~~~ 187 (273)
T 1vkh_A 111 KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYP--EYD-CFTRLAFP 187 (273)
T ss_dssp HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCG--GGH-HHHHHHCT
T ss_pred CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcc--cHH-HHHHHHhc
Confidence 778999999999999999999885 56 999999998765432211110 000 00000000
Q ss_pred cccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcc
Q 022960 176 DVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHE 251 (289)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~ 251 (289)
.....+..........+ ..... .+++|+|+++|++|.++|++.++.+.+.++ ++++++++++||.
T Consensus 188 -----~~~~~~~~~~~~~~~~~----~~~~~--~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~ 256 (273)
T 1vkh_A 188 -----DGIQMYEEEPSRVMPYV----KKALS--RFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHN 256 (273)
T ss_dssp -----TCGGGCCCCHHHHHHHH----HHHHH--HHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGG
T ss_pred -----ccccchhhcccccChhh----hhccc--ccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCccc
Confidence 00000000000000000 00011 147899999999999999999988887765 4799999999999
Q ss_pred cccCchHHHHHHHHHH
Q 022960 252 FTSHQDELASLVIQFI 267 (289)
Q Consensus 252 ~~~~~~~~~~~i~~fl 267 (289)
++.+.+++.+.|.+||
T Consensus 257 ~~~~~~~~~~~i~~fl 272 (273)
T 1vkh_A 257 DVYKNGKVAKYIFDNI 272 (273)
T ss_dssp GGGGCHHHHHHHHHTC
T ss_pred ccccChHHHHHHHHHc
Confidence 7644588888888876
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-24 Score=185.75 Aligned_cols=239 Identities=12% Similarity=0.052 Sum_probs=165.3
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC------CCcEEEEEcCCCCCCCCcchHHHH-HHHHHcCccEEEEccccCCCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG------SKQLVIVCHGFQSTKDRIPMVNLA-AALEREGISAFRFDFSGNGESEG 90 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~~G~G~s~~ 90 (289)
..+..+++.+++.||.++.++++.|. +.|+||++||+++......|.... +.|+++||.|+.+|+||+|....
T Consensus 445 ~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~ 524 (711)
T 4hvt_A 445 ENYVLEQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGP 524 (711)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCH
T ss_pred ccCeeEEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcch
Confidence 34577889999999999998877542 578999999987665443344433 58888999999999999987753
Q ss_pred Ccc----ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc
Q 022960 91 SFL----YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG 162 (289)
Q Consensus 91 ~~~----~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~ 162 (289)
... ........+|+.++++++.++ +.++++++|+|+||++++.++..+|+ ++++|+.+|..++.........
T Consensus 525 ~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~ 604 (711)
T 4hvt_A 525 EWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAG 604 (711)
T ss_dssp HHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTG
T ss_pred hHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccc
Confidence 221 112245568999999999887 34689999999999999999999999 9999999998775432211111
Q ss_pred chhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCc--eEEEEEeCCCCccChhhHHHHHhhC-C-
Q 022960 163 LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDC--RVLTIHGTKDKMVPAEDALEFDKFI-P- 238 (289)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--P~l~i~g~~D~~~~~~~~~~~~~~~-~- 238 (289)
..+...+ +. ....+........+...... ++++ |+|+++|++|..||+..+.++++.+ .
T Consensus 605 ~~~~~~~------------G~---p~~~~~~~~l~~~SP~~~v~--~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~ 667 (711)
T 4hvt_A 605 HSWVTEY------------GD---PEIPNDLLHIKKYAPLENLS--LTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQN 667 (711)
T ss_dssp GGGHHHH------------CC---TTSHHHHHHHHHHCGGGSCC--TTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTC
T ss_pred hHHHHHh------------CC---CcCHHHHHHHHHcCHHHHHh--hcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHH
Confidence 1111110 00 00111111111111222222 2354 9999999999999999998888777 3
Q ss_pred ---CcEEEEEcCCCcccccCc---hHHHHHHHHHHHhhcCC
Q 022960 239 ---NHKLHIIEGADHEFTSHQ---DELASLVIQFIKANYQK 273 (289)
Q Consensus 239 ---~~~~~~~~~~gH~~~~~~---~~~~~~i~~fl~~~~~~ 273 (289)
.+++++++++||.+.... .+....+.+||.++++.
T Consensus 668 ~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~ 708 (711)
T 4hvt_A 668 PNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALKL 708 (711)
T ss_dssp TTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhCC
Confidence 478999999999975432 35667788999988754
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-25 Score=193.10 Aligned_cols=241 Identities=15% Similarity=0.065 Sum_probs=159.9
Q ss_pred cccceeeEEeeCCCCceEEEEEeec----CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHET----GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL 93 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 93 (289)
..+..+++.+++.||.++.++++.| ++.|+||++||+++....+.|......|+++||.|+++|+||+|.+.....
T Consensus 457 ~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~ 536 (741)
T 1yr2_A 457 ADFRVEQVFYPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWH 536 (741)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHH
T ss_pred hHCEEEEEEEEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHH
Confidence 3567788999999999999887654 357899999998877654446666778888999999999999998743211
Q ss_pred c----cchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchh
Q 022960 94 Y----GNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGY 165 (289)
Q Consensus 94 ~----~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~ 165 (289)
. ..-....+|+.++++++.++ +.++++++|+|+||++++.++.++|+ ++++|+.+|..+............+
T Consensus 537 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~ 616 (741)
T 1yr2_A 537 DAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYW 616 (741)
T ss_dssp HTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGG
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchh
Confidence 1 11133468999999999776 45799999999999999999999999 9999999987765431111111111
Q ss_pred HhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCc-eEEEEEeCCCCccChhhHHHHHhhCCC-----
Q 022960 166 LQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDC-RVLTIHGTKDKMVPAEDALEFDKFIPN----- 239 (289)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~----- 239 (289)
...+ .. ....+................ .+++ |+|+++|++|..+|+..+.++.+.++.
T Consensus 617 ~~~~--------g~-------~~~~~~~~~~~~~sp~~~~~~-~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g 680 (741)
T 1yr2_A 617 VDDY--------GY-------PEKEADWRVLRRYSPYHNVRS-GVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGP 680 (741)
T ss_dssp HHHH--------CC-------TTSHHHHHHHHTTCGGGCCCT-TSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCS
T ss_pred HHHc--------CC-------CCCHHHHHHHHHcCchhhhhc-cCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCC
Confidence 1000 00 001111111111111111111 1354 999999999999999998888776644
Q ss_pred --cEEEEEcCCCcccccC---chHHHHHHHHHHHhhcCCC
Q 022960 240 --HKLHIIEGADHEFTSH---QDELASLVIQFIKANYQKD 274 (289)
Q Consensus 240 --~~~~~~~~~gH~~~~~---~~~~~~~i~~fl~~~~~~~ 274 (289)
+++++++++||.+... ..++...+.+||.+++...
T Consensus 681 ~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 720 (741)
T 1yr2_A 681 KPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHFTGLT 720 (741)
T ss_dssp SCEEEEEC---------CHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 7899999999997542 2478889999999988654
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-25 Score=177.51 Aligned_cols=244 Identities=16% Similarity=0.069 Sum_probs=151.2
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCC---CCCCCcchHHHHHHHHHcCccEEEEccccCCCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQ---STKDRIPMVNLAAALEREGISAFRFDFSGNGESEG 90 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~ 90 (289)
.++..+++.+...+|..+.++++.+. +.|+||++||++ ++.....|..+.+.|++.||.|+++|+||+|.+.+
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~ 157 (361)
T 1jkm_A 78 DDVETSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEG 157 (361)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTE
T ss_pred CCceeeeeeeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCC
Confidence 34566778888888877888766543 348999999987 55541147888999998999999999999975542
Q ss_pred CccccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHh-----CCC-ccEEEEeccCCcccccccc-
Q 022960 91 SFLYGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASK-----YND-ISIVINISGRFNLKRGIEG- 159 (289)
Q Consensus 91 ~~~~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~-----~p~-v~~~v~~~~~~~~~~~~~~- 159 (289)
. ..+.....|+.++++++.+. +.++++|+|||+||.+++.++.. .|+ ++++|+++|..+.......
T Consensus 158 ~---~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~ 234 (361)
T 1jkm_A 158 H---HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHE 234 (361)
T ss_dssp E---CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHH
T ss_pred C---CCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccccc
Confidence 2 12344457777777777654 55699999999999999999998 785 9999999998765211000
Q ss_pred ---cccchhHhhhhhcCcccccccc-cccccccChhhhhh-hhccc--hhhhhcccccCceEEEEEeCCCCccChhhHHH
Q 022960 160 ---RLGLGYLQRIKQNGFIDVRNKK-GKLEYRVTQESLMD-RLSTD--IHAACHMICQDCRVLTIHGTKDKMVPAEDALE 232 (289)
Q Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 232 (289)
.....+... ........... ....+......... ..... ...... .+. |+|+++|++|.+++ .++.
T Consensus 235 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~--~l~-P~Lii~G~~D~~~~--~~~~ 307 (361)
T 1jkm_A 235 RRLTELPSLVEN--DGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELR--GLP-PFVVAVNELDPLRD--EGIA 307 (361)
T ss_dssp HHHHHCTHHHHT--TTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHT--TCC-CEEEEEETTCTTHH--HHHH
T ss_pred cccccCcchhhc--cCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHc--CCC-ceEEEEcCcCcchh--hHHH
Confidence 000000000 00000000000 00000000000000 00000 001111 234 99999999999987 4445
Q ss_pred HHhhC----CCcEEEEEcCCCcccc-c------Cc-hHHHHHHHHHHHhhc
Q 022960 233 FDKFI----PNHKLHIIEGADHEFT-S------HQ-DELASLVIQFIKANY 271 (289)
Q Consensus 233 ~~~~~----~~~~~~~~~~~gH~~~-~------~~-~~~~~~i~~fl~~~~ 271 (289)
+++.+ .+++++++++++|.+. . +. +++.+.+.+||+++.
T Consensus 308 ~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 308 FARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 54443 4569999999999865 2 23 678899999998753
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=188.67 Aligned_cols=241 Identities=15% Similarity=0.083 Sum_probs=161.0
Q ss_pred cccceeeEEeeCCCCceEEEEEeec------CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHET------GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~------~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 91 (289)
..+..+++.+++.||.++.++++.| ++.|+||++||+.+......|......|+++||.|+.+|+||+|.....
T Consensus 421 ~~~~~~~~~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 500 (693)
T 3iuj_A 421 EDYVSEQRFYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQA 500 (693)
T ss_dssp GGEEEEEEEEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHH
T ss_pred hhCeeEEEEEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHH
Confidence 3467788999999999999887643 2578999999987765544567777888899999999999999876532
Q ss_pred cc----ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc
Q 022960 92 FL----YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL 163 (289)
Q Consensus 92 ~~----~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~ 163 (289)
.. ........+|+.+++++|.++ +.++++++|+|+||++++.++.++|+ ++++|+.+|..++..........
T Consensus 501 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 580 (693)
T 3iuj_A 501 WHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGT 580 (693)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGG
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCch
Confidence 21 111233468999999999877 34799999999999999999999999 99999999987654321111110
Q ss_pred hhHhhhhhcCcccccccccccccccChhh-hhhhhccchhhhhcccccCce-EEEEEeCCCCccChhhHHHHHhhCC---
Q 022960 164 GYLQRIKQNGFIDVRNKKGKLEYRVTQES-LMDRLSTDIHAACHMICQDCR-VLTIHGTKDKMVPAEDALEFDKFIP--- 238 (289)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~--- 238 (289)
.+...+. . ...... +.............. .+++| +|+++|++|..||+..+.++++.++
T Consensus 581 ~~~~~~g--------~-------p~~~~~~~~~~~~~sp~~~~~~-~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~ 644 (693)
T 3iuj_A 581 GWAYDYG--------T-------SADSEAMFDYLKGYSPLHNVRP-GVSYPSTMVTTADHDDRVVPAHSFKFAATLQADN 644 (693)
T ss_dssp GCHHHHC--------C-------TTSCHHHHHHHHHHCHHHHCCT-TCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHC
T ss_pred hHHHHcC--------C-------ccCHHHHHHHHHhcCHHHhhcc-cCCCCceeEEecCCCCCCChhHHHHHHHHHHhhC
Confidence 0110000 0 001111 000111111111111 14676 9999999999999999888777653
Q ss_pred ----CcEEEEEcCCCccccc---CchHHHHHHHHHHHhhcCCC
Q 022960 239 ----NHKLHIIEGADHEFTS---HQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 239 ----~~~~~~~~~~gH~~~~---~~~~~~~~i~~fl~~~~~~~ 274 (289)
.+++++++++||.+.. ...+....+.+||.+++...
T Consensus 645 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 645 AGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMGYR 687 (693)
T ss_dssp CSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcCCC
Confidence 3589999999999753 23567888999999998654
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=166.05 Aligned_cols=187 Identities=16% Similarity=0.089 Sum_probs=139.4
Q ss_pred CCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCC---CCCC------CccccchH
Q 022960 30 SHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNG---ESEG------SFLYGNYR 98 (289)
Q Consensus 30 ~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G---~s~~------~~~~~~~~ 98 (289)
.++..+.+.+.+++ ++|+||++||++++... |..+.+.|++ ||.|+++|.+++. .+.. .....++.
T Consensus 13 ~~~~~l~~~~~~~~~~~~p~vv~lHG~g~~~~~--~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~ 89 (223)
T 3b5e_A 13 LTDLAFPYRLLGAGKESRECLFLLHGSGVDETT--LVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSIL 89 (223)
T ss_dssp BCSSSSCEEEESTTSSCCCEEEEECCTTBCTTT--THHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHH
T ss_pred ccCCCceEEEeCCCCCCCCEEEEEecCCCCHHH--HHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHHHH
Confidence 34556777666654 56899999999998865 8889999986 8999999988742 1110 01122445
Q ss_pred HHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCc
Q 022960 99 REAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGF 174 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (289)
..++++.++++++.+. +.++++|+|||+||.+++.++.++|+ ++++|++++.......
T Consensus 90 ~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------------ 151 (223)
T 3b5e_A 90 AETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV------------------ 151 (223)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcccc------------------
Confidence 6678888888887654 44789999999999999999999998 9999999986532100
Q ss_pred ccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCc
Q 022960 175 IDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADH 250 (289)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH 250 (289)
.....+++|+++++|++|.++|.+.++ +.+.++ ++++++++ +||
T Consensus 152 ------------------------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH 199 (223)
T 3b5e_A 152 ------------------------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGH 199 (223)
T ss_dssp ------------------------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCS
T ss_pred ------------------------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCC
Confidence 000123789999999999999999888 877765 47899999 999
Q ss_pred ccccCchHHHHHHHHHHHhhcC
Q 022960 251 EFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 251 ~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
.+. .+..+.+.+||++.+.
T Consensus 200 ~~~---~~~~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 200 DIG---DPDAAIVRQWLAGPIA 218 (223)
T ss_dssp CCC---HHHHHHHHHHHHCC--
T ss_pred CcC---HHHHHHHHHHHHhhhh
Confidence 974 3345688999987553
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-26 Score=167.94 Aligned_cols=176 Identities=16% Similarity=0.160 Sum_probs=128.0
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCC------CccccchHHHHHHHHHHHHHHHhc--C
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEG------SFLYGNYRREAEDLRAIVQDFCAK--G 115 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~------~~~~~~~~~~~~d~~~~i~~l~~~--~ 115 (289)
.+++||++||+|++... |..+++.|...|+.|+++|.+|++.-+. ........+..+.+..+++.+... +
T Consensus 21 a~~~Vv~lHG~G~~~~~--~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 98 (210)
T 4h0c_A 21 AKKAVVMLHGRGGTAAD--IISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQGIP 98 (210)
T ss_dssp CSEEEEEECCTTCCHHH--HHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCcEEEEEeCCCCCHHH--HHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 57899999999998754 7778888887899999999998763211 111223444456666777766655 4
Q ss_pred CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhh
Q 022960 116 RVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLM 194 (289)
Q Consensus 116 ~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (289)
.++++|+|+|+||.+++.++.++|+ ++++|.+++.+..........
T Consensus 99 ~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~~~~--------------------------------- 145 (210)
T 4h0c_A 99 AEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAIGNY--------------------------------- 145 (210)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCGGGC---------------------------------
T ss_pred hhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhhhhh---------------------------------
Confidence 5689999999999999999999999 999999988543221100000
Q ss_pred hhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcccccCchHHHHHHHHHHH
Q 022960 195 DRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEFTSHQDELASLVIQFIK 268 (289)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 268 (289)
.....++|++++||++|+++|.+.++.+.+.+. +++++.+|+.||.+ ..+-.+.+.+||.
T Consensus 146 -----------~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i---~~~el~~i~~wL~ 209 (210)
T 4h0c_A 146 -----------KGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTI---SGDEIQLVNNTIL 209 (210)
T ss_dssp -----------CBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSC---CHHHHHHHHHTTT
T ss_pred -----------hhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCc---CHHHHHHHHHHHc
Confidence 000115799999999999999998887666553 47899999999986 3344567788874
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.9e-25 Score=166.22 Aligned_cols=182 Identities=14% Similarity=0.132 Sum_probs=135.6
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc-----CccEEEEccccCCCC------------------CCCccccchHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE-----GISAFRFDFSGNGES------------------EGSFLYGNYRRE 100 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-----G~~v~~~d~~G~G~s------------------~~~~~~~~~~~~ 100 (289)
+.|+||++||++++... |..+.+.|... |+.|+++|.++++.+ ........+.+.
T Consensus 22 ~~p~vv~lHG~g~~~~~--~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 99 (239)
T 3u0v_A 22 HSASLIFLHGSGDSGQG--LRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVM 99 (239)
T ss_dssp CCEEEEEECCTTCCHHH--HHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHH
T ss_pred CCcEEEEEecCCCchhh--HHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHH
Confidence 67899999999998854 88888998875 688999888654211 011122355666
Q ss_pred HHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccc
Q 022960 101 AEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDV 177 (289)
Q Consensus 101 ~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (289)
++++..+++.+... +.++++|+|||+||.+++.++.++|+ ++++|++++...........
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~----------------- 162 (239)
T 3u0v_A 100 CQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQA----------------- 162 (239)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHHHH-----------------
T ss_pred HHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHHHH-----------------
Confidence 77888888776444 45789999999999999999999998 99999999876533211000
Q ss_pred cccccccccccChhhhhhhhccchhhhhcccccCce-EEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCccc
Q 022960 178 RNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCR-VLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEF 252 (289)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~ 252 (289)
.......+| +|+++|++|.++|.+.++.+.+.++ +++++++++++|.+
T Consensus 163 ---------------------------~~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 215 (239)
T 3u0v_A 163 ---------------------------LQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHEL 215 (239)
T ss_dssp ---------------------------HHHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSC
T ss_pred ---------------------------HHhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcC
Confidence 001122567 9999999999999988887777664 68999999999997
Q ss_pred ccCchHHHHHHHHHHHhhcCCC
Q 022960 253 TSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 253 ~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
. .+..+.+.+||++.+...
T Consensus 216 ~---~~~~~~~~~~l~~~l~~~ 234 (239)
T 3u0v_A 216 S---KTELDILKLWILTKLPGE 234 (239)
T ss_dssp C---HHHHHHHHHHHHHHCC--
T ss_pred C---HHHHHHHHHHHHHhCCCc
Confidence 5 567888999999988643
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=191.44 Aligned_cols=230 Identities=17% Similarity=0.145 Sum_probs=156.9
Q ss_pred eeeEEeeCCCCceEEEEEeecC------CCcEEEEEcCCCCCC---CCcchHHHHHHHH-HcCccEEEEccccCCCCCCC
Q 022960 22 RRRVVIPNSHGEKLVGILHETG------SKQLVIVCHGFQSTK---DRIPMVNLAAALE-REGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~---~~~~~~~~~~~l~-~~G~~v~~~d~~G~G~s~~~ 91 (289)
.+.+.+ ..+|..+.++++.|. +.|+||++||++++. ..+.+ .+...|+ ++||.|+++|+||+|.+...
T Consensus 474 ~~~~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~-~~~~~l~~~~G~~Vv~~D~rG~g~~g~~ 551 (740)
T 4a5s_A 474 KKLDFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRL-NWATYLASTENIIVASFDGRGSGYQGDK 551 (740)
T ss_dssp EEEEEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCC-SHHHHHHHTTCCEEEEECCTTCSSSCHH
T ss_pred cEEEEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCc-CHHHHHHhcCCeEEEEEcCCCCCcCChh
Confidence 344555 678999999877553 358999999998773 22211 3445565 47999999999999977543
Q ss_pred ccccch----HHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc
Q 022960 92 FLYGNY----RREAEDLRAIVQDFCAKG---RVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL 163 (289)
Q Consensus 92 ~~~~~~----~~~~~d~~~~i~~l~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~ 163 (289)
.....+ ....+|+.++++++.+.. .++++|+|||+||++++.++.++|+ ++++|+++|..+.... ..
T Consensus 552 ~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~-----~~ 626 (740)
T 4a5s_A 552 IMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYY-----DS 626 (740)
T ss_dssp HHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGS-----BH
T ss_pred HHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHh-----hh
Confidence 221111 234789999999998664 3789999999999999999999999 9999999997664321 11
Q ss_pred hhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCc-eEEEEEeCCCCccChhhHHHHHhhCC----
Q 022960 164 GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDC-RVLTIHGTKDKMVPAEDALEFDKFIP---- 238 (289)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~---- 238 (289)
.+........ ........+. ......... ++++ |+|+++|++|..+|++.++.+.+.++
T Consensus 627 ~~~~~~~~~p-----------~~~~~~~~~~---~~~~~~~~~--~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~ 690 (740)
T 4a5s_A 627 VYTERYMGLP-----------TPEDNLDHYR---NSTVMSRAE--NFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGV 690 (740)
T ss_dssp HHHHHHHCCS-----------STTTTHHHHH---HSCSGGGGG--GGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCC-----------CccccHHHHH---hCCHHHHHh--cCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCC
Confidence 1111111100 0000000111 111111111 3355 99999999999999998888877653
Q ss_pred CcEEEEEcCCCcccc--cCchHHHHHHHHHHHhhcCCC
Q 022960 239 NHKLHIIEGADHEFT--SHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 239 ~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~~~~~ 274 (289)
+.+++++++++|.+. ..++++.+.+.+||++++...
T Consensus 691 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 728 (740)
T 4a5s_A 691 DFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 728 (740)
T ss_dssp CCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 469999999999973 445789999999999998754
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-24 Score=164.59 Aligned_cols=174 Identities=10% Similarity=-0.020 Sum_probs=124.2
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHH-----HHHhcCCce
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQ-----DFCAKGRVI 118 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~-----~l~~~~~~~ 118 (289)
+.|+||++||++++.. .|..+++.|+++||.|+++|+||.+. ..+.....+.+.+... .....+.++
T Consensus 48 ~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~~s~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 119 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPS--TYAGLLSHWASHGFVVAAAETSNAGT------GREMLACLDYLVRENDTPYGTYSGKLNTGR 119 (258)
T ss_dssp CEEEEEEECCTTCCGG--GGHHHHHHHHHHTCEEEEECCSCCTT------SHHHHHHHHHHHHHHHSSSSTTTTTEEEEE
T ss_pred CceEEEEECCCCCCch--hHHHHHHHHHhCCeEEEEecCCCCcc------HHHHHHHHHHHHhcccccccccccccCccc
Confidence 5689999999999874 48999999999999999999995311 1111111222222211 000114568
Q ss_pred EEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhc
Q 022960 119 TAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLS 198 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (289)
++++||||||.+++.++ ..+.+++++++++..... ...
T Consensus 120 i~l~G~S~GG~~a~~~a-~~~~v~~~v~~~~~~~~~--------------------------------~~~--------- 157 (258)
T 2fx5_A 120 VGTSGHSQGGGGSIMAG-QDTRVRTTAPIQPYTLGL--------------------------------GHD--------- 157 (258)
T ss_dssp EEEEEEEHHHHHHHHHT-TSTTCCEEEEEEECCSST--------------------------------TCC---------
T ss_pred eEEEEEChHHHHHHHhc-cCcCeEEEEEecCccccc--------------------------------ccc---------
Confidence 99999999999999977 334499999988743210 000
Q ss_pred cchhhhhcccccCceEEEEEeCCCCccChhh-HHHHHhhC-CCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhcC
Q 022960 199 TDIHAACHMICQDCRVLTIHGTKDKMVPAED-ALEFDKFI-PNHKLHIIEGADHEFT-SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 199 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~-~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~ 272 (289)
.. ...++++|+|+++|++|.++|.+. .+.+.+.. .+++++++++++|.++ +.++++.+.+.+||++.+.
T Consensus 158 ---~~--~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~l~ 229 (258)
T 2fx5_A 158 ---SA--SQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQLM 229 (258)
T ss_dssp ---GG--GGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHHHH
T ss_pred ---hh--hhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccchHHHHHHHHHHHHHHHhc
Confidence 00 111348999999999999999886 78887774 3589999999999976 5578899999999997764
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=197.48 Aligned_cols=228 Identities=17% Similarity=0.194 Sum_probs=156.9
Q ss_pred ceeeEEeeCCCCceEEEEEeecC------CCcEEEEEcCCCCCC---CCcchHHHHHHHHHcCccEEEEccccCCCCCCC
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG------SKQLVIVCHGFQSTK---DRIPMVNLAAALEREGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~---~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 91 (289)
..+.+.+++.+| ++.++++.|. +.|+||++||+++.. ..+.+......|+++||.|+++|+||+|.+...
T Consensus 467 ~~~~~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~ 545 (723)
T 1xfd_A 467 KVEYRDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTK 545 (723)
T ss_dssp BCCBCCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHH
T ss_pred CceEEEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHH
Confidence 456777888888 8888777543 358999999998763 222334566677778999999999999985321
Q ss_pred cc---ccch-HHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhC----CC-ccEEEEeccCCcccccccc
Q 022960 92 FL---YGNY-RREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKY----ND-ISIVINISGRFNLKRGIEG 159 (289)
Q Consensus 92 ~~---~~~~-~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~----p~-v~~~v~~~~~~~~~~~~~~ 159 (289)
.. ...+ ....+|+.++++++.+. +.++++|+|||+||++++.++.++ |+ ++++|+++|..+....
T Consensus 546 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~--- 622 (723)
T 1xfd_A 546 LLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLY--- 622 (723)
T ss_dssp HHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSS---
T ss_pred HHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHh---
Confidence 10 0011 23568888999988766 356899999999999999999999 88 9999999987654321
Q ss_pred cccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccC-ceEEEEEeCCCCccChhhHHHHHhhC-
Q 022960 160 RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQD-CRVLTIHGTKDKMVPAEDALEFDKFI- 237 (289)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~- 237 (289)
...+.......... ... .+. ......... +++ +|+|+++|++|..+|++.++.+++.+
T Consensus 623 --~~~~~~~~~~~~~~-----~~~-~~~----------~~~~~~~~~--~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~ 682 (723)
T 1xfd_A 623 --ASAFSERYLGLHGL-----DNR-AYE----------MTKVAHRVS--ALEEQQFLIIHPTADEKIHFQHTAELITQLI 682 (723)
T ss_dssp --BHHHHHHHHCCCSS-----CCS-STT----------TTCTHHHHT--SCCSCEEEEEEETTCSSSCHHHHHHHHHHHH
T ss_pred --hhhccHhhcCCccC-----Chh-HHH----------hcChhhHHh--hcCCCCEEEEEeCCCCCcCHhHHHHHHHHHH
Confidence 11111111110000 000 000 001111111 346 79999999999999999988887766
Q ss_pred ---CCcEEEEEcCCCcccc--cCchHHHHHHHHHHHhhcC
Q 022960 238 ---PNHKLHIIEGADHEFT--SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 238 ---~~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~~~ 272 (289)
++++++++++++|.+. +.++++.+.+.+||++++.
T Consensus 683 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 683 RGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp HTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred HCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence 4679999999999973 4457899999999987653
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=170.50 Aligned_cols=217 Identities=10% Similarity=0.031 Sum_probs=136.9
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAII 122 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~ 122 (289)
+.+++||++||++++.. .|..+.+ | ..+|+|+++|+||++.+... ..++.++++++.++++.+. ...+++|+
T Consensus 19 ~~~~~lv~lhg~~~~~~--~~~~~~~-l-~~~~~v~~~d~~G~~~~~~~--~~~~~~~~~~~~~~i~~~~--~~~~~~l~ 90 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAF--SYASLPR-L-KSDTAVVGLNCPYARDPENM--NCTHGAMIESFCNEIRRRQ--PRGPYHLG 90 (265)
T ss_dssp TSSEEEEEECCTTCCGG--GGTTSCC-C-SSSEEEEEEECTTTTCGGGC--CCCHHHHHHHHHHHHHHHC--SSCCEEEE
T ss_pred CCCCEEEEECCCCCCHH--HHHHHHh-c-CCCCEEEEEECCCCCCCCCC--CCCHHHHHHHHHHHHHHhC--CCCCEEEE
Confidence 46789999999999885 4888888 7 45799999999999765433 3567888889888888772 13489999
Q ss_pred EeChhHHHHHHHHH---hCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccc-cccccccccccChhhhhhhh
Q 022960 123 GHSKGGNAVLLYAS---KYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDV-RNKKGKLEYRVTQESLMDRL 197 (289)
Q Consensus 123 G~S~Gg~~a~~~a~---~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 197 (289)
||||||.+|+.+|. ..++ ++++|++++...............+...+........ ...............+...+
T Consensus 91 GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
T 3ils_A 91 GWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFTAVV 170 (265)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTSSSSCSSSCSCCCTTHHHHHHHHH
T ss_pred EECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHHHH
Confidence 99999999999998 5676 9999999875432211100001122222211111000 00000000011111111111
Q ss_pred ccc-hhhhhcccccCceEE-EEEeCC---CCcc--------------ChhhHHHHHhhCC--CcEEEEEcCCCcccc---
Q 022960 198 STD-IHAACHMICQDCRVL-TIHGTK---DKMV--------------PAEDALEFDKFIP--NHKLHIIEGADHEFT--- 253 (289)
Q Consensus 198 ~~~-~~~~~~~~~~~~P~l-~i~g~~---D~~~--------------~~~~~~~~~~~~~--~~~~~~~~~~gH~~~--- 253 (289)
... ........++++|++ +++|++ |..+ +......+.+..+ +++++.++|+||+++
T Consensus 171 ~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~i~gagH~~~~~~ 250 (265)
T 3ils_A 171 DVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPGASFDIVRADGANHFTLMQK 250 (265)
T ss_dssp HHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHSTTCCEEEEEEEEEETTGGGST
T ss_pred HHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCCccceeEEEcCCCCcceeeCh
Confidence 000 000011125689988 999999 9987 4445566666665 789999999999976
Q ss_pred cCchHHHHHHHHHH
Q 022960 254 SHQDELASLVIQFI 267 (289)
Q Consensus 254 ~~~~~~~~~i~~fl 267 (289)
+.++++++.|.+||
T Consensus 251 e~~~~v~~~i~~fL 264 (265)
T 3ils_A 251 EHVSIISDLIDRVM 264 (265)
T ss_dssp TTTHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHh
Confidence 45678888888886
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=172.49 Aligned_cols=224 Identities=14% Similarity=0.160 Sum_probs=141.7
Q ss_pred cccceeeEEeeCCCCceEEEEEeec--CCCcE-EEEEcCCC---CCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHET--GSKQL-VIVCHGFQ---STKDRIPMVNLAAALERE-GISAFRFDFSGNGESEG 90 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~--~~~~~-iv~~hG~~---~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~ 90 (289)
.++..+++.+ +|..+ +.++ +++++ ||++||++ ++.. .|..++..|+.. ||.|+++|+|+++++.
T Consensus 56 ~~~~~~~~~~---~g~~~---~~p~~~~~~~~~vv~~HGgg~~~g~~~--~~~~~~~~la~~~g~~v~~~dyr~~~~~~- 126 (322)
T 3k6k_A 56 EGVELTLTDL---GGVPC---IRQATDGAGAAHILYFHGGGYISGSPS--THLVLTTQLAKQSSATLWSLDYRLAPENP- 126 (322)
T ss_dssp TTCEEEEEEE---TTEEE---EEEECTTCCSCEEEEECCSTTTSCCHH--HHHHHHHHHHHHHTCEEEEECCCCTTTSC-
T ss_pred CCceEEEEEE---CCEeE---EecCCCCCCCeEEEEEcCCcccCCChH--HHHHHHHHHHHhcCCEEEEeeCCCCCCCC-
Confidence 3445555554 56666 3333 35566 99999977 4443 477888888865 9999999999887653
Q ss_pred CccccchHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-----ccEEEEeccCCccccccccccc-
Q 022960 91 SFLYGNYRREAEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNLKRGIEGRLG- 162 (289)
Q Consensus 91 ~~~~~~~~~~~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~~~~~~~~~~- 162 (289)
+....+|+.++++++.+. +.++++|+|||+||.+|+.++...++ ++++|+++|..+..........
T Consensus 127 ------~~~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~ 200 (322)
T 3k6k_A 127 ------FPAAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNL 200 (322)
T ss_dssp ------TTHHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHT
T ss_pred ------CchHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhc
Confidence 244567888888888765 56799999999999999999987643 8999999998765432111000
Q ss_pred --------chhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHH
Q 022960 163 --------LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFD 234 (289)
Q Consensus 163 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 234 (289)
......+... +.. ..... ...... ........+|+|+++|++|.++ ..++.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~-~~~---~~~~~----------~~~~sp---~~~~~~~~pP~li~~G~~D~~~--~~~~~~~ 261 (322)
T 3k6k_A 201 ADRDFLAEPDTLGEMSEL-YVG---GEDRK----------NPLISP---VYADLSGLPEMLIHVGSEEALL--SDSTTLA 261 (322)
T ss_dssp GGGCSSSCHHHHHHHHHH-HHT---TSCTT----------CTTTCG---GGSCCTTCCCEEEEEESSCTTH--HHHHHHH
T ss_pred cCCCCcCCHHHHHHHHHH-hcC---CCCCC----------CCcCCc---ccccccCCCcEEEEECCcCccH--HHHHHHH
Confidence 0000000000 000 00000 000000 0011122469999999999885 3444444
Q ss_pred hh----CCCcEEEEEcCCCccccc------CchHHHHHHHHHHHhhcCCCC
Q 022960 235 KF----IPNHKLHIIEGADHEFTS------HQDELASLVIQFIKANYQKDG 275 (289)
Q Consensus 235 ~~----~~~~~~~~~~~~gH~~~~------~~~~~~~~i~~fl~~~~~~~~ 275 (289)
+. -.++++++++|++|.+.. +.+++.+.+.+||++++....
T Consensus 262 ~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3k6k_A 262 ERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKLA 312 (322)
T ss_dssp HHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC---
T ss_pred HHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhccc
Confidence 43 346799999999998652 245799999999999887653
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-23 Score=161.58 Aligned_cols=231 Identities=16% Similarity=0.142 Sum_probs=144.3
Q ss_pred EeeCCCCceEEEEEeec--CCCcEEEEEcCCC---CCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHH
Q 022960 26 VIPNSHGEKLVGILHET--GSKQLVIVCHGFQ---STKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRRE 100 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~--~~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~ 100 (289)
.+...+|..+.. +.+ +++|+||++||+| ++... ++..+.+.+++.||.|+++|+|+..+ ..+...
T Consensus 8 ~~~~~~~~~~~~--y~p~~~~~p~iv~~HGGg~~~g~~~~-~~~~~~~~l~~~g~~Vi~vdYrlaPe-------~~~p~~ 77 (274)
T 2qru_A 8 NQTLANGATVTI--YPTTTEPTNYVVYLHGGGMIYGTKSD-LPEELKELFTSNGYTVLALDYLLAPN-------TKIDHI 77 (274)
T ss_dssp EEECTTSCEEEE--ECCSSSSCEEEEEECCSTTTSCCGGG-CCHHHHHHHHTTTEEEEEECCCCTTT-------SCHHHH
T ss_pred cccccCCeeEEE--EcCCCCCCcEEEEEeCccccCCChhh-chHHHHHHHHHCCCEEEEeCCCCCCC-------CCCcHH
Confidence 344446777764 444 4678999999998 44433 23567778888899999999997542 256788
Q ss_pred HHHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHH---hCCC-ccEEEEeccCCccccccccc------ccchhHhh
Q 022960 101 AEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYAS---KYND-ISIVINISGRFNLKRGIEGR------LGLGYLQR 168 (289)
Q Consensus 101 ~~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~---~~p~-v~~~v~~~~~~~~~~~~~~~------~~~~~~~~ 168 (289)
++|+.++++++.++. .++++|+|+|+||.+|+.++. ..+. ++++++++|..+........ ........
T Consensus 78 ~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (274)
T 2qru_A 78 LRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISAKEIAA 157 (274)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCSGGGTT
T ss_pred HHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccHHHHhh
Confidence 999999999997662 679999999999999999987 3455 99999988766521110000 00000000
Q ss_pred hhhcCccccccccccccccc--Chh---hhhhhhc---c----ch-hhhhcccccCceEEEEEeCCCCccChhhHHHHHh
Q 022960 169 IKQNGFIDVRNKKGKLEYRV--TQE---SLMDRLS---T----DI-HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDK 235 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~---~----~~-~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 235 (289)
+.... ..........+.. ... .+..... . .. ........+ .|+|+++|+.|+.++...++.+.+
T Consensus 158 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~l~~ 234 (274)
T 2qru_A 158 IDQTK--PVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKKIGR 234 (274)
T ss_dssp SCCSS--CCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHHHHH
T ss_pred hcccC--CCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHHHHH
Confidence 00000 0000000000000 000 0000000 0 00 000011223 699999999999999999999999
Q ss_pred hCCCcEEEEEcCCCcccccC-c----hHHHHHHHHHHHh
Q 022960 236 FIPNHKLHIIEGADHEFTSH-Q----DELASLVIQFIKA 269 (289)
Q Consensus 236 ~~~~~~~~~~~~~gH~~~~~-~----~~~~~~i~~fl~~ 269 (289)
.+++++++++++++|.+..+ + +++.+.+.+||++
T Consensus 235 ~~~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 235 TIPESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp HSTTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred hCCCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 99999999999999997532 2 2567888888865
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.93 E-value=7e-25 Score=173.59 Aligned_cols=234 Identities=13% Similarity=0.087 Sum_probs=153.9
Q ss_pred CcccceeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCC---CCCCCcchHHHHHHHHH-cCccEEEEccccCCCCCC
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQ---STKDRIPMVNLAAALER-EGISAFRFDFSGNGESEG 90 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~ 90 (289)
...+..+++++++.+|..+.++++.|. +.|+||++||+| ++... +..++..|+. .||.|+++|+|+.++..
T Consensus 55 ~~~~~~~~~~i~~~~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~~~--~~~~~~~la~~~g~~vv~~dyr~~p~~~- 131 (317)
T 3qh4_A 55 AAGVAVADDVVTGEAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLDT--DHRQCLELARRARCAVVSVDYRLAPEHP- 131 (317)
T ss_dssp HHCCEEEEEEEECTTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTTT--THHHHHHHHHHHTSEEEEECCCCTTTSC-
T ss_pred CCcceEEEEEecCCCCCeEEEEEEecCCCCCcEEEEECCCcCccCChHH--HHHHHHHHHHHcCCEEEEecCCCCCCCC-
Confidence 345778899999999988988887663 678999999987 44433 7778888885 49999999999766543
Q ss_pred CccccchHHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCC-----CccEEEEeccCCcccccccc
Q 022960 91 SFLYGNYRREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYN-----DISIVINISGRFNLKRGIEG 159 (289)
Q Consensus 91 ~~~~~~~~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~~~~~~~~~ 159 (289)
+....+|+.++++++.++ +.++++|+|+|+||.+|+.++...+ .++++++++|..+.. ....
T Consensus 132 ------~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~-~~~~ 204 (317)
T 3qh4_A 132 ------YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR-PTAS 204 (317)
T ss_dssp ------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS-CCHH
T ss_pred ------CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC-CCcC
Confidence 345567888888887663 3458999999999999999988642 389999999987754 1100
Q ss_pred cccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhh---hhcccccCceEEEEEeCCCCccC--hhhHHHHH
Q 022960 160 RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHA---ACHMICQDCRVLTIHGTKDKMVP--AEDALEFD 234 (289)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~ 234 (289)
............. ........+......+... .......-.|+++++|+.|.+++ ...++.+.
T Consensus 205 ------~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~~l~~lpP~li~~G~~D~~~~~~~~~a~~l~ 272 (317)
T 3qh4_A 205 ------RSEFRATPAFDGE------AASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGEIDPFRDEVLDYAQRLL 272 (317)
T ss_dssp ------HHHTTTCSSSCHH------HHHHHHHHHHTTCCCCTTTCGGGCSCCTTCCCEEEEEEEESTTHHHHHHHHHHHH
T ss_pred ------HHHhcCCCCcCHH------HHHHHHHHhcCCCCCCcccCCCcccccCCCCceeEEecCcCCCchhHHHHHHHHH
Confidence 0000000000000 0000000000000000000 00011113499999999999987 45566677
Q ss_pred hhCCCcEEEEEcCCCcccc------cCchHHHHHHHHHHHhhcC
Q 022960 235 KFIPNHKLHIIEGADHEFT------SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 235 ~~~~~~~~~~~~~~gH~~~------~~~~~~~~~i~~fl~~~~~ 272 (289)
+...++++++++|++|.+. ...+++.+.+.+||++.+.
T Consensus 273 ~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 273 GAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 7777899999999999854 2236789999999998764
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-24 Score=172.11 Aligned_cols=233 Identities=15% Similarity=0.048 Sum_probs=144.4
Q ss_pred cccceeeEEeeCCCCceEEEEEeec------------------CCCcEEEEEcCCCCCC---CCcchHHHHHHHH-HcCc
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHET------------------GSKQLVIVCHGFQSTK---DRIPMVNLAAALE-REGI 75 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~------------------~~~~~iv~~hG~~~~~---~~~~~~~~~~~l~-~~G~ 75 (289)
.++..+++.+...++..+..+.-.. ++.|+||++||++... ....|..++..|+ +.||
T Consensus 68 ~~v~~~dv~~~~~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~ 147 (351)
T 2zsh_A 68 DGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKC 147 (351)
T ss_dssp TTEEEEEEEEETTTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTS
T ss_pred CCceEEEEEecCCCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCC
Confidence 4667778888764444444332211 2458999999976432 2223788999998 6799
Q ss_pred cEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-------CCc-eEEEEEeChhHHHHHHHHHhCC----CccE
Q 022960 76 SAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-------GRV-ITAIIGHSKGGNAVLLYASKYN----DISI 143 (289)
Q Consensus 76 ~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-------~~~-~~~l~G~S~Gg~~a~~~a~~~p----~v~~ 143 (289)
.|+++|+||++++. +....+|+.++++++.+. +.+ +++|+|||+||.+|+.+|.+++ .+++
T Consensus 148 ~vv~~d~rg~~~~~-------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~ 220 (351)
T 2zsh_A 148 VVVSVNYRRAPENP-------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLG 220 (351)
T ss_dssp EEEEECCCCTTTSC-------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCE
T ss_pred EEEEecCCCCCCCC-------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeE
Confidence 99999999977653 234568888888888763 456 9999999999999999998876 3999
Q ss_pred EEEeccCCcccccccccc--------cchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCc-eE
Q 022960 144 VINISGRFNLKRGIEGRL--------GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDC-RV 214 (289)
Q Consensus 144 ~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~ 214 (289)
+|+++|.+.......... .......+... + ......... .....+. .... ....+.+ |+
T Consensus 221 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~-----~~~~~~~-~~~~--~l~~i~~pP~ 288 (351)
T 2zsh_A 221 NILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKA-F---LPEGEDREH-----PACNPFS-PRGK--SLEGVSFPKS 288 (351)
T ss_dssp EEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHH-H---SCTTCCTTS-----TTTCTTS-TTSC--CCTTCCCCEE
T ss_pred EEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHH-h---CCCCCCCCC-----cccCCCC-CCcc--chhhCCCCCE
Confidence 999998765432111000 00000000000 0 000000000 0000000 0000 1112345 99
Q ss_pred EEEEeCCCCccChh--hHHHHHhhCCCcEEEEEcCCCccccc-----CchHHHHHHHHHHHh
Q 022960 215 LTIHGTKDKMVPAE--DALEFDKFIPNHKLHIIEGADHEFTS-----HQDELASLVIQFIKA 269 (289)
Q Consensus 215 l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~~~~~~~i~~fl~~ 269 (289)
|+++|++|.+++.. ..+.+.+...+++++++++++|.++. .++++.+.|.+||++
T Consensus 289 Lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 289 LVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EEEEcCCCcchHHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 99999999988622 23334444457899999999998653 346799999999974
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-24 Score=187.61 Aligned_cols=229 Identities=18% Similarity=0.166 Sum_probs=156.5
Q ss_pred ceeeEEeeCCCCceEEEEEeecC------CCcEEEEEcCCCCCCCC-cchH-HHHHHHH-HcCccEEEEccccCCCCCCC
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG------SKQLVIVCHGFQSTKDR-IPMV-NLAAALE-REGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~-~~~~-~~~~~l~-~~G~~v~~~d~~G~G~s~~~ 91 (289)
..+.+.++..+ .++.++++.|. +.|+||++||++++... ..|. .+...|. ++||.|+++|+||+|.+...
T Consensus 467 ~~~~~~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~ 545 (719)
T 1z68_A 467 KEEIKKLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDK 545 (719)
T ss_dssp EEEEEEEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHH
T ss_pred ceEEEEEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchh
Confidence 45677788777 88988877553 35789999999986431 1122 3455554 67999999999999998643
Q ss_pred cccc---ch-HHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc
Q 022960 92 FLYG---NY-RREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL 163 (289)
Q Consensus 92 ~~~~---~~-~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~ 163 (289)
.... .+ ....+|+.++++++.+. +.++++++|||+||.+++.++..+|+ ++++|+++|..+.... ..
T Consensus 546 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-----~~ 620 (719)
T 1z68_A 546 LLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYY-----AS 620 (719)
T ss_dssp HHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTS-----BH
T ss_pred hHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHh-----cc
Confidence 2111 11 24578999999999775 24689999999999999999999998 9999999997654321 11
Q ss_pred hhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCc-eEEEEEeCCCCccChhhHHHHHhhCC----
Q 022960 164 GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDC-RVLTIHGTKDKMVPAEDALEFDKFIP---- 238 (289)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~---- 238 (289)
.+........ .. ......+. ..+...... ++++ |+|+++|++|..+|++.++.+++.++
T Consensus 621 ~~~~~~~g~~-----~~------~~~~~~~~---~~~~~~~~~--~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~ 684 (719)
T 1z68_A 621 VYTERFMGLP-----TK------DDNLEHYK---NSTVMARAE--YFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQV 684 (719)
T ss_dssp HHHHHHHCCS-----ST------TTTHHHHH---HTCSGGGGG--GGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTC
T ss_pred ccchhhcCCc-----cc------ccchhhhh---hCCHhHHHh--cCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCC
Confidence 1111111000 00 00000111 011111111 3466 99999999999999999888887663
Q ss_pred CcEEEEEcCCCccccc-CchHHHHHHHHHHHhhc
Q 022960 239 NHKLHIIEGADHEFTS-HQDELASLVIQFIKANY 271 (289)
Q Consensus 239 ~~~~~~~~~~gH~~~~-~~~~~~~~i~~fl~~~~ 271 (289)
..++++++++||.+.. .++++.+.+.+||++++
T Consensus 685 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~l 718 (719)
T 1z68_A 685 DFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQCF 718 (719)
T ss_dssp CCEEEEETTCCTTCCTHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECcCCCCCCcccHHHHHHHHHHHHHHhh
Confidence 4679999999999843 35789999999999875
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.7e-25 Score=172.85 Aligned_cols=220 Identities=11% Similarity=0.111 Sum_probs=143.4
Q ss_pred eeeEEeeCCCCceEEEEEee--cCCCcEEEEEcCCCCCCC-CcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchH
Q 022960 22 RRRVVIPNSHGEKLVGILHE--TGSKQLVIVCHGFQSTKD-RIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~--~~~~~~iv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~ 98 (289)
..++.+. .++..+..+... .++.|+||++||++.... ...|..+++.|+++||.|+++|+||+|.+. +.
T Consensus 58 ~~~i~y~-~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~-------~~ 129 (303)
T 4e15_A 58 VDHLRYG-EGRQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT-------LE 129 (303)
T ss_dssp EEEEECS-STTCEEEEEECTTCCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC-------HH
T ss_pred eeeeccC-CCCcEEEEEecCCCCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC-------hh
Confidence 4455565 444445433321 236789999999653221 123667889999999999999999998653 45
Q ss_pred HHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHhC-----C---CccEEEEeccCCcccccccccccchhH
Q 022960 99 REAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASKY-----N---DISIVINISGRFNLKRGIEGRLGLGYL 166 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~-----p---~v~~~v~~~~~~~~~~~~~~~~~~~~~ 166 (289)
...+|+.++++++.+. +.++++|+|||+||.+++.++... | .++++|+++|.++........ ..+.
T Consensus 130 ~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~--~~~~ 207 (303)
T 4e15_A 130 QLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLE--SVNP 207 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCT--TTSG
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhccc--ccch
Confidence 6678888888888652 677999999999999999998754 3 599999999987754322100 0000
Q ss_pred hhhhhcCcccccccccccccccChhhhhhhhccchhhhhcc--cccCceEEEEEeCCCCccChhhHHHHHhhCC----Cc
Q 022960 167 QRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHM--ICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NH 240 (289)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~ 240 (289)
..... .....+.. ... ....... ..+.+|+|+++|++|.+++.+.++.+++.++ ++
T Consensus 208 ~~~~~----------------~~~~~~~~-~sp-~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~ 269 (303)
T 4e15_A 208 KNILG----------------LNERNIES-VSP-MLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKA 269 (303)
T ss_dssp GGTTC----------------CCTTTTTT-TCG-GGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCE
T ss_pred hhhhc----------------CCHHHHHH-cCc-hhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCce
Confidence 00000 00000000 000 0000000 1237899999999999999999998888775 57
Q ss_pred EEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 241 KLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 241 ~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+++++++++|+.+ +...+....+.+||.+
T Consensus 270 ~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 299 (303)
T 4e15_A 270 SFTLFKGYDHFDIIEETAIDDSDVSRFLRN 299 (303)
T ss_dssp EEEEEEEEETTHHHHGGGSTTSHHHHHHHH
T ss_pred EEEEeCCCCchHHHHHHhCCCcHHHHHHHH
Confidence 9999999999844 4455566667776654
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=183.84 Aligned_cols=242 Identities=11% Similarity=-0.009 Sum_probs=161.3
Q ss_pred ccceeeEEeeCCCCceEEEEEeec------CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHET------GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~------~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
.+..+.+.+++.||.++.++++.+ ++.|+||++||+++......|......|+++||.|+.+|+||+|.+....
T Consensus 477 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~ 556 (751)
T 2xe4_A 477 NYKVERRFATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAW 556 (751)
T ss_dssp GEEEEEEEEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHH
T ss_pred ceEEEEEEEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcch
Confidence 456788899999999999876543 25689999999887654334555667888899999999999999764322
Q ss_pred cc-----cchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc
Q 022960 93 LY-----GNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL 163 (289)
Q Consensus 93 ~~-----~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~ 163 (289)
.. .......+|+.++++++.++ +.++++++|+|+||++++.++.++|+ ++++|+.+|..++...+......
T Consensus 557 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~ 636 (751)
T 2xe4_A 557 YEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIP 636 (751)
T ss_dssp HHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTCTTST
T ss_pred hhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcccCcc
Confidence 11 11134568889999998776 45799999999999999999999998 99999999977653321100000
Q ss_pred hhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCce-EEEEEeCCCCccChhhHHHHHhhCCC---
Q 022960 164 GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCR-VLTIHGTKDKMVPAEDALEFDKFIPN--- 239 (289)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~--- 239 (289)
...... ..+ +. ....+.+............. ++++| +|+++|++|..||+..+.++++.++.
T Consensus 637 ~~~~~~--~~~-------g~---p~~~~~~~~~~~~sp~~~~~--~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~ 702 (751)
T 2xe4_A 637 LTTGEW--EEW-------GN---PNEYKYYDYMLSYSPMDNVR--AQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKT 702 (751)
T ss_dssp THHHHT--TTT-------CC---TTSHHHHHHHHHHCTGGGCC--SSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCC
T ss_pred cchhhH--HHc-------CC---CCCHHHHHHHHhcChhhhhc--cCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCC
Confidence 000000 000 00 00111111111111111222 34776 99999999999999998888776642
Q ss_pred ----cEEEEEcCCCcccccCc---hHHHHHHHHHHHhhcCCC
Q 022960 240 ----HKLHIIEGADHEFTSHQ---DELASLVIQFIKANYQKD 274 (289)
Q Consensus 240 ----~~~~~~~~~gH~~~~~~---~~~~~~i~~fl~~~~~~~ 274 (289)
..+.+++++||.+.... .+....+.+||.+++...
T Consensus 703 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~ 744 (751)
T 2xe4_A 703 DNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKST 744 (751)
T ss_dssp SCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCCC
Confidence 23455599999976432 245667999999988654
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.8e-24 Score=159.64 Aligned_cols=203 Identities=18% Similarity=0.321 Sum_probs=141.7
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCc--cEEEEccccCCCCC--C--------Cc--------cccchHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGI--SAFRFDFSGNGESE--G--------SF--------LYGNYRREAED 103 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~~G~G~s~--~--------~~--------~~~~~~~~~~d 103 (289)
+.++|||+||++++... |..+++.|.+.|+ .|+.+|.+++|.+. + +. ...++..++++
T Consensus 5 ~~~pvvliHG~~~~~~~--~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~ 82 (249)
T 3fle_A 5 KTTATLFLHGYGGSERS--ETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYW 82 (249)
T ss_dssp CCEEEEEECCTTCCGGG--THHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHH
T ss_pred CCCcEEEECCCCCChhH--HHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHH
Confidence 56799999999999965 9999999999986 69999999888641 1 10 12355667889
Q ss_pred HHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCC------CccEEEEeccCCcccccccccccchhHhhhhhcCccc
Q 022960 104 LRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYN------DISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID 176 (289)
Q Consensus 104 ~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p------~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (289)
+.++++.+.+. +.+++.++||||||.+++.++..+| .|+++|++++++............ ..+.
T Consensus 83 l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~---~~~~------ 153 (249)
T 3fle_A 83 IKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNE---IIVD------ 153 (249)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTT---SCBC------
T ss_pred HHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcch---hhhc------
Confidence 99999988766 7889999999999999999999875 399999999887654221111000 0000
Q ss_pred ccccccccccccChhhhhhhhccchhhhhcccc-cCceEEEEEeC------CCCccChhhHHHHHhhCCC----cEEEEE
Q 022960 177 VRNKKGKLEYRVTQESLMDRLSTDIHAACHMIC-QDCRVLTIHGT------KDKMVPAEDALEFDKFIPN----HKLHII 245 (289)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~----~~~~~~ 245 (289)
..+. .......+.+.+ .....++ .++|+|.|+|+ .|..||...++.+...+++ .+.+.+
T Consensus 154 ---~~g~--p~~~~~~~~~l~-----~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v 223 (249)
T 3fle_A 154 ---KQGK--PSRMNAAYRQLL-----SLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKF 223 (249)
T ss_dssp ---TTCC--BSSCCHHHHHTG-----GGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEE
T ss_pred ---ccCC--CcccCHHHHHHH-----HHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEE
Confidence 0000 000111111111 1111123 47899999998 7999999999887776654 255666
Q ss_pred cC--CCcccccCchHHHHHHHHHH
Q 022960 246 EG--ADHEFTSHQDELASLVIQFI 267 (289)
Q Consensus 246 ~~--~gH~~~~~~~~~~~~i~~fl 267 (289)
.| +.|..+.+.+++.+.|.+||
T Consensus 224 ~g~~a~Hs~l~~n~~V~~~I~~FL 247 (249)
T 3fle_A 224 KGAKAQHSQLHENKDVANEIIQFL 247 (249)
T ss_dssp ESGGGSTGGGGGCHHHHHHHHHHH
T ss_pred eCCCCchhccccCHHHHHHHHHHh
Confidence 55 89997766789999999998
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-24 Score=168.25 Aligned_cols=217 Identities=15% Similarity=0.027 Sum_probs=140.3
Q ss_pred EeecCCCcEEEEEcCC--CCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCC
Q 022960 39 LHETGSKQLVIVCHGF--QSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGR 116 (289)
Q Consensus 39 ~~~~~~~~~iv~~hG~--~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~ 116 (289)
+...+.+|+|||+||+ +++. +.|..+++.| ..||.|+++|+||||.+.... .++...++++.++++.+. +.
T Consensus 75 l~~~~~~~~lv~lhG~~~~~~~--~~~~~~~~~L-~~~~~v~~~d~~G~G~~~~~~--~~~~~~~~~~~~~l~~~~--~~ 147 (319)
T 3lcr_A 75 LGRGQLGPQLILVCPTVMTTGP--QVYSRLAEEL-DAGRRVSALVPPGFHGGQALP--ATLTVLVRSLADVVQAEV--AD 147 (319)
T ss_dssp ESSCCSSCEEEEECCSSTTCSG--GGGHHHHHHH-CTTSEEEEEECTTSSTTCCEE--SSHHHHHHHHHHHHHHHH--TT
T ss_pred ecCCCCCCeEEEECCCCcCCCH--HHHHHHHHHh-CCCceEEEeeCCCCCCCCCCC--CCHHHHHHHHHHHHHHhc--CC
Confidence 3445678999999996 4444 4699999999 557999999999999865433 367777888888877663 34
Q ss_pred ceEEEEEeChhHHHHHHHHHhC---CC-ccEEEEeccCCccccc-ccccccchhHhhhhhcC--cccccccccccccccC
Q 022960 117 VITAIIGHSKGGNAVLLYASKY---ND-ISIVINISGRFNLKRG-IEGRLGLGYLQRIKQNG--FIDVRNKKGKLEYRVT 189 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 189 (289)
++++|+||||||.+|+.+|.++ |+ ++++|++++....... ........+...+.... +.... .....
T Consensus 148 ~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 221 (319)
T 3lcr_A 148 GEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGG------NLSQR 221 (319)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCC------CHHHH
T ss_pred CCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCC------chhHH
Confidence 6899999999999999999887 77 9999999876543321 11111111111110000 00000 00000
Q ss_pred hhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEcCCCcccc-c--CchHHHHHHHH
Q 022960 190 QESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHEFT-S--HQDELASLVIQ 265 (289)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~-~--~~~~~~~~i~~ 265 (289)
...+...+. ........++++|+|+++|++ ..+++.....+.+.+++ .+++.+++ +|+.+ + +++++++.|.+
T Consensus 222 l~~~~~~~~--~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~g-~H~~~~~~~~~~~va~~i~~ 297 (319)
T 3lcr_A 222 ITAQVWCLE--LLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAAMGQVVEAPG-DHFTIIEGEHVASTAHIVGD 297 (319)
T ss_dssp HHHHHHHHH--HTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHHTCSEEEEESS-CTTGGGSTTTHHHHHHHHHH
T ss_pred HHHHHHHHH--HHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCCCCceEEEeCC-CcHHhhCcccHHHHHHHHHH
Confidence 000011100 001111135689999999998 45666777777777765 78888886 66644 4 56899999999
Q ss_pred HHHhhcC
Q 022960 266 FIKANYQ 272 (289)
Q Consensus 266 fl~~~~~ 272 (289)
||++...
T Consensus 298 fL~~~~~ 304 (319)
T 3lcr_A 298 WLREAHA 304 (319)
T ss_dssp HHHHHHC
T ss_pred HHHhccc
Confidence 9998654
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-25 Score=170.42 Aligned_cols=214 Identities=20% Similarity=0.230 Sum_probs=124.3
Q ss_pred ecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CC---
Q 022960 41 ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GR--- 116 (289)
Q Consensus 41 ~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~--- 116 (289)
.++++++|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|.... .+|+.++++.+.+. +.
T Consensus 9 ~~~~~~~lv~lhg~g~~~~--~~~~~~~~L~~-~~~vi~~Dl~GhG~S~~~~--------~~~~~~~~~~~~~~l~~~~~ 77 (242)
T 2k2q_B 9 DASEKTQLICFPFAGGYSA--SFRPLHAFLQG-ECEMLAAEPPGHGTNQTSA--------IEDLEELTDLYKQELNLRPD 77 (242)
T ss_dssp STTCCCEEESSCCCCHHHH--HHHHHHHHHCC-SCCCEEEECCSSCCSCCCT--------TTHHHHHHHHTTTTCCCCCC
T ss_pred CCCCCceEEEECCCCCCHH--HHHHHHHhCCC-CeEEEEEeCCCCCCCCCCC--------cCCHHHHHHHHHHHHHhhcC
Confidence 3457789999999999884 59999999976 5999999999999996431 13444444433222 33
Q ss_pred ceEEEEEeChhHHHHHHHHHh------CCCccEEEEeccCC-cccccccccc-cchhHhhhhhcCccccccccccccccc
Q 022960 117 VITAIIGHSKGGNAVLLYASK------YNDISIVINISGRF-NLKRGIEGRL-GLGYLQRIKQNGFIDVRNKKGKLEYRV 188 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~~~a~~------~p~v~~~v~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (289)
++++|+||||||.+|+.+|.+ +|+ .+++.+... .......... ...+...+...................
T Consensus 78 ~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~--~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (242)
T 2k2q_B 78 RPFVLFGHSMGGMITFRLAQKLEREGIFPQ--AVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMSF 155 (242)
T ss_dssp SSCEEECCSSCCHHHHHHHHHHHHHHCSSC--SEEEEEEECSCCCSCCCSSCTTHHHHHTTCCTTCCCCTTTHHHHTTTT
T ss_pred CCEEEEeCCHhHHHHHHHHHHHHHcCCCCC--EEEEECCCCCCCCcccccCCCHHHHHHHHHHhCCCChHHhcCHHHHHH
Confidence 589999999999999999987 444 333332111 1110000000 011111110000000000000000000
Q ss_pred Chhhhhhhhc--cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHH
Q 022960 189 TQESLMDRLS--TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQ 265 (289)
Q Consensus 189 ~~~~~~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~ 265 (289)
....+...+. .... .....++++|+|+++|++|.+++ .....+.+..++.+++.+++ ||+++ ++++++++.|.+
T Consensus 156 ~~~~~~~~~~~~~~~~-~~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~-gH~~~~e~p~~~~~~i~~ 232 (242)
T 2k2q_B 156 FLPSFRSDYRALEQFE-LYDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAKDITFHQFDG-GHMFLLSQTEEVAERIFA 232 (242)
T ss_dssp CCSCHHHHHHHHTCCC-CSCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTCCCSEEEEEEC-CCSHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cCCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHhcCCeEEEEeC-CceeEcCCHHHHHHHHHH
Confidence 0000000000 0000 00122468999999999999875 44566777778888888885 99965 667899999999
Q ss_pred HHHhh
Q 022960 266 FIKAN 270 (289)
Q Consensus 266 fl~~~ 270 (289)
||++.
T Consensus 233 fl~~~ 237 (242)
T 2k2q_B 233 ILNQH 237 (242)
T ss_dssp HHHTT
T ss_pred Hhhcc
Confidence 99754
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=171.46 Aligned_cols=209 Identities=18% Similarity=0.141 Sum_probs=135.5
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHH-HHHHhcCCceEE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV-QDFCAKGRVITA 120 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i-~~l~~~~~~~~~ 120 (289)
.+.+++|||+||++++.....|..+.+.|.. +|.|+++|+||||.|... ..+++.+++++.+.+ +.+ +.++++
T Consensus 64 ~~~~~~lvllhG~~~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~--~~~~~~~a~~~~~~l~~~~---~~~~~~ 137 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPHEFTRLAGALRG-IAPVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRTQ---GDKPFV 137 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTTTTHHHHHHTSS-SCCBCCCCCTTSSTTCCB--CSSHHHHHHHHHHHHHHHC---SSCCEE
T ss_pred CCCCCeEEEECCCcccCcHHHHHHHHHhcCC-CceEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhc---CCCCEE
Confidence 4578999999999987621248889988875 499999999999998654 346777777776433 333 567899
Q ss_pred EEEeChhHHHHHHHHHhCC---C-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhh---h
Q 022960 121 IIGHSKGGNAVLLYASKYN---D-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQES---L 193 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 193 (289)
|+||||||.+++.++.++| + ++++|++++.......... .+...+....+.. .. ....... +
T Consensus 138 LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~---~~~~~~~~~~~ 206 (300)
T 1kez_A 138 VAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMN----AWLEELTATLFDR----ET---VRMDDTRLTAL 206 (300)
T ss_dssp EECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHH----HHHHHHHGGGCCC----CS---SCCCHHHHHHH
T ss_pred EEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHH----HHHHHHHHHHHhC----cC---CccchHHHHHH
Confidence 9999999999999999987 3 9999999986543321111 1111111110100 00 0000000 0
Q ss_pred hhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC-CcEEEEEcCCCcccc--cCchHHHHHHHHHHHhh
Q 022960 194 MDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP-NHKLHIIEGADHEFT--SHQDELASLVIQFIKAN 270 (289)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~ 270 (289)
..... ........++++|+++++|+ |..+++.. ..+.+.++ +.+++++++ ||+.+ +.++++++.|.+||++.
T Consensus 207 ~~~~~--~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~fl~~~ 281 (300)
T 1kez_A 207 GAYDR--LTGQWRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLGGG 281 (300)
T ss_dssp HHHHH--HTTTCCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHHHHHTCC
T ss_pred HHHHH--HHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcCCCCeEEEecC-CChhhccccHHHHHHHHHHHHHhc
Confidence 11100 00011123568999999995 55565554 34555555 479999999 99965 56789999999999865
Q ss_pred cC
Q 022960 271 YQ 272 (289)
Q Consensus 271 ~~ 272 (289)
..
T Consensus 282 ~~ 283 (300)
T 1kez_A 282 NS 283 (300)
T ss_dssp --
T ss_pred cC
Confidence 54
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-23 Score=167.41 Aligned_cols=239 Identities=14% Similarity=0.047 Sum_probs=149.9
Q ss_pred CcccceeeEEeeCCCCceEEEEEeec-------------------------CCCcEEEEEcCCCCCC---CCcchHHHHH
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHET-------------------------GSKQLVIVCHGFQSTK---DRIPMVNLAA 68 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~~-------------------------~~~~~iv~~hG~~~~~---~~~~~~~~~~ 68 (289)
..++..+++.+...+|..+..+..+. ++.|+||++||++... ....|..++.
T Consensus 59 ~~~v~~~dv~~~~~~gl~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~ 138 (365)
T 3ebl_A 59 LEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCR 138 (365)
T ss_dssp BTTEEEEEEEEETTTTEEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHH
T ss_pred CCCCceeeEEecCCCCceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHH
Confidence 34678899999988885555443121 1458999999987432 2223678888
Q ss_pred HHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-------CCc-eEEEEEeChhHHHHHHHHHhCC
Q 022960 69 ALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-------GRV-ITAIIGHSKGGNAVLLYASKYN 139 (289)
Q Consensus 69 ~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-------~~~-~~~l~G~S~Gg~~a~~~a~~~p 139 (289)
.|+.+ ||.|+.+|+|+.+.. .+....+|+.++++++.+. +.+ +++|+|+|+||.+|+.++.+.+
T Consensus 139 ~la~~~g~~Vv~~dyR~~p~~-------~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~ 211 (365)
T 3ebl_A 139 RFVKLSKGVVVSVNYRRAPEH-------RYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAA 211 (365)
T ss_dssp HHHHHHTSEEEEECCCCTTTS-------CTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEeeCCCCCCC-------CCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHH
Confidence 89886 999999999976533 2345678999999999743 455 8999999999999999988653
Q ss_pred ----CccEEEEeccCCccccccccccc--------chhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcc
Q 022960 140 ----DISIVINISGRFNLKRGIEGRLG--------LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHM 207 (289)
Q Consensus 140 ----~v~~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (289)
.++++|+++|.++.......... ......+.......... ... .... ........
T Consensus 212 ~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~----p~~~~~~~ 278 (365)
T 3ebl_A 212 DEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDAD----RDH-----PACN----PFGPNGRR 278 (365)
T ss_dssp HTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCC----TTS-----TTTC----TTSTTCCC
T ss_pred hcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCC----CCC-----cccC----CCCCcchh
Confidence 39999999998765432211100 00000000000000000 000 0000 00000011
Q ss_pred cc--cCceEEEEEeCCCCccCh--hhHHHHHhhCCCcEEEEEcCCCccccc-----CchHHHHHHHHHHHhhcCCCC
Q 022960 208 IC--QDCRVLTIHGTKDKMVPA--EDALEFDKFIPNHKLHIIEGADHEFTS-----HQDELASLVIQFIKANYQKDG 275 (289)
Q Consensus 208 ~~--~~~P~l~i~g~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~~~~~~~i~~fl~~~~~~~~ 275 (289)
+. --.|+|+++|++|.+++. ...+.+.+.-..+++++++|++|.+.. +.+++.+.+.+||++++.+.+
T Consensus 279 l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~~ 355 (365)
T 3ebl_A 279 LGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYGS 355 (365)
T ss_dssp CTTSCCCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC---
T ss_pred hccCCCCCEEEEEcCcccchhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence 10 025899999999987754 233444444457899999999998652 235799999999999987654
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.6e-24 Score=168.11 Aligned_cols=213 Identities=11% Similarity=0.080 Sum_probs=128.9
Q ss_pred CCCcEEEEEcCCCCCC-CCcchHHHHHHHHH-cCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceE
Q 022960 43 GSKQLVIVCHGFQSTK-DRIPMVNLAAALER-EGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVIT 119 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~-~~~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~ 119 (289)
++.|+||++||++... ....|..++..|+. .||.|+++|+||.+.. .+....+|+.++++++.+. +.+++
T Consensus 94 ~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~-------~~~~~~~d~~~~~~~l~~~~~~~~i 166 (326)
T 3d7r_A 94 QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEF-------HIDDTFQAIQRVYDQLVSEVGHQNV 166 (326)
T ss_dssp CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTS-------CHHHHHHHHHHHHHHHHHHHCGGGE
T ss_pred CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCC-------CchHHHHHHHHHHHHHHhccCCCcE
Confidence 3678999999966321 11347778888874 4999999999986542 2344567777777776554 77899
Q ss_pred EEEEeChhHHHHHHHHHhCCC-----ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhh
Q 022960 120 AIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLM 194 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (289)
+|+|||+||.+|+.++..+|+ ++++|+++|..+.......... ... ........ .........+.
T Consensus 167 ~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~-~~~---~~~~~~~~------~~~~~~~~~~~ 236 (326)
T 3d7r_A 167 VVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISD-ALI---EQDAVLSQ------FGVNEIMKKWA 236 (326)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCH-HHH---HHCSSCCH------HHHHHHHHHHH
T ss_pred EEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHh-hhc---ccCcccCH------HHHHHHHHHhc
Confidence 999999999999999987642 8999999997664322111000 000 00000000 00000000000
Q ss_pred hhhc-cc--hhhhhcccccCceEEEEEeCCCCccChh--hHHHHHhhCCCcEEEEEcCCCccccc----CchHHHHHHHH
Q 022960 195 DRLS-TD--IHAACHMICQDCRVLTIHGTKDKMVPAE--DALEFDKFIPNHKLHIIEGADHEFTS----HQDELASLVIQ 265 (289)
Q Consensus 195 ~~~~-~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~i~~ 265 (289)
.... .+ ...........+|+|+++|++|..++.. ..+.+.+..++++++++++++|.+.. +++++.+.|.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~ 316 (326)
T 3d7r_A 237 NGLPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAK 316 (326)
T ss_dssp TTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHH
T ss_pred CCCCCCCCeECcccCCcccCCCEEEEEeCcccchHHHHHHHHHHHHCCCcEEEEEeCCCcccccccCCHHHHHHHHHHHH
Confidence 0000 00 0000001111369999999999765421 23445555567899999999999653 34678999999
Q ss_pred HHHhhcC
Q 022960 266 FIKANYQ 272 (289)
Q Consensus 266 fl~~~~~ 272 (289)
||++.+.
T Consensus 317 fl~~~l~ 323 (326)
T 3d7r_A 317 SIDEDVT 323 (326)
T ss_dssp HHTSCCC
T ss_pred HHHHHhh
Confidence 9987654
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=158.68 Aligned_cols=193 Identities=19% Similarity=0.252 Sum_probs=138.5
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcC---ccEEEEccccCCCC--CC--------Cc----------cccchHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREG---ISAFRFDFSGNGES--EG--------SF----------LYGNYRRE 100 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G---~~v~~~d~~G~G~s--~~--------~~----------~~~~~~~~ 100 (289)
.+++|||+||++++... |..+++.|.+.| +.|+.+|.+++|.+ .+ +. .+.++...
T Consensus 3 ~~~pvv~iHG~~~~~~~--~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~ 80 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQNR--FDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQ 80 (250)
T ss_dssp SCCCEEEECCCGGGHHH--HHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHH
T ss_pred CCCCEEEECCCCCCHHH--HHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHH
Confidence 46789999999999865 999999999886 78998888877752 11 10 01156788
Q ss_pred HHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC-----CC-ccEEEEeccCCcccccccccccchhHhhhhhcC
Q 022960 101 AEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY-----ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNG 173 (289)
Q Consensus 101 ~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (289)
++++.++++.+.+. +.+++.++||||||.+++.++..+ +. |+++|++++++........
T Consensus 81 a~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~-------------- 146 (250)
T 3lp5_A 81 AVWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTT-------------- 146 (250)
T ss_dssp HHHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSS--------------
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccccc--------------
Confidence 99999999999776 778999999999999999999876 55 9999999987664321000
Q ss_pred cccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeC----CCCccChhhHHHHHhhCCC--cE--EEEE
Q 022960 174 FIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGT----KDKMVPAEDALEFDKFIPN--HK--LHII 245 (289)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~----~D~~~~~~~~~~~~~~~~~--~~--~~~~ 245 (289)
.....+.... .....+..++|+++|+|+ .|.+||.+.++.+...+++ .. .+.+
T Consensus 147 --------------~~~~~~~~l~-----~~~~~lp~~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v 207 (250)
T 3lp5_A 147 --------------AKTSMFKELY-----RYRTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITV 207 (250)
T ss_dssp --------------CCCHHHHHHH-----HTGGGSCTTCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEEC
T ss_pred --------------ccCHHHHHHH-----hccccCCCCceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEE
Confidence 0001111111 001111227899999999 9999999999887777654 22 3334
Q ss_pred c--CCCcccccCchHHHHHHHHHHHhhc
Q 022960 246 E--GADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 246 ~--~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
. +++|..+.+.+++.+.|.+||.+..
T Consensus 208 ~g~~a~H~~l~e~~~v~~~I~~FL~~~~ 235 (250)
T 3lp5_A 208 TGANTAHSDLPQNKQIVSLIRQYLLAET 235 (250)
T ss_dssp TTTTBSSCCHHHHHHHHHHHHHHTSCCC
T ss_pred eCCCCchhcchhCHHHHHHHHHHHhccc
Confidence 3 4679977556699999999996543
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-23 Score=156.53 Aligned_cols=204 Identities=20% Similarity=0.242 Sum_probs=139.4
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCc---cEEEEccccCCC------C----CCC-------ccccchHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGI---SAFRFDFSGNGE------S----EGS-------FLYGNYRREAED 103 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~---~v~~~d~~G~G~------s----~~~-------~~~~~~~~~~~d 103 (289)
.+++|||+||++++... |..+++.|.++++ .++.++..++|. + ..+ ....++..++++
T Consensus 2 ~~~pvvllHG~~~~~~~--~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 79 (254)
T 3ds8_A 2 DQIPIILIHGSGGNASS--LDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKW 79 (254)
T ss_dssp CCCCEEEECCTTCCTTT--THHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHH
T ss_pred CCCCEEEECCCCCCcch--HHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHH
Confidence 46789999999999865 8999999999754 344444443331 1 112 123467888999
Q ss_pred HHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC------ccEEEEeccCCcccccccccccchhHhhhhhcCccc
Q 022960 104 LRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND------ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID 176 (289)
Q Consensus 104 ~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~------v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (289)
+.++++.+.+. +.++++++||||||.+++.++.++|+ |+++|++++++.......... .+. ..
T Consensus 80 l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~------~~~---~~- 149 (254)
T 3ds8_A 80 LKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGM------DLS---FK- 149 (254)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCS------CTT---CS-
T ss_pred HHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccccc------ccc---cc-
Confidence 98888888665 77899999999999999999999874 899999999776542211000 000 00
Q ss_pred ccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeC------CCCccChhhHHHHHhhCCC----cEEEEEc
Q 022960 177 VRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGT------KDKMVPAEDALEFDKFIPN----HKLHIIE 246 (289)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~----~~~~~~~ 246 (289)
.. ......+.. + ......+.-++|++.|+|+ .|.+||...++.+...+++ .+...+.
T Consensus 150 -----~~---p~~~~~~~~-~----~~~~~~~~~~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~ 216 (254)
T 3ds8_A 150 -----KL---PNSTPQMDY-F----IKNQTEVSPDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQV 216 (254)
T ss_dssp -----SC---SSCCHHHHH-H----HHTGGGSCTTCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEE
T ss_pred -----cC---CcchHHHHH-H----HHHHhhCCCCcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEe
Confidence 00 000111111 1 1111112227899999999 9999999999999888875 3445565
Q ss_pred C--CCcccccCchHHHHHHHHHHHhhcC
Q 022960 247 G--ADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 247 ~--~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
+ ++|..+.+.+++.+.|..||++...
T Consensus 217 g~~a~Hs~l~~~~~v~~~i~~fL~~~~~ 244 (254)
T 3ds8_A 217 GEDAVHQTLHETPKSIEKTYWFLEKFKT 244 (254)
T ss_dssp SGGGCGGGGGGSHHHHHHHHHHHHTCCC
T ss_pred CCCCchhcccCCHHHHHHHHHHHHHhcC
Confidence 5 7799776677899999999998754
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-23 Score=165.04 Aligned_cols=214 Identities=14% Similarity=0.113 Sum_probs=135.6
Q ss_pred EEEEEeec---CCCcEEEEEcCCCCCCCC-cchHHHHHHHHH-cCccEEEEccccCCCCCCCccccchHHHHHHHHHHHH
Q 022960 35 LVGILHET---GSKQLVIVCHGFQSTKDR-IPMVNLAAALER-EGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 35 l~~~~~~~---~~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~ 109 (289)
+.++++.| ++.|+||++||++....+ ..|..++..|+. .||.|+++|+|+.++.. +....+|+.++++
T Consensus 67 i~~~~~~p~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-------~~~~~~D~~~a~~ 139 (322)
T 3fak_A 67 CAAEWVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP-------FPAAVEDGVAAYR 139 (322)
T ss_dssp EEEEEEECTTCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC-------TTHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC-------CCcHHHHHHHHHH
Confidence 55555544 357899999997732211 236777888876 49999999999866443 3455788888888
Q ss_pred HHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-----ccEEEEeccCCcccccccccc---------cchhHhhhhhcC
Q 022960 110 DFCAK--GRVITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNLKRGIEGRL---------GLGYLQRIKQNG 173 (289)
Q Consensus 110 ~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 173 (289)
++.++ +.++++|+|+|+||.+|+.++...++ ++++|+++|..+......... .......+....
T Consensus 140 ~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (322)
T 3fak_A 140 WLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADPMVAPGGINKMAARY 219 (322)
T ss_dssp HHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTTTTCCSCCSSHHHHHHHHH
T ss_pred HHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhCccCcccCHHHHHHHHHHh
Confidence 88776 55699999999999999999877543 899999999876542211100 000000000000
Q ss_pred cccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhh----CCCcEEEEEcCCC
Q 022960 174 FIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKF----IPNHKLHIIEGAD 249 (289)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~g 249 (289)
... .... ....... ........|+|+++|+.|.+++ .+..+++. -..++++++++++
T Consensus 220 ~~~----~~~~----------~~~~sp~---~~~~~~~pP~li~~g~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~ 280 (322)
T 3fak_A 220 LNG----ADAK----------HPYASPN---FANLKGLPPLLIHVGRDEVLLD--DSIKLDAKAKADGVKSTLEIWDDMI 280 (322)
T ss_dssp HTT----SCTT----------CTTTCGG---GSCCTTCCCEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCC
T ss_pred cCC----CCCC----------CcccCCC---cccccCCChHhEEEcCcCccHH--HHHHHHHHHHHcCCCEEEEEeCCce
Confidence 000 0000 0000000 0111123599999999998853 44444443 3467999999999
Q ss_pred ccccc------CchHHHHHHHHHHHhhcCCC
Q 022960 250 HEFTS------HQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 250 H~~~~------~~~~~~~~i~~fl~~~~~~~ 274 (289)
|.+.. +..++.+.+.+||++.+...
T Consensus 281 H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3fak_A 281 HVWHAFHPMLPEGKQAIVRVGEFMREQWAAL 311 (322)
T ss_dssp TTGGGGTTTCHHHHHHHHHHHHHHHHHHHC-
T ss_pred eehhhccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 98642 13678999999999988654
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-22 Score=157.62 Aligned_cols=224 Identities=13% Similarity=0.082 Sum_probs=137.7
Q ss_pred eeEEe-eCCCCceEEEEEeecC-----CCcEEEEEcCCCCCCCCcchHH---HHHHHHHcCccEEEEccccCCCCCCCc-
Q 022960 23 RRVVI-PNSHGEKLVGILHETG-----SKQLVIVCHGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGESEGSF- 92 (289)
Q Consensus 23 ~~~~~-~~~~g~~l~~~~~~~~-----~~~~iv~~hG~~~~~~~~~~~~---~~~~l~~~G~~v~~~d~~G~G~s~~~~- 92 (289)
+.+++ ....|..+.+.++.|. +.|+||++||++++... |.. +.+.+.+.||.|+++|++|+|.+....
T Consensus 16 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~--~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~ 93 (278)
T 3e4d_A 16 GVFSHQSETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHAN--VMEKGEYRRMASELGLVVVCPDTSPRGNDVPDEL 93 (278)
T ss_dssp EEEEEEETTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHH--HHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCT
T ss_pred EEEEEeccccCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCccc--hhhcccHHHHHhhCCeEEEecCCcccCccccccc
Confidence 34444 3456777887776542 46899999999988854 555 455556669999999999999875322
Q ss_pred ---------------------cccc-hHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEecc
Q 022960 93 ---------------------LYGN-YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISG 149 (289)
Q Consensus 93 ---------------------~~~~-~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 149 (289)
.... .....+++...++.....+.++++|+|||+||.+|+.++.++|+ ++++++++|
T Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 173 (278)
T 3e4d_A 94 TNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAP 173 (278)
T ss_dssp TCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESC
T ss_pred ccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCC
Confidence 0001 11223344444443211122789999999999999999999999 999999999
Q ss_pred CCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhh
Q 022960 150 RFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED 229 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 229 (289)
..+...... ........... ..... ...+...........+|+++++|++|.+++...
T Consensus 174 ~~~~~~~~~---~~~~~~~~~~~----------------~~~~~---~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~ 231 (278)
T 3e4d_A 174 IVAPSSADW---SEPALEKYLGA----------------DRAAW---RRYDACSLVEDGARFPEFLIDQGKADSFLEKGL 231 (278)
T ss_dssp CSCGGGCTT---THHHHHHHHCS----------------CGGGG---GGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHT
T ss_pred cccccCCcc---chhhHHHhcCC----------------cHHHH---HhcChhhHhhcCCCCCcEEEEecCCCcccccch
Confidence 766432111 00011111000 00000 001111111222236799999999999998532
Q ss_pred -HHHHHhhCC----CcEEEEEcCCCcccccCchHHHHHHHHHHHhhc
Q 022960 230 -ALEFDKFIP----NHKLHIIEGADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 230 -~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
++.+.+.+. ++++..++|++|.+.. -....+.+.+|+.+.+
T Consensus 232 ~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~-~~~~~~~~l~~~~~~l 277 (278)
T 3e4d_A 232 RPWLFEEAIKGTDIGLTLRMHDRYDHSYYF-ISTFMDDHLKWHAERL 277 (278)
T ss_dssp CTHHHHHHHTTSSCEEEEEEETTCCSSHHH-HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCceEEEeCCCCcCHHH-HHHHHHHHHHHHHHhc
Confidence 455544443 3689999999998532 2356667778887664
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=162.82 Aligned_cols=179 Identities=22% Similarity=0.293 Sum_probs=127.6
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccc------cCCCCCCC-------c---cccchHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFS------GNGESEGS-------F---LYGNYRREAEDLR 105 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~------G~G~s~~~-------~---~~~~~~~~~~d~~ 105 (289)
+.|+|||+||+|++... |..+++.|... ++.+++++-| |.|.+.-. . ....+....+++.
T Consensus 65 ~~plVI~LHG~G~~~~~--~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~ 142 (285)
T 4fhz_A 65 ATSLVVFLHGYGADGAD--LLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLD 142 (285)
T ss_dssp CSEEEEEECCTTBCHHH--HHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCCHHH--HHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHH
Confidence 56889999999998865 77788888765 6778887754 33432110 0 0111233345667
Q ss_pred HHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccc
Q 022960 106 AIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKK 181 (289)
Q Consensus 106 ~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (289)
++++.+... +.++++|+|+|+||.+++.++.++|+ +.++|.+++.+......
T Consensus 143 ~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~~------------------------ 198 (285)
T 4fhz_A 143 AFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERL------------------------ 198 (285)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHHH------------------------
T ss_pred HHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchhh------------------------
Confidence 777766544 45789999999999999999999999 99999998754321100
Q ss_pred cccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----CCcEEEEEcCCCcccccCch
Q 022960 182 GKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI----PNHKLHIIEGADHEFTSHQD 257 (289)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~ 257 (289)
.. ....++|++++||++|++||.+.++.+.+.+ .+++++++++.||.+ ..
T Consensus 199 ------------~~-----------~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i---~~ 252 (285)
T 4fhz_A 199 ------------AE-----------EARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGI---AP 252 (285)
T ss_dssp ------------HH-----------HCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSC---CH
T ss_pred ------------hh-----------hhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC---CH
Confidence 00 0022679999999999999999888776655 357899999999986 34
Q ss_pred HHHHHHHHHHHhhcCCC
Q 022960 258 ELASLVIQFIKANYQKD 274 (289)
Q Consensus 258 ~~~~~i~~fl~~~~~~~ 274 (289)
+..+.+.+||++++...
T Consensus 253 ~~l~~~~~fL~~~Lpd~ 269 (285)
T 4fhz_A 253 DGLSVALAFLKERLPDA 269 (285)
T ss_dssp HHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHCcCC
Confidence 55778999999998654
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=157.60 Aligned_cols=220 Identities=13% Similarity=0.054 Sum_probs=131.1
Q ss_pred CCCCceEEEEEeecC-----CCcEEEEEcCCCCCCCCcchHHH---HHHHHHcCccEEEEcc--ccCCCCCCC-------
Q 022960 29 NSHGEKLVGILHETG-----SKQLVIVCHGFQSTKDRIPMVNL---AAALEREGISAFRFDF--SGNGESEGS------- 91 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~-----~~~~iv~~hG~~~~~~~~~~~~~---~~~l~~~G~~v~~~d~--~G~G~s~~~------- 91 (289)
...|..+.+.++.|. +.|+||++||++++... |... .+.+++.||.|+++|+ ||+|.+...
T Consensus 24 ~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~--~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~ 101 (282)
T 3fcx_A 24 VELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQN--FISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGT 101 (282)
T ss_dssp TTTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSHH--HHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCC
T ss_pred hhcCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCccc--hhhcchHHHHhhcCCeEEEEeccccCccccccccccccccC
Confidence 446777877766442 46799999999998754 5544 5788888999999999 766653211
Q ss_pred ----c---cccch----HHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc
Q 022960 92 ----F---LYGNY----RREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG 156 (289)
Q Consensus 92 ----~---~~~~~----~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~ 156 (289)
. ....+ ......+.++++.+.+. +.++++|+|||+||.+|+.++..+|+ ++++++++|..+....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~ 181 (282)
T 3fcx_A 102 GAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181 (282)
T ss_dssp CCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGGS
T ss_pred CcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCcccC
Confidence 0 00011 11112222444444322 34689999999999999999999999 9999999987764321
Q ss_pred ccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhh------H
Q 022960 157 IEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED------A 230 (289)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~------~ 230 (289)
... .......... .............. .. ...+.+|+++++|++|.++|... .
T Consensus 182 ~~~---~~~~~~~~~~--------~~~~~~~~~~~~~~--------~~--~~~~~~p~li~~G~~D~~v~~~~~~~~~~~ 240 (282)
T 3fcx_A 182 PWG---KKAFSGYLGT--------DQSKWKAYDATHLV--------KS--YPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240 (282)
T ss_dssp HHH---HHHHHHHHC-----------CCGGGGCHHHHH--------TT--CC---CCEEEEEETTCHHHHTTSSCHHHHH
T ss_pred chh---HHHHHHhcCC--------chhhhhhcCHHHHH--------Hh--cccCCCcEEEEcCCCCcccccchhhHHHHH
Confidence 100 0000000000 00000000000000 00 11237899999999999986544 4
Q ss_pred HHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHhhcC
Q 022960 231 LEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
+.+.+.-.++++++++|++|.+.. -..+.....+|+.+.+.
T Consensus 241 ~~l~~~g~~~~~~~~~g~~H~~~~-~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 241 AACTEKKIPVVFRLQEDYDHSYYF-IATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHTTCCEEEEEETTCCSSHHH-HHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCceEEEECCCCCcCHHH-HHhhhHHHHHHHHHhhc
Confidence 445555556899999999998632 23456666677777654
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.5e-23 Score=155.67 Aligned_cols=192 Identities=15% Similarity=0.190 Sum_probs=125.2
Q ss_pred CCcEEEEEcCCCCCCCCcchH----HHHHHHHHcCccEEEEccc---------------------cCCCCCCCc------
Q 022960 44 SKQLVIVCHGFQSTKDRIPMV----NLAAALEREGISAFRFDFS---------------------GNGESEGSF------ 92 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~----~~~~~l~~~G~~v~~~d~~---------------------G~G~s~~~~------ 92 (289)
.+|+||++||++++... |. .+.+.|.+.||+|+.+|+| |+|.+....
T Consensus 4 ~~~~vl~lHG~g~~~~~--~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~ 81 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKV--FSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEIS 81 (243)
T ss_dssp CCCEEEEECCTTCCHHH--HHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSG
T ss_pred cCceEEEeCCCCccHHH--HHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCc
Confidence 46899999999999854 44 5777888779999999999 444432111
Q ss_pred cccchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC-------CCccEEEEeccCCcccccccccccchh
Q 022960 93 LYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY-------NDISIVINISGRFNLKRGIEGRLGLGY 165 (289)
Q Consensus 93 ~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-------p~v~~~v~~~~~~~~~~~~~~~~~~~~ 165 (289)
...++...++.+.+.++. ...+++|+||||||.+|+.++.+. |.++.++++++........ .
T Consensus 82 ~~~d~~~~~~~l~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~------~- 150 (243)
T 1ycd_A 82 HELDISEGLKSVVDHIKA----NGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP------E- 150 (243)
T ss_dssp GGCCCHHHHHHHHHHHHH----HCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT------T-
T ss_pred chhhHHHHHHHHHHHHHh----cCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc------c-
Confidence 012333333444433332 225689999999999999999875 4477888887754321110 0
Q ss_pred HhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc-----
Q 022960 166 LQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH----- 240 (289)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----- 240 (289)
. .... .... .+...+ . ...++++|+|+++|++|.++|++.++.+++.+++.
T Consensus 151 ---~--~~~~-----------~~~~-~~~~~~-----~--~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~ 206 (243)
T 1ycd_A 151 ---H--PGEL-----------RITE-KFRDSF-----A--VKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNK 206 (243)
T ss_dssp ---S--TTCE-----------EECG-GGTTTT-----C--CCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCT
T ss_pred ---c--cccc-----------ccch-hHHHhc-----c--CcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccc
Confidence 0 0000 0000 000000 0 11235899999999999999999999888877653
Q ss_pred --EEEEEcCCCcccccCchHHHHHHHHHHHhhcCC
Q 022960 241 --KLHIIEGADHEFTSHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 241 --~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~~ 273 (289)
..+.++++||.+..+ +++.+.+.+||++.+..
T Consensus 207 ~~~~~~~~~~gH~~~~~-~~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 207 EKVLAYEHPGGHMVPNK-KDIIRPIVEQITSSLQE 240 (243)
T ss_dssp TTEEEEEESSSSSCCCC-HHHHHHHHHHHHHHHC-
T ss_pred cccEEEecCCCCcCCch-HHHHHHHHHHHHHhhhh
Confidence 667788889987543 46999999999987753
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.9e-22 Score=154.67 Aligned_cols=223 Identities=15% Similarity=0.082 Sum_probs=137.2
Q ss_pred eeEEee-CCCCceEEEEEeecC------CCcEEEEEcCCCCCCCCcchHH---HHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 23 RRVVIP-NSHGEKLVGILHETG------SKQLVIVCHGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 23 ~~~~~~-~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~~~~---~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
+.+.+. ..+|..+.+.++.|. +.|+||++||++++... |.. +.+.+.+.|+.|+++|.+++|.+....
T Consensus 18 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~--~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~ 95 (280)
T 3i6y_A 18 KQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDEN--FMQKAGAQRLAAELGIAIVAPDTSPRGEGVADD 95 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSH--HHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCC
T ss_pred EEEEEeccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhH--HhhcccHHHHHhhCCeEEEEeCCcccccccCcc
Confidence 344443 356777887766442 46899999999998865 444 456666779999999999777643211
Q ss_pred c---------------------ccch-HHHHHHHHHHHHHHHhcCC-ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEec
Q 022960 93 L---------------------YGNY-RREAEDLRAIVQDFCAKGR-VITAIIGHSKGGNAVLLYASKYND-ISIVINIS 148 (289)
Q Consensus 93 ~---------------------~~~~-~~~~~d~~~~i~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~ 148 (289)
. ...+ ....+++..+++... .. ++++|+|||+||.+|+.++.++|+ ++++|+++
T Consensus 96 ~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s 173 (280)
T 3i6y_A 96 EGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMF--PVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFS 173 (280)
T ss_dssp SSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHS--SEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEES
T ss_pred cccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhC--CCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeC
Confidence 0 0011 222345555544322 33 689999999999999999999999 99999999
Q ss_pred cCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChh
Q 022960 149 GRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAE 228 (289)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 228 (289)
|..+...... ........... ....+ ...+........+..+|+++++|++|.+++.+
T Consensus 174 ~~~~~~~~~~---~~~~~~~~~~~----------------~~~~~---~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~ 231 (280)
T 3i6y_A 174 PINNPVNCPW---GQKAFTAYLGK----------------DTDTW---REYDASLLMRAAKQYVPALVDQGEADNFLAEQ 231 (280)
T ss_dssp CCCCGGGSHH---HHHHHHHHHCS----------------CGGGT---GGGCHHHHHHHCSSCCCEEEEEETTCTTHHHH
T ss_pred CccccccCch---HHHHHHHhcCC----------------chHHH---HhcCHHHHHHhcCCCccEEEEEeCCCccccch
Confidence 9766432110 00001111000 00000 00111111111111479999999999999874
Q ss_pred h-HHHHHh----hCCCcEEEEEcCCCcccccCchHHHHHHHHHHHhhcC
Q 022960 229 D-ALEFDK----FIPNHKLHIIEGADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 229 ~-~~~~~~----~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
. ++.+.+ .-.++++++++|++|.+.. -.++.+.+.+|+.+.+.
T Consensus 232 ~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~-~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 232 LKPEVLEAAASSNNYPLELRSHEGYDHSYYF-IASFIEDHLRFHSNYLN 279 (280)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEETTCCSSHHH-HHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHcCCCceEEEeCCCCccHHH-HHHhHHHHHHHHHhhcc
Confidence 3 444433 3346799999999998631 24566777788877663
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-22 Score=172.97 Aligned_cols=244 Identities=14% Similarity=0.156 Sum_probs=156.4
Q ss_pred eCCCCce--EEEEEeecC---CCcEEEEEcCCCCCCCC------------------------------------------
Q 022960 28 PNSHGEK--LVGILHETG---SKQLVIVCHGFQSTKDR------------------------------------------ 60 (289)
Q Consensus 28 ~~~~g~~--l~~~~~~~~---~~~~iv~~hG~~~~~~~------------------------------------------ 60 (289)
+..||.+ |.+.++.|. +-|+||..||++.....
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 258 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKSTEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKELPIV 258 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCSSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCCCEE
T ss_pred cCCCCCeeeEEEEEEecCCCCcccEEEecCCcCCCCcccccccccccccccccccCcccccccccccccccccccccccc
Confidence 5689999 999988764 45789989998754110
Q ss_pred ----cch-----HHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-----------------
Q 022960 61 ----IPM-----VNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK----------------- 114 (289)
Q Consensus 61 ----~~~-----~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~----------------- 114 (289)
..| ..+.+.|+++||.|+++|+||+|.|.+...... ...++|+.++++++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~~~~-~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~ 337 (763)
T 1lns_A 259 DKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSGD-YQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASW 337 (763)
T ss_dssp SSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTTS-HHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTT
T ss_pred ccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCCCCC-HHHHHHHHHHHHHHhhcccccccccccccccccC
Confidence 001 135688999999999999999999988754433 35689999999999732
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc--------ccchhHhhhhhcCccccccccc---
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR--------LGLGYLQRIKQNGFIDVRNKKG--- 182 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~--- 182 (289)
...+|+++|+|+||.+++.+|..+|+ ++++|..++..+........ ........+....+........
T Consensus 338 ~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~~~ 417 (763)
T 1lns_A 338 ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLK 417 (763)
T ss_dssp EEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHH
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhcCcchhhh
Confidence 13589999999999999999999988 99999998876432211100 0000000000000000000000
Q ss_pred -ccccccChhhhh-----------hhh-ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC--cEEEEEcC
Q 022960 183 -KLEYRVTQESLM-----------DRL-STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN--HKLHIIEG 247 (289)
Q Consensus 183 -~~~~~~~~~~~~-----------~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~ 247 (289)
...+......+. ..+ ..+... ...+|++|+|+++|..|..+|+..+..+++.+++ ....++.+
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~--~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~i~~ 495 (763)
T 1lns_A 418 GNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLI--NTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHR 495 (763)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGG--GGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEES
T ss_pred HHHHHHHHHHHHHhhhhhccCchhHHhhccChhh--HhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEEEEeC
Confidence 000000000000 000 001111 1225689999999999999999999999999874 34445577
Q ss_pred CCccccc--CchHHHHHHHHHHHhhcCCC
Q 022960 248 ADHEFTS--HQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 248 ~gH~~~~--~~~~~~~~i~~fl~~~~~~~ 274 (289)
++|.... ...++.+.+.+||++++...
T Consensus 496 ~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg~ 524 (763)
T 1lns_A 496 GAHIYMNSWQSIDFSETINAYFVAKLLDR 524 (763)
T ss_dssp CSSCCCTTBSSCCHHHHHHHHHHHHHTTC
T ss_pred CcccCccccchHHHHHHHHHHHHHHhcCC
Confidence 8999653 34678999999999998754
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=163.66 Aligned_cols=179 Identities=16% Similarity=0.182 Sum_probs=129.6
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc---------------------cc-------c
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF---------------------LY-------G 95 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~---------------------~~-------~ 95 (289)
+.|+||++||++++... |..+++.|+++||.|+++|+||+|.+.... .. .
T Consensus 97 ~~P~Vv~~HG~~~~~~~--~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 174 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTL--YSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNE 174 (383)
T ss_dssp CEEEEEEECCTTCCTTT--THHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCchH--HHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHH
Confidence 56899999999998865 889999999999999999999998874210 00 1
Q ss_pred chHHHHHHHHHHHHHHHh--------------------c---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCc
Q 022960 96 NYRREAEDLRAIVQDFCA--------------------K---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFN 152 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~--------------------~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~ 152 (289)
.+...++|+..+++++.+ . +.++++++|||+||.+++.++...+.++++|+++++..
T Consensus 175 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~v~a~v~~~~~~~ 254 (383)
T 3d59_A 175 QVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMF 254 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCCT
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCCCccEEEEeCCccC
Confidence 122335788888888864 1 34589999999999999999988888999999987532
Q ss_pred ccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHH
Q 022960 153 LKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE 232 (289)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 232 (289)
... .. .. .++++|+|+++|++|..++ ..+.
T Consensus 255 p~~----------------------------------~~------------~~--~~i~~P~Lii~g~~D~~~~--~~~~ 284 (383)
T 3d59_A 255 PLG----------------------------------DE------------VY--SRIPQPLFFINSEYFQYPA--NIIK 284 (383)
T ss_dssp TCC----------------------------------GG------------GG--GSCCSCEEEEEETTTCCHH--HHHH
T ss_pred CCc----------------------------------hh------------hh--ccCCCCEEEEecccccchh--hHHH
Confidence 100 00 00 1347899999999998543 2333
Q ss_pred HHh---hCCCcEEEEEcCCCccccc--------------------Cch----HHHHHHHHHHHhhcCCC
Q 022960 233 FDK---FIPNHKLHIIEGADHEFTS--------------------HQD----ELASLVIQFIKANYQKD 274 (289)
Q Consensus 233 ~~~---~~~~~~~~~~~~~gH~~~~--------------------~~~----~~~~~i~~fl~~~~~~~ 274 (289)
+.+ .....+++++++++|.++. +++ .+.+.+.+||++++...
T Consensus 285 ~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 285 MKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp HHTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 322 2346799999999998631 222 24457899999988654
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.2e-22 Score=152.61 Aligned_cols=229 Identities=12% Similarity=0.099 Sum_probs=143.2
Q ss_pred cceeeEEeeC-CCCceEEEEEeecC----------CCcEEEEEcCCCCCCCCcchHH--HHHHHH-HcCccEEEEccccC
Q 022960 20 VQRRRVVIPN-SHGEKLVGILHETG----------SKQLVIVCHGFQSTKDRIPMVN--LAAALE-REGISAFRFDFSGN 85 (289)
Q Consensus 20 ~~~~~~~~~~-~~g~~l~~~~~~~~----------~~~~iv~~hG~~~~~~~~~~~~--~~~~l~-~~G~~v~~~d~~G~ 85 (289)
|..+++++.+ ..|..+.++++.|. +.|+||++||++++... |.. ....+. +.|+.|+.+|++++
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~ 82 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHNS--WLKRTNVERLLRGTNLIVVMPNTSNG 82 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTTH--HHHHSCHHHHTTTCCCEEEECCCTTS
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHHH--HHhccCHHHHHhcCCeEEEEECCCCC
Confidence 4455666654 35667777766442 45899999999988864 555 344554 46899999999988
Q ss_pred CCCCCCccccchHHHHHHHHHHHHHHHh-c--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc-
Q 022960 86 GESEGSFLYGNYRREAEDLRAIVQDFCA-K--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR- 160 (289)
Q Consensus 86 G~s~~~~~~~~~~~~~~d~~~~i~~l~~-~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~- 160 (289)
+.+............++|+..+++.+.. . +.++++++|||+||.+++.++. +|+ ++++|+++|...........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~~~ 161 (263)
T 2uz0_A 83 WYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPESQ 161 (263)
T ss_dssp TTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGGGT
T ss_pred ccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhcccccc
Confidence 7765443333345566788888877643 2 3468999999999999999999 888 99999999987654311000
Q ss_pred --ccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC-
Q 022960 161 --LGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI- 237 (289)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~- 237 (289)
....+........ ... .....+.........-.+|+++++|++|.+++ .++.+.+.+
T Consensus 162 ~~~~~~~~~~~~~~~--------~~~----------~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~ 221 (263)
T 2uz0_A 162 NLGSPAYWRGVFGEI--------RDW----------TTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLK 221 (263)
T ss_dssp TCSCHHHHHHHHCCC--------SCT----------TTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHH
T ss_pred ccccchhHHHHcCCh--------hhh----------ccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHH
Confidence 0000000000000 000 00001111111111112799999999999884 234444433
Q ss_pred ---CCcEEEEEcCCCcccccCchHHHHHHHHHHHhhcCC
Q 022960 238 ---PNHKLHIIEGADHEFTSHQDELASLVIQFIKANYQK 273 (289)
Q Consensus 238 ---~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~~ 273 (289)
.+.+++.++| +|.+.. ..+..+.+.+||.+.+..
T Consensus 222 ~~g~~~~~~~~~g-~H~~~~-~~~~~~~~~~~l~~~l~~ 258 (263)
T 2uz0_A 222 KLGFDVTYSHSAG-THEWYY-WEKQLEVFLTTLPIDFKL 258 (263)
T ss_dssp HTTCEEEEEEESC-CSSHHH-HHHHHHHHHHHSSSCCCC
T ss_pred HCCCCeEEEECCC-CcCHHH-HHHHHHHHHHHHHhhccc
Confidence 2468999998 998631 245678888899877754
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-21 Score=151.53 Aligned_cols=124 Identities=15% Similarity=0.094 Sum_probs=92.5
Q ss_pred eeEEee---CCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcch-HHHHHHHHHcCccEEEEccc-----------
Q 022960 23 RRVVIP---NSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPM-VNLAAALEREGISAFRFDFS----------- 83 (289)
Q Consensus 23 ~~~~~~---~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~~----------- 83 (289)
..+++. ..+|.++.++++.|. +.|+||++||++++... | ..+.+.+.+.||.|+++|+|
T Consensus 25 ~~~~~~~~~~~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~ 102 (304)
T 3d0k_A 25 NAIPYLDDDRNADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGAD--YRDFWIPAADRHKLLIVAPTFSDEIWPGVESYN 102 (304)
T ss_dssp EEEEECC---CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHHH--HHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTT
T ss_pred ceEEecccCCCCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHHH--HHHHHHHHHHHCCcEEEEeCCccccCCCccccc
Confidence 345555 567888888766543 46899999999998754 5 67788898899999999999
Q ss_pred -cC--CCCCCCccccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC--ccEEEEeccC
Q 022960 84 -GN--GESEGSFLYGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND--ISIVINISGR 150 (289)
Q Consensus 84 -G~--G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~ 150 (289)
|+ |.|....... ....+|+.++++++.+. +.++++|+|||+||.+++.++..+|+ ++++|+.++.
T Consensus 103 ~g~~~g~s~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 103 NGRAFTAAGNPRHVD--GWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp TTTCBCTTSCBCCGG--GSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCS
T ss_pred cCccccccCCCCccc--chHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCc
Confidence 55 6654432110 12235677777777664 46799999999999999999999994 8899877743
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-21 Score=149.73 Aligned_cols=224 Identities=15% Similarity=0.088 Sum_probs=136.8
Q ss_pred eeEEeeC-CCCceEEEEEeecC------CCcEEEEEcCCCCCCCCcchHH---HHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 23 RRVVIPN-SHGEKLVGILHETG------SKQLVIVCHGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 23 ~~~~~~~-~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~~~~---~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
+.+.+.+ ..|..+.+.++.|. +.|+||++||++++... |.. +.+.+.+.|+.|+++|.+++|.+....
T Consensus 16 ~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~--~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~ 93 (280)
T 3ls2_A 16 KQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDEN--FMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNE 93 (280)
T ss_dssp EEEEEEETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHH--HHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCC
T ss_pred EEEEEechhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhh--hhcchhHHHHHhhCCeEEEEeCCcccccccccc
Confidence 3444443 56778887776543 35799999999988754 443 456667779999999998776542111
Q ss_pred c---------------------ccc-hHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEecc
Q 022960 93 L---------------------YGN-YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISG 149 (289)
Q Consensus 93 ~---------------------~~~-~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 149 (289)
. ... .....+++..+++.... ..++++|+|||+||.+|+.++.++|+ ++++++++|
T Consensus 94 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~ 172 (280)
T 3ls2_A 94 DSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFP-VTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSP 172 (280)
T ss_dssp SCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSS-EEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESC
T ss_pred cccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCC-CCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecC
Confidence 0 001 12223444444443321 12689999999999999999999999 999999999
Q ss_pred CCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccc--cCceEEEEEeCCCCccCh
Q 022960 150 RFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMIC--QDCRVLTIHGTKDKMVPA 227 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~l~i~g~~D~~~~~ 227 (289)
..+...... ........... .. ..+ ...+......... ..+|+++++|++|.+++.
T Consensus 173 ~~~~~~~~~---~~~~~~~~~g~--------~~--------~~~---~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~ 230 (280)
T 3ls2_A 173 IVNPINCPW---GVKAFTGYLGA--------DK--------TTW---AQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDE 230 (280)
T ss_dssp CSCGGGSHH---HHHHHHHHHCS--------CG--------GGT---GGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCC
T ss_pred ccCcccCcc---hhhHHHhhcCc--------hH--------HHH---HhcCHHHHHHhccccCCCcEEEEEeCCCcccCC
Confidence 766432110 00000111000 00 000 0001111111111 267999999999999987
Q ss_pred h-----hHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHhhcC
Q 022960 228 E-----DALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 228 ~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
+ ..+.+.+.-.++++++++|++|.+.. -......+.+|+.+.+.
T Consensus 231 ~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~-~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 231 QLKPQNLVAVAKQKDYPLTLEMQTGYDHSYFF-ISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEETTCCSSHHH-HHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHhCCCceEEEeCCCCCchhh-HHHHHHHHHHHHHHHhc
Confidence 3 23444444456899999999998632 23456667788887653
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.2e-22 Score=150.19 Aligned_cols=200 Identities=14% Similarity=0.162 Sum_probs=129.6
Q ss_pred ceeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccCC----------
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNG---------- 86 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G---------- 86 (289)
..+.+.+.+ ..+.+.+..|. .+++|||+||+|++... |..+++.|... ++.+++++-|-..
T Consensus 14 ~~~~~~~~~---~~l~y~ii~P~~~~~~~VI~LHG~G~~~~d--l~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~ 88 (246)
T 4f21_A 14 GTENLYFQS---NAMNYELMEPAKQARFCVIWLHGLGADGHD--FVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMR 88 (246)
T ss_dssp ------------CCCCEEEECCSSCCCEEEEEEEC--CCCCC--GGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHH
T ss_pred ccceEEEec---CCcCceEeCCCCcCCeEEEEEcCCCCCHHH--HHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcc
Confidence 344455543 24556666654 56799999999999876 66677766543 5778888754210
Q ss_pred ----CCCCC-------ccccchHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 87 ----ESEGS-------FLYGNYRREAEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 87 ----~s~~~-------~~~~~~~~~~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
..... .........++.+..+++...+. +.++++++|+|+||.+++.++.++|+ +.++|.+++.+.
T Consensus 89 ~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp 168 (246)
T 4f21_A 89 AWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLP 168 (246)
T ss_dssp SCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCT
T ss_pred cccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccC
Confidence 00000 01122344455666666665544 55789999999999999999999999 999999998654
Q ss_pred ccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHH
Q 022960 153 LKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE 232 (289)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 232 (289)
......... .....++|++++||++|++||.+.++.
T Consensus 169 ~~~~~~~~~--------------------------------------------~~~~~~~Pvl~~HG~~D~vVp~~~~~~ 204 (246)
T 4f21_A 169 AWDNFKGKI--------------------------------------------TSINKGLPILVCHGTDDQVLPEVLGHD 204 (246)
T ss_dssp THHHHSTTC--------------------------------------------CGGGTTCCEEEEEETTCSSSCHHHHHH
T ss_pred ccccccccc--------------------------------------------cccccCCchhhcccCCCCccCHHHHHH
Confidence 321110000 000126799999999999999998887
Q ss_pred HHhhCC----CcEEEEEcCCCcccccCchHHHHHHHHHHHhhcC
Q 022960 233 FDKFIP----NHKLHIIEGADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 233 ~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
+.+.+. ++++..++|.||.+ ..+..+.+.+||++.++
T Consensus 205 ~~~~L~~~g~~v~~~~y~g~gH~i---~~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 205 LSDKLKVSGFANEYKHYVGMQHSV---CMEEIKDISNFIAKTFK 245 (246)
T ss_dssp HHHHHHTTTCCEEEEEESSCCSSC---CHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCeEEEEECCCCCcc---CHHHHHHHHHHHHHHhC
Confidence 766653 46889999999986 34556789999998874
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.6e-22 Score=156.01 Aligned_cols=200 Identities=11% Similarity=0.051 Sum_probs=128.6
Q ss_pred CCCcEEEEEcCCCCCCCCcchH-HHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMV-NLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITA 120 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~ 120 (289)
+.+++|||+||++++... .|. .+.+.|.++||.|+++|+||||.++ .....+++.+.++.+.+. +.++++
T Consensus 29 ~~~~~VvllHG~~~~~~~-~~~~~l~~~L~~~G~~v~~~d~~g~g~~~-------~~~~~~~l~~~i~~~~~~~g~~~v~ 100 (317)
T 1tca_A 29 SVSKPILLVPGTGTTGPQ-SFDSNWIPLSTQLGYTPCWISPPPFMLND-------TQVNTEYMVNAITALYAGSGNNKLP 100 (317)
T ss_dssp SCSSEEEEECCTTCCHHH-HHTTTHHHHHHTTTCEEEEECCTTTTCSC-------HHHHHHHHHHHHHHHHHHTTSCCEE
T ss_pred CCCCeEEEECCCCCCcch-hhHHHHHHHHHhCCCEEEEECCCCCCCCc-------HHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 456789999999998742 266 7899999989999999999998753 233456666677666554 567999
Q ss_pred EEEeChhHHHHHHHHHhCC---C-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhh
Q 022960 121 IIGHSKGGNAVLLYASKYN---D-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDR 196 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (289)
|+||||||.++..++..++ + |+++|+++++....... .+...+ ... . ...........+...
T Consensus 101 lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~------~~~~~~---~~~---~--~~~~~~~~~s~f~~~ 166 (317)
T 1tca_A 101 VLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLA------GPLDAL---AVS---A--PSVWQQTTGSALTTA 166 (317)
T ss_dssp EEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGG------HHHHHT---TCB---C--HHHHHTBTTCHHHHH
T ss_pred EEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcch------hhhhhh---hhc---C--chHHhhCcCcHHHHH
Confidence 9999999999999888765 5 99999999875432211 000000 000 0 000000000011111
Q ss_pred hccchhhhhcccccCceEEEEEeCCCCccChhh--HHHHHhhCCCcEEEEE-------cCCCcccccCchHHHHHHHHHH
Q 022960 197 LSTDIHAACHMICQDCRVLTIHGTKDKMVPAED--ALEFDKFIPNHKLHII-------EGADHEFTSHQDELASLVIQFI 267 (289)
Q Consensus 197 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~-------~~~gH~~~~~~~~~~~~i~~fl 267 (289)
+... ... ...+|+++|+|+.|.++++.. .+.....+++++.+.+ ++.+|..+.+..++...|.+||
T Consensus 167 L~~~---~~~--~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~a~~~~~~~~~~~~~~~gH~~~l~~p~~~~~v~~~L 241 (317)
T 1tca_A 167 LRNA---GGL--TQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNGKNVQAQAVCGPLFVIDHAGSLTSQFSYVVGRSAL 241 (317)
T ss_dssp HHHT---TTT--BCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBTSEEEEHHHHHCTTCCCCTTHHHHBHHHHHHHHHHH
T ss_pred HHhc---CCC--CCCCCEEEEEeCCCCeECCccccccchhhhccCCccEEeeeccCCCCccCcccccCCHHHHHHHHHHh
Confidence 1100 000 136899999999999998776 3333334445554444 4789996655566778899999
Q ss_pred Hh
Q 022960 268 KA 269 (289)
Q Consensus 268 ~~ 269 (289)
+.
T Consensus 242 ~~ 243 (317)
T 1tca_A 242 RS 243 (317)
T ss_dssp HC
T ss_pred cC
Confidence 86
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-21 Score=156.42 Aligned_cols=195 Identities=14% Similarity=0.090 Sum_probs=135.9
Q ss_pred eeeEEeeCC-CCceEEEEEeecC------CCcEEEEEcCCCCCCCCcchHHH----------HHHHHHcCccEEEEcccc
Q 022960 22 RRRVVIPNS-HGEKLVGILHETG------SKQLVIVCHGFQSTKDRIPMVNL----------AAALEREGISAFRFDFSG 84 (289)
Q Consensus 22 ~~~~~~~~~-~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~~~~~----------~~~l~~~G~~v~~~d~~G 84 (289)
.+.+.+... +|.++.++++.|. +.|+||++||++++...+.+..+ .......|+.|+++|.+|
T Consensus 144 ~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g 223 (380)
T 3doh_A 144 FLAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPP 223 (380)
T ss_dssp EEEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCT
T ss_pred ccceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCC
Confidence 456778888 8999999877553 34799999999876543222211 112234578899999997
Q ss_pred CCCCCCCcc----ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc
Q 022960 85 NGESEGSFL----YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG 156 (289)
Q Consensus 85 ~G~s~~~~~----~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~ 156 (289)
.+....... ........+|+.++++++.+. +.++++|+|||+||.+++.++..+|+ ++++++++|.....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~~-- 301 (380)
T 3doh_A 224 NSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDVS-- 301 (380)
T ss_dssp TCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGG--
T ss_pred CCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCChh--
Confidence 654432111 111234456777777777655 33589999999999999999999999 99999999864100
Q ss_pred ccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhccccc-CceEEEEEeCCCCccChhhHHHHHh
Q 022960 157 IEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQ-DCRVLTIHGTKDKMVPAEDALEFDK 235 (289)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~ 235 (289)
... .+ .+|+|+++|++|.++|++.++.+.+
T Consensus 302 -----------------------------------------------~~~--~~~~~P~lii~G~~D~~vp~~~~~~~~~ 332 (380)
T 3doh_A 302 -----------------------------------------------KVE--RIKDIPIWVFHAEDDPVVPVENSRVLVK 332 (380)
T ss_dssp -----------------------------------------------GGG--GGTTSCEEEEEETTCSSSCTHHHHHHHH
T ss_pred -----------------------------------------------hhh--hccCCCEEEEecCCCCccCHHHHHHHHH
Confidence 000 11 4899999999999999998888777
Q ss_pred hCC----CcEEEEEcCC--------CcccccCchHHHH--HHHHHHHhh
Q 022960 236 FIP----NHKLHIIEGA--------DHEFTSHQDELAS--LVIQFIKAN 270 (289)
Q Consensus 236 ~~~----~~~~~~~~~~--------gH~~~~~~~~~~~--~i~~fl~~~ 270 (289)
.+. +.+++.++++ +|.. ...... .+.+||.++
T Consensus 333 ~l~~~g~~~~~~~~~~~~h~~h~~~~H~~---~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 333 KLAEIGGKVRYTEYEKGFMEKHGWDPHGS---WIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp HHHHTTCCEEEEEECTTHHHHTTCCTTCT---HHHHHTCHHHHHHHHTC
T ss_pred HHHHCCCceEEEEecCCcccCCCCCCchh---HHHhcCCHHHHHHHHhh
Confidence 653 4789999998 5542 123333 788999764
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-20 Score=145.92 Aligned_cols=203 Identities=16% Similarity=0.135 Sum_probs=132.4
Q ss_pred cceeeEEeeCC-CCceEEEEEeecC------CCcEEEEEcCCCCCCCCcc-----hHHHHHHHHHc----CccEEEEccc
Q 022960 20 VQRRRVVIPNS-HGEKLVGILHETG------SKQLVIVCHGFQSTKDRIP-----MVNLAAALERE----GISAFRFDFS 83 (289)
Q Consensus 20 ~~~~~~~~~~~-~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~-----~~~~~~~l~~~----G~~v~~~d~~ 83 (289)
-..+++.+.+. +|..+.++++.|. +.|+||++||++++...|. +..+++.|.+. |+.|+.+|++
T Consensus 30 g~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~ 109 (268)
T 1jjf_A 30 GQVVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTN 109 (268)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCC
T ss_pred ceEEEEEEeccccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCC
Confidence 34455666543 5667777766443 4689999999998765421 23457788776 4999999999
Q ss_pred cCCCCCCCccccchHHHHHH-HHHHHHHHHhc-----CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccc
Q 022960 84 GNGESEGSFLYGNYRREAED-LRAIVQDFCAK-----GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRG 156 (289)
Q Consensus 84 G~G~s~~~~~~~~~~~~~~d-~~~~i~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~ 156 (289)
+++.+... .+....++ +.++++++.+. +.++++|+|||+||.+++.++.++|+ ++++++++|.......
T Consensus 110 ~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~ 185 (268)
T 1jjf_A 110 AAGPGIAD----GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPN 185 (268)
T ss_dssp CCCTTCSC----HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCH
T ss_pred CCCccccc----cHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCch
Confidence 88764321 22333333 44555555443 24689999999999999999999999 9999999986543210
Q ss_pred ccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCc-eEEEEEeCCCCccChhhHHHHHh
Q 022960 157 IEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDC-RVLTIHGTKDKMVPAEDALEFDK 235 (289)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~ 235 (289)
...+.. ... . . .... |+++++|++|.++|. .+.+.+
T Consensus 186 ---------~~~~~~-----------------~~~-----------~--~--~~~~pp~li~~G~~D~~v~~--~~~~~~ 222 (268)
T 1jjf_A 186 ---------ERLFPD-----------------GGK-----------A--A--REKLKLLFIACGTNDSLIGF--GQRVHE 222 (268)
T ss_dssp ---------HHHCTT-----------------TTH-----------H--H--HHHCSEEEEEEETTCTTHHH--HHHHHH
T ss_pred ---------hhhcCc-----------------chh-----------h--h--hhcCceEEEEecCCCCCccH--HHHHHH
Confidence 000000 000 0 0 1134 599999999999874 333333
Q ss_pred ----hCCCcEEEEEcCCCcccccCchHHHHHHHHHHHhh
Q 022960 236 ----FIPNHKLHIIEGADHEFTSHQDELASLVIQFIKAN 270 (289)
Q Consensus 236 ----~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 270 (289)
.-.+++++++++++|.+.. ..+....+.+||.+.
T Consensus 223 ~l~~~g~~~~~~~~~g~~H~~~~-~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 223 YCVANNINHVYWLIQGGGHDFNV-WKPGLWNFLQMADEA 260 (268)
T ss_dssp HHHHTTCCCEEEEETTCCSSHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHCCCceEEEEcCCCCcCHhH-HHHHHHHHHHHHHhc
Confidence 3346899999999998642 234456678888765
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-20 Score=158.38 Aligned_cols=251 Identities=14% Similarity=0.074 Sum_probs=155.5
Q ss_pred cceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcc--h-------------------HHHHHHHHHcCc
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIP--M-------------------VNLAAALEREGI 75 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~--~-------------------~~~~~~l~~~G~ 75 (289)
+..+++.++..||.+|.+.++.|. +.|+||+.||++......+ + ...++.|+++||
T Consensus 39 ~~~~~v~i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy 118 (560)
T 3iii_A 39 IMEKDGTVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDY 118 (560)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTC
T ss_pred EEEEEEEEECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCC
Confidence 457789999999999999988664 5689999999998742100 0 013678999999
Q ss_pred cEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCC--ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 76 SAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGR--VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 76 ~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
.|+.+|+||+|.|.+...... ....+|+.++++++.++.. .+++++|+|+||.+++.+|+..|. ++++|..++..+
T Consensus 119 ~vv~~D~RG~G~S~G~~~~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d 197 (560)
T 3iii_A 119 VVVKVALRGSDKSKGVLSPWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLND 197 (560)
T ss_dssp EEEEEECTTSTTCCSCBCTTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCB
T ss_pred EEEEEcCCCCCCCCCccccCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCccc
Confidence 999999999999998765322 4678999999999987632 589999999999999999998887 999999999877
Q ss_pred ccccccc---cccchhHhhhhhcCcccccccccccccccChhhhhh-hhccchhh--hhcccccCceEEEEEeCCCCccC
Q 022960 153 LKRGIEG---RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMD-RLSTDIHA--ACHMICQDCRVLTIHGTKDKMVP 226 (289)
Q Consensus 153 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~P~l~i~g~~D~~~~ 226 (289)
....... .....+...+.......+........ . ...+.. ....++.. .....+|++|+|++.|-.|..+.
T Consensus 198 ~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~--~-~~~~~~hp~~d~~W~~~~~~~~~I~vPvl~v~Gw~D~~~~ 274 (560)
T 3iii_A 198 MYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIED--L-IQAQQEHPLFDDFWKQRQVPLSQIKTPLLTCASWSTQGLH 274 (560)
T ss_dssp HHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCC--H-HHHHHHCCSSCHHHHTTBCCGGGCCSCEEEEEEGGGTTTT
T ss_pred ccccceecCCCCchhHHHHHHhhhccccccccchHH--H-HHHHHHCCCcchHhhccCCchhhCCCCEEEeCCcCCCccc
Confidence 5431110 01111110000000000000000000 0 000000 00000000 01223579999999999997333
Q ss_pred hhhHHHHHhhCCC-cEEEEEcCCCcccccCchHHHHHHHHHHHhhcCCC
Q 022960 227 AEDALEFDKFIPN-HKLHIIEGADHEFTSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 227 ~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
.....+.++.+.. .+...+-+.+|+......+..+...+|++.+++..
T Consensus 275 ~~g~l~~y~~l~~~~k~l~ih~~~~~~~~~~~~~~~~~~~wfD~~LkG~ 323 (560)
T 3iii_A 275 NRGSFEGFKQAASEEKWLYVHGRKEWESYYARENLERQKSFFDFYLKEE 323 (560)
T ss_dssp HHHHHHHHHHCCCSSEEEEEESSCHHHHHHSHHHHHHHHHHHHHHTSCC
T ss_pred chhHHHHHHhccccCcEEEECCCCCcCcccChhHHHHHHHHHHHHhCCC
Confidence 3444444555543 34343433445432223467788999999999754
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-20 Score=146.37 Aligned_cols=217 Identities=13% Similarity=0.090 Sum_probs=131.4
Q ss_pred CCCCceEEEEEeecC-----CCcEEEEEcCCCCCCCCcchH---HHHHHHHHcCccEEEEccccCC--------------
Q 022960 29 NSHGEKLVGILHETG-----SKQLVIVCHGFQSTKDRIPMV---NLAAALEREGISAFRFDFSGNG-------------- 86 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~-----~~~~iv~~hG~~~~~~~~~~~---~~~~~l~~~G~~v~~~d~~G~G-------------- 86 (289)
...|..+.+.++.|. +.|+||++||++++... |. .+...+.+.|+.|+++|.+++|
T Consensus 30 ~~~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~~--~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g 107 (283)
T 4b6g_A 30 QTLQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQN--FITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQS 107 (283)
T ss_dssp TTTTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSHH--HHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTT
T ss_pred hhhCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCccc--hhhcccHHHHHhhCCeEEEEeccccccccccccccccccCC
Confidence 345777877766543 45899999999988754 42 2456667779999999976333
Q ss_pred CCCCCc-------cccc-hHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc
Q 022960 87 ESEGSF-------LYGN-YRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGI 157 (289)
Q Consensus 87 ~s~~~~-------~~~~-~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~ 157 (289)
.+.... .... ....++++..+++.... ..++++|+|||+||.+|+.++.++|+ ++++++++|..+.....
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~ 186 (283)
T 4b6g_A 108 AGFYLNATEQPWAANYQMYDYILNELPRLIEKHFP-TNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLVP 186 (283)
T ss_dssp BCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSC-EEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGSH
T ss_pred CcccccCccCcccchhhHHHHHHHHHHHHHHHhCC-CCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccCc
Confidence 221000 0011 22224455555554422 24689999999999999999999999 99999999976643211
Q ss_pred cccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhh-HHH----
Q 022960 158 EGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED-ALE---- 232 (289)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~---- 232 (289)
. ........... ...... ..+...........+|+++++|+.|.+++... ++.
T Consensus 187 ~---~~~~~~~~~g~----------------~~~~~~---~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~ 244 (283)
T 4b6g_A 187 W---GEKAFTAYLGK----------------DREKWQ---QYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIET 244 (283)
T ss_dssp H---HHHHHHHHHCS----------------CGGGGG---GGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHH
T ss_pred c---hhhhHHhhcCC----------------chHHHH---hcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHH
Confidence 0 00001111000 000000 00111111112235699999999999997621 333
Q ss_pred HHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHhhc
Q 022960 233 FDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 233 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
+.+.-.++++.+++|++|.+.. -......+.+|+.+.+
T Consensus 245 l~~~g~~~~~~~~~g~~H~~~~-~~~~l~~~l~~~~~~l 282 (283)
T 4b6g_A 245 CRAANQPVDVRFHKGYDHSYYF-IASFIGEHIAYHAAFL 282 (283)
T ss_dssp HHHHTCCCEEEEETTCCSSHHH-HHHHHHHHHHHHHTTC
T ss_pred HHHcCCCceEEEeCCCCcCHhH-HHHHHHHHHHHHHHhc
Confidence 4444456899999999998631 2345667778887765
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-21 Score=157.38 Aligned_cols=138 Identities=17% Similarity=0.178 Sum_probs=87.4
Q ss_pred CcccceeeEEeeCCC--C--ceEEEEEeec------CCCcEEEEEcCCCCCCCC---------cchHHHHHHHHHcCccE
Q 022960 17 DPVVQRRRVVIPNSH--G--EKLVGILHET------GSKQLVIVCHGFQSTKDR---------IPMVNLAAALEREGISA 77 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~--g--~~l~~~~~~~------~~~~~iv~~hG~~~~~~~---------~~~~~~~~~l~~~G~~v 77 (289)
...+...++.+.+.+ | ..+.++++.| ++.|+||++||++++... ..+..++..|.++||.|
T Consensus 41 ~~~v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V 120 (397)
T 3h2g_A 41 KCNVRVAEFTYATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVV 120 (397)
T ss_dssp CSEEEEEEEEEEEECTTSCEEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEE
T ss_pred cCCeEEEEEEEEecCCCCCeEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEE
Confidence 445556666665543 4 3466665543 245789999999987642 12567888899999999
Q ss_pred EEEccccCCCCCCCcc-ccchHH---HHHHHHHHHHHHHh-cCC---ceEEEEEeChhHHHHHHHHH-hCC----C--cc
Q 022960 78 FRFDFSGNGESEGSFL-YGNYRR---EAEDLRAIVQDFCA-KGR---VITAIIGHSKGGNAVLLYAS-KYN----D--IS 142 (289)
Q Consensus 78 ~~~d~~G~G~s~~~~~-~~~~~~---~~~d~~~~i~~l~~-~~~---~~~~l~G~S~Gg~~a~~~a~-~~p----~--v~ 142 (289)
+++|+||||.|..... ...... .+.|....+..+.+ .+. ++++++|||+||.+++.++. ..+ . +.
T Consensus 121 ~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~ 200 (397)
T 3h2g_A 121 VGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLV 200 (397)
T ss_dssp EEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEE
T ss_pred EEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceE
Confidence 9999999999864322 211111 11222222222221 144 69999999999999988762 222 2 67
Q ss_pred EEEEeccCCccc
Q 022960 143 IVINISGRFNLK 154 (289)
Q Consensus 143 ~~v~~~~~~~~~ 154 (289)
+++..+++.+..
T Consensus 201 ~~~~~~~~~~l~ 212 (397)
T 3h2g_A 201 ASAPISGPYALE 212 (397)
T ss_dssp EEEEESCCSSHH
T ss_pred EEecccccccHH
Confidence 777777766553
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-22 Score=164.88 Aligned_cols=137 Identities=15% Similarity=0.055 Sum_probs=106.5
Q ss_pred CcccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCc------------chH----HHHHHHHHcCcc
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRI------------PMV----NLAAALEREGIS 76 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~------------~~~----~~~~~l~~~G~~ 76 (289)
..++..+.+.+.+.+|..+.++++.|. +.|+||++||.+++.... .|. .+++.|+++||.
T Consensus 82 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~ 161 (391)
T 3g8y_A 82 KEGYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYV 161 (391)
T ss_dssp ETTEEEEEEEECCSTTCCEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCE
T ss_pred cCCEEEEEEEEEcCCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCE
Confidence 346778889999999999999887553 468999999998865310 012 688999999999
Q ss_pred EEEEccccCCCCCCCccc-----cchHHH---------------HHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHH
Q 022960 77 AFRFDFSGNGESEGSFLY-----GNYRRE---------------AEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLL 133 (289)
Q Consensus 77 v~~~d~~G~G~s~~~~~~-----~~~~~~---------------~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~ 133 (289)
|+++|+||+|.+...... ..+... +.|+.++++++... +.++++++||||||.+++.
T Consensus 162 Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~ 241 (391)
T 3g8y_A 162 AVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMV 241 (391)
T ss_dssp EEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHH
Confidence 999999999999865321 122222 37889999999876 3468999999999999999
Q ss_pred HHHhCCCccEEEEeccCCcc
Q 022960 134 YASKYNDISIVINISGRFNL 153 (289)
Q Consensus 134 ~a~~~p~v~~~v~~~~~~~~ 153 (289)
++...++++++|+.++....
T Consensus 242 ~a~~~~~i~a~v~~~~~~~~ 261 (391)
T 3g8y_A 242 LGVLDKDIYAFVYNDFLCQT 261 (391)
T ss_dssp HHHHCTTCCEEEEESCBCCH
T ss_pred HHHcCCceeEEEEccCCCCc
Confidence 99888889999988765443
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-20 Score=158.15 Aligned_cols=137 Identities=18% Similarity=0.224 Sum_probs=107.3
Q ss_pred CcccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCC-----CCcchHH-HH---HHHHHcCccEEEEcccc
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTK-----DRIPMVN-LA---AALEREGISAFRFDFSG 84 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~-----~~~~~~~-~~---~~l~~~G~~v~~~d~~G 84 (289)
...+..+++.++..||.+|+++++.|. +.|+||++||++... ....|.. +. +.|+++||.|+.+|+||
T Consensus 20 ~~~~~~~~v~i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG 99 (615)
T 1mpx_A 20 SNDYIKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRG 99 (615)
T ss_dssp TCSEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTT
T ss_pred cCCCEEEEEEEECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCC
Confidence 445667889999999999999887654 457889999988742 1112332 33 78999999999999999
Q ss_pred CCCCCCCccccc-----hH----HHHHHHHHHHHHHHhc-CC--ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 85 NGESEGSFLYGN-----YR----REAEDLRAIVQDFCAK-GR--VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 85 ~G~s~~~~~~~~-----~~----~~~~d~~~~i~~l~~~-~~--~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
+|.|.+...... +. ..++|+.++++++.++ .. .+++++|+|+||++++.+|...++ ++++|.+++..
T Consensus 100 ~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~ 179 (615)
T 1mpx_A 100 KYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMI 179 (615)
T ss_dssp STTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCC
T ss_pred CCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCcc
Confidence 999987653321 12 5689999999999776 32 389999999999999999888777 99999999987
Q ss_pred cc
Q 022960 152 NL 153 (289)
Q Consensus 152 ~~ 153 (289)
+.
T Consensus 180 d~ 181 (615)
T 1mpx_A 180 DG 181 (615)
T ss_dssp CT
T ss_pred cc
Confidence 74
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-19 Score=145.17 Aligned_cols=256 Identities=14% Similarity=0.070 Sum_probs=146.9
Q ss_pred CcccceeeEEeeCCC--C--ceEEEEEeecC----CCcEEEEEcCCCCCCCCc------chHHHHHHHH-HcCccEEEEc
Q 022960 17 DPVVQRRRVVIPNSH--G--EKLVGILHETG----SKQLVIVCHGFQSTKDRI------PMVNLAAALE-REGISAFRFD 81 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~--g--~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~------~~~~~~~~l~-~~G~~v~~~d 81 (289)
...+...++.+.+.| | ..+.++++.|. +.|+|++.||........ ....++..|+ ++||.|+++|
T Consensus 38 ~~~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D 117 (377)
T 4ezi_A 38 HYDLQLYKINYKTQSPDGNLTIASGLVAMPIHPVGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPD 117 (377)
T ss_dssp CCCEEEEEEEEEEECTTSCEEEEEEEEEEESSCSSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEEC
T ss_pred CCCcEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeC
Confidence 345566667776654 4 34666666543 458999999998532210 0123556677 8899999999
Q ss_pred cccCCCCCCCc-cccchHHHHHH----HHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHHhC----CC--ccEEEEe
Q 022960 82 FSGNGESEGSF-LYGNYRREAED----LRAIVQDFCAKGR---VITAIIGHSKGGNAVLLYASKY----ND--ISIVINI 147 (289)
Q Consensus 82 ~~G~G~s~~~~-~~~~~~~~~~d----~~~~i~~l~~~~~---~~~~l~G~S~Gg~~a~~~a~~~----p~--v~~~v~~ 147 (289)
+||+|.|.+.. ..........+ +.++...+...+. .+++++|||+||.+++.+|... |+ +.+++..
T Consensus 118 ~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~ 197 (377)
T 4ezi_A 118 YLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPG 197 (377)
T ss_dssp CTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEE
T ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEec
Confidence 99999998622 22221222223 2222222222233 6899999999999999988764 44 8899999
Q ss_pred ccCCcccccccccccc---------hhHhhhh---hcCcccc---cccc----------c------------ccccccCh
Q 022960 148 SGRFNLKRGIEGRLGL---------GYLQRIK---QNGFIDV---RNKK----------G------------KLEYRVTQ 190 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~---~~~~----------~------------~~~~~~~~ 190 (289)
++++++.......... .+..... ...+... .... . .....+..
T Consensus 198 ~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (377)
T 4ezi_A 198 SAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQ 277 (377)
T ss_dssp SCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBC
T ss_pred CcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhc
Confidence 9887754322111100 0000000 0000000 0000 0 00000000
Q ss_pred hhhhhhhc---cc-hhh-----hhcccccCceEEEEEeCCCCccChhhHHHHHhhCC--C-cEEEEEcC--CCcccccCc
Q 022960 191 ESLMDRLS---TD-IHA-----ACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP--N-HKLHIIEG--ADHEFTSHQ 256 (289)
Q Consensus 191 ~~~~~~~~---~~-~~~-----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~-~~~~~~~~--~gH~~~~~~ 256 (289)
..+.+.+. .. ... ......+++|+|+++|++|.++|++.++.+.+.+. + ++++.+++ .+|... .
T Consensus 278 ~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~v~~~~~~~~~~~H~~~--~ 355 (377)
T 4ezi_A 278 PKFSNGIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSDFVWIKSVSDALDHVQA--H 355 (377)
T ss_dssp HHHHHHHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCSCEEEEESCSSCCTTTT--H
T ss_pred hhhhhhcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEcCCCCCCccCh--H
Confidence 11110000 00 000 01122568999999999999999999888877652 2 79999999 888742 3
Q ss_pred hHHHHHHHHHHHhhcCCC
Q 022960 257 DELASLVIQFIKANYQKD 274 (289)
Q Consensus 257 ~~~~~~i~~fl~~~~~~~ 274 (289)
......+.+||++...+.
T Consensus 356 ~~~~~~~~~wl~~~~~~~ 373 (377)
T 4ezi_A 356 PFVLKEQVDFFKQFERQE 373 (377)
T ss_dssp HHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHhhcch
Confidence 467788999999987653
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-21 Score=148.80 Aligned_cols=105 Identities=16% Similarity=0.238 Sum_probs=77.3
Q ss_pred CCcEEEEEcCCCCCC---CCcchHHHHHHHHHc--CccEEEEccccCCCCCCCcc--ccchHHHHHHHHHHHHHHHhcCC
Q 022960 44 SKQLVIVCHGFQSTK---DRIPMVNLAAALERE--GISAFRFDFSGNGESEGSFL--YGNYRREAEDLRAIVQDFCAKGR 116 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~---~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~~~ 116 (289)
..++||++||++++. .. |..+.+.|.+. |+.|+++|+ |||.|..... ..++.+.++++.+.++.+....
T Consensus 4 ~~~pvVllHG~~~~~~~~~~--~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~- 79 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCNPLS--MGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQ- 79 (279)
T ss_dssp SSCCEEEECCTTCCSCCTTT--THHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGT-
T ss_pred CCCcEEEECCCCCCCCCccc--HHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhcc-
Confidence 456799999999877 44 89999999886 789999998 9998753211 1233444444444443211111
Q ss_pred ceEEEEEeChhHHHHHHHHHhCCC--ccEEEEeccCCc
Q 022960 117 VITAIIGHSKGGNAVLLYASKYND--ISIVINISGRFN 152 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~ 152 (289)
+++.++||||||.++..++.++|+ |+++|+++++..
T Consensus 80 ~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~~ 117 (279)
T 1ei9_A 80 QGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp TCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred CCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCccC
Confidence 689999999999999999999986 999999987543
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5e-20 Score=145.91 Aligned_cols=213 Identities=12% Similarity=0.157 Sum_probs=136.3
Q ss_pred ecCCCc-----EEEEEcC--CCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCC---CccccchHHHHHHHHHHHHH
Q 022960 41 ETGSKQ-----LVIVCHG--FQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEG---SFLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 41 ~~~~~~-----~iv~~hG--~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~---~~~~~~~~~~~~d~~~~i~~ 110 (289)
..+++| +++++|| ++++. +.|..+++.|.. ++.|+++|+||+|.+.. .....+++.+++++.+.++.
T Consensus 80 ~~g~~~~~~~~~l~~~hg~g~~~~~--~~~~~l~~~L~~-~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~ 156 (319)
T 2hfk_A 80 GGPTDRAEGRAVLVGCTGTAANGGP--HEFLRLSTSFQE-ERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILR 156 (319)
T ss_dssp CCCCC-CCSCCEEEEECCCCTTCST--TTTHHHHHTTTT-TCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHH
T ss_pred CCCCCCccccccEEEeCCCCCCCcH--HHHHHHHHhcCC-CCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHH
Confidence 344566 9999998 45555 458899998874 69999999999999721 22345778888888888876
Q ss_pred HHhcCCceEEEEEeChhHHHHHHHHHhC----CC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccc
Q 022960 111 FCAKGRVITAIIGHSKGGNAVLLYASKY----ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLE 185 (289)
Q Consensus 111 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (289)
+. ...+++|+|||+||.+|..+|.+. ++ |++++++++......... ..+...+....+....
T Consensus 157 ~~--~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~----~~~~~~l~~~~~~~~~------- 223 (319)
T 2hfk_A 157 AA--GDAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPI----EVWSRQLGEGLFAGEL------- 223 (319)
T ss_dssp HH--TTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHH----HHTHHHHHHHHHHTCS-------
T ss_pred hc--CCCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHH----HHHHHHhhHHHHHhhc-------
Confidence 53 345799999999999999999876 44 999999987643221100 0111111000000000
Q ss_pred cccChhhhh--hhhccchhhhhcccccCceEEEEEeCCCCccChhh-HHHHHhhCC-CcEEEEEcCCCccc-c-cCchHH
Q 022960 186 YRVTQESLM--DRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED-ALEFDKFIP-NHKLHIIEGADHEF-T-SHQDEL 259 (289)
Q Consensus 186 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~-~~~~~~~~~~gH~~-~-~~~~~~ 259 (289)
.......+. ..+.. .........+++|+++++| +|..++.+. ...+.+..+ +.+++.++ ++|+. + ++++++
T Consensus 224 ~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~H~~~~~e~~~~~ 300 (319)
T 2hfk_A 224 EPMSDARLLAMGRYAR-FLAGPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVP-GDHFTMMRDHAPAV 300 (319)
T ss_dssp SCCCHHHHHHHHHHHH-HHHSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEES-SCTTHHHHTCHHHH
T ss_pred cccchHHHHHHHHHHH-HHHhCCCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeC-CCcHHHHHHhHHHH
Confidence 000000000 00000 0001112356899999999 999888776 556666655 57999999 58984 4 567889
Q ss_pred HHHHHHHHHhhcC
Q 022960 260 ASLVIQFIKANYQ 272 (289)
Q Consensus 260 ~~~i~~fl~~~~~ 272 (289)
.+.|.+||++...
T Consensus 301 ~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 301 AEAVLSWLDAIEG 313 (319)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999987654
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.9e-21 Score=155.09 Aligned_cols=135 Identities=10% Similarity=-0.008 Sum_probs=104.3
Q ss_pred CcccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCC------------cchH----HHHHHHHHcCcc
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDR------------IPMV----NLAAALEREGIS 76 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~------------~~~~----~~~~~l~~~G~~ 76 (289)
..++..+.+.+.+.+|.++.++++.|. +.|+||++||.+++... ..|. .+++.|+++||.
T Consensus 87 ~~g~~~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~ 166 (398)
T 3nuz_A 87 REGYRLEKWEFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYI 166 (398)
T ss_dssp CSSEEEEEEEECCSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCE
T ss_pred cCCEEEEEEEEEcCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCE
Confidence 445678889999999999999887543 45899999999886431 0112 588999999999
Q ss_pred EEEEccccCCCCCCCccc--------------------cchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHH
Q 022960 77 AFRFDFSGNGESEGSFLY--------------------GNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLL 133 (289)
Q Consensus 77 v~~~d~~G~G~s~~~~~~--------------------~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~ 133 (289)
|+++|+||+|.+...... ......+.|+.++++++..+ +.++++++||||||.+++.
T Consensus 167 Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~ 246 (398)
T 3nuz_A 167 AVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMV 246 (398)
T ss_dssp EEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHH
Confidence 999999999999754310 11122347889999999766 3468999999999999999
Q ss_pred HHHhCCCccEEEEeccCC
Q 022960 134 YASKYNDISIVINISGRF 151 (289)
Q Consensus 134 ~a~~~p~v~~~v~~~~~~ 151 (289)
+++..+.++++|.+++..
T Consensus 247 ~aa~~~~i~a~v~~~~~~ 264 (398)
T 3nuz_A 247 LGTLDTSIYAFVYNDFLC 264 (398)
T ss_dssp HHHHCTTCCEEEEESCBC
T ss_pred HHhcCCcEEEEEEecccc
Confidence 998888899999876543
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.7e-20 Score=157.43 Aligned_cols=132 Identities=14% Similarity=0.089 Sum_probs=106.0
Q ss_pred ceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCc-chHHHH-HHHHHcCccEEEEccccCCCCCCCcccc
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRI-PMVNLA-AALEREGISAFRFDFSGNGESEGSFLYG 95 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~-~~~~~~-~~l~~~G~~v~~~d~~G~G~s~~~~~~~ 95 (289)
..+++.+++.||.+|.+.++.|. +.|+||++||++...... .|...+ +.|+++||.|+.+|+||+|.|.+....
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~- 86 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP- 86 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT-
T ss_pred EEEEEEEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc-
Confidence 35678999999999999877653 458899999988775310 011133 789999999999999999999987643
Q ss_pred chHHHHHHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccC-Cccc
Q 022960 96 NYRREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYND-ISIVINISGR-FNLK 154 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~-~~~~ 154 (289)
+....+|+.++++++.++. ..+++++|+||||.+++.+|...|. ++++|++++. .+..
T Consensus 87 -~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~ 148 (587)
T 3i2k_A 87 -HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYR 148 (587)
T ss_dssp -TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCC
T ss_pred -ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccc
Confidence 3457899999999997662 3589999999999999999998877 9999999987 6554
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.8e-21 Score=150.45 Aligned_cols=219 Identities=10% Similarity=0.061 Sum_probs=137.4
Q ss_pred ecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEE
Q 022960 41 ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITA 120 (289)
Q Consensus 41 ~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 120 (289)
..+.+++|+++||++++. +.|..+++.|.. ++.|+++|+||+|.+.. ...+++.+++++.+.+..+. ...+++
T Consensus 97 ~~g~~~~l~~lhg~~~~~--~~~~~l~~~L~~-~~~v~~~d~~g~~~~~~--~~~~~~~~a~~~~~~i~~~~--~~~~~~ 169 (329)
T 3tej_A 97 REGNGPTLFCFHPASGFA--WQFSVLSRYLDP-QWSIIGIQSPRPNGPMQ--TAANLDEVCEAHLATLLEQQ--PHGPYY 169 (329)
T ss_dssp ECCSSCEEEEECCTTSCC--GGGGGGGGTSCT-TCEEEEECCCTTTSHHH--HCSSHHHHHHHHHHHHHHHC--SSSCEE
T ss_pred cCCCCCcEEEEeCCcccc--hHHHHHHHhcCC-CCeEEEeeCCCCCCCCC--CCCCHHHHHHHHHHHHHHhC--CCCCEE
Confidence 356789999999999988 458889988854 69999999999987653 23466777777777766552 345899
Q ss_pred EEEeChhHHHHHHHHHh---CCC-ccEEEEeccCCcccccccc----cccchhHhhhhhcCcccccccccccccccChhh
Q 022960 121 IIGHSKGGNAVLLYASK---YND-ISIVINISGRFNLKRGIEG----RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQES 192 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~---~p~-v~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (289)
|+||||||.+|..+|.+ .|+ |.+++++++.......... .........+.................. ....
T Consensus 170 l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 248 (329)
T 3tej_A 170 LLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTE-LFTT 248 (329)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSCCH-HHHH
T ss_pred EEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhccccccHH-HHHH
Confidence 99999999999999998 888 9999999876543211100 0111111111100000000000000000 0001
Q ss_pred hhhhhccc--hhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCc--hHHHHHHHHHH
Q 022960 193 LMDRLSTD--IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQ--DELASLVIQFI 267 (289)
Q Consensus 193 ~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~--~~~~~~i~~fl 267 (289)
+...+... .........+.+|++++.|++|...+.+....+.+..++.+++.++ ++|+.+ +++ +.+.+.|.+||
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~~~~~~~v~-g~H~~~~~~~~~~~ia~~l~~~L 327 (329)
T 3tej_A 249 IEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQD-CAHVDIISPGTFEKIGPIIRATL 327 (329)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEEEEEEEEES-SCGGGGGSTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhcCCcEEEEec-CChHHhCCChHHHHHHHHHHHHh
Confidence 11111100 0111112245899999999999887777667777777788999998 688854 444 56777777776
Q ss_pred H
Q 022960 268 K 268 (289)
Q Consensus 268 ~ 268 (289)
.
T Consensus 328 ~ 328 (329)
T 3tej_A 328 N 328 (329)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-19 Score=152.63 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=105.4
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCC------CCcchHHH---H-HHHHHcCccEEEEccccC
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTK------DRIPMVNL---A-AALEREGISAFRFDFSGN 85 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~------~~~~~~~~---~-~~l~~~G~~v~~~d~~G~ 85 (289)
.+..+++.+++.||.+|.++++.|. +.|+||++||++... ....|... . +.|+++||.|+.+|+||+
T Consensus 34 ~~~~~~v~i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~ 113 (652)
T 2b9v_A 34 DYIKREVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGK 113 (652)
T ss_dssp SEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTS
T ss_pred CcEEEEEEEECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcC
Confidence 3556788999999999999877654 457889999887541 00112222 2 788999999999999999
Q ss_pred CCCCCCccccc-----hH----HHHHHHHHHHHHHHhc-CC--ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 86 GESEGSFLYGN-----YR----REAEDLRAIVQDFCAK-GR--VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 86 G~s~~~~~~~~-----~~----~~~~d~~~~i~~l~~~-~~--~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
|.|.+...... +. ...+|+.++++++.++ .. .++.++|+|+||++++.++...++ ++++|.+++..+
T Consensus 114 g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d 193 (652)
T 2b9v_A 114 YGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 193 (652)
T ss_dssp TTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred CCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEecccccc
Confidence 99987653321 22 5689999999999876 32 489999999999999999887777 999999998877
Q ss_pred cc
Q 022960 153 LK 154 (289)
Q Consensus 153 ~~ 154 (289)
..
T Consensus 194 ~~ 195 (652)
T 2b9v_A 194 GW 195 (652)
T ss_dssp TT
T ss_pred cc
Confidence 53
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-19 Score=137.94 Aligned_cols=201 Identities=10% Similarity=0.045 Sum_probs=125.9
Q ss_pred CCCcEEEEEcCCCCCCCCcchH-HHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMV-NLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITA 120 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~ 120 (289)
+.+++|||+||++++.. ..|. .+.+.|.++||.|+.+|+||||.++ .....+++.+.++.+.+. +.++++
T Consensus 63 ~~~~pVVLvHG~~~~~~-~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~-------~~~~~~~la~~I~~l~~~~g~~~v~ 134 (316)
T 3icv_A 63 SVSKPILLVPGTGTTGP-QSFDSNWIPLSAQLGYTPCWISPPPFMLND-------TQVNTEYMVNAITTLYAGSGNNKLP 134 (316)
T ss_dssp BCSSEEEEECCTTCCHH-HHHTTTHHHHHHHTTCEEEEECCTTTTCSC-------HHHHHHHHHHHHHHHHHHTTSCCEE
T ss_pred CCCCeEEEECCCCCCcH-HHHHHHHHHHHHHCCCeEEEecCCCCCCCc-------HHHHHHHHHHHHHHHHHHhCCCceE
Confidence 46789999999998862 1376 8999999999999999999998753 233355666666665444 668999
Q ss_pred EEEeChhHHHHHHHHHhC---CC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhh
Q 022960 121 IIGHSKGGNAVLLYASKY---ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDR 196 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (289)
|+||||||.++..++..+ ++ |+++|+++++..-..... ... .+ .. .. ..-...... ..+.+.
T Consensus 135 LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~Gt~~a~-l~~-----~~---~~---~~-~a~~q~~~g-S~fl~~ 200 (316)
T 3icv_A 135 VLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAG-PLD-----AL---AV---SA-PSVWQQTTG-SALTTA 200 (316)
T ss_dssp EEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBSCC---------------CC---CC-HHHHHTBTT-CHHHHH
T ss_pred EEEECHHHHHHHHHHHhccccchhhceEEEECCCCCCchhhh-hhh-----hc---cc---cC-hhHHhhCCC-CHHHHH
Confidence 999999999998777765 45 999999998765332110 000 00 00 00 000000000 111111
Q ss_pred hccchhhhhcccccCceEEEEEeCCCCccChhh--HHHHHhhCCCcEEEEEc-------CCCcccccCchHHHHHHHHHH
Q 022960 197 LSTDIHAACHMICQDCRVLTIHGTKDKMVPAED--ALEFDKFIPNHKLHIIE-------GADHEFTSHQDELASLVIQFI 267 (289)
Q Consensus 197 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~-------~~gH~~~~~~~~~~~~i~~fl 267 (289)
+.... .....+|+..|++..|.+|.+.. ...-...+++.+-+.+. ..+|.-+.....+...+.+.|
T Consensus 201 Ln~~~-----~~~~~v~~tsI~S~~D~iV~P~~~~g~~as~~L~g~~Ni~vqd~Cp~~~~~~H~~~~~dp~v~~~V~~aL 275 (316)
T 3icv_A 201 LRNAG-----GLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNGKNVQAQAVCGPLFVIDHAGSLTSQFSYVVGRSAL 275 (316)
T ss_dssp HHHTT-----TTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBTSEEEEHHHHHCTTCCCCTTHHHHBHHHHHHHHHHH
T ss_pred HhhcC-----CCCCCCcEEEEEcCCCCCccCCcccCcccceecCCCceEEEeccCCCCCccCCcCccCCHHHHHHHHHHh
Confidence 11100 01126899999999999996655 11111234455656652 578986655677888888888
Q ss_pred Hhh
Q 022960 268 KAN 270 (289)
Q Consensus 268 ~~~ 270 (289)
+.-
T Consensus 276 ~~~ 278 (316)
T 3icv_A 276 RST 278 (316)
T ss_dssp HCT
T ss_pred ccC
Confidence 765
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-20 Score=149.86 Aligned_cols=168 Identities=14% Similarity=0.222 Sum_probs=117.5
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCc---cEEEEccccCCCC-----CCCc----------------------
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGI---SAFRFDFSGNGES-----EGSF---------------------- 92 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~---~v~~~d~~G~G~s-----~~~~---------------------- 92 (289)
+++++|||+||++++... |..+++.|.++|| +|+++|++|||.| +...
T Consensus 20 ~~~ppVVLlHG~g~s~~~--w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~ 97 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAGQ--FESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDK 97 (484)
T ss_dssp -CCCCEEEECCTTCCGGG--GHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHH
T ss_pred CCCCEEEEECCCCCCHHH--HHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccccc
Confidence 467899999999999854 8999999999999 8999999999976 1000
Q ss_pred -----cccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCC----CccEEEEeccCCccccccccccc
Q 022960 93 -----LYGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYN----DISIVINISGRFNLKRGIEGRLG 162 (289)
Q Consensus 93 -----~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p----~v~~~v~~~~~~~~~~~~~~~~~ 162 (289)
.........+++.+.++.+.+. +.++++++||||||.+++.++.++| .|+++|+++++....
T Consensus 98 v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~~d-------- 169 (484)
T 2zyr_A 98 ILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWGVD-------- 169 (484)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCSEE--------
T ss_pred cccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccccc--------
Confidence 0012233345555555554443 7789999999999999999999986 499999999876411
Q ss_pred chhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCc--cChhhHHHHHhhCC-C
Q 022960 163 LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKM--VPAEDALEFDKFIP-N 239 (289)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~--~~~~~~~~~~~~~~-~ 239 (289)
.....+++.+.|+.|.. +.... ..++ +
T Consensus 170 ---------------------------------------------~p~g~~~L~ilG~~d~~p~V~~ps-----s~L~~g 199 (484)
T 2zyr_A 170 ---------------------------------------------APEGIPTLAVFGNPKALPALGLPE-----EKVVYN 199 (484)
T ss_dssp ---------------------------------------------CCTTSCEEEEEECGGGSCCSSCCS-----SCCEET
T ss_pred ---------------------------------------------cCcCCHHHHHhCCCCcCCcccChh-----HhcCCC
Confidence 00023445555544321 00000 1355 7
Q ss_pred cEEEEEcCCCcccccCchHHHHHHHHHHHhh
Q 022960 240 HKLHIIEGADHEFTSHQDELASLVIQFIKAN 270 (289)
Q Consensus 240 ~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 270 (289)
.+.+++++++|..+.+..++.+.+.+||...
T Consensus 200 a~~v~i~~a~H~~ll~dp~v~~~Vl~fL~~~ 230 (484)
T 2zyr_A 200 ATNVYFNNMTHVQLCTSPETFAVMFEFINGY 230 (484)
T ss_dssp SEEEEETTCCHHHHHHCHHHHHHHHHHHHSS
T ss_pred ceEEEECCCCccccccCHHHHHHHHHHhccc
Confidence 7888999999997655667777899999854
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=136.99 Aligned_cols=196 Identities=11% Similarity=0.074 Sum_probs=123.3
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
++.+++||++||++++.. .|..+.+.|.. ++.|+++|+||++ ..++++.+.++.+. ...++++
T Consensus 19 ~~~~~~l~~~hg~~~~~~--~~~~~~~~l~~-~~~v~~~d~~g~~------------~~~~~~~~~i~~~~--~~~~~~l 81 (244)
T 2cb9_A 19 QQGGKNLFCFPPISGFGI--YFKDLALQLNH-KAAVYGFHFIEED------------SRIEQYVSRITEIQ--PEGPYVL 81 (244)
T ss_dssp CCCSSEEEEECCTTCCGG--GGHHHHHHTTT-TSEEEEECCCCST------------THHHHHHHHHHHHC--SSSCEEE
T ss_pred CCCCCCEEEECCCCCCHH--HHHHHHHHhCC-CceEEEEcCCCHH------------HHHHHHHHHHHHhC--CCCCEEE
Confidence 456789999999999884 48999998874 6999999999873 23566666666652 2457999
Q ss_pred EEeChhHHHHHHHHHhC---CC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhh
Q 022960 122 IGHSKGGNAVLLYASKY---ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL 197 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (289)
+||||||.+|+.+|.+. ++ +.++|++++..... .+.......... .... ......+...+
T Consensus 82 ~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~-~~~~~~~~~~~~--------~~~~-------~~~~~~~~~~~ 145 (244)
T 2cb9_A 82 LGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQ-SITADTENDDSA--------AYLP-------EAVRETVMQKK 145 (244)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCS-CCCCC---------------CCSC-------HHHHHHHTHHH
T ss_pred EEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcc-cccccccHHHHH--------HHhH-------HHHHHHHHHHH
Confidence 99999999999999876 45 99999998764311 000000000000 0000 00000000000
Q ss_pred c--cchhh-hhcccccCceEEEEEeC--CCCccChhhHHHHHhhCC-CcEEEEEcCCCc--ccc-cCchHHHHHHHHHHH
Q 022960 198 S--TDIHA-ACHMICQDCRVLTIHGT--KDKMVPAEDALEFDKFIP-NHKLHIIEGADH--EFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 198 ~--~~~~~-~~~~~~~~~P~l~i~g~--~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH--~~~-~~~~~~~~~i~~fl~ 268 (289)
. ..+.. .....++++|+++++|+ +|.+ +++....+.+..+ +.++..+++ || ++. +.++.+.+.|.+||.
T Consensus 146 ~~~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i~~~L~ 223 (244)
T 2cb9_A 146 RCYQEYWAQLINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANIILNILD 223 (244)
T ss_dssp HHHHHHHHHCCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCcCCCEEEEEccCccccc-cccchhHHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHHHHHHh
Confidence 0 00000 01123568999999999 8874 4454555666654 689999996 99 444 345789999999998
Q ss_pred hhcC
Q 022960 269 ANYQ 272 (289)
Q Consensus 269 ~~~~ 272 (289)
+...
T Consensus 224 ~~~~ 227 (244)
T 2cb9_A 224 KINS 227 (244)
T ss_dssp TC--
T ss_pred cCcc
Confidence 6554
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.3e-20 Score=151.21 Aligned_cols=160 Identities=15% Similarity=0.219 Sum_probs=116.2
Q ss_pred CCcEEEEEcCCCCCCCCcchHH-HHHHHHH-cCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-C--Cce
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVN-LAAALER-EGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-G--RVI 118 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~-~~~~l~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~--~~~ 118 (289)
++|+||++||++++... .|.. +.+.|.+ .||+|+++|+||+|.|.......++...++|+.++++++.+. + .++
T Consensus 69 ~~~~vvllHG~~~s~~~-~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~~ 147 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGEN-SWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPEN 147 (432)
T ss_dssp TSEEEEEECCTTCCTTS-HHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCeEEEECCCCCCCCc-hHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 57899999999998832 2665 8888886 689999999999999874333445567789999999999643 3 679
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhh
Q 022960 119 TAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL 197 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (289)
++|+||||||.+|+.++.++|+ ++++++++|.......... . ..+
T Consensus 148 i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~~~--------------~--------------------~~l 193 (432)
T 1gpl_A 148 VHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDTPE--------------E--------------------VRL 193 (432)
T ss_dssp EEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTCCT--------------T--------------------TSC
T ss_pred EEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCCCh--------------h--------------------hcc
Confidence 9999999999999999999998 9999999875432111000 0 000
Q ss_pred ccchhhhhcccccCceEEEEEeCCCCccCh-hhHHHHHhhCCCcEEEEEcCCCcc
Q 022960 198 STDIHAACHMICQDCRVLTIHGTKDKMVPA-EDALEFDKFIPNHKLHIIEGADHE 251 (289)
Q Consensus 198 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~ 251 (289)
.. ....++.+||+..|.++|. ... +.+ +-..+..+|++||.
T Consensus 194 ~~---------~da~~V~vIHt~~d~lVP~~~~g--~~~--~lg~~dfypngg~~ 235 (432)
T 1gpl_A 194 DP---------SDAKFVDVIHTDISPILPSLGFG--MSQ--KVGHMDFFPNGGKD 235 (432)
T ss_dssp CG---------GGSSEEEEECSCCSCHHHHCCCB--CSS--CCSSEEEEEGGGSS
T ss_pred Cc---------CCCceEEEEEcCCcccccccccc--ccc--cccceEEccCCCCC
Confidence 00 1145899999999999987 111 111 22566778888996
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.81 E-value=6.4e-18 Score=132.85 Aligned_cols=239 Identities=10% Similarity=0.061 Sum_probs=134.2
Q ss_pred ceeeEEeeCC-CCceEEEEEeec--CCCcEEEEEcCC--CCCCCCcchHH---HHHHHHHcCccEEEEccccCC-CCCCC
Q 022960 21 QRRRVVIPNS-HGEKLVGILHET--GSKQLVIVCHGF--QSTKDRIPMVN---LAAALEREGISAFRFDFSGNG-ESEGS 91 (289)
Q Consensus 21 ~~~~~~~~~~-~g~~l~~~~~~~--~~~~~iv~~hG~--~~~~~~~~~~~---~~~~l~~~G~~v~~~d~~G~G-~s~~~ 91 (289)
..+.+++.+. .+.++.++ +.| ++.|+||++||+ +++... |.. +.+.+.+.|+.|+++|.++.. .++..
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~~~~~p~vvllHG~~~~~~~~~--w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~ 84 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSGGANSPALYLLDGLRAQDDFSG--WDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWY 84 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECCSTTBCEEEEECCTTCCSSSCH--HHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCS
T ss_pred eEEEEEEECccCCCceEEE-ECCCCCCCCEEEEeCCCCCCCCcch--hhcCCCHHHHHhcCCeEEEEECCCCCccccccC
Confidence 3445566554 45677766 344 357899999999 445543 544 345667779999999987642 11111
Q ss_pred c--------cccchHHH-HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccc
Q 022960 92 F--------LYGNYRRE-AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRL 161 (289)
Q Consensus 92 ~--------~~~~~~~~-~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~ 161 (289)
. ....+.+. ++++..+++.....+.++++|+|+||||.+|+.++.++|+ +++++++++.+........
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~-- 162 (304)
T 1sfr_A 85 QPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGP-- 162 (304)
T ss_dssp SCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTHH--
T ss_pred CccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccchh--
Confidence 1 12344443 3566666664222233489999999999999999999999 9999999997654321100
Q ss_pred cchhHhh-hhhcCcccccccccccccccChhhhhhhhccchhhhhccc-ccCceEEEEEeCCCC--------------cc
Q 022960 162 GLGYLQR-IKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMI-CQDCRVLTIHGTKDK--------------MV 225 (289)
Q Consensus 162 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~l~i~g~~D~--------------~~ 225 (289)
..... .............+.. .... ....+........ ...+|+++++|+.|. .+
T Consensus 163 --~~~~~~~~~~~~~~~~~~~g~~----~~~~---~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~ 233 (304)
T 1sfr_A 163 --TLIGLAMGDAGGYKASDMWGPK----EDPA---WQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGF 233 (304)
T ss_dssp --HHHHHHHHHTTSCCHHHHHCST----TSTH---HHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHH
T ss_pred --hhhhHhhhhccccchHHhcCCc----chhh---hHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHH
Confidence 00000 0000000000000000 0000 0000000000000 015799999999998 55
Q ss_pred ChhhHHHHHhhC-----CCcEEEEEcCCCcccccCchHHHHHHHHHHHhhcCCC
Q 022960 226 PAEDALEFDKFI-----PNHKLHIIEGADHEFTSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 226 ~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
+.+.++.+.+.+ -++++.++++++|.+.. -.+....+.+||.+.+...
T Consensus 234 ~~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~~-w~~~l~~~l~~l~~~l~~~ 286 (304)
T 1sfr_A 234 VRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWEY-WGAQLNAMKPDLQRALGAT 286 (304)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHHH-HHHHHHHTHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhCCCCceEEEecCCCccCHHH-HHHHHHHHHHHHHHhcCCC
Confidence 666666665543 24677777667997521 1344566778888887654
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-19 Score=134.72 Aligned_cols=203 Identities=13% Similarity=0.148 Sum_probs=121.2
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
++.+++|+++||++++.. .|..+.+.|.+ +.|+.+|+||+|. .++++.++++.+.. ..++++
T Consensus 14 ~~~~~~l~~~hg~~~~~~--~~~~~~~~l~~--~~v~~~d~~g~~~------------~~~~~~~~i~~~~~--~~~~~l 75 (230)
T 1jmk_C 14 QDQEQIIFAFPPVLGYGL--MYQNLSSRLPS--YKLCAFDFIEEED------------RLDRYADLIQKLQP--EGPLTL 75 (230)
T ss_dssp TTCSEEEEEECCTTCCGG--GGHHHHHHCTT--EEEEEECCCCSTT------------HHHHHHHHHHHHCC--SSCEEE
T ss_pred CCCCCCEEEECCCCCchH--HHHHHHHhcCC--CeEEEecCCCHHH------------HHHHHHHHHHHhCC--CCCeEE
Confidence 456789999999999884 48999998864 9999999998763 24566666766621 247999
Q ss_pred EEeChhHHHHHHHHHhCC---C-ccEEEEeccCCccccc-ccccccchhHhhhhhcCcccccccccccccccChhhhhhh
Q 022960 122 IGHSKGGNAVLLYASKYN---D-ISIVINISGRFNLKRG-IEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDR 196 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (289)
+|||+||.+|+.+|.+.+ + +++++++++....... +...........+.... ..............+...
T Consensus 76 ~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 150 (230)
T 1jmk_C 76 FGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVN-----RDNEALNSEAVKHGLKQK 150 (230)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHT-----TTCSGGGSHHHHHHHHHH
T ss_pred EEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcC-----hhhhhhhhHHHHHHHHHH
Confidence 999999999999998763 4 9999999875432110 00000000011110000 000000000000001000
Q ss_pred h--ccchhhh-hcccccCceEEEEEeCCCCccChhhHHHHHhhCC-CcEEEEEcCCCc--ccc-cCchHHHHHHHHHHHh
Q 022960 197 L--STDIHAA-CHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP-NHKLHIIEGADH--EFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 197 ~--~~~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH--~~~-~~~~~~~~~i~~fl~~ 269 (289)
. ...+... ....++++|+++++|++|..++ .....+.+..+ +.+++.+++ +| ++. +.++.+.+.|.+||.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~~~~~~~~~~~i~g-~H~~~~~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 151 THAFYSYYVNLISTGQVKADIDLLTSGADFDIP-EWLASWEEATTGAYRMKRGFG-THAEMLQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp HHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC-TTEECSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhhhccccccccccEEEEEeCCCCCCc-cccchHHHhcCCCeEEEEecC-ChHHHcCcHhHHHHHHHHHHHHhh
Confidence 0 0000000 1223568999999999999887 33444555543 579999997 99 544 3346788888888753
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-18 Score=132.33 Aligned_cols=133 Identities=14% Similarity=0.141 Sum_probs=89.5
Q ss_pred ccceeeEEeeCC-CCceEEEEEeecCCCcEEEEEcCCCC--CCCCcchHH---HHHHHHHcCccEEEEccccCC-CCCCC
Q 022960 19 VVQRRRVVIPNS-HGEKLVGILHETGSKQLVIVCHGFQS--TKDRIPMVN---LAAALEREGISAFRFDFSGNG-ESEGS 91 (289)
Q Consensus 19 ~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~iv~~hG~~~--~~~~~~~~~---~~~~l~~~G~~v~~~d~~G~G-~s~~~ 91 (289)
....+.+++.+. .|.++.+++. |...|+||++||++. +... |.. +.+.+.+.|+.|+++|.++.+ .+...
T Consensus 8 ~~~~~~~~~~S~~~~~~~~~~~~-P~~~p~vvllHG~~~~~~~~~--w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~ 84 (280)
T 1r88_A 8 AAPYENLMVPSPSMGRDIPVAFL-AGGPHAVYLLDAFNAGPDVSN--WVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWE 84 (280)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEE-CCSSSEEEEECCSSCCSSSCH--HHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCS
T ss_pred CCCEEEEEEECcccCCcceEEEe-CCCCCEEEEECCCCCCCChhh--hhhcccHHHHHhcCCeEEEEECCCCCCccCCCC
Confidence 445566777654 5777877744 433589999999963 3332 543 556677779999999997642 21111
Q ss_pred -ccccchHH-HHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 92 -FLYGNYRR-EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 92 -~~~~~~~~-~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
.....+.+ .++|+..+++.....+.++++|+|+||||.+|+.++.++|+ ++++++++|.+...
T Consensus 85 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 150 (280)
T 1r88_A 85 QDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPS 150 (280)
T ss_dssp SCTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcC
Confidence 11123322 34566666654211133589999999999999999999999 99999999987643
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=134.85 Aligned_cols=96 Identities=13% Similarity=0.143 Sum_probs=77.2
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCC-ceEE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGR-VITA 120 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~-~~~~ 120 (289)
.+++++||++||++++.. .|..+++.|. +.|+++|+++. ....++.++++++.+.++.+ .. ++++
T Consensus 21 ~~~~~~l~~~hg~~~~~~--~~~~~~~~L~---~~v~~~d~~~~------~~~~~~~~~a~~~~~~i~~~---~~~~~~~ 86 (283)
T 3tjm_A 21 QSSERPLFLVHPIEGSTT--VFHSLASRLS---IPTYGLQCTRA------APLDSIHSLAAYYIDCIRQV---QPEGPYR 86 (283)
T ss_dssp CSSSCCEEEECCTTCCSG--GGHHHHHHCS---SCEEEECCCTT------SCCSCHHHHHHHHHHHHTTT---CCSSCCE
T ss_pred CCCCCeEEEECCCCCCHH--HHHHHHHhcC---ceEEEEecCCC------CCCCCHHHHHHHHHHHHHHh---CCCCCEE
Confidence 346789999999999885 4999999986 89999999742 22346777888887777655 33 5899
Q ss_pred EEEeChhHHHHHHHHHhC---CC-cc---EEEEeccCC
Q 022960 121 IIGHSKGGNAVLLYASKY---ND-IS---IVINISGRF 151 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~---p~-v~---~~v~~~~~~ 151 (289)
|+||||||.+|+.+|.+. |+ +. ++|++++..
T Consensus 87 l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 87 VAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred EEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 999999999999999865 66 88 999998754
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.8e-17 Score=124.91 Aligned_cols=129 Identities=15% Similarity=0.153 Sum_probs=85.3
Q ss_pred eeEEeeCC-CCceEEEEEeecCCCcEEEEEcCCCC--CCCCcchHHH---HHHHHHcCccEEEEccccCC-CCCC--Cc-
Q 022960 23 RRVVIPNS-HGEKLVGILHETGSKQLVIVCHGFQS--TKDRIPMVNL---AAALEREGISAFRFDFSGNG-ESEG--SF- 92 (289)
Q Consensus 23 ~~~~~~~~-~g~~l~~~~~~~~~~~~iv~~hG~~~--~~~~~~~~~~---~~~l~~~G~~v~~~d~~G~G-~s~~--~~- 92 (289)
+.+++.+. .+.++.+++.+.. .++||++||+++ +... |... .+.+.+.|+.|+++|.+|.+ .+.. +.
T Consensus 7 ~~~~~~s~~~~~~~~v~~~p~~-~~~v~llHG~~~~~~~~~--w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~ 83 (280)
T 1dqz_A 7 EYLQVPSASMGRDIKVQFQGGG-PHAVYLLDGLRAQDDYNG--WDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQ 83 (280)
T ss_dssp EEEEEEETTTTEEEEEEEECCS-SSEEEECCCTTCCSSSCH--HHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCT
T ss_pred EEEEEECcccCceeEEEEcCCC-CCEEEEECCCCCCCCccc--ccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCc
Confidence 34455433 4566766544322 469999999964 5543 5543 35577778999999987542 2211 10
Q ss_pred -----cccchHHH-HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 93 -----LYGNYRRE-AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 93 -----~~~~~~~~-~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
....+.+. ++++..+++.....+.++++|+||||||.+|+.++.++|+ +++++++++.+...
T Consensus 84 ~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~ 152 (280)
T 1dqz_A 84 SNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPS 152 (280)
T ss_dssp TTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTT
T ss_pred cccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccccc
Confidence 12344443 4677777765211123489999999999999999999999 99999999987653
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.9e-18 Score=138.55 Aligned_cols=107 Identities=17% Similarity=0.232 Sum_probs=88.5
Q ss_pred CCcEEEEEcCCCCCCCCcchHH-HHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-C--Cce
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVN-LAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-G--RVI 118 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~-~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~--~~~ 118 (289)
++|+||++||++++... .|.. +++.|.+. ||+|+++|++|+|.|.......++...++|+.++++++.+. + .++
T Consensus 69 ~~p~vvliHG~~~~~~~-~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~~ 147 (452)
T 1w52_X 69 SRKTHFVIHGFRDRGED-SWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPEN 147 (452)
T ss_dssp TSCEEEEECCTTCCSSS-SHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCEEEEEcCCCCCCCc-hHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 57899999999998732 2666 77888765 89999999999999874333345567788999999999643 3 678
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 119 TAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
++|+||||||.+|+.++.++|+ |+++++++|..
T Consensus 148 i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 148 VHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred EEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 9999999999999999999998 99999998753
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=8.2e-18 Score=138.11 Aligned_cols=107 Identities=15% Similarity=0.216 Sum_probs=88.3
Q ss_pred CCcEEEEEcCCCCCCCCcchHH-HHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-C--Cce
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVN-LAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-G--RVI 118 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~-~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~--~~~ 118 (289)
++|+||++||++++... .|.. +++.|.+. ||+|+++|++|+|.|.......++...++|+.++++++.+. + .++
T Consensus 69 ~~p~vvliHG~~~~~~~-~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~~ 147 (452)
T 1bu8_A 69 DRKTRFIVHGFIDKGED-GWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPEN 147 (452)
T ss_dssp TSEEEEEECCSCCTTCT-THHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCeEEEECCCCCCCCc-hHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 57899999999998732 3666 77888764 89999999999999874333345567789999999999643 3 478
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 119 TAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
++|+||||||.+|+.+|.++|+ |+++++++|..
T Consensus 148 i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 148 VHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred eEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 9999999999999999999999 99999998754
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=129.83 Aligned_cols=104 Identities=19% Similarity=0.334 Sum_probs=88.7
Q ss_pred CCCcEEEEEcCCCCCCCC----cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCce
Q 022960 43 GSKQLVIVCHGFQSTKDR----IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVI 118 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~----~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 118 (289)
.++++|||+||++++... ..|..+.+.|.++||.|+++|+||+|.+... .....++++++.++++.+ +.++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~--~~~~~~l~~~i~~~l~~~---~~~~ 80 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP--NGRGEQLLAYVKTVLAAT---GATK 80 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST--TSHHHHHHHHHHHHHHHH---CCSC
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC--CCCHHHHHHHHHHHHHHh---CCCC
Confidence 357899999999988721 2488899999999999999999999998654 235577788888888877 6779
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 119 TAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
++|+||||||.++..++..+|+ |+++|+++++.
T Consensus 81 v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 81 VNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 9999999999999999999998 99999999864
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=9e-16 Score=125.08 Aligned_cols=247 Identities=13% Similarity=0.025 Sum_probs=137.2
Q ss_pred ceeeEEeeCC--CCce--EEEEEeecC----CCcEEEEEcCCCCCCCCc------------------ch-HHHHHHH-HH
Q 022960 21 QRRRVVIPNS--HGEK--LVGILHETG----SKQLVIVCHGFQSTKDRI------------------PM-VNLAAAL-ER 72 (289)
Q Consensus 21 ~~~~~~~~~~--~g~~--l~~~~~~~~----~~~~iv~~hG~~~~~~~~------------------~~-~~~~~~l-~~ 72 (289)
...++.+.+. +|.. ..+.+..|. +.|+|.+-||..+..... .+ ..+...+ .+
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~ 153 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKPASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQ 153 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSCCSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHH
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCCCCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHh
Confidence 3445555443 3443 334444332 368899999987643210 01 2345666 78
Q ss_pred cCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHh---c-CCceEEEEEeChhHHHHHHHHHhC----CC--cc
Q 022960 73 EGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCA---K-GRVITAIIGHSKGGNAVLLYASKY----ND--IS 142 (289)
Q Consensus 73 ~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~---~-~~~~~~l~G~S~Gg~~a~~~a~~~----p~--v~ 142 (289)
+||.|+++|++|+|.+-... .....++.+.++.... . ...++.++|||+||..++.++... |+ +.
T Consensus 154 ~G~~Vv~~Dy~G~G~~y~~~-----~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~ 228 (462)
T 3guu_A 154 QGYYVVSSDHEGFKAAFIAG-----YEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIV 228 (462)
T ss_dssp TTCEEEEECTTTTTTCTTCH-----HHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCEEEEecCCCCCCcccCC-----cchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceE
Confidence 89999999999999742211 1112222233332221 1 236899999999999998887754 45 88
Q ss_pred EEEEeccCCcccccccccccc------------------hh---------------Hhhhhhc--Ccccc----cccccc
Q 022960 143 IVINISGRFNLKRGIEGRLGL------------------GY---------------LQRIKQN--GFIDV----RNKKGK 183 (289)
Q Consensus 143 ~~v~~~~~~~~~~~~~~~~~~------------------~~---------------~~~~~~~--~~~~~----~~~~~~ 183 (289)
+++..+++.++.......-.. .+ +...... ..... ......
T Consensus 229 g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~ 308 (462)
T 3guu_A 229 GASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVF 308 (462)
T ss_dssp EEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTTCCGG
T ss_pred EEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhccCCHH
Confidence 999999877654322110000 00 0000000 00000 000000
Q ss_pred cccc----cChhhhhhhhccchhh----hhcccccCceEEEEEeCCCCccChhhHHHHHhhC----CCcEEEEEcCCCcc
Q 022960 184 LEYR----VTQESLMDRLSTDIHA----ACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI----PNHKLHIIEGADHE 251 (289)
Q Consensus 184 ~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~ 251 (289)
..+. .....+.+.+...... .....++++|++++||.+|+++|.+.++.+.+.+ .+++++.+++.+|.
T Consensus 309 ~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~ 388 (462)
T 3guu_A 309 SLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHL 388 (462)
T ss_dssp GGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHH
T ss_pred HHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCcc
Confidence 0000 0011111111111110 0012356899999999999999999998887765 35789999999998
Q ss_pred cccCchHHHHHHHHHHHhhcCCC
Q 022960 252 FTSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 252 ~~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
... ..-...+.+||++++...
T Consensus 389 ~~~--~~~~~d~l~WL~~r~~G~ 409 (462)
T 3guu_A 389 TAE--IFGLVPSLWFIKQAFDGT 409 (462)
T ss_dssp HHH--HHTHHHHHHHHHHHHHTC
T ss_pred Cch--hhhHHHHHHHHHHHhCCC
Confidence 642 123677899999887654
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-17 Score=127.81 Aligned_cols=102 Identities=22% Similarity=0.298 Sum_probs=86.9
Q ss_pred CCCcEEEEEcCCCCCCC---CcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceE
Q 022960 43 GSKQLVIVCHGFQSTKD---RIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVIT 119 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~---~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 119 (289)
+++++|||+||++++.. .+.|..+.+.|.++||.|+++|+||+|.+. .+..++++++.++++.+ +.+++
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~-----~~~~~~~~~i~~~~~~~---~~~~v 76 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALS---GQPKV 76 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHH---CCSCE
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch-----hhHHHHHHHHHHHHHHh---CCCCE
Confidence 46789999999998753 135889999999999999999999999874 34567778888888877 67789
Q ss_pred EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 120 AIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
+|+||||||.++..++..+|+ |+++|+++++..
T Consensus 77 ~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~~ 110 (285)
T 1ex9_A 77 NLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp EEEEETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred EEEEECHhHHHHHHHHHhChhheeEEEEECCCCC
Confidence 999999999999999999998 999999998543
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.7e-17 Score=129.76 Aligned_cols=109 Identities=19% Similarity=0.233 Sum_probs=84.2
Q ss_pred CCcEEEEEcCCCCCCC--------Ccch----HHHHHHHHHcCcc---EEEEccccCCCCCCCccccchHHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKD--------RIPM----VNLAAALEREGIS---AFRFDFSGNGESEGSFLYGNYRREAEDLRAIV 108 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~--------~~~~----~~~~~~l~~~G~~---v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 108 (289)
.+++|||+||++++.. ...| ..+++.|.++||. |+++|++|+|.|.............+++.+.+
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~I 118 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTFI 118 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHHH
Confidence 5678999999999531 1247 8899999999998 99999999998865431222344455555555
Q ss_pred HHHHhc-CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCc
Q 022960 109 QDFCAK-GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRFN 152 (289)
Q Consensus 109 ~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 152 (289)
+.+.+. +.++++|+||||||.++..++.++ |+ |+++|+++++..
T Consensus 119 ~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 119 DKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 555443 678999999999999999999998 77 999999998754
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.7e-15 Score=115.92 Aligned_cols=126 Identities=13% Similarity=0.171 Sum_probs=87.2
Q ss_pred ceeeEEeeCCCCceEEEEEeecC------CCcEEEEEcCCCCCCCCcc-----hHHHHHHHHHcC----ccEEEEccccC
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG------SKQLVIVCHGFQSTKDRIP-----MVNLAAALEREG----ISAFRFDFSGN 85 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~-----~~~~~~~l~~~G----~~v~~~d~~G~ 85 (289)
..+.+++.+.++ .+.++++.|. +.|+||++||.+++...|. +..+++.|.++| +.|+++|.+|-
T Consensus 40 ~~~~~~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~ 118 (297)
T 1gkl_A 40 RIVKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG 118 (297)
T ss_dssp EEEEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST
T ss_pred eEEEEEEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC
Confidence 345677777766 6776666543 3578999999987664421 346777887764 89999998752
Q ss_pred CCCCCCccccch-HHHHHHHHHHHHHHHhc------------CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 86 GESEGSFLYGNY-RREAEDLRAIVQDFCAK------------GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 86 G~s~~~~~~~~~-~~~~~d~~~~i~~l~~~------------~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
+... ..+ ...++++...++..... +..+++|+|+||||.+++.++.++|+ ++++++++|.+
T Consensus 119 --~~~~---~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 119 --NCTA---QNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp --TCCT---TTHHHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred --ccch---HHHHHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 2111 122 23345666666543211 23569999999999999999999999 99999999865
Q ss_pred c
Q 022960 152 N 152 (289)
Q Consensus 152 ~ 152 (289)
.
T Consensus 194 ~ 194 (297)
T 1gkl_A 194 W 194 (297)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-17 Score=132.74 Aligned_cols=107 Identities=16% Similarity=0.215 Sum_probs=85.2
Q ss_pred CCcEEEEEcCCCCCCCCcchHH-HHHHHH-HcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc---CCce
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVN-LAAALE-REGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK---GRVI 118 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~-~~~~l~-~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~ 118 (289)
.+|++|++||++++... .|.. +++.|. ..+|+|+++|++|||.|.......+....++++.++++.+.+. +.++
T Consensus 68 ~~p~vvliHG~~~s~~~-~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~~ 146 (449)
T 1hpl_A 68 GRKTRFIIHGFIDKGEE-SWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSN 146 (449)
T ss_dssp TSEEEEEECCCCCTTCT-THHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCeEEEEecCCCCCCc-cHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 57899999999988532 3655 667764 4589999999999998863222334556778899999988532 4679
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 119 TAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
++|+||||||.+|..++..+|+ |+++++++|..
T Consensus 147 v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 147 VHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred EEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 9999999999999999999998 99999998753
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.68 E-value=8e-17 Score=131.59 Aligned_cols=107 Identities=13% Similarity=0.190 Sum_probs=85.0
Q ss_pred CCcEEEEEcCCCCCCCCcchHH-HHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc---CCce
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVN-LAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK---GRVI 118 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~-~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~ 118 (289)
.+|++|++||++++... .|.. +.+.|.++ +|+|+++|++|+|.+.......+....++++.++++++.+. +.++
T Consensus 69 ~~p~vvliHG~~~s~~~-~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~~ 147 (450)
T 1rp1_A 69 DKKTRFIIHGFIDKGEE-NWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQ 147 (450)
T ss_dssp TSEEEEEECCCCCTTCT-THHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCeEEEEccCCCCCCc-chHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 57899999999988752 3654 66666554 79999999999998753222345566788999999998532 4679
Q ss_pred EEEEEeChhHHHHHHHHHhCCCccEEEEeccCC
Q 022960 119 TAIIGHSKGGNAVLLYASKYNDISIVINISGRF 151 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~ 151 (289)
++|+||||||.+|..++..+|+|.++++++|..
T Consensus 148 v~LVGhSlGg~vA~~~a~~~p~v~~iv~Ldpa~ 180 (450)
T 1rp1_A 148 VQLIGHSLGAHVAGEAGSRTPGLGRITGLDPVE 180 (450)
T ss_dssp EEEEEETHHHHHHHHHHHTSTTCCEEEEESCCC
T ss_pred EEEEEECHhHHHHHHHHHhcCCcccccccCccc
Confidence 999999999999999999988899999998754
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-15 Score=118.04 Aligned_cols=196 Identities=13% Similarity=0.087 Sum_probs=117.7
Q ss_pred ceeeEEeeCC-CCceEEEEEeecC------CCcEEEEEcCCCCCCCCcchHHHHHHH-HHcC---ccEEEEccccCC---
Q 022960 21 QRRRVVIPNS-HGEKLVGILHETG------SKQLVIVCHGFQSTKDRIPMVNLAAAL-EREG---ISAFRFDFSGNG--- 86 (289)
Q Consensus 21 ~~~~~~~~~~-~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~~~~~~~~l-~~~G---~~v~~~d~~G~G--- 86 (289)
..+.+++.+. .|..+.++++.|. +-|+|+++||.+.......+..+...+ .+.| +.|+.+|+++.+
T Consensus 17 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~ 96 (275)
T 2qm0_A 17 NTEQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFS 96 (275)
T ss_dssp TEEEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCC
T ss_pred CceEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCc
Confidence 3456677765 6778887776553 347899999986411100122233333 3457 899999998631
Q ss_pred -------CCCCC--------------ccccchHHHHHHH-HHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-
Q 022960 87 -------ESEGS--------------FLYGNYRREAEDL-RAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND- 140 (289)
Q Consensus 87 -------~s~~~--------------~~~~~~~~~~~d~-~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~- 140 (289)
.+... ..........+.+ .+++.++.+. +.++++++|||+||.+++.++..+|+
T Consensus 97 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~ 176 (275)
T 2qm0_A 97 GEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNA 176 (275)
T ss_dssp HHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGG
T ss_pred ccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchh
Confidence 11100 0001111222222 2344444433 34689999999999999999999999
Q ss_pred ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeC
Q 022960 141 ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGT 220 (289)
Q Consensus 141 v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 220 (289)
++++++++|.+.+.... +.. . .+.+.... .......|+++++|+
T Consensus 177 f~~~~~~s~~~~~~~~~-----------~~~----------------~-~~~~~~~~--------~~~~~~~~~~l~~G~ 220 (275)
T 2qm0_A 177 FQNYFISSPSIWWNNKS-----------VLE----------------K-EENLIIEL--------NNAKFETGVFLTVGS 220 (275)
T ss_dssp CSEEEEESCCTTHHHHG-----------GGG----------------G-TTHHHHHH--------HTCSSCEEEEEEEET
T ss_pred hceeEEeCceeeeChHH-----------HHH----------------H-HHHHHhhh--------cccCCCceEEEEeCC
Confidence 99999999865321100 000 0 00000000 011236799999999
Q ss_pred CCCccChhhHHHHHhhC---C--C--cEEEEEcCCCccc
Q 022960 221 KDKMVPAEDALEFDKFI---P--N--HKLHIIEGADHEF 252 (289)
Q Consensus 221 ~D~~~~~~~~~~~~~~~---~--~--~~~~~~~~~gH~~ 252 (289)
.|..++...++.+.+.+ . + .++..++|++|..
T Consensus 221 ~D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~ 259 (275)
T 2qm0_A 221 LEREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHAS 259 (275)
T ss_dssp TSCHHHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTT
T ss_pred cccchhhHHHHHHHHHHHhcccCCceEEEEECCCCCccc
Confidence 99988888888887776 3 2 5788999999974
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.67 E-value=8.6e-17 Score=110.20 Aligned_cols=95 Identities=16% Similarity=0.081 Sum_probs=74.8
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~ 109 (289)
.+|.++++. ..+++|+||++| ++... |..+ |++ +|+|+++|+||||.|...... ++++++++.++++
T Consensus 9 ~~g~~~~~~--~~g~~~~vv~~H---~~~~~--~~~~---l~~-~~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~~~~~ 75 (131)
T 2dst_A 9 LYGLNLVFD--RVGKGPPVLLVA---EEASR--WPEA---LPE-GYAFYLLDLPGYGRTEGPRMA--PEELAHFVAGFAV 75 (131)
T ss_dssp ETTEEEEEE--EECCSSEEEEES---SSGGG--CCSC---CCT-TSEEEEECCTTSTTCCCCCCC--HHHHHHHHHHHHH
T ss_pred ECCEEEEEE--EcCCCCeEEEEc---CCHHH--HHHH---HhC-CcEEEEECCCCCCCCCCCCCC--HHHHHHHHHHHHH
Confidence 467777654 344578999999 33322 4444 555 499999999999999876544 7788889998888
Q ss_pred HHHhcCCceEEEEEeChhHHHHHHHHHhCCC
Q 022960 110 DFCAKGRVITAIIGHSKGGNAVLLYASKYND 140 (289)
Q Consensus 110 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 140 (289)
.+ +.++++++|||+||.+++.+|.++|.
T Consensus 76 ~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 76 MM---NLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HT---TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred Hc---CCCccEEEEEChHHHHHHHHHhcCCc
Confidence 87 66789999999999999999999886
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-15 Score=124.63 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=83.5
Q ss_pred CCCcEEEEEcCCCCCCCCcchH--HHHHHHHHc-CccEEEEccccCCCCCCCc----------cccchHHHHHHHHHHHH
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMV--NLAAALERE-GISAFRFDFSGNGESEGSF----------LYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~--~~~~~l~~~-G~~v~~~d~~G~G~s~~~~----------~~~~~~~~~~d~~~~i~ 109 (289)
+++.+||++||+.++... ++. .+...|++. |+.|+++|+||||.|.... ...+.++.++|+..+++
T Consensus 36 ~~g~Pi~l~~Ggeg~~~~-~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~ 114 (446)
T 3n2z_B 36 KNGGSILFYTGNEGDIIW-FCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIK 114 (446)
T ss_dssp TTTCEEEEEECCSSCHHH-HHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCcchh-hhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHH
Confidence 455678888998887542 121 234455554 7899999999999996432 12256888999999999
Q ss_pred HHHhc----CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 110 DFCAK----GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 110 ~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
+++.. ...+++++||||||.+|+.++.++|+ |.++|+.+++..
T Consensus 115 ~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 115 HLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchh
Confidence 99764 23489999999999999999999999 999999876543
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-14 Score=116.46 Aligned_cols=210 Identities=11% Similarity=0.111 Sum_probs=123.9
Q ss_pred eeeEEeeCC-CCceEEEEEeecC-----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCcc----EEEEccccCC-CCCC
Q 022960 22 RRRVVIPNS-HGEKLVGILHETG-----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGIS----AFRFDFSGNG-ESEG 90 (289)
Q Consensus 22 ~~~~~~~~~-~g~~l~~~~~~~~-----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~----v~~~d~~G~G-~s~~ 90 (289)
.+.+.+.+. .|....++++.|. +.|+|+++||.+..... .+..+.+.|.++|+. |+.+|++|++ ++..
T Consensus 168 v~~~~~~S~~~g~~~~~~vy~P~~~~~~~~PvlvllHG~~~~~~~-~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~ 246 (403)
T 3c8d_A 168 AKEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSM-PVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHE 246 (403)
T ss_dssp CEEEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTS-CCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHH
T ss_pred eEEEEEEccccCCcEEEEEEeCCCCCCCCCCEEEEeCCHHHhhcC-cHHHHHHHHHHcCCCCCeEEEEECCCCCcccccc
Confidence 345555543 4556666666442 46899999995432111 134577888888875 9999998632 1211
Q ss_pred CccccchHHHHHHHHHHHHHHHhc-----CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccch
Q 022960 91 SFLYGNYRREAEDLRAIVQDFCAK-----GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLG 164 (289)
Q Consensus 91 ~~~~~~~~~~~~d~~~~i~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~ 164 (289)
......+.+.. +.+++.++.+. +.++++|+|+||||.+++.++..+|+ ++++++++|.+.....-
T Consensus 247 ~~~~~~~~~~l--~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~------- 317 (403)
T 3c8d_A 247 LPCNADFWLAV--QQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG------- 317 (403)
T ss_dssp SSSCHHHHHHH--HHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT-------
T ss_pred CCChHHHHHHH--HHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCC-------
Confidence 11111222211 13344444443 34689999999999999999999999 99999999876432100
Q ss_pred hHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----Cc
Q 022960 165 YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NH 240 (289)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~ 240 (289)
.. ....+...+.. ........|+++++|+.|..+ .+.++.+.+.+. ++
T Consensus 318 -------~~---------------~~~~~~~~~~~-----~~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v 369 (403)
T 3c8d_A 318 -------GQ---------------QEGVLLEKLKA-----GEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESI 369 (403)
T ss_dssp -------SS---------------SCCHHHHHHHT-----TSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSE
T ss_pred -------CC---------------cHHHHHHHHHh-----ccccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCE
Confidence 00 00011111100 001123679999999998654 566777777664 47
Q ss_pred EEEEEcCCCcccccCchHHHHHHHHHHHhhc
Q 022960 241 KLHIIEGADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 241 ~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
++.+++| +|.+.. -......+..||.+..
T Consensus 370 ~~~~~~G-gH~~~~-w~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 370 FWRQVDG-GHDALC-WRGGLMQGLIDLWQPL 398 (403)
T ss_dssp EEEEESC-CSCHHH-HHHHHHHHHHHHHGGG
T ss_pred EEEEeCC-CCCHHH-HHHHHHHHHHHHhccc
Confidence 8999998 687421 1234455566665543
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-16 Score=129.03 Aligned_cols=107 Identities=19% Similarity=0.281 Sum_probs=75.0
Q ss_pred CCCcEEEEEcCCCCCCC------CcchH----HHHHHHHHcCccEEEEccccCCCCCCCccc------------------
Q 022960 43 GSKQLVIVCHGFQSTKD------RIPMV----NLAAALEREGISAFRFDFSGNGESEGSFLY------------------ 94 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~------~~~~~----~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~------------------ 94 (289)
+.+++|||+||++++.. ..+|. .+.+.|.+.||+|+++|+||||.|......
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 46789999999987521 13464 589999999999999999999987521100
Q ss_pred -cchHHHHHHHHHHHHHHHhcC-CceEEEEEeChhHHHHHHHHHh--------------------------CCC-ccEEE
Q 022960 95 -GNYRREAEDLRAIVQDFCAKG-RVITAIIGHSKGGNAVLLYASK--------------------------YND-ISIVI 145 (289)
Q Consensus 95 -~~~~~~~~d~~~~i~~l~~~~-~~~~~l~G~S~Gg~~a~~~a~~--------------------------~p~-v~~~v 145 (289)
.++..+++|+.++++.+ + .++++||||||||.++..++.. +|+ |.++|
T Consensus 130 ~~~~~~~a~dl~~ll~~l---~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv 206 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKDW---KPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSIT 206 (431)
T ss_dssp HHTCCSEEEEECCSCTTC---BTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEE
T ss_pred cCCHHHHHHHHHHHHHHh---CCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEE
Confidence 00111122223333322 2 3689999999999999998876 577 99999
Q ss_pred EeccCCc
Q 022960 146 NISGRFN 152 (289)
Q Consensus 146 ~~~~~~~ 152 (289)
+++++..
T Consensus 207 ~i~tP~~ 213 (431)
T 2hih_A 207 TIATPHN 213 (431)
T ss_dssp EESCCTT
T ss_pred EECCCCC
Confidence 9998653
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4.4e-14 Score=112.92 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=72.1
Q ss_pred CCCcEEEEEcCCCCCCCC-----cchH----HHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH---
Q 022960 43 GSKQLVIVCHGFQSTKDR-----IPMV----NLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD--- 110 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~-----~~~~----~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~--- 110 (289)
..+++|||+||++++... .+|. .+++.|.++||+|+++|++|+|.+.. .+.++...++.
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~---------~a~~l~~~i~~~~v 74 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD---------RACEAYAQLVGGTV 74 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH---------HHHHHHHHHHCEEE
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc---------cHHHHHHHHHhhhh
Confidence 356789999999987531 2355 45599999999999999999997632 12222222221
Q ss_pred -----H-----------------Hh-cCCceEEEEEeChhHHHHHHHHHh-------------------CC------C-c
Q 022960 111 -----F-----------------CA-KGRVITAIIGHSKGGNAVLLYASK-------------------YN------D-I 141 (289)
Q Consensus 111 -----l-----------------~~-~~~~~~~l~G~S~Gg~~a~~~a~~-------------------~p------~-v 141 (289)
+ .. .+.++++||||||||.++..++.. +| + |
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V 154 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFV 154 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccce
Confidence 0 01 256789999999999999999872 24 4 9
Q ss_pred cEEEEeccCCc
Q 022960 142 SIVINISGRFN 152 (289)
Q Consensus 142 ~~~v~~~~~~~ 152 (289)
+++|+++++..
T Consensus 155 ~sLV~i~tP~~ 165 (387)
T 2dsn_A 155 LSVTTIATPHD 165 (387)
T ss_dssp EEEEEESCCTT
T ss_pred eEEEEECCCCC
Confidence 99999998653
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-13 Score=109.08 Aligned_cols=96 Identities=13% Similarity=0.142 Sum_probs=73.2
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcC-CceEE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKG-RVITA 120 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~ 120 (289)
.+.+++++++||++++.. .|..+.+.|. +.|+.+|+|+ . ....++++.++++.+.++.+ . ..+++
T Consensus 43 ~~~~~~l~~~hg~~g~~~--~~~~~~~~l~---~~v~~~~~~~--~----~~~~~~~~~a~~~~~~i~~~---~~~~~~~ 108 (316)
T 2px6_A 43 QSSERPLFLVHPIEGSTT--VFHSLASRLS---IPTYGLQCTR--A----APLDSIHSLAAYYIDCIRQV---QPEGPYR 108 (316)
T ss_dssp CCSSCCEEEECCTTCCSG--GGHHHHHHCS---SCEEEECCCT--T----SCTTCHHHHHHHHHHHHTTT---CSSCCCE
T ss_pred CCCCCeEEEECCCCCCHH--HHHHHHHhcC---CCEEEEECCC--C----CCcCCHHHHHHHHHHHHHHh---CCCCCEE
Confidence 356789999999999884 4888888874 8999999993 1 12346677777776666544 3 35799
Q ss_pred EEEeChhHHHHHHHHHhCC----C---ccEEEEeccCC
Q 022960 121 IIGHSKGGNAVLLYASKYN----D---ISIVINISGRF 151 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p----~---v~~~v~~~~~~ 151 (289)
++||||||.+|..+|.+.+ . +++++++++..
T Consensus 109 l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 109 VAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp EEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred EEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 9999999999999998753 3 78899888753
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=3.4e-12 Score=98.72 Aligned_cols=190 Identities=11% Similarity=-0.001 Sum_probs=101.7
Q ss_pred ceeeEEeeCCC-CceEEEEEeecC------CCcEEEEEcCCCCCCCCcchHHHHHHHHH-cCccEEEEccccCC------
Q 022960 21 QRRRVVIPNSH-GEKLVGILHETG------SKQLVIVCHGFQSTKDRIPMVNLAAALER-EGISAFRFDFSGNG------ 86 (289)
Q Consensus 21 ~~~~~~~~~~~-g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~~G~G------ 86 (289)
..+.+++.+.. |..+.++++.|. +-|+|+++||...... ....+.+.|++ .+..|+.+++++-.
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~~--~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~ 89 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDR--LDDELLKQLSEKTPPVIVAVGYQTNLPFDLNS 89 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHH--CCHHHHHHHTTSCCCEEEEEEESSSSSCCHHH
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHHH--HHHHHHHHhccCCCeEEEEEcCCCCCcCcccc
Confidence 34566666654 567777665432 2356656666442111 12234455654 45667778886421
Q ss_pred ----CCCCC-c-----------c-ccchHHHHHHH-HHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEE
Q 022960 87 ----ESEGS-F-----------L-YGNYRREAEDL-RAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIV 144 (289)
Q Consensus 87 ----~s~~~-~-----------~-~~~~~~~~~d~-~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~ 144 (289)
.+... . . ........+.+ .+++.++.+. +.++++|+||||||.+++.++.+ |+ ++++
T Consensus 90 R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~ 168 (278)
T 2gzs_A 90 RAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSY 168 (278)
T ss_dssp HHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEE
T ss_pred cccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCeE
Confidence 11100 0 0 01112222222 2333444333 23479999999999999999999 99 9999
Q ss_pred EEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCc
Q 022960 145 INISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKM 224 (289)
Q Consensus 145 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 224 (289)
++++|....... .+..... .+... .....|+++.+|+.|..
T Consensus 169 ~~~s~~~~~~~~-------~~~~~~~-------------------------~~~~~-------~~~~~~i~l~~G~~d~~ 209 (278)
T 2gzs_A 169 YSASPSLGRGYD-------ALLSRVT-------------------------AVEPL-------QFCTKHLAIMEGSATQG 209 (278)
T ss_dssp EEESGGGSTTHH-------HHHHHHH-------------------------TSCTT-------TTTTCEEEEEECCC---
T ss_pred EEeCcchhcCcc-------hHHHHHH-------------------------Hhhcc-------CCCCCcEEEEecCcccc
Confidence 999885432110 0000000 00000 01145899999999976
Q ss_pred cC--------hhhHHHHHhhC----CCcEEEEEcCCCccc
Q 022960 225 VP--------AEDALEFDKFI----PNHKLHIIEGADHEF 252 (289)
Q Consensus 225 ~~--------~~~~~~~~~~~----~~~~~~~~~~~gH~~ 252 (289)
.+ ...++.+.+.+ -+.++.+++|.+|..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~ 249 (278)
T 2gzs_A 210 DNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGP 249 (278)
T ss_dssp --------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHH
T ss_pred ccccchhhhhHHHHHHHHHHHHcCCCeeEEEEcCCCCccc
Confidence 42 45556655544 357889999989974
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.4e-11 Score=102.53 Aligned_cols=106 Identities=12% Similarity=0.044 Sum_probs=73.6
Q ss_pred CCcEEEEEcCCC---CCCCCcchHHHHHHHHHc-CccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc-
Q 022960 44 SKQLVIVCHGFQ---STKDRIPMVNLAAALERE-GISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~-G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~- 114 (289)
+.|+||++||++ ++... +......|+++ |+.|+.+|+| |++.+..............|..+++++++++
T Consensus 96 ~~PviV~iHGGg~~~g~~~~--~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i 173 (489)
T 1qe3_A 96 NLPVMVWIHGGAFYLGAGSE--PLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENI 173 (489)
T ss_dssp SEEEEEEECCSTTTSCCTTS--GGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHG
T ss_pred CCCEEEEECCCccccCCCCC--cccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHH
Confidence 358999999976 33322 22335667666 4999999999 6655432111111123357778888888665
Q ss_pred -----CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCC
Q 022960 115 -----GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRF 151 (289)
Q Consensus 115 -----~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~ 151 (289)
+.++|.|+|+|+||.+++.++... +. ++++|+.++..
T Consensus 174 ~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 174 SAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 456899999999999998877654 34 99999999866
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=7.7e-10 Score=87.67 Aligned_cols=104 Identities=13% Similarity=0.184 Sum_probs=71.1
Q ss_pred EEEEeec-C--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccc-----------cCCCC----CCCccccch
Q 022960 36 VGILHET-G--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFS-----------GNGES----EGSFLYGNY 97 (289)
Q Consensus 36 ~~~~~~~-~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~-----------G~G~s----~~~~~~~~~ 97 (289)
...++.| + +-|+||.+||... . ..+||.++.++.. |+|.= ........+
T Consensus 126 ~~~i~lP~g~~P~Pvii~~~~~~~-~------------~~~G~A~i~f~~~~va~d~~~gsrG~g~f~~ly~~~~~~gal 192 (433)
T 4g4g_A 126 SASIRKPSGAGPFPAIIGIGGASI-P------------IPSNVATITFNNDEFGAQMGSGSRGQGKFYDLFGRDHSAGSL 192 (433)
T ss_dssp EEEEECCSSSCCEEEEEEESCCCS-C------------CCTTSEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHH
T ss_pred EEEEECCCCCCCccEEEEECCCcc-c------------cCCCeEEEEeCCcccccccCCCcCCccccccccCCccchHHH
Confidence 4444443 3 3457777776321 0 2459999999872 22210 001123344
Q ss_pred HHHHHHHHHHHHHHHh----c---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCc
Q 022960 98 RREAEDLRAIVQDFCA----K---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFN 152 (289)
Q Consensus 98 ~~~~~d~~~~i~~l~~----~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~ 152 (289)
..++-++..++++|.. . +.++|.++|||+||..++.+++..++|+.+|..++...
T Consensus 193 ~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~Ri~~vi~~~sg~~ 254 (433)
T 4g4g_A 193 TAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVDRIALTIPQESGAG 254 (433)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCTTCSEEEEESCCTT
T ss_pred HHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCCceEEEEEecCCCC
Confidence 5567799999999987 4 56799999999999999999999999999999876443
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=4.3e-11 Score=93.51 Aligned_cols=139 Identities=16% Similarity=0.161 Sum_probs=83.5
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCCC-cc-EEEEeccCCcc-cccccccccchhHhhhhhcCcccccccccccccccChh
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYND-IS-IVINISGRFNL-KRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQE 191 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~-~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (289)
+.++|+|.|+|+||++++.++..+|+ ++ +++++++.... ..... ....+... + ......+
T Consensus 9 D~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~------~~~~~~~~-~----------~~~~~~~ 71 (318)
T 2d81_A 9 NPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY------YTSCMYNG-Y----------PSITTPT 71 (318)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC------GGGGSTTC-C----------CCCHHHH
T ss_pred CcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH------HHHHhhcc-C----------CCCCCHH
Confidence 45689999999999999999999999 88 88777653211 11000 00000000 0 0000011
Q ss_pred hhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC------CcEEEEEcCCCcccc-cCc--------
Q 022960 192 SLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP------NHKLHIIEGADHEFT-SHQ-------- 256 (289)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~gH~~~-~~~-------- 256 (289)
.+...+..........+ ...|++++||++|.+||++.++++.+.+. +++++.++++||.+. ...
T Consensus 72 ~~~~~~~~~~i~~~~~l-~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~ 150 (318)
T 2d81_A 72 ANMKSWSGNQIASVANL-GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCS 150 (318)
T ss_dssp HHHHHHBTTTBCCGGGG-GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTT
T ss_pred HHHHHhhcccCChhHcC-CCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccc
Confidence 11111111000001111 14699999999999999999998887663 368899999999954 211
Q ss_pred -----------hHHHHHHHHHHHhhc
Q 022960 257 -----------DELASLVIQFIKANY 271 (289)
Q Consensus 257 -----------~~~~~~i~~fl~~~~ 271 (289)
-+-...|.+|+...+
T Consensus 151 ~~~~pyi~~~~~d~~~~i~~ff~g~~ 176 (318)
T 2d81_A 151 LSTSPYISNCNYDGAGAALKWIYGSL 176 (318)
T ss_dssp SCCTTCEEECSSCHHHHHHHHHHSSC
T ss_pred cCCCCcccCCCChHHHHHHHHHhccC
Confidence 235678899997654
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.25 E-value=9.8e-11 Score=92.41 Aligned_cols=98 Identities=13% Similarity=0.179 Sum_probs=64.4
Q ss_pred eEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhh
Q 022960 118 ITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDR 196 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (289)
..+++||||||..++.++.++|+ +++++.++|.+.+... .+...+ ...
T Consensus 138 ~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~~~-------~~~~~~------------------------~~~ 186 (331)
T 3gff_A 138 INVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFDSP-------HYLTLL------------------------EER 186 (331)
T ss_dssp EEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTTTT-------HHHHHH------------------------HHH
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCChH-------HHHHHH------------------------HHH
Confidence 34799999999999999999999 9999999986532210 000000 000
Q ss_pred hccchhhhhcccccCceEEEEEeCCCC-------ccChhhHHHHHhhCC-------CcEEEEEcCCCcccc
Q 022960 197 LSTDIHAACHMICQDCRVLTIHGTKDK-------MVPAEDALEFDKFIP-------NHKLHIIEGADHEFT 253 (289)
Q Consensus 197 ~~~~~~~~~~~~~~~~P~l~i~g~~D~-------~~~~~~~~~~~~~~~-------~~~~~~~~~~gH~~~ 253 (289)
+ .... ....|+++.+|+.|. .++.+.++++.+.+. ++++.++++.+|...
T Consensus 187 ~-----~~~~--~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv 250 (331)
T 3gff_A 187 V-----VKGD--FKQKQLFMAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSV 250 (331)
T ss_dssp H-----HHCC--CSSEEEEEEECCCSEETTTEECCHHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTH
T ss_pred h-----hccc--CCCCeEEEEeCCCCCCCccchHHHHHHHHHHHHHHHHhccCCCceEEEEECCCCCcccc
Confidence 0 0000 125799999999998 355555555554432 367889999999853
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.7e-09 Score=82.24 Aligned_cols=207 Identities=12% Similarity=0.083 Sum_probs=110.8
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEcc--------c---cCCCC----CCCccccchHHHHHHHHHHHH
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDF--------S---GNGES----EGSFLYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--------~---G~G~s----~~~~~~~~~~~~~~d~~~~i~ 109 (289)
-|+||-+||.... ..+||.++.++. + |+|.= ........+..++-++..+|+
T Consensus 106 ~Pvii~i~~~~~~-------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~gal~awaWg~~raid 172 (375)
T 3pic_A 106 YPAIIGYGGGSLP-------------APAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVID 172 (375)
T ss_dssp EEEEEEETTCSSC-------------CCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHH
T ss_pred ccEEEEECCCccc-------------cCCCeEEEEecccccccccCCCCccceecccccCCccchHHHHHHHHHHHHHHH
Confidence 3567778773211 235899999875 1 22210 001123344556778999999
Q ss_pred HHHhc-----CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCccccccccccc
Q 022960 110 DFCAK-----GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKL 184 (289)
Q Consensus 110 ~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (289)
+|+.. +.++|.++|||+||..++.+++..++|+.+|..++...-...+.... . .... ..............
T Consensus 173 ~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~Ri~~~v~~~~g~~G~~~~R~~~--~-~~~~-Ge~v~~~~~~~~e~ 248 (375)
T 3pic_A 173 ALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEKRIVLTLPQESGAGGSACWRISD--Y-LKSQ-GANIQTASEIIGED 248 (375)
T ss_dssp HHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCTTEEEEEEESCCTTTTSCHHHHH--H-HHHT-TCCCCCHHHHTTTC
T ss_pred HHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCCceEEEEeccCCCCchhhhhhhh--h-hccc-CccccccccccCcc
Confidence 99765 34699999999999999999999999999998876433221110000 0 0000 00000000000000
Q ss_pred ccccChhhhhhh------hccchhhhhcccccCceEEEEEeCCCCccChhhHH-------HHHhhCC---CcEEEEEcCC
Q 022960 185 EYRVTQESLMDR------LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDAL-------EFDKFIP---NHKLHIIEGA 248 (289)
Q Consensus 185 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~-------~~~~~~~---~~~~~~~~~~ 248 (289)
.+....+... +..|.......+ ..-|+|++.| +|.+++++... .+++.+. +..+....+-
T Consensus 249 --~Wf~~~~~~y~~~~~~lP~D~h~L~ALi-APRPllv~~g-~D~w~~~~g~~~~~~~a~~VY~~lG~~d~~~~~~~ggH 324 (375)
T 3pic_A 249 --PWFSTTFNSYVNQVPVLPFDHHSLAALI-APRGLFVIDN-NIDWLGPQSCFGCMTAAHMAWQALGVSDHMGYSQIGAH 324 (375)
T ss_dssp --SCSCGGGGGTTTCGGGSSCCHHHHHHTS-TTSEEEEECC-CCGGGCHHHHHHHHHHHHHHHHHTTCGGGEEEECCSCC
T ss_pred --cccccchhhhcccccccCcCHHHHHHHh-CCceEEEecC-CCcccCcHHHHHHHHHHHHHHHHcCCccceEEEeeCCC
Confidence 0000111111 111111111111 2569999999 99888876443 3344443 2455432333
Q ss_pred CcccccCchHHHHHHHHHHHhhcCCC
Q 022960 249 DHEFTSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 249 gH~~~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
+|+ .-+++..+.+.+||++++...
T Consensus 325 ~Hc--~fp~~~~~~~~~F~~k~L~~~ 348 (375)
T 3pic_A 325 AHC--AFPSNQQSQLTAFVQKFLLGQ 348 (375)
T ss_dssp STT--CCCGGGHHHHHHHHHHHTSCC
T ss_pred ccc--cCCHHHHHHHHHHHHHHhCCC
Confidence 453 225566688899999988764
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.22 E-value=7.5e-11 Score=98.36 Aligned_cols=121 Identities=16% Similarity=0.059 Sum_probs=84.0
Q ss_pred CCCceEEEEEeec--CCCcEEEEEcCCC---CCCCCcchHHHHHHHHHcC-ccEEEEccc----cCCCCCCCcc---ccc
Q 022960 30 SHGEKLVGILHET--GSKQLVIVCHGFQ---STKDRIPMVNLAAALEREG-ISAFRFDFS----GNGESEGSFL---YGN 96 (289)
Q Consensus 30 ~~g~~l~~~~~~~--~~~~~iv~~hG~~---~~~~~~~~~~~~~~l~~~G-~~v~~~d~~----G~G~s~~~~~---~~~ 96 (289)
.|+..+..+.-.. ++.|+||++||++ ++... .......|+++| +.|+.+|+| |++.+..... ...
T Consensus 82 edcl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~~--~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~ 159 (498)
T 2ogt_A 82 EDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSS--PWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQA 159 (498)
T ss_dssp SCCCEEEEEESCSSSCCEEEEEEECCSTTTSCCTTC--GGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTG
T ss_pred CCCcEEEEEecCCCCCCCcEEEEEcCCccCCCCCCC--CcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCC
Confidence 4455555432211 2468999999988 44432 222356677765 999999999 8887764321 122
Q ss_pred hHHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCc
Q 022960 97 YRREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRFN 152 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 152 (289)
......|...++++++++ +.++|.|+|+|.||.+++.++... .. ++++|+.++...
T Consensus 160 ~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 160 GNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp GGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 234468888889888775 356899999999999998887754 33 999999998654
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=4e-09 Score=81.91 Aligned_cols=206 Identities=15% Similarity=0.070 Sum_probs=104.5
Q ss_pred CcEEEEEcCCCCCCCCcchHH-HHHHHHHcCccEEEEccccCC--------------CCCCCc---------cccch-HH
Q 022960 45 KQLVIVCHGFQSTKDRIPMVN-LAAALEREGISAFRFDFSGNG--------------ESEGSF---------LYGNY-RR 99 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~-~~~~l~~~G~~v~~~d~~G~G--------------~s~~~~---------~~~~~-~~ 99 (289)
-|+|.++||.+++...|.... ..+.+.+.|..++.+|..-.+ ...... ....+ ..
T Consensus 49 ~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~ 128 (299)
T 4fol_A 49 IPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDY 128 (299)
T ss_dssp BCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHH
T ss_pred cCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHH
Confidence 589999999999876532221 334455568888888742111 000000 01112 23
Q ss_pred HHHHHHHHHHHHHhc-------CCceEEEEEeChhHHHHHHHHHhCC--C-ccEEEEeccCCcccccccccccchhHhhh
Q 022960 100 EAEDLRAIVQDFCAK-------GRVITAIIGHSKGGNAVLLYASKYN--D-ISIVINISGRFNLKRGIEGRLGLGYLQRI 169 (289)
Q Consensus 100 ~~~d~~~~i~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
.++++..+|+.--.. +.++..|.||||||+-|+.++.++| . ..++...++......... ....+...+
T Consensus 129 l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~p~~~~~--~~~~~~~~~ 206 (299)
T 4fol_A 129 IHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPW--GQKAFKGYL 206 (299)
T ss_dssp HHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCCGGGSHH--HHHHHHHHT
T ss_pred HHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccCcccccc--ccccccccc
Confidence 356666666543211 2356899999999999999999864 4 677777776554321110 000011000
Q ss_pred hhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChh-hHHHHHhhC-----C-CcEE
Q 022960 170 KQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAE-DALEFDKFI-----P-NHKL 242 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~-----~-~~~~ 242 (289)
.. . ...........+.... .. .-..++++-+|++|.+.... ..+.+.+.+ + ..++
T Consensus 207 g~-----~----~~~~~~~d~~~l~~~~--------~~-~~~~~i~id~G~~D~f~~~~l~~~~f~~a~~~~g~~~~~~~ 268 (299)
T 4fol_A 207 GE-----E----KAQWEAYDPCLLIKNI--------RH-VGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEI 268 (299)
T ss_dssp C--------------CGGGCHHHHGGGS--------CC-CTTCCEEEEEETTCTTHHHHTCTHHHHHHHTTSTTTTCEEE
T ss_pred cc-----c----hhhhhhcCHHHHHHhc--------cc-CCCCceEEEecCCCcchhhhcCHHHHHHHHHhcCCCceEEE
Confidence 00 0 0000011111111110 00 11457999999999876432 123343332 2 2577
Q ss_pred EEEcCCCcccccCchHHHHHHHHHHHhhc
Q 022960 243 HIIEGADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 243 ~~~~~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
...+|.+|.+.. -..+.+.-.+|..+.+
T Consensus 269 r~~~GydHsy~f-~~~fi~dhl~fha~~L 296 (299)
T 4fol_A 269 KKVHGFDHSYYF-VSTFVPEHAEFHARNL 296 (299)
T ss_dssp EEETTCCSSHHH-HHHHHHHHHHHHHHHT
T ss_pred EeCCCCCCCHHH-HHHHHHHHHHHHHHhc
Confidence 888988998421 1234444455665554
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.97 E-value=2.8e-09 Score=89.88 Aligned_cols=106 Identities=17% Similarity=0.059 Sum_probs=71.9
Q ss_pred CcEEEEEcCCCCCCCC-cchHHHHHHHHH-cCccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc----
Q 022960 45 KQLVIVCHGFQSTKDR-IPMVNLAAALER-EGISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK---- 114 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---- 114 (289)
.|+||++||++....+ .........|+. .|+.|+.+|+| |++.+..... ........|...++++++++
T Consensus 112 ~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~-~~~n~gl~D~~~al~wv~~~i~~f 190 (543)
T 2ha2_A 112 TPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE-APGNVGLLDQRLALQWVQENIAAF 190 (543)
T ss_dssp EEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSS-CCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCC-CCCcccHHHHHHHHHHHHHHHHHh
Confidence 4899999998733221 111222355665 69999999999 4554421111 11233467888888888765
Q ss_pred --CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCC
Q 022960 115 --GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRF 151 (289)
Q Consensus 115 --~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~ 151 (289)
+.++|.|+|+|.||.++..++... +. ++++|+.++..
T Consensus 191 ggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 191 GGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 456999999999999998877653 34 89999998853
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=5.8e-09 Score=87.99 Aligned_cols=105 Identities=17% Similarity=0.129 Sum_probs=71.6
Q ss_pred CCcEEEEEcCCCCCCCCc-chHHHHHHHH-HcCccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc---
Q 022960 44 SKQLVIVCHGFQSTKDRI-PMVNLAAALE-REGISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK--- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~-~~~~~~~~l~-~~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--- 114 (289)
+.|+||++||++....+. .+.. ..|+ +.|+.|+.+|+| |++.+....... ..-..|...++++++++
T Consensus 114 ~~Pv~v~iHGG~~~~g~~~~~~~--~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~--n~gl~D~~~al~wv~~ni~~ 189 (542)
T 2h7c_A 114 RLPVMVWIHGGGLMVGAASTYDG--LALAAHENVVVVTIQYRLGIWGFFSTGDEHSRG--NWGHLDQVAALRWVQDNIAS 189 (542)
T ss_dssp CEEEEEEECCSTTTSCCSTTSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCC--CHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEECCCcccCCCccccCH--HHHHhcCCEEEEecCCCCccccCCCCCcccCcc--chhHHHHHHHHHHHHHHHHH
Confidence 458999999976432211 1221 2344 368999999999 555443221111 22256888888888765
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCc
Q 022960 115 ---GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRFN 152 (289)
Q Consensus 115 ---~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 152 (289)
+.++|.|+|+|.||.++..++... +. ++++|+.++...
T Consensus 190 fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 190 FGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 456899999999999999888763 44 999999998654
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.96 E-value=4.8e-09 Score=88.23 Aligned_cols=108 Identities=19% Similarity=0.099 Sum_probs=73.4
Q ss_pred CCcEEEEEcCCCCCCCC-cchHHHHHHHHH-cCccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc---
Q 022960 44 SKQLVIVCHGFQSTKDR-IPMVNLAAALER-EGISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK--- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--- 114 (289)
+.|+||++||++....+ .........|++ .|+.|+.+|+| |++.+..... ........|...+++|++++
T Consensus 106 ~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~-~~~n~gl~D~~~al~wv~~~i~~ 184 (529)
T 1p0i_A 106 NATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPE-APGNMGLFDQQLALQWVQKNIAA 184 (529)
T ss_dssp SEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTT-SCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCC-CcCcccHHHHHHHHHHHHHHHHH
Confidence 46899999997632221 011122355665 69999999999 5554421111 11233467888888888765
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCc
Q 022960 115 ---GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRFN 152 (289)
Q Consensus 115 ---~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 152 (289)
+.++|.|+|+|.||.++..++... .. ++++|+.++...
T Consensus 185 fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 185 FGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred hCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 456899999999999998887764 23 899999998653
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=5.6e-08 Score=72.70 Aligned_cols=128 Identities=16% Similarity=0.099 Sum_probs=88.4
Q ss_pred eEEeeCCCCceEEEEEeec----CCCcEEEEEcCCCCCCCCcch-HHHHH------------------HHHHcCccEEEE
Q 022960 24 RVVIPNSHGEKLVGILHET----GSKQLVIVCHGFQSTKDRIPM-VNLAA------------------ALEREGISAFRF 80 (289)
Q Consensus 24 ~~~~~~~~g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~~~~-~~~~~------------------~l~~~G~~v~~~ 80 (289)
.+.+....+..+.+++++. .++|++++++|++|++.. + ..+.+ .+.+. .+++.+
T Consensus 23 y~~v~~~~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~--~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~-anvlfi 99 (255)
T 1whs_A 23 YITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSV--AYGASEELGAFRVKPRGAGLVLNEYRWNKV-ANVLFL 99 (255)
T ss_dssp EEEEETTTTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTT--TTHHHHTSSSEEECGGGCCEEECTTCGGGT-SEEEEE
T ss_pred EEECCCCCCcEEEEEEEEecCCCCCCCEEEEECCCCchHHH--HHHHHhccCCeEecCCCCeeeeCccccccc-CCEEEE
Confidence 3344444677888887754 368999999999988753 3 22221 12222 679999
Q ss_pred ccc-cCCCCCCCcc----ccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHhC-----CC--ccEE
Q 022960 81 DFS-GNGESEGSFL----YGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASKY-----ND--ISIV 144 (289)
Q Consensus 81 d~~-G~G~s~~~~~----~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~-----p~--v~~~ 144 (289)
|.| |.|.|..... ..+..+.++|+.++++...+. ...+++|.|.|+||..+..+|... +. ++++
T Consensus 100 DqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi 179 (255)
T 1whs_A 100 DSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGF 179 (255)
T ss_dssp CCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred ecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceE
Confidence 975 9998854332 235567788888888765443 345899999999999888777542 23 8999
Q ss_pred EEeccCCccc
Q 022960 145 INISGRFNLK 154 (289)
Q Consensus 145 v~~~~~~~~~ 154 (289)
++.+|..+..
T Consensus 180 ~ign~~~d~~ 189 (255)
T 1whs_A 180 MVGNGLIDDY 189 (255)
T ss_dssp EEEEECCBHH
T ss_pred EecCCccCHH
Confidence 9999987653
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.89 E-value=8.8e-09 Score=86.73 Aligned_cols=108 Identities=20% Similarity=0.093 Sum_probs=73.4
Q ss_pred CCcEEEEEcCCCCCCCC-cchHHHHHHHH-HcCccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc---
Q 022960 44 SKQLVIVCHGFQSTKDR-IPMVNLAAALE-REGISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK--- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~-~~~~~~~~~l~-~~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--- 114 (289)
+.|+||++||++....+ .........|+ +.|+.|+.+++| |+..+..... .....-..|...+++|++++
T Consensus 108 ~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~-~~~n~gl~D~~~al~wv~~ni~~ 186 (537)
T 1ea5_A 108 STTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQE-APGNVGLLDQRMALQWVHDNIQF 186 (537)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSS-SCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCC-CcCccccHHHHHHHHHHHHHHHH
Confidence 46899999997643221 11112235566 669999999999 4544421111 11123367888888888775
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCc
Q 022960 115 ---GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRFN 152 (289)
Q Consensus 115 ---~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 152 (289)
+.++|.|+|+|.||.++..++... +. ++++|+.++...
T Consensus 187 fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 187 FGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 457999999999999998877652 23 999999998653
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.88 E-value=4.4e-09 Score=88.24 Aligned_cols=107 Identities=17% Similarity=0.089 Sum_probs=71.0
Q ss_pred CCcEEEEEcCCCCCCCC-cchHHHHHHHH---HcCccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc-
Q 022960 44 SKQLVIVCHGFQSTKDR-IPMVNLAAALE---REGISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~-~~~~~~~~~l~---~~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~- 114 (289)
+.|+||++||++....+ ..+.. ..+. ..|+.|+.+|+| |++.+..............|..++++|++++
T Consensus 101 ~~Pviv~iHGGg~~~g~~~~~~~--~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni 178 (522)
T 1ukc_A 101 KLPVWLFIQGGGYAENSNANYNG--TQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYI 178 (522)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCC--HHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHG
T ss_pred CCCEEEEECCCccccCCccccCc--HHHHHhcCCcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHH
Confidence 35899999998743321 11221 1222 458999999999 4544322111112344568889999998775
Q ss_pred -----CCceEEEEEeChhHHHHHHHHHhC----CC-ccEEEEeccCCc
Q 022960 115 -----GRVITAIIGHSKGGNAVLLYASKY----ND-ISIVINISGRFN 152 (289)
Q Consensus 115 -----~~~~~~l~G~S~Gg~~a~~~a~~~----p~-v~~~v~~~~~~~ 152 (289)
+.++|.|+|+|.||..+..++... +. ++++|+.++...
T Consensus 179 ~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~ 226 (522)
T 1ukc_A 179 EQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 226 (522)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcC
Confidence 456899999999998877666543 34 899999998654
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.88 E-value=3.1e-09 Score=89.71 Aligned_cols=105 Identities=11% Similarity=0.063 Sum_probs=71.7
Q ss_pred CcEEEEEcCCCCCCCC-cchHHHHHHHHHcCccEEEEcccc----CCCCCCCccccchHHHHHHHHHHHHHHHhc-----
Q 022960 45 KQLVIVCHGFQSTKDR-IPMVNLAAALEREGISAFRFDFSG----NGESEGSFLYGNYRREAEDLRAIVQDFCAK----- 114 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G----~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~----- 114 (289)
.|+||++||++....+ .........|++.|+.|+.+|+|. +..+.... ........|...++++++++
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~--~~~n~gl~D~~~al~wv~~~i~~fg 192 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTS--VPGNAGLRDMVTLLKWVQRNAHFFG 192 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSSS--CCSCHHHHHHHHHHHHHHHHTGGGT
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcccC--CCCchhHHHHHHHHHHHHHHHHHhC
Confidence 5899999996632211 001123456667899999999993 33332111 11123467888888888765
Q ss_pred -CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCC
Q 022960 115 -GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRF 151 (289)
Q Consensus 115 -~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~ 151 (289)
+.++|.|+|+|.||.+++.++... +. ++++|+.++..
T Consensus 193 gDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 193 GRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp EEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred CChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 456899999999999999887662 44 89999998853
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.86 E-value=1.2e-07 Score=78.41 Aligned_cols=118 Identities=11% Similarity=0.073 Sum_probs=78.5
Q ss_pred CceEEEEEeec------CCCcEEEEEcCCCCCCCCcchHHHHH-----------------HHHHcCccEEEEcc-ccCCC
Q 022960 32 GEKLVGILHET------GSKQLVIVCHGFQSTKDRIPMVNLAA-----------------ALEREGISAFRFDF-SGNGE 87 (289)
Q Consensus 32 g~~l~~~~~~~------~~~~~iv~~hG~~~~~~~~~~~~~~~-----------------~l~~~G~~v~~~d~-~G~G~ 87 (289)
+..+.+++++. .+.|++|+++|++|++.. +..+.+ .+.+. .+++.+|. .|.|.
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~--~g~~~e~GP~~~~~~~~l~~n~~sw~~~-~n~lfiDqPvGtGf 124 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSM--DGALVESGPFRVNSDGKLYLNEGSWISK-GDLLFIDQPTGTGF 124 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTH--HHHHHSSSSEEECTTSCEEECTTCGGGT-SEEEEECCSTTSTT
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhh--hhhHhhcCCeEecCCCceeecccchhhc-CCeEEEecCCCccc
Confidence 56788877653 258999999999998742 322110 11222 67999997 58888
Q ss_pred CCCCcc----------ccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHh-----------CCC--
Q 022960 88 SEGSFL----------YGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASK-----------YND-- 140 (289)
Q Consensus 88 s~~~~~----------~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~-----------~p~-- 140 (289)
|..... ..+....++|+..++....+. ...+++|.|+|+||..+..+|.. .+.
T Consensus 125 Sy~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~in 204 (483)
T 1ac5_A 125 SVEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYD 204 (483)
T ss_dssp CSSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCE
T ss_pred cCCcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccc
Confidence 754321 124456677887777654333 34589999999999988877643 122
Q ss_pred ccEEEEeccCCc
Q 022960 141 ISIVINISGRFN 152 (289)
Q Consensus 141 v~~~v~~~~~~~ 152 (289)
++++++-+|..+
T Consensus 205 LkGi~IGNg~~d 216 (483)
T 1ac5_A 205 LKALLIGNGWID 216 (483)
T ss_dssp EEEEEEEEECCC
T ss_pred eeeeEecCCccc
Confidence 789988887654
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.80 E-value=2.1e-08 Score=84.55 Aligned_cols=108 Identities=13% Similarity=0.056 Sum_probs=69.8
Q ss_pred CCcEEEEEcCCCCCCCCc-ch--HHHH-HHHHH-cCccEEEEcccc----CCCCCCCccccchHHHHHHHHHHHHHHHhc
Q 022960 44 SKQLVIVCHGFQSTKDRI-PM--VNLA-AALER-EGISAFRFDFSG----NGESEGSFLYGNYRREAEDLRAIVQDFCAK 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~-~~--~~~~-~~l~~-~G~~v~~~d~~G----~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~ 114 (289)
+.|+||++||++....+. .+ ..++ +.++. .|+.|+.+|+|. +..+..............|..++++|++++
T Consensus 121 ~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~n 200 (544)
T 1thg_A 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDN 200 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHHH
Confidence 458999999987544321 11 2233 23333 379999999994 211110000111223468888899998775
Q ss_pred ------CCceEEEEEeChhHHHHHHHHHhC--------CC-ccEEEEeccCC
Q 022960 115 ------GRVITAIIGHSKGGNAVLLYASKY--------ND-ISIVINISGRF 151 (289)
Q Consensus 115 ------~~~~~~l~G~S~Gg~~a~~~a~~~--------p~-v~~~v~~~~~~ 151 (289)
+.++|.|+|+|.||.++..++... +. ++++|+.+|..
T Consensus 201 i~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 201 IANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 456899999999999988777652 23 89999998753
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=2.5e-06 Score=69.03 Aligned_cols=128 Identities=13% Similarity=0.098 Sum_probs=83.4
Q ss_pred eeeEEeeCC-CCceEEEEEeec----CCCcEEEEEcCCCCCCCCcchHHHHH-----------------HHHHcCccEEE
Q 022960 22 RRRVVIPNS-HGEKLVGILHET----GSKQLVIVCHGFQSTKDRIPMVNLAA-----------------ALEREGISAFR 79 (289)
Q Consensus 22 ~~~~~~~~~-~g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~~~~~~~~~-----------------~l~~~G~~v~~ 79 (289)
.....++.. .+..+.+++++. .+.|++++++|++|.+.. +..+.+ .+.+. .+++.
T Consensus 16 ~ysGYv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~--~g~~~e~GP~~~~~~~~l~~n~~sW~~~-an~lf 92 (421)
T 1cpy_A 16 QYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSL--TGLFFALGPSSIGPDLKPIGNPYSWNSN-ATVIF 92 (421)
T ss_dssp CCEEEEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTH--HHHTTTTSSEEEETTTEEEECTTCGGGG-SEEEC
T ss_pred eeEEEEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHhH--HHHHHccCCcEECCCCceeECCcccccc-cCEEE
Confidence 344444433 467788877754 368999999999987642 211110 12222 56888
Q ss_pred Eccc-cCCCCCCCcc-ccchHHHHHHHHHHHHHHHhc----CC--ceEEEEEeChhHHHHHHHHHhC-----CC--ccEE
Q 022960 80 FDFS-GNGESEGSFL-YGNYRREAEDLRAIVQDFCAK----GR--VITAIIGHSKGGNAVLLYASKY-----ND--ISIV 144 (289)
Q Consensus 80 ~d~~-G~G~s~~~~~-~~~~~~~~~d~~~~i~~l~~~----~~--~~~~l~G~S~Gg~~a~~~a~~~-----p~--v~~~ 144 (289)
+|.| |.|.|..... ..+....++|+.++++...+. .. .+++|.|.|+||..+..+|... +. ++++
T Consensus 93 iDqPvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi 172 (421)
T 1cpy_A 93 LDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSV 172 (421)
T ss_dssp CCCSTTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEE
T ss_pred ecCCCcccccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeE
Confidence 9954 8887754332 334456678888887665443 23 5899999999999988777542 12 7999
Q ss_pred EEeccCCc
Q 022960 145 INISGRFN 152 (289)
Q Consensus 145 v~~~~~~~ 152 (289)
++-+|..+
T Consensus 173 ~IGNg~~d 180 (421)
T 1cpy_A 173 LIGNGLTD 180 (421)
T ss_dssp EEESCCCC
T ss_pred EecCcccC
Confidence 88777654
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=2.2e-08 Score=84.23 Aligned_cols=108 Identities=14% Similarity=0.030 Sum_probs=69.7
Q ss_pred CCcEEEEEcCCCCCCCCc-ch--HHHH-HHHHH-cCccEEEEcccc----CCCCCCCccccchHHHHHHHHHHHHHHHhc
Q 022960 44 SKQLVIVCHGFQSTKDRI-PM--VNLA-AALER-EGISAFRFDFSG----NGESEGSFLYGNYRREAEDLRAIVQDFCAK 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~-~~--~~~~-~~l~~-~G~~v~~~d~~G----~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~ 114 (289)
+.|+||++||++....+. .+ ..++ +.++. .|+.|+.+|+|. +..+..............|..++++|++++
T Consensus 113 ~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~n 192 (534)
T 1llf_A 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADN 192 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHHHH
Confidence 358999999987543321 11 2233 22332 489999999993 211110000112234468899999999775
Q ss_pred ------CCceEEEEEeChhHHHHHHHHHhC--------CC-ccEEEEeccCC
Q 022960 115 ------GRVITAIIGHSKGGNAVLLYASKY--------ND-ISIVINISGRF 151 (289)
Q Consensus 115 ------~~~~~~l~G~S~Gg~~a~~~a~~~--------p~-v~~~v~~~~~~ 151 (289)
+.++|.|+|+|.||..+..++... +. ++++|+.+|..
T Consensus 193 i~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 193 IAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 457899999999998877766553 23 89999998853
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=7.2e-08 Score=79.75 Aligned_cols=109 Identities=14% Similarity=0.050 Sum_probs=79.2
Q ss_pred cCCCcEEEEEcCCCCCCCCcchH--HHHHHHHHc-CccEEEEccccCCCCCCC---------ccccchHHHHHHHHHHHH
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMV--NLAAALERE-GISAFRFDFSGNGESEGS---------FLYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~--~~~~~l~~~-G~~v~~~d~~G~G~s~~~---------~~~~~~~~~~~d~~~~i~ 109 (289)
++.+|++|++-|=+ ... .++. .+...+++. |-.++.++.|.+|.|.+. ....+.++...|+..+++
T Consensus 40 ~~~gPIfl~~gGEg-~~~-~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~ 117 (472)
T 4ebb_A 40 RGEGPIFFYTGNEG-DVW-AFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLR 117 (472)
T ss_dssp TTTCCEEEEECCSS-CHH-HHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCc-ccc-ccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHH
Confidence 44567777765533 221 1111 133344444 778999999999999752 123466888899999999
Q ss_pred HHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 110 DFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 110 ~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
+++.. ...+++++|-|+||++|..+-.++|+ |.+.+.-+++..
T Consensus 118 ~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv~ 164 (472)
T 4ebb_A 118 ALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVL 164 (472)
T ss_dssp HHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccceE
Confidence 99776 23589999999999999999999999 888888877653
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-07 Score=76.40 Aligned_cols=132 Identities=13% Similarity=-0.027 Sum_probs=86.0
Q ss_pred ccceeeEEeeCCCCceEEEEEeec----CCCcEEEEEcCCCCCCCCcchHHHHH------------------HHHHcCcc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHET----GSKQLVIVCHGFQSTKDRIPMVNLAA------------------ALEREGIS 76 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~~~~~~~~~------------------~l~~~G~~ 76 (289)
.+......++..++..+.+++++. .+.|++|++||++|.+. ++..+.+ .+.+ -.+
T Consensus 18 ~~~~~sGyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss--~~g~~~e~GP~~~~~~~~~l~~n~~sw~~-~~~ 94 (452)
T 1ivy_A 18 SFRQYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS--LDGLLTEHGPFLVQPDGVTLEYNPYSWNL-IAN 94 (452)
T ss_dssp SSCEEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT--HHHHHTTTSSEEECTTSSCEEECTTCGGG-SSE
T ss_pred CceeeEEEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHH--HHHHHHhcCCcEEeCCCceeeeCCCcccc-ccc
Confidence 345556677766678899888754 36899999999999874 2322211 0122 368
Q ss_pred EEEEcc-ccCCCCCCCcc--ccchHHHHHHHHHHH-HHHHhc---CCceEEEEEeChhHHHHHHHHHhC----CC-ccEE
Q 022960 77 AFRFDF-SGNGESEGSFL--YGNYRREAEDLRAIV-QDFCAK---GRVITAIIGHSKGGNAVLLYASKY----ND-ISIV 144 (289)
Q Consensus 77 v~~~d~-~G~G~s~~~~~--~~~~~~~~~d~~~~i-~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~----p~-v~~~ 144 (289)
++.+|. +|.|.|..... ..+-...++|+..++ +++... ...+++|.|+|+||..+..+|... +- ++++
T Consensus 95 ~lfiDqP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~ 174 (452)
T 1ivy_A 95 VLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGL 174 (452)
T ss_dssp EEEECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred EEEEecCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceE
Confidence 999996 69998864321 112234455554443 444432 446899999999999766666542 23 8999
Q ss_pred EEeccCCcc
Q 022960 145 INISGRFNL 153 (289)
Q Consensus 145 v~~~~~~~~ 153 (289)
++.+|..+.
T Consensus 175 ~ign~~~d~ 183 (452)
T 1ivy_A 175 AVGNGLSSY 183 (452)
T ss_dssp EEESCCSBH
T ss_pred EecCCccCh
Confidence 999987653
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=4.4e-08 Score=83.31 Aligned_cols=108 Identities=11% Similarity=-0.008 Sum_probs=71.3
Q ss_pred CCcEEEEEcCCCCCCCCc-chHHHHHHHHH-cCccEEEEccc----cCCCCCCC-----ccccchHHHHHHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRI-PMVNLAAALER-EGISAFRFDFS----GNGESEGS-----FLYGNYRREAEDLRAIVQDFC 112 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~-~~~~~~~~l~~-~G~~v~~~d~~----G~G~s~~~-----~~~~~~~~~~~d~~~~i~~l~ 112 (289)
+.|+||++||++....+. ........|+. .|+.|+.+|+| |+...... ........-..|...+++|++
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv~ 219 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLK 219 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHHH
Confidence 458999999976432210 11122345554 58999999999 44432110 001111223678899999998
Q ss_pred hc------CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCC
Q 022960 113 AK------GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRF 151 (289)
Q Consensus 113 ~~------~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~ 151 (289)
++ +.++|.|+|+|.||..+..++... .. ++++|+.++..
T Consensus 220 ~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 220 DNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 76 456899999999999988777653 23 89999998854
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.71 E-value=6.2e-08 Score=90.28 Aligned_cols=207 Identities=12% Similarity=0.064 Sum_probs=108.8
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAII 122 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~ 122 (289)
+..+.++++|+.++... .|..+...|. .+.|+.++.++. +..++...+.+..+. ...++.++
T Consensus 1056 ~~~~~L~~l~~~~g~~~--~y~~la~~L~--~~~v~~l~~~~~------------~~~~~~~~~~i~~~~--~~gp~~l~ 1117 (1304)
T 2vsq_A 1056 DQEQIIFAFPPVLGYGL--MYQNLSSRLP--SYKLCAFDFIEE------------EDRLDRYADLIQKLQ--PEGPLTLF 1117 (1304)
T ss_dssp TSCCEEECCCCTTCBGG--GGHHHHTTCC--SCEEEECBCCCS------------TTHHHHHHHHHHHHC--CSSCEEEE
T ss_pred ccCCcceeecccccchH--HHHHHHhccc--ccceEeecccCH------------HHHHHHHHHHHHHhC--CCCCeEEE
Confidence 45678999999988774 4777777775 488888876422 233444445555442 23479999
Q ss_pred EeChhHHHHHHHHHhCC---C-ccEEEEeccCCccccc-ccccccchhHhhhhhcCcccccccccccccccChhhhhhhh
Q 022960 123 GHSKGGNAVLLYASKYN---D-ISIVINISGRFNLKRG-IEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL 197 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (289)
|||+||.+|..+|.+.. . +..++++++....... ............+.......... ............+...+
T Consensus 1118 G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~l~~~~l~~~~~~~ 1196 (1304)
T 2vsq_A 1118 GYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEAL-NSEAVKHGLKQKTHAFY 1196 (1304)
T ss_dssp EETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC-----CHHHHHHHHHTTCC--------CTTTGGGHHHHHHHH
T ss_pred EecCCchHHHHHHHHHHhCCCceeEEEEecCcccccccccccccchhhHHHHHHhhhhhhhh-cchhcchHHHHHHHHHH
Confidence 99999999999887642 3 7888888765322111 00000000011111100000000 00000000011111111
Q ss_pred ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC-CCcEEEEEcCCCcccccCc---hHHHHHHHHHHHhhc
Q 022960 198 STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI-PNHKLHIIEGADHEFTSHQ---DELASLVIQFIKANY 271 (289)
Q Consensus 198 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~---~~~~~~i~~fl~~~~ 271 (289)
.... ......++++|++++.|+.|.. +.+....+.+.. ...+++.++| +|+.+.++ +++.+.|.+||....
T Consensus 1197 ~~~~-~~~~~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~G-~H~~ml~~~~~~~~a~~l~~~L~~~~ 1271 (1304)
T 2vsq_A 1197 SYYV-NLISTGQVKADIDLLTSGADFD-IPEWLASWEEATTGVYRMKRGFG-THAEMLQGETLDRNAEILLEFLNTQT 1271 (1304)
T ss_dssp HHHH-C-----CBSSEEEEEECSSCCC-CCSSEECSSTTBSSCCCEEECSS-CTTGGGSHHHHHHHHHHHHHHHHCCC
T ss_pred HHHH-HHhccCCcCCCEEEEEecCccc-cccchhhHHHHhCCCeEEEEeCC-CHHHHCCCHHHHHHHHHHHHHHhccc
Confidence 1000 0011124589999999999863 333333344444 3467888885 99866443 367788888887543
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.68 E-value=1.4e-07 Score=80.04 Aligned_cols=105 Identities=18% Similarity=0.137 Sum_probs=68.5
Q ss_pred CCcEEEEEcCCCCCCCCcc-------hHHHHHHHHHc-CccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIP-------MVNLAAALERE-GISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDF 111 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~-------~~~~~~~l~~~-G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l 111 (289)
+.|+||++||++....+.. +......|+.+ |+.|+.+|+| |+..+.......+ .-..|...+++|+
T Consensus 97 ~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~pgn--~gl~D~~~Al~wv 174 (579)
T 2bce_A 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGN--YGLWDQHMAIAWV 174 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCC--HHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCCCCc--cchHHHHHHHHHH
Confidence 4589999999874321100 01113445543 7999999999 4444322111111 1256888888888
Q ss_pred Hhc------CCceEEEEEeChhHHHHHHHHHh--CCC-ccEEEEeccC
Q 022960 112 CAK------GRVITAIIGHSKGGNAVLLYASK--YND-ISIVINISGR 150 (289)
Q Consensus 112 ~~~------~~~~~~l~G~S~Gg~~a~~~a~~--~p~-v~~~v~~~~~ 150 (289)
+++ +.++|.|+|+|.||.++..++.. ... ++++|+.++.
T Consensus 175 ~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 175 KRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred HHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 765 45689999999999999887765 234 8999998874
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=2.5e-07 Score=78.55 Aligned_cols=103 Identities=15% Similarity=0.117 Sum_probs=70.0
Q ss_pred CCcEEEEEcCCCCCCCCc-chHHHHHHHHHc-CccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc---
Q 022960 44 SKQLVIVCHGFQSTKDRI-PMVNLAAALERE-GISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK--- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~-~~~~~~~~l~~~-G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--- 114 (289)
+.|+||++||++....+. .+.. ..|++. |+.|+.+|+| |+..+...... ...-..|..++++|++++
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~--~n~gl~D~~~al~wv~~ni~~ 205 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAK--GNYGLLDLIQALRWTSENIGF 205 (574)
T ss_dssp CEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCC--CCHHHHHHHHHHHHHHHHGGG
T ss_pred CCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCC--CcccHHHHHHHHHHHHHHHHH
Confidence 358999999987543321 1221 345554 6999999999 44333221111 123467888888888775
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhCC---C-ccEEEEeccC
Q 022960 115 ---GRVITAIIGHSKGGNAVLLYASKYN---D-ISIVINISGR 150 (289)
Q Consensus 115 ---~~~~~~l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~ 150 (289)
+.++|.|+|+|.||.++..++.... . +.++|+.++.
T Consensus 206 fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 206 FGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred hCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 4568999999999999988776542 4 7888988864
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=2.6e-06 Score=65.10 Aligned_cols=105 Identities=20% Similarity=0.251 Sum_probs=66.5
Q ss_pred EEEEEe-ecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEE-EccccCCCCCCCcc-ccchHHHHHHHHHHHHHH
Q 022960 35 LVGILH-ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFR-FDFSGNGESEGSFL-YGNYRREAEDLRAIVQDF 111 (289)
Q Consensus 35 l~~~~~-~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~-~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~~l 111 (289)
+.+++. ....+..||.+||... +.+.+.+.++.+.. .|.++.+ ..... ...+....+++.+.++.+
T Consensus 63 ~~~~v~~~~~~~~iVva~RGT~~---------~~d~l~d~~~~~~~~~~~~~~~--~vh~Gf~~~~~~~~~~~~~~~~~~ 131 (269)
T 1tib_A 63 VTGFLALDNTNKLIVLSFRGSRS---------IENWIGNLNFDLKEINDICSGC--RGHDGFTSSWRSVADTLRQKVEDA 131 (269)
T ss_dssp EEEEEEEETTTTEEEEEECCCSC---------THHHHTCCCCCEEECTTTSTTC--EEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEECCCCEEEEEEeCCCC---------HHHHHHhcCeeeeecCCCCCCC--EecHHHHHHHHHHHHHHHHHHHHH
Confidence 444444 4456788999999863 22455666777766 4555421 11111 123455667888888887
Q ss_pred Hhc-CCceEEEEEeChhHHHHHHHHHhCCC----ccEEEEeccC
Q 022960 112 CAK-GRVITAIIGHSKGGNAVLLYASKYND----ISIVINISGR 150 (289)
Q Consensus 112 ~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~ 150 (289)
.++ ...++++.||||||.+|..++..... +..+.+-+|.
T Consensus 132 ~~~~~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~tfg~P~ 175 (269)
T 1tib_A 132 VREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPR 175 (269)
T ss_dssp HHHCTTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEEESCCC
T ss_pred HHHCCCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 665 34589999999999999999887542 5555544443
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=2.3e-05 Score=60.03 Aligned_cols=134 Identities=15% Similarity=0.037 Sum_probs=90.9
Q ss_pred cccceeeEEeeCCCCceEEEEEeec----CCCcEEEEEcCCCCCCCCcchHHHHHH------------------HHHcCc
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHET----GSKQLVIVCHGFQSTKDRIPMVNLAAA------------------LEREGI 75 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~~~~~~~~~~------------------l~~~G~ 75 (289)
..+......+...++..+.+|+++. .+.|++|++.|++|.+. ++..+.+. +.+. .
T Consensus 19 ~~~~~ysGyv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS--~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~-a 95 (300)
T 4az3_A 19 PSFRQYSGYLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS--LDGLLTEHGPFLVQPDGVTLEYNPYSWNLI-A 95 (300)
T ss_dssp CSSCEEEEEEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCT--HHHHHHTTSSEEECTTSSCEEECTTCGGGS-S
T ss_pred CCcceeeeeeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHH--HHHHHhcCCCceecCCCccccccCccHHhh-h
Confidence 3455566677777788899888764 36899999999998874 23222211 1111 4
Q ss_pred cEEEEccc-cCCCCCCCc--cccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHhC---CC--ccE
Q 022960 76 SAFRFDFS-GNGESEGSF--LYGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASKY---ND--ISI 143 (289)
Q Consensus 76 ~v~~~d~~-G~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~---p~--v~~ 143 (289)
+++.+|.| |.|-|.... ...+..+.+.|+..++...-+. ...+++|.|-|+||..+..+|... +. +++
T Consensus 96 n~lfiD~PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG 175 (300)
T 4az3_A 96 NVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQG 175 (300)
T ss_dssp EEEEECCSTTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEE
T ss_pred cchhhcCCCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCccccc
Confidence 68889977 777775432 2334456677777776544333 355899999999999988887643 33 899
Q ss_pred EEEeccCCccc
Q 022960 144 VINISGRFNLK 154 (289)
Q Consensus 144 ~v~~~~~~~~~ 154 (289)
+++-+|..+..
T Consensus 176 ~~iGNg~~d~~ 186 (300)
T 4az3_A 176 LAVGNGLSSYE 186 (300)
T ss_dssp EEEESCCSBHH
T ss_pred ceecCCccCHH
Confidence 99999887653
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.17 E-value=3.1e-05 Score=59.44 Aligned_cols=89 Identities=13% Similarity=0.182 Sum_probs=54.0
Q ss_pred ecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceE
Q 022960 41 ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVIT 119 (289)
Q Consensus 41 ~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~ 119 (289)
....+..||.+||.... .+.+.+.++.....|....+... .-....+....+++.+.++.+.++ ...++
T Consensus 70 ~~~~~~iVvafRGT~~~---------~d~~~d~~~~~~~~~~~~~~~vh-~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i 139 (279)
T 1tia_A 70 DHTNSAVVLAFRGSYSV---------RNWVADATFVHTNPGLCDGCLAE-LGFWSSWKLVRDDIIKELKEVVAQNPNYEL 139 (279)
T ss_pred ECCCCEEEEEEeCcCCH---------HHHHHhCCcEeecCCCCCCCccC-hhHHHHHHHHHHHHHHHHHHHHHHCCCCeE
Confidence 44567889999998632 23344445555554432111111 111123344456677777766554 34589
Q ss_pred EEEEeChhHHHHHHHHHhCC
Q 022960 120 AIIGHSKGGNAVLLYASKYN 139 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p 139 (289)
++.||||||.+|..++....
T Consensus 140 ~vtGHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 140 VVVGHSLGAAVATLAATDLR 159 (279)
T ss_pred EEEecCHHHHHHHHHHHHHH
Confidence 99999999999999888753
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.16 E-value=8.7e-05 Score=56.03 Aligned_cols=127 Identities=17% Similarity=0.072 Sum_probs=80.0
Q ss_pred eEEeeCCCCceEEEEEeec-C----CCcEEEEEcCCCCCCCCcch-HHHHHH------------------HHHcCccEEE
Q 022960 24 RVVIPNSHGEKLVGILHET-G----SKQLVIVCHGFQSTKDRIPM-VNLAAA------------------LEREGISAFR 79 (289)
Q Consensus 24 ~~~~~~~~g~~l~~~~~~~-~----~~~~iv~~hG~~~~~~~~~~-~~~~~~------------------l~~~G~~v~~ 79 (289)
.+.+....+..+.+++++. . ++|++++++|++|++.. + ..+.+. +.+. .+++.
T Consensus 28 yv~v~~~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~--~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~-anllf 104 (270)
T 1gxs_A 28 YVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSI--GLGAMQELGAFRVHTNGESLLLNEYAWNKA-ANILF 104 (270)
T ss_dssp EEEEETTTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTT--TTHHHHTTSSEEECTTSSCEEECTTCGGGT-SEEEE
T ss_pred EEEcCCCCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccch--hhhhHHhccCceecCCCCcceeCccchhcc-ccEEE
Confidence 3344444567888887765 2 57899999999988753 2 222210 1222 57999
Q ss_pred Ecc-ccCCCCCCCcc---ccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHH---hC---CC--ccE
Q 022960 80 FDF-SGNGESEGSFL---YGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYAS---KY---ND--ISI 143 (289)
Q Consensus 80 ~d~-~G~G~s~~~~~---~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~---~~---p~--v~~ 143 (289)
+|. .|.|.|..... ..+-.+.++|+.++++...+. ...+++|.|.| |-++...+.. .. +. +++
T Consensus 105 iDqPvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkG 183 (270)
T 1gxs_A 105 AESPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQG 183 (270)
T ss_dssp ECCSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEE
T ss_pred EeccccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeee
Confidence 996 58888754321 123345577887777655443 34589999999 6554433222 22 23 899
Q ss_pred EEEeccCCccc
Q 022960 144 VINISGRFNLK 154 (289)
Q Consensus 144 ~v~~~~~~~~~ 154 (289)
+++.+|..+..
T Consensus 184 i~ign~~~d~~ 194 (270)
T 1gxs_A 184 LLVSSGLTNDH 194 (270)
T ss_dssp EEEESCCCBHH
T ss_pred EEEeCCccChh
Confidence 99999977653
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=98.14 E-value=2.1e-05 Score=60.14 Aligned_cols=65 Identities=23% Similarity=0.289 Sum_probs=41.7
Q ss_pred CccEEEEccccC-CCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC
Q 022960 74 GISAFRFDFSGN-GESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 74 G~~v~~~d~~G~-G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
++.+...++||. |..-.......+....+++.+.++.+.+. ...++++.||||||.+|..++...
T Consensus 91 d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 367777888874 21111111223445556666666665544 345799999999999999988766
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=5.7e-07 Score=87.91 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=0.0
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIG 123 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G 123 (289)
.+++++++|+.++.. +.|..+.+.|. ..|+.+.++| .....++++.+++..+.+..+.. ..++.++|
T Consensus 2241 ~~~~Lfc~~~agG~~--~~y~~l~~~l~---~~v~~lq~pg------~~~~~~i~~la~~~~~~i~~~~p--~gpy~L~G 2307 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSI--TVFHGLAAKLS---IPTYGLQCTG------AAPLDSIQSLASYYIECIRQVQP--EGPYRIAG 2307 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccH--HHHHHHHHhhC---CcEEEEecCC------CCCCCCHHHHHHHHHHHHHHhCC--CCCEEEEE
Confidence 457899999999887 44788888774 6888888887 11223455556665555554422 24799999
Q ss_pred eChhHHHHHHHHHhCCC----cc---EEEEecc
Q 022960 124 HSKGGNAVLLYASKYND----IS---IVINISG 149 (289)
Q Consensus 124 ~S~Gg~~a~~~a~~~p~----v~---~~v~~~~ 149 (289)
||+||.+|..+|.+... +. .++++++
T Consensus 2308 ~S~Gg~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2308 YSYGACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp ---------------------------------
T ss_pred ECHhHHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 99999999998876532 44 6677665
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00027 Score=53.92 Aligned_cols=89 Identities=21% Similarity=0.223 Sum_probs=51.9
Q ss_pred EeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHHHHHHHhc-CC
Q 022960 39 LHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAIVQDFCAK-GR 116 (289)
Q Consensus 39 ~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~~l~~~-~~ 116 (289)
......+..||.++|.... .. .+.+ ......++++.....-... ...+....+++.+.++.+.+. ..
T Consensus 68 ~~~~~~~~ivvafRGT~~~------~d---~~~d--~~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~~~ 136 (269)
T 1lgy_A 68 LRSDKQKTIYLVFRGTNSF------RS---AITD--IVFNFSDYKPVKGAKVHAGFLSSYEQVVNDYFPVVQEQLTAHPT 136 (269)
T ss_dssp EEETTTTEEEEEEECCSCC------HH---HHHT--CCCCEEECTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred EEECCCCEEEEEEeCCCcH------HH---HHhh--cCcccccCCCCCCcEeeeehhhhHHHHHHHHHHHHHHHHHHCCC
Confidence 3445567889999998321 11 2222 2223345554311000000 123344556777777776554 34
Q ss_pred ceEEEEEeChhHHHHHHHHHhC
Q 022960 117 VITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
.++.+.||||||.+|..++...
T Consensus 137 ~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 137 YKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp CEEEEEEETHHHHHHHHHHHHH
T ss_pred CeEEEeccChHHHHHHHHHHHH
Confidence 5899999999999999988765
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00093 Score=49.95 Aligned_cols=102 Identities=13% Similarity=0.031 Sum_probs=61.8
Q ss_pred CCcEEEEEcCCCCCCC--CcchHHHHHHHHHcCccEEEE-ccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceE
Q 022960 44 SKQLVIVCHGFQSTKD--RIPMVNLAAALEREGISAFRF-DFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVIT 119 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~-d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~ 119 (289)
++|+|++.+|.+.... ......+++.|.++ +.+-.+ +||-... + ...+..+-+.++...++....+ ...++
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~-~~~q~Vg~YpA~~~---~-y~~S~~~G~~~~~~~i~~~~~~CP~tki 76 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDI-YRWQPIGNYPAAAF---P-MWPSVEKGVAELILQIELKLDADPYADF 76 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTT-SEEEECCSCCCCSS---S-CHHHHHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHh-cCCCccccccCccc---C-ccchHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 5799999999987421 11245666666543 444444 3552211 1 1112233456666666555444 45689
Q ss_pred EEEEeChhHHHHHHHHHhC-----------CC-ccEEEEeccC
Q 022960 120 AIIGHSKGGNAVLLYASKY-----------ND-ISIVINISGR 150 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~-----------p~-v~~~v~~~~~ 150 (289)
+|.|+|.|+.++-.++... .+ |.++++++-+
T Consensus 77 VL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP 119 (254)
T 3hc7_A 77 AMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNP 119 (254)
T ss_dssp EEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCT
T ss_pred EEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCC
Confidence 9999999999998877552 12 7788877643
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0036 Score=45.47 Aligned_cols=90 Identities=13% Similarity=0.187 Sum_probs=55.1
Q ss_pred EEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccC-CCCC--CCccccchHHHHHHHHHHHHHHHhc-CCceEE
Q 022960 47 LVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGN-GESE--GSFLYGNYRREAEDLRAIVQDFCAK-GRVITA 120 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~-G~s~--~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~ 120 (289)
.||+..|.+..........+.+.|.++ |-.+..++||-. |.+. ......+..+-+.++...++....+ ...+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhCCCCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence 467777766554322234666777654 456888888853 2211 0111112233456666666665554 567899
Q ss_pred EEEeChhHHHHHHHHH
Q 022960 121 IIGHSKGGNAVLLYAS 136 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~ 136 (289)
|+|+|.|+.++..++.
T Consensus 86 l~GYSQGA~V~~~~~~ 101 (207)
T 1g66_A 86 LVGYSQGGEIMDVALC 101 (207)
T ss_dssp EEEETHHHHHHHHHHH
T ss_pred EEeeCchHHHHHHHHh
Confidence 9999999999988764
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00042 Score=47.82 Aligned_cols=59 Identities=20% Similarity=0.260 Sum_probs=50.5
Q ss_pred CceEEEEEeCCCCccChhhHHHHHhhCC------------------------CcEEEEEcCCCccc-ccCchHHHHHHHH
Q 022960 211 DCRVLTIHGTKDKMVPAEDALEFDKFIP------------------------NHKLHIIEGADHEF-TSHQDELASLVIQ 265 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~-~~~~~~~~~~i~~ 265 (289)
.+++|+.+|+.|-+++.-..+.+.+.+. +.++..+.++||.. ...|+...+.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 6899999999999999998888887774 46788899999995 4677888999999
Q ss_pred HHHh
Q 022960 266 FIKA 269 (289)
Q Consensus 266 fl~~ 269 (289)
||..
T Consensus 144 fl~~ 147 (153)
T 1whs_B 144 FLQG 147 (153)
T ss_dssp HHHT
T ss_pred HHCC
Confidence 9975
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0045 Score=44.99 Aligned_cols=90 Identities=9% Similarity=0.065 Sum_probs=55.1
Q ss_pred EEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccCC-CCCC--CccccchHHHHHHHHHHHHHHHhc-CCceEE
Q 022960 47 LVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNG-ESEG--SFLYGNYRREAEDLRAIVQDFCAK-GRVITA 120 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G-~s~~--~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~ 120 (289)
.||+..|.+..........+.+.|.++ |-.+..++||-.. .+.. .....+..+-+.++...++....+ ...+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCCCCcEE
Confidence 467777776654322234667777664 4467888888532 2110 011112233356666666665544 567999
Q ss_pred EEEeChhHHHHHHHHH
Q 022960 121 IIGHSKGGNAVLLYAS 136 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~ 136 (289)
|+|+|.|+.++..++.
T Consensus 86 l~GYSQGA~V~~~~~~ 101 (207)
T 1qoz_A 86 LVGYSQGAQIFDNALC 101 (207)
T ss_dssp EEEETHHHHHHHHHHH
T ss_pred EEEeCchHHHHHHHHh
Confidence 9999999999988774
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00093 Score=50.68 Aligned_cols=51 Identities=14% Similarity=0.296 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCC----CccEEEEeccC
Q 022960 99 REAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYN----DISIVINISGR 150 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p----~v~~~v~~~~~ 150 (289)
...+++.+.++.+.+. ...++.+.|||+||.+|..++.... .+. ++..+++
T Consensus 106 ~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~P 161 (261)
T 1uwc_A 106 SVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEP 161 (261)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCC
T ss_pred HHHHHHHHHHHHHHHHCCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCC
Confidence 3445666667666554 4458999999999999998887642 265 4444443
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=97.03 E-value=0.014 Score=41.69 Aligned_cols=103 Identities=14% Similarity=0.110 Sum_probs=61.3
Q ss_pred EEEEEcCCCCCCCC-cchHHHHHHHHHc----CccEEEE--ccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCce
Q 022960 47 LVIVCHGFQSTKDR-IPMVNLAAALERE----GISAFRF--DFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVI 118 (289)
Q Consensus 47 ~iv~~hG~~~~~~~-~~~~~~~~~l~~~----G~~v~~~--d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~ 118 (289)
.||+..|-+..... ..-..+.+.|.++ ...|..+ +||-.-..... ...+..+-+.++...|+....+ ...+
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~-~~~S~~~G~~~~~~~i~~~~~~CP~tk 98 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNAL-PRGTSSAAIREMLGLFQQANTKCPDAT 98 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCcccC-ccccHHHHHHHHHHHHHHHHHhCCCCc
Confidence 45555555443211 1123455555543 2556777 77743211000 0112244567777777766555 5679
Q ss_pred EEEEEeChhHHHHHHHHHhCC----C-ccEEEEeccC
Q 022960 119 TAIIGHSKGGNAVLLYASKYN----D-ISIVINISGR 150 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p----~-v~~~v~~~~~ 150 (289)
++|+|+|.|+.++-.++...| + |.++++++-+
T Consensus 99 iVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 135 (197)
T 3qpa_A 99 LIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYT 135 (197)
T ss_dssp EEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred EEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCC
Confidence 999999999999988777655 3 8888888744
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0018 Score=50.35 Aligned_cols=40 Identities=20% Similarity=0.197 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC
Q 022960 99 REAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
...+++...++.+.+. ...++.+.|||+||.+|..++...
T Consensus 117 ~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~l 157 (319)
T 3ngm_A 117 EISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGANL 157 (319)
T ss_dssp HHHHHHHHHHHHHHHSSTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCceEEeecCHHHHHHHHHHHHH
Confidence 3345666666666554 445899999999999999877653
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0022 Score=48.47 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHh
Q 022960 101 AEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 101 ~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
.+++.+.++.+.++ ...++.+.|||+||.+|..++..
T Consensus 107 ~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 107 HDTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 34555555555444 44589999999999999887765
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.019 Score=41.15 Aligned_cols=103 Identities=16% Similarity=0.033 Sum_probs=61.2
Q ss_pred EEEEEcCCCCCCCC--cchHHHHHHHHHc----CccEEEE--ccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCc
Q 022960 47 LVIVCHGFQSTKDR--IPMVNLAAALERE----GISAFRF--DFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRV 117 (289)
Q Consensus 47 ~iv~~hG~~~~~~~--~~~~~~~~~l~~~----G~~v~~~--d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~ 117 (289)
.||+..|-+..... ..-..+.+.|.++ ...|..+ +||-.-..... ...+...-+.++...++....+ ...
T Consensus 27 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~-~~~S~~~G~~~~~~~i~~~~~~CP~t 105 (201)
T 3dcn_A 27 IYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFL-PDGTSSAAINEARRLFTLANTKCPNA 105 (201)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTS
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccc-cCCCHHHHHHHHHHHHHHHHHhCCCC
Confidence 45566665444321 1123455666543 2557777 67732110000 0112244567777777766555 567
Q ss_pred eEEEEEeChhHHHHHHHHHhCC----C-ccEEEEeccC
Q 022960 118 ITAIIGHSKGGNAVLLYASKYN----D-ISIVINISGR 150 (289)
Q Consensus 118 ~~~l~G~S~Gg~~a~~~a~~~p----~-v~~~v~~~~~ 150 (289)
+++|+|+|.|+.++-.++...| + |.++++++-+
T Consensus 106 kiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 143 (201)
T 3dcn_A 106 AIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYT 143 (201)
T ss_dssp EEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCT
T ss_pred cEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCc
Confidence 9999999999999988776655 2 8888888644
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.054 Score=39.15 Aligned_cols=97 Identities=13% Similarity=0.135 Sum_probs=62.2
Q ss_pred EEEEEcCCCCCCCC-cchHHHHHH-HHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEEEE
Q 022960 47 LVIVCHGFQSTKDR-IPMVNLAAA-LERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITAII 122 (289)
Q Consensus 47 ~iv~~hG~~~~~~~-~~~~~~~~~-l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~ 122 (289)
.||+..|.+..... .....+.+. |... |-....++||-.- .. . + .+-+.++...|+....+ ...+++|+
T Consensus 10 ~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~g~~~~~V~YpA~~----~y-~-S-~~G~~~~~~~i~~~~~~CP~tkivl~ 82 (205)
T 2czq_A 10 VLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADF----SQ-N-S-AAGTADIIRRINSGLAANPNVCYILQ 82 (205)
T ss_dssp EEEEECCTTCCSSSCTTTHHHHHHHHHHSSSEEEEECCSCCCT----TC-C-C-HHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred EEEEecCCCCCCCCCcccHHHHHHHHHhccCCCceeecccccC----CC-c-C-HHHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 46666666554321 124567777 6654 4455677777321 11 1 3 55567777777766555 56789999
Q ss_pred EeChhHHHHHHHHHhC--CC-----ccEEEEeccC
Q 022960 123 GHSKGGNAVLLYASKY--ND-----ISIVINISGR 150 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~--p~-----v~~~v~~~~~ 150 (289)
|+|.|+.++-.++... +. |.++++++-+
T Consensus 83 GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 83 GYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp EETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred eeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 9999999988877654 32 8888888743
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0028 Score=48.52 Aligned_cols=52 Identities=19% Similarity=0.215 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC----CC-ccEEEEeccC
Q 022960 99 REAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY----ND-ISIVINISGR 150 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~----p~-v~~~v~~~~~ 150 (289)
...+++.+.++.+.+. ...++.+.|||+||.+|..++... +. ...++..+++
T Consensus 119 ~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~P 176 (279)
T 3uue_A 119 DLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLP 176 (279)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 3345555555555444 455899999999999999887643 43 4445555543
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.027 Score=39.94 Aligned_cols=103 Identities=11% Similarity=0.054 Sum_probs=59.9
Q ss_pred EEEEEcCCCCCCCCc--chHHHHHHHHHc---CccEEEEc--cccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCce
Q 022960 47 LVIVCHGFQSTKDRI--PMVNLAAALERE---GISAFRFD--FSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVI 118 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~--~~~~~~~~l~~~---G~~v~~~d--~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~ 118 (289)
.||+..|-+...... .-..+.+.|.++ ...|..++ ||-.-... .....+...-++++..+++....+ ...+
T Consensus 16 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~~~~v~v~~V~~~YpA~~~~~-~~~~~s~~~g~~~~~~~i~~~~~~CP~tk 94 (187)
T 3qpd_A 16 TFIFARASTEPGLLGISTGPAVCNRLKLARSGDVACQGVGPRYTADLPSN-ALPEGTSQAAIAEAQGLFEQAVSKCPDTQ 94 (187)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHSTTCEEEEECCSSCCCCGGGG-GSTTSSCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred EEEEeeCCCCCCCCCccccHHHHHHHHHHcCCCceEEeeCCcccCcCccc-cccccchhHHHHHHHHHHHHHHHhCCCCc
Confidence 455555554433211 123455555543 35688888 77321100 000011133456666777655444 6679
Q ss_pred EEEEEeChhHHHHHHHHHhCC----C-ccEEEEeccC
Q 022960 119 TAIIGHSKGGNAVLLYASKYN----D-ISIVINISGR 150 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p----~-v~~~v~~~~~ 150 (289)
++|+|+|.|+.++-.++...| + |.++++++-+
T Consensus 95 ivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 131 (187)
T 3qpd_A 95 IVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYT 131 (187)
T ss_dssp EEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCT
T ss_pred EEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCC
Confidence 999999999999988776655 2 8888888644
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.004 Score=48.17 Aligned_cols=37 Identities=24% Similarity=0.412 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC
Q 022960 102 EDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 102 ~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
+.+...++.+.+. ...++.+.|||+||.+|..++...
T Consensus 138 ~~i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 138 NQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 4445555544443 446899999999999999887753
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.047 Score=41.99 Aligned_cols=105 Identities=13% Similarity=0.110 Sum_probs=61.5
Q ss_pred cEEEEEcCCCCCCCC-----------cchHHHHHHHHHc----CccEEEEccccCCCCC----C-CccccchHHHHHHHH
Q 022960 46 QLVIVCHGFQSTKDR-----------IPMVNLAAALERE----GISAFRFDFSGNGESE----G-SFLYGNYRREAEDLR 105 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~-----------~~~~~~~~~l~~~----G~~v~~~d~~G~G~s~----~-~~~~~~~~~~~~d~~ 105 (289)
-.||+.-|.+..... .+...+...|.++ ...++.++|+-..... + .....+..+-+.++.
T Consensus 41 v~vi~ARGT~E~~~~g~p~~p~~~~~g~~~~v~~~L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~ 120 (302)
T 3aja_A 41 VMMVSIPGTWESSPTDDPFNPTQFPLSLMSNISKPLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTV 120 (302)
T ss_dssp EEEEEECCTTSCCTTSCSSSCCSCTTCTTHHHHHHHHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCCCCCCCCcCcccccchhHHHHHHHHHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHH
Confidence 356777776554321 1345666666653 3446788887542110 0 011112233345666
Q ss_pred HHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC-------C-C-ccEEEEeccC
Q 022960 106 AIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY-------N-D-ISIVINISGR 150 (289)
Q Consensus 106 ~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~-------p-~-v~~~v~~~~~ 150 (289)
..|+....+ ...+++|+|+|.|+.++-.++... + + |.++++++-+
T Consensus 121 ~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP 175 (302)
T 3aja_A 121 KAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADG 175 (302)
T ss_dssp HHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCT
T ss_pred HHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCC
Confidence 666555444 566999999999999988876431 2 3 8888888643
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0067 Score=41.89 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=46.8
Q ss_pred CceEEEEEeCCCCccChhhHHHHHhhCC-----------------------------CcEEEEEcCCCccc-ccCchHHH
Q 022960 211 DCRVLTIHGTKDKMVPAEDALEFDKFIP-----------------------------NHKLHIIEGADHEF-TSHQDELA 260 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~gH~~-~~~~~~~~ 260 (289)
.+++|+.+|+.|-+++.-..+.+.+.+. +..+..+.++||.. ...|+...
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 142 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 142 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHH
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHH
Confidence 6799999999999999888877766552 12366788999995 46778888
Q ss_pred HHHHHHHHh
Q 022960 261 SLVIQFIKA 269 (289)
Q Consensus 261 ~~i~~fl~~ 269 (289)
+.+.+||..
T Consensus 143 ~m~~~fl~g 151 (155)
T 4az3_B 143 TMFSRFLNK 151 (155)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 888899854
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.56 E-value=0.045 Score=37.80 Aligned_cols=59 Identities=22% Similarity=0.271 Sum_probs=47.0
Q ss_pred CceEEEEEeCCCCccChhhHHHHHhhCC---------------------------CcEEEEEcCCCccc-ccCchHHHHH
Q 022960 211 DCRVLTIHGTKDKMVPAEDALEFDKFIP---------------------------NHKLHIIEGADHEF-TSHQDELASL 262 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~gH~~-~~~~~~~~~~ 262 (289)
.+++|+.+|+.|-+++.-..+.+.+.+. +..+..+.++||.. ...|+...+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 6899999999999999888777666552 12466788999995 4667888888
Q ss_pred HHHHHHh
Q 022960 263 VIQFIKA 269 (289)
Q Consensus 263 i~~fl~~ 269 (289)
+.+||..
T Consensus 146 ~~~fl~g 152 (158)
T 1gxs_B 146 FKQFLKG 152 (158)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 8999975
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.033 Score=43.96 Aligned_cols=22 Identities=32% Similarity=0.383 Sum_probs=19.2
Q ss_pred CceEEEEEeChhHHHHHHHHHh
Q 022960 116 RVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 116 ~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
..++++.|||+||.+|..++..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 4689999999999999988764
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=91.84 E-value=0.021 Score=45.93 Aligned_cols=22 Identities=36% Similarity=0.416 Sum_probs=18.8
Q ss_pred ceEEEEEeChhHHHHHHHHHhC
Q 022960 117 VITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
.++.+.|||+||.+|..++...
T Consensus 228 ~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 228 VSITICGHSLGAALATLSATDI 249 (419)
Confidence 3699999999999999887654
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=91.77 E-value=0.41 Score=39.36 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=46.5
Q ss_pred CceEEEEEeCCCCccChhhHHHHHhhCC-----------------------------CcEEEEEcCCCccc-ccCchHHH
Q 022960 211 DCRVLTIHGTKDKMVPAEDALEFDKFIP-----------------------------NHKLHIIEGADHEF-TSHQDELA 260 (289)
Q Consensus 211 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~gH~~-~~~~~~~~ 260 (289)
.++||+.+|+.|-+++.-..+.+.+.+. +..+..+.++||.. ...|+...
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al 440 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHH
Confidence 5899999999999999888877766553 12456788999995 46678888
Q ss_pred HHHHHHHHh
Q 022960 261 SLVIQFIKA 269 (289)
Q Consensus 261 ~~i~~fl~~ 269 (289)
+.+.+||..
T Consensus 441 ~m~~~fl~g 449 (452)
T 1ivy_A 441 TMFSRFLNK 449 (452)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 888898853
|
| >2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=89.56 E-value=0.77 Score=35.82 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=24.0
Q ss_pred HHHHHHHhc---CCceEEEEEeChhHHHHHHHHHh
Q 022960 106 AIVQDFCAK---GRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 106 ~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
++.+.++.. ++.+-.++|||+|=+.|+.++..
T Consensus 82 al~~ll~~~~~~Gi~P~~v~GHSlGE~aAa~~AG~ 116 (321)
T 2h1y_A 82 IAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGA 116 (321)
T ss_dssp HHHHHHHHHSTTSCCCSEEEECTHHHHHHHHHHTT
T ss_pred HHHHHHHHhhhcCCCccEEEEcCHHHHHHHHHcCC
Confidence 344555555 77888999999999999886643
|
| >3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=87.60 E-value=0.86 Score=36.69 Aligned_cols=30 Identities=27% Similarity=0.251 Sum_probs=22.9
Q ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHH
Q 022960 107 IVQDFCAKGRVITAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 107 ~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 136 (289)
+.+.++..++.+-.++|||+|=+.|+.++.
T Consensus 74 l~~ll~~~Gi~P~av~GHSlGE~aAa~aAG 103 (394)
T 3g87_A 74 YYAKCEDSGETPDFLAGHSLGEFNALLAAG 103 (394)
T ss_dssp HHHHHHHHCCCCSEEEECTTHHHHHHHHTT
T ss_pred HHHHHHHcCCCCceeeecCHHHHHHHHHhC
Confidence 344455558888899999999999887654
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=85.81 E-value=1 Score=35.03 Aligned_cols=40 Identities=10% Similarity=-0.028 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCCCCC----CcchHHHHHHHHH-cCccEEEEcccc
Q 022960 45 KQLVIVCHGFQSTKD----RIPMVNLAAALER-EGISAFRFDFSG 84 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~----~~~~~~~~~~l~~-~G~~v~~~d~~G 84 (289)
.|.||.+||.+++.. .+.-..-...+++ .||.|+.++..+
T Consensus 221 ~~l~v~lHGc~~~~~~~g~~~~~~~~~~~~Ad~~~~iv~yP~~~~ 265 (318)
T 2d81_A 221 CSLHVALHGCLQSYSSIGSRFIQNTGYNKWADTNNMIILYPQAIP 265 (318)
T ss_dssp EEEEEEECCTTCSHHHHTTHHHHHSCHHHHHTTTTEEEEECCBCC
T ss_pred CCEEEEecCCCCCcchhhhhhhcccChHHHHHhCCeEEEeCCCcC
Confidence 479999999999874 2000111234444 489999988754
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A | Back alignment and structure |
|---|
Probab=82.21 E-value=1.4 Score=35.68 Aligned_cols=29 Identities=28% Similarity=0.303 Sum_probs=22.1
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHH
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYAS 136 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~ 136 (289)
.+.++..++.+-.++|||+|=+.|+.++.
T Consensus 159 ~~ll~~~Gv~P~~v~GHS~GE~aAa~~AG 187 (401)
T 4amm_A 159 IRWLDRLGARPVGALGHSLGELAALSWAG 187 (401)
T ss_dssp HHHHHHHTCCCSEEEECTTHHHHHHHHTT
T ss_pred HHHHHHcCCCCCEEEECCHHHHHHHHHhC
Confidence 34444448888899999999999887553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 289 | ||||
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 7e-25 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 3e-17 | |
| d2fuka1 | 218 | c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas ca | 6e-16 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 7e-16 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 3e-15 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 1e-11 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 3e-11 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 3e-11 | |
| d2i3da1 | 218 | c.69.1.36 (A:2-219) Hypothetical protein Atu1826 { | 3e-11 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 4e-11 | |
| d1uxoa_ | 186 | c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus | 5e-10 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 8e-10 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 1e-09 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 1e-09 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 2e-09 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 2e-09 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 2e-09 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 6e-09 | |
| d1vkha_ | 263 | c.69.1.32 (A:) Putative serine hydrolase Ydr428c { | 8e-09 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 9e-09 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 3e-08 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 3e-08 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 4e-08 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 6e-08 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 8e-08 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 8e-08 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 1e-07 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 1e-07 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 2e-07 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 2e-07 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 4e-07 | |
| d1jfra_ | 260 | c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [Ta | 5e-07 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 7e-07 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 1e-06 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 2e-06 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 2e-06 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 2e-06 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 9e-06 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 8e-05 | |
| d1dqza_ | 280 | c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculo | 2e-04 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 6e-04 | |
| d1ei9a_ | 279 | c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {C | 0.001 | |
| d2d81a1 | 318 | c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer | 0.001 |
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 99.2 bits (246), Expect = 7e-25
Identities = 45/236 (19%), Positives = 74/236 (31%), Gaps = 12/236 (5%)
Query: 26 VIPNSHGEKLVGILH-----ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRF 80
V+ ++G++L +++ GF D LA L G FR+
Sbjct: 8 VLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDH--FAGLAEYLSTNGFHVFRY 65
Query: 81 DFSG-NGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYN 139
D G S GS L + KG +I S S
Sbjct: 66 DSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLE 125
Query: 140 DISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST 199
+S +I G NL+ +E LG YL D+ + KL V +
Sbjct: 126 -LSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWD 184
Query: 200 DIHAACHMICQ-DCRVLTIHGTKDKMVPAEDALEFDKFIPN--HKLHIIEGADHEF 252
+ + + ++ D V E+ + I KL+ + G+ H+
Sbjct: 185 TLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDL 240
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 76.8 bits (187), Expect = 3e-17
Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 8/233 (3%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102
++ V++ HGF + L LE +G + + G+G ++ +
Sbjct: 9 AGERAVLLLHGFTGNSAD--VRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQ 66
Query: 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLG 162
D+ + KG A+ G S GG L IV + +
Sbjct: 67 DVMNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGV 126
Query: 163 LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAAC--HMICQDCRVLTIHGT 220
L Y + K+ + ++E + ++ A H+ +
Sbjct: 127 LEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQAR 186
Query: 221 KDKMVPAEDALEFDKFI--PNHKLHIIEGADHEFT--SHQDELASLVIQFIKA 269
D+M+ + A I P ++ E + H T +D+L + F+++
Sbjct: 187 HDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLES 239
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Score = 73.0 bits (178), Expect = 6e-16
Identities = 39/263 (14%), Positives = 70/263 (26%), Gaps = 63/263 (23%)
Query: 17 DPV--VQRRRVVIPNSHGEKLVGILH-----ETGSKQLVIVCH---GFQSTKDRIPMVNL 66
+P+ + + + G L + IVCH + +
Sbjct: 1 NPLFPTESAALTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMA 59
Query: 67 AAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSK 126
A AL GI+ RF+F G S GS + + E +DLRA+ + A+ T +
Sbjct: 60 ARALRELGITVVRFNFRSVGTSAGS--FDHGDGEQDDLRAVAEWVRAQRPTDTLWLAGFS 117
Query: 127 GGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEY 186
G V L ++ I
Sbjct: 118 FGAYVSLR------------------------------AAAALEPQVLIS---------- 137
Query: 187 RVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE-FDKFIPNHKLHII 245
+ + L I G D++V + + + L +
Sbjct: 138 ---------IAPPAGRWDFSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRM 188
Query: 246 EGADHEFTSHQDELASLVIQFIK 268
H F +L + ++
Sbjct: 189 PDTSHFFHRKLIDLRGALQHGVR 211
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 74.6 bits (182), Expect = 7e-16
Identities = 44/283 (15%), Positives = 92/283 (32%), Gaps = 21/283 (7%)
Query: 5 RPTQSYRQGFQ-QDPVVQRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPM 63
R + Y++ P +R +V+ V I G VI+ G +STK+
Sbjct: 90 RKVELYQKAAPLLSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEE--S 147
Query: 64 VNLAAALEREGISAFRFDFSGNGESEG-SFLYGNYRREAEDLRAIVQDFCAKGRVITAII 122
+ + G++ FD G GE + G+Y + + ++ A ++
Sbjct: 148 FQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVL 207
Query: 123 GHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKG 182
G S GGN L A+ ++ I+ G +L + + + +
Sbjct: 208 GRSLGGNYALKSAACEPRLAACISWGGFSDLDYWDLETPLTKESWKY-VSKVDTLEEARL 266
Query: 183 KLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHK- 241
+ + ++ +++ C +HG D+ VP + +P
Sbjct: 267 HVHAALETRDVLSQIA-------------CPTYILHGVHDE-VPLSFVDTVLELVPAEHL 312
Query: 242 -LHIIEGADHEFTSHQDELASLVIQFIKANYQKDGPTSKRADG 283
L + + DH + + ++ + G
Sbjct: 313 NLVVEKDGDHCCHNLGIRPRLEMADWLYDVLVAGKKVAPTMKG 355
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 72.1 bits (175), Expect = 3e-15
Identities = 40/292 (13%), Positives = 83/292 (28%), Gaps = 41/292 (14%)
Query: 4 TRPTQSYRQGFQQDPVVQRRRVVIPNSHGEKLVGIL---HETGSKQLVIVCHGFQSTKDR 60
+ + V+ R+ + ++ G + G ++ HG+ ++ D
Sbjct: 38 VQAEPDLQPVDYPADGVKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDG 97
Query: 61 IPMVNLAAALEREGISAFRFDFSGNGESEGSF-----------LYGNYRREAEDLRAIVQ 109
++ G + F G SE + G ++ R +
Sbjct: 98 --EIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYL 155
Query: 110 DFCAKGRVITA----------IIGHSKGGNAVLLYASKYNDI-SIVINISGRFNLKRGIE 158
D VI++ + G S+GG + A+ + + V + N +R I+
Sbjct: 156 DAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAID 215
Query: 159 GRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIH 218
L YL+ + + ++ VL
Sbjct: 216 VALEQPYLEINSFFRRNGSPETEVQAMKTLSY----------FDIMNLADRVKVPVLMSI 265
Query: 219 GTKDKMVPAEDALE-FDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269
G DK+ P ++ +L + HE+ + F K
Sbjct: 266 GLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIPAFQT---EKLAFFKQ 314
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 60.9 bits (146), Expect = 1e-11
Identities = 40/245 (16%), Positives = 72/245 (29%), Gaps = 47/245 (19%)
Query: 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--------LY 94
K L++ HG Q +K+ ++ L G FD +GE EG +
Sbjct: 22 APKALLLALHGLQGSKEH--ILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVE 79
Query: 95 GNYRREAEDLRAIVQDFCAKGRVIT---AIIGHSKGGNAVLLYASKYNDISIVINISGRF 151
YR + R + G S G L ++ V+
Sbjct: 80 EVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLA----- 134
Query: 152 NLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQD 211
FI + +V ++ + L A
Sbjct: 135 ----------------------FIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGG 172
Query: 212 CRVLTIHGTKDKMVPAEDALEFDKFIPNH------KLHIIEGADHEFT-SHQDELASLVI 264
+L +HG++D +VP + + + H + EGA H T + +
Sbjct: 173 VPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLE 232
Query: 265 QFIKA 269
+++A
Sbjct: 233 HWLEA 237
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 60.2 bits (144), Expect = 3e-11
Identities = 43/254 (16%), Positives = 79/254 (31%), Gaps = 27/254 (10%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99
H+ G Q VI+ HG L + D G G ++ Y +
Sbjct: 18 HDVGEGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKD 77
Query: 100 EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISG-------RFN 152
D + D + I+G++ GG + A +Y++ + + G
Sbjct: 78 SWVDHIIGIMDALEIEKAH--IVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTE 135
Query: 153 LKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQD- 211
+ G R + F R+ R+ E+ + + ++ +
Sbjct: 136 GLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQR 195
Query: 212 ----------------CRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTS 254
L IHG +D++VP +L + I +LH+ H
Sbjct: 196 WIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIE 255
Query: 255 HQDELASLVIQFIK 268
D LV++F
Sbjct: 256 QTDRFNRLVVEFFN 269
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 60.3 bits (144), Expect = 3e-11
Identities = 18/106 (16%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 165 YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKM 224
++ I ++ F + + + V ES+ + + + + VL HG +D++
Sbjct: 176 GMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRI 235
Query: 225 VPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFIKA 269
VP + +L K + + +L +++ H D + ++++ +A
Sbjct: 236 VPLDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 59.5 bits (143), Expect = 3e-11
Identities = 40/254 (15%), Positives = 68/254 (26%), Gaps = 59/254 (23%)
Query: 25 VVIPNSHGEKLVGILH--ETGSKQLVIVCHG---FQSTKDRIPMVNLAAALEREGISAFR 79
V+ G +L G + S + I+ H F T + + L ++ G + R
Sbjct: 3 VIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLR 61
Query: 80 FDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYN 139
F+F G S+G F +G + G+S G + +
Sbjct: 62 FNFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRP 121
Query: 140 DISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLST 199
+I F +L +G I
Sbjct: 122 EI-------EGFMSIAPQPNTYDFSFLAPCPSSGLI------------------------ 150
Query: 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDK-----FIPNHKLHIIEGADHEFTS 254
I+G DK+ P +D + + GA+H F
Sbjct: 151 -----------------INGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNG 193
Query: 255 HQDELASLVIQFIK 268
DEL ++
Sbjct: 194 KVDELMGECEDYLD 207
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 60.2 bits (144), Expect = 4e-11
Identities = 36/258 (13%), Positives = 62/258 (24%), Gaps = 30/258 (11%)
Query: 40 HETGSKQLVIVCHGF-QSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98
+E G+ + VI+ HG G D G +S+ +
Sbjct: 25 NEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG 84
Query: 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIE 158
+ G A+ + I +I +
Sbjct: 85 LVNAR-AVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFA 143
Query: 159 GRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQD------- 211
G K K L+ + +SL+ +
Sbjct: 144 PMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLI 203
Query: 212 --------------------CRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE 251
+ G D+ VP + L+ I + +LH+ H
Sbjct: 204 SAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHW 263
Query: 252 -FTSHQDELASLVIQFIK 268
H DE LVI F++
Sbjct: 264 AQWEHADEFNRLVIDFLR 281
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} Length = 186 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Score = 55.5 bits (132), Expect = 5e-10
Identities = 28/225 (12%), Positives = 64/225 (28%), Gaps = 44/225 (19%)
Query: 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAED 103
+KQ+ I+ HG++++ L L +G+ A + + ED
Sbjct: 1 TKQVYII-HGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP-----------RLED 48
Query: 104 LRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGL 163
+ + T ++ HS G A+L + + + I +
Sbjct: 49 WLDTLSLYQHTLHENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAK-------- 100
Query: 164 GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDK 223
+ ++D + +I I D+
Sbjct: 101 -----------------------SLPTLQMLDEFTQGSFDHQKIIESAKHRAVIASKDDQ 137
Query: 224 MVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIK 268
+VP + + + I + L+ ++ H +V +
Sbjct: 138 IVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLT 181
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 56.1 bits (133), Expect = 8e-10
Identities = 45/264 (17%), Positives = 84/264 (31%), Gaps = 40/264 (15%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99
+ GS Q ++ HG+ D + L +G D G+G S + +
Sbjct: 14 KDWGSGQPIVFSHGWPLNADS--WESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDT 71
Query: 100 EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--ISIVINISGRFNLKRGI 157
A+DL ++ + G S GG V Y ++ ++ IS L
Sbjct: 72 YADDLAQLI---EHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKT 128
Query: 158 EGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESL------------------------ 193
E G ++ + ++ + +
Sbjct: 129 EANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAA 188
Query: 194 -------MDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEF-DKFIPNHKLHII 245
+ ++ + D L +HG D++VP E + + L I
Sbjct: 189 GHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIY 248
Query: 246 EGADHE-FTSHQDELASLVIQFIK 268
GA H +H+D+L + ++ FIK
Sbjct: 249 SGAPHGLTDTHKDQLNADLLAFIK 272
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 55.7 bits (132), Expect = 1e-09
Identities = 47/261 (18%), Positives = 89/261 (34%), Gaps = 34/261 (13%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99
+ G+ Q V++ HGF + +AAL G +D G G+S +Y
Sbjct: 18 EDHGTGQPVVLIHGFPLSGHS--WERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDT 75
Query: 100 EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEG 159
A DL +++ + V+ + + + S L + +
Sbjct: 76 FAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDN 135
Query: 160 RLGLGYLQRIKQ--------------NGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAAC 205
G + F D N L R+++E++ + +T
Sbjct: 136 PDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGF 195
Query: 206 HMICQ----------------DCRVLTIHGTKDKMVPAEDALE-FDKFIPNHKLHIIEGA 248
D L +HGT D+ +P E+ F K +P+ + +EGA
Sbjct: 196 FAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGA 255
Query: 249 DHE-FTSHQDELASLVIQFIK 268
H +H +E+ + ++ F+
Sbjct: 256 PHGLLWTHAEEVNTALLAFLA 276
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 55.3 bits (131), Expect = 1e-09
Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 202 HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELA 260
A + L I D + PA IP +L I G H +S LA
Sbjct: 227 SRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSVHGPLA 286
Query: 261 SLVIQFIKA 269
+++ ++
Sbjct: 287 EVILAHTRS 295
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.7 bits (132), Expect = 2e-09
Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDE 258
+ I L + KD ++ + + + +IP+ K IE H E
Sbjct: 250 ACKSLGRKI--LIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTE 307
Query: 259 LASLVIQFIKAN 270
+ ++I+++ ++
Sbjct: 308 VNQILIKWLDSD 319
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 55.5 bits (132), Expect = 2e-09
Identities = 39/287 (13%), Positives = 74/287 (25%), Gaps = 49/287 (17%)
Query: 15 QQDPVVQRRRVVIPNSHGEKLVGILHETGSKQ----LVIVCHGFQSTKDRIPMVNLAAAL 70
V+ V G+++ G L ++ V+ G+ + +
Sbjct: 48 SHLKTVEAYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG---FPHDWLFW 104
Query: 71 EREGISAFRFDFSGNGESEGSFLYGNY-------------------------RREAEDLR 105
G F D G G +Y RR D
Sbjct: 105 PSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAV 164
Query: 106 AIVQDFCAKGRV---ITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLG 162
V+ + +V I G S+GG L ++ ++ R +
Sbjct: 165 RAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVD 224
Query: 163 LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKD 222
I L+ +E ++ R + L G D
Sbjct: 225 THPYAEITNF-----------LKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMD 273
Query: 223 KMVPAEDALE-FDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIK 268
+ P ++ + ++ I +HE A ++F+K
Sbjct: 274 NICPPSTVFAAYNYYAGPKEIRIYPYNNHEG--GGSFQAVEQVKFLK 318
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 54.8 bits (130), Expect = 2e-09
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFI 267
L + G DK+VP E A +F I + +II H H ++ A+ + F+
Sbjct: 208 QVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLSFL 265
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 53.4 bits (126), Expect = 6e-09
Identities = 44/262 (16%), Positives = 82/262 (31%), Gaps = 35/262 (13%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99
+ G + V+ HG+ D + A+ G D G+G S + ++
Sbjct: 14 KDWGQGRPVVFIHGWPLNGDA--WQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDT 71
Query: 100 EAEDLRAIVQDFCAK-------------GRVITAIIGHSKGGNAVLLYASKYNDISIVIN 146
A+DL ++ D + G + +AVLL A I N
Sbjct: 72 FADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKN 131
Query: 147 ISGRFNLKRGIEGRLGLG---YLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHA 203
G + L + GF K+ ++ I
Sbjct: 132 PDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEG 191
Query: 204 ACHMI-------------CQDCRVLTIHGTKDKMVPAED-ALEFDKFIPNHKLHIIEGAD 249
+ D L +HG D++VP + + + IPN +L + EG+
Sbjct: 192 GVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSS 251
Query: 250 HE---FTSHQDELASLVIQFIK 268
H +++ +++F+
Sbjct: 252 HGIAMVPGDKEKFNRDLLEFLN 273
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.0 bits (125), Expect = 8e-09
Identities = 23/240 (9%), Positives = 64/240 (26%), Gaps = 21/240 (8%)
Query: 43 GSKQLVIVCHG------FQSTKDRIPMVN-LAAALEREGISAFRFDFSGNGESEGSFLYG 95
+++ VI HG + D + N + + + + ++ + E
Sbjct: 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLY 88
Query: 96 NYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKR 155
+ I + KG ++GHS G + + D ++ + L
Sbjct: 89 DAVSN------ITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGL 142
Query: 156 GIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAA----CHMICQD 211
+ + + + + +
Sbjct: 143 LQIVKRVFLLDGIYSLKELLIEYPEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFS 202
Query: 212 CRVLTIHGTKDKMVPAEDALEFDKFIPNH----KLHIIEGADHEFTSHQDELASLVIQFI 267
+ +H D+++ + ++ KL++ + H ++A + I
Sbjct: 203 IDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKNGKVAKYIFDNI 262
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 53.0 bits (125), Expect = 9e-09
Identities = 44/259 (16%), Positives = 82/259 (31%), Gaps = 32/259 (12%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99
+ GS + V+ HG+ D L G FD G G S+ + +Y
Sbjct: 14 KDWGSGKPVLFSHGWLLDADM--WEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDT 71
Query: 100 EAEDLRAIVQDFCAKGR--VITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGI 157
A+D+ +++ K V ++ G +++ + ++ ++ F K
Sbjct: 72 FADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDY 131
Query: 158 EGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAAC------------ 205
+ L R K D + +S +
Sbjct: 132 PQGVPLDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKAT 191
Query: 206 --------------HMICQDCRVLTIHGTKDKMVPAEDALEF-DKFIPNHKLHIIEGADH 250
M D L IHG D++VP E + + I +L + + A H
Sbjct: 192 VDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPH 251
Query: 251 E-FTSHQDELASLVIQFIK 268
+H +L ++ F+K
Sbjct: 252 GFAVTHAQQLNEDLLAFLK 270
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 51.5 bits (121), Expect = 3e-08
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 194 MDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE-FDKFIPNHKLHIIEGADHE- 251
++ + D VL HGT D++VP DA + + N L EG H
Sbjct: 198 CIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGM 257
Query: 252 FTSHQDELASLVIQFIKA 269
++H + L ++ F+K+
Sbjct: 258 LSTHPEVLNPDLLAFVKS 275
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 51.4 bits (121), Expect = 3e-08
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFIKA 269
L GT ++P +A + +PN K I H + D + S + +++
Sbjct: 230 PVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPG 289
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 51.1 bits (120), Expect = 4e-08
Identities = 31/253 (12%), Positives = 61/253 (24%), Gaps = 34/253 (13%)
Query: 48 VIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI 107
++ HG L LE G D + +G +
Sbjct: 5 FVLVHGACHGGWS--WYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLME 62
Query: 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQ 167
+ + + + + G N L I + ++ + Y +
Sbjct: 63 LMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNE 122
Query: 168 RIKQNGFIDVRNKKGKL-------------------------------EYRVTQESLMDR 196
R ++D + V SL
Sbjct: 123 RTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFME 182
Query: 197 LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSH 255
+ + + I T+DK +P E I + I+GADH
Sbjct: 183 DLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHMAMLCE 242
Query: 256 QDELASLVIQFIK 268
+L + +++
Sbjct: 243 PQKLCASLLEIAH 255
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 50.7 bits (119), Expect = 6e-08
Identities = 42/263 (15%), Positives = 75/263 (28%), Gaps = 36/263 (13%)
Query: 40 HETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRR 99
+ GS Q V++ HG+ L +G +D G G S +Y
Sbjct: 18 EDQGSGQPVVLIHGYPLDGHS--WERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDT 75
Query: 100 EAEDLRAIVQDFCAK------------------------GRVITAIIGHSKGGNAVLLYA 135
A DL +++ + A + +
Sbjct: 76 FAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDN 135
Query: 136 SKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMD 195
+ + I R + +N + + + V S
Sbjct: 136 PEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPV 195
Query: 196 RLSTDIHAACHMICQD--------CRVLTIHGTKDKMVPAED-ALEFDKFIPNHKLHIIE 246
+ A D L +HGTKD ++P + A F + +P +E
Sbjct: 196 AAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVE 255
Query: 247 GADHE-FTSHQDELASLVIQFIK 268
GA H +H DE+ + + F+
Sbjct: 256 GAPHGLLWTHADEVNAALKTFLA 278
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 50.3 bits (118), Expect = 8e-08
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 209 CQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSHQDELASLVIQFI 267
L G D++ P A + I +LH+ H ++ L+ FI
Sbjct: 228 AIKIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFI 286
Query: 268 KAN 270
+
Sbjct: 287 LKH 289
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 50.3 bits (118), Expect = 8e-08
Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Query: 194 MDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEF-DKFIPNHKLHIIEGADHE- 251
R + D V I G D VP +EF K+ N+ + IE H
Sbjct: 217 NIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFL 276
Query: 252 FTSHQDELASLVIQFIK 268
+ + +
Sbjct: 277 MVEKPEIAIDRIKTAFR 293
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 49.8 bits (117), Expect = 1e-07
Identities = 34/253 (13%), Positives = 65/253 (25%), Gaps = 29/253 (11%)
Query: 40 HETGSKQLVIVC-HGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY---- 94
G + +V HG+ + + L + D G G S G
Sbjct: 5 QTKGQGNVHLVLLHGWGLNAEV--WRCIDEELS-SHFTLHLVDLPGFGRSRGFGALSLAD 61
Query: 95 ------------------GNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYAS 136
A + + + + S +
Sbjct: 62 MAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPD 121
Query: 137 KYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDR 196
++ + ++R + + R E V L
Sbjct: 122 VLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEIL 181
Query: 197 LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTSH 255
+ D+ + L ++G D +VP + DK P+ + +I A H F SH
Sbjct: 182 KTVDLRQPLQNVS--MPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISH 239
Query: 256 QDELASLVIQFIK 268
E L++ +
Sbjct: 240 PAEFCHLLVALKQ 252
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 49.9 bits (117), Expect = 1e-07
Identities = 25/254 (9%), Positives = 59/254 (23%), Gaps = 33/254 (12%)
Query: 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDL 104
V++ H L LE G D + +G E +
Sbjct: 3 AHFVLI-HTICHGAWI--WHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEP 59
Query: 105 RAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLG 164
+ G + + G N + I+ + + +
Sbjct: 60 LLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDK 119
Query: 165 YLQRIKQNGFIDVRNKKGKLE-----------------------------YRVTQESLMD 195
++ + + SL
Sbjct: 120 LMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQ 179
Query: 196 RLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE-FTS 254
+ + + + +D++ E L + K++ +EG DH+ +
Sbjct: 180 NILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLT 239
Query: 255 HQDELASLVIQFIK 268
E+A ++ +
Sbjct: 240 KTKEIAEILQEVAD 253
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 49.4 bits (116), Expect = 2e-07
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFI 267
D + +HG D + P + A + K P +L I + H ++ + E +++
Sbjct: 255 DIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGH--SAFEPENVDALVRAT 309
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 49.1 bits (115), Expect = 2e-07
Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFI 267
+ +HG D ++A + K P +LHI+EGA H + + + ++
Sbjct: 254 HIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGH--SYDEPGILHQLMIAT 308
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 48.2 bits (114), Expect = 4e-07
Identities = 9/116 (7%), Positives = 33/116 (28%), Gaps = 12/116 (10%)
Query: 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREA 101
+ + +++ G +T + N + G + ++ +
Sbjct: 28 SSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT-------QVNT 80
Query: 102 EDLRAIVQDFCAKGRVI-TAIIGHSKGGNAVLLYASKYND----ISIVINISGRFN 152
E + + A ++ S+GG + + + ++ + +
Sbjct: 81 EYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Score = 47.7 bits (112), Expect = 5e-07
Identities = 38/276 (13%), Positives = 72/276 (26%), Gaps = 71/276 (25%)
Query: 6 PTQSYRQGFQQDPVVQRRRVVIPNSHGEKLVGILH-----ETGSKQLVIVCHGFQSTKDR 60
PT + + + + V + G G ++ G+ V++ GF + +
Sbjct: 9 PTNASIEASRGPYATSQTSVSSLVASGF-GGGTIYYPTSTADGTFGAVVISPGFTAYQSS 67
Query: 61 IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVIT- 119
+ L L +G F D + + S L + Q + RV
Sbjct: 68 --IAWLGPRLASQGFVVFTIDTNTTLDQPDSRGRQLL----SALDYLTQRSSVRTRVDAT 121
Query: 120 --AIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDV 177
++GHS GG L A + I ++
Sbjct: 122 RLGVMGHSMGGGGSLEAAKSRTSLKAAIPLT----------------------------- 152
Query: 178 RNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED-ALEFDKF 236
+ L + D + P + F +
Sbjct: 153 ----------------------GWNTDKTWPELRTPTLVVGADGDTVAPVATHSKPFYES 190
Query: 237 IPN---HKLHIIEGADHEF-TSHQDELASLVIQFIK 268
+P + GA H + +A I ++K
Sbjct: 191 LPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLK 226
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 47.5 bits (111), Expect = 7e-07
Identities = 32/264 (12%), Positives = 65/264 (24%), Gaps = 35/264 (13%)
Query: 41 ETGSKQLVIVCHGFQSTKDR-----IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYG 95
+ + + + HG T + R+G S + D SG G S
Sbjct: 54 QRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAI 113
Query: 96 NYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--------ISIVINI 147
N + + + + D A G A G + +V +
Sbjct: 114 NAVKLGKAPASSLPDLFAAGHEA-AWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDW 172
Query: 148 SGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHM 207
G L ++ ++ + + + + C
Sbjct: 173 LGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPK 232
Query: 208 ICQ-----DCRVLTIHGTKDKMVPA-----EDALEFDKFIPNHKL---------HIIEGA 248
VL + G + P + F + + G
Sbjct: 233 PEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGN 292
Query: 249 DHEFT--SHQDELASLVIQFIKAN 270
H + ++A L++ +I N
Sbjct: 293 SHMMMQDRNNLQVADLILDWIGRN 316
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.7 bits (110), Expect = 1e-06
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 42 TGSKQLVIVCHGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98
T +K +++ HG + + + + +AL R+G + + S SE
Sbjct: 4 TQTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVR------- 56
Query: 99 REAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND 140
E L V++ A G+ +IGHS GG + A+ D
Sbjct: 57 --GEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPD 97
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.2 bits (108), Expect = 2e-06
Identities = 32/274 (11%), Positives = 68/274 (24%), Gaps = 57/274 (20%)
Query: 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNGESEGSFLYGNYRREA 101
S + VIV HG + +L + G D ES +
Sbjct: 1 SYKPVIVVHGLFDSSYS--FRHLLEYINETHPGTVVTVLDLFDGRESLRPLWE-----QV 53
Query: 102 EDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND------ISIVINISGRFNLKR 155
+ R V AK +I +S+GG S +D IS+ G++
Sbjct: 54 QGFREAVVPIMAKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTD 113
Query: 156 GIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAAC---------- 205
++ + + + + Y L+ A
Sbjct: 114 YLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNA 173
Query: 206 ----------------------HMICQDCRVLTIHGTKDKMVPAEDALEFDK-------- 235
+ + + ++ E+ L + +
Sbjct: 174 TVWRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTL 233
Query: 236 -FIPNHKLHIIEGADHE-FTSHQDELASLVIQFI 267
+ G H + S++ + + ++
Sbjct: 234 LARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 267
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 46.2 bits (108), Expect = 2e-06
Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 5/65 (7%)
Query: 211 DCRVLTIHGTKDKMVPAEDALEFDKFIPNH-KLHIIEGADH-EFTSHQD---ELASLVIQ 265
+ +G D + D +PN I +H +F D + + ++
Sbjct: 313 HVPIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVS 372
Query: 266 FIKAN 270
+ +
Sbjct: 373 MMGTD 377
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 45.7 bits (106), Expect = 2e-06
Identities = 9/70 (12%), Positives = 17/70 (24%), Gaps = 2/70 (2%)
Query: 202 HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHK-LHIIEGADHEFTSHQ-DEL 259
+ + + G KDK++ + I I A H
Sbjct: 240 AISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVA 299
Query: 260 ASLVIQFIKA 269
+ F +
Sbjct: 300 REALKHFAET 309
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.5 bits (101), Expect = 9e-06
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 193 LMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE- 251
+ + TD A + L ++G +D M + E K +PNH++ I++GA H
Sbjct: 132 PVAPICTDKINAANYASVKTPALIVYGDQDPMGQT--SFEHLKQLPNHRVLIMKGAGHPC 189
Query: 252 FTSHQDELASLVIQFIK 268
+ +E + ++ F++
Sbjct: 190 YLDKPEEWHTGLLDFLQ 206
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 41.0 bits (94), Expect = 8e-05
Identities = 35/265 (13%), Positives = 71/265 (26%), Gaps = 44/265 (16%)
Query: 39 LH---ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYG 95
LH T LV++ HG + + + L R +A D G+G +
Sbjct: 7 LHFAKPTARTPLVVLVHGLLGSGAD--WQPVLSHLARTQCAALTLDLPGHGTNPERHCDN 64
Query: 96 NYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINIS------- 148
+ + ++ VI ++G+S GG ++ ++ + + +
Sbjct: 65 FAEAVEMIEQTVQAHVTSEVPVI--LVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHF 122
Query: 149 ------------------GRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQ 190
+ ++ IE L Y Q + + + R
Sbjct: 123 GLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLG 182
Query: 191 ESLMDRLSTDIHAACHMICQD-----CRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHII 245
S+ L A + + + G +D +
Sbjct: 183 SSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQQLAE------SSGLSYSQV 236
Query: 246 EGADHE-FTSHQDELASLVIQFIKA 269
A H A +V I +
Sbjct: 237 AQAGHNVHHEQPQAFAKIVQAMIHS 261
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 39.5 bits (91), Expect = 2e-04
Identities = 36/264 (13%), Positives = 74/264 (28%), Gaps = 30/264 (11%)
Query: 23 RRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDR---IPMVNLAAALEREGI---- 75
+ +P++ + + + + G V + G ++ D + G+
Sbjct: 7 EYLQVPSASMGRDIKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIM 66
Query: 76 ---SAFRFDFSGNGESEGSFLYGNYRRE---AEDLRAIVQDFCAKGRVITAIIGHSKGGN 129
F S+ + Y+ E ++ A +Q A +G S G
Sbjct: 67 PVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGG 126
Query: 130 AVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRV 188
+ L+ A+ Y ++SG N L + +G + + G
Sbjct: 127 SALILAAYYPQQFPYAASLSGFLNPSESWWPTL---IGLAMNDSGGYNANSMWGPSSDPA 183
Query: 189 TQE----SLMDRL---STDIHAACH-MICQDCRVLTIHGTKDKMVPAEDALEF-----DK 235
+ + RL +T I C D I + + F
Sbjct: 184 WKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAAD 243
Query: 236 FIPNHKLHIIEGADHEFTSHQDEL 259
N + H + ++L
Sbjct: 244 GGRNGVFNFPPNGTHSWPYWNEQL 267
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 38.3 bits (87), Expect = 6e-04
Identities = 11/69 (15%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Query: 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDEL 259
D L I+ + +F + PN + GA DE+
Sbjct: 225 DYAGWLSESP--IPKLFINAEPGALTT-GRMRDFCRTWPNQTEITVAGAHFIQEDSPDEI 281
Query: 260 ASLVIQFIK 268
+ + F++
Sbjct: 282 GAAIAAFVR 290
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 37.6 bits (87), Expect = 0.001
Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 48 VIVCHGFQST-KDRIPMVNLAAALERE--GISAFRFDFSGN-GESEGSFLYGNYRREAED 103
+++ HG + + + M + +E++ GI + E + + N +
Sbjct: 8 LVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTT 67
Query: 104 LRAIV-QDFCAKGRVITAIIGHSKGGNAVLLYASKYND 140
+ I+ +D + +G S+GG + A +
Sbjct: 68 VCQILAKDPKLQQGYN--AMGFSQGGQFLRAVAQRCPS 103
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Score = 37.3 bits (86), Expect = 0.001
Identities = 25/189 (13%), Positives = 47/189 (24%), Gaps = 35/189 (18%)
Query: 120 AIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRN 179
++ G + GG Y+D+ G G Y Q + N
Sbjct: 14 SVSGLASGGYMAAQLGVAYSDV-----------FNVGFGVFAGGPYDCARNQYYTSCMYN 62
Query: 180 KKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI-- 237
G ++ I + ++ ++ G+ D V + +
Sbjct: 63 --GYPSITTPTANMKSWSGNQIASVANLG--QRKIYMWTGSSDTTVGPNVMNQLKAQLGN 118
Query: 238 ----PNHKLHIIEGADHEFTSHQDELASLVIQFIKANYQKD--------------GPTSK 279
N GA H F + + + Y + G +
Sbjct: 119 FDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDGAGAALKWIYGSLNA 178
Query: 280 RADGTIDSR 288
R GT+
Sbjct: 179 RNTGTLSGS 187
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 289 | |||
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 100.0 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.97 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.97 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.97 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.97 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.97 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.97 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.96 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.96 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.95 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.95 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.95 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.94 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.94 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.93 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.93 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.93 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.91 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.91 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.91 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.9 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.9 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.89 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.87 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.87 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.87 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.87 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.86 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.85 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.84 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.84 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.84 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.84 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.84 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.83 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.82 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.82 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.81 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.8 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.8 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.8 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.8 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.78 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.77 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.76 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.75 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.73 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.68 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.68 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.6 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.58 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.58 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.4 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.38 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.36 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.36 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.31 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.28 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.24 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 99.1 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 99.08 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.07 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.89 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.87 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.81 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.68 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.66 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.5 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.46 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.44 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.43 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.41 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.35 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 98.2 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 98.2 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 97.2 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 97.04 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.98 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 96.97 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.93 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.93 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 96.88 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 96.56 |
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=8.3e-35 Score=224.18 Aligned_cols=236 Identities=20% Similarity=0.261 Sum_probs=165.8
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~ 105 (289)
++++.||.+|+|..+++.++|+|||+||++++... |..+++.|.++||+|+++|+||||.|..+....+++.+++|+.
T Consensus 2 ~i~~~dG~~l~y~~~G~~~~~~vv~lHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~ 79 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADD--WDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVA 79 (275)
T ss_dssp EEECTTSCEEEEEEESCTTSCEEEEECCTTCCGGG--GHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred EEEecCCCEEEEEEecCCCCCeEEEECCCCCCHHH--HHHHHHHHHhCCCEEEEEecccccccccccccccccccccccc
Confidence 57889999999988888888999999999999854 8999999999999999999999999988777778899999999
Q ss_pred HHHHHHHhcCCceEEEEEeCh-hHHHHHHHHHhCCC-ccEEEEeccCCccccccc---ccccchhHh-------------
Q 022960 106 AIVQDFCAKGRVITAIIGHSK-GGNAVLLYASKYND-ISIVINISGRFNLKRGIE---GRLGLGYLQ------------- 167 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~-Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~---~~~~~~~~~------------- 167 (289)
++++.+ +.++++++|||+ ||.++..+|..+|+ |+++|++++......... .........
T Consensus 80 ~~l~~l---~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (275)
T d1a88a_ 80 ALTEAL---DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQF 156 (275)
T ss_dssp HHHHHH---TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHH
T ss_pred cccccc---cccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhhhhHHH
Confidence 999998 777899999997 66677777889999 999999986532211110 000000000
Q ss_pred --hhhhcCcccccccccccccccC-----------hhhhhhhh----ccchhhhhcccccCceEEEEEeCCCCccChhh-
Q 022960 168 --RIKQNGFIDVRNKKGKLEYRVT-----------QESLMDRL----STDIHAACHMICQDCRVLTIHGTKDKMVPAED- 229 (289)
Q Consensus 168 --~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~- 229 (289)
......+............... ........ ..+..... .++++|+++++|++|.++|.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~l~i~G~~D~~~~~~~~ 234 (275)
T d1a88a_ 157 YIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDL--KRIDVPVLVAHGTDDQVVPYADA 234 (275)
T ss_dssp HHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHH--HHCCSCEEEEEETTCSSSCSTTT
T ss_pred HHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHH--HhhccccceeecCCCCCcCHHHH
Confidence 0000111110000000000000 00000000 01111111 1468999999999999998764
Q ss_pred HHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 230 ALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
.+.+.+.++++++++++++||+++ ++++++++.|.+||+
T Consensus 235 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 274 (275)
T d1a88a_ 235 APKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp HHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHc
Confidence 566778889999999999999965 778899999999997
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-35 Score=232.50 Aligned_cols=241 Identities=18% Similarity=0.215 Sum_probs=167.3
Q ss_pred eEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc--ccchHHHH
Q 022960 24 RVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL--YGNYRREA 101 (289)
Q Consensus 24 ~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~ 101 (289)
...+.+.||.+++|... |++|+|||+||++++... |..+++.|+++||+|+++|+||||.|..+.. ..+++.++
T Consensus 13 ~~~v~~~~g~~i~y~~~--G~gp~vlllHG~~~~~~~--~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 88 (322)
T d1zd3a2 13 HGYVTVKPRVRLHFVEL--GSGPAVCLCHGFPESWYS--WRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLC 88 (322)
T ss_dssp EEEEEEETTEEEEEEEE--CCSSEEEEECCTTCCGGG--GTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGSHHHHH
T ss_pred eeEEEECCCCEEEEEEE--cCCCeEEEECCCCCCHHH--HHHHHHHHHHCCCEEEEeccccccccccccccccccccccc
Confidence 34455668999986654 567999999999999854 8999999999999999999999999987543 45678889
Q ss_pred HHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccc-------------------
Q 022960 102 EDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRL------------------- 161 (289)
Q Consensus 102 ~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~------------------- 161 (289)
+++.++++.+ +.++++++||||||.+++.+|.++|+ ++++|+++++...........
T Consensus 89 ~~i~~l~~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (322)
T d1zd3a2 89 KEMVTFLDKL---GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPG 165 (322)
T ss_dssp HHHHHHHHHH---TCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTSTT
T ss_pred hhhhhhhhcc---cccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhHHhhhccc
Confidence 9999999988 78899999999999999999999999 999999986543221110000
Q ss_pred -c-----ch---hHhhhhhcCccccc--------------c-cccccccccChhhhh---hhh------------cc---
Q 022960 162 -G-----LG---YLQRIKQNGFIDVR--------------N-KKGKLEYRVTQESLM---DRL------------ST--- 199 (289)
Q Consensus 162 -~-----~~---~~~~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~~---~~~------------~~--- 199 (289)
. .. ....+......... . ............... ..+ ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (322)
T d1zd3a2 166 VAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMER 245 (322)
T ss_dssp HHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHTTSCHHH
T ss_pred hhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhccccccccccccccc
Confidence 0 00 00000000000000 0 000000000000000 000 00
Q ss_pred --chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 200 --DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 200 --~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
.........++++|+++++|++|.+++++..+.+.+.++++++++++++||+++ +.++++++.|.+||+++.
T Consensus 246 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~FL~~~~ 320 (322)
T d1zd3a2 246 NWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDA 320 (322)
T ss_dssp HHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHT
T ss_pred ccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHhhcC
Confidence 000111112568999999999999999999999999999999999999999976 678899999999999864
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=4.5e-35 Score=225.93 Aligned_cols=236 Identities=23% Similarity=0.335 Sum_probs=158.7
Q ss_pred eeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHH
Q 022960 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRA 106 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~ 106 (289)
+...++..+..+|...|++|+|||+||++++... |..+++.|.++||+|+++|+||||.|+......+++.+++|+.+
T Consensus 5 ~~~~~~~~v~i~y~~~G~G~~ivllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~ 82 (277)
T d1brta_ 5 VGQENSTSIDLYYEDHGTGQPVVLIHGFPLSGHS--WERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNT 82 (277)
T ss_dssp EEEETTEEEEEEEEEECSSSEEEEECCTTCCGGG--GHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred EecCcCCcEEEEEEEEccCCeEEEECCCCCCHHH--HHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhhh
Confidence 3334444455446666788999999999999854 89999999999999999999999999877777788999999999
Q ss_pred HHHHHHhcCCceEEEEEeChhH-HHHHHHHHhCCC-ccEEEEeccCCcccccccc----cccchhHhhh----hhcC---
Q 022960 107 IVQDFCAKGRVITAIIGHSKGG-NAVLLYASKYND-ISIVINISGRFNLKRGIEG----RLGLGYLQRI----KQNG--- 173 (289)
Q Consensus 107 ~i~~l~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~--- 173 (289)
+++.+ +.++++++|||||| .++..++..+|+ |+++|++++.......... .........+ ....
T Consensus 83 ~l~~l---~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (277)
T d1brta_ 83 VLETL---DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAF 159 (277)
T ss_dssp HHHHH---TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHH
T ss_pred hhhcc---CcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhh
Confidence 99998 78899999999997 556666777788 9999999875432211100 0000000000 0000
Q ss_pred ----cccccccccccccccChhhhhh------------------hhccchhhhhcccccCceEEEEEeCCCCccChhh-H
Q 022960 174 ----FIDVRNKKGKLEYRVTQESLMD------------------RLSTDIHAACHMICQDCRVLTIHGTKDKMVPAED-A 230 (289)
Q Consensus 174 ----~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~ 230 (289)
+..................... ....+.... ..++++|+++++|++|.+++.+. .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~lii~g~~D~~~~~~~~~ 237 (277)
T d1brta_ 160 YTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRAD--IPRIDVPALILHGTGDRTLPIENTA 237 (277)
T ss_dssp HHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTT--GGGCCSCEEEEEETTCSSSCGGGTH
T ss_pred hhhccccccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHH--HHhcCccceeEeecCCCCcCHHHHH
Confidence 0000000000000000000000 000111111 12458999999999999998875 4
Q ss_pred HHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 231 LEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+.+.+.+++++++.++++||+++ ++++++.+.|.+||++
T Consensus 238 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 238 RVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp HHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 66778899999999999999965 7788999999999974
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=4.2e-35 Score=226.87 Aligned_cols=243 Identities=17% Similarity=0.221 Sum_probs=161.2
Q ss_pred ceeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCC-cchHHHHHHHHHcCccEEEEccccCCCCCCCccc-----
Q 022960 21 QRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDR-IPMVNLAAALEREGISAFRFDFSGNGESEGSFLY----- 94 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~----- 94 (289)
+.-+.+++ .++.++++...++.++|+|||+||++++... ..|..+++.|++ ||+|+++|+||||.|+.....
T Consensus 3 ~~~~~~~~-~~~~~~h~~~~G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~~~~~~~ 80 (281)
T d1c4xa_ 3 EIIEKRFP-SGTLASHALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPETYPGHIM 80 (281)
T ss_dssp CCEEEEEC-CTTSCEEEEEESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCSSCCSSHH
T ss_pred EEEEEEEc-cCCEEEEEEEEecCCCCEEEEECCCCCCCcHHHHHHHHHHHHhC-CCEEEEEeCCCCccccccccccccch
Confidence 33455565 3567888888887789999999999887643 236778888876 699999999999999865432
Q ss_pred cchHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc----------
Q 022960 95 GNYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL---------- 163 (289)
Q Consensus 95 ~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~---------- 163 (289)
......++|+.++++.+ +.++++++||||||.+++.+|.++|+ |+++|++++..............
T Consensus 81 ~~~~~~~~~i~~~i~~~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (281)
T d1c4xa_ 81 SWVGMRVEQILGLMNHF---GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRL 157 (281)
T ss_dssp HHHHHHHHHHHHHHHHH---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCH
T ss_pred hhHHHhhhhcccccccc---ccccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhccc
Confidence 23345567777777766 77899999999999999999999999 99999998754322111100000
Q ss_pred hhHhhhhhcCccccccccccc-----ccccC--------hhhhhhhhcc----chhhhhcccccCceEEEEEeCCCCccC
Q 022960 164 GYLQRIKQNGFIDVRNKKGKL-----EYRVT--------QESLMDRLST----DIHAACHMICQDCRVLTIHGTKDKMVP 226 (289)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~--------~~~~~~~~~~----~~~~~~~~~~~~~P~l~i~g~~D~~~~ 226 (289)
..................... ..... .......... .........++++|+|+++|++|.++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 237 (281)
T d1c4xa_ 158 TPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVP 237 (281)
T ss_dssp HHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred chhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcC
Confidence 000000000000000000000 00000 0000000000 000011112568999999999999999
Q ss_pred hhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 227 AEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
++..+.+.+.++++++++++++||+.+ ++++++++.|.+||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T d1c4xa_ 238 LDTSLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLMEHFR 280 (281)
T ss_dssp THHHHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHhC
Confidence 999999999999999999999999965 678899999999996
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=8.7e-35 Score=226.75 Aligned_cols=234 Identities=17% Similarity=0.153 Sum_probs=162.7
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc---ccchHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL---YGNYRREAEDLRA 106 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~~~~~~~d~~~ 106 (289)
.+|.+++|..++++++|+|||+||++++... ++..+.+.|.++||+|+++|+||||.|+.... ..++.++++|+.+
T Consensus 7 ~g~~~i~y~~~G~~~~p~vvl~HG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~d~~~ 85 (297)
T d1q0ra_ 7 SGDVELWSDDFGDPADPALLLVMGGNLSALG-WPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVA 85 (297)
T ss_dssp ETTEEEEEEEESCTTSCEEEEECCTTCCGGG-SCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHHHH
T ss_pred ECCEEEEEEEecCCCCCEEEEECCCCcChhH-HHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccchhhhhhcc
Confidence 4678899888887789999999999988754 23567889998999999999999999975432 3478888999999
Q ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc---------------cccchhHhhhh
Q 022960 107 IVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG---------------RLGLGYLQRIK 170 (289)
Q Consensus 107 ~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 170 (289)
+++.+ +.++++++||||||.+++.+|..+|+ |+++|++++.......... .....+...+.
T Consensus 86 ll~~l---~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (297)
T d1q0ra_ 86 VLDGW---GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALA 162 (297)
T ss_dssp HHHHT---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHH
T ss_pred ccccc---cccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhhhHHHHHHHH
Confidence 99988 78899999999999999999999999 9999999875432211000 00000000000
Q ss_pred h--cCccc----c------cccccccccccChhhh-------hh----------------hhccchhhhhcccccCceEE
Q 022960 171 Q--NGFID----V------RNKKGKLEYRVTQESL-------MD----------------RLSTDIHAACHMICQDCRVL 215 (289)
Q Consensus 171 ~--~~~~~----~------~~~~~~~~~~~~~~~~-------~~----------------~~~~~~~~~~~~~~~~~P~l 215 (289)
. ..... . ................ .. ....+... ...++++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~Pvl 240 (297)
T d1q0ra_ 163 LMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAA--ELREVTVPTL 240 (297)
T ss_dssp HHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGG--GGGGCCSCEE
T ss_pred HhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchh--hhhccCCceE
Confidence 0 00000 0 0000000000000000 00 00011111 1225689999
Q ss_pred EEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 216 TIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 216 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+|+|++|.++|++.++.+.+.+|++++++++++||+++ +.++++++.|.+||++
T Consensus 241 vi~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 241 VIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp EEEETTCSSSCTTHHHHHHHTSTTEEEEEETTCCSSCCGGGHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCcchhhCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999976 6678899999999975
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=3.8e-35 Score=226.06 Aligned_cols=235 Identities=17% Similarity=0.273 Sum_probs=159.6
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~ 105 (289)
.+++.||.+++|... |++|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+....++...++|+.
T Consensus 2 ~~~t~dG~~l~y~~~--G~g~~ivlvHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~ 77 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDW--GQGRPVVFIHGWPLNGD--AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLN 77 (274)
T ss_dssp EEECTTSCEEEEEEE--CSSSEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred eEECcCCCEEEEEEE--CCCCeEEEECCCCCCHH--HHHHHHHHHHHCCCEEEEEeCCCCcccccccccccchhhHHHHH
Confidence 367789999986544 56789999999999985 48999999999999999999999999998777778888899999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCcccccccc---cccchhHhhhh----------
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKRGIEG---RLGLGYLQRIK---------- 170 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~---------- 170 (289)
++++.+ +.++++++||||||.+++.+++.+ |+ |++++++++.......... .........+.
T Consensus 78 ~~l~~l---~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (274)
T d1a8qa_ 78 DLLTDL---DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQF 154 (274)
T ss_dssp HHHHHT---TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh---hhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhhHHH
Confidence 999888 778999999999999998876665 77 9999999864432211110 00000000000
Q ss_pred -hcCcccccccc--cccccccChhh------------hhhh----hccchhhhhcccccCceEEEEEeCCCCccChhhH-
Q 022960 171 -QNGFIDVRNKK--GKLEYRVTQES------------LMDR----LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDA- 230 (289)
Q Consensus 171 -~~~~~~~~~~~--~~~~~~~~~~~------------~~~~----~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~- 230 (289)
........... ........... .... ...+.... ..++++|+++++|++|.++|.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~Pvlii~G~~D~~~~~~~~~ 232 (274)
T d1a8qa_ 155 WKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTED--LKKFDIPTLVVHGDDDQVVPIDATG 232 (274)
T ss_dssp HHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHH--HTTCCSCEEEEEETTCSSSCGGGTH
T ss_pred hhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHH--HHhccceeeeeccCCCCCcCHHHHH
Confidence 00000000000 00000000000 0000 00011111 124689999999999999998754
Q ss_pred HHHHhhCCCcEEEEEcCCCcccc---cCchHHHHHHHHHHHh
Q 022960 231 LEFDKFIPNHKLHIIEGADHEFT---SHQDELASLVIQFIKA 269 (289)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~i~~fl~~ 269 (289)
+.+.+.++++++++++++||+.+ ++++++++.|.+||++
T Consensus 233 ~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 233 RKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 66778899999999999999854 3467899999999964
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=2.9e-35 Score=226.04 Aligned_cols=235 Identities=18% Similarity=0.193 Sum_probs=159.6
Q ss_pred CCCCceEEEEEeecCCCcEEEEEcCCCCCCCC-cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHH
Q 022960 29 NSHGEKLVGILHETGSKQLVIVCHGFQSTKDR-IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI 107 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~ 107 (289)
+.||.+++|. ..|++|+|||+||++++..+ ..|..+.+.|++ ||+|+++|+||||.|+.+....+++.+++++.++
T Consensus 8 ~~dg~~l~y~--~~G~g~~vvllHG~~~~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 84 (268)
T d1j1ia_ 8 NAGGVETRYL--EAGKGQPVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDF 84 (268)
T ss_dssp EETTEEEEEE--EECCSSEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHH
T ss_pred EECCEEEEEE--EEcCCCeEEEECCCCCCccHHHHHHHHHHHHhc-CCEEEEEcccccccccCCccccccccccccchhh
Confidence 3589998854 55567899999999987653 236677888865 7999999999999999877777888899999999
Q ss_pred HHHHHhcCC-ceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc---ccc----cchhHhhhhhcCccccc
Q 022960 108 VQDFCAKGR-VITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE---GRL----GLGYLQRIKQNGFIDVR 178 (289)
Q Consensus 108 i~~l~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~ 178 (289)
++.+ +. ++++++|||+||.+++.+|.++|+ |+++|++++......... ... .................
T Consensus 85 i~~l---~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (268)
T d1j1ia_ 85 IKAM---NFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGF 161 (268)
T ss_dssp HHHS---CCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHHHHHHSCTTC
T ss_pred HHHh---hhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhhhhhhhhhhhhHHHHHHHhhhhh
Confidence 9877 55 468999999999999999999999 999999987533221110 000 00000000000000000
Q ss_pred ccccc---cccc--c---Chhhhhhhh------ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEE
Q 022960 179 NKKGK---LEYR--V---TQESLMDRL------STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHI 244 (289)
Q Consensus 179 ~~~~~---~~~~--~---~~~~~~~~~------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 244 (289)
..... ..+. . ......... ...........++++|+++++|++|.++|++.++.+.+.++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 241 (268)
T d1j1ia_ 162 KIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYI 241 (268)
T ss_dssp CCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTEEEEE
T ss_pred hhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 00000 0000 0 000000000 00000001112468999999999999999999999999999999999
Q ss_pred EcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 245 IEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 245 ~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
++++||+++ ++++++++.|.+||++
T Consensus 242 ~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 242 IPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp ESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred ECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 999999965 6788999999999975
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=5e-35 Score=227.32 Aligned_cols=233 Identities=14% Similarity=0.119 Sum_probs=164.9
Q ss_pred CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHH
Q 022960 30 SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQ 109 (289)
Q Consensus 30 ~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~ 109 (289)
.+|.+++|..++++++|+|||+||++++.. .|..+++.|++ ||+|+++|+||||.|+.+....+.+++++|+.++++
T Consensus 14 ~~g~~i~y~~~G~~~~p~lvllHG~~~~~~--~~~~~~~~L~~-~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~l~~~l~ 90 (291)
T d1bn7a_ 14 VLGERMHYVDVGPRDGTPVLFLHGNPTSSY--LWRNIIPHVAP-SHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIE 90 (291)
T ss_dssp ETTEEEEEEEESCSSSSCEEEECCTTCCGG--GGTTTHHHHTT-TSCEEEECCTTSTTSCCCSCCCCHHHHHHHHHHHHH
T ss_pred ECCEEEEEEEeCCCCCCeEEEECCCCCCHH--HHHHHHHHHhc-CCEEEEEeCCCCccccccccccchhHHHHHHhhhhh
Confidence 478999988888778899999999999885 48899999965 799999999999999887777788999999999999
Q ss_pred HHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc-cc---------chhHhhhhhcC-----
Q 022960 110 DFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR-LG---------LGYLQRIKQNG----- 173 (289)
Q Consensus 110 ~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~----- 173 (289)
.+ +.++++++||||||.+++.++.++|+ +++++++++........... .. ...........
T Consensus 91 ~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
T d1bn7a_ 91 AL---GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIE 167 (291)
T ss_dssp HT---TCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHHHHHTTSCHHHH
T ss_pred hh---ccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhHHHhhhhhhhhHH
Confidence 88 78899999999999999999999999 99999987654322111000 00 00000000000
Q ss_pred ------cccccccc------cccccccChhhhhhh---hc------------cchhhhhcccccCceEEEEEeCCCCccC
Q 022960 174 ------FIDVRNKK------GKLEYRVTQESLMDR---LS------------TDIHAACHMICQDCRVLTIHGTKDKMVP 226 (289)
Q Consensus 174 ------~~~~~~~~------~~~~~~~~~~~~~~~---~~------------~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 226 (289)
........ ............... .. ...... ...+++|+++++|++|.++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~P~lii~G~~D~~~~ 245 (291)
T d1bn7a_ 168 GVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNW--LHQSPVPKLLFWGTPGVLIP 245 (291)
T ss_dssp THHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHH--HHHCCSCEEEEEEEECSSSC
T ss_pred hhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhh--hhcCCCCEEEEEeCCCCCcC
Confidence 00000000 000000000000000 00 000001 12468999999999999999
Q ss_pred hhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 227 AEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
++..+.+.+.+++++++.++++||+++ ++|+++++.|.+||+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 246 PAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999976 56788999999999753
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=4.6e-35 Score=225.30 Aligned_cols=237 Identities=17% Similarity=0.182 Sum_probs=158.3
Q ss_pred eeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCc-chHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHH
Q 022960 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRI-PMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDL 104 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~ 104 (289)
+.+.+|.+++|. ..|++|+|||+||++++...+ .|..+.+.|++ ||+|+++|+||||.|..+. .....+..++++
T Consensus 7 ~i~~~G~~~~Y~--~~G~G~pvvllHG~~~~~~~~~~~~~~~~~l~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~ 83 (271)
T d1uk8a_ 7 SILAAGVLTNYH--DVGEGQPVILIHGSGPGVSAYANWRLTIPALSK-FYRVIAPDMVGFGFTDRPENYNYSKDSWVDHI 83 (271)
T ss_dssp EEEETTEEEEEE--EECCSSEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSCCCTTCCCCHHHHHHHH
T ss_pred EEEECCEEEEEE--EEeeCCeEEEECCCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCCCCCccccccccccccccchhh
Confidence 345679888854 456678999999999876542 24556777764 7999999999999998654 344667778888
Q ss_pred HHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc---cc----cchhHhhhhhc-Ccc
Q 022960 105 RAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG---RL----GLGYLQRIKQN-GFI 175 (289)
Q Consensus 105 ~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~---~~----~~~~~~~~~~~-~~~ 175 (289)
..+++.+ +.++++|+||||||.+++.+|.++|+ ++++|++++.......... .. ........... ...
T Consensus 84 ~~~~~~l---~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (271)
T d1uk8a_ 84 IGIMDAL---EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYD 160 (271)
T ss_dssp HHHHHHT---TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHCSC
T ss_pred hhhhhhh---cCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhhccchhHHHHHHHHHHhhh
Confidence 8888887 78899999999999999999999999 9999998875432211100 00 00000000000 000
Q ss_pred ccccccc--c-----cccccChhhhhhhhcc--------chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc
Q 022960 176 DVRNKKG--K-----LEYRVTQESLMDRLST--------DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH 240 (289)
Q Consensus 176 ~~~~~~~--~-----~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 240 (289)
....... . .........+...... .........++++|+|+++|++|.++|.+.++.+.+.++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~ 240 (271)
T d1uk8a_ 161 RSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRA 240 (271)
T ss_dssp GGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTTE
T ss_pred cccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCCCcCHHHHHHHHHhCCCC
Confidence 0000000 0 0000000000000000 00001111246899999999999999999999999999999
Q ss_pred EEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 241 KLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 241 ~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
++++++++||+++ ++++++++.|.+||++
T Consensus 241 ~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 241 QLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp EEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 9999999999965 7788999999999986
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=1.5e-34 Score=223.32 Aligned_cols=239 Identities=18% Similarity=0.279 Sum_probs=158.3
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~ 105 (289)
++.+.++..+..+|...|++|+|||+||++++.. .|..+++.|.+.||+|+++|+||||.|+......+++.+++|+.
T Consensus 4 ~~~~~~~~~v~i~y~~~G~g~~illlHG~~~~~~--~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~ 81 (279)
T d1hkha_ 4 TVGNENSTPIELYYEDQGSGQPVVLIHGYPLDGH--SWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLH 81 (279)
T ss_dssp EEEEETTEEEEEEEEEESSSEEEEEECCTTCCGG--GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred EEecCCCCeEEEEEEEEccCCeEEEECCCCCCHH--HHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhh
Confidence 3434444444444556677899999999999885 48999999988899999999999999988777778899999999
Q ss_pred HHHHHHHhcCCceEEEEEeChhH-HHHHHHHHhCCC-ccEEEEeccCCccccccc---ccccchhHhhhhh---------
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGG-NAVLLYASKYND-ISIVINISGRFNLKRGIE---GRLGLGYLQRIKQ--------- 171 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~--------- 171 (289)
++++.+ +.++++|+|||||| .++..++..+|+ |.+++++++......... ..........+..
T Consensus 82 ~~i~~l---~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (279)
T d1hkha_ 82 TVLETL---DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAW 158 (279)
T ss_dssp HHHHHH---TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHH
T ss_pred hhhhhc---CcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhh
Confidence 999998 77899999999996 556666777788 999999986543221110 0000000000000
Q ss_pred --cCcccccccccccccccChhhh------------------hhhhccchhhhhc-ccccCceEEEEEeCCCCccChh-h
Q 022960 172 --NGFIDVRNKKGKLEYRVTQESL------------------MDRLSTDIHAACH-MICQDCRVLTIHGTKDKMVPAE-D 229 (289)
Q Consensus 172 --~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~-~ 229 (289)
...................... ......+...... ...+++|+++++|++|.++|.+ .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 238 (279)
T d1hkha_ 159 FTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDAT 238 (279)
T ss_dssp HHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTT
T ss_pred hhhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHH
Confidence 0000000000000000000000 0000011111111 1135899999999999999875 5
Q ss_pred HHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 230 ALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
.+.+.+.+|++++++++++||+++ ++++++++.|.+||++
T Consensus 239 ~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 239 ARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp HHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 678888899999999999999965 7788999999999974
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=8.3e-34 Score=220.90 Aligned_cols=239 Identities=18% Similarity=0.236 Sum_probs=159.6
Q ss_pred eeeEEeeCCCCceEEEEEeecC-----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccC-CCCCCCcccc
Q 022960 22 RRRVVIPNSHGEKLVGILHETG-----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGN-GESEGSFLYG 95 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~-----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-G~s~~~~~~~ 95 (289)
..+..++..||..+++|.+.|. ++++||++||++++.. .|..+++.|+++||+|+++|+||| |.|.+.....
T Consensus 4 ~~~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~--~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~ 81 (302)
T d1thta_ 4 TIAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD--HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEF 81 (302)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG--GGHHHHHHHHTTTCCEEEECCCBCC--------CC
T ss_pred eeeeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHH--HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCC
Confidence 3466778889999999877542 4578999999999885 489999999999999999999998 8888877777
Q ss_pred chHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcc
Q 022960 96 NYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFI 175 (289)
Q Consensus 96 ~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (289)
++..+.+|+.++++++...+.++++|+||||||.+++.+|.. ++++++|+.+|...........+....... ...
T Consensus 82 ~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~-~~v~~li~~~g~~~~~~~~~~~~~~~~~~~----~~~ 156 (302)
T d1thta_ 82 TMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-LELSFLITAVGVVNLRDTLEKALGFDYLSL----PID 156 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-SCCSEEEEESCCSCHHHHHHHHHSSCGGGS----CGG
T ss_pred CHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc-cccceeEeecccccHHHHHHHHHhhccchh----hhh
Confidence 888899999999999988888899999999999999987753 449999999987665432222111111000 000
Q ss_pred cccccccccccccChhhhhhh-hccch----hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC--CcEEEEEcCC
Q 022960 176 DVRNKKGKLEYRVTQESLMDR-LSTDI----HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP--NHKLHIIEGA 248 (289)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 248 (289)
.................+... +.... .......++++|+|+++|++|.+||++.++.+++.++ +++++.++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~ 236 (302)
T d1thta_ 157 ELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGS 236 (302)
T ss_dssp GCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTCCEEEEEETTC
T ss_pred hccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhCCCCCceEEEecCC
Confidence 000000000000001111111 00000 0111122569999999999999999999999999886 5899999999
Q ss_pred CcccccCch---HHHHHHHHHH
Q 022960 249 DHEFTSHQD---ELASLVIQFI 267 (289)
Q Consensus 249 gH~~~~~~~---~~~~~i~~fl 267 (289)
+|.+.+++. .+.+.+..+.
T Consensus 237 ~H~l~e~~~~~~~~~~~~~~~~ 258 (302)
T d1thta_ 237 SHDLGENLVVLRNFYQSVTKAA 258 (302)
T ss_dssp CSCTTSSHHHHHHHHHHHHHHH
T ss_pred CcccccChHHHHHHHHHHHHHH
Confidence 999876653 2344444443
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=1.6e-33 Score=216.77 Aligned_cols=234 Identities=22% Similarity=0.296 Sum_probs=159.6
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~ 105 (289)
+|.+.||.+++|... |++|+|||+||++++... |..+++.|.++||+|+++|+||||.|+.+....++..+++|+.
T Consensus 2 ~f~~~dG~~i~y~~~--G~g~pvvllHG~~~~~~~--~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 77 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDW--GSGQPIVFSHGWPLNADS--WESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLA 77 (273)
T ss_dssp EEECTTSCEEEEEEE--SCSSEEEEECCTTCCGGG--GHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred EEEeeCCcEEEEEEE--CCCCeEEEECCCCCCHHH--HHHHHHHHHhCCCEEEEEechhcCccccccccccccchHHHHH
Confidence 577889999986544 567889999999999854 8999999999999999999999999988777778899999999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHH-HHhCCC-ccEEEEeccCCcccccccc---cccchh---------------
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLY-ASKYND-ISIVINISGRFNLKRGIEG---RLGLGY--------------- 165 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~-a~~~p~-v~~~v~~~~~~~~~~~~~~---~~~~~~--------------- 165 (289)
++++.+ +.++.+++|||+||.+++.+ +...|+ |++++++++.......... ......
T Consensus 78 ~~l~~l---~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T d1a8sa_ 78 QLIEHL---DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQL 154 (273)
T ss_dssp HHHHHT---TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhc---CccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHHHHHH
Confidence 999988 77789999999988766555 455677 9999999865432211100 000000
Q ss_pred HhhhhhcCcccccccccccccccCh-----------hhhh----hhhccchhhhhcccccCceEEEEEeCCCCccChhhH
Q 022960 166 LQRIKQNGFIDVRNKKGKLEYRVTQ-----------ESLM----DRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDA 230 (289)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~----~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 230 (289)
...+....+................ .... .....+..... .++++|+++++|++|.++|.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~Pvlii~g~~D~~~~~~~~ 232 (273)
T d1a8sa_ 155 YKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDL--KKIDVPTLVVHGDADQVVPIEAS 232 (273)
T ss_dssp HHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHH--HTCCSCEEEEEETTCSSSCSTTT
T ss_pred HHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHH--HhhccceEEEecCCCCCCCHHHH
Confidence 0011111110000000000000000 0000 00001111111 24589999999999999998887
Q ss_pred HHHHh-hCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHH
Q 022960 231 LEFDK-FIPNHKLHIIEGADHEFT-SHQDELASLVIQFIK 268 (289)
Q Consensus 231 ~~~~~-~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 268 (289)
+.+.+ ..+++++++++++||+++ ++++++++.|.+||+
T Consensus 233 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 233 GIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 77654 468999999999999965 778899999999996
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=4.8e-34 Score=221.04 Aligned_cols=231 Identities=17% Similarity=0.208 Sum_probs=154.3
Q ss_pred CceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHH---HHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHH
Q 022960 32 GEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLA---AALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAI 107 (289)
Q Consensus 32 g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~---~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~ 107 (289)
+.+++ |...|++|+|||+||++.+... |..+. ..+.++||+|+++|+||||.|..... .......++|+.++
T Consensus 19 ~~~i~--y~~~G~G~~ivllHG~~~~~~~--~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~l 94 (283)
T d2rhwa1 19 DFNIH--YNEAGNGETVIMLHGGGPGAGG--WSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (283)
T ss_dssp EEEEE--EEEECCSSEEEEECCCSTTCCH--HHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHH
T ss_pred CEEEE--EEEEcCCCeEEEECCCCCChhH--HHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhcccc
Confidence 34565 4556678999999999998864 55443 34556799999999999999987553 34455677899999
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc---hhHhhhhhcCcc-------c
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL---GYLQRIKQNGFI-------D 176 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~ 176 (289)
++.+ +.++++++|||+||.+++.+|.++|+ |+++|++++.............. ............ .
T Consensus 95 i~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (283)
T d2rhwa1 95 MDAL---DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQV 171 (283)
T ss_dssp HHHH---TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred cccc---cccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHH
Confidence 9988 78899999999999999999999999 99999998754322111110000 000000000000 0
Q ss_pred cccccccccc----------ccChhhhhhhhc-------cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC
Q 022960 177 VRNKKGKLEY----------RVTQESLMDRLS-------TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN 239 (289)
Q Consensus 177 ~~~~~~~~~~----------~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 239 (289)
.......... ............ ..........++++|+++++|++|.++|++.++.+.+.+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 251 (283)
T d2rhwa1 172 FLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDD 251 (283)
T ss_dssp HCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSS
T ss_pred hhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHHhCCC
Confidence 0000000000 000000000000 00001111224689999999999999999999999999999
Q ss_pred cEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 240 HKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 240 ~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+++++++++||+++ ++++++++.|.+||++
T Consensus 252 ~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 252 ARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp EEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 99999999999965 6788999999999975
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=1.2e-34 Score=224.61 Aligned_cols=238 Identities=19% Similarity=0.228 Sum_probs=158.8
Q ss_pred CCCCceEEEEEeecC-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHH
Q 022960 29 NSHGEKLVGILHETG-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRA 106 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~ 106 (289)
..+|.+++|..++.+ .+|+||++||++++... |......+.++||+|+++|+||||.|+.+. ...+++..++|+.+
T Consensus 8 ~~~g~~i~y~~~g~~~~~~~iv~lHG~~g~~~~--~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ 85 (290)
T d1mtza_ 8 KVNGIYIYYKLCKAPEEKAKLMTMHGGPGMSHD--YLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEA 85 (290)
T ss_dssp EETTEEEEEEEECCSSCSEEEEEECCTTTCCSG--GGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHHHH
T ss_pred EECCEEEEEEEcCCCCCCCeEEEECCCCCchHH--HHHHHHHHHHCCCEEEEEeCCCCccccccccccccccchhhhhhh
Confidence 358999998777654 67899999999887754 555566677779999999999999998654 35577888999999
Q ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc------cccchhH---hhhhh-cCcc
Q 022960 107 IVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG------RLGLGYL---QRIKQ-NGFI 175 (289)
Q Consensus 107 ~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~------~~~~~~~---~~~~~-~~~~ 175 (289)
+++++. +.++++++||||||.+++.+|.++|+ |+++|++++.......... ....... ..... ..+.
T Consensus 86 ll~~l~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (290)
T d1mtza_ 86 LRSKLF--GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYE 163 (290)
T ss_dssp HHHHHH--TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCTT
T ss_pred hhcccc--cccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhHHHHHHHHHhhhhcccc
Confidence 998874 45689999999999999999999999 9999999876533211100 0000000 00000 0000
Q ss_pred cc---------cccccccccccChhhh-----------hhhhc-----------cchhhhhcccccCceEEEEEeCCCCc
Q 022960 176 DV---------RNKKGKLEYRVTQESL-----------MDRLS-----------TDIHAACHMICQDCRVLTIHGTKDKM 224 (289)
Q Consensus 176 ~~---------~~~~~~~~~~~~~~~~-----------~~~~~-----------~~~~~~~~~~~~~~P~l~i~g~~D~~ 224 (289)
.. ................ ..... ..........++++|+++++|++|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~ 243 (290)
T d1mtza_ 164 NPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEV 243 (290)
T ss_dssp CHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEETTCSS
T ss_pred chhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhcccceEEEEEeCCCCC
Confidence 00 0000000000000000 00000 00000111124689999999999987
Q ss_pred cChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 225 VPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
+| +.++.+.+.++++++++++++||+++ ++++++++.|.+||++++
T Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h~ 290 (290)
T d1mtza_ 244 TP-NVARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLSDFILKHL 290 (290)
T ss_dssp CH-HHHHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTCC
T ss_pred CH-HHHHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHHHhC
Confidence 64 67888999999999999999999965 778899999999999864
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-34 Score=213.14 Aligned_cols=195 Identities=21% Similarity=0.255 Sum_probs=152.0
Q ss_pred cceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHH--HHHHHHHcCccEEEEccccCCCCCCCccc
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVN--LAAALEREGISAFRFDFSGNGESEGSFLY 94 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~--~~~~l~~~G~~v~~~d~~G~G~s~~~~~~ 94 (289)
++.++.++. .+|.+++|+...++ .+++|||+||++++... |.. .++.|+++||+|+++|+||||.|......
T Consensus 4 ~~~~e~~i~-v~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~~--w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~ 80 (208)
T d1imja_ 4 VEQREGTIQ-VQGQALFFREALPGSGQARFSVLLLHGIRFSSET--WQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAP 80 (208)
T ss_dssp EEECCCCEE-ETTEEECEEEEECSSSCCSCEEEECCCTTCCHHH--HHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCS
T ss_pred CCceEEEEE-ECCEEEEEEEecCCCCCCCCeEEEECCCCCChhH--HhhhHHHHHHHHcCCeEEEeecccccCCCCCCcc
Confidence 445555555 47999998776653 56799999999998854 665 46889999999999999999999865432
Q ss_pred c--chHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhh
Q 022960 95 G--NYRREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQ 171 (289)
Q Consensus 95 ~--~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
. ......+++.++++.+ +.++++|+||||||.+++.++.++|+ ++++|+++|......
T Consensus 81 ~~~~~~~~~~~l~~~~~~l---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~~---------------- 141 (208)
T d1imja_ 81 APIGELAPGSFLAAVVDAL---ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI---------------- 141 (208)
T ss_dssp SCTTSCCCTHHHHHHHHHH---TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS----------------
T ss_pred cccchhhhhhhhhhccccc---ccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccccc----------------
Confidence 2 2234457778888877 77889999999999999999999999 999999987421100
Q ss_pred cCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcc
Q 022960 172 NGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE 251 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 251 (289)
... ...++++|+|+++|++|.++|.+. +..+.+++.++.+++++||.
T Consensus 142 -----------------~~~--------------~~~~i~~P~Lii~G~~D~~~~~~~--~~~~~~~~~~~~~i~~~gH~ 188 (208)
T d1imja_ 142 -----------------NAA--------------NYASVKTPALIVYGDQDPMGQTSF--EHLKQLPNHRVLIMKGAGHP 188 (208)
T ss_dssp -----------------CHH--------------HHHTCCSCEEEEEETTCHHHHHHH--HHHTTSSSEEEEEETTCCTT
T ss_pred -----------------ccc--------------cccccccccccccCCcCcCCcHHH--HHHHhCCCCeEEEECCCCCc
Confidence 000 011358999999999999987543 45677899999999999999
Q ss_pred c-ccCchHHHHHHHHHHHh
Q 022960 252 F-TSHQDELASLVIQFIKA 269 (289)
Q Consensus 252 ~-~~~~~~~~~~i~~fl~~ 269 (289)
. .+.++++.+.+.+||++
T Consensus 189 ~~~~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 189 CYLDKPEEWHTGLLDFLQG 207 (208)
T ss_dssp HHHHCHHHHHHHHHHHHHT
T ss_pred hhhhCHHHHHHHHHHHHhc
Confidence 5 47788999999999985
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=1.7e-33 Score=221.19 Aligned_cols=227 Identities=15% Similarity=0.053 Sum_probs=152.5
Q ss_pred ceeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchH
Q 022960 21 QRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYR 98 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~ 98 (289)
+.++..+...||.+++|..++.+++++|||+||++++... |......+ ..||+|+++|+||||.|+.+. ...++.
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G~~~g~pvvllHG~~g~~~~--~~~~~~~l-~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~ 86 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCN--DKMRRFHD-PAKYRIVLFDQRGSGRSTPHADLVDNTTW 86 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEECTTSEEEEEECSTTTTCCC--GGGGGGSC-TTTEEEEEECCTTSTTSBSTTCCTTCCHH
T ss_pred CCCCCEEEeCCCcEEEEEEecCCCCCEEEEECCCCCCccc--hHHHhHHh-hcCCEEEEEeccccCCCCccccccchhHH
Confidence 3467788888999999888887788999999999987754 44443333 457999999999999998654 335678
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc-------ccchhHhhhh
Q 022960 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR-------LGLGYLQRIK 170 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~ 170 (289)
+.++|+.++++++ +.++++|+||||||.+++.+|.++|+ |++++++++........... ........+.
T Consensus 87 ~~~~dl~~~~~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (313)
T d1azwa_ 87 DLVADIERLRTHL---GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYL 163 (313)
T ss_dssp HHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHhh---ccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchhhhHHHHHHH
Confidence 8899999999998 88899999999999999999999999 99999998765432211110 0000000000
Q ss_pred hcCcccc------------cccc----------------cccccccChhh--------hhh---hhcc------------
Q 022960 171 QNGFIDV------------RNKK----------------GKLEYRVTQES--------LMD---RLST------------ 199 (289)
Q Consensus 171 ~~~~~~~------------~~~~----------------~~~~~~~~~~~--------~~~---~~~~------------ 199 (289)
....... .... ........... ... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
T d1azwa_ 164 NAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVE 243 (313)
T ss_dssp HTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSST
T ss_pred HhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhccccccc
Confidence 0000000 0000 00000000000 000 0000
Q ss_pred chhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc
Q 022960 200 DIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT 253 (289)
Q Consensus 200 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 253 (289)
..........+++|+++++|++|.++|++.++.+.+.+|++++++++++||+.+
T Consensus 244 ~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~p~a~~~~i~~aGH~~~ 297 (313)
T d1azwa_ 244 DQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPKAQLQISPASGHSAF 297 (313)
T ss_dssp THHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSSTT
T ss_pred hhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCC
Confidence 000011112357899999999999999999999999999999999999999865
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=4.2e-33 Score=213.93 Aligned_cols=235 Identities=20% Similarity=0.292 Sum_probs=160.0
Q ss_pred EeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHH
Q 022960 26 VIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLR 105 (289)
Q Consensus 26 ~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~ 105 (289)
+|.+.||.+++|.. .|++|+|||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+....+++.+++|+.
T Consensus 2 ~f~~~dG~~l~y~~--~G~g~~vv~lHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 77 (271)
T d1va4a_ 2 TFVAKDGTQIYFKD--WGSGKPVLFSHGWLLDAD--MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIA 77 (271)
T ss_dssp EEECTTSCEEEEEE--ESSSSEEEEECCTTCCGG--GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred EEEeECCeEEEEEE--EcCCCeEEEECCCCCCHH--HHHHHHHHHHhCCCEEEEEeccccccccccccccccccccccce
Confidence 46678999998654 456788999999999885 48999999999999999999999999998777778899999999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHH-HHHhCCC-ccEEEEeccCCccccccc---ccccch----hHhhhhh-----
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLL-YASKYND-ISIVINISGRFNLKRGIE---GRLGLG----YLQRIKQ----- 171 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~-~a~~~p~-v~~~v~~~~~~~~~~~~~---~~~~~~----~~~~~~~----- 171 (289)
++++.+ +.++++++|||+||.+++. ++..+|+ +.+++++++......... ...... +......
T Consensus 78 ~~~~~~---~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T d1va4a_ 78 QLIEHL---DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQF 154 (271)
T ss_dssp HHHHHH---TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHHHHHH
T ss_pred eeeeec---CCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhhhhhh
Confidence 999988 7889999999999876655 5666788 999999887543221111 001000 0000000
Q ss_pred --cCcccccc-cccccccc------------cChhhhhhh----hccchhhhhcccccCceEEEEEeCCCCccChhhHHH
Q 022960 172 --NGFIDVRN-KKGKLEYR------------VTQESLMDR----LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE 232 (289)
Q Consensus 172 --~~~~~~~~-~~~~~~~~------------~~~~~~~~~----~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 232 (289)
........ ........ ......... ...+...... ++++|+++++|++|.++|.+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~Pvl~i~g~~D~~~~~~~~~~ 232 (271)
T d1va4a_ 155 ISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMA--KIDVPTLVIHGDGDQIVPFETTGK 232 (271)
T ss_dssp HHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHH--HCCSCEEEEEETTCSSSCGGGTHH
T ss_pred hhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhh--hcccceeecccCCCCCCCHHHHHH
Confidence 00000000 00000000 000000000 0111111112 458999999999999999888766
Q ss_pred H-HhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHh
Q 022960 233 F-DKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKA 269 (289)
Q Consensus 233 ~-~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 269 (289)
+ .+.++++++++++++||+++ ++++++++.|.+||++
T Consensus 233 ~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 233 VAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 6 45678999999999999965 6788999999999964
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=6.6e-33 Score=217.49 Aligned_cols=236 Identities=11% Similarity=0.069 Sum_probs=161.2
Q ss_pred CCCCceEEEEEeecC-CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc--cccchHHHHHHHH
Q 022960 29 NSHGEKLVGILHETG-SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF--LYGNYRREAEDLR 105 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~-~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~ 105 (289)
..+|.++++.-.+++ ..|+|||+||++++.. .|..+...|.++||+|+++|+||||.|..+. ..+++...++|+.
T Consensus 30 ~~~g~~~~y~~~G~~~~~p~llllHG~~~~~~--~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~l~ 107 (310)
T d1b6ga_ 30 GYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSY--LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLL 107 (310)
T ss_dssp TCTTCEEEEEEEECTTCSCEEEECCCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHH
T ss_pred CCCCEEEEEEEecCCCCCCEEEEECCCCCchH--HHHHHHHHhhccCceEEEeeecCccccccccccccccccccccchh
Confidence 458999997767665 4678899999999985 4889999999999999999999999998653 3457888999999
Q ss_pred HHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc----ccc---c-hhH--hhhh-hcC
Q 022960 106 AIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG----RLG---L-GYL--QRIK-QNG 173 (289)
Q Consensus 106 ~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~----~~~---~-~~~--~~~~-~~~ 173 (289)
++++.+ +.++++|+||||||.+++.+|.++|+ |+++|++++.......... ... . ... .... ...
T Consensus 108 ~~l~~l---~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (310)
T d1b6ga_ 108 ALIERL---DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSD 184 (310)
T ss_dssp HHHHHH---TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSCSS
T ss_pred hhhhhc---cccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhhhhhhhccchh
Confidence 999988 88899999999999999999999999 9999999876432211000 000 0 000 0000 000
Q ss_pred cc----------ccc--------ccccccccccChhhhhhhhc-cc--h------hhhhcccccCceEEEEEeCCCCccC
Q 022960 174 FI----------DVR--------NKKGKLEYRVTQESLMDRLS-TD--I------HAACHMICQDCRVLTIHGTKDKMVP 226 (289)
Q Consensus 174 ~~----------~~~--------~~~~~~~~~~~~~~~~~~~~-~~--~------~~~~~~~~~~~P~l~i~g~~D~~~~ 226 (289)
.. ... ..............+..... .. . ........+++|+++++|++|.+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~ 264 (310)
T d1b6ga_ 185 LRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLG 264 (310)
T ss_dssp CCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS
T ss_pred hhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEEeCCCCCCC
Confidence 00 000 00000000000000000000 00 0 0000112458999999999999999
Q ss_pred hhhHHHHHhhCCCc-EEEEEcCCCcccccC-chHHHHHHHHHHHh
Q 022960 227 AEDALEFDKFIPNH-KLHIIEGADHEFTSH-QDELASLVIQFIKA 269 (289)
Q Consensus 227 ~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~-~~~~~~~i~~fl~~ 269 (289)
++..+.+.+.+++. +++.++++||+++++ ++.+++.|.+||++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 265 PDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp HHHHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 99999999999885 789999999997754 56788899999975
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=7.4e-33 Score=215.10 Aligned_cols=237 Identities=15% Similarity=0.141 Sum_probs=155.5
Q ss_pred eeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc----cccch
Q 022960 22 RRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF----LYGNY 97 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~----~~~~~ 97 (289)
.+..++.. +|.+++|.. .|++|+|||+||++++.. .|..+++.|++ +|+|+++|+||||.|.... ...++
T Consensus 8 ~~~~~~~~-~~~~l~y~~--~G~gp~vv~lHG~~~~~~--~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~~~~~~~ 81 (293)
T d1ehya_ 8 FKHYEVQL-PDVKIHYVR--EGAGPTLLLLHGWPGFWW--EWSKVIGPLAE-HYDVIVPDLRGFGDSEKPDLNDLSKYSL 81 (293)
T ss_dssp SCEEEEEC-SSCEEEEEE--EECSSEEEEECCSSCCGG--GGHHHHHHHHT-TSEEEEECCTTSTTSCCCCTTCGGGGCH
T ss_pred CcceEEEE-CCEEEEEEE--ECCCCeEEEECCCCCCHH--HHHHHHHHHhc-CCEEEEecCCcccCCccccccccccccc
Confidence 34555554 577888554 456899999999999885 49999999976 6999999999999987543 23456
Q ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc---c---------cch
Q 022960 98 RREAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR---L---------GLG 164 (289)
Q Consensus 98 ~~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~---~---------~~~ 164 (289)
++.++|+.++++.+ +.++++++||||||.+|+.++.++|+ +.++|++++........... . ...
T Consensus 82 ~~~a~~~~~~~~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (293)
T d1ehya_ 82 DKAADDQAALLDAL---GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLD 158 (293)
T ss_dssp HHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCH
T ss_pred hhhhhHHHhhhhhc---CccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhccc
Confidence 77888998888877 78899999999999999999999999 99999998754221110000 0 000
Q ss_pred hH-----------hhhhhcCcccccccccccccc---------cChhh-------hhhhhccc--hhhhhcccccCceEE
Q 022960 165 YL-----------QRIKQNGFIDVRNKKGKLEYR---------VTQES-------LMDRLSTD--IHAACHMICQDCRVL 215 (289)
Q Consensus 165 ~~-----------~~~~~~~~~~~~~~~~~~~~~---------~~~~~-------~~~~~~~~--~~~~~~~~~~~~P~l 215 (289)
.. .......+............. ..... +....... .........+++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl 238 (293)
T d1ehya_ 159 MAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVT 238 (293)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEE
T ss_pred hhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccCCceE
Confidence 00 000000000000000000000 00000 00000000 001111224689999
Q ss_pred EEEeCCCCccChhhHH-HHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHH
Q 022960 216 TIHGTKDKMVPAEDAL-EFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFI 267 (289)
Q Consensus 216 ~i~g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl 267 (289)
+++|++|.++|.+... .+.+..+++++++++++||+++ ++|+++++.|.+||
T Consensus 239 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ff 292 (293)
T d1ehya_ 239 MIWGLGDTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 292 (293)
T ss_dssp EEEECCSSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred EEEeCCCCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHHHhh
Confidence 9999999999987665 4666779999999999999966 67889999999997
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=100.00 E-value=2e-31 Score=195.32 Aligned_cols=200 Identities=21% Similarity=0.233 Sum_probs=157.2
Q ss_pred eeeEEeeCCCCceEEEEEeecC-----CCcEEEEEcCC---CCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc
Q 022960 22 RRRVVIPNSHGEKLVGILHETG-----SKQLVIVCHGF---QSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL 93 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~-----~~~~iv~~hG~---~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 93 (289)
.+.+++...+| ++.+.+..+. +.+++|++|+. |++.++..+..+++.|+++||.|+.+|+||+|.|.+...
T Consensus 8 ~~~l~i~gp~G-~l~~~~~~p~~~~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~ 86 (218)
T d2fuka1 8 SAALTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD 86 (218)
T ss_dssp CEEEEEEETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCC
T ss_pred ceEEEEeCCCc-cEEEEEEcCCCCCCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccC
Confidence 45678888888 5776665442 34567889954 344333456789999999999999999999999988654
Q ss_pred ccchHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhc
Q 022960 94 YGNYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQN 172 (289)
Q Consensus 94 ~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (289)
. ...+.+|+.++++++.+. +.++++++||||||.+++.+|... .++++|+++++.....
T Consensus 87 ~--~~~~~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~~-~~~~lil~ap~~~~~~----------------- 146 (218)
T d2fuka1 87 H--GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL-EPQVLISIAPPAGRWD----------------- 146 (218)
T ss_dssp T--TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH-CCSEEEEESCCBTTBC-----------------
T ss_pred c--CcchHHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhccc-ccceEEEeCCcccchh-----------------
Confidence 3 356688999999999877 577999999999999999988764 4889999988533110
Q ss_pred CcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEcCCCcc
Q 022960 173 GFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHE 251 (289)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~ 251 (289)
.....+.+|+|+|+|++|.++|++.++++.+.++. +++++++|++|+
T Consensus 147 --------------------------------~~~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~ 194 (218)
T d2fuka1 147 --------------------------------FSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHF 194 (218)
T ss_dssp --------------------------------CTTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTT
T ss_pred --------------------------------hhccccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCC
Confidence 00012368999999999999999999999888764 789999999999
Q ss_pred cccCchHHHHHHHHHHHhhcCCC
Q 022960 252 FTSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 252 ~~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
|....+++.+.+.+|+++++..+
T Consensus 195 f~~~~~~l~~~~~~~v~~~l~~~ 217 (218)
T d2fuka1 195 FHRKLIDLRGALQHGVRRWLPAT 217 (218)
T ss_dssp CTTCHHHHHHHHHHHHGGGCSSC
T ss_pred CCCCHHHHHHHHHHHHHHhcCCC
Confidence 87666789999999999998654
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=8.4e-33 Score=210.19 Aligned_cols=223 Identities=16% Similarity=0.133 Sum_probs=149.4
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-ccchHHHHHHHHHHHHHHHhcCCceEEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-YGNYRREAEDLRAIVQDFCAKGRVITAII 122 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~~l~~~~~~~~~l~ 122 (289)
++++|||+||++++.. .|..+++.|+++||+|+++|+||||.|+.+.. ..++.+.+.|+..+++... ...+++++
T Consensus 1 eG~~vvllHG~~~~~~--~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lv 76 (258)
T d1xkla_ 1 EGKHFVLVHGACHGGW--SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLS--ADEKVILV 76 (258)
T ss_dssp CCCEEEEECCTTCCGG--GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSC--SSSCEEEE
T ss_pred CCCcEEEECCCCCCHH--HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhccc--cccccccc
Confidence 4689999999999884 49999999999999999999999999987543 3466666777766665442 34579999
Q ss_pred EeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCccc-----cc-ccccccccccChhhhhh
Q 022960 123 GHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID-----VR-NKKGKLEYRVTQESLMD 195 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~ 195 (289)
|||+||.+++.++.++|+ ++++|++++........................... .. .................
T Consensus 77 ghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (258)
T d1xkla_ 77 GHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAH 156 (258)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHH
T ss_pred ccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHHH
Confidence 999999999999999999 999999987543221111110000000000000000 00 00000000000000000
Q ss_pred hh----------------c--cch-------hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCc
Q 022960 196 RL----------------S--TDI-------HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADH 250 (289)
Q Consensus 196 ~~----------------~--~~~-------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 250 (289)
.. . ... ........+++|+++++|++|.++|++..+.+.+.++++++++++++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH 236 (258)
T d1xkla_ 157 KLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADH 236 (258)
T ss_dssp HTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCCSEEEEETTCCS
T ss_pred HhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHCCCCEEEEECCCCC
Confidence 00 0 000 0000111357999999999999999999999999999999999999999
Q ss_pred ccc-cCchHHHHHHHHHHHhh
Q 022960 251 EFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 251 ~~~-~~~~~~~~~i~~fl~~~ 270 (289)
+++ ++|+++++.|.+|++++
T Consensus 237 ~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 237 MAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp CHHHHSHHHHHHHHHHHHHHC
T ss_pred chHHhCHHHHHHHHHHHHHhc
Confidence 965 78899999999999874
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=6.6e-33 Score=210.88 Aligned_cols=220 Identities=14% Similarity=0.122 Sum_probs=148.7
Q ss_pred EEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc-cccchHHHHHHHHHHHHHHHhcCCceEEEEEeC
Q 022960 47 LVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S 125 (289)
-.||+||++++.. .|..+++.|.++||+|+++|+||||.|+.+. ...++++.++++.++++.+. ..++++|+|||
T Consensus 4 ~~vliHG~~~~~~--~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~lvGhS 79 (256)
T d3c70a1 4 HFVLIHTICHGAW--IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALP--PGEKVILVGES 79 (256)
T ss_dssp EEEEECCTTCCGG--GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSC--TTCCEEEEEET
T ss_pred cEEEeCCCCCCHH--HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhc--cccceeecccc
Confidence 3589999999884 5999999999999999999999999998764 34577888888888876542 35689999999
Q ss_pred hhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCccc---ccc-cccccccccChhhh-------
Q 022960 126 KGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID---VRN-KKGKLEYRVTQESL------- 193 (289)
Q Consensus 126 ~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~------- 193 (289)
|||.+++.++..+|+ |+++|++++........................... ... ..............
T Consensus 80 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
T d3c70a1 80 CGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTL 159 (256)
T ss_dssp THHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTT
T ss_pred hHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhh
Confidence 999999999999999 999999987543322111111100000000000000 000 00000000000000
Q ss_pred --------hhhhc---cch-------hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-c
Q 022960 194 --------MDRLS---TDI-------HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-S 254 (289)
Q Consensus 194 --------~~~~~---~~~-------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~ 254 (289)
..... ... ........+++|+++++|++|.++|++..+.+.+.+|++++++++++||+++ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~agH~~~~e 239 (256)
T d3c70a1 160 CGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLT 239 (256)
T ss_dssp SCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCCSEEEECCSCCSCHHHH
T ss_pred cchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHHh
Confidence 00000 000 0000111347899999999999999999999999999999999999999965 7
Q ss_pred CchHHHHHHHHHHHhh
Q 022960 255 HQDELASLVIQFIKAN 270 (289)
Q Consensus 255 ~~~~~~~~i~~fl~~~ 270 (289)
+|+++++.|.+|++++
T Consensus 240 ~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 240 KTKEIAEILQEVADTY 255 (256)
T ss_dssp SHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhc
Confidence 8899999999999764
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=100.00 E-value=4.2e-31 Score=210.28 Aligned_cols=235 Identities=17% Similarity=0.138 Sum_probs=163.3
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-c
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL-Y 94 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~ 94 (289)
+...+.+.++. +|.+|.++++.|. +.|+||++||++++.+. +..+.+.|.++||.|+++|+||||.|..... .
T Consensus 103 ~~~~e~v~ip~-dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~--~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~ 179 (360)
T d2jbwa1 103 SPPAERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEE--SFQMENLVLDRGMATATFDGPGQGEMFEYKRIA 179 (360)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTTT--THHHHHHHHHTTCEEEEECCTTSGGGTTTCCSC
T ss_pred CCCeEEeecCc-CCcccceEEEecCCCCCceEEEEeCCCCccHHH--HHHHHHHHHhcCCEEEEEccccccccCcccccc
Confidence 45567788885 6889999887553 56899999999988865 6778899999999999999999999976543 2
Q ss_pred cchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhh
Q 022960 95 GNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQ 171 (289)
Q Consensus 95 ~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
.++. .++..+++++... +.++|+|+||||||++++.+|...|+|+++|.+++..+........ ......+..
T Consensus 180 ~~~~---~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pri~a~V~~~~~~~~~~~~~~~--~~~~~~~~~ 254 (360)
T d2jbwa1 180 GDYE---KYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDLDYWDLET--PLTKESWKY 254 (360)
T ss_dssp SCHH---HHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTTCCEEEEESCCSCSTTGGGSC--HHHHHHHHH
T ss_pred ccHH---HHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCCCcceEEEEcccccHHHHhhhh--hhhhHHHHH
Confidence 2333 3444556666554 4568999999999999999999999999999999876653221110 000000000
Q ss_pred cCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC--cEEEEEcCCC
Q 022960 172 NGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN--HKLHIIEGAD 249 (289)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~g 249 (289)
... ......................++++|+|+++|++|. +|++.++.+++.+++ .+++++++++
T Consensus 255 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~ 321 (360)
T d2jbwa1 255 VSK------------VDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGD 321 (360)
T ss_dssp HTT------------CSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCC
T ss_pred hcc------------CCchHHHHHHHHhhcchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCC
Confidence 000 0000000000000001111122568999999999998 589999999999874 5778889999
Q ss_pred cccccCchHHHHHHHHHHHhhcCCC
Q 022960 250 HEFTSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 250 H~~~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
|.....+.+....|.+||.+.+...
T Consensus 322 H~~~~~~~~~~~~i~dWl~~~L~~g 346 (360)
T d2jbwa1 322 HCCHNLGIRPRLEMADWLYDVLVAG 346 (360)
T ss_dssp GGGGGGTTHHHHHHHHHHHHHHTSS
T ss_pred cCCCcChHHHHHHHHHHHHHHhccC
Confidence 9877777888899999999998543
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=4.5e-32 Score=204.19 Aligned_cols=226 Identities=17% Similarity=0.167 Sum_probs=146.8
Q ss_pred cCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 42 TGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 42 ~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
++++++|||+||++++... |..+++.|+++||+|+++|+||||.|..............++..++..+...+.+++++
T Consensus 8 ~~~~~~vvliHG~~~~~~~--~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (242)
T d1tqha_ 8 EAGERAVLLLHGFTGNSAD--VRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAV 85 (242)
T ss_dssp CCSSCEEEEECCTTCCTHH--HHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCCCCeEEEECCCCCCHHH--HHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhcccCceEE
Confidence 4567789999999998854 89999999999999999999999998766555555666777777777776668889999
Q ss_pred EEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccc-cccchhHhhhhhc-Ccc-cccccccccccccChhhhhhhhc
Q 022960 122 IGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEG-RLGLGYLQRIKQN-GFI-DVRNKKGKLEYRVTQESLMDRLS 198 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~ 198 (289)
+|||+||.+++.++.++|....++ +++.......... .....+....... ... .......................
T Consensus 86 ~G~S~Gg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (242)
T d1tqha_ 86 AGLSLGGVFSLKLGYTVPIEGIVT-MCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQE 164 (242)
T ss_dssp EEETHHHHHHHHHHTTSCCSCEEE-ESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCTTHHHHHH
T ss_pred EEcchHHHHhhhhcccCccccccc-ccccccccchhHHHHHHHHHHHHHhhhccchhhhHHHHHhhhhhhccchhhcccc
Confidence 999999999999999988744433 4433322211100 0000000000000 000 00000000000000000000000
Q ss_pred cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC--CCcEEEEEcCCCcccc-c-CchHHHHHHHHHHHhh
Q 022960 199 TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI--PNHKLHIIEGADHEFT-S-HQDELASLVIQFIKAN 270 (289)
Q Consensus 199 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~-~~~~~~~~i~~fl~~~ 270 (289)
...........+++|+|+++|++|.++|++.++.+++.+ +++++++++++||..+ + +++++.+.|.+||++.
T Consensus 165 ~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~Fl~~l 240 (242)
T d1tqha_ 165 LIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESL 240 (242)
T ss_dssp HHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTTHHHHHHHHHHHHHHS
T ss_pred cccccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 001111122245899999999999999999999999987 4589999999999966 4 3578999999999864
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.97 E-value=5e-31 Score=206.01 Aligned_cols=239 Identities=15% Similarity=0.102 Sum_probs=157.3
Q ss_pred eeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc--ccchHHH
Q 022960 23 RRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL--YGNYRRE 100 (289)
Q Consensus 23 ~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~ 100 (289)
++..+.+.||.+++|..++++++|+|||+||++++... |..+...|++ ||+|+++|+||||.|+.... .......
T Consensus 12 ~~~~v~~~dG~~i~y~~~G~~~g~pvvllHG~~~~~~~--w~~~~~~l~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~ 88 (313)
T d1wm1a_ 12 DSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGIS--PHHRQLFDPE-RYKVLLFDQRGCGRSRPHASLDNNTTWHL 88 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECTTSEEEEEECCTTTCCCC--GGGGGGSCTT-TEEEEEECCTTSTTCBSTTCCTTCSHHHH
T ss_pred cCCEEEeCCCcEEEEEEecCCCCCeEEEECCCCCcccc--hHHHHHHhhc-CCEEEEEeCCCcccccccccccccchhhH
Confidence 45667778999999888887788999999999999865 7777777765 79999999999999976543 4456677
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc-------ccchhHhhhhhc
Q 022960 101 AEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR-------LGLGYLQRIKQN 172 (289)
Q Consensus 101 ~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 172 (289)
.+|+..+++.+ +..+++++|||+||.++..+|...|+ |.+++++++........... ............
T Consensus 89 ~~d~~~~~~~~---~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (313)
T d1wm1a_ 89 VADIERLREMA---GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSI 165 (313)
T ss_dssp HHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTT
T ss_pred HHHHHhhhhcc---CCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhhhhhhhhh
Confidence 78888888877 88899999999999999999999999 99999988654321110000 000000000000
Q ss_pred -------------------Ccc-------------cccccc---cccc-cccChhhhhhh------------h--ccchh
Q 022960 173 -------------------GFI-------------DVRNKK---GKLE-YRVTQESLMDR------------L--STDIH 202 (289)
Q Consensus 173 -------------------~~~-------------~~~~~~---~~~~-~~~~~~~~~~~------------~--~~~~~ 202 (289)
... ...... .... ........... . .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
T d1wm1a_ 166 LSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQL 245 (313)
T ss_dssp SCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHH
T ss_pred hhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhhhhcccccchhh
Confidence 000 000000 0000 00000000000 0 00000
Q ss_pred hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHh
Q 022960 203 AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 203 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
.......+++|+++++|++|.++|++.++.+++.+|++++++++++||.+ ++| +...++.+.+++
T Consensus 246 ~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~p~a~~~~i~~aGH~~-~eP-~~~~~lv~a~~~ 310 (313)
T d1wm1a_ 246 LRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSY-DEP-GILHQLMIATDR 310 (313)
T ss_dssp HHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTTSEEEEETTCCSST-TSH-HHHHHHHHHHHH
T ss_pred hhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHCCCCEEEEECCCCCCc-CCc-hHHHHHHHHHHH
Confidence 11111235899999999999999999999999999999999999999975 344 444455555554
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1e-31 Score=204.80 Aligned_cols=213 Identities=17% Similarity=0.187 Sum_probs=138.2
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEe
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGH 124 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~ 124 (289)
+++|||+||++++.. .|..+++.|++ ||+|+++|+||||.|+.... .++ .|+.+.+. ....++++++||
T Consensus 11 ~~~lvllHG~~~~~~--~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~-~~~----~d~~~~~~---~~~~~~~~l~Gh 79 (256)
T d1m33a_ 11 NVHLVLLHGWGLNAE--VWRCIDEELSS-HFTLHLVDLPGFGRSRGFGA-LSL----ADMAEAVL---QQAPDKAIWLGW 79 (256)
T ss_dssp SSEEEEECCTTCCGG--GGGGTHHHHHT-TSEEEEECCTTSTTCCSCCC-CCH----HHHHHHHH---TTSCSSEEEEEE
T ss_pred CCeEEEECCCCCCHH--HHHHHHHHHhC-CCEEEEEeCCCCCCcccccc-ccc----cccccccc---cccccceeeeec
Confidence 478999999999885 48999999975 69999999999999975432 232 23333333 336778999999
Q ss_pred ChhHHHHHHHHHhCCC-ccEEEEeccCCcccccc-cccccc----hhHhhhhh---cCcccccc--cccccccc------
Q 022960 125 SKGGNAVLLYASKYND-ISIVINISGRFNLKRGI-EGRLGL----GYLQRIKQ---NGFIDVRN--KKGKLEYR------ 187 (289)
Q Consensus 125 S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~-~~~~~~----~~~~~~~~---~~~~~~~~--~~~~~~~~------ 187 (289)
||||.+++.+|.++|+ +++++++++........ ...... .+...+.. ........ ........
T Consensus 80 S~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
T d1m33a_ 80 SLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARAL 159 (256)
T ss_dssp THHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHHH
T ss_pred ccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhccccchhhHHHHH
Confidence 9999999999999999 99999987643322111 101100 00000000 00000000 00000000
Q ss_pred ---------cChhhhhhh----hccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccc-
Q 022960 188 ---------VTQESLMDR----LSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFT- 253 (289)
Q Consensus 188 ---------~~~~~~~~~----~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~- 253 (289)
.....+... ...+..... .++++|+++++|++|.++|++.++.+.+.+|++++++++++||+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~~~~~~~i~~~gH~~~~ 237 (256)
T d1m33a_ 160 KKTVLALPMPEVDVLNGGLEILKTVDLRQPL--QNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFI 237 (256)
T ss_dssp HHHHHTSCCCCHHHHHHHHHHHHHCCCTTGG--GGCCSCEEEEEETTCSSSCGGGCC-CTTTCTTCEEEEETTCCSCHHH
T ss_pred HHhhhhcchhhHHHHHhhhhhhcccchHHHH--HhccCCccccccccCCCCCHHHHHHHHHHCCCCEEEEECCCCCchHH
Confidence 000000000 001111122 2468999999999999999999999999999999999999999965
Q ss_pred cCchHHHHHHHHHHHhh
Q 022960 254 SHQDELASLVIQFIKAN 270 (289)
Q Consensus 254 ~~~~~~~~~i~~fl~~~ 270 (289)
++|+++++.|.+||++.
T Consensus 238 e~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 238 SHPAEFCHLLVALKQRV 254 (256)
T ss_dssp HSHHHHHHHHHHHHTTS
T ss_pred HCHHHHHHHHHHHHHHc
Confidence 77899999999999763
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.97 E-value=4.3e-31 Score=212.30 Aligned_cols=251 Identities=13% Similarity=0.105 Sum_probs=158.3
Q ss_pred ccceeeEEeeCCCCceEEEEEee--------cCCCcEEEEEcCCCCCCCCcch----HHHHHHHHHcCccEEEEccccCC
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHE--------TGSKQLVIVCHGFQSTKDRIPM----VNLAAALEREGISAFRFDFSGNG 86 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~--------~~~~~~iv~~hG~~~~~~~~~~----~~~~~~l~~~G~~v~~~d~~G~G 86 (289)
+.+.++..+++.||..|..+... .+++|+||++||+++++..|.. ..++..|+++||+|+++|+||||
T Consensus 24 ~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G 103 (377)
T d1k8qa_ 24 GYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNT 103 (377)
T ss_dssp TCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTST
T ss_pred CCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCC
Confidence 45668889999999888765432 2367899999999998865211 44889999999999999999999
Q ss_pred CCCCCcc---------ccchHHH-HHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 87 ESEGSFL---------YGNYRRE-AEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 87 ~s~~~~~---------~~~~~~~-~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
.|+.+.. ..++++. ..|+.++++++.+. +.++++|+||||||.+++.+|..+|+ +++++++.......
T Consensus 104 ~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~ 183 (377)
T d1k8qa_ 104 WARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVA 183 (377)
T ss_dssp TSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCS
T ss_pred CCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeeccccc
Confidence 9975321 2233343 45778888877655 77899999999999999999999998 77766654322110
Q ss_pred ---c--cccccccc---h---------------hHhh-hhhcCccc-cc---------ccccccccc-------------
Q 022960 155 ---R--GIEGRLGL---G---------------YLQR-IKQNGFID-VR---------NKKGKLEYR------------- 187 (289)
Q Consensus 155 ---~--~~~~~~~~---~---------------~~~~-~~~~~~~~-~~---------~~~~~~~~~------------- 187 (289)
. ........ . .... ........ .. .........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (377)
T d1k8qa_ 184 TVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHN 263 (377)
T ss_dssp CCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTC
T ss_pred cccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcccccHHHhhhhhhcc
Confidence 0 00000000 0 0000 00000000 00 000000000
Q ss_pred ---cChhhhhhhh---cc------c--------------hhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCc-
Q 022960 188 ---VTQESLMDRL---ST------D--------------IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNH- 240 (289)
Q Consensus 188 ---~~~~~~~~~~---~~------~--------------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~- 240 (289)
.....+.... .. + ........++++|+|+++|++|.+++++.++.+.+.+|+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~~~lp~~~ 343 (377)
T d1k8qa_ 264 PAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLI 343 (377)
T ss_dssp CCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTEE
T ss_pred cccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHHHHCCCCe
Confidence 0000000000 00 0 0000012256899999999999999999999999999985
Q ss_pred EEEEEcCCCcc-cc--cC-chHHHHHHHHHHHh
Q 022960 241 KLHIIEGADHE-FT--SH-QDELASLVIQFIKA 269 (289)
Q Consensus 241 ~~~~~~~~gH~-~~--~~-~~~~~~~i~~fl~~ 269 (289)
+.+.++++||. ++ .+ ++++.+.|.+||++
T Consensus 344 ~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 344 YHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred EEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 78899999997 32 23 57899999999985
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.97 E-value=2.1e-30 Score=201.10 Aligned_cols=236 Identities=12% Similarity=0.105 Sum_probs=144.7
Q ss_pred eeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccc----hHHHHH
Q 022960 27 IPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN----YRREAE 102 (289)
Q Consensus 27 ~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~----~~~~~~ 102 (289)
+...+|.+++|. ..|++|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+....... .....+
T Consensus 12 fi~~~g~~i~y~--~~G~g~~vvllHG~~~~~~--~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~ 86 (298)
T d1mj5a_ 12 FIEIKGRRMAYI--DEGTGDPILFQHGNPTSSY--LWRNIMPHCAGL-GRLIACDLIGMGDSDKLDPSGPERYAYAEHRD 86 (298)
T ss_dssp EEEETTEEEEEE--EESCSSEEEEECCTTCCGG--GGTTTGGGGTTS-SEEEEECCTTSTTSCCCSSCSTTSSCHHHHHH
T ss_pred EEEECCEEEEEE--EEcCCCcEEEECCCCCCHH--HHHHHHHHHhcC-CEEEEEeCCCCCCCCCCccccccccccchhhh
Confidence 333478889855 4456799999999999885 489999999875 9999999999999986543222 222233
Q ss_pred HHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccch-----------------
Q 022960 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLG----------------- 164 (289)
Q Consensus 103 d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~----------------- 164 (289)
++..++... ...++++++||||||.+++.++.++|+ |.+++++++...............
T Consensus 87 ~~~~~~~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (298)
T d1mj5a_ 87 YLDALWEAL--DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQ 164 (298)
T ss_dssp HHHHHHHHT--TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHTT
T ss_pred hhccccccc--cccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 333333222 156789999999999999999999999 999999886543321111000000
Q ss_pred ---hHhhhhhcCcccccccc-------cccccccChhhhhhhh-------------ccchhhhhcccccCceEEEEEeCC
Q 022960 165 ---YLQRIKQNGFIDVRNKK-------GKLEYRVTQESLMDRL-------------STDIHAACHMICQDCRVLTIHGTK 221 (289)
Q Consensus 165 ---~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~P~l~i~g~~ 221 (289)
+................ ................ ............+.+|+++++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 244 (298)
T d1mj5a_ 165 DNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEP 244 (298)
T ss_dssp TCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred hhhhhhhhccccccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhhhhcceeEEEEecCC
Confidence 00000000000000000 0000000000000000 000000011124589999999999
Q ss_pred CCccChhhHHHHHhhCCCcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 222 DKMVPAEDALEFDKFIPNHKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 222 D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
|.+.+ ...+.+.+.+++.++++++ +||+++ +.|+++++.|.+||++.-
T Consensus 245 d~~~~-~~~~~~~~~~p~~~~~~~~-~GH~~~~e~P~~v~~~i~~fl~~~~ 293 (298)
T d1mj5a_ 245 GALTT-GRMRDFCRTWPNQTEITVA-GAHFIQEDSPDEIGAAIAAFVRRLR 293 (298)
T ss_dssp CSSSS-HHHHHHHTTCSSEEEEEEE-ESSCGGGTCHHHHHHHHHHHHHHHS
T ss_pred CCcCh-HHHHHHHHHCCCCEEEEeC-CCCchHHhCHHHHHHHHHHHHhhhc
Confidence 98664 5667888999998887765 699976 667899999999998863
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.97 E-value=7.5e-29 Score=194.80 Aligned_cols=242 Identities=14% Similarity=0.125 Sum_probs=165.7
Q ss_pred CcccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL 93 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 93 (289)
...+..+++++++.||.++.++++.|. +.|+||++||++++... |...+..|+++||.|+++|+||||.|.+...
T Consensus 51 ~~~~~~~~v~~~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~--~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~ 128 (318)
T d1l7aa_ 51 ADGVKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDG--EIHEMVNWALHGYATFGMLVRGQQRSEDTSI 128 (318)
T ss_dssp CSSEEEEEEEEEEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGG--GHHHHHHHHHTTCEEEEECCTTTSSSCCCCC
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEecCCCCCceEEEEecCCCCCccc--hHHHHHHHHHCCCEEEEEeeCCCCCCCCCcc
Confidence 345677889999999999999877543 56899999999998854 8889999999999999999999999976432
Q ss_pred cc------------------chHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCc
Q 022960 94 YG------------------NYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFN 152 (289)
Q Consensus 94 ~~------------------~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~ 152 (289)
.. .......|....++++... +..++.++|+|+||..++..+...+++++++...+...
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~~~~~~~~~~~~~ 208 (318)
T d1l7aa_ 129 SPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLS 208 (318)
T ss_dssp CSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSCCSEEEEESCCSC
T ss_pred cchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcccceEEEeccccc
Confidence 11 1223456777778887766 34579999999999999999999999888887766543
Q ss_pred ccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHH
Q 022960 153 LKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALE 232 (289)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 232 (289)
................... +.. ...........+............ .++++|+|+++|++|.++|++.++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~Lii~G~~D~~vp~~~~~~ 279 (318)
T d1l7aa_ 209 NFERAIDVALEQPYLEINS--FFR-----RNGSPETEVQAMKTLSYFDIMNLA--DRVKVPVLMSIGLIDKVTPPSTVFA 279 (318)
T ss_dssp CHHHHHHHCCSTTTTHHHH--HHH-----HSCCHHHHHHHHHHHHTTCHHHHG--GGCCSCEEEEEETTCSSSCHHHHHH
T ss_pred cHHHHhhcccccccchhhh--hhh-----cccccccccccccccccccccccc--ccCCCCEEEEEECCCCCcCHHHHHH
Confidence 2211111000000000000 000 000000000001111111111112 2458999999999999999999999
Q ss_pred HHhhCC-CcEEEEEcCCCcccccCchHHHHHHHHHHHhhcC
Q 022960 233 FDKFIP-NHKLHIIEGADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 233 ~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
+++.++ ++++++++++||.+ .+++.+++.+||+++++
T Consensus 280 ~~~~l~~~~~l~~~~~~gH~~---~~~~~~~~~~fl~~~Lk 317 (318)
T d1l7aa_ 280 AYNHLETKKELKVYRYFGHEY---IPAFQTEKLAFFKQILK 317 (318)
T ss_dssp HHHHCCSSEEEEEETTCCSSC---CHHHHHHHHHHHHHHHC
T ss_pred HHHHcCCCcEEEEECCCCCCC---cHHHHHHHHHHHHHhCC
Confidence 999887 58999999999975 46788899999999875
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.97 E-value=1.6e-29 Score=193.05 Aligned_cols=235 Identities=16% Similarity=0.127 Sum_probs=165.0
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLY 94 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~ 94 (289)
....+.+.+++.||.+|.++++.|. +.|+||++||++.......|..++..|+++||.|+++|+||++.+......
T Consensus 9 ~~~~~~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~ 88 (260)
T d2hu7a2 9 IAGSRLVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRL 88 (260)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHH
T ss_pred cCceEEEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeecccccccccc
Confidence 3556788999999999999877654 457999999965443334477889999999999999999998876543211
Q ss_pred c----chHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhh
Q 022960 95 G----NYRREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQR 168 (289)
Q Consensus 95 ~----~~~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 168 (289)
. ......+|+.++++++.++ +..++.++|+|+||.+++.++..+|+ +++++..+|..+....... .......
T Consensus 89 ~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~--~~~~~~~ 166 (260)
T d2hu7a2 89 KIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYEL--SDAAFRN 166 (260)
T ss_dssp TTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHHHHT--CCHHHHH
T ss_pred ccccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhhhhcc--ccccccc
Confidence 1 1134568999999999887 45789999999999999999999999 8999998887664322110 0111100
Q ss_pred hhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----CCcEEEE
Q 022960 169 IKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI----PNHKLHI 244 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~ 244 (289)
..... .....+.+.. .+..... .++++|+|++||++|.++|++.+..+.+.+ ..+++++
T Consensus 167 ~~~~~------------~~~~~~~~~~---~~~~~~~--~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~ 229 (260)
T d2hu7a2 167 FIEQL------------TGGSREIMRS---RSPINHV--DRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHI 229 (260)
T ss_dssp HHHHH------------HCSCHHHHHH---TCGGGCG--GGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccc------------cccccccccc---cchhhcc--cccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEE
Confidence 00000 0000111111 0111111 245889999999999999999998887665 3478999
Q ss_pred EcCCCcccc--cCchHHHHHHHHHHHhhcC
Q 022960 245 IEGADHEFT--SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 245 ~~~~gH~~~--~~~~~~~~~i~~fl~~~~~ 272 (289)
++|++|.+. ++..++.+.+.+||+++++
T Consensus 230 ~~g~~H~~~~~e~~~~~~~~~~~fl~~hl~ 259 (260)
T d2hu7a2 230 IPDAGHAINTMEDAVKILLPAVFFLATQRE 259 (260)
T ss_dssp ETTCCSSCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred ECcCCCCCCChHhHHHHHHHHHHHHHHHhc
Confidence 999999864 3345788899999999875
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.96 E-value=2.5e-29 Score=191.41 Aligned_cols=226 Identities=14% Similarity=0.136 Sum_probs=129.6
Q ss_pred CceEEEEEeec-CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHH
Q 022960 32 GEKLVGILHET-GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 32 g~~l~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 110 (289)
+.+++ |..+ +++|+|||+||++++... |..+++.|++.||+|+++|+||||.|.......... ...+. ..+..
T Consensus 4 ~~~lh--~~~~~~~~P~ivllHG~~~~~~~--~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~-~~~~~-~~~~~ 77 (264)
T d1r3da_ 4 SNQLH--FAKPTARTPLVVLVHGLLGSGAD--WQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAE-AVEMI-EQTVQ 77 (264)
T ss_dssp CEEEE--SSCCBTTBCEEEEECCTTCCGGG--GHHHHHHHTTSSCEEEEECCTTCSSCC-------CH-HHHHH-HHHHH
T ss_pred CCeEE--EcCCCCCCCeEEEeCCCCCCHHH--HHHHHHHHHhCCCEEEEEecccccccccccccccch-hhhhh-hhccc
Confidence 34555 3344 367899999999999854 999999999889999999999999997655332211 11111 11111
Q ss_pred HHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc---cccc----chhHhhhhhcCcccccc-cc
Q 022960 111 FCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE---GRLG----LGYLQRIKQNGFIDVRN-KK 181 (289)
Q Consensus 111 l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~-~~ 181 (289)
......++++++||||||.+++.++.++|+ +.+++++.+......... .... ................. ..
T Consensus 78 ~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T d1r3da_ 78 AHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWY 157 (264)
T ss_dssp TTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHT
T ss_pred ccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 222256789999999999999999999998 777776654322111000 0000 00000000000000000 00
Q ss_pred cccccc-cC---------------hhhhhhhh-------ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC
Q 022960 182 GKLEYR-VT---------------QESLMDRL-------STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP 238 (289)
Q Consensus 182 ~~~~~~-~~---------------~~~~~~~~-------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 238 (289)
...... .. ........ ....... ...+++|+++++|++|..+. .+.+ .+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~p~l~i~G~~D~~~~-----~~~~-~~ 229 (264)
T d1r3da_ 158 QQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPA--LQALKLPIHYVCGEQDSKFQ-----QLAE-SS 229 (264)
T ss_dssp TSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHH--HHTCSSCEEEEEETTCHHHH-----HHHH-HH
T ss_pred hhhhhcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhh--hhccCcceEEEEeCCcHHHH-----HHHh-cC
Confidence 000000 00 00000000 0000111 12458999999999996542 2222 26
Q ss_pred CcEEEEEcCCCcccc-cCchHHHHHHHHHHHhhc
Q 022960 239 NHKLHIIEGADHEFT-SHQDELASLVIQFIKANY 271 (289)
Q Consensus 239 ~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 271 (289)
++++++++++||+++ ++|+++++.|.+||++..
T Consensus 230 ~~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 230 GLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp CSEEEEETTCCSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 899999999999965 778899999999999864
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=2.2e-27 Score=171.90 Aligned_cols=178 Identities=15% Similarity=0.165 Sum_probs=124.4
Q ss_pred cEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEeC
Q 022960 46 QLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGHS 125 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~S 125 (289)
..||++||++++..+.++..+++.|+++||.|+++|+||+|.+. .+++++.+. .+......+++|+|||
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~-------~~~~~~~l~----~~~~~~~~~~~lvGhS 70 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPR-------LEDWLDTLS----LYQHTLHENTYLVAHS 70 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCC-------HHHHHHHHH----TTGGGCCTTEEEEEET
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcch-------HHHHHHHHH----HHHhccCCCcEEEEec
Confidence 46999999999876544788999999999999999999998653 233333333 3333345689999999
Q ss_pred hhHHHHHHHHHhCCC---ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchh
Q 022960 126 KGGNAVLLYASKYND---ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIH 202 (289)
Q Consensus 126 ~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (289)
|||.+++.++.+++. +.+++..+++......... .... . .....
T Consensus 71 ~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~-----~---------~~~~~------------- 117 (186)
T d1uxoa_ 71 LGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQM------LDEF-----T---------QGSFD------------- 117 (186)
T ss_dssp THHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGG------GGGG-----T---------CSCCC-------------
T ss_pred hhhHHHHHHHHhCCccceeeEEeecccccccchhhhh------hhhh-----h---------ccccc-------------
Confidence 999999999999987 4455555543322111000 0000 0 00000
Q ss_pred hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccC----chHHHHHHHHHHHh
Q 022960 203 AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSH----QDELASLVIQFIKA 269 (289)
Q Consensus 203 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~i~~fl~~ 269 (289)
.....++.+|+++++|++|+++|++.++.+++.+ ++++++++++||+...+ -+++.+.|.+||++
T Consensus 118 -~~~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 118 -HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 186 (186)
T ss_dssp -HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred -ccccccCCCCEEEEecCCCCCCCHHHHHHHHHHc-CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHcC
Confidence 0000123689999999999999999999999988 78999999999986533 26788888888863
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.95 E-value=1e-25 Score=166.54 Aligned_cols=200 Identities=20% Similarity=0.254 Sum_probs=158.7
Q ss_pred eEEeeCCCCceEEEEEeecC--CCcEEEEEcCC---CCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchH
Q 022960 24 RVVIPNSHGEKLVGILHETG--SKQLVIVCHGF---QSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYR 98 (289)
Q Consensus 24 ~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~---~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~ 98 (289)
++.|+..+| +|.+++..+. +.+++|++||. |++.++.....+++.|.+.||.|+.+|+||.|.|.+..... .
T Consensus 2 ev~i~g~~G-~Le~~~~~~~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~--~ 78 (218)
T d2i3da1 2 EVIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHG--A 78 (218)
T ss_dssp EEEEEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSS--H
T ss_pred cEEEeCCCc-cEEEEEeCCCCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccc--h
Confidence 467888888 7998877654 46799999984 55554445667889999999999999999999999887543 4
Q ss_pred HHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCccc
Q 022960 99 REAEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFID 176 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (289)
...+|..++++++..+ ...+++++|+|+||.+++.++.+.+.+.+++++.+........
T Consensus 79 ~e~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~------------------- 139 (218)
T d2i3da1 79 GELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPEIEGFMSIAPQPNTYDFS------------------- 139 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTTEEEEEEESCCTTTSCCT-------------------
T ss_pred hHHHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhccccceeeccccccccchh-------------------
Confidence 4568888999998776 3457999999999999999998888888888887754322100
Q ss_pred ccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC-----CcEEEEEcCCCcc
Q 022960 177 VRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP-----NHKLHIIEGADHE 251 (289)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~ 251 (289)
......+|+++++|+.|.+++.+....+.+.+. ..++++++|++|+
T Consensus 140 -----------------------------~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHf 190 (218)
T d2i3da1 140 -----------------------------FLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHF 190 (218)
T ss_dssp -----------------------------TCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTT
T ss_pred -----------------------------hccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCC
Confidence 000126799999999999999998888766543 3589999999999
Q ss_pred cccCchHHHHHHHHHHHhhcCCC
Q 022960 252 FTSHQDELASLVIQFIKANYQKD 274 (289)
Q Consensus 252 ~~~~~~~~~~~i~~fl~~~~~~~ 274 (289)
|....+++.+.+.+||++++...
T Consensus 191 F~g~~~~l~~~v~~~l~~~l~~~ 213 (218)
T d2i3da1 191 FNGKVDELMGECEDYLDRRLNGE 213 (218)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CcCCHHHHHHHHHHHHHHhcCCC
Confidence 98777899999999999998654
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.95 E-value=2.2e-26 Score=180.96 Aligned_cols=238 Identities=16% Similarity=0.098 Sum_probs=157.4
Q ss_pred CcccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCc
Q 022960 17 DPVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSF 92 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 92 (289)
...++.++++|++.||.+|+++++.|. +.|+||++||++.+... +. ....++++||.|+++|+||||.|....
T Consensus 50 ~~~~~~~~v~~~s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~--~~-~~~~~a~~G~~v~~~D~rG~G~s~~~~ 126 (322)
T d1vlqa_ 50 LKTVEAYDVTFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGF--PH-DWLFWPSMGYICFVMDTRGQGSGWLKG 126 (322)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCC--GG-GGCHHHHTTCEEEEECCTTCCCSSSCC
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcCc--HH-HHHHHHhCCCEEEEeeccccCCCCCCc
Confidence 445677899999999999999987653 45799999999877643 33 345788899999999999999886432
Q ss_pred cc-------------------------cchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEE
Q 022960 93 LY-------------------------GNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIV 144 (289)
Q Consensus 93 ~~-------------------------~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~ 144 (289)
.. ........|+..+++++..+ +..++.++|+|+||.+++.++...+.++++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~~~~a~ 206 (322)
T d1vlqa_ 127 DTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKAL 206 (322)
T ss_dssp CCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSSCCEE
T ss_pred cccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCCCccEE
Confidence 11 11123457888888888776 345899999999999999999988889999
Q ss_pred EEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhh-ccchhhhhcccccCceEEEEEeCCCC
Q 022960 145 INISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRL-STDIHAACHMICQDCRVLTIHGTKDK 223 (289)
Q Consensus 145 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~ 223 (289)
+...+....................... . .............. ..+...... ++++|+|+++|++|.
T Consensus 207 v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~d~~~~a~--~i~~P~Lv~~G~~D~ 274 (322)
T d1vlqa_ 207 LCDVPFLCHFRRAVQLVDTHPYAEITNF--L--------KTHRDKEEIVFRTLSYFDGVNFAA--RAKIPALFSVGLMDN 274 (322)
T ss_dssp EEESCCSCCHHHHHHHCCCTTHHHHHHH--H--------HHCTTCHHHHHHHHHTTCHHHHHT--TCCSCEEEEEETTCS
T ss_pred EEeCCccccHHHHHhhccccchhhHHhh--h--------hcCcchhhhHHHHhhhhhHHHHHh--cCCCCEEEEEeCCCC
Confidence 8877654432211111110000000000 0 00000000001100 011111122 458999999999999
Q ss_pred ccChhhHHHHHhhCC-CcEEEEEcCCCcccccCchHHHHHHHHHHHhhc
Q 022960 224 MVPAEDALEFDKFIP-NHKLHIIEGADHEFTSHQDELASLVIQFIKANY 271 (289)
Q Consensus 224 ~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~ 271 (289)
++|++.+..+++.++ .++++++|+++|... .....+...+||++.+
T Consensus 275 ~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~~--~~~~~~~~~~~l~~~l 321 (322)
T d1vlqa_ 275 ICPPSTVFAAYNYYAGPKEIRIYPYNNHEGG--GSFQAVEQVKFLKKLF 321 (322)
T ss_dssp SSCHHHHHHHHHHCCSSEEEEEETTCCTTTT--HHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHCCCCeEEEEECCCCCCCc--cccCHHHHHHHHHHHh
Confidence 999999999988886 489999999999642 1222344568998875
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2e-27 Score=181.43 Aligned_cols=101 Identities=21% Similarity=0.209 Sum_probs=87.3
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
+.+|||++||++++... |..+.+.|.+. ||.|+++|+||||.|..+. ..+++..++|+.++++.+ + ++++|
T Consensus 1 ~~~PvvllHG~~~~~~~--~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~-~~~~~~~~~~l~~~l~~l---~-~~~~l 73 (268)
T d1pjaa_ 1 SYKPVIVVHGLFDSSYS--FRHLLEYINETHPGTVVTVLDLFDGRESLRPL-WEQVQGFREAVVPIMAKA---P-QGVHL 73 (268)
T ss_dssp CCCCEEEECCTTCCGGG--GHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH-HHHHHHHHHHHHHHHHHC---T-TCEEE
T ss_pred CCCCEEEECCCCCCHHH--HHHHHHHHHhhCCCeEEEEeCCCCCCCCCCcc-ccCHHHHHHHHHHHHhcc---C-CeEEE
Confidence 35778999999999865 99999999886 7999999999999998654 346677888888888766 5 78999
Q ss_pred EEeChhHHHHHHHHHhCCC--ccEEEEeccCC
Q 022960 122 IGHSKGGNAVLLYASKYND--ISIVINISGRF 151 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~ 151 (289)
+||||||.+|+.+|.++|+ |+++|+++++.
T Consensus 74 vGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 74 ICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 105 (268)
T ss_dssp EEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred EccccHHHHHHHHHHHCCccccceEEEECCCC
Confidence 9999999999999999986 99999998754
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.94 E-value=4.4e-27 Score=189.81 Aligned_cols=234 Identities=12% Similarity=-0.010 Sum_probs=152.7
Q ss_pred CCCCceEEEEEeec--CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcC------ccEEEEccccCCCCCCCc--cccchH
Q 022960 29 NSHGEKLVGILHET--GSKQLVIVCHGFQSTKDRIPMVNLAAALEREG------ISAFRFDFSGNGESEGSF--LYGNYR 98 (289)
Q Consensus 29 ~~~g~~l~~~~~~~--~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G------~~v~~~d~~G~G~s~~~~--~~~~~~ 98 (289)
.-||.+|++..... +++++|||+||++++.. .|..+++.|++.| |+|+++|+||||.|+.+. ..++..
T Consensus 88 ~i~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~--~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~~y~~~ 165 (394)
T d1qo7a_ 88 EIEGLTIHFAALFSEREDAVPIALLHGWPGSFV--EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLM 165 (394)
T ss_dssp EETTEEEEEEEECCSCTTCEEEEEECCSSCCGG--GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSSCCCHH
T ss_pred EECCEEEEEEEEeccCCCCCEEEEeccccccHH--HHHHHHHhhccccCCcccceeeecccccccCCCCCCCCCCccCHH
Confidence 34799999764433 46889999999999995 5999999999987 999999999999998764 346778
Q ss_pred HHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc--c---cchhHhhh---
Q 022960 99 REAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR--L---GLGYLQRI--- 169 (289)
Q Consensus 99 ~~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~--~---~~~~~~~~--- 169 (289)
..++++..+++.+ +..+.+++|||+||.++..++..+|+ +.+++++............. . ........
T Consensus 166 ~~a~~~~~l~~~l---g~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (394)
T d1qo7a_ 166 DNARVVDQLMKDL---GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKF 242 (394)
T ss_dssp HHHHHHHHHHHHT---TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc---cCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccccccccccccchhhhHHHHHHHHHH
Confidence 8899999999988 88889999999999999999999998 88877776543221110000 0 00000000
Q ss_pred -hhc-Cc----------------------cccc-c-cccccccccChhhhhhhh--------------------ccc---
Q 022960 170 -KQN-GF----------------------IDVR-N-KKGKLEYRVTQESLMDRL--------------------STD--- 200 (289)
Q Consensus 170 -~~~-~~----------------------~~~~-~-~~~~~~~~~~~~~~~~~~--------------------~~~--- 200 (289)
... .+ .... . .............+.... ...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 322 (394)
T d1qo7a_ 243 MTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTASAP 322 (394)
T ss_dssp HHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHHHHHTTCHHHHGGGHHHHCC-----
T ss_pred HHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHHHHhhccccchhHHHHHHHhhccccc
Confidence 000 00 0000 0 000000001111111000 000
Q ss_pred --hhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEcCCCcccc-cCchHHHHHHHHHHHhh
Q 022960 201 --IHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHEFT-SHQDELASLVIQFIKAN 270 (289)
Q Consensus 201 --~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 270 (289)
........+|++|+++++|.+|...+++ .+.+.+++ .++..++++||+.+ +.|+++++.|.+||++.
T Consensus 323 ~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~~v 393 (394)
T d1qo7a_ 323 NGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQV 393 (394)
T ss_dssp ----CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHH
T ss_pred chhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhccCceEEEEcCCcCCchHHhCHHHHHHHHHHHHHHh
Confidence 0001111246899999999999876654 34555555 56788999999976 77899999999999875
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=1.3e-25 Score=169.03 Aligned_cols=216 Identities=16% Similarity=0.200 Sum_probs=137.6
Q ss_pred ceeeEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccc----
Q 022960 21 QRRRVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN---- 96 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~---- 96 (289)
..+++++. |..+.+ ..+.+++|+||++||++++... |..+++.|++.||.|+++|+||||.|........
T Consensus 4 ~~~~~~l~---g~~~~~-~~p~~~~~~vl~lHG~~~~~~~--~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~ 77 (238)
T d1ufoa_ 4 RTERLTLA---GLSVLA-RIPEAPKALLLALHGLQGSKEH--ILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRY 77 (238)
T ss_dssp EEEEEEET---TEEEEE-EEESSCCEEEEEECCTTCCHHH--HHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTH
T ss_pred EEEEEEEC---CEEEEe-cCCCCCCeEEEEeCCCCCCHHH--HHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchh
Confidence 34455543 543332 2334578999999999999854 8889999999999999999999999875432211
Q ss_pred hHHHH----HHHHH---HHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhh
Q 022960 97 YRREA----EDLRA---IVQDFCAKGRVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRI 169 (289)
Q Consensus 97 ~~~~~----~d~~~---~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
..... .++.+ ++......+..++.++|+|+||.+++.++..+|++++++.+.+...............
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 152 (238)
T d1ufoa_ 78 VEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVED----- 152 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTCCCCC-----
T ss_pred hhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcchhheeeeeeecccccccccccccc-----
Confidence 11111 22222 2222222255789999999999999999999999777666655433221111000000
Q ss_pred hhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC------CcEEE
Q 022960 170 KQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP------NHKLH 243 (289)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~ 243 (289)
.........+...... ...++|+|+++|++|.++|.+.+..+++.+. +.+++
T Consensus 153 ---------------------~~~~~~~~~~~~~~~~-~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 210 (238)
T d1ufoa_ 153 ---------------------PGVLALYQAPPATRGE-AYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARF 210 (238)
T ss_dssp ---------------------HHHHHHHHSCGGGCGG-GGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEE
T ss_pred ---------------------ccccchhhhhhhhhhh-hhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEE
Confidence 0000000011110000 1226799999999999999999988887652 35788
Q ss_pred EEcCCCcccccCchHHHHHHHHHHHhhcC
Q 022960 244 IIEGADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 244 ~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
.++|+||.+ .++..+.+.+|+++++.
T Consensus 211 ~~~g~gH~~---~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 211 VEEGAGHTL---TPLMARVGLAFLEHWLE 236 (238)
T ss_dssp EETTCCSSC---CHHHHHHHHHHHHHHHH
T ss_pred EECCCCCcc---CHHHHHHHHHHHHHHhc
Confidence 899999986 34567778888888764
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.93 E-value=1.3e-24 Score=165.06 Aligned_cols=170 Identities=18% Similarity=0.283 Sum_probs=134.9
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-------CC
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-------GR 116 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-------~~ 116 (289)
+.|+||++||++++... +..+++.|+++||.|+++|++|++... .....|+.++++++.+. +.
T Consensus 51 ~~P~Vv~~HG~~g~~~~--~~~~a~~lA~~Gy~V~~~d~~~~~~~~--------~~~~~d~~~~~~~l~~~~~~~~~vD~ 120 (260)
T d1jfra_ 51 TFGAVVISPGFTAYQSS--IAWLGPRLASQGFVVFTIDTNTTLDQP--------DSRGRQLLSALDYLTQRSSVRTRVDA 120 (260)
T ss_dssp CEEEEEEECCTTCCGGG--TTTHHHHHHTTTCEEEEECCSSTTCCH--------HHHHHHHHHHHHHHHHTSTTGGGEEE
T ss_pred CccEEEEECCCCCCHHH--HHHHHHHHHhCCCEEEEEeeCCCcCCc--------hhhHHHHHHHHHHHHhhhhhhccccc
Confidence 44799999999999865 778999999999999999999876542 34457777778777663 45
Q ss_pred ceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhh
Q 022960 117 VITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDR 196 (289)
Q Consensus 117 ~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (289)
++|.++|||+||.+++.++...++++++|.+++......
T Consensus 121 ~rI~v~G~S~GG~~al~aa~~~~~~~A~v~~~~~~~~~~----------------------------------------- 159 (260)
T d1jfra_ 121 TRLGVMGHSMGGGGSLEAAKSRTSLKAAIPLTGWNTDKT----------------------------------------- 159 (260)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCTTCSEEEEESCCCSCCC-----------------------------------------
T ss_pred cceEEEeccccchHHHHHHhhhccchhheeeeccccccc-----------------------------------------
Confidence 689999999999999999999999999998887532110
Q ss_pred hccchhhhhcccccCceEEEEEeCCCCccChhh-HHHHHhhCC---CcEEEEEcCCCcccccC-chHHHHHHHHHHHhhc
Q 022960 197 LSTDIHAACHMICQDCRVLTIHGTKDKMVPAED-ALEFDKFIP---NHKLHIIEGADHEFTSH-QDELASLVIQFIKANY 271 (289)
Q Consensus 197 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~---~~~~~~~~~~gH~~~~~-~~~~~~~i~~fl~~~~ 271 (289)
..++++|+|+++|++|.++|++. .+.+++..+ ..+++.++|++|.+... ...+.+.+..||+.++
T Consensus 160 ----------~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L 229 (260)
T d1jfra_ 160 ----------WPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFI 229 (260)
T ss_dssp ----------CTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----------ccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHHh
Confidence 01237899999999999999865 555666654 35789999999997644 4678888999999988
Q ss_pred CCC
Q 022960 272 QKD 274 (289)
Q Consensus 272 ~~~ 274 (289)
...
T Consensus 230 ~~d 232 (260)
T d1jfra_ 230 DSD 232 (260)
T ss_dssp SCC
T ss_pred cCc
Confidence 754
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.93 E-value=1.8e-24 Score=164.62 Aligned_cols=233 Identities=15% Similarity=0.130 Sum_probs=149.7
Q ss_pred cceeeEEeeCCCCceEEEEEeecC------CCcEEEEEcCCCCC--CC-CcchHHHHHHHHHcCccEEEEccccCCCCCC
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG------SKQLVIVCHGFQST--KD-RIPMVNLAAALEREGISAFRFDFSGNGESEG 90 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~--~~-~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~ 90 (289)
++.+++.+...+|.++.++++.|. +-|+||++||+++. .. .+........++++||.|+.+|+||++....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~ 80 (258)
T d2bgra2 1 MPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGD 80 (258)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCH
T ss_pred CCceeEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcch
Confidence 467889999999999999887553 22799999995222 11 1223344556778899999999999875542
Q ss_pred Cccc---cch-HHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccccc
Q 022960 91 SFLY---GNY-RREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLG 162 (289)
Q Consensus 91 ~~~~---~~~-~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~ 162 (289)
.... ..+ ....+++.++++++.+. +.+++.++|+|+||.+++.++..+|+ +...+..++........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 155 (258)
T d2bgra2 81 KIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYD----- 155 (258)
T ss_dssp HHHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSB-----
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeeccccccccc-----
Confidence 2111 111 22356778888888766 34579999999999999999999999 56665555433221110
Q ss_pred chhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----C
Q 022960 163 LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI----P 238 (289)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~ 238 (289)
......... ... .....+..... +.......+ .++|+|++||++|..+|+..++++.+.+ .
T Consensus 156 ~~~~~~~~~--~~~---------~~~~~~~~~~~---~~~~~~~~~-~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~ 220 (258)
T d2bgra2 156 SVYTERYMG--LPT---------PEDNLDHYRNS---TVMSRAENF-KQVEYLLIHGTADDNVHFQQSAQISKALVDVGV 220 (258)
T ss_dssp HHHHHHHHC--CCS---------TTTTHHHHHHS---CSGGGGGGG-GGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTC
T ss_pred ccccchhcc--ccc---------chhhHHHhhcc---ccccccccc-ccCChheeeecCCCcccHHHHHHHHHHHHHCCC
Confidence 000000000 000 00000111110 111111111 1479999999999999999988877664 3
Q ss_pred CcEEEEEcCCCcccc--cCchHHHHHHHHHHHhhcC
Q 022960 239 NHKLHIIEGADHEFT--SHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 239 ~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~~~ 272 (289)
+++++++++++|.+. ...+++.+.+.+||++++.
T Consensus 221 ~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~l~ 256 (258)
T d2bgra2 221 DFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 256 (258)
T ss_dssp CCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHHhc
Confidence 579999999999864 3346789999999999875
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=1e-24 Score=156.22 Aligned_cols=170 Identities=17% Similarity=0.195 Sum_probs=128.4
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEEEEEe
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITAIIGH 124 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~l~G~ 124 (289)
+++|||+||++++... |..+++.|.++||.++.++.+|++.+..... ...+...+++.++++.+ +.++++++||
T Consensus 2 ~~PVv~vHG~~~~~~~--~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~-~~~~~l~~~i~~~~~~~---~~~~v~lvGH 75 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFN--FAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY-NNGPVLSRFVQKVLDET---GAKKVDIVAH 75 (179)
T ss_dssp CCCEEEECCTTCCGGG--GHHHHHHHHHTTCCGGGEEECCCSCTTCCHH-HHHHHHHHHHHHHHHHH---CCSCEEEEEE
T ss_pred CCCEEEECCCCCCHHH--HHHHHHHHHHcCCeEEEEecCCccccccccc-hhhhhHHHHHHHHHHhc---CCceEEEEee
Confidence 5678999999998854 9999999999999999999999998865432 22334444555554444 7789999999
Q ss_pred ChhHHHHHHHHHhC--CC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccch
Q 022960 125 SKGGNAVLLYASKY--ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDI 201 (289)
Q Consensus 125 S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (289)
||||.++..++.++ ++ |+++|+++++....... ....
T Consensus 76 SmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~------------------~l~~---------------------- 115 (179)
T d1ispa_ 76 SMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGK------------------ALPG---------------------- 115 (179)
T ss_dssp THHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB------------------CCCC----------------------
T ss_pred cCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchhh------------------hcCC----------------------
Confidence 99999999999887 44 99999998864321100 0000
Q ss_pred hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcccccCchHHHHHHHHHHHh
Q 022960 202 HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 202 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
......+|++.++|..|.++++..+ .+++++.+.+++.+|..+...+++.+.+.+||+.
T Consensus 116 ----~~~~~~~~~~~i~~~~D~~v~~~~~-----~l~~~~~~~~~~~~H~~l~~~~~v~~~i~~~L~~ 174 (179)
T d1ispa_ 116 ----TDPNQKILYTSIYSSADMIVMNYLS-----RLDGARNVQIHGVGHIGLLYSSQVNSLIKEGLNG 174 (179)
T ss_dssp ----SCTTCCCEEEEEEETTCSSSCHHHH-----CCBTSEEEEESSCCTGGGGGCHHHHHHHHHHHTT
T ss_pred ----cccccCceEEEEEecCCcccCchhh-----cCCCceEEEECCCCchhhccCHHHHHHHHHHHhc
Confidence 0002267999999999999998654 4688999999999999665567899999999864
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=5.6e-25 Score=167.41 Aligned_cols=221 Identities=17% Similarity=0.216 Sum_probs=137.3
Q ss_pred CCCceEEEEEeecC------CCcEEEEEcCCCCCC---CCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc---ccc-
Q 022960 30 SHGEKLVGILHETG------SKQLVIVCHGFQSTK---DRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL---YGN- 96 (289)
Q Consensus 30 ~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~---~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~- 96 (289)
.||.+|.++++.|. +.|+||++||+++.. ..+........|+++||.|+++|+||.+....... ...
T Consensus 10 ~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~~ 89 (258)
T d1xfda2 10 IDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRL 89 (258)
T ss_dssp ETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCT
T ss_pred eCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhccc
Confidence 48999998877553 237999999964321 22223334567889999999999998543321110 111
Q ss_pred hHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-----ccEEEEeccCCcccccccccccchhHhh
Q 022960 97 YRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNLKRGIEGRLGLGYLQR 168 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 168 (289)
.....+|+.++++++.++ +.++++++|+|+||.+++.++...++ ++..+.+++........ ......
T Consensus 90 g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 164 (258)
T d1xfda2 90 GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYA-----SAFSER 164 (258)
T ss_dssp TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSB-----HHHHHH
T ss_pred hhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeeccc-----cccccc
Confidence 123467899999999877 45689999999999999988776654 45555555533221110 000000
Q ss_pred hhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----CCcEEEE
Q 022960 169 IKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI----PNHKLHI 244 (289)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~ 244 (289)
.. ...... . ..+. .. ........ ..++|+|+++|+.|..+|++.+.++.+.+ .+.++++
T Consensus 165 ~~--~~~~~~---~-~~~~--~~--------s~~~~~~~-~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~ 227 (258)
T d1xfda2 165 YL--GLHGLD---N-RAYE--MT--------KVAHRVSA-LEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQI 227 (258)
T ss_dssp HH--CCCSSC---C-SSTT--TT--------CTHHHHTS-CCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred cc--cccccc---h-HHhh--cc--------chhhhhhh-hhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEE
Confidence 00 000000 0 0000 00 00000000 12689999999999999999888776654 3578999
Q ss_pred EcCCCccccc--CchHHHHHHHHHHHhhcC
Q 022960 245 IEGADHEFTS--HQDELASLVIQFIKANYQ 272 (289)
Q Consensus 245 ~~~~gH~~~~--~~~~~~~~i~~fl~~~~~ 272 (289)
+|+++|.+.. ....+.+.+.+||+++++
T Consensus 228 ~p~~~H~~~~~~~~~~~~~~~~~f~~~~~~ 257 (258)
T d1xfda2 228 YPDESHYFTSSSLKQHLYRSIINFFVECFR 257 (258)
T ss_dssp ETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred ECCCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999998653 234578899999998764
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.91 E-value=8.2e-24 Score=162.58 Aligned_cols=213 Identities=12% Similarity=0.115 Sum_probs=137.4
Q ss_pred CCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc---ccchHHHHHHHHHHHHHHHhcCCceE
Q 022960 43 GSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL---YGNYRREAEDLRAIVQDFCAKGRVIT 119 (289)
Q Consensus 43 ~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~~~~~~~d~~~~i~~l~~~~~~~~ 119 (289)
+.+|++||+||+.+.+..+.|..+++.|... +.|+++|+||||.+..... ..+++..++++.+.+.... +..++
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~~-~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~--~~~P~ 134 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQEE-RDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAA--GDAPV 134 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTTT-CCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHH--TTSCE
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCCC-ceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhc--CCCce
Confidence 4678999999964333224589999999875 9999999999998875443 3466777776655443222 56689
Q ss_pred EEEEeChhHHHHHHHHHhC----CC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhh
Q 022960 120 AIIGHSKGGNAVLLYASKY----ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLM 194 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~----p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (289)
+|+||||||.+|+.+|.+. +. |.++|++++...................+....... .....+.
T Consensus 135 vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~ 203 (283)
T d2h7xa1 135 VLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEP-----------MSDARLL 203 (283)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSC-----------CCHHHHH
T ss_pred EEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhHHHhhcccccc-----------cccHHHH
Confidence 9999999999999998864 34 999999987654433222222111111111111110 0111111
Q ss_pred hhh-ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC-cEEEEEcCCCcccc--cCchHHHHHHHHHHHhh
Q 022960 195 DRL-STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN-HKLHIIEGADHEFT--SHQDELASLVIQFIKAN 270 (289)
Q Consensus 195 ~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~ 270 (289)
... ............+++|+++++|++|..++.+....+.+.+++ .+++.++| +|+.+ ++++.+++.|.+||+..
T Consensus 204 a~~~~~~~~~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v~G-~H~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 204 AMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPG-DHFTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp HHHHHHHHHHSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEESS-CTTHHHHTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEEcC-CCcccccCCHHHHHHHHHHHHHhc
Confidence 000 001111112235689999999999999998888878777765 68999996 78843 44678999999999864
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.91 E-value=7.8e-23 Score=152.74 Aligned_cols=199 Identities=16% Similarity=0.153 Sum_probs=142.6
Q ss_pred ceeeEEeeCCCCceEEEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCcc-----
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFL----- 93 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~----- 93 (289)
..+.+++++.||.++.+++..|. +.|.||++|+..+... ....+++.|+++||.|+++|+.|.+.......
T Consensus 2 ~~e~v~~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~--~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~ 79 (233)
T d1dina_ 2 LTEGISIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNA--FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDER 79 (233)
T ss_dssp CCTTCCEECTTSCEECEEEECCSSSSEEEEEEECCTTBSCH--HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHH
T ss_pred cceEEEEEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCCH--HHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHH
Confidence 35678999999999999887664 6789999998777653 36788999999999999999977655432211
Q ss_pred ----------ccchHHHHHHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHHhCCCccEEEEeccCCcccccccccc
Q 022960 94 ----------YGNYRREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYNDISIVINISGRFNLKRGIEGRL 161 (289)
Q Consensus 94 ----------~~~~~~~~~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~ 161 (289)
..+......|+.++++++.... ..+|.++|+|+||.+++.++.. +.+.+.+.+.+.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~-~~~~~~~~~~~~~~~~------- 151 (233)
T d1dina_ 80 QREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAK-GYVDRAVGYYGVGLEK------- 151 (233)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHH-TCSSEEEEESCSCGGG-------
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeecccc-cccceecccccccccc-------
Confidence 1123445678889999987763 3489999999999999987765 4566655544321100
Q ss_pred cchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC---C
Q 022960 162 GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI---P 238 (289)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~ 238 (289)
..... .++++|+|+++|++|+.+|.+..+.+.+.+ +
T Consensus 152 ---------------------------------------~~~~~--~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~ 190 (233)
T d1dina_ 152 ---------------------------------------QLNKV--PEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP 190 (233)
T ss_dssp ---------------------------------------GGGGG--GGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT
T ss_pred ---------------------------------------chhhh--hccCCcceeeecccccCCCHHHHHHHHHHHhcCC
Confidence 00000 134789999999999999999888776544 3
Q ss_pred CcEEEEEcCCCcccccC-c--------hHHHHHHHHHHHhh
Q 022960 239 NHKLHIIEGADHEFTSH-Q--------DELASLVIQFIKAN 270 (289)
Q Consensus 239 ~~~~~~~~~~gH~~~~~-~--------~~~~~~i~~fl~~~ 270 (289)
+.++++++|++|.|... . ++.++.+.+||...
T Consensus 191 ~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~ 231 (233)
T d1dina_ 191 LLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAPL 231 (233)
T ss_dssp TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 57999999999987521 1 23467778888653
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=6.9e-23 Score=152.57 Aligned_cols=181 Identities=19% Similarity=0.134 Sum_probs=125.8
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCC---------C-----CC----CccccchHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGE---------S-----EG----SFLYGNYRREAEDLR 105 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~---------s-----~~----~~~~~~~~~~~~d~~ 105 (289)
..++||++||+|++..+ |..+...+...++.+++++-|.+.. + .. ...........+.+.
T Consensus 20 ~~~~VI~lHG~G~~~~~--~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~ 97 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHG--WAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIK 97 (229)
T ss_dssp CSEEEEEECCSSSCHHH--HHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHH--HHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHH
Confidence 45689999999998754 6667777766789999887653211 0 00 001112334455666
Q ss_pred HHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCccccccccc
Q 022960 106 AIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKG 182 (289)
Q Consensus 106 ~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (289)
.+++...+. +.++++++|+|+||.+|+.++.++|+ +++++.+++............
T Consensus 98 ~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~~~~~--------------------- 156 (229)
T d1fj2a_ 98 ALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGP--------------------- 156 (229)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSCSSC---------------------
T ss_pred HHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccccccccc---------------------
Confidence 666666554 46689999999999999999999999 999999988543221110000
Q ss_pred ccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----C--CcEEEEEcCCCcccccCc
Q 022960 183 KLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI----P--NHKLHIIEGADHEFTSHQ 256 (289)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~--~~~~~~~~~~gH~~~~~~ 256 (289)
......++|++++||++|.++|.+.++...+.+ . +++++.+++.||.+ .
T Consensus 157 ----------------------~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i---~ 211 (229)
T d1fj2a_ 157 ----------------------IGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSS---C 211 (229)
T ss_dssp ----------------------CCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSC---C
T ss_pred ----------------------cccccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCcc---C
Confidence 000012679999999999999998887665543 2 46888999999976 3
Q ss_pred hHHHHHHHHHHHhhcC
Q 022960 257 DELASLVIQFIKANYQ 272 (289)
Q Consensus 257 ~~~~~~i~~fl~~~~~ 272 (289)
.+..+.+.+||++++.
T Consensus 212 ~~~~~~~~~wL~~~Lp 227 (229)
T d1fj2a_ 212 QQEMMDVKQFIDKLLP 227 (229)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhHCc
Confidence 4567789999999873
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=1.7e-23 Score=156.39 Aligned_cols=206 Identities=12% Similarity=0.112 Sum_probs=123.3
Q ss_pred EeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCce
Q 022960 39 LHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVI 118 (289)
Q Consensus 39 ~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 118 (289)
+...+++++|||+||++++.. .|..+++.|. +|.|+++|++|+|. .++++.+.+..+. +..+
T Consensus 11 ~~~~~~~~~l~~lhg~~g~~~--~~~~la~~L~--~~~v~~~~~~g~~~------------~a~~~~~~i~~~~--~~~~ 72 (230)
T d1jmkc_ 11 IMNQDQEQIIFAFPPVLGYGL--MYQNLSSRLP--SYKLCAFDFIEEED------------RLDRYADLIQKLQ--PEGP 72 (230)
T ss_dssp EESTTCSEEEEEECCTTCCGG--GGHHHHHHCT--TEEEEEECCCCSTT------------HHHHHHHHHHHHC--CSSC
T ss_pred eecCCCCCeEEEEcCCCCCHH--HHHHHHHHCC--CCEEeccCcCCHHH------------HHHHHHHHHHHhC--CCCc
Confidence 567778999999999999995 4999999995 69999999999863 2455555555442 4567
Q ss_pred EEEEEeChhHHHHHHHHHhCCC----ccEEEEeccCCcccccccc-cccchhHhhhhhcCcccccccccccccccChhhh
Q 022960 119 TAIIGHSKGGNAVLLYASKYND----ISIVINISGRFNLKRGIEG-RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESL 193 (289)
Q Consensus 119 ~~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (289)
++|+||||||.+|+.+|.+.|+ +..++.+.+.......... .........+... ...............+
T Consensus 73 ~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 147 (230)
T d1jmkc_ 73 LTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNV-----NRDNEALNSEAVKHGL 147 (230)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHH-----TTTCSGGGSHHHHHHH
T ss_pred EEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhc-----cccccccccHHHHHHH
Confidence 9999999999999999988764 5555555543221111000 0000000000000 0000000000001111
Q ss_pred hhhhc---cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC-CCcEEEEEcCCCcccccC-c--hHHHHHHHHH
Q 022960 194 MDRLS---TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI-PNHKLHIIEGADHEFTSH-Q--DELASLVIQF 266 (289)
Q Consensus 194 ~~~~~---~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~--~~~~~~i~~f 266 (289)
..... ...........+++|+++++|++|..++.... .+.+.. .+.+++.+++ +|+.+.+ + +++++.|.+|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~i~~p~l~i~g~~D~~~~~~~~-~w~~~~~~~~~~~~i~g-~H~~ml~~~~~~~va~~I~~~ 225 (230)
T d1jmkc_ 148 KQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPEWLA-SWEEATTGAYRMKRGFG-THAEMLQGETLDRNAGILLEF 225 (230)
T ss_dssp HHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCTTEE-CSGGGBSSCEEEEECSS-CGGGTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcccccccccCcceeeeecCCcccchhHH-HHHHhccCCcEEEEEcC-CChhhcCCccHHHHHHHHHHH
Confidence 11111 11111122235689999999999999886544 344444 4678888985 9996643 3 6788888888
Q ss_pred HHh
Q 022960 267 IKA 269 (289)
Q Consensus 267 l~~ 269 (289)
|++
T Consensus 226 L~~ 228 (230)
T d1jmkc_ 226 LNT 228 (230)
T ss_dssp HTC
T ss_pred Hhh
Confidence 865
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.89 E-value=1.5e-21 Score=142.65 Aligned_cols=172 Identities=14% Similarity=0.142 Sum_probs=125.6
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCC---C------ccccchHHHHHHHHHHHHHHHhc
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEG---S------FLYGNYRREAEDLRAIVQDFCAK 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~---~------~~~~~~~~~~~d~~~~i~~l~~~ 114 (289)
++|+||++||++++... |..+++.+.+ ++.|++++.+..+.... . ..........+++..+++.+.+.
T Consensus 13 ~~P~vi~lHG~g~~~~~--~~~~~~~l~~-~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (202)
T d2h1ia1 13 SKPVLLLLHGTGGNELD--LLPLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKE 89 (202)
T ss_dssp TSCEEEEECCTTCCTTT--THHHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHH--HHHHHHHhcc-CCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 67999999999988865 7888988886 69999987654332211 0 01112233345566666666554
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccCh
Q 022960 115 ---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQ 190 (289)
Q Consensus 115 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (289)
+..+++++|+|+||.+++.++..+|+ +.+++++++.........
T Consensus 90 ~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 137 (202)
T d2h1ia1 90 YKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGMQL-------------------------------- 137 (202)
T ss_dssp TTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSCCC--------------------------------
T ss_pred ccccccceeeecccccchHHHHHHHhccccccceeeecCCCCcccccc--------------------------------
Confidence 56699999999999999999999999 999998887543211000
Q ss_pred hhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcccccCchHHHHHHHHH
Q 022960 191 ESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEFTSHQDELASLVIQF 266 (289)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~i~~f 266 (289)
......|+++++|++|+++|++.++.+.+.+. +.+++.+++ ||.+ ..+..+.+.+|
T Consensus 138 ----------------~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~---~~~~~~~~~~w 197 (202)
T d2h1ia1 138 ----------------ANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTMHWENR-GHQL---TMGEVEKAKEW 197 (202)
T ss_dssp ----------------CCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESS-TTSC---CHHHHHHHHHH
T ss_pred ----------------cccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEEEEECC-CCcC---CHHHHHHHHHH
Confidence 00226799999999999999999888887764 368888986 8975 46678889999
Q ss_pred HHhh
Q 022960 267 IKAN 270 (289)
Q Consensus 267 l~~~ 270 (289)
|++.
T Consensus 198 l~k~ 201 (202)
T d2h1ia1 198 YDKA 201 (202)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9875
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.87 E-value=2.8e-21 Score=141.39 Aligned_cols=175 Identities=13% Similarity=0.149 Sum_probs=124.6
Q ss_pred ecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCC---------ccccchHHHHHHHHHHHHHH
Q 022960 41 ETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGS---------FLYGNYRREAEDLRAIVQDF 111 (289)
Q Consensus 41 ~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~---------~~~~~~~~~~~d~~~~i~~l 111 (289)
..++.|+||++||++++.+. |..+.+.|.+ ++.|+.++.+..+..... ....+.....+.+..+++..
T Consensus 13 ~~~~~P~vi~lHG~G~~~~~--~~~~~~~l~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (203)
T d2r8ba1 13 GVAGAPLFVLLHGTGGDENQ--FFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKAN 89 (203)
T ss_dssp CCTTSCEEEEECCTTCCHHH--HHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHH--HHHHHHHhcc-CCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHh
Confidence 34478999999999998754 7788888876 588888876644333211 01112233344555555443
Q ss_pred Hhc-CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccC
Q 022960 112 CAK-GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVT 189 (289)
Q Consensus 112 ~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (289)
... +.++++++|+|+||.+++.++..+|+ +.+++++++........
T Consensus 90 ~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-------------------------------- 137 (203)
T d2r8ba1 90 REHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPKI-------------------------------- 137 (203)
T ss_dssp HHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCCC--------------------------------
T ss_pred hhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccccc--------------------------------
Confidence 332 77899999999999999999999999 89999998854321100
Q ss_pred hhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcccccCchHHHHHHHH
Q 022960 190 QESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEFTSHQDELASLVIQ 265 (289)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~i~~ 265 (289)
.......|++++||++|+++|.+.++++.+.+. +++++.+++ ||.+ +.+..+.+.+
T Consensus 138 ----------------~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~---~~~~~~~~~~ 197 (203)
T d2r8ba1 138 ----------------SPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEI---RSGEIDAVRG 197 (203)
T ss_dssp ----------------CCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSC---CHHHHHHHHH
T ss_pred ----------------ccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcC---CHHHHHHHHH
Confidence 000126799999999999999999988887764 368899986 7986 3456778999
Q ss_pred HHHhh
Q 022960 266 FIKAN 270 (289)
Q Consensus 266 fl~~~ 270 (289)
||.++
T Consensus 198 wl~~~ 202 (203)
T d2r8ba1 198 FLAAY 202 (203)
T ss_dssp HHGGG
T ss_pred HHHhc
Confidence 99764
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.87 E-value=8.2e-21 Score=139.28 Aligned_cols=177 Identities=16% Similarity=0.092 Sum_probs=120.1
Q ss_pred EEEEeecC--CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccC--C--CCCC--Ccccc---chHHHHHHH
Q 022960 36 VGILHETG--SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGN--G--ESEG--SFLYG---NYRREAEDL 104 (289)
Q Consensus 36 ~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~--G--~s~~--~~~~~---~~~~~~~d~ 104 (289)
.++...++ ++|+||++||++++... |..+.+.|.+ ++.+++++.+.. | .... ..... .....++++
T Consensus 12 ~~~~~~~~~~~~p~vv~lHG~g~~~~~--~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 88 (209)
T d3b5ea1 12 PYRLLGAGKESRECLFLLHGSGVDETT--LVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAF 88 (209)
T ss_dssp CEEEESTTSSCCCEEEEECCTTBCTTT--THHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHH
T ss_pred eeEecCCCCCCCCEEEEEcCCCCCHHH--HHHHHHHhcc-CcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHH
Confidence 34444444 67999999999999865 7889999886 488888865421 1 1100 01111 223334556
Q ss_pred HHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccchhHhhhhhcCccccccc
Q 022960 105 RAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNK 180 (289)
Q Consensus 105 ~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (289)
.++|+.+.++ +.++++++|||+||.+++.++..+|+ ++++++++|........
T Consensus 89 ~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~~~----------------------- 145 (209)
T d3b5ea1 89 AAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHVP----------------------- 145 (209)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSCC-----------------------
T ss_pred HHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccccc-----------------------
Confidence 6666666544 56789999999999999999999999 99999998854321000
Q ss_pred ccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC----CCcEEEEEcCCCcccccCc
Q 022960 181 KGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI----PNHKLHIIEGADHEFTSHQ 256 (289)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~ 256 (289)
.....++|+++++|++|++++ +.++++.+.+ -+++++++++ ||.+ .
T Consensus 146 -------------------------~~~~~~~p~~~~~G~~D~~~~-~~~~~~~~~l~~~G~~v~~~~~~g-gH~i---~ 195 (209)
T d3b5ea1 146 -------------------------ATDLAGIRTLIIAGAADETYG-PFVPALVTLLSRHGAEVDARIIPS-GHDI---G 195 (209)
T ss_dssp -------------------------CCCCTTCEEEEEEETTCTTTG-GGHHHHHHHHHHTTCEEEEEEESC-CSCC---C
T ss_pred -------------------------ccccccchheeeeccCCCccC-HHHHHHHHHHHHCCCCeEEEEECC-CCCC---C
Confidence 000126799999999999987 4444444443 2468899987 7987 3
Q ss_pred hHHHHHHHHHHH
Q 022960 257 DELASLVIQFIK 268 (289)
Q Consensus 257 ~~~~~~i~~fl~ 268 (289)
++..+.+.+||.
T Consensus 196 ~~~~~~~~~wl~ 207 (209)
T d3b5ea1 196 DPDAAIVRQWLA 207 (209)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC
Confidence 455677889985
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.87 E-value=6.3e-21 Score=144.03 Aligned_cols=194 Identities=15% Similarity=0.090 Sum_probs=131.2
Q ss_pred eEEeeCCCCceEEEEEeecCCCcEEEEEcCCCCCC-CCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHH
Q 022960 24 RVVIPNSHGEKLVGILHETGSKQLVIVCHGFQSTK-DRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAE 102 (289)
Q Consensus 24 ~~~~~~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 102 (289)
++.+-..+..++..+.-...+.|+||++||++-.. ....+..++..|+++||.|+.+|+|..+. ..+....+
T Consensus 41 dv~Yg~~~~~~lDiy~P~~~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~-------~~~p~~~~ 113 (261)
T d2pbla1 41 NLSYGEGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPE-------VRISEITQ 113 (261)
T ss_dssp EEESSSSTTCEEEEECCSSSCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTT-------SCHHHHHH
T ss_pred CcCCCCCcCeEEEEeccCCCCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeeccccccccc-------ccCchhHH
Confidence 44444444445553322223679999999975322 11336678899999999999999995432 35677889
Q ss_pred HHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCC-------CccEEEEeccCCcccccccccccchhHhhhhhcCcc
Q 022960 103 DLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYN-------DISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFI 175 (289)
Q Consensus 103 d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-------~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (289)
|+.++++++.++..++++|+|||.||+++..++.... .+++++.+++..+............
T Consensus 114 d~~~a~~~~~~~~~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 182 (261)
T d2pbla1 114 QISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNEK----------- 182 (261)
T ss_dssp HHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTHHH-----------
T ss_pred HHHHHHHHHHhcccCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhhhhccc-----------
Confidence 9999999998886789999999999999987765432 2788999988777643221111000
Q ss_pred cccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEEEEEcCCCcc
Q 022960 176 DVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKLHIIEGADHE 251 (289)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 251 (289)
.....+..... ...... .+..+|+++++|++|..++.++++.+.+.+ +++.+.+++.+|+
T Consensus 183 ----------~~~~~~~~~~~---SP~~~~--~~~~~P~li~~G~~D~~~~~~qs~~~~~~l-~~~~~~~~~~~HF 242 (261)
T d2pbla1 183 ----------FKMDADAAIAE---SPVEMQ--NRYDAKVTVWVGGAERPAFLDQAIWLVEAW-DADHVIAFEKHHF 242 (261)
T ss_dssp ----------HCCCHHHHHHT---CGGGCC--CCCSCEEEEEEETTSCHHHHHHHHHHHHHH-TCEEEEETTCCTT
T ss_pred ----------ccCCHHHHHHh---Cchhhc--ccCCCeEEEEEecCCCchHHHHHHHHHHHh-CCCceEeCCCCch
Confidence 00111111110 011111 134789999999999988889999998887 5788899999997
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.87 E-value=1.7e-20 Score=142.77 Aligned_cols=203 Identities=15% Similarity=0.186 Sum_probs=119.1
Q ss_pred ecCCCcEEEEEcCCCC---CCCCcchHHHH----HHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHh
Q 022960 41 ETGSKQLVIVCHGFQS---TKDRIPMVNLA----AALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCA 113 (289)
Q Consensus 41 ~~~~~~~iv~~hG~~~---~~~~~~~~~~~----~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~ 113 (289)
..+++|+||++||++- ......+..+. +.+.+.||.|+.+|+|..++. .+....+|+.++++++.+
T Consensus 27 ~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~-------~~~~~~~d~~~~~~~l~~ 99 (263)
T d1vkha_ 27 SQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI-------TNPRNLYDAVSNITRLVK 99 (263)
T ss_dssp CTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS-------CTTHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcch-------hhhHHHHhhhhhhhcccc
Confidence 3457899999999652 11112244444 444567999999999965443 234567888888888866
Q ss_pred c-CCceEEEEEeChhHHHHHHHHHhCCC------------------ccEEEEeccCCcccccccccccchhHhhhhhcCc
Q 022960 114 K-GRVITAIIGHSKGGNAVLLYASKYND------------------ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGF 174 (289)
Q Consensus 114 ~-~~~~~~l~G~S~Gg~~a~~~a~~~p~------------------v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (289)
. +..+++|+|||+||.+++.++...++ +...+..++..+.......... ...+....+
T Consensus 100 ~~~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 176 (263)
T d1vkha_ 100 EKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPE---YDCFTRLAF 176 (263)
T ss_dssp HHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGG---GHHHHHHHC
T ss_pred cccccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchhhhhhccc---cchhhhccc
Confidence 6 77899999999999999998876543 1222233332221111000000 000000000
Q ss_pred ccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCc
Q 022960 175 IDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADH 250 (289)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH 250 (289)
.. ....+........... .. ...++.+|+++++|++|+++|++.++.+.+.++ +++++++++++|
T Consensus 177 ~~-----~~~~~~~~~~~~~~~~----~~--~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~~~H 245 (263)
T d1vkha_ 177 PD-----GIQMYEEEPSRVMPYV----KK--ALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLH 245 (263)
T ss_dssp TT-----CGGGCCCCHHHHHHHH----HH--HHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSG
T ss_pred cc-----ccccccccccccCccc----cc--cccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEECCCCc
Confidence 00 0000000000000000 00 111347899999999999999999888877653 579999999999
Q ss_pred ccccCchHHHHHHH
Q 022960 251 EFTSHQDELASLVI 264 (289)
Q Consensus 251 ~~~~~~~~~~~~i~ 264 (289)
......+++.+.|.
T Consensus 246 ~~~~~~~~~~~~i~ 259 (263)
T d1vkha_ 246 NDVYKNGKVAKYIF 259 (263)
T ss_dssp GGGGGCHHHHHHHH
T ss_pred hhhhcChHHHHHHH
Confidence 85545566655554
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=3.3e-22 Score=153.52 Aligned_cols=107 Identities=14% Similarity=0.155 Sum_probs=77.2
Q ss_pred CCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHH
Q 022960 29 NSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV 108 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 108 (289)
.++|.++...-...+++++|||+||++++... |..+++.| ++.|+++|+||+|.+. ++++.+++..+.+
T Consensus 9 ~~~~~~l~~l~~~~~~~~Pl~l~Hg~~gs~~~--~~~l~~~L---~~~v~~~d~~g~~~~~------~~~~~a~~~~~~~ 77 (286)
T d1xkta_ 9 NPEGPTLMRLNSVQSSERPLFLVHPIEGSTTV--FHSLASRL---SIPTYGLQCTRAAPLD------SIHSLAAYYIDCI 77 (286)
T ss_dssp CTTSCSEEECCCCCCCSCCEEEECCTTCCCGG--GHHHHHTC---SSCEEEECCCTTSCCS------CHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCCCCCeEEEECCCCccHHH--HHHHHHHc---CCeEEEEeCCCCCCCC------CHHHHHHHHHHHH
Confidence 35565565333344567789999999999954 88888877 5899999999999875 3456666665555
Q ss_pred HHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEec
Q 022960 109 QDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINIS 148 (289)
Q Consensus 109 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~ 148 (289)
..+. +.++++|+||||||.+|+.+|.++|+ +.++++++
T Consensus 78 ~~~~--~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 78 RQVQ--PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp HHHC--CSSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred HHhc--CCCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 4432 55689999999999999999999988 77766554
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.85 E-value=1.1e-23 Score=165.02 Aligned_cols=236 Identities=13% Similarity=0.062 Sum_probs=126.9
Q ss_pred EEEEEeec--CCCcEEEEEcCCCCCCCCcc-----hHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHH
Q 022960 35 LVGILHET--GSKQLVIVCHGFQSTKDRIP-----MVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAI 107 (289)
Q Consensus 35 l~~~~~~~--~~~~~iv~~hG~~~~~~~~~-----~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~ 107 (289)
+++.++.| +++++|||+||++.+...|. +..+++.+.++||+|+++|+||||.|.......+...+.+++.+.
T Consensus 46 ~~v~~~~p~~~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~ 125 (318)
T d1qlwa_ 46 MYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASS 125 (318)
T ss_dssp EEEEEEEETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGG
T ss_pred EEEEEECCCCCCCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHH
Confidence 44444443 45677999999999886521 123688999999999999999999998765444444444444444
Q ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC--ccEEEEeccCCcccccccc-cccchhHhhhhh-cCccccc--ccc
Q 022960 108 VQDFCAKGRVITAIIGHSKGGNAVLLYASKYND--ISIVINISGRFNLKRGIEG-RLGLGYLQRIKQ-NGFIDVR--NKK 181 (289)
Q Consensus 108 i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~--~~~ 181 (289)
++.+.. ...+..++|||+||.++..++..... ...+++.++.......... ............ ....... ...
T Consensus 126 l~~~~~-~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (318)
T d1qlwa_ 126 LPDLFA-AGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQS 204 (318)
T ss_dssp SCCCBC-CCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHTSEEEEEEGGG
T ss_pred HHHHhh-cccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhhhccccchhhhcc
Confidence 443311 23456788999999998887766544 2222222222211111100 000000000000 0000000 000
Q ss_pred ccccccc---Chhhhhhhhc----cchhhhhcccccCceEEEEEeCCCCccChhhH---------HHHHhhCCCcEEEEE
Q 022960 182 GKLEYRV---TQESLMDRLS----TDIHAACHMICQDCRVLTIHGTKDKMVPAEDA---------LEFDKFIPNHKLHII 245 (289)
Q Consensus 182 ~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~---------~~~~~~~~~~~~~~~ 245 (289)
....+.. .......... ...........+++|+|+++|++|.++|.... ..+.+...+++++.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~l 284 (318)
T d1qlwa_ 205 GIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSL 284 (318)
T ss_dssp TTHHHHHHHHCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred cchhhhhhhhhhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 0000000 0000000000 00000111123589999999999999985432 223344467888886
Q ss_pred c-----CCCcccc-cCc-hHHHHHHHHHHHhhc
Q 022960 246 E-----GADHEFT-SHQ-DELASLVIQFIKANY 271 (289)
Q Consensus 246 ~-----~~gH~~~-~~~-~~~~~~i~~fl~~~~ 271 (289)
| |+||+++ +.+ +++++.|.+||+++.
T Consensus 285 p~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 285 PALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 317 (318)
T ss_dssp GGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred cccccCCCcCccccCcCHHHHHHHHHHHHHhcc
Confidence 5 5779976 444 789999999999864
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.84 E-value=4.7e-20 Score=144.62 Aligned_cols=232 Identities=18% Similarity=0.263 Sum_probs=141.6
Q ss_pred EEEEEeec---CCCcEEEEEcCCCCCCCC-cchHHHH---HHHHHcCccEEEEccccCCCCCCC----------------
Q 022960 35 LVGILHET---GSKQLVIVCHGFQSTKDR-IPMVNLA---AALEREGISAFRFDFSGNGESEGS---------------- 91 (289)
Q Consensus 35 l~~~~~~~---~~~~~iv~~hG~~~~~~~-~~~~~~~---~~l~~~G~~v~~~d~~G~G~s~~~---------------- 91 (289)
|.|..++. .+.++||++|++.++... .+|..++ +.|....|.||++|..|.|.++..
T Consensus 31 laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~yg~ 110 (376)
T d2vata1 31 VAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGA 110 (376)
T ss_dssp EEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGG
T ss_pred EEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCcccc
Confidence 44444543 356799999999988753 2244332 233334599999999987654311
Q ss_pred -ccccchHHHHHHHHHHHHHHHhcCCceE-EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccccc-------c
Q 022960 92 -FLYGNYRREAEDLRAIVQDFCAKGRVIT-AIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGR-------L 161 (289)
Q Consensus 92 -~~~~~~~~~~~d~~~~i~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~-------~ 161 (289)
++..++.++++-...++++| +++++ .|+|.||||+.|+.+|..+|+ |+++|.+++........... +
T Consensus 111 ~FP~~ti~D~v~aq~~ll~~L---GI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~~~~~~ai 187 (376)
T d2vata1 111 KFPRTTIRDDVRIHRQVLDRL---GVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCI 187 (376)
T ss_dssp GCCCCCHHHHHHHHHHHHHHH---TCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHH
T ss_pred cCCcchhHHHHHHHHHHHHHh---CcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHHHHHHHHh
Confidence 11235556666666677777 99998 799999999999999999999 99999998765432110000 0
Q ss_pred -------------------cchhHhhh----------hhcCcccccccc-cc----------------------------
Q 022960 162 -------------------GLGYLQRI----------KQNGFIDVRNKK-GK---------------------------- 183 (289)
Q Consensus 162 -------------------~~~~~~~~----------~~~~~~~~~~~~-~~---------------------------- 183 (289)
+-...+.+ ....+....... +.
T Consensus 188 ~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
T d2vata1 188 YDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEA 267 (376)
T ss_dssp HHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGG
T ss_pred hccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccccccccccccchhH
Confidence 00000000 000000000000 00
Q ss_pred -----------cccccChhhhhhh---h-ccchhh------hhcccccCceEEEEEeCCCCccChhhHHHHHhhCCCcEE
Q 022960 184 -----------LEYRVTQESLMDR---L-STDIHA------ACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPNHKL 242 (289)
Q Consensus 184 -----------~~~~~~~~~~~~~---~-~~~~~~------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 242 (289)
...+++...+... + ..+... .....+|++|+|+|.++.|.++|++..+++++.++++++
T Consensus 268 vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l~~a~~ 347 (376)
T d2vata1 268 VSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPNSRL 347 (376)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTTEEE
T ss_pred HHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhcCCCeE
Confidence 0000000111000 0 000000 011235799999999999999999999999999999999
Q ss_pred EEEc-CCCcc-cccCchHHHHHHHHHHHh
Q 022960 243 HIIE-GADHE-FTSHQDELASLVIQFIKA 269 (289)
Q Consensus 243 ~~~~-~~gH~-~~~~~~~~~~~i~~fl~~ 269 (289)
.+++ ..||. +..+.+++.+.|.+||++
T Consensus 348 ~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 348 CVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp EECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred EEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 9998 47897 557788999999999964
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.84 E-value=4.1e-20 Score=146.30 Aligned_cols=131 Identities=15% Similarity=0.096 Sum_probs=103.6
Q ss_pred eeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCCC--cchHHHHHHHHHcCccEEEEccccCCCCCCCccccc
Q 022960 22 RRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKDR--IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGN 96 (289)
Q Consensus 22 ~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 96 (289)
.+++.|+..||++|.+.++.|. +-|+||+.||++..... ..+....+.|+++||.|+.+|.||+|.|.+.....
T Consensus 5 ~~~v~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~- 83 (347)
T d1ju3a2 5 ASNVMVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPH- 83 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTT-
T ss_pred EeCeEEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccc-
Confidence 4679999999999999987664 45789999998764321 01233457889999999999999999999876443
Q ss_pred hHHHHHHHHHHHHHHHhcC--CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 97 YRREAEDLRAIVQDFCAKG--RVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 97 ~~~~~~d~~~~i~~l~~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
.....|..++++++..+. ..+|.++|+|+||.+++.+|...|. +++++...+..+..
T Consensus 84 -~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~~ 143 (347)
T d1ju3a2 84 -VDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 143 (347)
T ss_dssp -TTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred -cchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchhh
Confidence 223468888999998872 2589999999999999999998887 99999988877643
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.84 E-value=1.3e-19 Score=143.57 Aligned_cols=248 Identities=17% Similarity=0.075 Sum_probs=145.2
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCC---CCCcchHHHHHHHHHcCccEEEEccccCCCCCC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQST---KDRIPMVNLAAALEREGISAFRFDFSGNGESEG 90 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~---~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~ 90 (289)
.++..++.++++.||..+..+++.|. +.|+||++||+|.. .....+..++..|++.|+.|+.+|||..+...
T Consensus 75 ~~v~~~~~~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~- 153 (358)
T d1jkma_ 75 DDVETSTETILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAE- 153 (358)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETT-
T ss_pred CCccEEEEEEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeeccccccc-
Confidence 45778888899999999998877543 45799999998653 22223567888999999999999999754332
Q ss_pred CccccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHhC-----CC-ccEEEEeccCCccccccccc
Q 022960 91 SFLYGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASKY-----ND-ISIVINISGRFNLKRGIEGR 160 (289)
Q Consensus 91 ~~~~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~~~~~~~~~~ 160 (289)
....+....+|+.++++|+.++ +.++++|+|+|.||++++.++... .. +.++++..|...........
T Consensus 154 --pe~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 231 (358)
T d1jkma_ 154 --GHHPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHE 231 (358)
T ss_dssp --EECCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHH
T ss_pred --ccCCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccccCccch
Confidence 1223566788999999988664 678999999999999998776542 22 78888888866543222111
Q ss_pred ccchhHhhhhhcCcccccccccccc---cccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhh-
Q 022960 161 LGLGYLQRIKQNGFIDVRNKKGKLE---YRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKF- 236 (289)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~- 236 (289)
......................... +........+.............+--.|+++++|+.|.+. ..+..++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l~--~e~~~~~~~L 309 (358)
T d1jkma_ 232 RRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPLR--DEGIAFARRL 309 (358)
T ss_dssp HHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTTH--HHHHHHHHHH
T ss_pred hhcccccchhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhccCCCCEEEEECCCCCCH--HHHHHHHHHH
Confidence 1000000000000000000000000 0000000000000000000000111359999999999765 344444444
Q ss_pred ---CCCcEEEEEcCCCcccc---cC-----chHHHHHHHHHHHhh
Q 022960 237 ---IPNHKLHIIEGADHEFT---SH-----QDELASLVIQFIKAN 270 (289)
Q Consensus 237 ---~~~~~~~~~~~~gH~~~---~~-----~~~~~~~i~~fl~~~ 270 (289)
-..+++++++|.+|.+. .. .+++.+.|..|+.+.
T Consensus 310 ~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~ 354 (358)
T d1jkma_ 310 ARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 354 (358)
T ss_dssp HHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHH
Confidence 34589999999999742 11 145778888898764
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.84 E-value=3.7e-19 Score=131.23 Aligned_cols=177 Identities=15% Similarity=0.073 Sum_probs=115.2
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEcccc--------CCCCC-------CCccccc---hHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSG--------NGESE-------GSFLYGN---YRREAED 103 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G--------~G~s~-------~~~~~~~---~~~~~~d 103 (289)
.+++||++||+|++... +..+.+.|.+. ++.+++++-|. ..... ......+ .......
T Consensus 13 ~~~~Vi~lHG~G~~~~~--~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 90 (218)
T d1auoa_ 13 ADACVIWLHGLGADRYD--FMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKM 90 (218)
T ss_dssp CSEEEEEECCTTCCTTT--THHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCChhh--HHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHHH
Confidence 46799999999999875 78888888765 34556554331 10000 0001111 1222233
Q ss_pred HHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhC-CC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccc
Q 022960 104 LRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKY-ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRN 179 (289)
Q Consensus 104 ~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (289)
+.++++...+. +.++++++|+|+||.+++.++... +. +.+++.+++...........
T Consensus 91 v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~------------------- 151 (218)
T d1auoa_ 91 VTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELEL------------------- 151 (218)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTCCC-------------------
T ss_pred HHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccccccc-------------------
Confidence 44455544333 457999999999999999887655 44 89999988753221100000
Q ss_pred cccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcCCCcccccC
Q 022960 180 KKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEGADHEFTSH 255 (289)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~ 255 (289)
. .. ..++|++++||++|.++|.+.++++++.+. +++++.++ +||.+
T Consensus 152 --------------------~----~~--~~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i--- 201 (218)
T d1auoa_ 152 --------------------S----AS--QQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEV--- 201 (218)
T ss_dssp --------------------C----HH--HHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSC---
T ss_pred --------------------c----hh--ccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCcc---
Confidence 0 00 116799999999999999998887776653 46888887 68975
Q ss_pred chHHHHHHHHHHHhhc
Q 022960 256 QDELASLVIQFIKANY 271 (289)
Q Consensus 256 ~~~~~~~i~~fl~~~~ 271 (289)
.++..+.+.+||.+.+
T Consensus 202 ~~~~~~~i~~wl~~~l 217 (218)
T d1auoa_ 202 LPQEIHDIGAWLAARL 217 (218)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhc
Confidence 3566788999998876
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.84 E-value=2e-19 Score=143.55 Aligned_cols=136 Identities=16% Similarity=0.168 Sum_probs=105.0
Q ss_pred cccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCCC-----Cc----chHHHHHHHHHcCccEEEEccccC
Q 022960 18 PVVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTKD-----RI----PMVNLAAALEREGISAFRFDFSGN 85 (289)
Q Consensus 18 ~~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~~-----~~----~~~~~~~~l~~~G~~v~~~d~~G~ 85 (289)
.....+++.++..||++|.+.++.|. +-|+||+.|+++.... .. .+....+.|+++||.|+.+|.||+
T Consensus 20 ~~~~~~~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~ 99 (381)
T d1mpxa2 20 NDYIKREVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGK 99 (381)
T ss_dssp CSEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTS
T ss_pred cCceEEEEEEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCcc
Confidence 34567899999999999999887654 4579999998764211 01 122355789999999999999999
Q ss_pred CCCCCCccccc---------hHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 86 GESEGSFLYGN---------YRREAEDLRAIVQDFCAKG---RVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 86 G~s~~~~~~~~---------~~~~~~d~~~~i~~l~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
|.|.+...... ..+.++|..++++++.++. ..+|.++|+|+||.+++.+|...|. ++++|..++..+
T Consensus 100 g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 100 YGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp TTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred CCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 99987643211 1235789999999997762 3489999999999999998988887 999999988765
Q ss_pred c
Q 022960 153 L 153 (289)
Q Consensus 153 ~ 153 (289)
.
T Consensus 180 ~ 180 (381)
T d1mpxa2 180 G 180 (381)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.83 E-value=2.8e-19 Score=139.61 Aligned_cols=237 Identities=12% Similarity=0.055 Sum_probs=133.3
Q ss_pred CcccceeeEEeeCCCCc-eEEEEEeecC----CCcEEEEEcCCCCCCCC-cchHHHHHHHHH-cCccEEEEccccCCCCC
Q 022960 17 DPVVQRRRVVIPNSHGE-KLVGILHETG----SKQLVIVCHGFQSTKDR-IPMVNLAAALER-EGISAFRFDFSGNGESE 89 (289)
Q Consensus 17 ~~~~~~~~~~~~~~~g~-~l~~~~~~~~----~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~ 89 (289)
..++..+++.+++.+|. .+..+++.|. +.|+||++||+|....+ .....+...++. .||.|+.+|+|...+.
T Consensus 45 ~~~v~~~~~~~~~~~g~~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~- 123 (317)
T d1lzla_ 45 FDGVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPET- 123 (317)
T ss_dssp CTTEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTS-
T ss_pred CCCceEEEEEEecCCCCceEEEEEECCCCCCCCCcEEEEecCcccccccccccchHHHhHHhhcCCccccccccccccc-
Confidence 34667789999988885 5777666553 45789999997632211 235566667765 5999999999975443
Q ss_pred CCccccchHHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCCC-----ccEEEEeccCCccccccc
Q 022960 90 GSFLYGNYRREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYND-----ISIVINISGRFNLKRGIE 158 (289)
Q Consensus 90 ~~~~~~~~~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~~~~~~ 158 (289)
.+....+|+.+++.++..+ +.++|+++|+|.||++++.++...++ ....++..+.........
T Consensus 124 ------~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (317)
T d1lzla_ 124 ------TFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETV 197 (317)
T ss_dssp ------CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSH
T ss_pred ------cccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhccccccccccccccccccccccc
Confidence 2345567777777777554 34689999999999999988765421 334443333222111100
Q ss_pred c---cccc-----hhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhH
Q 022960 159 G---RLGL-----GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDA 230 (289)
Q Consensus 159 ~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 230 (289)
. .... ................ ...... ........ .........|+++++|++|.++ ..+
T Consensus 198 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~--~~~~~~~~pp~li~~g~~D~l~--~~~ 265 (317)
T d1lzla_ 198 SMTNFVDTPLWHRPNAILSWKYYLGESYS--GPEDPD------VSIYAAPS--RATDLTGLPPTYLSTMELDPLR--DEG 265 (317)
T ss_dssp HHHHCSSCSSCCHHHHHHHHHHHHCTTCC--CTTCSC------CCTTTCGG--GCSCCTTCCCEEEEEETTCTTH--HHH
T ss_pred ccccccccchhhhhhhHHHHhhhcccccc--CCCCch------hccccCch--hhhhccCCCCeEEEECCCCCCH--HHH
Confidence 0 0000 0000000000000000 000000 00000000 0000112479999999999654 455
Q ss_pred HHHHhhC----CCcEEEEEcCCCccccc--C---chHHHHHHHHHHHhhcC
Q 022960 231 LEFDKFI----PNHKLHIIEGADHEFTS--H---QDELASLVIQFIKANYQ 272 (289)
Q Consensus 231 ~~~~~~~----~~~~~~~~~~~gH~~~~--~---~~~~~~~i~~fl~~~~~ 272 (289)
+.+++.+ ..+++++++|++|.+.. . ..+..+.+.+||.+.++
T Consensus 266 ~~~~~~L~~~G~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lr 316 (317)
T d1lzla_ 266 IEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 316 (317)
T ss_dssp HHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCEEEEEECcCccCCcccCCchHHHHHHHHHHHHHHHHhC
Confidence 5555444 45899999999997542 2 13566778889888764
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.82 E-value=7.8e-18 Score=128.90 Aligned_cols=244 Identities=17% Similarity=0.102 Sum_probs=143.3
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC------CCcEEEEEcCCCCCCCCc-chHHHHHHHHHcCccEEEEccccCCCCCCC
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG------SKQLVIVCHGFQSTKDRI-PMVNLAAALEREGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 91 (289)
+.+.+++++++.||.+|.++++.|. +.|+||++||+++..... +.......+...++.+...+.++.......
T Consensus 4 ~y~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (280)
T d1qfma2 4 DYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGET 83 (280)
T ss_dssp GEEEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHH
T ss_pred cCEEEEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchh
Confidence 3456889999999999999877653 458999999976543322 233344455555677777776654432111
Q ss_pred ----ccccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc
Q 022960 92 ----FLYGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL 163 (289)
Q Consensus 92 ----~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~ 163 (289)
..........++........... .....+++|.|.||..+...+...++ +++++...+..+...........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (280)
T d1qfma2 84 WHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGH 163 (280)
T ss_dssp HHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGG
T ss_pred hhhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhccccccc
Confidence 11112233344444444444333 34578999999999999999999988 77777777766543322211111
Q ss_pred hhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccc-cCceEEEEEeCCCCccChhhHHHHHhhCC----
Q 022960 164 GYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMIC-QDCRVLTIHGTKDKMVPAEDALEFDKFIP---- 238 (289)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---- 238 (289)
........... ......................+ ...|+|++||++|..||+.+++++.+.+.
T Consensus 164 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~ 231 (280)
T d1qfma2 164 AWTTDYGCSDS------------KQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVG 231 (280)
T ss_dssp GGHHHHCCTTS------------HHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTT
T ss_pred cceecccCCCc------------ccccccccccccccccchhhhcccCCCceEEeecccCCCCCHHHHHHHHHHHHHhhh
Confidence 11100000000 00000000000000000000111 14489999999999999999988877761
Q ss_pred -------CcEEEEEcCCCcccccCch---HHHHHHHHHHHhhcCCC
Q 022960 239 -------NHKLHIIEGADHEFTSHQD---ELASLVIQFIKANYQKD 274 (289)
Q Consensus 239 -------~~~~~~~~~~gH~~~~~~~---~~~~~i~~fl~~~~~~~ 274 (289)
.+++++++++||.+..... +....+.+||+++++..
T Consensus 232 ~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~~ 277 (280)
T d1qfma2 232 RSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNID 277 (280)
T ss_dssp TSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 3689999999998753322 34556889999998754
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.82 E-value=2.5e-19 Score=139.51 Aligned_cols=234 Identities=16% Similarity=0.222 Sum_probs=139.9
Q ss_pred ceEEEEEeec---CCCcEEEEEcCCCCCCCCc-------chHHHH---HHHHHcCccEEEEccccCCCCCCC--------
Q 022960 33 EKLVGILHET---GSKQLVIVCHGFQSTKDRI-------PMVNLA---AALEREGISAFRFDFSGNGESEGS-------- 91 (289)
Q Consensus 33 ~~l~~~~~~~---~~~~~iv~~hG~~~~~~~~-------~~~~~~---~~l~~~G~~v~~~d~~G~G~s~~~-------- 91 (289)
.+|.|..++. ...++||++|++.+++... +|..++ +.|....|.||++|..|.|.++..
T Consensus 24 ~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~t 103 (357)
T d2b61a1 24 INVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQT 103 (357)
T ss_dssp EEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTT
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCC
Confidence 4566666653 2458999999999886531 344432 233333599999999997654311
Q ss_pred -------ccccchHHHHHHHHHHHHHHHhcCCceE-EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc---
Q 022960 92 -------FLYGNYRREAEDLRAIVQDFCAKGRVIT-AIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG--- 159 (289)
Q Consensus 92 -------~~~~~~~~~~~d~~~~i~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~--- 159 (289)
+...++.+.++-...++++| +++++ .++|.||||+.|+.+|..+|+ |+++|.+++..........
T Consensus 104 g~~~g~~FP~iti~D~v~aq~~Ll~~L---GI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~ 180 (357)
T d2b61a1 104 GKPYGSQFPNIVVQDIVKVQKALLEHL---GISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNH 180 (357)
T ss_dssp SSBCGGGCCCCCHHHHHHHHHHHHHHT---TCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHH
T ss_pred CCCCCcccccchhHHHHHHHHHHHHHh---CcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHH
Confidence 11234455555556666666 99998 788999999999999999999 9999999875432211000
Q ss_pred ----cc-------------------cchhHhhhh----------hcCccccccccccc---cc---------------cc
Q 022960 160 ----RL-------------------GLGYLQRIK----------QNGFIDVRNKKGKL---EY---------------RV 188 (289)
Q Consensus 160 ----~~-------------------~~~~~~~~~----------~~~~~~~~~~~~~~---~~---------------~~ 188 (289)
.+ +....+.+. ...+.......... .+ ++
T Consensus 181 ~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rf 260 (357)
T d2b61a1 181 VMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERF 260 (357)
T ss_dssp HHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhC
Confidence 00 000000000 00000000000000 00 01
Q ss_pred Chhhhhhhhcc----chh-----hhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC----CcEEEEEcC-CCcc-cc
Q 022960 189 TQESLMDRLST----DIH-----AACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP----NHKLHIIEG-ADHE-FT 253 (289)
Q Consensus 189 ~~~~~~~~~~~----~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~-~gH~-~~ 253 (289)
+...+...... +.. ......+|++|+|+|..+.|.++|++..+.+++.++ +++++.++. .||. +.
T Consensus 261 Dan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL 340 (357)
T d2b61a1 261 DANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFL 340 (357)
T ss_dssp CHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHH
T ss_pred CHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccC
Confidence 11111100000 000 001122579999999999999999999888888775 458888886 4898 55
Q ss_pred cCchHHHHHHHHHHHh
Q 022960 254 SHQDELASLVIQFIKA 269 (289)
Q Consensus 254 ~~~~~~~~~i~~fl~~ 269 (289)
.+.+++.+.|.+||+.
T Consensus 341 ~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 341 VDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHcc
Confidence 6788999999999974
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.81 E-value=3.8e-19 Score=138.73 Aligned_cols=233 Identities=12% Similarity=0.172 Sum_probs=138.2
Q ss_pred ceEEEEEeec---CCCcEEEEEcCCCCCCCC-----------cchHHHH---HHHHHcCccEEEEccccCCCCCCCc---
Q 022960 33 EKLVGILHET---GSKQLVIVCHGFQSTKDR-----------IPMVNLA---AALEREGISAFRFDFSGNGESEGSF--- 92 (289)
Q Consensus 33 ~~l~~~~~~~---~~~~~iv~~hG~~~~~~~-----------~~~~~~~---~~l~~~G~~v~~~d~~G~G~s~~~~--- 92 (289)
.+|.|..++. ...++||++|++.+++.. .+|..++ +.|...-|.||++|..|.|.++.++
T Consensus 27 ~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s~ 106 (362)
T d2pl5a1 27 VVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSI 106 (362)
T ss_dssp EEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSB
T ss_pred ceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCcccc
Confidence 4566666653 245799999999987521 1243322 1233334999999999987664321
Q ss_pred ------------cccchHHHHHHHHHHHHHHHhcCCceE-EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccccccc
Q 022960 93 ------------LYGNYRREAEDLRAIVQDFCAKGRVIT-AIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIE 158 (289)
Q Consensus 93 ------------~~~~~~~~~~d~~~~i~~l~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~ 158 (289)
...++.+.+.....++++| +++++ .|+|.||||+.|+.+|..+|+ |+.+|.+++.........
T Consensus 107 ~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~L---GI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~~ 183 (362)
T d2pl5a1 107 HPETSTPYGSRFPFVSIQDMVKAQKLLVESL---GIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQI 183 (362)
T ss_dssp CTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT---TCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHH
T ss_pred ccccccccCcCCccchhHHHHHHHHHHHHHh---CcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHHH
Confidence 1223444555555555555 89888 588999999999999999999 999999987553321000
Q ss_pred c-------cc------------------cchhHhhhh----------hcCcccccccc-----------------ccccc
Q 022960 159 G-------RL------------------GLGYLQRIK----------QNGFIDVRNKK-----------------GKLEY 186 (289)
Q Consensus 159 ~-------~~------------------~~~~~~~~~----------~~~~~~~~~~~-----------------~~~~~ 186 (289)
. .+ +-...+.+. ...+....... .....
T Consensus 184 ~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~~ 263 (362)
T d2pl5a1 184 AFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVD 263 (362)
T ss_dssp HHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSS
T ss_pred HHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHHh
Confidence 0 00 000000000 00000000000 00000
Q ss_pred ccChhhhhhhhc----cch----hhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC----cEEEEEcC-CCcc-c
Q 022960 187 RVTQESLMDRLS----TDI----HAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN----HKLHIIEG-ADHE-F 252 (289)
Q Consensus 187 ~~~~~~~~~~~~----~~~----~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~-~gH~-~ 252 (289)
+++...+..... .+. .......+|++|+|+|..+.|.++|++..+++++.+++ ++++.++. .||. +
T Consensus 264 rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHdaF 343 (362)
T d2pl5a1 264 RFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSF 343 (362)
T ss_dssp CCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGGG
T ss_pred cCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchh
Confidence 111111111100 000 00111235799999999999999999999999998864 46777764 7898 5
Q ss_pred ccCchHHHHHHHHHHH
Q 022960 253 TSHQDELASLVIQFIK 268 (289)
Q Consensus 253 ~~~~~~~~~~i~~fl~ 268 (289)
..+.+++.+.|.+||+
T Consensus 344 L~e~~~~~~~I~~FL~ 359 (362)
T d2pl5a1 344 LLKNPKQIEILKGFLE 359 (362)
T ss_dssp GSCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHc
Confidence 6788999999999996
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.80 E-value=9.1e-18 Score=134.89 Aligned_cols=207 Identities=15% Similarity=0.171 Sum_probs=130.0
Q ss_pred HHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcC-----------------CceEEEEEeChh
Q 022960 65 NLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKG-----------------RVITAIIGHSKG 127 (289)
Q Consensus 65 ~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~-----------------~~~~~l~G~S~G 127 (289)
...+.|+++||.|+.+|.||.|.|.+.....+ ....+|..++|+++..+. ..+|.++|+|+|
T Consensus 127 ~~~~~~~~~GYavv~~D~RG~g~S~G~~~~~~-~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~ 205 (405)
T d1lnsa3 127 SLNDYFLTRGFASIYVAGVGTRSSDGFQTSGD-YQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYL 205 (405)
T ss_dssp HHHHHHHTTTCEEEEECCTTSTTSCSCCCTTS-HHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHH
T ss_pred cchHHHHhCCCEEEEECCCCCCCCCCccccCC-hhhhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHH
Confidence 45678999999999999999999999876554 345789999999996531 237999999999
Q ss_pred HHHHHHHHHhCCC-ccEEEEeccCCcccccccccccc-----------hhHhhhhhcCccccccc-ccccccc-------
Q 022960 128 GNAVLLYASKYND-ISIVINISGRFNLKRGIEGRLGL-----------GYLQRIKQNGFIDVRNK-KGKLEYR------- 187 (289)
Q Consensus 128 g~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~~~~~------- 187 (289)
|..++.+|...|. ++++|..++..+........-.. ................. .......
T Consensus 206 G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (405)
T d1lnsa3 206 GTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMT 285 (405)
T ss_dssp HHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccccchhhhchhhhhhccchhh
Confidence 9999999998877 99999998877654222110000 00000000000000000 0000000
Q ss_pred ----cChhhhhhhh-ccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC---cEEEEEcCCCccccc--Cch
Q 022960 188 ----VTQESLMDRL-STDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN---HKLHIIEGADHEFTS--HQD 257 (289)
Q Consensus 188 ----~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~--~~~ 257 (289)
.........+ ..+.... ..+|++|+|+++|..|..+++..+..+++.++. .++++-+ .+|.... ...
T Consensus 286 ~~~~~~~~~~d~~w~~~s~~~~--~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~~~~~Lilgp-w~H~~~~~~~~~ 362 (405)
T d1lnsa3 286 AALDRKSGDYNQFWHDRNYLIN--TDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHR-GAHIYMNSWQSI 362 (405)
T ss_dssp HHHCTTTCCCCHHHHTTBGGGG--GGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEES-CSSCCCTTBSSC
T ss_pred hhhhhccccchhhhhhcChhhh--hhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEeC-CCCCCCcccccc
Confidence 0000000000 0111111 225699999999999999998888888877642 4666666 5897532 235
Q ss_pred HHHHHHHHHHHhhcCCCC
Q 022960 258 ELASLVIQFIKANYQKDG 275 (289)
Q Consensus 258 ~~~~~i~~fl~~~~~~~~ 275 (289)
++.+.+.+|++.+++...
T Consensus 363 d~~~~~~~wFD~~LkG~~ 380 (405)
T d1lnsa3 363 DFSETINAYFVAKLLDRD 380 (405)
T ss_dssp CHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHhCCCC
Confidence 678889999999997653
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.80 E-value=2.6e-19 Score=139.19 Aligned_cols=221 Identities=13% Similarity=0.099 Sum_probs=131.8
Q ss_pred ceeeEEeeCCCCceEEEEEeecC-CCcEEEEEcCCCCCCCC-cchHHHHHHHHH-cCccEEEEccccCCCCCCCccccch
Q 022960 21 QRRRVVIPNSHGEKLVGILHETG-SKQLVIVCHGFQSTKDR-IPMVNLAAALER-EGISAFRFDFSGNGESEGSFLYGNY 97 (289)
Q Consensus 21 ~~~~~~~~~~~g~~l~~~~~~~~-~~~~iv~~hG~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~~~~~~ 97 (289)
..++..++..+| .+..+++.|. +.|+||++||+|....+ ..+..++..+++ .|+.|+.+|+|...+ ..+
T Consensus 55 ~~~~~~i~~~~g-~i~~~iy~P~~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~-------~~~ 126 (311)
T d1jjia_ 55 RVEDRTIKGRNG-DIRVRVYQQKPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPE-------HKF 126 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEEESSSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTT-------SCT
T ss_pred eEEEEEEeCCCC-cEEEEEEcCCCCceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccc-------ccc
Confidence 455677887777 5777666554 67899999998643221 225566666655 599999999995422 234
Q ss_pred HHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhC-----CCccEEEEeccCCccccccccccc----
Q 022960 98 RREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKY-----NDISIVINISGRFNLKRGIEGRLG---- 162 (289)
Q Consensus 98 ~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~-----p~v~~~v~~~~~~~~~~~~~~~~~---- 162 (289)
....+|+..+++++.++ +.++++++|+|.||.+++.++... +...+.+++.|..+..........
T Consensus 127 p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~ 206 (311)
T d1jjia_ 127 PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFGEG 206 (311)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTSSS
T ss_pred chhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCcccccccccc
Confidence 55677888888887665 346899999999999988776543 226888888887765422111000
Q ss_pred -----chhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC
Q 022960 163 -----LGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI 237 (289)
Q Consensus 163 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 237 (289)
............. .......... ... ........|+++++|+.|.+++ .+..+++.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~-sp~--~~~~~~~pP~li~~g~~D~l~d--~~~~~~~~L 268 (311)
T d1jjia_ 207 LWILDQKIMSWFSEQYFS-------------REEDKFNPLA-SVI--FADLENLPPALIITAEYDPLRD--EGEVFGQML 268 (311)
T ss_dssp CSSCCHHHHHHHHHHHCS-------------SGGGGGCTTT-SGG--GSCCTTCCCEEEEEEEECTTHH--HHHHHHHHH
T ss_pred cccccHHHhhhhhhhccc-------------cccccccccc-chh--hcccccCCCEEEEEcCCCCChH--HHHHHHHHH
Confidence 0000000000000 0000000000 000 0011224699999999997764 344444443
Q ss_pred ----CCcEEEEEcCCCcccc-cC-----chHHHHHHHHHH
Q 022960 238 ----PNHKLHIIEGADHEFT-SH-----QDELASLVIQFI 267 (289)
Q Consensus 238 ----~~~~~~~~~~~gH~~~-~~-----~~~~~~~i~~fl 267 (289)
..++++.++|.+|.+. .. ..+..+.|.+||
T Consensus 269 ~~~Gv~v~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 269 RRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp HHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 4579999999999754 11 245777788887
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.80 E-value=2.6e-20 Score=122.08 Aligned_cols=96 Identities=18% Similarity=0.114 Sum_probs=77.6
Q ss_pred CCCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHH
Q 022960 29 NSHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIV 108 (289)
Q Consensus 29 ~~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i 108 (289)
..+|.+++ |...|++|+||++||.... | .+.|. .+|+|+++|+||||.|+.+ ..+.++.++++.+++
T Consensus 7 ~~~G~~l~--y~~~G~G~pvlllHG~~~~-----w---~~~L~-~~yrvi~~DlpG~G~S~~p--~~s~~~~a~~i~~ll 73 (122)
T d2dsta1 7 HLYGLNLV--FDRVGKGPPVLLVAEEASR-----W---PEALP-EGYAFYLLDLPGYGRTEGP--RMAPEELAHFVAGFA 73 (122)
T ss_dssp EETTEEEE--EEEECCSSEEEEESSSGGG-----C---CSCCC-TTSEEEEECCTTSTTCCCC--CCCHHHHHHHHHHHH
T ss_pred EECCEEEE--EEEEcCCCcEEEEeccccc-----c---ccccc-CCeEEEEEeccccCCCCCc--ccccchhHHHHHHHH
Confidence 34688888 4556678999999985432 2 23344 4799999999999999864 357788999999999
Q ss_pred HHHHhcCCceEEEEEeChhHHHHHHHHHhCCC
Q 022960 109 QDFCAKGRVITAIIGHSKGGNAVLLYASKYND 140 (289)
Q Consensus 109 ~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 140 (289)
+.+ ++++.+++||||||.+++.+++..+.
T Consensus 74 ~~L---~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 74 VMM---NLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHT---TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHh---CCCCcEEEEeCccHHHHHHHHhhccc
Confidence 998 88899999999999999999987654
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.80 E-value=3.3e-19 Score=136.56 Aligned_cols=201 Identities=10% Similarity=0.022 Sum_probs=129.3
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc-CCceEEEE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK-GRVITAII 122 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~l~ 122 (289)
.+++|||+||++.+....+|..+.+.|.+.||.|+.+|++|+|.++ ....++++.+.++++.+. +.+++.||
T Consensus 30 ~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d-------~~~sae~la~~i~~v~~~~g~~kV~lV 102 (317)
T d1tcaa_ 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND-------TQVNTEYMVNAITALYAGSGNNKLPVL 102 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSC-------HHHHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCc-------hHhHHHHHHHHHHHHHHhccCCceEEE
Confidence 5567999999998765445678999999999999999999998764 244466777777777655 67899999
Q ss_pred EeChhHHHHHHHHHhCCC----ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhc
Q 022960 123 GHSKGGNAVLLYASKYND----ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLS 198 (289)
Q Consensus 123 G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (289)
||||||.++..++..+|+ |+.+|.++++..-..... ......... ...........+.+.+.
T Consensus 103 GhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt~~a~------~~~~~~~~~--------pa~~q~~~~s~fl~~L~ 168 (317)
T d1tcaa_ 103 TWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAG------PLDALAVSA--------PSVWQQTTGSALTTALR 168 (317)
T ss_dssp EETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGH------HHHHTTCBC--------HHHHHTBTTCHHHHHHH
T ss_pred EeCchHHHHHHHHHHCCCcchheeEEEEeCCCCCCccccc------chhhhhccC--------chhhhhcCCcHHHHHHH
Confidence 999999999999998873 899999998764321110 000000000 00000000011111111
Q ss_pred cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhh--CCCcEEEEEc-------CCCcccccCchHHHHHHHHHHHh
Q 022960 199 TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKF--IPNHKLHIIE-------GADHEFTSHQDELASLVIQFIKA 269 (289)
Q Consensus 199 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~-------~~gH~~~~~~~~~~~~i~~fl~~ 269 (289)
.. ....-.+|++.|++..|.+|.+..+..+.+. .++++-+.+. -.+|.-+.........+.+-|.+
T Consensus 169 ~~-----~~~~~~V~~t~I~s~~D~iV~P~~~~~~~~~~~~~~~~Ni~vq~~c~~~~~~~H~~l~~~p~~~~~v~daL~~ 243 (317)
T d1tcaa_ 169 NA-----GGLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNGKNVQAQAVCGPLFVIDHAGSLTSQFSYVVGRSALRS 243 (317)
T ss_dssp HT-----TTTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBTSEEEEHHHHHCTTCCCCTTHHHHBHHHHHHHHHHHHC
T ss_pred hC-----CCCCCCCCEEEEecCCCcccCccccchhccccCCCCceeEEeecccCCCCcCCccccccCHHHHHHHHHHHhc
Confidence 11 0111257999999999999988766554432 3456655552 25787554456777777777765
Q ss_pred h
Q 022960 270 N 270 (289)
Q Consensus 270 ~ 270 (289)
.
T Consensus 244 ~ 244 (317)
T d1tcaa_ 244 T 244 (317)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.78 E-value=3.6e-18 Score=128.72 Aligned_cols=206 Identities=17% Similarity=0.123 Sum_probs=126.1
Q ss_pred cCCCcEEEEEcCC--CCCCCCcchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceE
Q 022960 42 TGSKQLVIVCHGF--QSTKDRIPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVIT 119 (289)
Q Consensus 42 ~~~~~~iv~~hG~--~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 119 (289)
.+.+|+++|+||. +++. ..|..+++.|... +.|+.+|+||+|.+... ..+++++++++.+.|... .+..++
T Consensus 39 g~~~~~l~c~~~~~~gg~~--~~y~~La~~L~~~-~~V~al~~pG~~~~e~~--~~s~~~~a~~~~~~i~~~--~~~~P~ 111 (255)
T d1mo2a_ 39 GPGEVTVICCAGTAAISGP--HEFTRLAGALRGI-APVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRT--QGDKPF 111 (255)
T ss_dssp CSCSSEEEEECCCSSSCSG--GGGHHHHHHHTTT-CCEEEECCTTSSTTCCE--ESSHHHHHHHHHHHHHHT--TSSSCE
T ss_pred CCCCCeEEEECCCCCCCCH--HHHHHHHHhcCCC-ceEEEEeCCCcCCCCCC--CCCHHHHHHHHHHHHHHh--CCCCCE
Confidence 3467899999985 3444 4589999999875 89999999999987533 346677777776655432 245689
Q ss_pred EEEEeChhHHHHHHHHHhC---CC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhh
Q 022960 120 AIIGHSKGGNAVLLYASKY---ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMD 195 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (289)
+|+||||||.+|+.+|.+. .. +.+++++++........... +...+........ ........+..
T Consensus 112 ~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~----~~~~~~~~~~~~~-------~~~~~~~~l~a 180 (255)
T d1mo2a_ 112 VVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNA----WLEELTATLFDRE-------TVRMDDTRLTA 180 (255)
T ss_dssp EEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHH----HHHHHHTTCC-----------CCCCHHHHHH
T ss_pred EEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhh----HHHHHHHHhhccc-------cccCCHHHHHH
Confidence 9999999999999999765 33 89999998754432221111 1111111111000 00011111100
Q ss_pred hhc-cchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC-CcEEEEEcCCCcc-ccc-CchHHHHHHHHHHH
Q 022960 196 RLS-TDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP-NHKLHIIEGADHE-FTS-HQDELASLVIQFIK 268 (289)
Q Consensus 196 ~~~-~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~-~~~-~~~~~~~~i~~fl~ 268 (289)
... ...........+.+|++++.+++|...... ..+....+ ..+++.++| +|+ ++. .++.+++.|.+||.
T Consensus 181 ~~~~~~~~~~~~~~~~~~p~l~v~a~~~~~~~~~--~~w~~~~~~~~~~~~v~G-~H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 181 LGAYDRLTGQWRPRETGLPTLLVSAGEPMGPWPD--DSWKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp HHHHHHHHHHCCCCCCCCCEEEEECCSSSSCCTT--CCCCCCCCSSCEEEECCS-CCSSCSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCccccceEEEeecCCCCCcchh--hHHHHhCCCCcEEEEECC-CCcccccccHHHHHHHHHHHhC
Confidence 000 001111222356899999999887544322 23344443 478999996 887 443 45778999999984
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.77 E-value=1.1e-17 Score=129.98 Aligned_cols=234 Identities=12% Similarity=0.060 Sum_probs=133.2
Q ss_pred cceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCC---CCCCcchHHHHHHHHHcC-ccEEEEccccCCCCCCC
Q 022960 20 VQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQS---TKDRIPMVNLAAALEREG-ISAFRFDFSGNGESEGS 91 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~---~~~~~~~~~~~~~l~~~G-~~v~~~d~~G~G~s~~~ 91 (289)
...+++.+.. +|.++...++.|. +.|+||++||++. +.. .+..+...++.+| +.|+.+|+|....
T Consensus 44 ~~~~~~~~~~-~g~~i~~~~y~P~~~~~~~Pvvv~iHGGg~~~g~~~--~~~~~~~~~a~~~~~~v~~v~Yrl~p~---- 116 (308)
T d1u4na_ 44 AEVREFDMDL-PGRTLKVRMYRPEGVEPPYPALVYYHGGGWVVGDLE--THDPVCRVLAKDGRAVVFSVDYRLAPE---- 116 (308)
T ss_dssp SEEEEEEEEE-TTEEEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT--TTHHHHHHHHHHHTSEEEEECCCCTTT----
T ss_pred CcEEEEEEec-CCceEEEEEEeccccCCCCCEEEEEecCeeeeeccc--cccchhhhhhhcccccccccccccccc----
Confidence 3455666664 6777887776553 4579999999863 333 3667777777774 5688899984432
Q ss_pred ccccchHHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhCC-----CccEEEEeccCCccccccccc
Q 022960 92 FLYGNYRREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKYN-----DISIVINISGRFNLKRGIEGR 160 (289)
Q Consensus 92 ~~~~~~~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~~~~~~~~~~ 160 (289)
..+....+|+..+++++.++ +.+++++.|+|.||.+++.++.... .+.+..++.+...........
T Consensus 117 ---~~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (308)
T d1u4na_ 117 ---HKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPA 193 (308)
T ss_dssp ---SCTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCH
T ss_pred ---cccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccccccc
Confidence 23455678888889888765 3568999999999999988776542 256666666654432211110
Q ss_pred ccchhHhhhhhcCcccccc-cccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC--
Q 022960 161 LGLGYLQRIKQNGFIDVRN-KKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI-- 237 (289)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-- 237 (289)
.. ............. ......+............... ......-..|+++++|+.|.+++ .++.+++.+
T Consensus 194 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~d~~~~Pp~li~~g~~D~l~~--~~~~~~~~L~~ 265 (308)
T d1u4na_ 194 SI----EENAEGYLLTGGMSLWFLDQYLNSLEELTHPWFSPV--LYPDLSGLPPAYIATAQYDPLRD--VGKLYAEALNK 265 (308)
T ss_dssp HH----HHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGG--GCSCCTTCCCEEEEEEEECTTHH--HHHHHHHHHHH
T ss_pred hh----hhccccccccchhhhhhhhcccCccccccchhhhhh--hchhhcCCCCeeEEecCcCCchH--HHHHHHHHHHH
Confidence 00 0000000000000 0000000000000000000000 00001113589999999997763 445555444
Q ss_pred --CCcEEEEEcCCCccccc----C--chHHHHHHHHHHHhhc
Q 022960 238 --PNHKLHIIEGADHEFTS----H--QDELASLVIQFIKANY 271 (289)
Q Consensus 238 --~~~~~~~~~~~gH~~~~----~--~~~~~~~i~~fl~~~~ 271 (289)
..+++++++|.+|.+.. . ..+..+.+.+||++.+
T Consensus 266 ~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 266 AGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp TTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 35799999999998542 1 2468888999998765
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.76 E-value=4.9e-17 Score=129.90 Aligned_cols=135 Identities=14% Similarity=0.141 Sum_probs=103.2
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC---CCcEEEEEcCCCCCC------CC----cchHHHHHHHHHcCccEEEEccccC
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG---SKQLVIVCHGFQSTK------DR----IPMVNLAAALEREGISAFRFDFSGN 85 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~iv~~hG~~~~~------~~----~~~~~~~~~l~~~G~~v~~~d~~G~ 85 (289)
....+++.++..||++|.+.++.|. +.|+||+.|+++... .. .......+.|+++||.|+.+|.||+
T Consensus 25 ~~~~~~v~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~ 104 (385)
T d2b9va2 25 DYIKREVMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGK 104 (385)
T ss_dssp SEEEEEEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTS
T ss_pred CCeEeEEEEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcc
Confidence 3567789999999999999877653 557888888775210 00 0122355789999999999999999
Q ss_pred CCCCCCccccch---------HHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 86 GESEGSFLYGNY---------RREAEDLRAIVQDFCAKG---RVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 86 G~s~~~~~~~~~---------~~~~~d~~~~i~~l~~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
|.|.+....... ...++|..++++++.++. ..+|.++|+|+||.+++.+|...|. +++++..++..+
T Consensus 105 g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 105 YGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp TTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred cCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 999876532211 235799999999997762 3589999999999999999988877 999998887655
Q ss_pred c
Q 022960 153 L 153 (289)
Q Consensus 153 ~ 153 (289)
.
T Consensus 185 ~ 185 (385)
T d2b9va2 185 G 185 (385)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.75 E-value=4.7e-18 Score=132.22 Aligned_cols=103 Identities=19% Similarity=0.278 Sum_probs=85.1
Q ss_pred CCcEEEEEcCCCCCCCCc----chHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceE
Q 022960 44 SKQLVIVCHGFQSTKDRI----PMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVIT 119 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~----~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 119 (289)
++.+|||+||++++...+ +|..+.+.|.++||.|+++|+||+|.|..... ..++..+++.++++.+ +.+++
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~--~~~~l~~~i~~~~~~~---~~~~v 81 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNG--RGEQLLAYVKQVLAAT---GATKV 81 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTS--HHHHHHHHHHHHHHHH---CCSCE
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--cHHHHHHHHHHHHHHh---CCCCE
Confidence 455689999998876421 47889999999999999999999998875432 3455666777777666 78899
Q ss_pred EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 120 AIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
++|||||||.++..++..+|+ |+++|+++++.
T Consensus 82 ~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 82 NLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp EEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEEeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 999999999999999999999 99999998864
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.73 E-value=1.8e-15 Score=114.03 Aligned_cols=203 Identities=16% Similarity=0.134 Sum_probs=118.2
Q ss_pred ccceeeEEeeC-CCCceEEEEEeecC------CCcEEEEEcCCCCCCCCc-----chHHHHHHHHHcC-ccEEEEccccC
Q 022960 19 VVQRRRVVIPN-SHGEKLVGILHETG------SKQLVIVCHGFQSTKDRI-----PMVNLAAALEREG-ISAFRFDFSGN 85 (289)
Q Consensus 19 ~~~~~~~~~~~-~~g~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~-----~~~~~~~~l~~~G-~~v~~~d~~G~ 85 (289)
.-..+++++.+ .+|.++.+.++.|. +-|+|+++||.+++...+ ........+...+ ...+.+...+.
T Consensus 19 ~g~~~~~~~~S~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (255)
T d1jjfa_ 19 RGQVVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNT 98 (255)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECC
T ss_pred ceEEEEEEEEecCCCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeeccc
Confidence 34556666664 46788888877543 347999999998776442 1222333444332 33333333332
Q ss_pred CCCCCCccccchHHHHHHHHHHHHHHHhc-----CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccc
Q 022960 86 GESEGSFLYGNYRREAEDLRAIVQDFCAK-----GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEG 159 (289)
Q Consensus 86 G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~ 159 (289)
..................+.+++..+.+. +.++++++|+|+||..++.++.++|+ +++++.+++..........
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~~~ 178 (255)
T d1jjfa_ 99 NAAGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNERL 178 (255)
T ss_dssp CCCCTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHHHH
T ss_pred ccccccccccccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCcccccc
Confidence 22222221111122223344444444432 45679999999999999999999999 9999999886543211000
Q ss_pred cccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhC--
Q 022960 160 RLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFI-- 237 (289)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-- 237 (289)
. ........ ....|+++.+|++|..++. .+.+++.+
T Consensus 179 ~--------------------------------------~~~~~~~~--~~~~~~~i~~G~~D~~~~~--~~~~~~~L~~ 216 (255)
T d1jjfa_ 179 F--------------------------------------PDGGKAAR--EKLKLLFIACGTNDSLIGF--GQRVHEYCVA 216 (255)
T ss_dssp C--------------------------------------TTTTHHHH--HHCSEEEEEEETTCTTHHH--HHHHHHHHHH
T ss_pred c--------------------------------------ccHHHHhh--ccCCcceEEeCCCCCCchH--HHHHHHHHHH
Confidence 0 00000000 1257999999999998764 33444443
Q ss_pred --CCcEEEEEcCCCcccccCchHHHHHHHHHH
Q 022960 238 --PNHKLHIIEGADHEFTSHQDELASLVIQFI 267 (289)
Q Consensus 238 --~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl 267 (289)
-+.++..++++||.+. -+.+.+.+||
T Consensus 217 ~g~~~~~~~~~~ggH~~~----~W~~~l~~fl 244 (255)
T d1jjfa_ 217 NNINHVYWLIQGGGHDFN----VWKPGLWNFL 244 (255)
T ss_dssp TTCCCEEEEETTCCSSHH----HHHHHHHHHH
T ss_pred CCCCEEEEEECCCCcCHH----HHHHHHHHHH
Confidence 3578999999999752 2334555565
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.68 E-value=5.7e-17 Score=123.46 Aligned_cols=100 Identities=22% Similarity=0.303 Sum_probs=80.1
Q ss_pred CCcEEEEEcCCCCCCCC---cchHHHHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhcCCceEE
Q 022960 44 SKQLVIVCHGFQSTKDR---IPMVNLAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAKGRVITA 120 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~ 120 (289)
.+-+|||+||+++.... .+|..+.+.|.++||+|+++|++|+|.+. ....++.+++.++++.+ +.++++
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~-----~~a~~l~~~i~~~~~~~---g~~~v~ 77 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALS---GQPKVN 77 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHH---CCSCEE
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH-----HHHHHHHHHHHHHHHHc---CCCeEE
Confidence 44569999999887543 24788999999999999999999988542 12244455565555555 788999
Q ss_pred EEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 121 IIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
+|||||||.++..++..+|+ |+++|.++++.
T Consensus 78 ligHS~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 78 LIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp EEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEEECccHHHHHHHHHHCCccceeEEEECCCC
Confidence 99999999999999999999 99999998764
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.68 E-value=9e-15 Score=112.15 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=90.6
Q ss_pred ccceeeEEeeC-CCCceEEEEEeec-CCCcEEEEEcCCCCCCCCcchHH---HHHHHHHcCccEEEEccccCCCCCCCcc
Q 022960 19 VVQRRRVVIPN-SHGEKLVGILHET-GSKQLVIVCHGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGESEGSFL 93 (289)
Q Consensus 19 ~~~~~~~~~~~-~~g~~l~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~---~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 93 (289)
+++.+.+++.+ ..|.++.+++..+ ++.|+|+++||.++..+...|.. +.+.+.+.|+.++.++..+.+.......
T Consensus 6 ~~~v~~~~~~s~~~~r~~~~~v~~p~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 85 (288)
T d1sfra_ 6 GLPVEYLQVPSPSMGRDIKVQFQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQ 85 (288)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSS
T ss_pred CCEEEEEEEECCCCCcEEEEEEeCCCCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccC
Confidence 34445566654 3567777766644 47899999999887543322322 4566677799999999876554332111
Q ss_pred -------ccchHHHHHHHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 94 -------YGNYRREAEDLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 94 -------~~~~~~~~~d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
..........+.+++.++.++ +.+++.+.|+|+||+.|+.++.++|+ +++++.++|.++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~~ 157 (288)
T d1sfra_ 86 PACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPS 157 (288)
T ss_dssp CEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTT
T ss_pred cccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccccc
Confidence 001111122344445555444 66789999999999999999999999 99999999977644
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.60 E-value=2.2e-14 Score=107.30 Aligned_cols=213 Identities=12% Similarity=0.125 Sum_probs=119.5
Q ss_pred CcccceeeEEeeCC-CCceEEEEEeecC-----CCcEEEEEcCCCCCCCCcchHHHHHHHHHcCcc-EEEEccccCCCCC
Q 022960 17 DPVVQRRRVVIPNS-HGEKLVGILHETG-----SKQLVIVCHGFQSTKDRIPMVNLAAALEREGIS-AFRFDFSGNGESE 89 (289)
Q Consensus 17 ~~~~~~~~~~~~~~-~g~~l~~~~~~~~-----~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~~G~G~s~ 89 (289)
.+..+.+++.+.+. .|.+..++++.|. +.|+||++||.+...... .....+.+...|.. ++++.....+...
T Consensus 10 ~~~~~~~~~~~~S~~lg~~~~~~v~~P~~~~~~~~Pvvv~lhG~~~~~~~~-~~~~l~~l~~~~~~~~~i~v~~~~~~~~ 88 (246)
T d3c8da2 10 APEIPAKEIIWKSERLKNSRRVWIFTTGDVTAEERPLAVLLDGEFWAQSMP-VWPVLTSLTHRQQLPPAVYVLIDAIDTT 88 (246)
T ss_dssp CCSSCCEEEEEEETTTTEEEEEEEEEC-----CCCCEEEESSHHHHHHTSC-CHHHHHHHHHTTSSCSCEEEEECCCSHH
T ss_pred CCCCCcEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEeCCcchhccCc-HHHHHHHHHHhCCCCceEEeeccccccc
Confidence 33445566677664 3667777766443 458999999965322212 33445666666532 2222222111111
Q ss_pred C----Cccccch-HHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccccccccc
Q 022960 90 G----SFLYGNY-RREAEDLRAIVQDFCAK--GRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKRGIEGRL 161 (289)
Q Consensus 90 ~----~~~~~~~-~~~~~d~~~~i~~l~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~ 161 (289)
. ......+ ....+++..+++..... +.+++.++|+|+||..++.++.++|+ +++++.++|.+..........
T Consensus 89 ~~~~~~~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~~~~~ 168 (246)
T d3c8da2 89 HRAHELPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQE 168 (246)
T ss_dssp HHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTSSSC
T ss_pred ccccccCccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCCccch
Confidence 0 0011111 12234444445443222 34679999999999999999999999 999999999765432110000
Q ss_pred cchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCC---
Q 022960 162 GLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIP--- 238 (289)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 238 (289)
...... ...........|+++.+|+.|..+ ...++.+++.+.
T Consensus 169 -----------------------------~~~~~~-----~~~~~~~~~~~~~~l~~G~~D~~~-~~~~~~l~~~L~~~g 213 (246)
T d3c8da2 169 -----------------------------GVLLEK-----LKAGEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIK 213 (246)
T ss_dssp -----------------------------CHHHHH-----HHTTSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGT
T ss_pred -----------------------------HHHHHH-----hhhhhhhccCCCeEEEecCCCcch-hHHHHHHHHHHHHCC
Confidence 000000 000111123789999999999876 466777887774
Q ss_pred -CcEEEEEcCCCcccccCchHHHHHHHHHHHhh
Q 022960 239 -NHKLHIIEGADHEFTSHQDELASLVIQFIKAN 270 (289)
Q Consensus 239 -~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 270 (289)
..++.+++| ||.+ .-+.+.|.++|...
T Consensus 214 ~~~~~~~~~G-gH~~----~~W~~~l~~~l~~l 241 (246)
T d3c8da2 214 ESIFWRQVDG-GHDA----LCWRGGLMQGLIDL 241 (246)
T ss_dssp TSEEEEEESC-CSCH----HHHHHHHHHHHHHH
T ss_pred CCEEEEEeCC-CCCh----HHHHHHHHHHHHHH
Confidence 368888887 8974 23344455555443
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.58 E-value=1.2e-13 Score=105.15 Aligned_cols=134 Identities=16% Similarity=0.167 Sum_probs=87.1
Q ss_pred cceeeEEeeC-CCCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHH---HHHHHHHcCccEEEEccccCCCCC------
Q 022960 20 VQRRRVVIPN-SHGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGESE------ 89 (289)
Q Consensus 20 ~~~~~~~~~~-~~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~---~~~~l~~~G~~v~~~d~~G~G~s~------ 89 (289)
.+.+.+++++ ..|..+...+ ..++.|+|+++||.++..+...|.. +.+.+.+.|+.|+.+|-...+...
T Consensus 4 ~~v~~~~~~s~~~~r~i~~~~-~~~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~ 82 (280)
T d1dqza_ 4 LPVEYLQVPSASMGRDIKVQF-QGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPS 82 (280)
T ss_dssp SCEEEEEEEETTTTEEEEEEE-ECCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSC
T ss_pred cEEEEEEEecccCCCcceEEe-eCCCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCc
Confidence 4445555544 3466676655 4567899999999876432222432 556677789999999853221111
Q ss_pred ---CCccccchHH-HHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCccc
Q 022960 90 ---GSFLYGNYRR-EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLK 154 (289)
Q Consensus 90 ---~~~~~~~~~~-~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 154 (289)
.......+.+ .++++...|+.-...+.+++++.|+||||+.|+.+|.++|+ +++++.++|.+...
T Consensus 83 ~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~~ 152 (280)
T d1dqza_ 83 QSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPS 152 (280)
T ss_dssp TTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTT
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCcc
Confidence 0111123333 34555555554333366789999999999999999999999 99999999977643
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.58 E-value=1.6e-13 Score=103.79 Aligned_cols=132 Identities=15% Similarity=0.153 Sum_probs=84.8
Q ss_pred eeEEeeCC-CCceEEEEEeecCCCcEEEEEcCCCCCCCCcchHH---HHHHHHHcCccEEEEccccCCC-CC-CCccccc
Q 022960 23 RRVVIPNS-HGEKLVGILHETGSKQLVIVCHGFQSTKDRIPMVN---LAAALEREGISAFRFDFSGNGE-SE-GSFLYGN 96 (289)
Q Consensus 23 ~~~~~~~~-~g~~l~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~---~~~~l~~~G~~v~~~d~~G~G~-s~-~~~~~~~ 96 (289)
+.+++++. .|..+...+.. +..|+|+++||.++..+...|.. +.+.+.+.++.|+.+|--..+. +. .......
T Consensus 5 e~~~v~s~~~~r~~~~~v~~-~~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~~~~ 83 (267)
T d1r88a_ 5 ENLMVPSPSMGRDIPVAFLA-GGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQ 83 (267)
T ss_dssp EEEEEEETTTTEEEEEEEEC-CSSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCB
T ss_pred EEEEEecccCCceeeEEEEC-CCCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCcccccccccc
Confidence 45566543 46667766554 45599999999866433212433 5566677789999988422111 11 1111223
Q ss_pred hHH-HHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCcccc
Q 022960 97 YRR-EAEDLRAIVQDFCAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRFNLKR 155 (289)
Q Consensus 97 ~~~-~~~d~~~~i~~l~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~ 155 (289)
+.+ ..+++...|+.--..+.+++.+.|+||||+.|+.++.++|+ +++++.++|.+....
T Consensus 84 ~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~~ 144 (267)
T d1r88a_ 84 WDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSN 144 (267)
T ss_dssp HHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTS
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCCC
Confidence 333 23455554443222256789999999999999999999999 999999999876543
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.40 E-value=2.6e-12 Score=96.98 Aligned_cols=205 Identities=12% Similarity=0.005 Sum_probs=113.2
Q ss_pred cceeeEEeeCCCCc-eEEEEEeecC------CCcEEEEEcCCCCCCCCcchHHHHHHH-HHcCccEEEEccccCCCCCCC
Q 022960 20 VQRRRVVIPNSHGE-KLVGILHETG------SKQLVIVCHGFQSTKDRIPMVNLAAAL-EREGISAFRFDFSGNGESEGS 91 (289)
Q Consensus 20 ~~~~~~~~~~~~g~-~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~~G~G~s~~~ 91 (289)
...+.+++.+.+|. ++.++++.|. +-|+|+++||....... ...+...+ ...++.|+++++++...-...
T Consensus 11 ~~~~~~~~~s~dg~~~~~~~v~~P~~~~~~~~yPvi~~lhG~~~~~~~--~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~ 88 (265)
T d2gzsa1 11 YHFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRL--DDELLKQLSEKTPPVIVAVGYQTNLPFDLN 88 (265)
T ss_dssp EEEEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHHC--CHHHHHHHTTSCCCEEEEEEESSSSSCCHH
T ss_pred ceeEEEEEEcCCCCEEEEEEEEcCCCCCCCCCceEEEEecCcchhhhH--HHHHHHHHHhcCCCeEEEecCCCCCcCccc
Confidence 34667888888884 6777766432 34789999995422211 12222233 345888888888765321100
Q ss_pred ---------------------c--cccchHHHHH-HHHHHHHHHHhc---CCceEEEEEeChhHHHHHHHHHhCCCccEE
Q 022960 92 ---------------------F--LYGNYRREAE-DLRAIVQDFCAK---GRVITAIIGHSKGGNAVLLYASKYNDISIV 144 (289)
Q Consensus 92 ---------------------~--~~~~~~~~~~-d~~~~i~~l~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~v~~~ 144 (289)
. .........+ ...+++.++... +..++.++|+|+||..++.++...+.+.++
T Consensus 89 ~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~~~~f~~~ 168 (265)
T d2gzsa1 89 SRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLSSSYFRSY 168 (265)
T ss_dssp HHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHHCSSCSEE
T ss_pred ccccccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHcCcccCEE
Confidence 0 0001111111 223344555443 345789999999999999877766558888
Q ss_pred EEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEEEEEeCC---
Q 022960 145 INISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVLTIHGTK--- 221 (289)
Q Consensus 145 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~--- 221 (289)
+.++|....... .+...... .........|+++.+|+.
T Consensus 169 ~a~s~~~~~~~~-------~~~~~~~~--------------------------------~~~~~~~~~~~~~~~g~~~~~ 209 (265)
T d2gzsa1 169 YSASPSLGRGYD-------ALLSRVTA--------------------------------VEPLQFCTKHLAIMEGSATQG 209 (265)
T ss_dssp EEESGGGSTTHH-------HHHHHHHT--------------------------------SCTTTTTTCEEEEEECCC---
T ss_pred EEECCcccccch-------hhhhcccc--------------------------------ccccccCCCcEEEEcCCcccc
Confidence 887775432110 00000000 000001256777777766
Q ss_pred -----CCccChhhHHHHHhhC----CCcEEEEEcCCCcccccCchHHHHHHHHHHHhh
Q 022960 222 -----DKMVPAEDALEFDKFI----PNHKLHIIEGADHEFTSHQDELASLVIQFIKAN 270 (289)
Q Consensus 222 -----D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 270 (289)
|..++....+.+.+.+ .+.++.++||++|.. .+...+.+.|...
T Consensus 210 ~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~-----~~~~s~~~~l~~l 262 (265)
T d2gzsa1 210 DNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGP-----MFNASFRQALLDI 262 (265)
T ss_dssp --------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHH-----HHHHHHHHHHHHH
T ss_pred cccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcch-----HHHHHHHHHHHHH
Confidence 5556666666666554 357999999999963 2333444445443
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.38 E-value=1.7e-12 Score=96.66 Aligned_cols=106 Identities=15% Similarity=0.246 Sum_probs=71.8
Q ss_pred cEEEEEcCCCCCCCC-cchHHHHHHHHHc--CccEEEEccccCCCCCCCc-cccchHHHHHHHHHHHHHHHhcCCceEEE
Q 022960 46 QLVIVCHGFQSTKDR-IPMVNLAAALERE--GISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQDFCAKGRVITAI 121 (289)
Q Consensus 46 ~~iv~~hG~~~~~~~-~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~~~l 121 (289)
.+||++||++++... ..+..+.+.+.+. |+.|+++++.....+.... ......+.++.+.+.++... ...+++.+
T Consensus 6 ~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~-~~~~~v~l 84 (279)
T d1ei9a_ 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDP-KLQQGYNA 84 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCG-GGTTCEEE
T ss_pred CcEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhcc-ccccceeE
Confidence 389999999986432 2478888888876 8999999986433221111 01123333444444433221 13457999
Q ss_pred EEeChhHHHHHHHHHhCCC--ccEEEEeccCCc
Q 022960 122 IGHSKGGNAVLLYASKYND--ISIVINISGRFN 152 (289)
Q Consensus 122 ~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~ 152 (289)
|||||||.++-.++.+.+. |..+|.++++..
T Consensus 85 VGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH~ 117 (279)
T d1ei9a_ 85 MGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp EEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred EEEccccHHHHHHHHHcCCCCcceEEEECCCCC
Confidence 9999999999999999876 999999988643
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.36 E-value=1e-12 Score=100.24 Aligned_cols=109 Identities=13% Similarity=0.192 Sum_probs=76.8
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc---CCceE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK---GRVIT 119 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~ 119 (289)
++|++|++||+.++.....+..+...+.++ +++|+++|+.......-...........+.+..+|+.|.+. ..+++
T Consensus 69 ~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~v 148 (337)
T d1rp1a2 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQV 148 (337)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhe
Confidence 689999999999887654566666665554 69999999975321110001122234457777788776554 56799
Q ss_pred EEEEeChhHHHHHHHHHhCCCccEEEEeccCCc
Q 022960 120 AIIGHSKGGNAVLLYASKYNDISIVINISGRFN 152 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~ 152 (289)
+|||||+||.+|..++.+...+..++.++|...
T Consensus 149 hlIGhSLGAhvAG~aG~~~~~l~rItgLDPA~P 181 (337)
T d1rp1a2 149 QLIGHSLGAHVAGEAGSRTPGLGRITGLDPVEA 181 (337)
T ss_dssp EEEEETHHHHHHHHHHHTSTTCCEEEEESCCCT
T ss_pred EEEeecHHHhhhHHHHHhhccccceeccCCCcc
Confidence 999999999999876666555999999988644
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.36 E-value=6.3e-11 Score=89.57 Aligned_cols=129 Identities=16% Similarity=0.199 Sum_probs=78.4
Q ss_pred cceeeEEeeCCCCceEEEEEe-ecC-----CCcEEEEEcCCCCCCCCcc-----hHHHHHHHHHc----CccEEEEcccc
Q 022960 20 VQRRRVVIPNSHGEKLVGILH-ETG-----SKQLVIVCHGFQSTKDRIP-----MVNLAAALERE----GISAFRFDFSG 84 (289)
Q Consensus 20 ~~~~~~~~~~~~g~~l~~~~~-~~~-----~~~~iv~~hG~~~~~~~~~-----~~~~~~~l~~~----G~~v~~~d~~G 84 (289)
-..+.++++..+|.+ .++++ +++ +-|+|+++||.+++...++ ...+...+... .+.|+.++..+
T Consensus 25 g~v~~~~~~~~~~~r-~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 103 (273)
T d1wb4a1 25 GRIVKETYTGINGTK-SLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG 103 (273)
T ss_dssp CEEEEEEEEETTEEE-EEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCS
T ss_pred CeEEEEEEecCCCeE-EEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCC
Confidence 356677888877754 44444 432 3489999999988765421 22333333332 46677777665
Q ss_pred CCCCCCCccccchHHHHHHHHHHHHHH------------HhcCCceEEEEEeChhHHHHHHHHHhCCC-ccEEEEeccCC
Q 022960 85 NGESEGSFLYGNYRREAEDLRAIVQDF------------CAKGRVITAIIGHSKGGNAVLLYASKYND-ISIVINISGRF 151 (289)
Q Consensus 85 ~G~s~~~~~~~~~~~~~~d~~~~i~~l------------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 151 (289)
.+...... ......++...++.- ...+.+++.+.|+|+||..++.+|.++|+ +++++.++|.+
T Consensus 104 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~ 179 (273)
T d1wb4a1 104 GNCTAQNF----YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 179 (273)
T ss_dssp TTCCTTTH----HHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred CCCccccc----hhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccc
Confidence 43322211 111122222111110 01155689999999999999999999999 99999999865
Q ss_pred cc
Q 022960 152 NL 153 (289)
Q Consensus 152 ~~ 153 (289)
..
T Consensus 180 ~~ 181 (273)
T d1wb4a1 180 WY 181 (273)
T ss_dssp CB
T ss_pred cc
Confidence 43
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.31 E-value=5e-12 Score=96.23 Aligned_cols=109 Identities=14% Similarity=0.194 Sum_probs=78.9
Q ss_pred CCcEEEEEcCCCCCCCCcchHHHHHHHHHc-CccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc---CCceE
Q 022960 44 SKQLVIVCHGFQSTKDRIPMVNLAAALERE-GISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK---GRVIT 119 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~~ 119 (289)
++|++|++||+.++.....+..+.+.+.++ .++|+++|+.......-...........+.+..+|+.|... ..+++
T Consensus 69 ~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~v 148 (338)
T d1bu8a2 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPENV 148 (338)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchHHHHHhHHHHHHHHHHHHHHHHHhcCCCccee
Confidence 689999999999887665566666666554 69999999975322110001122344456677777776443 56799
Q ss_pred EEEEeChhHHHHHHHHHhCCC-ccEEEEeccCCc
Q 022960 120 AIIGHSKGGNAVLLYASKYND-ISIVINISGRFN 152 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 152 (289)
+|||||+||.+|-.++...+. +..++.++|...
T Consensus 149 hlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P 182 (338)
T d1bu8a2 149 HLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (338)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEeccHHHHHHHHHHHhhccccccccccccCcC
Confidence 999999999999998888876 999999988643
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.28 E-value=3.1e-10 Score=86.22 Aligned_cols=229 Identities=14% Similarity=0.048 Sum_probs=117.2
Q ss_pred eeEEeeCC-CCceEEEEEeecC-----------CCcEEEEEcCCCCCCCCcchH-HHHHHHHHcCccEEEEcccc-----
Q 022960 23 RRVVIPNS-HGEKLVGILHETG-----------SKQLVIVCHGFQSTKDRIPMV-NLAAALEREGISAFRFDFSG----- 84 (289)
Q Consensus 23 ~~~~~~~~-~g~~l~~~~~~~~-----------~~~~iv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~G----- 84 (289)
..+++.+. -|.+..+.++-|. +-|+|+++||.+++...|... .+.+...+.|..|+.++...
T Consensus 15 ~~~s~~S~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~ 94 (299)
T d1pv1a_ 15 IKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEV 94 (299)
T ss_dssp EEEEEECSSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTS
T ss_pred EEEEEECcccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCccccccc
Confidence 34455443 3556665555332 247999999999886542111 13444555688888876422
Q ss_pred -----------CCCCCCCc-------cccchHH-HHHHHHHHHHHHHhc-------CCceEEEEEeChhHHHHHHHHHhC
Q 022960 85 -----------NGESEGSF-------LYGNYRR-EAEDLRAIVQDFCAK-------GRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 85 -----------~G~s~~~~-------~~~~~~~-~~~d~~~~i~~l~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
.+.+.... ....+.+ ..+++...|+..-.. +.++..|.|+||||+-|+.+|.++
T Consensus 95 ~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~ 174 (299)
T d1pv1a_ 95 ANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKG 174 (299)
T ss_dssp CCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHT
T ss_pred CCcccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHh
Confidence 11111000 0112222 345565555543222 124689999999999999999865
Q ss_pred --CC-ccEEEEeccCCcccccccccccchhHhhhhhcCcccccccccccccccChhhhhhhhccchhhhhcccccCceEE
Q 022960 139 --ND-ISIVINISGRFNLKRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQESLMDRLSTDIHAACHMICQDCRVL 215 (289)
Q Consensus 139 --p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 215 (289)
|+ ..++...++........... ...... +.. ............+.+.. .. ....+++
T Consensus 175 ~~p~~f~~~~s~s~~~~~~~~~~~~---~~~~~~----~g~----~~~~~~~~~~~~l~~~~--------~~-~~~~~i~ 234 (299)
T d1pv1a_ 175 YSGKRYKSCSAFAPIVNPSNVPWGQ---KAFKGY----LGE----EKAQWEAYDPCLLIKNI--------RH-VGDDRIL 234 (299)
T ss_dssp GGGTCCSEEEEESCCCCSTTSHHHH---HHHHHH----SCC--------CGGGCHHHHGGGS--------CC-CTTCCEE
T ss_pred cCCCceEEEeeccCcCCcccccchh---hhhhhh----ccc----chhhhhhcCHHHHHHHh--------hc-cCCccee
Confidence 66 88888888865543211100 000000 000 00000011111111111 00 1135788
Q ss_pred EEEeCCCCccChh-hHHHHHhhC-----CC-cEEEEEcCCCcccccCchHHHHHHHHHHHhhcC
Q 022960 216 TIHGTKDKMVPAE-DALEFDKFI-----PN-HKLHIIEGADHEFTSHQDELASLVIQFIKANYQ 272 (289)
Q Consensus 216 ~i~g~~D~~~~~~-~~~~~~~~~-----~~-~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 272 (289)
+.+|++|...+.. ..+.+.+.+ +. .++...+|.+|.... -.......++|+.+.++
T Consensus 235 ~~~G~~D~~~~~~~~~~~f~~~~~~~g~~~~~~~~~~~G~~Hsw~y-W~~~i~~~l~f~a~~lg 297 (299)
T d1pv1a_ 235 IHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYF-VSTFVPEHAEFHARNLG 297 (299)
T ss_dssp EECCTTCTTTTTTCCTHHHHHHHTTSTTTTSEEEECCTTCCSSHHH-HHHHHHHHHHHHHHHTT
T ss_pred EecCCCCcchhhhhcHHHHHHHHHhcCCCcceEEEecCCCCcCHHH-HHHHHHHHHHHHHHhcC
Confidence 8899999877643 234444332 22 466667887898421 13445555678777653
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.10 E-value=4.8e-08 Score=78.07 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=87.7
Q ss_pred ccceeeEEeeCCC-CceEEEEEeec----CCCcEEEEEcCCCCCCCCcchHHHHHH-----------------HHHcCcc
Q 022960 19 VVQRRRVVIPNSH-GEKLVGILHET----GSKQLVIVCHGFQSTKDRIPMVNLAAA-----------------LEREGIS 76 (289)
Q Consensus 19 ~~~~~~~~~~~~~-g~~l~~~~~~~----~~~~~iv~~hG~~~~~~~~~~~~~~~~-----------------l~~~G~~ 76 (289)
.+..-...++..+ +..+.+++++. .+.|+||++-|++|++. ++..+.+. +.+. .+
T Consensus 13 ~~~~ysGyl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS--~~g~~~e~GP~~i~~~~~~~~N~~sW~~~-an 89 (421)
T d1wpxa1 13 NVTQYTGYLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSS--LTGLFFELGPSSIGPDLKPIGNPYSWNSN-AT 89 (421)
T ss_dssp SSCEEEEEEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCT--HHHHHHTTSSEEECTTSCEEECTTCGGGS-SE
T ss_pred CCceeeeeeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHH--HHHHHHhcCCcEECCCCccccCCcccccc-cC
Confidence 3444455666543 56788887754 36899999999999874 34433321 2222 57
Q ss_pred EEEEccc-cCCCCCC-CccccchHHHHHHHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhC-----CC--c
Q 022960 77 AFRFDFS-GNGESEG-SFLYGNYRREAEDLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKY-----ND--I 141 (289)
Q Consensus 77 v~~~d~~-G~G~s~~-~~~~~~~~~~~~d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~-----p~--v 141 (289)
++-+|.| |.|-|.. .....+-...++|+.++++.+.+. ...+++|.|-|+||..+..+|... +. +
T Consensus 90 llfiD~PvGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inl 169 (421)
T d1wpxa1 90 VIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNL 169 (421)
T ss_dssp EEEECCSTTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCC
T ss_pred EEEEecCCCCCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcce
Confidence 9999965 8888843 223334456667777777655443 234799999999999887777542 22 7
Q ss_pred cEEEEeccCCcc
Q 022960 142 SIVINISGRFNL 153 (289)
Q Consensus 142 ~~~v~~~~~~~~ 153 (289)
+++++.+|..+.
T Consensus 170 kGi~iGng~~dp 181 (421)
T d1wpxa1 170 TSVLIGNGLTDP 181 (421)
T ss_dssp CEEEEESCCCCH
T ss_pred eeeEecCCcccc
Confidence 899999986653
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=1.3e-08 Score=82.37 Aligned_cols=132 Identities=14% Similarity=0.012 Sum_probs=90.1
Q ss_pred ccceeeEEeeCCCCceEEEEEeecC----CCcEEEEEcCCCCCCCCcchHHHHHH------------------HHHcCcc
Q 022960 19 VVQRRRVVIPNSHGEKLVGILHETG----SKQLVIVCHGFQSTKDRIPMVNLAAA------------------LEREGIS 76 (289)
Q Consensus 19 ~~~~~~~~~~~~~g~~l~~~~~~~~----~~~~iv~~hG~~~~~~~~~~~~~~~~------------------l~~~G~~ 76 (289)
.+..-...+...++..+.+++++.. +.|+++++-|++|++. ++..+.+. +.+. .+
T Consensus 18 ~~~~ysGyl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS--~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~-an 94 (452)
T d1ivya_ 18 SFRQYSGYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS--LDGLLTEHGPFLVQPDGVTLEYNPYSWNLI-AN 94 (452)
T ss_dssp SSCEEEEEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT--HHHHHTTTSSEEECTTSSCEEECTTCGGGS-SE
T ss_pred CccceeeeeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH--HHHHHHccCCcEEcCCCCeeccCCcchhcc-cC
Confidence 3445566777777888998888653 5789999999999874 34333221 2222 57
Q ss_pred EEEEccc-cCCCCCCCc--cccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHh---CCC--ccEE
Q 022960 77 AFRFDFS-GNGESEGSF--LYGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASK---YND--ISIV 144 (289)
Q Consensus 77 v~~~d~~-G~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~---~p~--v~~~ 144 (289)
++-+|.| |.|-|.... ...+..+.+.|+.+++..+-+. ...+++|.|-|+||..+..+|.. .+. ++++
T Consensus 95 llfIDqPvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi 174 (452)
T d1ivya_ 95 VLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGL 174 (452)
T ss_dssp EEEECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred EEEEecCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccce
Confidence 8999986 899885432 2334456667776655444333 34589999999999988887754 233 8999
Q ss_pred EEeccCCcc
Q 022960 145 INISGRFNL 153 (289)
Q Consensus 145 v~~~~~~~~ 153 (289)
++.+|..+.
T Consensus 175 ~igng~~d~ 183 (452)
T d1ivya_ 175 AVGNGLSSY 183 (452)
T ss_dssp EEESCCSBH
T ss_pred EcCCCccCc
Confidence 999997653
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.07 E-value=4e-10 Score=85.92 Aligned_cols=140 Identities=15% Similarity=0.121 Sum_probs=79.8
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCCC-cc-EEEEeccCCcc-cccccccccchhHhhhhhcCcccccccccccccccChh
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKYND-IS-IVINISGRFNL-KRGIEGRLGLGYLQRIKQNGFIDVRNKKGKLEYRVTQE 191 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-v~-~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (289)
+.++|.|.|+|+||++|+.++..+|+ ++ ++.++++.... .... .. ..... ..........
T Consensus 9 Dp~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p~~ca~~~--~~----~~~~~-----------~~~~~~~~~~ 71 (318)
T d2d81a1 9 NPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQ--YY----TSCMY-----------NGYPSITTPT 71 (318)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSS--CG----GGGST-----------TCCCCCHHHH
T ss_pred CccceEEEEECHHHHHHHHHHHhcccceeeeEEEeccCchhhhccc--ch----HHHhh-----------cCCCCCcChh
Confidence 45689999999999999999999999 75 44444442211 1000 00 00000 0000000011
Q ss_pred hhhhhhccchhhhhcccccCceEEEEEeCCCCccChhhHHHHHhhCCC------cEEEEEcCCCcccccC----------
Q 022960 192 SLMDRLSTDIHAACHMICQDCRVLTIHGTKDKMVPAEDALEFDKFIPN------HKLHIIEGADHEFTSH---------- 255 (289)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~gH~~~~~---------- 255 (289)
................ ....|++++||++|..||+..++.+.+.+.. .+++..+++||.+...
T Consensus 72 ~~~~~~~~~~i~~~~~-~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~~~g~g~~~c~ 150 (318)
T d2d81a1 72 ANMKSWSGNQIASVAN-LGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCS 150 (318)
T ss_dssp HHHHHHBTTTBCCGGG-GGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTT
T ss_pred HHHHHHhhcCCcchhc-cCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCCCCCccccccc
Confidence 1111111111111110 1267999999999999999999888877642 5677889999996421
Q ss_pred ---c-------hHHHHHHHHHHHhhcC
Q 022960 256 ---Q-------DELASLVIQFIKANYQ 272 (289)
Q Consensus 256 ---~-------~~~~~~i~~fl~~~~~ 272 (289)
. -+-..+|++||-..+.
T Consensus 151 ~~~~pyi~~C~~d~a~~iL~~~yg~~~ 177 (318)
T d2d81a1 151 LSTSPYISNCNYDGAGAALKWIYGSLN 177 (318)
T ss_dssp SCCTTCEEECSSCHHHHHHHHHHSSCC
T ss_pred ccCChhhhcCCCcHHHHHHHHHhcccC
Confidence 0 1235788888866554
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.89 E-value=9.7e-08 Score=77.55 Aligned_cols=118 Identities=11% Similarity=0.092 Sum_probs=74.4
Q ss_pred ceEEEEEeecC------CCcEEEEEcCCCCCCCCcchHHHHHH-----------------HHHcCccEEEEccc-cCCCC
Q 022960 33 EKLVGILHETG------SKQLVIVCHGFQSTKDRIPMVNLAAA-----------------LEREGISAFRFDFS-GNGES 88 (289)
Q Consensus 33 ~~l~~~~~~~~------~~~~iv~~hG~~~~~~~~~~~~~~~~-----------------l~~~G~~v~~~d~~-G~G~s 88 (289)
..+.+++++.. +.|++|++-|++|++. ++..+.+. +.+. .+++.+|.| |.|-|
T Consensus 49 ~~~ffw~fe~~~~~~~~~~Pl~lWlnGGPGcSS--~~g~f~E~GP~~v~~~~~l~~Np~SWn~~-an~lfIDqPvGvGfS 125 (483)
T d1ac5a_ 49 LEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSS--MDGALVESGPFRVNSDGKLYLNEGSWISK-GDLLFIDQPTGTGFS 125 (483)
T ss_dssp CEEEEEEEECSCSGGGSSCCEEEEECCTTTBCT--HHHHHHSSSSEEECTTSCEEECTTCGGGT-SEEEEECCSTTSTTC
T ss_pred ceEEEEEEEecCCCCCCCCCEEEEECCCCcHHH--HHHHHHccCCeEECCCCceeeCCCccccc-CCEEEEeCCCCcCee
Confidence 35666665432 2589999999999874 23222211 1222 578999976 88887
Q ss_pred CCCc----------cccchHHHHHHHHHHHHHHHhc----CCceEEEEEeChhHHHHHHHHHhC-----------CC--c
Q 022960 89 EGSF----------LYGNYRREAEDLRAIVQDFCAK----GRVITAIIGHSKGGNAVLLYASKY-----------ND--I 141 (289)
Q Consensus 89 ~~~~----------~~~~~~~~~~d~~~~i~~l~~~----~~~~~~l~G~S~Gg~~a~~~a~~~-----------p~--v 141 (289)
-... ...+..+.+.++..+++..-+. ...+++|.|-|+||..+-.+|..- +. +
T Consensus 126 y~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inL 205 (483)
T d1ac5a_ 126 VEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDL 205 (483)
T ss_dssp SSCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEE
T ss_pred ecCCCCccccccccccCCHHHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccc
Confidence 4321 1223345566666666544332 335899999999998877777542 22 8
Q ss_pred cEEEEeccCCcc
Q 022960 142 SIVINISGRFNL 153 (289)
Q Consensus 142 ~~~v~~~~~~~~ 153 (289)
+++.+.+|+.+.
T Consensus 206 kGi~IGNg~~d~ 217 (483)
T d1ac5a_ 206 KALLIGNGWIDP 217 (483)
T ss_dssp EEEEEEEECCCH
T ss_pred eeeeecCCccCh
Confidence 899988886543
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.81 E-value=3.1e-09 Score=82.77 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=68.8
Q ss_pred CCcEEEEEcCCCCCCCC-----cchHH----HHHHHHHcCccEEEEccccCCCCCCCccccchHHHHHHHHHHHHHHHhc
Q 022960 44 SKQLVIVCHGFQSTKDR-----IPMVN----LAAALEREGISAFRFDFSGNGESEGSFLYGNYRREAEDLRAIVQDFCAK 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~-----~~~~~----~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~ 114 (289)
++-+|||+||+.+-... .+|.. +.+.|.+.|+.|++...... .+.++-++++...|+.....
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~---------~S~~~RA~eL~~~I~~~~~d 76 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL---------SSNWDRACEAYAQLVGGTVD 76 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSS---------BCHHHHHHHHHHHHHCEEEE
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCc---------cCHHHHHHHHHHHHhhhhhh
Confidence 45589999998764321 24543 88899999999999987633 23345555565555432110
Q ss_pred --------------------------CCceEEEEEeChhHHHHHHHHHhCC-------------------------C-cc
Q 022960 115 --------------------------GRVITAIIGHSKGGNAVLLYASKYN-------------------------D-IS 142 (289)
Q Consensus 115 --------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p-------------------------~-v~ 142 (289)
...+|+||||||||..+-.++...+ + |+
T Consensus 77 ~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~ 156 (388)
T d1ku0a_ 77 YGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVL 156 (388)
T ss_dssp CCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEE
T ss_pred hhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceE
Confidence 1248999999999999988876432 3 89
Q ss_pred EEEEeccCCc
Q 022960 143 IVINISGRFN 152 (289)
Q Consensus 143 ~~v~~~~~~~ 152 (289)
++..++++..
T Consensus 157 SvTTIsTPH~ 166 (388)
T d1ku0a_ 157 SVTTIATPHD 166 (388)
T ss_dssp EEEEESCCTT
T ss_pred EEEeccCCCC
Confidence 9999987653
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=8e-08 Score=79.30 Aligned_cols=106 Identities=17% Similarity=0.116 Sum_probs=71.7
Q ss_pred CcEEEEEcCCCCCCCCcchHHHHHHHHHcCccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc------
Q 022960 45 KQLVIVCHGFQSTKDRIPMVNLAAALEREGISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK------ 114 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~------ 114 (289)
.|++|+|||++....+.....-...+++.+.-|+++++| |+-.........+ .-..|...+++|++++
T Consensus 113 lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN--~Gl~Dq~~AL~WV~~nI~~FGG 190 (532)
T d2h7ca1 113 LPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGN--WGHLDQVAALRWVQDNIASFGG 190 (532)
T ss_dssp EEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCC--HHHHHHHHHHHHHHHHGGGGTE
T ss_pred cEEEEEEeCCcccccccccCCchhhhhcCceEEEEEeeccCCCccccccccccccc--cccHHHHHHHHHHHHHHHHhcC
Confidence 589999999875433211112223446668999999999 4433222222222 2357888999999886
Q ss_pred CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCc
Q 022960 115 GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRFN 152 (289)
Q Consensus 115 ~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 152 (289)
+.++|.|+|+|.||..+..++... .. +.++|+.++...
T Consensus 191 Dp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 191 NPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CcceeeeeccccccchHHHHHhhhhccCcchhhhhhccccc
Confidence 567999999999998887776543 23 899999987543
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.66 E-value=5.7e-08 Score=79.19 Aligned_cols=118 Identities=12% Similarity=0.023 Sum_probs=75.5
Q ss_pred EEEEEeecC----CCcEEEEEcCCCCCCCC--cchHHHHHHHHHcCccEEEEccc----cCCCCCCCccccchHHHHHHH
Q 022960 35 LVGILHETG----SKQLVIVCHGFQSTKDR--IPMVNLAAALEREGISAFRFDFS----GNGESEGSFLYGNYRREAEDL 104 (289)
Q Consensus 35 l~~~~~~~~----~~~~iv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~ 104 (289)
|+..++.|. +.|++|+|||++....+ .........+.+.++.|+.+++| |+-..........-..-..|.
T Consensus 82 L~lni~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq 161 (483)
T d1qe3a_ 82 LYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQ 161 (483)
T ss_dssp CEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHH
T ss_pred CEEEEEECCCCCCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccccHHH
Confidence 444455442 56899999998744321 11222233444557999999999 443222111111112225788
Q ss_pred HHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCc
Q 022960 105 RAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRFN 152 (289)
Q Consensus 105 ~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 152 (289)
..+++|++++ +.++|.|+|+|.||..+..++... .. +.++|+.++...
T Consensus 162 ~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 162 AAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASR 218 (483)
T ss_dssp HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcc
Confidence 8999999887 567999999999999988776543 23 899999998653
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.50 E-value=2e-07 Score=76.88 Aligned_cols=116 Identities=20% Similarity=0.094 Sum_probs=74.8
Q ss_pred EEEEEeecC----CCcEEEEEcCCCCCCCC--cchHHHHHHHHHcCccEEEEccc----cCCCCCCCc-cccchHHHHHH
Q 022960 35 LVGILHETG----SKQLVIVCHGFQSTKDR--IPMVNLAAALEREGISAFRFDFS----GNGESEGSF-LYGNYRREAED 103 (289)
Q Consensus 35 l~~~~~~~~----~~~~iv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~----G~G~s~~~~-~~~~~~~~~~d 103 (289)
|+..++.|. +.|++|+|||++....+ .........+++.++-|+.+++| |+-...... ...++ -..|
T Consensus 92 L~LnI~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~--Gl~D 169 (532)
T d1ea5a_ 92 LYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNV--GLLD 169 (532)
T ss_dssp CEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCH--HHHH
T ss_pred CEEEEEeCCCCCCCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCCCCcc--cchh
Confidence 444455443 56999999998632211 11122233345668999999999 443332111 11222 3578
Q ss_pred HHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhC---CCccEEEEeccCCc
Q 022960 104 LRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKY---NDISIVINISGRFN 152 (289)
Q Consensus 104 ~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~---p~v~~~v~~~~~~~ 152 (289)
...+++|++++ +.++|.|+|+|.||..+..++... +-+.++|+.++...
T Consensus 170 q~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 170 QRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 88999999887 567999999999999887766542 22899999887643
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.46 E-value=3.6e-07 Score=75.33 Aligned_cols=108 Identities=16% Similarity=0.067 Sum_probs=68.0
Q ss_pred CCcEEEEEcCCCCCCCCc-ch--HHHHH--HHHHcCccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc
Q 022960 44 SKQLVIVCHGFQSTKDRI-PM--VNLAA--ALEREGISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~-~~--~~~~~--~l~~~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~ 114 (289)
+.|++|+|||++....+. .+ ..+.. .+..+++-|+++++| |+-..........-..-..|...+++|++++
T Consensus 113 ~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~n 192 (534)
T d1llfa_ 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADN 192 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccccccchhHHHHHHHHHHhh
Confidence 568999999988543321 11 22332 234568899999999 3322210000000012357888999999887
Q ss_pred ------CCceEEEEEeChhHHHHHHHHHh-----CCC----ccEEEEeccCC
Q 022960 115 ------GRVITAIIGHSKGGNAVLLYASK-----YND----ISIVINISGRF 151 (289)
Q Consensus 115 ------~~~~~~l~G~S~Gg~~a~~~a~~-----~p~----v~~~v~~~~~~ 151 (289)
+.++|.|+|+|.||..+...+.. .|. +.++|+.++..
T Consensus 193 I~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 193 IAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred hhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 56799999999999976654431 121 89999998754
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=5.7e-07 Score=73.96 Aligned_cols=115 Identities=17% Similarity=0.065 Sum_probs=72.9
Q ss_pred EEEEEeecC----CCcEEEEEcCCCCCCCC---cchHHHHHHHHHcCccEEEEccc----cCCCCCCC-ccccchHHHHH
Q 022960 35 LVGILHETG----SKQLVIVCHGFQSTKDR---IPMVNLAAALEREGISAFRFDFS----GNGESEGS-FLYGNYRREAE 102 (289)
Q Consensus 35 l~~~~~~~~----~~~~iv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~----G~G~s~~~-~~~~~~~~~~~ 102 (289)
|+..++.|. +.|++|+|||++....+ ..+. .....++.++.|+.+++| |+-..... ....+ .-..
T Consensus 90 L~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~-~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN--~Gl~ 166 (526)
T d1p0ia_ 90 LYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYD-GKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGN--MGLF 166 (526)
T ss_dssp CEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGC-THHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSC--HHHH
T ss_pred CEEEEEeCCCCCCCCceEEEEECCCcccccCcccccC-ccccccccceeEEecccccccccccCCCCccccccc--cccc
Confidence 444455443 55899999998754321 1122 112223458999999999 43322111 11112 2357
Q ss_pred HHHHHHHHHHhc------CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCCc
Q 022960 103 DLRAIVQDFCAK------GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRFN 152 (289)
Q Consensus 103 d~~~~i~~l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 152 (289)
|...+++|++++ +.++|.|+|+|.||..+..++... .. +.++|+.++...
T Consensus 167 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 167 DQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred chhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 888999999876 567999999999999987655432 12 889998887543
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.43 E-value=4.4e-07 Score=74.97 Aligned_cols=105 Identities=17% Similarity=0.067 Sum_probs=70.4
Q ss_pred CCcEEEEEcCCCCC---CCCcchHHHHHHHHHcCccEEEEccc----cCCCCCCCc-cccchHHHHHHHHHHHHHHHhc-
Q 022960 44 SKQLVIVCHGFQST---KDRIPMVNLAAALEREGISAFRFDFS----GNGESEGSF-LYGNYRREAEDLRAIVQDFCAK- 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~---~~~~~~~~~~~~l~~~G~~v~~~d~~----G~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~- 114 (289)
+.|++|+|||++.. .....+.. ....++.++.|+++++| |+-.+.... ...+ .-..|...+++|++++
T Consensus 111 ~lPV~v~ihGG~~~~gs~~~~~~~~-~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN--~Gl~Dq~~AL~WV~~nI 187 (542)
T d2ha2a1 111 PTPVLIWIYGGGFYSGAASLDVYDG-RFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGN--VGLLDQRLALQWVQENI 187 (542)
T ss_dssp CEEEEEEECCSTTTCCCTTSGGGCT-HHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSC--HHHHHHHHHHHHHHHHG
T ss_pred CCcEEEEEEECccccccCcccccCc-hhhhhhccceeEeeeeeccceeeecccccccCCCc--CCcccHHHHHHHHHHHH
Confidence 45899999998643 22212222 12233458999999999 553322111 1122 2357889999999877
Q ss_pred -----CCceEEEEEeChhHHHHHHHHHhCC--C-ccEEEEeccCC
Q 022960 115 -----GRVITAIIGHSKGGNAVLLYASKYN--D-ISIVINISGRF 151 (289)
Q Consensus 115 -----~~~~~~l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~ 151 (289)
+.++|.|+|+|.||..+..++.... . +.++|+.++..
T Consensus 188 ~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 188 AAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 5679999999999999887766542 2 89999998754
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.41 E-value=6.8e-07 Score=73.75 Aligned_cols=108 Identities=14% Similarity=0.070 Sum_probs=69.3
Q ss_pred CCcEEEEEcCCCCCCCCcc---hHHH-HHHHH-HcCccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc
Q 022960 44 SKQLVIVCHGFQSTKDRIP---MVNL-AAALE-REGISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK 114 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~~---~~~~-~~~l~-~~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~ 114 (289)
+.|++|+|||++....+.. ...+ ...++ ..++-|+++++| |+-.............-..|...+++|++++
T Consensus 121 ~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~n 200 (544)
T d1thga_ 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDN 200 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhhhh
Confidence 4589999999885543211 1222 23343 457889999999 3322211000001122357889999999887
Q ss_pred ------CCceEEEEEeChhHHHHHHHHHhC--------CC-ccEEEEeccCC
Q 022960 115 ------GRVITAIIGHSKGGNAVLLYASKY--------ND-ISIVINISGRF 151 (289)
Q Consensus 115 ------~~~~~~l~G~S~Gg~~a~~~a~~~--------p~-v~~~v~~~~~~ 151 (289)
+.++|.|+|+|.||..+..++... .. +.++|+.++..
T Consensus 201 I~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 201 IANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 567999999999998777666532 12 89999998753
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.35 E-value=9.2e-07 Score=72.50 Aligned_cols=107 Identities=17% Similarity=0.087 Sum_probs=66.9
Q ss_pred CcEEEEEcCCCCCCCC---cchHHHHHHHHHcCccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHHHhc---
Q 022960 45 KQLVIVCHGFQSTKDR---IPMVNLAAALEREGISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDFCAK--- 114 (289)
Q Consensus 45 ~~~iv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--- 114 (289)
.|++|++||++....+ +...... ...+.++.|+.+++| |+-.+........-..-..|...+++|++++
T Consensus 97 ~PV~v~ihGG~~~~G~~~~~~~~~~~-~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~~ 175 (517)
T d1ukca_ 97 LPVWLFIQGGGYAENSNANYNGTQVI-QASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQ 175 (517)
T ss_dssp EEEEEEECCSTTTSCCSCSCCCHHHH-HHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGG
T ss_pred ceEEEEEcCCccccCCCccccchhhh-hhhccccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHHHh
Confidence 4899999998743321 1222222 122346788999999 3322211000111122357889999999887
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhC----CC-ccEEEEeccCCc
Q 022960 115 ---GRVITAIIGHSKGGNAVLLYASKY----ND-ISIVINISGRFN 152 (289)
Q Consensus 115 ---~~~~~~l~G~S~Gg~~a~~~a~~~----p~-v~~~v~~~~~~~ 152 (289)
+.++|.|+|+|.||..+...+... .. +.++|+.++...
T Consensus 176 FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 176 FGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred hcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 567999999999998876554431 23 899999988643
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.20 E-value=5.2e-06 Score=68.81 Aligned_cols=107 Identities=12% Similarity=-0.020 Sum_probs=68.1
Q ss_pred CCcEEEEEcCCCCCC---CCcchHHHHHHHH-HcCccEEEEccc----cCCCCCCC-----ccccchHHHHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTK---DRIPMVNLAAALE-REGISAFRFDFS----GNGESEGS-----FLYGNYRREAEDLRAIVQD 110 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~---~~~~~~~~~~~l~-~~G~~v~~~d~~----G~G~s~~~-----~~~~~~~~~~~d~~~~i~~ 110 (289)
+.|++|+|||++... ....+. ...|+ +.+.-|+++++| |+-..... .....-..-..|...+++|
T Consensus 138 ~lPV~V~ihGG~f~~Gs~~~~~~~--~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~W 215 (571)
T d1dx4a_ 138 GLPILIWIYGGGFMTGSATLDIYN--ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 215 (571)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGC--CHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCccCCCCcccccc--hhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHHH
Confidence 458999999987432 211122 23343 335788899998 33211100 0000012225789999999
Q ss_pred HHhc------CCceEEEEEeChhHHHHHHHHHhCC--C-ccEEEEeccCCc
Q 022960 111 FCAK------GRVITAIIGHSKGGNAVLLYASKYN--D-ISIVINISGRFN 152 (289)
Q Consensus 111 l~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~~ 152 (289)
++++ +.++|.|+|+|.||..+..++.... . +.++|+.++...
T Consensus 216 V~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 216 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 9887 5679999999999999887665432 2 889998887544
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.20 E-value=2.5e-06 Score=70.89 Aligned_cols=106 Identities=18% Similarity=0.112 Sum_probs=67.7
Q ss_pred CCcEEEEEcCCCCCCCCc-------chHHHHHHHHHc-CccEEEEccc----cCCCCCCCccccchHHHHHHHHHHHHHH
Q 022960 44 SKQLVIVCHGFQSTKDRI-------PMVNLAAALERE-GISAFRFDFS----GNGESEGSFLYGNYRREAEDLRAIVQDF 111 (289)
Q Consensus 44 ~~~~iv~~hG~~~~~~~~-------~~~~~~~~l~~~-G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l 111 (289)
+.|++|+|||++....+. .+..-...|+.. ++-|+.+++| |+-.........+ .-..|...+++|+
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~gN--~Gl~Dq~~AL~WV 174 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGN--YGLWDQHMAIAWV 174 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCC--HHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCCCcc--chhhHHHHHHHHH
Confidence 358999999986422110 000012344443 5889999999 4432222111111 2257888889998
Q ss_pred Hhc------CCceEEEEEeChhHHHHHHHHHhC--CC-ccEEEEeccCC
Q 022960 112 CAK------GRVITAIIGHSKGGNAVLLYASKY--ND-ISIVINISGRF 151 (289)
Q Consensus 112 ~~~------~~~~~~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~ 151 (289)
+++ +.++|.|+|+|.||..+..++... .. +.++|+.++..
T Consensus 175 ~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 175 KRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred hhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 877 567999999999998887766542 23 89999998754
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=97.20 E-value=0.002 Score=47.23 Aligned_cols=41 Identities=27% Similarity=0.344 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHhC
Q 022960 98 RREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASKY 138 (289)
Q Consensus 98 ~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~~ 138 (289)
....+++...++.+.++ ..-++++.|||+||.+|..++...
T Consensus 118 ~~~~~~v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 118 RSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHHH
Confidence 33445666666655444 445899999999999999988754
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=97.04 E-value=0.00064 Score=49.77 Aligned_cols=40 Identities=25% Similarity=0.321 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHh
Q 022960 98 RREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 98 ~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
....+++...++.+.+. +..++++.|||+||.+|..++..
T Consensus 113 ~~~~~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 113 EQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 34445566666555444 44589999999999999888764
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.98 E-value=0.00077 Score=49.19 Aligned_cols=40 Identities=18% Similarity=0.296 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHh
Q 022960 98 RREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 98 ~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
....+++...++.+..+ +..++++.|||+||.+|..++..
T Consensus 105 ~~i~~~i~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 105 ISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 33445666666666554 44489999999999999987765
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=96.97 E-value=0.01 Score=41.30 Aligned_cols=90 Identities=10% Similarity=0.092 Sum_probs=53.0
Q ss_pred EEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccCCCCC--CC-ccccchHHHHHHHHHHHHHHHhc-CCceEE
Q 022960 47 LVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNGESE--GS-FLYGNYRREAEDLRAIVQDFCAK-GRVITA 120 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~--~~-~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~ 120 (289)
.||+.-|-+..........+...+.+. |..+..++||...... +. ....+...-+.++...|+....+ ...+++
T Consensus 6 ~vi~aRGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T d1qoza_ 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEecCCCCCCCCCcchHHHHHHHHhCCCCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 456666665554322244555555443 5667888888643221 11 11112223345566666665555 566999
Q ss_pred EEEeChhHHHHHHHHH
Q 022960 121 IIGHSKGGNAVLLYAS 136 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~ 136 (289)
|+|+|.|+.++-.++.
T Consensus 86 l~GYSQGA~V~~~~l~ 101 (207)
T d1qoza_ 86 LVGYSQGAQIFDNALC 101 (207)
T ss_dssp EEEETHHHHHHHHHHH
T ss_pred EEeeccchHHHHHHHh
Confidence 9999999999988764
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.93 E-value=0.0009 Score=48.99 Aligned_cols=40 Identities=35% Similarity=0.390 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHh
Q 022960 98 RREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 98 ~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
.....++...+..+.++ +..++++.|||+||.+|..++..
T Consensus 112 ~~v~~~i~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 112 GEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 33344555555444333 55689999999999999987754
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.93 E-value=0.00067 Score=49.84 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHHh
Q 022960 98 RREAEDLRAIVQDFCAK-GRVITAIIGHSKGGNAVLLYASK 137 (289)
Q Consensus 98 ~~~~~d~~~~i~~l~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 137 (289)
.....++...++.+... ...++++.|||+||.+|..++..
T Consensus 117 ~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 117 KLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 33445666666655444 44589999999999999988765
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=96.88 E-value=0.016 Score=39.94 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=58.7
Q ss_pred EEEEEcCCCCCCCC-cchHHHHHHHHHc----CccEEEEccccCCCCCCCc-cccchHHHHHHHHHHHHHHHhc-CCceE
Q 022960 47 LVIVCHGFQSTKDR-IPMVNLAAALERE----GISAFRFDFSGNGESEGSF-LYGNYRREAEDLRAIVQDFCAK-GRVIT 119 (289)
Q Consensus 47 ~iv~~hG~~~~~~~-~~~~~~~~~l~~~----G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~-~~~~~ 119 (289)
.||+.-|-+..... ..-..+.+.|... +..+..++++.-....... ...+...-+.++...+.....+ ...++
T Consensus 19 ~vi~aRGT~E~~~~G~~g~~~~~~l~~~~~~~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP~tki 98 (197)
T d1cexa_ 19 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATL 98 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEecCCCCCCCCCcccHHHHHHHHHhcCCCcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhCCCCeE
Confidence 45666665544321 1233455555433 3445555554221111000 1112233456666666666555 56699
Q ss_pred EEEEeChhHHHHHHHHHhCC-----CccEEEEeccC
Q 022960 120 AIIGHSKGGNAVLLYASKYN-----DISIVINISGR 150 (289)
Q Consensus 120 ~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~ 150 (289)
+|+|+|.|+.++-.++...+ +|.++++++-+
T Consensus 99 VL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 99 IAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp EEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred EEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 99999999999998887653 28888888743
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=96.56 E-value=0.023 Score=39.53 Aligned_cols=90 Identities=11% Similarity=0.138 Sum_probs=51.7
Q ss_pred EEEEEcCCCCCCCCcchHHHHHHHHHc--CccEEEEccccCCCCC-C--CccccchHHHHHHHHHHHHHHHhc-CCceEE
Q 022960 47 LVIVCHGFQSTKDRIPMVNLAAALERE--GISAFRFDFSGNGESE-G--SFLYGNYRREAEDLRAIVQDFCAK-GRVITA 120 (289)
Q Consensus 47 ~iv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~-~--~~~~~~~~~~~~d~~~~i~~l~~~-~~~~~~ 120 (289)
.||+..|-+..........+...+.+. |-.+..++||...... . .....+..+-+..+...|....++ ...+++
T Consensus 6 ~vi~arGT~E~~~~G~~~~~~~~~~~~~~~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~v 85 (207)
T d1g66a_ 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEeCCCCCCCCCCccHHHHHHHHHhcCCCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence 456666666433222234444444433 5678888888532211 1 111112233345566666655555 556999
Q ss_pred EEEeChhHHHHHHHHH
Q 022960 121 IIGHSKGGNAVLLYAS 136 (289)
Q Consensus 121 l~G~S~Gg~~a~~~a~ 136 (289)
|+|+|.|+.++-.++.
T Consensus 86 l~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 86 LVGYSQGGEIMDVALC 101 (207)
T ss_dssp EEEETHHHHHHHHHHH
T ss_pred EEeeccccHHHHHHHh
Confidence 9999999999988764
|