Citrus Sinensis ID: 022973

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
MASTQTPSLILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHGGKDNDDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGKGKGGK
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEEccccEEEEEEccccccHHHHHHHHHHHHHHHHHHccccccEEEEcccEEEEEccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHccccccccEEEcccccEEEEEEccccccHHHHHHHHHHHHHHHHHHccccccEEEEcccEEEEEccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEccccccccccccccEcccccccccHHHHHHHHHHHHHHHHHcccccHHHHcccccEEEEEEEEcccccHHHHHHHHHHHHHHccHHcccccccEEEccccEEEEEEEcccccccccccccccccccHEEEEEEHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MASTQTPSLILLLLLLLTTLsilttpsssstetfvfggcsqqkytpgsayenSVNSMLTSLVNSAmfssynnftiQGQQTLYGLFqcrgdlstadcgrCVAHAVSQLGTLcldscggvlqldgcfvkydnisflgvedktvvvkkcgpligydsdastrRDAVLGYlgssdgsykpyrvggsgdvtGVAQCvgdlsaseCQDCLSDAIGRLktdcgaakwGDMFLAKCYARyseggdhshggkdndddndEEIEKTLAILIGMIAGIALLVIFLSSIRRlcdgkgkggk
Flexible Loop (DISEMBL)
MASTQTPSLILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFlgvedktvvVKKCGPligydsdastrrDAVLGYlgssdgsykpYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSeggdhshggkdndddNDEEIEKTLAILIGMIAGIALLVIFLSSIRrlcdgkgkggk
Low Complexity Region (SEG)
MAstqtpslilllllllttlsilttpsssstETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEggdhshggkdndddndEEIEKTlailigmiagiallVIFLSSIRRLCDGKGKGGK
Disordered region (IsUnstruct)
********LILLLLLLLTTLSILTTP****TETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARY*********************EKTLAILIGMIAGIALLVIFLSSIRRLC********
Disordered Region (DISOPRED)
**********LLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGG*********************AILIGMIAGIALLVIFLSSIR****G******
Disordered Region (DISEMBL)
MASTQTPSLILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYS*************DDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGKGKGGK
Disordered Region (DISPRO)
***TQTPSLILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHG***********IEKTLAILIGMIAGIALLVIFLSSIRRLCDGK*****
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASTQTPSLILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHGGKDNDDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGKGKGGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	289	2.2.26 [Sep-21-2011]
Q9ZU94	288	Cysteine-rich repeat secr	yes	no	0.944	0.947	0.6	5e-93
Q0WPN8	298	Cysteine-rich repeat secr	no	no	0.944	0.916	0.587	3e-81
Q8GUJ2	299	Cysteine-rich repeat secr	no	no	0.941	0.909	0.489	8e-66
Q6NKQ9	279	Cysteine-rich repeat secr	no	no	0.837	0.867	0.402	3e-48
Q6NM73	307	Cysteine-rich repeat secr	no	no	0.958	0.902	0.264	1e-22
O22784	304	Cysteine-rich repeat secr	no	no	0.972	0.924	0.267	1e-22
Q5Q0E2	324	Cysteine-rich repeat secr	no	no	0.678	0.604	0.303	9e-19
Q9SH41	284	Putative cysteine-rich re	no	no	0.743	0.757	0.309	3e-18
Q9LRJ9	252	Cysteine-rich repeat secr	no	no	0.778	0.892	0.284	5e-16
Q8GXV7	303	Cysteine-rich repeat secr	no	no	0.844	0.805	0.25	6e-16

>sp|Q9ZU94|CRR12_ARATH Cysteine-rich repeat secretory protein 12 OS=Arabidopsis thaliana GN=CRRSP12 PE=2 SV=2

 Score =  340 bits (873), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 171/285 (60%), Positives = 224/285 (78%), Gaps = 12/285 (4%)

Query: 14  LLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNF 73
           +L +  +S+L T SS++ +TF++GGCSQ+KY PGS YE++VNS+LTS V+SA   +YNNF
Sbjct: 7   VLFIAVVSLLGTFSSAAVDTFIYGGCSQEKYFPGSPYESNVNSLLTSFVSSASLYTYNNF 66

Query: 74  TIQG----QQTLYGLFQCRGDLSTA--DCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVK 127
           T  G      ++YGL+QCRGDLS+   DC RCVA AVS+LG+LC  + GG LQL+GCFVK
Sbjct: 67  TTNGISGDSSSVYGLYQCRGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVK 126

Query: 128 YDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTG 187
           YDN +FLGVEDKTVVV++CGP +GY+SD  TRRD+V+G L +S G    YRVG SG++ G
Sbjct: 127 YDNTTFLGVEDKTVVVRRCGPPVGYNSDEMTRRDSVVGSLAASSGG--SYRVGVSGELQG 184

Query: 188 VAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHG---GKD 244
           VAQC GDLSA+ECQDCL +AIGRL+TDCG A WGD++LAKCYARYS  G HS     G +
Sbjct: 185 VAQCTGDLSATECQDCLMEAIGRLRTDCGGAAWGDVYLAKCYARYSARGGHSRANGYGGN 244

Query: 245 NDDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGKGKGGK 289
            ++++D+EIEKTLAI++G+IAG+ LLV+FLS + + C+ +GKGGK
Sbjct: 245 RNNNDDDEIEKTLAIIVGLIAGVTLLVVFLSFMAKSCE-RGKGGK 288

Arabidopsis thaliana (taxid: 3702)

>sp|Q0WPN8|CRR60_ARATH Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1

 Score =  301 bits (771), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 165/281 (58%), Positives = 204/281 (72%), Gaps = 8/281 (2%)

Query: 8   SLILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMF 67
           +L +   L+  T   L++ ++S+T+TFVFGGCSQQK++P SAYE+++NS+LTSLVNSA +
Sbjct: 12  TLSIFFFLIAATAPSLSS-ATSATDTFVFGGCSQQKFSPASAYESNLNSLLTSLVNSATY 70

Query: 68  SSYNNFTIQGQQ---TLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGC 124
           SSYNNFTI G     T  GLFQCRGDLS  DC  CVA AVSQ+G LC  +CGG LQL GC
Sbjct: 71  SSYNNFTIMGSSSSDTARGLFQCRGDLSMPDCATCVARAVSQVGPLCPFTCGGALQLAGC 130

Query: 125 FVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGD 184
           ++KYDNISFLG EDKTVV+KKCG   GY++D  +RRDAVL  L +  G    +R GGSGD
Sbjct: 131 YIKYDNISFLGQEDKTVVLKKCGSSEGYNTDGISRRDAVLTELVNGGGY---FRAGGSGD 187

Query: 185 VTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHGGKD 244
           V G+ QCVGDL+ SECQDCL  AIGRLK DCG A +GDMFLAKCYARYS  G   H  K 
Sbjct: 188 VQGMGQCVGDLTVSECQDCLGTAIGRLKNDCGTAVFGDMFLAKCYARYSTDGAQ-HYAKS 246

Query: 245 NDDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGKG 285
           ++   +   EKT AI+IG++A + LL+IFL  +R +C   G
Sbjct: 247 HNYKTNYGGEKTFAIIIGLLAAVVLLIIFLLFLRGVCSRGG 287

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GUJ2|CRR2_ARATH Cysteine-rich repeat secretory protein 2 OS=Arabidopsis thaliana GN=CRRSP2 PE=2 SV=1

 Score =  250 bits (639), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 146/298 (48%), Positives = 198/298 (66%), Gaps = 26/298 (8%)

Query: 1   MASTQTPSLILLLLLLLTTLSILTTPSSSS-TETFVFGGCSQQKYTPGSAYENSVNSMLT 59
           M  T+T SL+  LL    T  IL  PSSSS T+ +++  CS  K++P S YE ++NS+L+
Sbjct: 1   MIKTKTTSLLCFLL----TAVILMNPSSSSPTDNYIYAVCSPAKFSPSSGYETNLNSLLS 56

Query: 60  SLVNSAMFSSYNNFTI-----QGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDS 114
           S V S   + Y NFT+     +   T+YG++QCRGDL    C  CV+ AV+Q+G LC +S
Sbjct: 57  SFVTSTAQTRYANFTVPTGKPEPTVTVYGIYQCRGDLDPTACSTCVSSAVAQVGALCSNS 116

Query: 115 CGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCG-PLIGYDSDASTRRDAVLGYLGSSDGS 173
             G LQ++ C ++YDN SFLGV+DKT+++ KCG P+   D DA T+   V+G LG+ DGS
Sbjct: 117 YSGFLQMENCLIRYDNKSFLGVQDKTLILNKCGQPMEFNDQDALTKASDVIGSLGTGDGS 176

Query: 174 YKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYS 233
           Y   R GG+G+V GVAQC GDLS S+CQDCLSDAIGRLK+DCG A+ G ++L+KCYAR+S
Sbjct: 177 Y---RTGGNGNVQGVAQCSGDLSTSQCQDCLSDAIGRLKSDCGMAQGGYVYLSKCYARFS 233

Query: 234 EGGDHS----------HGGKDNDDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLC 281
            GG H+           G K N DDN   + KTLAI+IG++  I LLV+FL+ + + C
Sbjct: 234 VGGSHARQTPGPNFGHEGEKGNKDDNG--VGKTLAIIIGIVTLIILLVVFLAFVGKCC 289

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NKQ9|CRR15_ARATH Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana GN=CRRSP15 PE=2 SV=1

 Score =  192 bits (487), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 103/256 (40%), Positives = 160/256 (62%), Gaps = 14/256 (5%)

Query: 31  TETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTI-------QGQQTLYG 83
           +  F++GGCS +KYTP + +E++ ++ L+S+V S+  +S+N+F +            ++G
Sbjct: 26  SHIFIYGGCSPEKYTPNTPFESNRDTFLSSVVTSSSDASFNSFAVGNDSSSSSSSSAVFG 85

Query: 84  LFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVV 143
           L+QCR DL ++DC +C+  +V Q+  +C  S G  LQL+GCF++Y+   FLG  D ++  
Sbjct: 86  LYQCRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTSLRY 145

Query: 144 KKCGPL-IGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQD 202
           KKC    +  D D   RRD VL  L S+   YK   V  SG V G AQCVGDLS S+C  
Sbjct: 146 KKCSSKSVENDYDFFKRRDDVLSDLESTQLGYK---VSRSGLVEGYAQCVGDLSPSDCTA 202

Query: 203 CLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHGGKDNDDDNDEEIEKTLAILIG 262
           CL++++G+LK  CG+A   +++LA+CYARY   G +      +D  N + + K++AI++G
Sbjct: 203 CLAESVGKLKNLCGSAVAAEVYLAQCYARYWGSGYYDFS---SDPTNGDHVGKSIAIIVG 259

Query: 263 MIAGIALLVIFLSSIR 278
           +IAG A+LV+ LS  R
Sbjct: 260 VIAGFAILVVLLSLCR 275

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NM73|CRR3_ARATH Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana GN=CRRSP3 PE=2 SV=1

 Score =  107 bits (266), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 139/295 (47%), Gaps = 18/295 (6%)

Query: 8   SLILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYT-PGSAYENSVNSMLTSLVNSAM 66
           S+I+++ LL   L+++   +++   T ++ GC++Q+++ P   Y  ++++M  SLV+ + 
Sbjct: 9   SIIMMMCLLFPDLNVVVKSATTEYTTLIYKGCARQQFSDPSGLYSQALSAMFGSLVSQST 68

Query: 67  FSS-YNNFTIQGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCF 125
            +  Y   T     T+ GLFQCRGDLS  DC  CV+        LC  +    +QL GC+
Sbjct: 69  KTRFYKTTTGTSTTTITGLFQCRGDLSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSGCY 128

Query: 126 VKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDV 185
           + Y+   F  +    ++ K CG      +    RRD   G + +   S   +       V
Sbjct: 129 LLYEVSGFSQISGMEMLFKTCGKNNIAGTGFEERRDTAFGVMQNGVVSGHGFYATTYESV 188

Query: 186 TGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGD-------- 237
             + QC GD+  ++C  C+ +A+ + + +CG++  G ++L KC+  YS   +        
Sbjct: 189 YVLGQCEGDVGDTDCSGCVKNALEKAQVECGSSISGQIYLHKCFIAYSYYPNGVPRRSSS 248

Query: 238 --------HSHGGKDNDDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGK 284
                    S     +   +     KT+AI++G  AG+  LVI L   + L   K
Sbjct: 249 SSSSSSSSSSGSSNSDPSTSTGATGKTVAIIVGGAAGVGFLVICLLFAKNLMRKK 303

Arabidopsis thaliana (taxid: 3702)

>sp|O22784|CRR11_ARATH Cysteine-rich repeat secretory protein 11 OS=Arabidopsis thaliana GN=CRRSP11 PE=2 SV=2

 Score =  107 bits (266), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 22/303 (7%)

Query: 1   MASTQTPSLILLLLLLLTTLSILTTPSSSSTE--TFVFGGCSQQKYT-PGSAYENSVNSM 57
           M       L+LL ++++   S L    SSS E    ++ GC++Q+ + P   Y  ++++M
Sbjct: 1   MGFYSLKQLLLLYIIIMALFSDLKLAKSSSPEYTNLIYKGCARQRLSDPSGLYSQALSAM 60

Query: 58  LTSLVNSAMFSSYNNFTIQGQQTLY--GLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSC 115
              LV  +  + +   T          GLFQCRGDLS  DC  CV+      G LC  + 
Sbjct: 61  YGLLVTQSTKTRFYKTTTGTTSQTSVTGLFQCRGDLSNNDCYNCVSRLPVLSGKLCGKTI 120

Query: 116 GGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYK 175
              +QL GC++ Y+   F  +    ++ K CG      +    RRD   G + +      
Sbjct: 121 AARVQLSGCYLLYEISGFAQISGMELLFKTCGKNNVAGTGFEQRRDTAFGVMQNGVVQGH 180

Query: 176 PYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEG 235
            +       V  + QC GD+  S+C  C+ +A+ R + +CG++  G ++L KC+  YS  
Sbjct: 181 GFYATTYESVYVLGQCEGDIGDSDCSGCIKNALQRAQVECGSSISGQIYLHKCFVGYSF- 239

Query: 236 GDHSHGGKDNDDDNDEEIE--------------KTLAILIGMIAGIALLVIFLSSIRRLC 281
             + +G                           KT+AI++G  AG+  LVI L  ++ L 
Sbjct: 240 --YPNGVPKRSSPYPSSGSSGSSSSSSSSGTTGKTVAIIVGGTAGVGFLVICLLFVKNLM 297

Query: 282 DGK 284
             K
Sbjct: 298 KKK 300

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Q0E2|CRR9_ARATH Cysteine-rich repeat secretory protein 9 OS=Arabidopsis thaliana GN=CRRSP9 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 18/214 (8%)

Query: 35  VFGGCSQ-QKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQG--QQTLYGLFQCRGDL 91
           +F  C+    +T  S+YE + +++L SL  S+    Y+N T +G    T++G+F CRGD+
Sbjct: 32  IFTVCNPTNNFTQTSSYETNRDTLLASLRESSSLGHYSNAT-EGLSPDTVHGMFLCRGDI 90

Query: 92  STADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLG----VEDKTVVVKKCG 147
           +TA C  CV  A +++ + C  +   V+  D C V+Y N+SF      V   T+   +  
Sbjct: 91  TTASCVDCVQTATTEIASNCTLNKRAVIYYDECMVRYSNVSFSSELEIVPSITIYSLRSA 150

Query: 148 PLIGYDSDASTRRDAVLGYLGSSDGSYKPYRV---------GGSGDVTGVAQCVGDLSAS 198
           P     +   T + + L +   S  S  PY V          GS D+  + QC  DL   
Sbjct: 151 PNPTRFNQTLTEKFSELIF-NVSSSSLVPYFVEDQERVTQSEGSYDLDTMVQCSPDLDIF 209

Query: 199 ECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARY 232
            C  CL  A  R+ T CG   +  +F  KC  R+
Sbjct: 210 NCTVCLRVAFFRISTCCGLPSYAKIFTPKCLLRF 243

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SH41|CRR7_ARATH Putative cysteine-rich repeat secretory protein 7 OS=Arabidopsis thaliana GN=CRRSP7 PE=3 SV=2

 Score = 92.4 bits (228), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 104/236 (44%), Gaps = 21/236 (8%)

Query: 12  LLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYN 71
           L     + LS  T        TF    CS   +T  S+YE + N +LT+L  ++    Y 
Sbjct: 10  LFYFFFSLLSHQTMSQPQHMHTF----CSVDSFTQTSSYETNRNILLTTLSLTSSLVHYL 65

Query: 72  NFTI-QGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDN 130
           N TI     T+YG+F CRGD++T  C  CV  A  ++ T C  +    +  D C V+Y N
Sbjct: 66  NATIGLSPDTVYGMFLCRGDINTTSCSDCVQTAAIEIATNCTLNKRAFIYYDECMVRYSN 125

Query: 131 ISFLG-VEDKTVVVK---KCGPLIG-YDSDASTRRDAVLGYLGSSDGSYKPYRV------ 179
           +SF    E K V+V+   +  P    ++   S + D ++     S  +  PY V      
Sbjct: 126 VSFFSEFESKPVIVRYSLRSAPNSNRFNQTLSNKLDQLIP--NVSPSTLIPYFVEDQERV 183

Query: 180 ---GGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARY 232
               GS D+  + QC  DL  S C  CL  A   + T CG      +F  KC  RY
Sbjct: 184 TQLEGSYDLVSMIQCSPDLDPSNCTICLRFAYATVSTCCGVPSSALIFTPKCILRY 239

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRJ9|CRR38_ARATH Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 25/250 (10%)

Query: 1   MASTQTPSLILLLLLLLTTLSILTTPSSSSTETFVFGGCS--QQKYTPGSAYENSVNSML 58
           M+S +      +L + +  LSI T  S S    F+F  CS  +  +T  S YE+++N++ 
Sbjct: 1   MSSLKRIVWFPILAIAIQILSIHTVLSQSQNNAFLFHKCSDIEGSFTSKSLYESNLNNLF 60

Query: 59  TSL---VNSAMFSSYNNFTIQGQQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSC 115
           + L   V S  F++ +  T      + GL  CRGD S++DC  C+  A+ +L   C ++ 
Sbjct: 61  SQLSYKVPSTGFAASS--TGNTPNNVNGLALCRGDASSSDCRSCLETAIPELRQRCPNNK 118

Query: 116 GGVLQLDGCFVKYDNISFLG---VEDKTVVVKKCGPLIGYDSDAST---RRDAVLGYL-- 167
            G++  D C VKY + +F G    E++  +       +   SD ST   +  A+L  L  
Sbjct: 119 AGIVWYDNCLVKYSSTNFFGKIDFENRFYLYN-----VKNVSDPSTFNSQTKALLTELTK 173

Query: 168 -GSSDGSYKPYRVG----GSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGD 222
             ++  + K +  G    G   + G+ QC  DL +  C+ CL+  IG L   C   + G 
Sbjct: 174 KATTRDNQKLFATGEKNIGKNKLYGLVQCTRDLKSITCKACLNGIIGELPNCCDGKEGGR 233

Query: 223 MFLAKCYARY 232
           +    C  RY
Sbjct: 234 VVGGSCNFRY 243

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GXV7|CRR56_ARATH Cysteine-rich repeat secretory protein 56 OS=Arabidopsis thaliana GN=CRRSP56 PE=1 SV=2

 Score = 85.1 bits (209), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 24/268 (8%)

Query: 32  ETFVFGGCSQQKYT-PGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQT--LYGLFQCR 88
           +  +F GC+ QK   P   +  ++ ++ TSLV+ +  SS+ + T     T  + G+FQCR
Sbjct: 26  KNLIFKGCANQKSPDPTGVFSQNLKNLFTSLVSQSSQSSFASVTSGTDNTTAVIGVFQCR 85

Query: 89  GDLSTADCGRCVAHAVSQLGTLCL------DSCGGVLQLDGCFVKYDNISFLGVEDKTVV 142
           GDL  A C  CV+     +  LC       +     + L GC+++Y++  F       ++
Sbjct: 86  GDLQNAQCYDCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCYIRYESSGFRQTSGTEML 145

Query: 143 VKKCGPLIGYDSDASTRRDAVLGYLGS--------SDGSYKPYRVGGSGDVTGVAQCVGD 194
            + CG     D     +R+   G   +          G    +  G    V  + QC G 
Sbjct: 146 FRVCGKKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLGQCEGS 205

Query: 195 LSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHGGKDNDD----DND 250
           L  S+C +C+ D   + K++CG +  G ++L KC+  YS    +SHG  + +     +  
Sbjct: 206 LGNSDCGECVKDGFEKAKSECGESNSGQVYLQKCFVSYSY---YSHGVPNIEPLSGGEKR 262

Query: 251 EEIEKTLAILIGMIAGIALLVIFLSSIR 278
           +  E+T+A+ +G +  +  +++ L  +R
Sbjct: 263 QHTERTIALAVGGVFVLGFVIVCLLVLR 290

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
255570037	290	DUF26 domain-containing protein 1 precur	0.989	0.986	0.750	1e-121
118487640	302	unknown [Populus trichocarpa]	0.937	0.897	0.710	1e-109
224111452	287	predicted protein [Populus trichocarpa]	0.948	0.954	0.689	1e-109
356524218	287	PREDICTED: cysteine-rich repeat secretor	0.982	0.989	0.630	1e-101
356513092	287	PREDICTED: cysteine-rich repeat secretor	0.927	0.933	0.667	2e-99
297737643	321	unnamed protein product [Vitis vinifera]	0.923	0.831	0.645	5e-96
225424351	298	PREDICTED: cysteine-rich repeat secretor	0.923	0.895	0.645	7e-96
224079505	312	predicted protein [Populus trichocarpa]	0.958	0.887	0.629	3e-95
297817772	287	hypothetical protein ARALYDRAFT_484082 [	0.941	0.947	0.609	2e-94
118482748	272	unknown [Populus trichocarpa]	0.816	0.867	0.711	2e-94

>gi|255570037|ref|XP_002525981.1| DUF26 domain-containing protein 1 precursor, putative [Ricinus communis] gi|223534713|gb|EEF36405.1| DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/293 (75%), Positives = 249/293 (84%), Gaps = 7/293 (2%)

Query: 1   MASTQTPSLILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTS 60
           M+ T + +   L  LLLT LS LTTP+SSS ++F+FGGCSQ KYT GS YE++VNS+LTS
Sbjct: 1   MSVTISTTAASLSFLLLTILSFLTTPASSSLQSFIFGGCSQLKYTSGSPYESNVNSLLTS 60

Query: 61  LVNSAMFSSYNNFTIQG----QQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCG 116
           LVNSA  ++YNNFTIQ     Q TLYGLFQCRGDLS  DC RCVA AVSQLGTLCLDSCG
Sbjct: 61  LVNSATLTNYNNFTIQSPSSSQDTLYGLFQCRGDLSNGDCARCVAAAVSQLGTLCLDSCG 120

Query: 117 GVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKP 176
           G LQLDGCFVKYDN+SFLGVEDKTVV+KKCGP IGYDS+A TRRDA+LGYLG+SDGSYKP
Sbjct: 121 GALQLDGCFVKYDNMSFLGVEDKTVVLKKCGPSIGYDSNALTRRDAILGYLGASDGSYKP 180

Query: 177 YRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGG 236
           YRV GSGDV GVAQCV DLSASECQDCLSDA+ RLKTDCG A  GDM+LAKCY R+SE G
Sbjct: 181 YRVAGSGDVYGVAQCVQDLSASECQDCLSDAVERLKTDCGPAASGDMYLAKCYVRFSERG 240

Query: 237 DHSHGGKDNDDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGKGKGGK 289
            HSHGG  NDD ND+EIEKTLAILIG+IAG+ALL++FLS +R++C+ KGKGGK
Sbjct: 241 AHSHGG--NDDHNDDEIEKTLAILIGLIAGVALLIVFLSFLRKVCE-KGKGGK 290

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487640|gb|ABK95645.1| unknown [Populus trichocarpa]

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/276 (71%), Positives = 232/276 (84%), Gaps = 5/276 (1%)

Query: 14  LLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNF 73
           L+ L T+++LTTP+ SS +TFV+GGCSQ KYTPGS YE++VNS+LTSLVNSA F+ YNNF
Sbjct: 10  LISLLTIALLTTPAISSVDTFVYGGCSQVKYTPGSPYESNVNSLLTSLVNSATFTIYNNF 69

Query: 74  TIQG---QQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDN 130
           TI+    Q TLYGLFQCRGDLS  DC  CVA AVSQLGTLCLDS GG LQLDGCFVKYDN
Sbjct: 70  TIKSPTSQDTLYGLFQCRGDLSNGDCASCVARAVSQLGTLCLDSTGGALQLDGCFVKYDN 129

Query: 131 ISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQ 190
            +FLGVEDKT V+KKCGPLI YDSD   RRDAV+ YLG+SDGS KP+R+GGSGD++ VAQ
Sbjct: 130 TTFLGVEDKTEVLKKCGPLIAYDSDELNRRDAVMDYLGTSDGSSKPFRIGGSGDISAVAQ 189

Query: 191 CVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHGGKDNDDDND 250
           CV DLSASECQDCLS+ +GRLKT CGAA  GDM+LAKCY R+S+ G HSHGG  + D+ND
Sbjct: 190 CVQDLSASECQDCLSEVVGRLKTYCGAAASGDMYLAKCYVRFSKAGAHSHGGNVDHDEND 249

Query: 251 EEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGKGK 286
            E+EKTLAIL+G+IAG+ALL++FL+ +R+ C GKGK
Sbjct: 250 -EVEKTLAILVGLIAGVALLIVFLAFLRKAC-GKGK 283

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111452|ref|XP_002315861.1| predicted protein [Populus trichocarpa] gi|222864901|gb|EEF02032.1| predicted protein [Populus trichocarpa]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/277 (68%), Positives = 234/277 (84%), Gaps = 3/277 (1%)

Query: 9   LILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFS 68
           L++  L+ L T+++LT P++SST++FVFGGCSQ KYTPGS YE++VN +LTSLV+SA F+
Sbjct: 5   LMITTLISLLTITVLTAPATSSTDSFVFGGCSQLKYTPGSPYESNVNLLLTSLVSSAAFT 64

Query: 69  SYNNFTIQG---QQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCF 125
           +YNNFTI+    Q TLYGLFQCRGDLS  DC  CVA AVSQLGTLCLDS GG LQL+GCF
Sbjct: 65  TYNNFTIKSPTPQDTLYGLFQCRGDLSNGDCASCVARAVSQLGTLCLDSSGGALQLEGCF 124

Query: 126 VKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDV 185
           VKYDN +FLGVEDKT V+ KCGPLIGYDSD   RRDAVLGYLG+SDGSY+P+RVGGSGDV
Sbjct: 125 VKYDNTTFLGVEDKTEVLHKCGPLIGYDSDELNRRDAVLGYLGTSDGSYRPFRVGGSGDV 184

Query: 186 TGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHGGKDN 245
           + VAQCV DLSASECQDCLS+AIGRLKT CG A WGD++LAKC+ R+S+ G  S+GG  +
Sbjct: 185 SSVAQCVQDLSASECQDCLSEAIGRLKTVCGPAVWGDLYLAKCFVRFSKAGASSNGGNGH 244

Query: 246 DDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCD 282
           D+  ++E+EKTLAILIG+IA +ALL++FLS  R++C+
Sbjct: 245 DNSGNDEVEKTLAILIGLIAAVALLIVFLSFFRKVCE 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524218|ref|XP_003530728.1| PREDICTED: cysteine-rich repeat secretory protein 12-like [Glycine max]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 181/287 (63%), Positives = 226/287 (78%), Gaps = 3/287 (1%)

Query: 5   QTPSLILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNS 64
           +  +++L+LL L+   S +TTPS+S+ +TF+FGGCSQ K+TPGSAYEN+VNS+LTSLVNS
Sbjct: 2   RNANMVLVLLFLMAIFSAMTTPSTSAIDTFIFGGCSQAKFTPGSAYENTVNSLLTSLVNS 61

Query: 65  AMFSSYNNFTIQGQQ-TLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDG 123
           A F++YNNFT+     T+YGLFQCRGDL    C RCV+ AV+QLGTLC  SCGG LQLDG
Sbjct: 62  AAFANYNNFTVPASSDTVYGLFQCRGDLPNDQCSRCVSRAVTQLGTLCFASCGGALQLDG 121

Query: 124 CFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSG 183
           CFVKYDN +F+GVEDKT+V KKCGP +G  SDA +RR+AVL YL +SDG YK +R  G G
Sbjct: 122 CFVKYDNTTFIGVEDKTLVSKKCGPSVGLTSDALSRREAVLAYLQTSDGVYKTFRTSGYG 181

Query: 184 DVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHG-G 242
           D  GVAQC GDLS S+CQDCLSD+I R KTDCG   W +++LAKCYARYSE G  S    
Sbjct: 182 DFQGVAQCTGDLSPSQCQDCLSDSIQRFKTDCGPTTWAEIYLAKCYARYSEAGTRSRANN 241

Query: 243 KDNDDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGKGKGGK 289
            D+ + ND+EIEKTLAILIG+IAG+AL+++FLS + ++C+ K KGGK
Sbjct: 242 NDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCE-KHKGGK 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513092|ref|XP_003525248.1| PREDICTED: cysteine-rich repeat secretory protein 12-like [Glycine max]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 181/271 (66%), Positives = 218/271 (80%), Gaps = 3/271 (1%)

Query: 21  SILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQ- 79
           S +TTPS+S+ +TF+F GCSQ K+TPGSAYEN+VNS+LTSLVNSA F++YNNFT+     
Sbjct: 18  SAMTTPSTSAIDTFIFAGCSQPKFTPGSAYENTVNSLLTSLVNSAAFANYNNFTVPASSD 77

Query: 80  TLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDK 139
            +YGLFQCRGDL+   C RCV+ AV+QLGTLC  SCGG LQ+DGCFVKYDN +F+GVEDK
Sbjct: 78  AVYGLFQCRGDLTNDQCSRCVSRAVTQLGTLCFASCGGALQVDGCFVKYDNATFIGVEDK 137

Query: 140 TVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASE 199
           T+V KKCGP +G  SDA TRRDAVL YL +SDG YK +R  G GD  GVAQC GDLS SE
Sbjct: 138 TLVTKKCGPSVGLTSDALTRRDAVLAYLQTSDGVYKTFRTSGYGDFQGVAQCTGDLSPSE 197

Query: 200 CQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHG-GKDNDDDNDEEIEKTLA 258
           CQDCLSDAI RLKT+CG   W D++LAKCYARYSEGG  S G   D+ + ND+EIEKTLA
Sbjct: 198 CQDCLSDAIQRLKTECGPTNWADIYLAKCYARYSEGGTRSRGNNNDDSNHNDDEIEKTLA 257

Query: 259 ILIGMIAGIALLVIFLSSIRRLCDGKGKGGK 289
           ILIG+IAG+AL+++FLS + ++C+ K KGGK
Sbjct: 258 ILIGLIAGVALIIVFLSFLSKVCE-KHKGGK 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737643|emb|CBI26844.3| unnamed protein product [Vitis vinifera]

 Score =  356 bits (914), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 184/285 (64%), Positives = 226/285 (79%), Gaps = 18/285 (6%)

Query: 15  LLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSA----MFSSY 70
           + L T S L +PS S+ +TF+FGGC+Q +Y  GS YE++VNS+LTSLVNSA    + + Y
Sbjct: 37  IFLITFSALPSPSISAIDTFIFGGCAQIRYVQGSPYESNVNSILTSLVNSASAPGIAALY 96

Query: 71  NNFTIQG---QQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVK 127
           N +T+ G   Q T+ GL+QCRGDL+  DC RCVA  VSQLG LCLDSCGG LQL+GCFVK
Sbjct: 97  NKYTVPGPTSQDTVSGLYQCRGDLNPGDCARCVARCVSQLGALCLDSCGGALQLEGCFVK 156

Query: 128 YDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTG 187
           YDN +FLGVEDKTVVVKKCGP IGYDSDA TRRDAVLGYL   +G  + +RVGGSG++ G
Sbjct: 157 YDNATFLGVEDKTVVVKKCGPSIGYDSDALTRRDAVLGYL---EGGTQTFRVGGSGNIQG 213

Query: 188 VAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHGGKDN-- 245
           +AQCVGDLSASECQDC+SDAIGRL+++CG + WGDMFLAKCYAR+ EGGD SH   D   
Sbjct: 214 MAQCVGDLSASECQDCVSDAIGRLRSECGTSAWGDMFLAKCYARFWEGGDRSHTANDGYG 273

Query: 246 ------DDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGK 284
                 D+DNDE+IEKTLAILIG+IAG+AL+++FLS +R++ +GK
Sbjct: 274 YDHHDHDNDNDEDIEKTLAILIGLIAGVALIIVFLSFLRKVLEGK 318

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424351|ref|XP_002284879.1| PREDICTED: cysteine-rich repeat secretory protein 12-like [Vitis vinifera]

 Score =  356 bits (913), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 184/285 (64%), Positives = 226/285 (79%), Gaps = 18/285 (6%)

Query: 15  LLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSA----MFSSY 70
           + L T S L +PS S+ +TF+FGGC+Q +Y  GS YE++VNS+LTSLVNSA    + + Y
Sbjct: 14  IFLITFSALPSPSISAIDTFIFGGCAQIRYVQGSPYESNVNSILTSLVNSASAPGIAALY 73

Query: 71  NNFTIQG---QQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVK 127
           N +T+ G   Q T+ GL+QCRGDL+  DC RCVA  VSQLG LCLDSCGG LQL+GCFVK
Sbjct: 74  NKYTVPGPTSQDTVSGLYQCRGDLNPGDCARCVARCVSQLGALCLDSCGGALQLEGCFVK 133

Query: 128 YDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTG 187
           YDN +FLGVEDKTVVVKKCGP IGYDSDA TRRDAVLGYL   +G  + +RVGGSG++ G
Sbjct: 134 YDNATFLGVEDKTVVVKKCGPSIGYDSDALTRRDAVLGYL---EGGTQTFRVGGSGNIQG 190

Query: 188 VAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHGGKDN-- 245
           +AQCVGDLSASECQDC+SDAIGRL+++CG + WGDMFLAKCYAR+ EGGD SH   D   
Sbjct: 191 MAQCVGDLSASECQDCVSDAIGRLRSECGTSAWGDMFLAKCYARFWEGGDRSHTANDGYG 250

Query: 246 ------DDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGK 284
                 D+DNDE+IEKTLAILIG+IAG+AL+++FLS +R++ +GK
Sbjct: 251 YDHHDHDNDNDEDIEKTLAILIGLIAGVALIIVFLSFLRKVLEGK 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079505|ref|XP_002305881.1| predicted protein [Populus trichocarpa] gi|222848845|gb|EEE86392.1| predicted protein [Populus trichocarpa]

 Score =  354 bits (908), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 182/289 (62%), Positives = 219/289 (75%), Gaps = 12/289 (4%)

Query: 6   TPSLILLLLLLLTTLSILTTPS-SSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNS 64
           T S +LL    + +LS LT PS S+ST+ FVFGGC+QQKY   S +E+++NS+LTSLVNS
Sbjct: 5   TSSSLLLTFTFIVSLSSLTCPSLSASTDAFVFGGCTQQKYVQDSPFESNLNSLLTSLVNS 64

Query: 65  AMFSSYNNFTIQG---QQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQL 121
           A +SSYNN+TI G   Q  +YGL+QCRGDLS  DC  CVA AVSQLG LC  +CGG LQL
Sbjct: 65  ATYSSYNNYTIMGSSPQDVVYGLYQCRGDLSMPDCATCVARAVSQLGVLCAQTCGGALQL 124

Query: 122 DGCFVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGG 181
            GC+VKYDN +FLGVEDKTVV+KKCGP +GYD+DA   RDAVLG L  + G+   YRVGG
Sbjct: 125 QGCYVKYDNTTFLGVEDKTVVLKKCGPSVGYDTDAMNLRDAVLGGLARTGGA---YRVGG 181

Query: 182 SGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDH--- 238
           SGDV GVAQC+GDLS  ECQDCLS+AI RLK+DCG A +GDMFLAKCYARY+ GG H   
Sbjct: 182 SGDVQGVAQCIGDLSTGECQDCLSEAIMRLKSDCGTADYGDMFLAKCYARYTTGGPHVYT 241

Query: 239 -SHGGKDNDDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGKGK 286
            SH GK  D    +  EKT AI+IG++AG+ALL+IFLS +R++  G GK
Sbjct: 242 KSHSGKHTDKSTSDG-EKTFAIIIGLLAGVALLIIFLSFLRKVFGGNGK 289

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817772|ref|XP_002876769.1| hypothetical protein ARALYDRAFT_484082 [Arabidopsis lyrata subsp. lyrata] gi|297322607|gb|EFH53028.1| hypothetical protein ARALYDRAFT_484082 [Arabidopsis lyrata subsp. lyrata]

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 175/287 (60%), Positives = 226/287 (78%), Gaps = 15/287 (5%)

Query: 13  LLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNN 72
           L+L +  +S+L T SS++ +TF++GGCSQ KY PGS YE++VNS+LTS V+SA   +YNN
Sbjct: 6   LVLFIAVVSLLGTFSSAAVDTFIYGGCSQAKYFPGSPYESNVNSLLTSFVSSASLYTYNN 65

Query: 73  FTIQGQQ----TLYGLFQCRGDLSTA--DCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFV 126
           FT+ G      ++YGL+QCRGDLS+   DC RCVA AVS+LG+LC  +CGG LQL+GCFV
Sbjct: 66  FTVNGISGDISSVYGLYQCRGDLSSGSGDCARCVARAVSRLGSLCAMACGGALQLEGCFV 125

Query: 127 KYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVT 186
           KYDN +FLGVEDKTVVV++CGP +GY+SD   RRD+V+GYL +S G    YRVG SG++ 
Sbjct: 126 KYDNTTFLGVEDKTVVVRRCGPPVGYNSDELNRRDSVVGYLAASSGG--SYRVGVSGNLQ 183

Query: 187 GVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHS----HGG 242
           GVAQC GDLSA+ECQDCL +AIGRL++DCG A WGD++LAKCYARYS  G HS    +GG
Sbjct: 184 GVAQCTGDLSATECQDCLMEAIGRLRSDCGGAAWGDVYLAKCYARYSARGGHSRANGYGG 243

Query: 243 KDNDDDNDEEIEKTLAILIGMIAGIALLVIFLSSIRRLCDGKGKGGK 289
             N+D  D+EIEKTLAI++G+IAG+ LLV+FLS + + C+ +GKGGK
Sbjct: 244 SRNND--DDEIEKTLAIIVGLIAGVTLLVVFLSFMAKSCE-RGKGGK 287

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482748|gb|ABK93292.1| unknown [Populus trichocarpa]

 Score =  351 bits (900), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 170/239 (71%), Positives = 198/239 (82%), Gaps = 3/239 (1%)

Query: 8   SLILLLLLLLTTLSILTTPSSSSTETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMF 67
           ++ +  L+ L T+++LTTP+ SS +TFV+GGCSQ KYTPGS YE++VNS+LTSLVNSA F
Sbjct: 4   TITMAPLISLLTIALLTTPAISSVDTFVYGGCSQVKYTPGSPYESNVNSLLTSLVNSATF 63

Query: 68  SSYNNFTIQG---QQTLYGLFQCRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGC 124
           + YNNFTI+    Q TLYGLFQCRGDLS  DC  CVA AVSQLGTLCLDS GG LQLDGC
Sbjct: 64  TIYNNFTIKSPTSQDTLYGLFQCRGDLSNGDCASCVARAVSQLGTLCLDSTGGALQLDGC 123

Query: 125 FVKYDNISFLGVEDKTVVVKKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGD 184
           FVKYDN +FLGVEDKT V+KKCGPLI YDSD   RRDAV+ YLG+SDGS KP+R+GGSGD
Sbjct: 124 FVKYDNTTFLGVEDKTEVLKKCGPLIAYDSDELNRRDAVMDYLGTSDGSSKPFRIGGSGD 183

Query: 185 VTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYSEGGDHSHGGK 243
           ++ VAQCV DLSASECQDCLS+ +GRLKT CGAA  GDM+LAKCY R+S+ G HSHGG 
Sbjct: 184 ISAVAQCVQDLSASECQDCLSEVVGRLKTYCGAAASGDMYLAKCYVRFSKAGAHSHGGN 242

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
TAIR|locus:2065450	288	PDLP6 "AT2G01660" [Arabidopsis	0.882	0.885	0.565	7.1e-77
TAIR|locus:2151709	298	PDLP7 "plasmodesmata-located p	0.865	0.838	0.583	3.6e-73
TAIR|locus:2033614	299	HWI1 "HOPW1-1-INDUCED GENE1" [	0.688	0.665	0.519	6.8e-56
TAIR|locus:2101811	279	PDLP8 "AT3G60720" [Arabidopsis	0.678	0.702	0.420	2.8e-41
TAIR|locus:2018314	307	PDLP2 "AT1G04520" [Arabidopsis	0.695	0.654	0.295	5.3e-24
TAIR|locus:2051089	304	PDLP3 "AT2G33330" [Arabidopsis	0.688	0.654	0.287	3.8e-23
TAIR|locus:2031311	284	AT1G63570 "AT1G63570" [Arabido	0.671	0.683	0.309	1.5e-21
TAIR|locus:2172492	303	PDLP1 "plasmodesmata-located p	0.678	0.646	0.289	9.2e-20
TAIR|locus:2031341	324	AT1G63550 [Arabidopsis thalian	0.678	0.604	0.313	1.5e-19
TAIR|locus:2095662	252	AT3G22060 "AT3G22060" [Arabido	0.678	0.777	0.276	2.9e-16

TAIR|locus:2065450 PDLP6 "AT2G01660" [Arabidopsis thaliana (taxid:3702)]

 Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
 Identities = 151/267 (56%), Positives = 189/267 (70%)

Query:    32 ETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQG----QQTLYGLFQC 87
             +TF++GGCSQ+KY PGS YE++VNS+LTS V+SA   +YNNFT  G      ++YGL+QC
Sbjct:    25 DTFIYGGCSQEKYFPGSPYESNVNSLLTSFVSSASLYTYNNFTTNGISGDSSSVYGLYQC 84

Query:    88 RGDLSTA--DCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKK 145
             RGDLS+   DC RCVA AVS+LG+LC  + GG LQL+GCFVKYDN +FLGVEDKTVVV++
Sbjct:    85 RGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGVEDKTVVVRR 144

Query:   146 CGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLS 205
             CGP +GY+SD  TRRD+V+G L +S G    YRVG SG++ GVAQC GDLSA+ECQDCL 
Sbjct:   145 CGPPVGYNSDEMTRRDSVVGSLAASSGG--SYRVGVSGELQGVAQCTGDLSATECQDCLM 202

Query:   206 DAIGRLKTDCGAAKWGDMFLAKCYARYSEXXXXXXXXXXXXXXXX---EEIEKTXXXXXX 262
             +AIGRL+TDCG A WGD++LAKCYARYS                    +EIEKT      
Sbjct:   203 EAIGRLRTDCGGAAWGDVYLAKCYARYSARGGHSRANGYGGNRNNNDDDEIEKTLAIIVG 262

Query:   263 XXXXXXXXVIFLSSIRRLCDGKGKGGK 289
                     V+FLS + + C+ +GKGGK
Sbjct:   263 LIAGVTLLVVFLSFMAKSCE-RGKGGK 288

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2151709 PDLP7 "plasmodesmata-located protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 150/257 (58%), Positives = 174/257 (67%)

Query:    32 ETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQ---TLYGLFQCR 88
             +TFVFGGCSQQK++P SAYE+++NS+LTSLVNSA +SSYNNFTI G     T  GLFQCR
Sbjct:    35 DTFVFGGCSQQKFSPASAYESNLNSLLTSLVNSATYSSYNNFTIMGSSSSDTARGLFQCR 94

Query:    89 GDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGP 148
             GDLS  DC  CVA AVSQ+G LC  +CGG LQL GC++KYDNISFLG EDKTVV+KKCG 
Sbjct:    95 GDLSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDNISFLGQEDKTVVLKKCGS 154

Query:   149 LIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAI 208
               GY++D  +RRDAVL  L +  G Y  +R GGSGDV G+ QCVGDL+ SECQDCL  AI
Sbjct:   155 SEGYNTDGISRRDAVLTELVNG-GGY--FRAGGSGDVQGMGQCVGDLTVSECQDCLGTAI 211

Query:   209 GRLKTDCGAAKWGDMFLAKCYARYSEXXXXXXXXXXXXXXXXEEIEKTXXXXXXXXXXXX 268
             GRLK DCG A +GDMFLAKCYARYS                    EKT            
Sbjct:   212 GRLKNDCGTAVFGDMFLAKCYARYSTDGAQHYAKSHNYKTNYGG-EKTFAIIIGLLAAVV 270

Query:   269 XXVIFLSSIRRLCDGKG 285
               +IFL  +R +C   G
Sbjct:   271 LLIIFLLFLRGVCSRGG 287

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2033614 HWI1 "HOPW1-1-INDUCED GENE1" [Arabidopsis thaliana (taxid:3702)]

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 108/208 (51%), Positives = 149/208 (71%)

Query:    32 ETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQ-GQQ----TLYGLFQ 86
             + +++  CS  K++P S YE ++NS+L+S V S   + Y NFT+  G+     T+YG++Q
Sbjct:    29 DNYIYAVCSPAKFSPSSGYETNLNSLLSSFVTSTAQTRYANFTVPTGKPEPTVTVYGIYQ 88

Query:    87 CRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKC 146
             CRGDL    C  CV+ AV+Q+G LC +S  G LQ++ C ++YDN SFLGV+DKT+++ KC
Sbjct:    89 CRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKTLILNKC 148

Query:   147 G-PLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLS 205
             G P+   D DA T+   V+G LG+ DGSY   R GG+G+V GVAQC GDLS S+CQDCLS
Sbjct:   149 GQPMEFNDQDALTKASDVIGSLGTGDGSY---RTGGNGNVQGVAQCSGDLSTSQCQDCLS 205

Query:   206 DAIGRLKTDCGAAKWGDMFLAKCYARYS 233
             DAIGRLK+DCG A+ G ++L+KCYAR+S
Sbjct:   206 DAIGRLKSDCGMAQGGYVYLSKCYARFS 233

GO:0005576 "extracellular region" evidence=ISM

GO:0051707 "response to other organism" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0006914 "autophagy" evidence=RCA

TAIR|locus:2101811 PDLP8 "AT3G60720" [Arabidopsis thaliana (taxid:3702)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 87/207 (42%), Positives = 132/207 (63%)

Query:    34 FVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTI-------QGQQTLYGLFQ 86
             F++GGCS +KYTP + +E++ ++ L+S+V S+  +S+N+F +            ++GL+Q
Sbjct:    29 FIYGGCSPEKYTPNTPFESNRDTFLSSVVTSSSDASFNSFAVGNDSSSSSSSSAVFGLYQ 88

Query:    87 CRGDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKC 146
             CR DL ++DC +C+  +V Q+  +C  S G  LQL+GCF++Y+   FLG  D ++  KKC
Sbjct:    89 CRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTSLRYKKC 148

Query:   147 GPL-IGYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLS 205
                 +  D D   RRD VL  L S+   YK   V  SG V G AQCVGDLS S+C  CL+
Sbjct:   149 SSKSVENDYDFFKRRDDVLSDLESTQLGYK---VSRSGLVEGYAQCVGDLSPSDCTACLA 205

Query:   206 DAIGRLKTDCGAAKWGDMFLAKCYARY 232
             +++G+LK  CG+A   +++LA+CYARY
Sbjct:   206 ESVGKLKNLCGSAVAAEVYLAQCYARY 232

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2018314 PDLP2 "AT1G04520" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 60/203 (29%), Positives = 101/203 (49%)

Query:    33 TFVFGGCSQQKYT-PGSAYENSVNSMLTSLVN-SAMFSSYNNFTIQGQQTLYGLFQCRGD 90
             T ++ GC++Q+++ P   Y  ++++M  SLV+ S     Y   T     T+ GLFQCRGD
Sbjct:    34 TLIYKGCARQQFSDPSGLYSQALSAMFGSLVSQSTKTRFYKTTTGTSTTTITGLFQCRGD 93

Query:    91 LSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLI 150
             LS  DC  CV+        LC  +    +QL GC++ Y+   F  +    ++ K CG   
Sbjct:    94 LSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSGCYLLYEVSGFSQISGMEMLFKTCGKNN 153

Query:   151 GYDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGR 210
                +    RRD   G + +   S   +       V  + QC GD+  ++C  C+ +A+ +
Sbjct:   154 IAGTGFEERRDTAFGVMQNGVVSGHGFYATTYESVYVLGQCEGDVGDTDCSGCVKNALEK 213

Query:   211 LKTDCGAAKWGDMFLAKCYARYS 233
              + +CG++  G ++L KC+  YS
Sbjct:   214 AQVECGSSISGQIYLHKCFIAYS 236

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2051089 PDLP3 "AT2G33330" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 58/202 (28%), Positives = 99/202 (49%)

Query:    35 VFGGCSQQKYT-PGSAYENSVNSMLTSLVNSAMFSSYNNFTI--QGQQTLYGLFQCRGDL 91
             ++ GC++Q+ + P   Y  ++++M   LV  +  + +   T     Q ++ GLFQCRGDL
Sbjct:    37 IYKGCARQRLSDPSGLYSQALSAMYGLLVTQSTKTRFYKTTTGTTSQTSVTGLFQCRGDL 96

Query:    92 STADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLGVEDKTVVVKKCGPLIG 151
             S  DC  CV+      G LC  +    +QL GC++ Y+   F  +    ++ K CG    
Sbjct:    97 SNNDCYNCVSRLPVLSGKLCGKTIAARVQLSGCYLLYEISGFAQISGMELLFKTCGKNNV 156

Query:   152 YDSDASTRRDAVLGYLGSSDGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLSDAIGRL 211
               +    RRD   G + +       +       V  + QC GD+  S+C  C+ +A+ R 
Sbjct:   157 AGTGFEQRRDTAFGVMQNGVVQGHGFYATTYESVYVLGQCEGDIGDSDCSGCIKNALQRA 216

Query:   212 KTDCGAAKWGDMFLAKCYARYS 233
             + +CG++  G ++L KC+  YS
Sbjct:   217 QVECGSSISGQIYLHKCFVGYS 238

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2031311 AT1G63570 "AT1G63570" [Arabidopsis thaliana (taxid:3702)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 64/207 (30%), Positives = 98/207 (47%)

Query:    39 CSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQ-GQQTLYGLFQCRGDLSTADCG 97
             CS   +T  S+YE + N +LT+L  ++    Y N TI     T+YG+F CRGD++T  C 
Sbjct:    33 CSVDSFTQTSSYETNRNILLTTLSLTSSLVHYLNATIGLSPDTVYGMFLCRGDINTTSCS 92

Query:    98 RCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLG-VEDKTVVVK---KCGPLIG-Y 152
              CV  A  ++ T C  +    +  D C V+Y N+SF    E K V+V+   +  P    +
Sbjct:    93 DCVQTAAIEIATNCTLNKRAFIYYDECMVRYSNVSFFSEFESKPVIVRYSLRSAPNSNRF 152

Query:   153 DSDASTRRDAVLGYLGSS-------DGSYKPYRVGGSGDVTGVAQCVGDLSASECQDCLS 205
             +   S + D ++  +  S       +   +  ++ GS D+  + QC  DL  S C  CL 
Sbjct:   153 NQTLSNKLDQLIPNVSPSTLIPYFVEDQERVTQLEGSYDLVSMIQCSPDLDPSNCTICLR 212

Query:   206 DAIGRLKTDCGAAKWGDMFLAKCYARY 232
              A   + T CG      +F  KC  RY
Sbjct:   213 FAYATVSTCCGVPSSALIFTPKCILRY 239

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2172492 PDLP1 "plasmodesmata-located protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 62/214 (28%), Positives = 99/214 (46%)

Query:    37 GGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQGQQT--LYGLFQCRGDLSTA 94
             G  +Q+   P   +  ++ ++ TSLV+ +  SS+ + T     T  + G+FQCRGDL  A
Sbjct:    32 GCANQKSPDPTGVFSQNLKNLFTSLVSQSSQSSFASVTSGTDNTTAVIGVFQCRGDLQNA 91

Query:    95 DCGRCVAHAVSQLGTLC---LDSCGGVL----QLDGCFVKYDNISFLGVEDKTVVVKKCG 147
              C  CV+     +  LC    D  G V+     L GC+++Y++  F       ++ + CG
Sbjct:    92 QCYDCVSKIPKLVSKLCGGGRDD-GNVVAARVHLAGCYIRYESSGFRQTSGTEMLFRVCG 150

Query:   148 PLIGYDSDASTRRDAVLGYL--GSSDGSYKPYRVGG---SGDVTGV---AQCVGDLSASE 199
                  D     +R+   G    G   GS      GG   +G    V    QC G L  S+
Sbjct:   151 KKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLGQCEGSLGNSD 210

Query:   200 CQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARYS 233
             C +C+ D   + K++CG +  G ++L KC+  YS
Sbjct:   211 CGECVKDGFEKAKSECGESNSGQVYLQKCFVSYS 244

GO:0005576 "extracellular region" evidence=ISM

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2031341 AT1G63550 [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 67/214 (31%), Positives = 103/214 (48%)

Query:    35 VFGGCSQ-QKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQG--QQTLYGLFQCRGDL 91
             +F  C+    +T  S+YE + +++L SL  S+    Y+N T +G    T++G+F CRGD+
Sbjct:    32 IFTVCNPTNNFTQTSSYETNRDTLLASLRESSSLGHYSNAT-EGLSPDTVHGMFLCRGDI 90

Query:    92 STADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLG----VEDKTVVVKKCG 147
             +TA C  CV  A +++ + C  +   V+  D C V+Y N+SF      V   T+   +  
Sbjct:    91 TTASCVDCVQTATTEIASNCTLNKRAVIYYDECMVRYSNVSFSSELEIVPSITIYSLRSA 150

Query:   148 PLIGYDSDASTRRDAVLGYLGSSDGSYKPY------RVG---GSGDVTGVAQCVGDLSAS 198
             P     +   T + + L +  SS  S  PY      RV    GS D+  + QC  DL   
Sbjct:   151 PNPTRFNQTLTEKFSELIFNVSSS-SLVPYFVEDQERVTQSEGSYDLDTMVQCSPDLDIF 209

Query:   199 ECQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARY 232
              C  CL  A  R+ T CG   +  +F  KC  R+
Sbjct:   210 NCTVCLRVAFFRISTCCGLPSYAKIFTPKCLLRF 243

GO:0005576 "extracellular region" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 59/213 (27%), Positives = 98/213 (46%)

Query:    34 FVFGGCS--QQKYTPGSAYENSVNSMLTSL---VNSAMFSSYNNFTIQGQQTLYGLFQCR 88
             F+F  CS  +  +T  S YE+++N++ + L   V S  F++ +  T      + GL  CR
Sbjct:    34 FLFHKCSDIEGSFTSKSLYESNLNNLFSQLSYKVPSTGFAASS--TGNTPNNVNGLALCR 91

Query:    89 GDLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISFLG---VEDKTVV--V 143
             GD S++DC  C+  A+ +L   C ++  G++  D C VKY + +F G    E++  +  V
Sbjct:    92 GDASSSDCRSCLETAIPELRQRCPNNKAGIVWYDNCLVKYSSTNFFGKIDFENRFYLYNV 151

Query:   144 KKCGPLIGYDSDASTRRDAVLGYLGSSDGSYKPYRVG----GSGDVTGVAQCVGDLSASE 199
             K       ++S        +     + D   K +  G    G   + G+ QC  DL +  
Sbjct:   152 KNVSDPSTFNSQTKALLTELTKKATTRDNQ-KLFATGEKNIGKNKLYGLVQCTRDLKSIT 210

Query:   200 CQDCLSDAIGRLKTDCGAAKWGDMFLAKCYARY 232
             C+ CL+  IG L   C   + G +    C  RY
Sbjct:   211 CKACLNGIIGELPNCCDGKEGGRVVGGSCNFRY 243

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZU94	CRR12_ARATH	No assigned EC number	0.6	0.9446	0.9479	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	289
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	2e-22
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	8e-15

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 89.0 bits (221), Expect = 2e-22
 Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 4/94 (4%)

Query: 44  YTPGSAYENSVNSMLTSLVNSAMFSSYNNF----TIQGQQTLYGLFQCRGDLSTADCGRC 99
            T  S +E+++N++L+SL ++A  SS   F    +     T+YGL QCRGDLS +DC  C
Sbjct: 13  TTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSASDCRSC 72

Query: 100 VAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISF 133
           +A AVS+L   C +  GG +  D CF++Y++  F
Sbjct: 73  LATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 68.6 bits (168), Expect = 8e-15
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 158 TRRDAVLGYL--GSSDGSYKPYRVGGSGD----VTGVAQCVGDLSASECQDCLSDAIGRL 211
           +  +A+L  L   ++  S K +  G SG     V G+AQC GDLSAS+C+ CL+ A+  L
Sbjct: 21  SNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSASDCRSCLATAVSEL 80

Query: 212 KTDCGAAKWGDMFLAKCYARYS 233
           +  C   K G ++   C+ RY 
Sbjct: 81  RRCCPNKKGGRIWYDSCFLRYE 102

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	289
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.92
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.87
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	96.17
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	95.45
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	95.17
PF15102	146	TMEM154: TMEM154 protein family	91.75
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	91.75
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	90.42
PF02009	299	Rifin_STEVOR: Rifin/stevor family; InterPro: IPR00	89.06
PF14610	189	DUF4448: Protein of unknown function (DUF4448)	88.06
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	87.4
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	86.93
PF08374	221	Protocadherin: Protocadherin; InterPro: IPR013585	84.65
PF12669	58	P12: Virus attachment protein p12 family	82.99
PF05568	189	ASFV_J13L: African swine fever virus J13L protein;	82.26
PHA03265	402	envelope glycoprotein D; Provisional	82.01
PF04689	69	S1FA: DNA binding protein S1FA; InterPro: IPR00677	81.83
PF11857	74	DUF3377: Domain of unknown function (DUF3377); Int	81.16
PF05454	290	DAG1: Dystroglycan (Dystrophin-associated glycopro	80.25

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.92  E-value=2.5e-25  Score=174.63  Aligned_cols=98  Identities=42%  Similarity=0.796  Sum_probs=75.3

Q ss_pred             ccCCC---CCCC-CCCChhHHHHHHHHHHHHhhhccC---CcceeeccC-CCcEEEEEecCCCCChhhHHHHHHHHHHHH
Q 022973           36 FGGCS---QQKY-TPGSAYENSVNSMLTSLVNSAMFS---SYNNFTIQG-QQTLYGLFQCRGDLSTADCGRCVAHAVSQL  107 (289)
Q Consensus        36 ~~~C~---~~~~-~~~s~f~~nl~~ll~~L~~~a~~~---~f~~~~~g~-~~~vYgl~qCr~Dls~~~C~~Cl~~a~~~~  107 (289)
                      |+.|+   +++| +++++|+.+++.||.+|+..++..   +|++...|. ++++|||+||++|+++++|..||+.++..+
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~   80 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANI   80 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCH
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHH
Confidence            67899   3566 578889999999999999998763   577776666 899999999999999999999999999999


Q ss_pred             hhhCCCCceEEEEcCeEEEEEccCcc
Q 022973          108 GTLCLDSCGGVLQLDGCFVKYDNISF  133 (289)
Q Consensus       108 ~~~C~~~~~a~i~~~~C~lRYs~~~F  133 (289)
                      ++.|+.++||+||+++|+||||+++|
T Consensus        81 ~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   81 SSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHhCCCCceEEEECCCEEEEEECCCC
Confidence            99999999999999999999999998

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.87  E-value=3.7e-22  Score=156.61  Aligned_cols=85  Identities=33%  Similarity=0.633  Sum_probs=68.3

Q ss_pred             ChhHHHHHHHHHHHhhhcCC--CCCCeeec----CCCcEEEEEEcCCCCChhhHHHHHHHHHHHhhhhCCCCcceEEEcC
Q 022973          153 DSDASTRRDAVLGYLGSSDG--SYKPYRVG----GSGDVTGVAQCVGDLSASECQDCLSDAIGRLKTDCGAAKWGDMFLA  226 (289)
Q Consensus       153 ~~~f~~~~~~ll~~l~~~~~--~~~~f~~~----~~~~vYglaQC~~DLs~~~C~~CL~~a~~~i~~~c~~~~ggri~~~  226 (289)
                      ++.|++++.+||..|...+.  .+.+|+++    +.++||||+||++||++++|..||+.++.+++++|+.++||+|+++
T Consensus        16 ~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~~v~~~   95 (106)
T PF01657_consen   16 NSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGGRVWYD   95 (106)
T ss_dssp             T-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSEEEEES
T ss_pred             CchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceEEEECC
Confidence            45699999999999975422  12568775    4668999999999999999999999999999999999999999999


Q ss_pred             CeeEEEccCCC
Q 022973          227 KCYARYSEGGD  237 (289)
Q Consensus       227 ~C~lRYe~~~f  237 (289)
                      +|+||||+++|
T Consensus        96 ~C~lRY~~~~F  106 (106)
T PF01657_consen   96 SCFLRYENYPF  106 (106)
T ss_dssp             SEEEEEESS--
T ss_pred             CEEEEEECCCC
Confidence            99999999987

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=96.17  E-value=0.0021  Score=51.42  Aligned_cols=33  Identities=21%  Similarity=0.383  Sum_probs=21.3

Q ss_pred             CcceEEEEehHHHHHHHHHHHHHHHHHHHhhcC
Q 022973          252 EIEKTLAILIGMIAGIALLVIFLSSIRRLCDGK  284 (289)
Q Consensus       252 ~~~~~~~Ivv~~~~~~~~~~~~~~~~~~~~~~~  284 (289)
                      +...++.||+|++++++++|+++.|+.||++||
T Consensus        62 s~~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   62 SEPAIIGIIFGVMAGVIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             S-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             cccceeehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            345578899999999887776665554444443

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=95.45  E-value=0.01  Score=37.88  Aligned_cols=15  Identities=13%  Similarity=0.246  Sum_probs=7.8

Q ss_pred             EEEEehHHHHHHHHH
Q 022973          256 TLAILIGMIAGIALL  270 (289)
Q Consensus       256 ~~~Ivv~~~~~~~~~  270 (289)
                      .++++||+++.++++
T Consensus        14 a~~VvVPV~vI~~vl   28 (40)
T PF08693_consen   14 AVGVVVPVGVIIIVL   28 (40)
T ss_pred             EEEEEechHHHHHHH
Confidence            355567765543333

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=95.17  E-value=0.02  Score=35.88  Aligned_cols=21  Identities=29%  Similarity=0.705  Sum_probs=16.6

Q ss_pred             EEEEehHHHHHHHHHHHHHHH
Q 022973          256 TLAILIGMIAGIALLVIFLSS  276 (289)
Q Consensus       256 ~~~Ivv~~~~~~~~~~~~~~~  276 (289)
                      +++||++++++++++++++++
T Consensus         5 ~IaIIv~V~vg~~iiii~~~~   25 (38)
T PF02439_consen    5 TIAIIVAVVVGMAIIIICMFY   25 (38)
T ss_pred             hhhHHHHHHHHHHHHHHHHHH
Confidence            688999999998877765554

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PF15102 TMEM154: TMEM154 protein family

Probab=91.75  E-value=0.13  Score=42.30  Aligned_cols=15  Identities=40%  Similarity=0.518  Sum_probs=9.6

Q ss_pred             EEEEehHHHHHHHHH
Q 022973          256 TLAILIGMIAGIALL  270 (289)
Q Consensus       256 ~~~Ivv~~~~~~~~~  270 (289)
                      ++.|+||.|+.++|+
T Consensus        58 iLmIlIP~VLLvlLL   72 (146)
T PF15102_consen   58 ILMILIPLVLLVLLL   72 (146)
T ss_pred             EEEEeHHHHHHHHHH
Confidence            788889955444333

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=91.75  E-value=0.061  Score=34.32  Aligned_cols=27  Identities=22%  Similarity=0.471  Sum_probs=19.7

Q ss_pred             CcceEEEEehHHHHHHHHHHHHH-HHHH
Q 022973          252 EIEKTLAILIGMIAGIALLVIFL-SSIR  278 (289)
Q Consensus       252 ~~~~~~~Ivv~~~~~~~~~~~~~-~~~~  278 (289)
                      +..+.++|.+++++.++++++.+ .|+.
T Consensus         6 ~~~~~vaIa~~VvVPV~vI~~vl~~~l~   33 (40)
T PF08693_consen    6 SNSNTVAIAVGVVVPVGVIIIVLGAFLF   33 (40)
T ss_pred             CCCceEEEEEEEEechHHHHHHHHHHhh
Confidence            44568999999999987776554 4444

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=90.42  E-value=0.18  Score=38.64  Aligned_cols=21  Identities=19%  Similarity=0.164  Sum_probs=13.5

Q ss_pred             CCcceEEEEehHHHHHHHHHH
Q 022973          251 EEIEKTLAILIGMIAGIALLV  271 (289)
Q Consensus       251 ~~~~~~~~Ivv~~~~~~~~~~  271 (289)
                      .+.+.|..|+|++++++.+++
T Consensus        63 ls~gaiagi~vg~~~~v~~lv   83 (96)
T PTZ00382         63 LSTGAIAGISVAVVAVVGGLV   83 (96)
T ss_pred             cccccEEEEEeehhhHHHHHH
Confidence            345568888888766554444

>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world

Probab=89.06  E-value=0.22  Score=46.07  Aligned_cols=15  Identities=7%  Similarity=0.177  Sum_probs=10.2

Q ss_pred             HHHHHHHHHHHhhhc
Q 022973           52 NSVNSMLTSLVNSAM   66 (289)
Q Consensus        52 ~nl~~ll~~L~~~a~   66 (289)
                      ...++++...-..++
T Consensus        35 PeMK~Vme~F~rqTs   49 (299)
T PF02009_consen   35 PEMKSVMENFDRQTS   49 (299)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            567777777766654

Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].

>PF14610 DUF4448: Protein of unknown function (DUF4448)

Probab=88.06  E-value=0.31  Score=41.89  Aligned_cols=27  Identities=15%  Similarity=0.181  Sum_probs=18.1

Q ss_pred             ceEEEEehHHHHHHHHHHHHHHHHHHH
Q 022973          254 EKTLAILIGMIAGIALLVIFLSSIRRL  280 (289)
Q Consensus       254 ~~~~~Ivv~~~~~~~~~~~~~~~~~~~  280 (289)
                      ...++|+||++++++++++.++++|.|
T Consensus       157 ~~~laI~lPvvv~~~~~~~~~~~~~~R  183 (189)
T PF14610_consen  157 KYALAIALPVVVVVLALIMYGFFFWNR  183 (189)
T ss_pred             ceeEEEEccHHHHHHHHHHHhhheeec
Confidence            347999999988776666544444433

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=87.40  E-value=0.17  Score=35.59  Aligned_cols=20  Identities=15%  Similarity=0.489  Sum_probs=0.0

Q ss_pred             eEEEEehHHHHHHHHHHHHH
Q 022973          255 KTLAILIGMIAGIALLVIFL  274 (289)
Q Consensus       255 ~~~~Ivv~~~~~~~~~~~~~  274 (289)
                      ...++|.++++++++.++++
T Consensus        10 vlaavIaG~Vvgll~ailLI   29 (64)
T PF01034_consen   10 VLAAVIAGGVVGLLFAILLI   29 (64)
T ss_dssp             --------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            35667777766655444333

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=86.93  E-value=0.25  Score=40.88  Aligned_cols=21  Identities=19%  Similarity=0.320  Sum_probs=11.6

Q ss_pred             EEEEehHHHHHHHHHHHHHHH
Q 022973          256 TLAILIGMIAGIALLVIFLSS  276 (289)
Q Consensus       256 ~~~Ivv~~~~~~~~~~~~~~~  276 (289)
                      +|-+||||-+++++++++++|
T Consensus        51 VIGvVVGVGg~ill~il~lvf   71 (154)
T PF04478_consen   51 VIGVVVGVGGPILLGILALVF   71 (154)
T ss_pred             EEEEEecccHHHHHHHHHhhe
Confidence            566677765555544444444

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains

Probab=84.65  E-value=1.3  Score=38.75  Aligned_cols=22  Identities=27%  Similarity=0.605  Sum_probs=10.5

Q ss_pred             EEEEehHHHHHHHHHHHHHHHHH
Q 022973          256 TLAILIGMIAGIALLVIFLSSIR  278 (289)
Q Consensus       256 ~~~Ivv~~~~~~~~~~~~~~~~~  278 (289)
                      +++||.|+++++ |+|++..++|
T Consensus        40 ~iaiVAG~~tVI-LVI~i~v~vR   61 (221)
T PF08374_consen   40 MIAIVAGIMTVI-LVIFIVVLVR   61 (221)
T ss_pred             eeeeecchhhhH-HHHHHHHHHH
Confidence            456666655433 3333333444

They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].

>PF12669 P12: Virus attachment protein p12 family

Probab=82.99  E-value=2.6  Score=29.19  Aligned_cols=6  Identities=67%  Similarity=1.326  Sum_probs=2.6

Q ss_pred             EehHHH
Q 022973          259 ILIGMI  264 (289)
Q Consensus       259 Ivv~~~  264 (289)
                      |||+++
T Consensus         2 iII~~I    7 (58)
T PF12669_consen    2 IIIGII    7 (58)
T ss_pred             eeHHHH
Confidence            444443

>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ]

Probab=82.26  E-value=0.94  Score=37.16  Aligned_cols=27  Identities=15%  Similarity=0.293  Sum_probs=15.3

Q ss_pred             EEEEehHHHHHHHHHHHHHHHHHHHhh
Q 022973          256 TLAILIGMIAGIALLVIFLSSIRRLCD  282 (289)
Q Consensus       256 ~~~Ivv~~~~~~~~~~~~~~~~~~~~~  282 (289)
                      ...|+|+|++.++++++.++|+.+|+|
T Consensus        31 m~tILiaIvVliiiiivli~lcssRKk   57 (189)
T PF05568_consen   31 MYTILIAIVVLIIIIIVLIYLCSSRKK   57 (189)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhH
Confidence            345667777666655555555444443

>PHA03265 envelope glycoprotein D; Provisional

Probab=82.01  E-value=1.3  Score=41.55  Aligned_cols=26  Identities=31%  Similarity=0.363  Sum_probs=12.0

Q ss_pred             EEEEehH-HHHHHHHHHHHHHHHHHHh
Q 022973          256 TLAILIG-MIAGIALLVIFLSSIRRLC  281 (289)
Q Consensus       256 ~~~Ivv~-~~~~~~~~~~~~~~~~~~~  281 (289)
                      .+-|+|| .+++++++-+++++.|||+
T Consensus       349 ~~g~~ig~~i~glv~vg~il~~~~rr~  375 (402)
T PHA03265        349 FVGISVGLGIAGLVLVGVILYVCLRRK  375 (402)
T ss_pred             ccceEEccchhhhhhhhHHHHHHhhhh
Confidence            3334443 3445554444444555544

>PF04689 S1FA: DNA binding protein S1FA; InterPro: IPR006779 S1FA is an unusual small plant peptide of only 70 amino acids with a basic domain which contains a nuclear localization signal and a putative DNA binding helix

Probab=81.83  E-value=3.5  Score=28.96  Aligned_cols=22  Identities=5%  Similarity=0.033  Sum_probs=12.6

Q ss_pred             CCCCcceEEEEehHHHHHHHHH
Q 022973          249 NDEEIEKTLAILIGMIAGIALL  270 (289)
Q Consensus       249 ~~~~~~~~~~Ivv~~~~~~~~~  270 (289)
                      ++-+.+.|+.|+|+-++.++++
T Consensus         8 KGlnPGlIVLlvV~g~ll~flv   29 (69)
T PF04689_consen    8 KGLNPGLIVLLVVAGLLLVFLV   29 (69)
T ss_pred             cCCCCCeEEeehHHHHHHHHHH
Confidence            4445566777777665544433

S1FA is highly conserved between dicotyledonous and monocotyledonous plants and may be a DNA-binding protein that specifically recognises the negative promoter element S1F [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF11857 DUF3377: Domain of unknown function (DUF3377); InterPro: IPR021805 This domain is functionally uncharacterised and found at the C terminus of peptidases belonging to MEROPS peptidase family M10A, membrane-type matrix metallopeptidases (clan MA)

Probab=81.16  E-value=2.5  Score=30.68  Aligned_cols=26  Identities=15%  Similarity=0.331  Sum_probs=18.6

Q ss_pred             CCcceEEEEehHHHHHHHHHHHHHHH
Q 022973          251 EEIEKTLAILIGMIAGIALLVIFLSS  276 (289)
Q Consensus       251 ~~~~~~~~Ivv~~~~~~~~~~~~~~~  276 (289)
                      .+..+.++||||.+.++.++++.+..
T Consensus        26 ~~~~~avaVviPl~L~LCiLvl~yai   51 (74)
T PF11857_consen   26 GGTVNAVAVVIPLVLLLCILVLIYAI   51 (74)
T ss_pred             CCceeEEEEeHHHHHHHHHHHHHHHh
Confidence            34455899999998887777655543

; GO: 0004222 metalloendopeptidase activity

>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5

Probab=80.25  E-value=0.54  Score=43.24  Aligned_cols=9  Identities=22%  Similarity=0.575  Sum_probs=0.0

Q ss_pred             cEEEEEEcC
Q 022973          184 DVTGVAQCV  192 (289)
Q Consensus       184 ~vYglaQC~  192 (289)
                      ++.++.+|.
T Consensus       101 sv~~~G~C~  109 (290)
T PF05454_consen  101 SVIPIGSCQ  109 (290)
T ss_dssp             ---------
T ss_pred             EEEEeeccC
Confidence            566777776

5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	289
3a2e_A	108	Crystal Structure Of Ginkbilobin-2, The Novel Antif		2e-10

>pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal Protein From Ginkgo Biloba Seeds Length = 108

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 34  FVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSYNNFTIQ----GQQTLYGLFQCRG 89
           FV   C+ QK   GS +  ++ +ML  L  +  FS Y+  T +    G  T YG   C+ 
Sbjct: 5   FVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQ 64
Query: 90  DLSTADCGRCVAHAVSQLGTLCLDSCGGVLQLDGCFVKYDNISF 133
            +S +DC  C+++ V+++ ++C ++ G  +QL  CF++Y+  SF
Sbjct: 65  SISQSDCTACLSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF 108

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	289
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	4e-31
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	1e-10

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	289
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.96
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.95
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.9
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.88
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	96.18
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	95.92
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	95.46
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	93.07
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	92.59
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	91.55
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	90.65

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.96  E-value=8.3e-29  Score=193.93  Aligned_cols=103  Identities=30%  Similarity=0.661  Sum_probs=93.5

Q ss_pred             CCcccccCCCCCCCCCCChhHHHHHHHHHHHHhhhccCCc--ceeeccC--CCcEEEEEecCCCCChhhHHHHHHHHHHH
Q 022973           31 TETFVFGGCSQQKYTPGSAYENSVNSMLTSLVNSAMFSSY--NNFTIQG--QQTLYGLFQCRGDLSTADCGRCVAHAVSQ  106 (289)
Q Consensus        31 ~~~~~~~~C~~~~~~~~s~f~~nl~~ll~~L~~~a~~~~f--~~~~~g~--~~~vYgl~qCr~Dls~~~C~~Cl~~a~~~  106 (289)
                      .+.++++.|++++|+++++|++||+.||+.|+++++.+++  ++...|.  +++||||+|||||+++++|..||+.|+.+
T Consensus         2 ~t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~   81 (108)
T 3a2e_A            2 NTAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNR   81 (108)
T ss_dssp             CCCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred             CcceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999887543  3334443  68999999999999999999999999999


Q ss_pred             HhhhCCCCceEEEEcCeEEEEEccCcc
Q 022973          107 LGTLCLDSCGGVLQLDGCFVKYDNISF  133 (289)
Q Consensus       107 ~~~~C~~~~~a~i~~~~C~lRYs~~~F  133 (289)
                      ++++||+++||+||+++|+||||+++|
T Consensus        82 ~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           82 IFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            999999999999999999999999998

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.90  E-value=1.8e-23  Score=163.53  Aligned_cols=99  Identities=24%  Similarity=0.396  Sum_probs=82.5

Q ss_pred             cceeEeccCCCccC-ChhHHHHHHHHHHHhhhcCC-CCCCeeec-----CCCcEEEEEEcCCCCChhhHHHHHHHHHHHh
Q 022973          139 KTVVVKKCGPLIGY-DSDASTRRDAVLGYLGSSDG-SYKPYRVG-----GSGDVTGVAQCVGDLSASECQDCLSDAIGRL  211 (289)
Q Consensus       139 ~~~~~~~c~~~~~~-~~~f~~~~~~ll~~l~~~~~-~~~~f~~~-----~~~~vYglaQC~~DLs~~~C~~CL~~a~~~i  211 (289)
                      ...+++.|+..+.. ++.|+++++.||..|..++. +...|+++     +.++||||+||+|||++++|+.||+.++.++
T Consensus         3 t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~   82 (108)
T 3a2e_A            3 TAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRI   82 (108)
T ss_dssp             CCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTH
T ss_pred             cceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence            34667889876544 68899999999999975422 22334432     3468999999999999999999999999999


Q ss_pred             hhhCCCCcceEEEcCCeeEEEccCCC
Q 022973          212 KTDCGAAKWGDMFLAKCYARYSEGGD  237 (289)
Q Consensus       212 ~~~c~~~~ggri~~~~C~lRYe~~~f  237 (289)
                      +++|++++||+||+++|+||||+++|
T Consensus        83 ~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           83 FSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHCCCCceEEEECCCEEEEEeCCcC
Confidence            99999999999999999999999987

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=96.18  E-value=0.0012  Score=42.10  Aligned_cols=9  Identities=11%  Similarity=0.715  Sum_probs=5.0

Q ss_pred             EEEEehHHH
Q 022973          256 TLAILIGMI  264 (289)
Q Consensus       256 ~~~Ivv~~~  264 (289)
                      +.++||+++
T Consensus        14 Ia~~vVGvl   22 (44)
T 2jwa_A           14 IISAVVGIL   22 (44)
T ss_dssp             HHHHHHHHH
T ss_pred             hHHHHHHHH
Confidence            455566644

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=95.92  E-value=0.0022  Score=40.89  Aligned_cols=31  Identities=23%  Similarity=0.213  Sum_probs=14.3

Q ss_pred             EEEehHHHHHHHH---HHHHHHHHHHHhhcCCCC
Q 022973          257 LAILIGMIAGIAL---LVIFLSSIRRLCDGKGKG  287 (289)
Q Consensus       257 ~~Ivv~~~~~~~~---~~~~~~~~~~~~~~~~~~  287 (289)
                      -+|+.++++++++   +++..+|++|++++++||
T Consensus        10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~kr   43 (44)
T 2l2t_A           10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIKKKR   43 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred             ceEEEeehHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence            3355565554332   223334555554444443

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=95.46  E-value=0.0065  Score=38.77  Aligned_cols=12  Identities=25%  Similarity=0.490  Sum_probs=6.4

Q ss_pred             EEEehHHHHHHH
Q 022973          257 LAILIGMIAGIA  268 (289)
Q Consensus       257 ~~Ivv~~~~~~~  268 (289)
                      -+|..+++++++
T Consensus        11 ~~IA~gVVgGv~   22 (44)
T 2ks1_B           11 PSIATGMVGALL   22 (44)
T ss_dssp             SSSTHHHHHHHH
T ss_pred             ceEEeehhHHHH
Confidence            346666655443

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=93.07  E-value=0.061  Score=34.21  Aligned_cols=32  Identities=6%  Similarity=-0.001  Sum_probs=16.4

Q ss_pred             ceEEEEehHHHHHHHHHHHHHHHHHHHhhcCC
Q 022973          254 EKTLAILIGMIAGIALLVIFLSSIRRLCDGKG  285 (289)
Q Consensus       254 ~~~~~Ivv~~~~~~~~~~~~~~~~~~~~~~~~  285 (289)
                      .-+.+-||+-++.++++++.++|++|++++++
T Consensus        11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~   42 (44)
T 2ks1_B           11 PSIATGMVGALLLLLVVALGIGLFMRRRHIVR   42 (44)
T ss_dssp             SSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             ceEEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence            34555666644555555555555555444433

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=92.59  E-value=0.017  Score=35.69  Aligned_cols=28  Identities=29%  Similarity=0.407  Sum_probs=17.6

Q ss_pred             CcceEEEEehHHHHHHHHHHHHHHHHHH
Q 022973          252 EIEKTLAILIGMIAGIALLVIFLSSIRR  279 (289)
Q Consensus       252 ~~~~~~~Ivv~~~~~~~~~~~~~~~~~~  279 (289)
                      +.+.+.-||+++++++++++...+|+||
T Consensus         9 s~GaIAGiVvG~v~gv~li~~l~~~~~r   36 (38)
T 2k1k_A            9 TGGEIVAVIFGLLLGAALLLGILVFRSR   36 (38)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCceeeeehHHHHHHHHHHHHHHHHee
Confidence            3444666788887777766655555554

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=91.55  E-value=0.094  Score=33.31  Aligned_cols=18  Identities=6%  Similarity=-0.007  Sum_probs=8.9

Q ss_pred             HHHHHHHHHHHHHHHhhc
Q 022973          266 GIALLVIFLSSIRRLCDG  283 (289)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~  283 (289)
                      .++++++++.-.||.++|
T Consensus        25 ii~~~~~~~~RRRr~~~k   42 (44)
T 2l2t_A           25 IVGLTFAVYVRRKSIKKK   42 (44)
T ss_dssp             HHHHHHHHHHHTTCSSCC
T ss_pred             HHHHHHHHHhhhhhhhhc
Confidence            344555455555555444

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=90.65  E-value=0.23  Score=31.46  Aligned_cols=10  Identities=10%  Similarity=0.308  Sum_probs=4.7

Q ss_pred             EEEEehHHHH
Q 022973          256 TLAILIGMIA  265 (289)
Q Consensus       256 ~~~Ivv~~~~  265 (289)
                      +..|+.+++.
T Consensus        11 ~~~Ia~~vVG   20 (44)
T 2jwa_A           11 LTSIISAVVG   20 (44)
T ss_dssp             HHHHHHHHHH
T ss_pred             ccchHHHHHH
Confidence            3444444444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00