Citrus Sinensis ID: 022987

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR
Secondary Structure (PSIPRED)
ccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHccccccccccccccccccccccccHHHcHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHcccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccEEEEcccccccHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mvlvneqrklsaslpLICRCIISCILVLLTQLTlslvprffaasPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSimskdpglitnefphldklvegselgvdpdnenslsrKRVRYCKICKAhvegfdhhcpafgncigqnnYFLFIVLLVGFLATEASYVACSAqfvgksqnfdksqsenDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNvrtdewvnwkkypefqviesepgesftrmrftnpydkgfLQNVKDFLSLRR
Flexible Loop (DISEMBL)
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVegselgvdpdnenslsrkRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFqviesepgesFTRMrftnpydkgflqnvkdflslrr
Low Complexity Region (SEG)
MVLVNEQRKLSASLPLICRCIISCIlvlltqltlslvPRFFAASPFIVQFALSGlvlllvQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR
Disordered region (IsUnstruct)
***********ASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVE****************KRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNF*****ENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESE***SFTRMRFTNPYDKGFLQNVKDF*****
Disordered Region (DISOPRED)
*********L*ASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESE*G**FTRMRFTNPYDKGFLQNVKDFLSLRR
Disordered Region (DISEMBL)
********KLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR
Disordered Region (DISPRO)
********KLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLR*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	289	2.2.26 [Sep-21-2011]
Q80TN5	632	Palmitoyltransferase ZDHH	yes	no	0.615	0.281	0.275	6e-11
Q8IUH5	632	Palmitoyltransferase ZDHH	yes	no	0.615	0.281	0.270	1e-10
Q3EC11	536	Probable S-acyltransferas	yes	no	0.484	0.261	0.267	4e-10
Q9NYG2	327	Palmitoyltransferase ZDHH	no	no	0.363	0.321	0.307	1e-07
Q8R173	299	Palmitoyltransferase ZDHH	no	no	0.356	0.344	0.303	2e-07
Q9UVH3	559	Palmitoyltransferase AKR1	N/A	no	0.401	0.207	0.283	3e-07
Q9NUE0	388	Palmitoyltransferase ZDHH	no	no	0.363	0.270	0.330	3e-07
Q5Y5T2	380	Palmitoyltransferase ZDHH	no	no	0.363	0.276	0.321	9e-07
Q2TGJ1	386	Palmitoyltransferase ZDHH	no	no	0.363	0.272	0.321	1e-06
Q550R7	434	Putative ZDHHC-type palmi	no	no	0.145	0.096	0.545	1e-06

>sp|Q80TN5|ZDH17_MOUSE Palmitoyltransferase ZDHHC17 OS=Mus musculus GN=Zdhhc17 PE=1 SV=2

 Score = 68.6 bits (166), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 25/203 (12%)

Query: 101 DPGLITNEFPHLDK----LVEGSELGVDPDNENSLSRKRVR--YCKICKAHVEGFDHHCP 154
           DPG+I        K    L E   L +       L RK VR  +C +C   +  FDHHCP
Sbjct: 409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query: 155 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATS 212
             GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct: 469 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCVSYWGLHCETTYTKDGFWT-YITQIATC 527

Query: 213 T------MLFSILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFT 265
           +       L S+   LW AV  M  +Y + C  + T+E +N ++Y  F+V         T
Sbjct: 528 SPWMFWMFLNSVFHFLWVAVLLMCQLYQITCLGITTNERMNARRYKHFKV---------T 578

Query: 266 RMRFTNPYDKGFLQNVKDFLSLR 288
                +P++ G ++N+ DF   R
Sbjct: 579 TTSIESPFNHGCVRNIIDFFEFR 601

Palmitoyltransferase specific for a subset of neuronal proteins, including SNAP25, DLG4/PSD95, GAD2, SYT1 and HD. May be involved in the sorting or targeting of critical proteins involved in the initiating events of endocytosis at the plasma membrane. Has transforming activity. Mediates Mg(2+) transport.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q8IUH5|ZDH17_HUMAN Palmitoyltransferase ZDHHC17 OS=Homo sapiens GN=ZDHHC17 PE=1 SV=2

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 25/203 (12%)

Query: 101 DPGLITNEFPHLDK----LVEGSELGVDPDNENSLSRKRVR--YCKICKAHVEGFDHHCP 154
           DPG+I        K    L E   L +       L RK VR  +C +C   +  FDHHCP
Sbjct: 409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query: 155 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATS 212
             GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct: 469 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCETTYTKDGFWT-YITQIATC 527

Query: 213 T------MLFSILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFT 265
           +       L S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V         T
Sbjct: 528 SPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKV---------T 578

Query: 266 RMRFTNPYDKGFLQNVKDFLSLR 288
                +P++ G ++N+ DF   R
Sbjct: 579 TTSIESPFNHGCVRNIIDFFEFR 601

Palmitoyltransferase specific for a subset of neuronal proteins, including SNAP25, DLG4/PSD95, GAD2, SYT1 and HD. May be involved in the sorting or targeting of critical proteins involved in the initiating events of endocytosis at the plasma membrane. Has transforming activity. Mediates Mg(2+) transport.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q3EC11|ZDHC2_ARATH Probable S-acyltransferase At2g14255 OS=Arabidopsis thaliana GN=At2g14255 PE=2 SV=2

 Score = 65.5 bits (158), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 17/157 (10%)

Query: 135 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQ 194
           R ++C  CK  VE FDHHCP   NC+G+ N   F+V ++  +    S+V  +       +
Sbjct: 375 RSKHCPTCKRCVEQFDHHCPWISNCVGKKNKRYFLVFVI--MGALTSFVGGTTAVQRLWR 432

Query: 195 NFDKSQSENDWVVNL------ATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWK 248
              +      W+ ++      A   + F +L  +      +   Y +  N+ T+E  N K
Sbjct: 433 GIPQVHHGESWIKHIVIEHPDAAVFLFFDLLIFIATMTLTISQSYMIARNITTNELWNAK 492

Query: 249 KYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFL 285
           +   F  +    G      RF NPY+ G  +N  DFL
Sbjct: 493 R---FSYLRGPDG------RFYNPYNHGLRRNCTDFL 520

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NYG2|ZDHC3_HUMAN Palmitoyltransferase ZDHHC3 OS=Homo sapiens GN=ZDHHC3 PE=1 SV=1

 Score = 57.8 bits (138), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 9/114 (7%)

Query: 75  VSSLIGGL-FNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDPDNE 128
           V S+I G+ FN+   + +   C  M  DPG +     T EF    +L  G  +   P   
Sbjct: 74  VYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCPKC- 132

Query: 129 NSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNN--YFLFIVLLVGFLATEA 180
            S+   R  +C +CK  +   DHHCP   NC+G+NN  YF+   + +  ++  A
Sbjct: 133 CSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHA 186

Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q8R173|ZDHC3_MOUSE Palmitoyltransferase ZDHHC3 OS=Mus musculus GN=Zdhhc3 PE=1 SV=1

 Score = 57.0 bits (136), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 9/112 (8%)

Query: 77  SLIGGL-FNIEVAMIIIGLCSIMSKDPGLI-----TNEFPHLDKLVEGSELGVDPDNENS 130
           S+I G+ FN+   + +   C  M  DPG +     T EF    +L  G  +   P    S
Sbjct: 76  SIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCPKC-CS 134

Query: 131 LSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNN--YFLFIVLLVGFLATEA 180
           +   R  +C +CK  +   DHHCP   NC+G+NN  YF+   + +  ++  A
Sbjct: 135 IKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHA 186

Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9UVH3|AKR1_MORAP Palmitoyltransferase AKR1 (Fragment) OS=Mortierella alpina PE=3 SV=1

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 11/127 (8%)

Query: 135 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGK-S 193
           R ++CK C   V  FDHHCP   NCIG  N+  F++ L  FL++   Y   S +++   S
Sbjct: 284 RSKHCKFCNRCVAKFDHHCPWIYNCIGAKNHRAFLIFLALFLSSVPIYAYLSFEYLHVLS 343

Query: 194 QNFDKSQSE---------NDWVVNLATSTMLF-SILQLLWQAVFFMWHIYCVCFNVRTDE 243
            ++    S+           +  +  T+T+ F S+ Q+ W  + F+  +Y V     T+E
Sbjct: 344 PSYVPVSSDPCLLGDTLCGYFQYDAFTTTLAFWSLFQMTWPGLLFLVQLYQVGQAKTTNE 403

Query: 244 WVNWKKY 250
            +N++++
Sbjct: 404 AMNFQRH 410

Palmitoyltransferase specific for casein kinase 1.

Mortierella alpina (taxid: 64518)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NUE0|ZDH18_HUMAN Palmitoyltransferase ZDHHC18 OS=Homo sapiens GN=ZDHHC18 PE=2 SV=2

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 135 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFV---G 191
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC    +    
Sbjct: 204 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLRA 263

Query: 192 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 243
           +  NF  +  E    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 264 QGSNFLSTLKETPASV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 311

Has palmitoyltransferase activity towards HRAS and LCK.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5Y5T2|ZDH18_MOUSE Palmitoyltransferase ZDHHC18 OS=Mus musculus GN=Zdhhc18 PE=1 SV=4

 Score = 54.3 bits (129), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 135 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVAC---SAQFVG 191
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC       + 
Sbjct: 196 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLLS 255

Query: 192 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 243
           +  NF  +  +    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 256 QGSNFLSALKKTPASV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 303

Has palmitoyltransferase activity towards HRAS and LCK.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q2TGJ1|ZDH18_RAT Palmitoyltransferase ZDHHC18 OS=Rattus norvegicus GN=Zdhhc18 PE=2 SV=1

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 135 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVAC---SAQFVG 191
           R  +C +C   VE FDHHCP  GNC+G+ NY  F   ++      A   AC       + 
Sbjct: 202 RTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFACVVTHLTLLS 261

Query: 192 KSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE 243
           +  NF  + ++    V L      FSI  +L  + F   H Y V  N+ T+E
Sbjct: 262 QGSNFLSALNKTPAGV-LELVICFFSIWSILGLSGF---HTYLVASNLTTNE 309

Has palmitoyltransferase activity towards HRAS and LCK.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q550R7|ZDHC1_DICDI Putative ZDHHC-type palmitoyltransferase 1 OS=Dictyostelium discoideum GN=DDB_G0276997 PE=3 SV=3

 Score = 53.9 bits (128), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 135 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNY--FLFIVLLVGFL 176
           R  +C IC   VE FDHHCP  GNCIG+ NY  FL+ +  +GFL
Sbjct: 127 RANHCGICNNCVERFDHHCPWVGNCIGRRNYQTFLYFLYSLGFL 170

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
297746095	311	unnamed protein product [Vitis vinifera]	0.955	0.887	0.503	7e-74
224106499	251	predicted protein [Populus trichocarpa]	0.667	0.768	0.634	9e-71
255585828	291	zinc finger protein, putative [Ricinus c	0.840	0.835	0.519	7e-66
357112878	313	PREDICTED: palmitoyltransferase ZDHHC17-	0.927	0.856	0.413	6e-62
225434978	311	PREDICTED: probable S-acyltransferase At	0.916	0.852	0.437	5e-60
226495287	315	DHHC zinc finger domain containing prote	0.955	0.876	0.392	4e-59
195619870	315	DHHC zinc finger domain containing prote	0.955	0.876	0.389	1e-58
414866097	300	TPA: hypothetical protein ZEAMMB73_41357	0.955	0.92	0.399	1e-56
218192534	328	hypothetical protein OsI_10951 [Oryza sa	0.820	0.722	0.427	5e-56
222624656	370	hypothetical protein OsJ_10323 [Oryza sa	0.903	0.705	0.399	2e-55

>gi|297746095|emb|CBI16151.3| unnamed protein product [Vitis vinifera]

 Score =  283 bits (723), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 152/302 (50%), Positives = 192/302 (63%), Gaps = 26/302 (8%)

Query: 1   MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLV 60
           M+++++Q+ +  SL LI RC+ISCI V LTQ  LS+VPRFFAAS  ++Q  LS L+LL++
Sbjct: 1   MLVLDDQKSMRISLKLIGRCMISCIFVFLTQFALSIVPRFFAASSLLIQLPLSALLLLVL 60

Query: 61  QTLCGWCRRLLGVS-------------------------VSSLIGGLFNIEVAMIIIGLC 95
                 CRR LGV                          +S L+G + N E+ M+IIGL 
Sbjct: 61  LGAGRCCRRFLGVYASAPAFVFFNLLFIWGVYIVILRKVISPLMGIVLNGEIVMLIIGLY 120

Query: 96  SIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPA 155
           SI+S DPG +T+     D   E S    +   E S S +RVRYCK CKA+V+GFDHHCPA
Sbjct: 121 SILSSDPGFVTSRSSCSDNHAEDSFSEDEAHFEGSFSSRRVRYCKSCKAYVKGFDHHCPA 180

Query: 156 FGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTML 215
           FGNCIGQ N+ LF+VLLVGF+ TEASY+  S +F  K Q  D++  E     NL  STML
Sbjct: 181 FGNCIGQKNHVLFMVLLVGFVITEASYIMDSFKFATKFQKMDETGQETSLSENLVISTML 240

Query: 216 FSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQ-VIESEPGESFTRMRFTNPYD 274
           F +LQ+LWQ VF  WHIYCVC N+RTDEW+NWKKYPEFQ +I  +PG S    RF NPY+
Sbjct: 241 FCLLQVLWQGVFLTWHIYCVCVNIRTDEWINWKKYPEFQIIIPIQPGLSSEGRRFRNPYN 300

Query: 275 KG 276
           K 
Sbjct: 301 KA 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106499|ref|XP_002314187.1| predicted protein [Populus trichocarpa] gi|222850595|gb|EEE88142.1| predicted protein [Populus trichocarpa]

 Score =  273 bits (697), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 123/194 (63%), Positives = 151/194 (77%), Gaps = 1/194 (0%)

Query: 95  CSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCP 154
           C I+S DPGL+T+     +KL+E    GV+  NE S   KRVRYCK CKA+++GFDHHCP
Sbjct: 56  CIILSSDPGLVTHGSSDANKLIETKAFGVEAHNEGSALLKRVRYCKSCKAYIKGFDHHCP 115

Query: 155 AFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTM 214
           AFGNCIGQNNY LF++LL GFL TEASY+ CS+QF   SQ    +  E D   +L  STM
Sbjct: 116 AFGNCIGQNNYVLFMILLAGFLTTEASYIVCSSQFSRGSQILGGTWFETDLAGSLVVSTM 175

Query: 215 LFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQ-VIESEPGESFTRMRFTNPY 273
           LFS+LQ++WQ VFF WH+YC+CFN+RTDEW+NWKKYPEFQ VI+S+PGESFTR+ F NPY
Sbjct: 176 LFSLLQVIWQGVFFTWHLYCICFNIRTDEWINWKKYPEFQFVIQSQPGESFTRVMFKNPY 235

Query: 274 DKGFLQNVKDFLSL 287
           D G+LQNVK+FLS+
Sbjct: 236 DNGYLQNVKEFLSV 249

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585828|ref|XP_002533592.1| zinc finger protein, putative [Ricinus communis] gi|223526536|gb|EEF28797.1| zinc finger protein, putative [Ricinus communis]

 Score =  256 bits (655), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 136/262 (51%), Positives = 176/262 (67%), Gaps = 19/262 (7%)

Query: 4   VNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTL 63
           + ++R+  A LP   RC +S ILVLLTQ +LSL+PRFF+AS F++Q  LSG+V+L V   
Sbjct: 1   MQQERRKEALLPKFGRCTVSSILVLLTQFSLSLIPRFFSASSFLLQLTLSGIVVLFVLGF 60

Query: 64  CGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPH-LDKLVEGSELG 122
             WCRRLLGV  S+          A + + L  I S    ++    P  +D +  G  + 
Sbjct: 61  GRWCRRLLGVHASA---------PAFVFLNLLFIWSVYFCVVRPAVPFFMDAIFSGEVVM 111

Query: 123 V---DPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATE 179
           +   DP     L  KRVRYCK CKA+V+GFDHHCPAFGNCIGQ+N+ LF+VLL+GFL+TE
Sbjct: 112 LFIGDP-----LLLKRVRYCKSCKAYVKGFDHHCPAFGNCIGQSNHALFMVLLLGFLSTE 166

Query: 180 ASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNV 239
           ASY+ CS QFV  SQ    ++ E      L T TMLF++LQ+LWQ +F  WHIYC+CFN+
Sbjct: 167 ASYIMCSLQFVRGSQIEPVTRFELGLRGTLVTGTMLFTLLQVLWQGIFMAWHIYCICFNI 226

Query: 240 RTDEWVNWKKYPEFQVI-ESEP 260
           RTDEW+NWKKYPEFQVI +S+P
Sbjct: 227 RTDEWINWKKYPEFQVIAQSQP 248

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357112878|ref|XP_003558232.1| PREDICTED: palmitoyltransferase ZDHHC17-like [Brachypodium distachyon]

 Score =  243 bits (621), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 27/295 (9%)

Query: 16  LICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSV 75
           ++   ++SC LVL +QL ++ VPRFF +   +    ++GLV L    +  + RR +GV+ 
Sbjct: 18  VVLSALVSCGLVLFSQLAVATVPRFFPSLSLLAMLPVAGLVFLAAIVVGRFWRRFIGVAA 77

Query: 76  S-------------------------SLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFP 110
           S                         SL+  L N E A+++ GL  I+S DPG++  E  
Sbjct: 78  SAPLFVLFNVLFMWGVYIFVIRGDTSSLLDMLINAECALLLWGLYRILSGDPGIVAYESS 137

Query: 111 HLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIV 170
            L++      +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LFI 
Sbjct: 138 FLEEAGCNDFVDAICSSEKHPSLSRVRHCNSCKANVRGYDHHCPAFGNCIGQKNHRLFIA 197

Query: 171 LLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMW 230
           LL GF+  E++Y  CS +++ +  N    ++EN   +N+   TMLFS+LQ+LWQ VF +W
Sbjct: 198 LLTGFVVAESTYTMCSTKYITRCINSGTIRTENPLSLNMVIGTMLFSVLQVLWQVVFLIW 257

Query: 231 HIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFL 285
           H+Y +CFN++TDEW+NWKKYPEFQ+ E EP +S + ++F NPYDKG L N+++FL
Sbjct: 258 HVYGICFNIKTDEWINWKKYPEFQMKE-EP-QSDSEIKFVNPYDKGMLCNIREFL 310

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434978|ref|XP_002281137.1| PREDICTED: probable S-acyltransferase At2g14255-like [Vitis vinifera]

 Score =  237 bits (604), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 144/329 (43%), Positives = 187/329 (56%), Gaps = 64/329 (19%)

Query: 1   MVLVNEQRKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLV 60
           M+++++Q+ +  SL LI RC+ISCI V LTQ  LS+VPRFFAAS  ++Q  LS L+LL++
Sbjct: 1   MLVLDDQKSMRISLKLIGRCMISCIFVFLTQFALSIVPRFFAASSLLIQLPLSALLLLVL 60

Query: 61  QTLCGWCRRLLGVS-------------------------VSSLIGGLFNIEVAMIIIGLC 95
                 CRR LGV                          +S L+G + N E+ M+IIGL 
Sbjct: 61  LGAGRCCRRFLGVYASAPAFVFFNLLFIWGVYIVILRKVISPLMGIVLNGEIVMLIIGLY 120

Query: 96  SIMSKDPGLITN---------------EFPHLD--KLVEGSELGVDPDNENSLSRKRVRY 138
           SI+S DPG +T+               +  H +  K + G      P  E S S +RVRY
Sbjct: 121 SILSSDPGFVTSRSSCSDNHAEDSFSEDEAHFEILKTLTGGTCHEHP-TEGSFSSRRVRY 179

Query: 139 CKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDK 198
           CK CKA+V+GFDHHCPAFGNCIGQ N+ LF+VLLVGF+ TEASY+  S +F  K Q  D+
Sbjct: 180 CKSCKAYVKGFDHHCPAFGNCIGQKNHVLFMVLLVGFVITEASYIMDSFKFATKFQKMDE 239

Query: 199 SQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQ-VIE 257
           +  E     NL  STMLF +LQ+LWQ                    +NWKKYPEFQ +I 
Sbjct: 240 TGQETSLSENLVISTMLFCLLQVLWQ--------------------INWKKYPEFQIIIP 279

Query: 258 SEPGESFTRMRFTNPYDKGFLQNVKDFLS 286
            +PG S    RF NPY+KG   N+KDFL+
Sbjct: 280 IQPGLSSEGRRFRNPYNKGVFCNMKDFLA 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495287|ref|NP_001148505.1| DHHC zinc finger domain containing protein [Zea mays] gi|223945801|gb|ACN26984.1| unknown [Zea mays] gi|414866098|tpg|DAA44655.1| TPA: DHHC zinc finger domain containing protein [Zea mays]

 Score =  234 bits (596), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 175/303 (57%), Gaps = 27/303 (8%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVS-------------------------VSSLIGGLFNIEVAMIIIGLCSIMSKDP 102
           RR +GV+                          SSL+  L N E A+++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECALLLWGFYRILSGDP 131

Query: 103 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQ 162
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 163 NNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 222
            N+ LF+ LL GF+  E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 223 WQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVK 282
           WQ VF MWHIYC+CFN++TDEW+NWKKYPEFQ+ E    +S   ++F NPYDKG L N++
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWINWKKYPEFQMKEQPRSDS--EVKFVNPYDKGMLCNIR 309

Query: 283 DFL 285
           +FL
Sbjct: 310 EFL 312

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195619870|gb|ACG31765.1| DHHC zinc finger domain containing protein [Zea mays]

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/303 (38%), Positives = 174/303 (57%), Gaps = 27/303 (8%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWC 67
           R+ S+   ++   + SC LVL +QL +++VPR F     +    ++GLV +    L    
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLFPFLSLLAMLPIAGLVFIAAIVLGRLW 71

Query: 68  RRLLGVS-------------------------VSSLIGGLFNIEVAMIIIGLCSIMSKDP 102
           RR +GV+                          SSL+  L N E  +++ G   I+S DP
Sbjct: 72  RRFIGVAASAPLFVLFNILLLWGVYVFVIRRETSSLLDMLINAECTLLLWGFYRILSGDP 131

Query: 103 GLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQ 162
           G++  +  +L++      +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ
Sbjct: 132 GIVACDSSYLEEAGCKDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQ 191

Query: 163 NNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLL 222
            N+ LF+ LL GF+  E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+L
Sbjct: 192 KNHRLFMALLTGFVVAESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVL 251

Query: 223 WQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVK 282
           WQ VF MWHIYC+CFN++TDEW+NWKKYPEFQ+ E    +S   ++F NPYDKG L N++
Sbjct: 252 WQIVFLMWHIYCICFNIKTDEWINWKKYPEFQMKEQPRSDS--EVKFVNPYDKGMLCNIR 309

Query: 283 DFL 285
           +FL
Sbjct: 310 EFL 312

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414866097|tpg|DAA44654.1| TPA: hypothetical protein ZEAMMB73_413571 [Zea mays]

 Score =  226 bits (575), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 115/288 (39%), Positives = 172/288 (59%), Gaps = 12/288 (4%)

Query: 8   RKLSASLPLICRCIISCILVLLTQLTLSLVPRFFAASPFI--------VQFALSGLVLLL 59
           R+ S+   ++   + SC LVL +QL +++VPR    +  +        +  A S  + +L
Sbjct: 12  RRSSSQWEVLWSALASCGLVLFSQLAVAMVPRLVFIAAIVLGRLWRRFIGVAASAPLFVL 71

Query: 60  VQTLCGWCRRLLGV--SVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLVE 117
              L  W   +  +    SSL+  L N E A+++ G   I+S DPG++  +  +L++   
Sbjct: 72  FNILLLWGVYVFVIRRETSSLLDMLINAECALLLWGFYRILSGDPGIVACDSSYLEEAGC 131

Query: 118 GSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLA 177
              +     +E      RVR C  CKA++ G+DHHCPAFG CIGQ N+ LF+ LL GF+ 
Sbjct: 132 KDFVEAIYSSEKLPMLSRVRQCTWCKANIRGYDHHCPAFGTCIGQKNHRLFMALLTGFVV 191

Query: 178 TEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCF 237
            E++Y  CS +++ +  +    +SEN   +N+  ST LFSILQ+LWQ VF MWHIYC+CF
Sbjct: 192 AESTYTMCSTKYITRCISSGTIRSENPVSLNIVISTTLFSILQVLWQIVFLMWHIYCICF 251

Query: 238 NVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFL 285
           N++TDEW+NWKKYPEFQ+ E    +S   ++F NPYDKG L N+++FL
Sbjct: 252 NIKTDEWINWKKYPEFQMKEQPRSDS--EVKFVNPYDKGMLCNIREFL 297

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218192534|gb|EEC74961.1| hypothetical protein OsI_10951 [Oryza sativa Indica Group]

 Score =  223 bits (569), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 112/262 (42%), Positives = 158/262 (60%), Gaps = 25/262 (9%)

Query: 21  IISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIG 80
           + SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV+ S+ + 
Sbjct: 25  LASCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLF 84

Query: 81  GLFNI-------------------------EVAMIIIGLCSIMSKDPGLITNEFPHLDKL 115
            LFNI                         E AM++ GL  I S DPG++T E    ++ 
Sbjct: 85  VLFNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVTYESSFFEEA 144

Query: 116 VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGF 175
                +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF
Sbjct: 145 GCKDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGF 204

Query: 176 LATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV 235
           +  E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+
Sbjct: 205 VVAESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCI 264

Query: 236 CFNVRTDEWVNWKKYPEFQVIE 257
           CFN++TDEW+NWKKYPEFQ+ E
Sbjct: 265 CFNIKTDEWINWKKYPEFQMKE 286

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222624656|gb|EEE58788.1| hypothetical protein OsJ_10323 [Oryza sativa Japonica Group]

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/298 (39%), Positives = 171/298 (57%), Gaps = 37/298 (12%)

Query: 21  IISCILVLLTQLTLSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIG 80
           + SC L LL+QL +++VPR F +   +    ++G+V L V  +  + RR +GV+ S+ + 
Sbjct: 25  LASCGLTLLSQLAVAMVPRLFPSLSLLAMLPVAGVVFLAVIVVGRFWRRFIGVAASAPLF 84

Query: 81  GLFNI-------------------------EVAMIIIGLCSIMSKDPGLITNEFPHLDKL 115
            LFNI                         E AM++ GL  I S DPG++  E    ++ 
Sbjct: 85  VLFNILFLWGVYVFVIRGGTSSLLDMVINAECAMLLFGLYRIFSGDPGIVIYESSFFEEA 144

Query: 116 VEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGF 175
                +     +E   S  RVR+C  CKA+V G+DHHCPAFGNCIGQ N+ LF+ LL GF
Sbjct: 145 GCKDFVEAICPSEKFSSLPRVRHCNCCKANVRGYDHHCPAFGNCIGQKNHRLFMALLTGF 204

Query: 176 LATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV 235
           +  E++Y  CS +++ +  N    +SEN   VN+   TMLFS+LQ+LWQAVF +WHIYC+
Sbjct: 205 VVAESTYTMCSTKYITRCINSGTIRSENPMSVNMVIGTMLFSVLQVLWQAVFLIWHIYCI 264

Query: 236 CFNVRTDEWVNWKKYPEFQVIESE----PGESFTRMRFTNPYDKGFLQNVKDFLSLRR 289
           CFN++TDEW+NWKKYPEFQ+ E      P E   ++R T         NV+ FL +++
Sbjct: 265 CFNIKTDEWINWKKYPEFQMKEQPQSDVPLEKNGQVRRT--------WNVRTFLIMQK 314

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
MGI|MGI:2445110	632	Zdhhc17 "zinc finger, DHHC dom	0.615	0.281	0.290	4.2e-12
UNIPROTKB|J9P6L2	494	ZDHHC17 "Uncharacterized prote	0.615	0.360	0.285	6.8e-12
UNIPROTKB|F1N9E7	601	ZDHHC17 "Uncharacterized prote	0.615	0.296	0.280	6.9e-12
UNIPROTKB|E1BJK1	634	ZDHHC17 "Uncharacterized prote	0.615	0.280	0.285	7.6e-12
UNIPROTKB|F1PRB8	604	ZDHHC17 "Uncharacterized prote	0.615	0.294	0.285	9.8e-12
UNIPROTKB|E9PTT0	622	Zdhhc17 "Protein Zdhhc17" [Rat	0.615	0.286	0.285	1e-11
UNIPROTKB|Q8IUH5	632	ZDHHC17 "Palmitoyltransferase	0.615	0.281	0.285	1.1e-11
RGD|1595790	622	Zdhhc17 "zinc finger, DHHC-typ	0.615	0.286	0.280	3.3e-11
ZFIN|ZDB-GENE-070424-194	620	zdhhc17 "zinc finger, DHHC-typ	0.615	0.287	0.275	1.1e-10
FB|FBgn0259824	637	Hip14 "Huntingtin-interacting	0.626	0.284	0.279	1.1e-10

MGI|MGI:2445110 Zdhhc17 "zinc finger, DHHC domain containing 17" [Mus musculus (taxid:10090)]

 Score = 185 (70.2 bits), Expect = 4.2e-12, P = 4.2e-12
 Identities = 59/203 (29%), Positives = 92/203 (45%)

Query:   101 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 154
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query:   155 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 211
               GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct:   469 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCVSYWGLHCETTYTKDGFWT-YITQIATC 527

Query:   212 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFT 265
             S  +F     S+   LW AV  M  +Y + C  + T+E +N ++Y  F+V         T
Sbjct:   528 SPWMFWMFLNSVFHFLWVAVLLMCQLYQITCLGITTNERMNARRYKHFKV---------T 578

Query:   266 RMRFTNPYDKGFLQNVKDFLSLR 288
                  +P++ G ++N+ DF   R
Sbjct:   579 TTSIESPFNHGCVRNIIDFFEFR 601

GO:0000139 "Golgi membrane" evidence=ISO

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=ISO

GO:0015693 "magnesium ion transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016409 "palmitoyltransferase activity" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IDA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISO

GO:0030660 "Golgi-associated vesicle membrane" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=ISO

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|J9P6L2 ZDHHC17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 182 (69.1 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 58/203 (28%), Positives = 92/203 (45%)

Query:   101 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 154
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   271 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 330

Query:   155 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 211
               GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct:   331 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCETTYTKDGFWT-YITQIATC 389

Query:   212 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFT 265
             S  +F     S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V         T
Sbjct:   390 SPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKV---------T 440

Query:   266 RMRFTNPYDKGFLQNVKDFLSLR 288
                  +P++ G ++N+ DF   R
Sbjct:   441 TTSIESPFNHGCVRNIIDFFEFR 463

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1N9E7 ZDHHC17 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 183 (69.5 bits), Expect = 6.9e-12, P = 6.9e-12
 Identities = 57/203 (28%), Positives = 92/203 (45%)

Query:   101 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 154
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   378 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 437

Query:   155 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 211
               GNC+G  N  YF+  +  + F+     Y  C + +    +          ++  +AT 
Sbjct:   438 WVGNCVGAGNHRYFMGYLFFLLFMICWMIY-GCISYWGFHCETSYAKDGFWTYITQIATC 496

Query:   212 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFT 265
             S  +F     S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V         T
Sbjct:   497 SPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKV---------T 547

Query:   266 RMRFTNPYDKGFLQNVKDFLSLR 288
                  +P++ G ++N+ DF   R
Sbjct:   548 TTSIESPFNHGCIRNIIDFFEFR 570

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IEA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

UNIPROTKB|E1BJK1 ZDHHC17 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 183 (69.5 bits), Expect = 7.6e-12, P = 7.6e-12
 Identities = 58/203 (28%), Positives = 93/203 (45%)

Query:   101 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 154
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   411 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 470

Query:   155 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 211
               GNC+G  N  YF+  +  + F+     Y   S   +    ++ K      ++  +AT 
Sbjct:   471 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCETSYTKDGFWT-YITQIATC 529

Query:   212 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFT 265
             S  +F     S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V         T
Sbjct:   530 SPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKV---------T 580

Query:   266 RMRFTNPYDKGFLQNVKDFLSLR 288
                  +P++ G ++N+ DF   R
Sbjct:   581 TTSIESPFNHGCVRNIIDFFEFR 603

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=IEA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PRB8 ZDHHC17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 182 (69.1 bits), Expect = 9.8e-12, P = 9.8e-12
 Identities = 58/203 (28%), Positives = 92/203 (45%)

Query:   101 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 154
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   381 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 440

Query:   155 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 211
               GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct:   441 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCETTYTKDGFWT-YITQIATC 499

Query:   212 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFT 265
             S  +F     S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V         T
Sbjct:   500 SPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKV---------T 550

Query:   266 RMRFTNPYDKGFLQNVKDFLSLR 288
                  +P++ G ++N+ DF   R
Sbjct:   551 TTSIESPFNHGCVRNIIDFFEFR 573

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=IEA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E9PTT0 Zdhhc17 "Protein Zdhhc17" [Rattus norvegicus (taxid:10116)]

 Score = 182 (69.1 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 58/203 (28%), Positives = 92/203 (45%)

Query:   101 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 154
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   399 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 458

Query:   155 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 211
               GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct:   459 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCVSYWGLHCETTYTKDGFWT-YITQIATC 517

Query:   212 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFT 265
             S  +F     S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V         T
Sbjct:   518 SPWMFWMFLNSVFHFMWVAVLLMCQMYQITCLGITTNERMNARRYKHFKV---------T 568

Query:   266 RMRFTNPYDKGFLQNVKDFLSLR 288
                  +P++ G ++N+ DF   R
Sbjct:   569 TTSIESPFNHGCVRNIIDFFEFR 591

GO:0004871 "signal transducer activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IEA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IEA

GO:0042953 "lipoprotein transport" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

UNIPROTKB|Q8IUH5 ZDHHC17 "Palmitoyltransferase ZDHHC17" [Homo sapiens (taxid:9606)]

 Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 58/203 (28%), Positives = 92/203 (45%)

Query:   101 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 154
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   409 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 468

Query:   155 AFGNCIGQNN--YFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 211
               GNC+G  N  YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct:   469 WVGNCVGAGNHRYFMGYLFFLLFMICWMIYGCISYWGLHCETTYTKDGFWT-YITQIATC 527

Query:   212 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFT 265
             S  +F     S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V         T
Sbjct:   528 SPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKV---------T 578

Query:   266 RMRFTNPYDKGFLQNVKDFLSLR 288
                  +P++ G ++N+ DF   R
Sbjct:   579 TTSIESPFNHGCVRNIIDFFEFR 601

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0018345 "protein palmitoylation" evidence=IEA

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=IDA

GO:0042953 "lipoprotein transport" evidence=IDA

GO:0004871 "signal transducer activity" evidence=IMP

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA

GO:0030660 "Golgi-associated vesicle membrane" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0007165 "signal transduction" evidence=IMP

GO:0015693 "magnesium ion transport" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

RGD|1595790 Zdhhc17 "zinc finger, DHHC-type containing 17" [Rattus norvegicus (taxid:10116)]

 Score = 178 (67.7 bits), Expect = 3.3e-11, P = 3.3e-11
 Identities = 57/203 (28%), Positives = 92/203 (45%)

Query:   101 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 154
             DPG+I   E      +VE +E G +D        L RK VR  +C +C   +  FDHHCP
Sbjct:   399 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP 458

Query:   155 AFGNCI--GQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLAT- 211
               GNC+  G + YF+  +  + F+     Y   S   +     + K      ++  +AT 
Sbjct:   459 WVGNCVCAGNHRYFMGYLFFLLFMICWMIYGCVSYWGLHCETTYTKDGFWT-YITQIATC 517

Query:   212 STMLF-----SILQLLWQAVFFMWHIYCV-CFNVRTDEWVNWKKYPEFQVIESEPGESFT 265
             S  +F     S+   +W AV  M  +Y + C  + T+E +N ++Y  F+V         T
Sbjct:   518 SPWMFWMFLNSVFHFMWVAVLLMCQMYQITCLGITTNERMNARRYKHFKV---------T 568

Query:   266 RMRFTNPYDKGFLQNVKDFLSLR 288
                  +P++ G ++N+ DF   R
Sbjct:   569 TTSIESPFNHGCVRNIIDFFEFR 591

GO:0000139 "Golgi membrane" evidence=ISO

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0007165 "signal transduction" evidence=ISO

GO:0015095 "magnesium ion transmembrane transporter activity" evidence=ISO

GO:0015693 "magnesium ion transport" evidence=ISO

GO:0016409 "palmitoyltransferase activity" evidence=ISO

GO:0018345 "protein palmitoylation" evidence=ISO

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISO

GO:0030660 "Golgi-associated vesicle membrane" evidence=ISO

GO:0042953 "lipoprotein transport" evidence=ISO

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

ZFIN|ZDB-GENE-070424-194 zdhhc17 "zinc finger, DHHC-type containing 17" [Danio rerio (taxid:7955)]

 Score = 174 (66.3 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 56/203 (27%), Positives = 91/203 (44%)

Query:   101 DPGLI-TNEFPHLDKLVEGSELG-VDPDN--ENSLSRKRVR--YCKICKAHVEGFDHHCP 154
             DPG+I  +E      +VE +E G +D        L RK +R  +C +C   +  FDHHCP
Sbjct:   397 DPGIIKASEEQKKKTIVELAETGSLDLSIFCSTCLIRKPIRSKHCAVCNRCIAKFDHHCP 456

Query:   155 AFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWV--VNLAT- 211
               GNC+G  N+  F+  L  FL     ++        +         +  W+    +AT 
Sbjct:   457 WVGNCVGSGNHRYFMGYLF-FLLCMICWMMYGCICYWRIHCATSYTKDGFWIYITQIATC 515

Query:   212 STMLF-----SILQLLWQAVFFMWHIYCVC-FNVRTDEWVNWKKYPEFQVIESEPGESFT 265
             S  +F     S+   +W AV  M  +Y +    + T+E +N ++Y  F+V         T
Sbjct:   516 SPWMFWMFLNSVFHFMWVAVLIMCQLYQIAVLGITTNERMNARRYKHFKV---------T 566

Query:   266 RMRFTNPYDKGFLQNVKDFLSLR 288
                  +P++ G ++N+ DF  LR
Sbjct:   567 ATSIESPFNHGCMRNLIDFFELR 589

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0259824 Hip14 "Huntingtin-interacting protein 14" [Drosophila melanogaster (taxid:7227)]

 Score = 174 (66.3 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 62/222 (27%), Positives = 108/222 (48%)

Query:    87 VAMIIIGLCSIMS--KDPGLI--TNE--FPHLDKLVEGSELGVDPDN--ENSLSRKRVR- 137
             ++ +++ +C + S   DPG+I  T E  F  + +L E   +G +P +     L R+ +R 
Sbjct:   384 ISSLLLWVCFLKSWKGDPGIIRPTREQRFKTIIELSERGGIGFEPASFCSGCLVRRPIRS 443

Query:   138 -YCKICKAHVEGFDHHCPAFGNCIGQNNY-----FLFIVLLV-GFLATEAS--YV-ACSA 187
              +C +C   V  FDHHCP  GNCIG  N+     FL+++L++  ++    S  YV  C+ 
Sbjct:   444 KHCSVCDRCVARFDHHCPWVGNCIGLKNHSYFMGFLWMLLIMCAWMLYGGSKYYVNQCNV 503

Query:   188 QF---VGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIY-CVCFNVRTDE 243
             +F   +G  +      +   WV+  A       +L + W  +  +   Y  +C  + T+E
Sbjct:   504 RFDDFLGAMRAIGNCDAWVGWVMGNA-------LLHMSWVILLTICQTYQVICLGMTTNE 556

Query:   244 WVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFL 285
              +N  +Y  FQ   ++ G S        P+ +G +QN+ DFL
Sbjct:   557 RMNRGRYRHFQ---AKGGHS--------PFTRGPIQNLVDFL 587

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016079 "synaptic vesicle exocytosis" evidence=IMP

GO:0007268 "synaptic transmission" evidence=IMP

GO:0045202 "synapse" evidence=IDA

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0018345 "protein palmitoylation" evidence=ISS

GO:0019706 "protein-cysteine S-palmitoleyltransferase activity" evidence=ISS

GO:0050714 "positive regulation of protein secretion" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_IX001269 hypothetical protein (251 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	289
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	2e-18
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	2e-14

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score = 80.2 bits (198), Expect = 2e-18
 Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 9/164 (5%)

Query: 94  LCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLS-------RK--RVRYCKICKA 144
               +  DPG +       ++  +  E   + D E+ L         K  R  +C++C  
Sbjct: 4   YFKTIFTDPGYVPKNPTEKEQEKQPDEESEEGDEEDELKFCSTCNIIKPPRSHHCRVCNR 63

Query: 145 HVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSEND 204
            V  FDHHCP   NCIG+ N+  F++ L+         +  S  ++       +      
Sbjct: 64  CVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLLVLSFYYLVYLIRNIELFFFLI 123

Query: 205 WVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWK 248
             +  +   ++ S+  LL+ +    +H+Y +  N+ T E++  K
Sbjct: 124 LSLFSSIILLVLSLFFLLFLSFLLFFHLYLILKNITTYEYIKKK 167

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score = 72.1 bits (177), Expect = 2e-14
 Identities = 38/160 (23%), Positives = 59/160 (36%), Gaps = 11/160 (6%)

Query: 135 RVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQF-VGKS 193
           R  +C IC   V  FDHHCP   NC+G  NY  F   L+ +    A  V  S  + +   
Sbjct: 122 RSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLL-YTILVALVVLLSTAYYIAGI 180

Query: 194 QNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDE--WVNW-KKY 250
            +     S     +    S +      +    +  ++ IY +  N+ T E   ++     
Sbjct: 181 FSIRHDTSLAICFLIFGCSLLGVVFFIIT--TLLLLFLIYLILNNLTTIEFIQISRGGST 238

Query: 251 PEFQVIESEPGESFTRMRFT----NPYDKGFLQNVKDFLS 286
            EF  +  E    FT +  +     P D G  QN+     
Sbjct: 239 LEFFPLCRESNLPFTNIFDSSEGALPLDLGIGQNLSTIKG 278

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	289
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	100.0
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	94.28
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	93.95
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	89.48
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	84.57
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	84.05
PF13248	26	zf-ribbon_3: zinc-ribbon domain	82.39

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1e-41  Score=298.09  Aligned_cols=244  Identities=16%  Similarity=0.102  Sum_probs=175.1

Q ss_pred             hhhhcCChhHHHHHHHHHHHHHHHHHHHHhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCcchhhh
Q 022987           37 VPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLV  116 (289)
Q Consensus        37 ~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~DPG~vp~~~~~~~~~~  116 (289)
                      .+|++++-....+-.+.++..+..++-..||.+..+ ..+....+.|.+...+.+++|+.+++++||++|+.+.++....
T Consensus         9 ~rr~~hwGpi~alsiit~i~~~~~~~n~lww~p~ss-~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~~D   87 (414)
T KOG1314|consen    9 FRRFLHWGPITALSIITIITSTTGYMNSLWWFPLSS-FLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENPKD   87 (414)
T ss_pred             hhheeccccHHHHHHHHHHHHHHHHhhhhhhccccc-hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCChh
Confidence            567888766666666667777777776777766432 3345556677777799999999999999999999887643321


Q ss_pred             cCCCCCCCCCCCCCCCCCccccccccCceeeccCccccccccccccchHHHHHHHHHHHHHHHHHH--HHHH------HH
Q 022987          117 EGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASY--VACS------AQ  188 (289)
Q Consensus       117 ~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~wl~nCIG~~N~r~F~~fl~~~~~~~~~~--~~~~------~~  188 (289)
                        +.-..+|..|+.+|+||||||+.||+||.+|||||||+|||||..||.+|..||++..++++-.  +.++      +.
T Consensus        88 --~~~lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~Iy~  165 (414)
T KOG1314|consen   88 --EMFLQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRGIYF  165 (414)
T ss_pred             --HHHHHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHHHHHHHH
Confidence              1235689999999999999999999999999999999999999999999999999988864311  1111      11


Q ss_pred             Hhhh--hccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhHHhhhccCcccch-hccCCCCCccc
Q 022987          189 FVGK--SQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQ-VIESEPGESFT  265 (289)
Q Consensus       189 ~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~h~~li~~n~Tt~E~~~~~r~~~~~-~~~~~~~~~~~  265 (289)
                      .+..  ......+-.....+.+..++.+.+++...+.+++|++.|+..|.+|+|.+|..--+|...-+ ....     +.
T Consensus       166 ~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~wi~~Ka~~rr~~~~~-----d~  240 (414)
T KOG1314|consen  166 RWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESWIVEKAMDRREYYFN-----DD  240 (414)
T ss_pred             HHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhhcc-----CC
Confidence            1111  11111112223344455556667777778889999999999999999999987533322222 1111     22


Q ss_pred             CCCccCCcCHhHHHHHHHhcCCC
Q 022987          266 RMRFTNPYDKGFLQNVKDFLSLR  288 (289)
Q Consensus       266 ~~~~~npyd~G~~~N~~~~~g~~  288 (289)
                      .++..-|||.||+.|++++|..+
T Consensus       241 ~~~f~ypydlgWr~n~r~vf~~~  263 (414)
T KOG1314|consen  241 EGEFTYPYDLGWRINLREVFFQN  263 (414)
T ss_pred             CCceeeeccccccccHHHHhhhc
Confidence            36778999999989999998654

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=8.9e-42  Score=302.39  Aligned_cols=223  Identities=17%  Similarity=0.207  Sum_probs=157.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcch-----hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCcchhhh-------
Q 022987           49 QFALSGLVLLLVQTLCGWCRRLLGV-----SVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDKLV-------  116 (289)
Q Consensus        49 ~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~DPG~vp~~~~~~~~~~-------  116 (289)
                      .+|+.++.+...|.++.+...+-..     ..+.+..++++.+.++..|+|++++++|||.+|.....+.+++       
T Consensus        13 ~~~~~~i~~~~~~~yy~~v~~~c~~~i~~~~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~~~~~   92 (307)
T KOG1315|consen   13 WIPVLIILLVIGWTYYVYVAVLCILSISLTIPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSLENGS   92 (307)
T ss_pred             chhheeeeeeEEEEEEEeehhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccCCCcCccccccccC
Confidence            3555555555555444443332222     2345677888999999999999999999999997653221110       


Q ss_pred             -----------cCCCCCCCCCCCCCCCCCccccccccCceeeccCccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 022987          117 -----------EGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVAC  185 (289)
Q Consensus       117 -----------~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~wl~nCIG~~N~r~F~~fl~~~~~~~~~~~~~  185 (289)
                                 +.+...++|.+|+.+||+|||||++|++||+||||||||+|||||.+|||+|++|+++..+.+.+....
T Consensus        93 ~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~~lv~  172 (307)
T KOG1315|consen   93 DNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIYVLVT  172 (307)
T ss_pred             cccccceeeEecCCCCceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHHHHHHHHH
Confidence                       112246789999999999999999999999999999999999999999999999999999888665554


Q ss_pred             HHHHhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhHHhhhccCcccchhccCCCCCccc
Q 022987          186 SAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFT  265 (289)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~h~~li~~n~Tt~E~~~~~r~~~~~~~~~~~~~~~~  265 (289)
                      ........... . ....+.......+.++.+...++.+++++++|++||++|+||+|..+......             
T Consensus       173 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~~~~~~~~-------------  237 (307)
T KOG1315|consen  173 TLIGFTKYFQG-G-AGPSSLLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAYKSPVFRS-------------  237 (307)
T ss_pred             HHHHHHHHHhc-c-ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhccccccc-------------
Confidence            43333333211 1 22222223334455666777778888899999999999999999986432221             


Q ss_pred             CCCccCCcCHhHHHHHHHhcCCC
Q 022987          266 RMRFTNPYDKGFLQNVKDFLSLR  288 (289)
Q Consensus       266 ~~~~~npyd~G~~~N~~~~~g~~  288 (289)
                      +....|.++.  ..|++++||.+
T Consensus       238 ~~~~~~~~~~--~~n~~~vfg~~  258 (307)
T KOG1315|consen  238 GLHNKNGFNL--YVNFREVFGSN  258 (307)
T ss_pred             cccccCCcce--eecHHHHhCCC
Confidence            1233556665  77999999875

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=4.4e-41  Score=303.58  Aligned_cols=186  Identities=24%  Similarity=0.295  Sum_probs=131.6

Q ss_pred             HHHHHHHHHHHh---cCCCccCCCC--Ccchh-hh---------cCCCCCCCCCCCCCCCCCccccccccCceeeccCcc
Q 022987           88 AMIIIGLCSIMS---KDPGLITNEF--PHLDK-LV---------EGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHH  152 (289)
Q Consensus        88 ~~~~~~~~~~~~---~DPG~vp~~~--~~~~~-~~---------~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHH  152 (289)
                      ...+.....+..   +|||.+|++.  +.+.. ..         ..+...++|.+|+.+||+|||||++||+||.|||||
T Consensus        64 ~~~~~~~~~~~~~~~sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHH  143 (299)
T KOG1311|consen   64 LLNILNLMLACFRMLSDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHH  143 (299)
T ss_pred             HHHHHHHHHHHhcccCCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhcccccccCCC
Confidence            333444444333   5999999952  21111 00         111236789999999999999999999999999999


Q ss_pred             ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hccCCCCCC--CCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 022987          153 CPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGK-SQNFDKSQS--ENDWVVNLATSTMLFSILQLLWQAVFFM  229 (289)
Q Consensus       153 C~wl~nCIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~ll~  229 (289)
                      |||+|||||++|||+|+.|+++..+++++........+.. .........  ..+......+...+++++..+.++.|+.
T Consensus       144 C~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~  223 (299)
T KOG1311|consen  144 CPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNLTPVLIPAGTFLSALLGLLSALFLAFTSALLC  223 (299)
T ss_pred             CCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999997777666554443333322 221111111  2223333444555778888888999999


Q ss_pred             HHHHHHHhCchhHHhhhccCcccchhccCCCCCcccCCCccCCcCHhHHHHHHHhcCCCC
Q 022987          230 WHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR  289 (289)
Q Consensus       230 ~h~~li~~n~Tt~E~~~~~r~~~~~~~~~~~~~~~~~~~~~npyd~G~~~N~~~~~g~~r  289 (289)
                      +|++++.+|+||+|.++.   ..             .....+|||+|.++|+++++|.++
T Consensus       224 fh~~li~~~~Tt~e~~~~---~~-------------~~~~~~~~~~g~~~n~~~~~~~~~  267 (299)
T KOG1311|consen  224 FHIYLIKSGSTTYESIKS---LD-------------FVSRSNPYDLGLLKNLQEVFGGPL  267 (299)
T ss_pred             hheeeEecCcchhhhhhc---cc-------------cccccCCCchhHHHHHHHHhCCCC
Confidence            999999999999999864   00             011269999999999999999864

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=1.9e-40  Score=276.73  Aligned_cols=156  Identities=19%  Similarity=0.287  Sum_probs=119.1

Q ss_pred             HHHHHHHhcCCCccCCCCCcc----------------hhhhcCCCCCCCCCCCCCCCCCccccccccCceeeccCccccc
Q 022987           92 IGLCSIMSKDPGLITNEFPHL----------------DKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPA  155 (289)
Q Consensus        92 ~~~~~~~~~DPG~vp~~~~~~----------------~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~w  155 (289)
                      ++|+++.++|||++|+..+++                .+..+.+...++|.+|+..||+|||||+.||+||.||||||+|
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w   81 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW   81 (174)
T ss_pred             EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence            578899999999999981100                0011223357789999999999999999999999999999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022987          156 FGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVNLATSTMLFSILQLLWQAVFFMWHIYCV  235 (289)
Q Consensus       156 l~nCIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ll~~h~~li  235 (289)
                      +|||||++|||+|++|+++..+..++........+....................++.++++++..++++.++++|++++
T Consensus        82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  161 (174)
T PF01529_consen   82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIFSNFSSIFLLIISIFFFIFVGFLLIFQLYLI  161 (174)
T ss_pred             hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999988777766555555443332222111111111124556778888899999999999999


Q ss_pred             HhCchhHHhhhc
Q 022987          236 CFNVRTDEWVNW  247 (289)
Q Consensus       236 ~~n~Tt~E~~~~  247 (289)
                      ++|+||+|.+|+
T Consensus       162 ~~n~Tt~E~~~~  173 (174)
T PF01529_consen  162 LRNITTYERIKR  173 (174)
T ss_pred             HcCCcHHHHHHc
Confidence            999999999974

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=2.4e-37  Score=262.85  Aligned_cols=180  Identities=19%  Similarity=0.230  Sum_probs=128.1

Q ss_pred             HHHHHHHHHHHHhcCCCccCCCCCcchhhhcCCCCCCCCCCCCCCCCCccccccccCceeeccCccccccccccccchHH
Q 022987           87 VAMIIIGLCSIMSKDPGLITNEFPHLDKLVEGSELGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYF  166 (289)
Q Consensus        87 ~~~~~~~~~~~~~~DPG~vp~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~wl~nCIG~~N~r  166 (289)
                      ...+++.|+++....|  +  ..+.       .....+|.+|..+||||+|||+.||+||++|||||||+|||||..|||
T Consensus        78 l~nvi~hy~ka~t~pP--v--gn~~-------~~~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHr  146 (309)
T KOG1313|consen   78 LSNVIFHYYKARTKPP--V--GNPG-------LENDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHR  146 (309)
T ss_pred             HHHHHHhheeecccCC--c--CCCC-------CccccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccch
Confidence            3445566777765554  1  1111       113568999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhh-hccCC-------CCCC-CCchH---------HHHHHHHHHHHHHHHHHHHHHH
Q 022987          167 LFIVLLVGFLATEASYVACSAQFVGK-SQNFD-------KSQS-ENDWV---------VNLATSTMLFSILQLLWQAVFF  228 (289)
Q Consensus       167 ~F~~fl~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~-~~~~~---------~~~~i~~~~~~~~~~~~~~~ll  228 (289)
                      ||++|++++.+++.+..+.....+.+ .....       +... ..|..         ..-+....+.+....+.++.+.
T Consensus       147 yFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~tay~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~  226 (309)
T KOG1313|consen  147 YFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEITAYASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLLT  226 (309)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhcccccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999988766553333332 22111       1001 11111         1112335566777778899999


Q ss_pred             HHHHHHHHhCchhHHhhhcc--CcccchhccCCCCCcccCCCccCCcCHhHHHHHHHhcCCCC
Q 022987          229 MWHIYCVCFNVRTDEWVNWK--KYPEFQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLSLRR  289 (289)
Q Consensus       229 ~~h~~li~~n~Tt~E~~~~~--r~~~~~~~~~~~~~~~~~~~~~npyd~G~~~N~~~~~g~~r  289 (289)
                      .+|.++|.+|.|++|+....  |.+++.            +...||++.|..+|||.++|-.|
T Consensus       227 ~W~~vlI~~G~tsi~~~~~~~e~k~~~a------------~~R~~~~n~g~k~nWr~fLg~~~  277 (309)
T KOG1313|consen  227 AWHAVLISRGETSIEQLINIKERKRYLA------------HLRSNPTNFGGKANWRNFLGLFR  277 (309)
T ss_pred             HHhheeeehhhhhHHHHHHHHHhHhHHH------------hccCCCcccchHHHHHHhhcccc
Confidence            99999999999999987532  222222            12389999999999999998765

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=2.5e-35  Score=264.70  Aligned_cols=211  Identities=19%  Similarity=0.276  Sum_probs=145.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCcch-----h---hhcCCCCCCCCCCCCCCCCCccccccccCcee
Q 022987           75 VSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLD-----K---LVEGSELGVDPDNENSLSRKRVRYCKICKAHV  146 (289)
Q Consensus        75 ~~~~~~~~~~~l~~~~~~~~~~~~~~DPG~vp~~~~~~~-----~---~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV  146 (289)
                      ..+...+.+.+...+...++++...+|||..+++.....     +   +.+....+++|.+|+.+||+|||||+.||+||
T Consensus        54 ~~~~~~i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV  133 (309)
T COG5273          54 LVVLFIILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCV  133 (309)
T ss_pred             chhhhhhhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCccccceeccccccccCCCCccchhhcchh
Confidence            345566667777788889999999999999985532111     1   12233458899999999999999999999999


Q ss_pred             eccCccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCchHHH-HHHHHHHHHHHHHHHHH
Q 022987          147 EGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQSENDWVVN-LATSTMLFSILQLLWQA  225 (289)
Q Consensus       147 ~r~DHHC~wl~nCIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~  225 (289)
                      +||||||||+|||||.+|||+|++|+++....+...+.....++.......   ........ ++.....++....+.+.
T Consensus       134 ~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~~~~~~~~f~~~~  210 (309)
T COG5273         134 LKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIR---HDTSLAICFLIFGCSLLGVVFFIITT  210 (309)
T ss_pred             hccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---CChHHHHHHHHHhhhHHHHHHHHHHH
Confidence            999999999999999999999999999987776666555444444433211   11111111 22222344555566777


Q ss_pred             HHHHHHHHHHHhCchhHHhhhccCcccchhccC---CC----CCcccCCCccCCcCHhHHHHHHHhcCCC
Q 022987          226 VFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIES---EP----GESFTRMRFTNPYDKGFLQNVKDFLSLR  288 (289)
Q Consensus       226 ~ll~~h~~li~~n~Tt~E~~~~~r~~~~~~~~~---~~----~~~~~~~~~~npyd~G~~~N~~~~~g~~  288 (289)
                      .++.++.+++..|+|+.|..+..|..+.-....   ..    ....+..+..+|++.|.-+|+..+++.+
T Consensus       211 ~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~i~~~~  280 (309)
T COG5273         211 LLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPLCRESNLPFTNIFDSSEGALPLDLGIGQNLSTIKGSN  280 (309)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhccceecccccchhccCCcCceeccCCCccccccccCccccceeecCCC
Confidence            889999999999999999987555444322111   00    0111122356788888888888777653

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=100.00  E-value=2.1e-34  Score=270.02  Aligned_cols=237  Identities=22%  Similarity=0.308  Sum_probs=168.0

Q ss_pred             hhhhhhhcCChhHHHHHHHHHHHHHHHHHHHHhhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCcch
Q 022987           34 LSLVPRFFAASPFIVQFALSGLVLLLVQTLCGWCRRLLGVSVSSLIGGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLD  113 (289)
Q Consensus        34 ~~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~DPG~vp~~~~~~~  113 (289)
                      .....|.+..+.....+|.+++..+.+|.++.|.. ...+...+.....+.+..+..++++++...+|||++|.+.+...
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~fw~~~~w~~-~i~~~~~~~~~~~~i~~~l~~~~~f~~~~rsDPg~i~~~~~~~~  404 (600)
T KOG0509|consen  326 CLCATRKIVGFLLRPPLLSGFFLSTLFWFYYFWFS-KITPYTLFDFHYCFIISVLAYFITFGLFLRSDPGFIPTSTEVGR  404 (600)
T ss_pred             eeccchhhccccccchhHHHHHHHHHHHHHHhhhe-eccchhhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCchhhHH
Confidence            34456677777778889999999999999999988 44444445455555555566777888888899999998776443


Q ss_pred             hh-----h-cCCCCC-CCCCCCCCCCCCccccccccCceeeccCccccccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 022987          114 KL-----V-EGSELG-VDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACS  186 (289)
Q Consensus       114 ~~-----~-~~~~~~-~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~wl~nCIG~~N~r~F~~fl~~~~~~~~~~~~~~  186 (289)
                      +.     + .+-..+ ++|.+|.++||.|||||++||+||.||||||||++||||.+|||+|+.|++.....+.+++...
T Consensus       405 ~tIs~l~d~gkf~~en~FC~~clirKp~rSkhc~vcnrcVarfDHhCPwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~  484 (600)
T KOG0509|consen  405 ETISQLIDFGKFDLENRFCLTCLIRKPLRSKHCSVCNRCVARFDHHCPWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLC  484 (600)
T ss_pred             HHHHHhhccccccccccceeeeeeecCCccchhhhhHHHHhccccCCCccccccCccchHHHHHHHHHHHHHHHHHHHHH
Confidence            21     1 111224 6999999999999999999999999999999999999999999999999999888877777665


Q ss_pred             HHHhhhhccCCCCCCCCchHHHHHHHHHHHHH-------------HHHHHHHHHH-HHHHHHHHhCchhHHhhhccCccc
Q 022987          187 AQFVGKSQNFDKSQSENDWVVNLATSTMLFSI-------------LQLLWQAVFF-MWHIYCVCFNVRTDEWVNWKKYPE  252 (289)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~ll-~~h~~li~~n~Tt~E~~~~~r~~~  252 (289)
                      ..++.......     ..+...+. ....+..             +.-.|..... ..|-..++.+.||+|.++.+|+++
T Consensus       485 ~~y~~~~~~~~-----~~~~~~l~-~~~~~~~~~~~~~~~~~n~~~~~t~~~~~~~~~~~~~~c~~~tt~e~~n~~r~~~  558 (600)
T KOG0509|consen  485 LYYIMNLENAS-----TIYVGFLI-AVQAFRIPKPVTGNLLGNEDLNPTWGSTSTKCQHYNCACLHLTTNEQINVKRYEH  558 (600)
T ss_pred             HHHHhhcchhH-----HHHHHHHH-HHHHHhCCccceeeeeeccccccccccccccccccceeeecccHHHHHHHHHhhc
Confidence            55554322211     00111110 0000000             0001222222 233446799999999999999998


Q ss_pred             chhccCCCCCcccCCCccCCcCHhHHHHHHHhcC
Q 022987          253 FQVIESEPGESFTRMRFTNPYDKGFLQNVKDFLS  286 (289)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~npyd~G~~~N~~~~~g  286 (289)
                      ++.+         +....+|++.|+.+|+.+|+-
T Consensus       559 ~~~~---------~~~~~~~~s~g~~~Nl~df~~  583 (600)
T KOG0509|consen  559 LGIK---------RGPTRSPFSPGPIRNLVDFFL  583 (600)
T ss_pred             cccc---------cCcCCCCCCchhhhcchheee
Confidence            8754         335689999999999999984

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=4.7e-33  Score=237.82  Aligned_cols=272  Identities=18%  Similarity=0.206  Sum_probs=145.6

Q ss_pred             hhhcccccchhhhHHHHHHHHHHHHHHhhhhhhh-----cCChhHHHHHHHHHHHHHHHHHHHHhhh--hhcchhhHHHH
Q 022987            7 QRKLSASLPLICRCIISCILVLLTQLTLSLVPRF-----FAASPFIVQFALSGLVLLLVQTLCGWCR--RLLGVSVSSLI   79 (289)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   79 (289)
                      |.++=+..|...+...+|++....+..++...|.     ..+++....+....++.+    .+.|..  .-.+...+...
T Consensus        25 q~p~lKgt~~w~~~ff~~~ip~~llr~v~~y~~sl~~~~l~~tni~L~lvy~a~m~~----~~~~esfiy~~~l~lsl~~  100 (341)
T KOG1312|consen   25 QTPSLKGTARWGAQFFSCIIPECLLRAVHGYLRSLLFHTLNHTNIVLHLVYQAMMYT----EYTWESFIYCQELELSLHY  100 (341)
T ss_pred             CCcccccccccceeeEEECccHHHHHHHHHHHHHheeeeccCCChhHHHHHHHHHhh----hhhheeeEeccchhhhHHH
Confidence            4444444444444555566665556555544432     224444443333333332    222211  11122223222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCccCCCCCcchh--hh--cCCC-CCCCCCCCCCCCCCccccccccCceeeccCcccc
Q 022987           80 GGLFNIEVAMIIIGLCSIMSKDPGLITNEFPHLDK--LV--EGSE-LGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCP  154 (289)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~DPG~vp~~~~~~~~--~~--~~~~-~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~  154 (289)
                      .+.-..+.++-.++++.++.+|||.+.++......  ..  +.-+ ....|+||+.+||.|||||++||+||.||||||.
T Consensus       101 ~il~~l~vivp~i~f~ltc~snpg~i~k~n~s~~~~~ypYDy~if~k~~kCSTCki~KPARSKHCsiCNrCV~rfDHHCi  180 (341)
T KOG1312|consen  101 LILPYLLVIVPLIFFTLTCGSNPGIITKANESLFLHVYPYDYVIFPKNVKCSTCKIRKPARSKHCSICNRCVHRFDHHCI  180 (341)
T ss_pred             HHHHHHHHHHHHHHHhhhhcCCCCccchhhhccceeccCccceeecCCCccccccCCCccccccchHHHHHHHHhccceE
Confidence            23333333455667888899999999886543211  11  1111 2378999999999999999999999999999999


Q ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhccCCC------CCCCCchHHHHHHHHHHHH---------
Q 022987          155 AFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVG--KSQNFDK------SQSENDWVVNLATSTMLFS---------  217 (289)
Q Consensus       155 wl~nCIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~~~i~~~~~~---------  217 (289)
                      |+|||||++|.|||++|+++...+.. +......++.  ......+      ..-...-+...++-.++.+         
T Consensus       181 WiNNCIG~~N~ryF~lFLL~~i~l~~-yaivrlgfi~ln~~sdl~q~v~ilt~~~g~~ks~~~L~~yl~la~~~~v~~l~  259 (341)
T KOG1312|consen  181 WINNCIGAWNIRYFLLFLLTLISLAT-YAIVRLGFIVLNVMSDLYQEVYILTLGHGHVKSTVFLIQYLFLAFPRIVFMLG  259 (341)
T ss_pred             eeecccccchHHHHHHHHHHHHHHHH-HHHHHHHheehhhccccchheeeeeeeecchhhHHHHHHHHHHHhccceeeee
Confidence            99999999999999999998854433 3333333331  1000000      0000000011111111111         


Q ss_pred             HHH-HHHHHHHHHHHHHHHHhCchhHHhhhccCcccchhccCCCCCccc------------CCCccCCcCHh-HHHHHHH
Q 022987          218 ILQ-LLWQAVFFMWHIYCVCFNVRTDEWVNWKKYPEFQVIESEPGESFT------------RMRFTNPYDKG-FLQNVKD  283 (289)
Q Consensus       218 ~~~-~~~~~~ll~~h~~li~~n~Tt~E~~~~~r~~~~~~~~~~~~~~~~------------~~~~~npyd~G-~~~N~~~  283 (289)
                      ... .-+++..+.+-.|+-..|+|+.|+.+.+....++.....-+....            +.+-+|-||.| ...|.++
T Consensus       260 ~~~~~~~~~~Y~~f~~y~~~t~~~~~~W~~~d~a~~~~~~~v~~~~~A~d~~h~N~~~~~t~S~i~nIyd~g~f~~n~~~  339 (341)
T KOG1312|consen  260 FVVVLSFLGGYLLFVLYLAATNQTTNEWYRGDWAWCQRCPLVAWPPSAEDQVHRNIHSHGTRSNIQNIYDPGFFCHNRKK  339 (341)
T ss_pred             hhhhhhHhHHHHHHHHHHHhccCCchhhhccchHhhhcCcccccCCccccchhcccceeeehhhchhhccCcccchhhhc
Confidence            111 123455666777888999999999876444333322211111111            12335777777 6666654

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=94.28  E-value=0.12  Score=46.68  Aligned_cols=28  Identities=25%  Similarity=0.618  Sum_probs=15.5

Q ss_pred             cccccccCceeeccCccccccccccccc
Q 022987          136 VRYCKICKAHVEGFDHHCPAFGNCIGQN  163 (289)
Q Consensus       136 s~HC~~C~~CV~r~DHHC~wl~nCIG~~  163 (289)
                      .++|..|+..+..+-|||..-|+||-+.
T Consensus       113 ~~~C~~C~~~rPpRs~HCsvC~~CV~rf  140 (299)
T KOG1311|consen  113 WKYCDTCQLYRPPRSSHCSVCNNCVLRF  140 (299)
T ss_pred             eEEcCcCcccCCCCcccchhhccccccc
Confidence            4555555555555555555555555444

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.95  E-value=1  Score=36.92  Aligned_cols=50  Identities=12%  Similarity=0.048  Sum_probs=37.3

Q ss_pred             CCCCCCCCCCCCCCccccccccCceeeccCccccccccccccchHHHHHHHHHHHHHHHHH
Q 022987          121 LGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEAS  181 (289)
Q Consensus       121 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~wl~nCIG~~N~r~F~~fl~~~~~~~~~  181 (289)
                      ....|..|+.-...+-|||..-|.||.+.-|           +.+-.|+.+.....+....
T Consensus        61 Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~-----------~~F~~fl~~~~~~~~~~~~  110 (174)
T PF01529_consen   61 RSHHCRVCNRCVLRFDHHCPWLGNCIGRRNH-----------RYFLLFLLYLCLYCLYFFI  110 (174)
T ss_pred             cceeccccccccccccccchhhccccccccH-----------HHHHHHHHHHHHHHHHHHH
Confidence            4567999999999999999999999998766           4555777666644444333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=89.48  E-value=2.3  Score=38.70  Aligned_cols=120  Identities=10%  Similarity=-0.072  Sum_probs=73.2

Q ss_pred             CCCCCCCCCCCCCCccccccccCceeeccCccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCC
Q 022987          121 LGVDPDNENSLSRKRVRYCKICKAHVEGFDHHCPAFGNCIGQNNYFLFIVLLVGFLATEASYVACSAQFVGKSQNFDKSQ  200 (289)
Q Consensus       121 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~wl~nCIG~~N~r~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (289)
                      ....|..|+.=....-|||..=|+||.+..|           +=.-.|+.++...++..+....................
T Consensus       122 RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~-----------r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (309)
T COG5273         122 RSHHCSICNRCVLKFDHHCPWINNCVGFRNY-----------RFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTSLA  190 (309)
T ss_pred             CCccchhhcchhhccCccCcccccccCcchH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChHHH
Confidence            4567999999999999999999999998654           66778888886555554433332222222111111111


Q ss_pred             -----CCCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhHHhhhccCcc
Q 022987          201 -----SENDWVVN--LATSTMLFSILQLLWQAVFFMWHIYCVCFNVRTDEWVNWKKYP  251 (289)
Q Consensus       201 -----~~~~~~~~--~~i~~~~~~~~~~~~~~~ll~~h~~li~~n~Tt~E~~~~~r~~  251 (289)
                           ...+....  +++..+++......+.......+.+.+.++.++-|...-.|.+
T Consensus       191 ~~~li~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~  248 (309)
T COG5273         191 ICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPLCRES  248 (309)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccceecccccchhccC
Confidence                 00111111  2222333344444566677888889999999999987655544

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=84.57  E-value=0.51  Score=30.13  Aligned_cols=24  Identities=17%  Similarity=0.052  Sum_probs=21.9

Q ss_pred             CCCCCCCCCCCCCCccccccccCc
Q 022987          121 LGVDPDNENSLSRKRVRYCKICKA  144 (289)
Q Consensus       121 ~~~~C~~C~~~kP~Rs~HC~~C~~  144 (289)
                      ...+|..|...-|+|+..|+.||.
T Consensus        13 ~k~ICrkC~ARnp~~A~~CRKCg~   36 (48)
T PRK04136         13 NKKICMRCNARNPWRATKCRKCGY   36 (48)
T ss_pred             cccchhcccCCCCccccccccCCC
Confidence            467899999999999999999886

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=84.05  E-value=0.7  Score=24.85  Aligned_cols=21  Identities=14%  Similarity=0.298  Sum_probs=18.3

Q ss_pred             CCCCCCCCCCCccccccccCc
Q 022987          124 DPDNENSLSRKRVRYCKICKA  144 (289)
Q Consensus       124 ~C~~C~~~kP~Rs~HC~~C~~  144 (289)
                      +|+.|...-++.++.|+.||.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            588999989999999999875

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=82.39  E-value=0.92  Score=25.08  Aligned_cols=23  Identities=17%  Similarity=0.260  Sum_probs=19.3

Q ss_pred             CCCCCCCCCCCCCccccccccCc
Q 022987          122 GVDPDNENSLSRKRVRYCKICKA  144 (289)
Q Consensus       122 ~~~C~~C~~~kP~Rs~HC~~C~~  144 (289)
                      ...|+.|....++.++.|+.||.
T Consensus         2 ~~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    2 EMFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             cCCCcccCCcCCcccccChhhCC
Confidence            45799999988889999998875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	289
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	85.29
d2dkta2	56	RING finger and CHY zinc finger domain-containing	80.26

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=85.29  E-value=0.17  Score=30.78  Aligned_cols=24  Identities=21%  Similarity=0.329  Sum_probs=21.5

Q ss_pred             CCCCCCCCCCCCCCccccccccCc
Q 022987          121 LGVDPDNENSLSRKRVRYCKICKA  144 (289)
Q Consensus       121 ~~~~C~~C~~~kP~Rs~HC~~C~~  144 (289)
                      ...+|..|..+-|+|+..|+.|+.
T Consensus        18 ~k~ICrkC~AR~p~rAt~CRKCg~   41 (56)
T d2ayja1          18 LKKVCRKCGALNPIRATKCRRCHS   41 (56)
T ss_dssp             CCEEETTTCCEECTTCSSCTTTCC
T ss_pred             hhHHHhhccccCCccccccccCCC
Confidence            467899999999999999998875

>d2dkta2 g.93.1.1 (A:82-137) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Zinc hairpin stack
superfamily: Zinc hairpin stack
family: Zinc hairpin stack
domain: RING finger and CHY zinc finger domain-containing protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.26  E-value=0.26  Score=30.20  Aligned_cols=25  Identities=8%  Similarity=0.032  Sum_probs=17.9

Q ss_pred             CCCCCCCCCCCccccccccCceeec
Q 022987          124 DPDNENSLSRKRVRYCKICKAHVEG  148 (289)
Q Consensus       124 ~C~~C~~~kP~Rs~HC~~C~~CV~r  148 (289)
                      .|..|++-....-.||..|+.|+..
T Consensus        22 ~CgiCRvG~~~~ffHC~~C~~C~~~   46 (56)
T d2dkta2          22 SCGICRIGPKEDFFHCLKCNLCLTT   46 (56)
T ss_dssp             TTTEEEESCGGGEEEETTTTEEEEG
T ss_pred             CCCceeecCCccccccCccccccCc
Confidence            3556666666777888888888755