Citrus Sinensis ID: 023007

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW
Secondary Structure (PSIPRED)
ccccccHHHHHHHHcccccccccHHHHccccHHHHHHccccccccccccEEEEcccccccccEEEEEEccccccccEEEEEEEEEccccccHHHHHccccccccccccccccEEEEEEEEcccccccccccEEEEccccccccccEEEcccccEEEccccccHHHHHcccccHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHccccEEEccccccHHHHHHHHcccccccEEEEccccHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHcHHHHEEEEEEcccccHHEEEEEEEccccccccEEEEEEEEEEccHHHHHHHHccccccccccEccccccEEEEEEEcccccccccccEEEEccccccccEcEEEEcHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHccEEEEEEcccccHHHHHHHHHHHcccEEEEHHHHcHHHHHHHHHcccccEEEEEcccccHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFsalmsppskavvyeregppdsvikmielppvevkeNDVCVKMLaapinpsdinriegvypvrpkvpavggyegvgEVYSVGsavtrlapgdwvipsppssgtwqsyvvkdqsvwhkvskdspmEYAATIIVNPLTALRMledfttlnsgdsivqngatsIVGQCIIQIARHRGIHSINIirdragsdEAKEKLKglgadevfteSQLEVKNVKGllanlpepalgfncvggnsASKVLKFLRFREEQW
Flexible Loop (DISEMBL)
MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFsalmsppskavvyeregppdsvIKMIELPPVEVKENDVCVKMLAapinpsdinriegvypvRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHkvskdspmeYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGlgadevftesQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW
Low Complexity Region (SEG)
MALARSVAVKLINRSISAASIFSLEWagarrvqaqrvraFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPavggyegvgevysvgsavTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW
Disordered region (IsUnstruct)
******VAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSAL********V*********VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD**************GADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF*****
Disordered Region (DISOPRED)
************************************************KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQ*
Disordered Region (DISEMBL)
MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW
Disordered Region (DISPRO)
******V*VKLINRSISAAS*FS*EWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooohhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	288	2.2.26 [Sep-21-2011]
Q8LCU7	375	Probable trans-2-enoyl-Co	yes	no	0.854	0.656	0.800	1e-118
Q9Z311	373	Trans-2-enoyl-CoA reducta	yes	no	0.864	0.667	0.484	2e-60
Q9DCS3	373	Trans-2-enoyl-CoA reducta	yes	no	0.940	0.726	0.44	1e-58
Q9BV79	373	Trans-2-enoyl-CoA reducta	yes	no	0.809	0.624	0.476	6e-57
Q7YS70	373	Trans-2-enoyl-CoA reducta	yes	no	0.809	0.624	0.476	1e-55
Q6GQN8	377	Trans-2-enoyl-CoA reducta	yes	no	0.809	0.618	0.454	1e-52
Q28GQ2	350	Trans-2-enoyl-CoA reducta	no	no	0.871	0.717	0.445	8e-52
Q9V6U9	357	Probable trans-2-enoyl-Co	yes	no	0.871	0.703	0.448	4e-51
O45903	344	Probable trans-2-enoyl-Co	yes	no	0.756	0.633	0.439	4e-46
Q54YT4	350	Trans-2-enoyl-CoA reducta	yes	no	0.829	0.682	0.407	4e-43

>sp|Q8LCU7|MECR_ARATH Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Arabidopsis thaliana GN=At3g45770 PE=1 SV=1

 Score =  424 bits (1090), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 197/246 (80%), Positives = 223/246 (90%)

Query: 37  VRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE 96
           +++FS +MSPPSKA+VYE  G PDSV +++ LPPVEVKENDVCVKM+AAPINPSDINRIE
Sbjct: 34  IKSFSTIMSPPSKAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIE 93

Query: 97  GVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
           GVYPVRP VPAVGGYEGVGEVY+VGS V   +PGDWVIPSPPSSGTWQ+YVVK++SVWHK
Sbjct: 94  GVYPVRPPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHK 153

Query: 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216
           + K+ PMEYAATI VNPLTALRMLEDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +
Sbjct: 154 IDKECPMEYAATITVNPLTALRMLEDFVNLNSGDSVVQNGATSIVGQCVIQLARLRGIST 213

Query: 217 INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASK 276
           IN+IRDRAGSDEA+E+LK LGADEVF+ESQL VKNVK LL NLPEPALGFNCVGGN+AS 
Sbjct: 214 INLIRDRAGSDEAREQLKALGADEVFSESQLNVKNVKSLLGNLPEPALGFNCVGGNAASL 273

Query: 277 VLKFLR 282
           VLK+LR
Sbjct: 274 VLKYLR 279

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 8

>sp|Q9Z311|MECR_RAT Trans-2-enoyl-CoA reductase, mitochondrial OS=Rattus norvegicus GN=Mecr PE=2 SV=1

 Score =  232 bits (592), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 121/250 (48%), Positives = 163/250 (65%), Gaps = 1/250 (0%)

Query: 33  QAQRVRAFSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSD 91
           Q +   ++SA   P   +A+VY   G P  VI++  L    V+ +DV VKMLAAPINPSD
Sbjct: 27  QGRTTSSYSAFSEPSHVRALVYGNHGDPAKVIQLKNLELTAVEGSDVHVKMLAAPINPSD 86

Query: 92  INRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQ 151
           IN I+G Y + PK+PAVGG EGVG+V +VGS+V+ L PGDWVIP+    GTW++  V  +
Sbjct: 87  INMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSGLKPGDWVIPANAGLGTWRTEAVFSE 146

Query: 152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARH 211
                V KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA  
Sbjct: 147 EALIGVPKDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASA 206

Query: 212 RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 271
            G+ +IN+IRDR    +  ++LK LGAD V TE +L +   K +  +LP P L  NCVGG
Sbjct: 207 LGLKTINVIRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKNIFKDLPLPRLALNCVGG 266

Query: 272 NSASKVLKFL 281
            S++++L+ L
Sbjct: 267 KSSTELLRHL 276

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA with chain length from C6 to C16 in an NADPH-dependent manner with preference to medium chain length substrate. May have a role in the mitochondrial synthesis of fatty acids.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q9DCS3|MECR_MOUSE Trans-2-enoyl-CoA reductase, mitochondrial OS=Mus musculus GN=Mecr PE=2 SV=2

 Score =  226 bits (576), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 121/275 (44%), Positives = 174/275 (63%), Gaps = 4/275 (1%)

Query: 11  LINRSISAASIFSLEWAG---ARRVQAQRVRAFSALMSPPS-KAVVYEREGPPDSVIKMI 66
           L+++ ++ A   + + AG   A     +   ++SAL  P   +A+VY   G P  V+++ 
Sbjct: 2   LVSQRVTGARARAPQLAGLLEAWYRHGRTTSSYSALSEPSRVRALVYGNHGDPAKVVQLK 61

Query: 67  ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR 126
            L    V+ +DV V+MLAAPINPSDIN I+G Y + PK+PAVGG EGVG+V +VGS+V+ 
Sbjct: 62  NLELTAVEGSDVHVRMLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSA 121

Query: 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL 186
           L PGDWVIP+    GTW++  V  +     + KD P++ AAT+ VNP TA RML DF  L
Sbjct: 122 LKPGDWVIPANAGLGTWRTEAVFSEEALIGIPKDIPLQSAATLGVNPCTAYRMLVDFEQL 181

Query: 187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246
             GDS++QN + S VGQ +IQIA    + +IN++RDR    +  ++LK LGAD V TE +
Sbjct: 182 QPGDSVIQNASNSGVGQAVIQIASALRLKTINVVRDRPDIKKLTDRLKDLGADYVLTEEE 241

Query: 247 LEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
           L +   K +  +LP P L  NCVGG S++++L+ L
Sbjct: 242 LRMPETKTIFKDLPLPRLALNCVGGKSSTELLRHL 276

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA with chain length from C6 to C16 in an NADPH-dependent manner with preference to medium chain length substrate. May have a role in the mitochondrial synthesis of fatty acids.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q9BV79|MECR_HUMAN Trans-2-enoyl-CoA reductase, mitochondrial OS=Homo sapiens GN=MECR PE=1 SV=2

 Score =  221 bits (562), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 111/233 (47%), Positives = 153/233 (65%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPSDIN I+G Y   P++PAV
Sbjct: 44  RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGFLPELPAV 103

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
           GG EGV +V +VGS VT L PGDWVIP+    GTW++  V  +    +V  D P++ AAT
Sbjct: 104 GGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAAT 163

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           + VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN++RDR    +
Sbjct: 164 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK 223

Query: 229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
             ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L+ L
Sbjct: 224 LSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQL 276

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA with chain length from C6 to C16 in an NADPH-dependent manner with preference to medium chain length substrate. May have a role in the mitochondrial synthesis of fatty acids.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q7YS70|MECR_BOVIN Trans-2-enoyl-CoA reductase, mitochondrial OS=Bos taurus GN=MECR PE=1 SV=1

 Score =  216 bits (551), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 111/233 (47%), Positives = 151/233 (64%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A+VY   G P  V+++  L    V  + V VKMLAAPINPSDIN I+G Y + P++PAV
Sbjct: 44  RALVYGHHGDPAKVVELKNLELAAVGGSHVHVKMLAAPINPSDINMIQGNYGLLPQLPAV 103

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
           GG EGVG+V +VGS VT + PGDWVIP+ P  GTW++  V  +     V  D P++ AAT
Sbjct: 104 GGNEGVGQVVAVGSGVTGVKPGDWVIPANPGLGTWRTEAVFGEEELITVPSDIPLQSAAT 163

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           + VNP TA RML DF  L   DSI+QN + S VGQ +IQIA  RG+ +IN++RD     +
Sbjct: 164 LGVNPCTAYRMLVDFERLRPRDSIIQNASNSGVGQAVIQIAAARGLRTINVLRDTPDLQK 223

Query: 229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
             + LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L+ L
Sbjct: 224 LTDTLKNLGANHVVTEEELRKPEMKSFFKDVPQPRLALNCVGGKSSTELLRHL 276

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA with chain length from C6 to C16 in an NADPH-dependent manner with preference to medium chain length substrate. May have a role in the mitochondrial synthesis of fatty acids.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q6GQN8|MECR_DANRE Trans-2-enoyl-CoA reductase, mitochondrial OS=Danio rerio GN=mecr PE=2 SV=2

 Score =  207 bits (526), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 106/233 (45%), Positives = 143/233 (61%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           A++Y   G P  V+++  L   +V    V VKMLAAPINPSD+N ++G Y + P++PAVG
Sbjct: 47  ALLYRNHGEPSQVVQLESLDLPQVGAECVLVKMLAAPINPSDLNMLQGTYAILPELPAVG 106

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATI 169
           G EGV +V  VG  V  L  GDWVIP     GTW++  V        + KD P+  AAT+
Sbjct: 107 GNEGVAQVMEVGDKVKTLKVGDWVIPKDAGIGTWRTAAVLKADDLVTLPKDIPVLSAATL 166

Query: 170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA 229
            VNP TA RML DF  L +GD+++QN A S VGQ +IQIA  +GIH+IN+IRDR    + 
Sbjct: 167 GVNPCTAYRMLTDFEELKAGDTVIQNAANSGVGQAVIQIAAAKGIHTINVIRDRPDLRQL 226

Query: 230 KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282
            ++L  +GA  V TE  L    +K L  + P P L  N VGG SA+++L+ L+
Sbjct: 227 SDRLTAMGATHVITEETLRRPEMKELFKSCPRPKLALNGVGGKSATELLRHLQ 279

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q28GQ2|MECR_XENTR Trans-2-enoyl-CoA reductase, mitochondrial OS=Xenopus tropicalis GN=mecr PE=2 SV=1

 Score =  204 bits (518), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 115/258 (44%), Positives = 157/258 (60%), Gaps = 7/258 (2%)

Query: 26  WAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAA 85
           W G R       R FS+L +   + +VYE+ G P  V+++  +      +N+V VKMLAA
Sbjct: 2   WLGLRLFH----RPFSSLAA---RGLVYEKHGEPLQVLRLKNVNITHPADNEVRVKMLAA 54

Query: 86  PINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQS 145
           PINPSDIN ++G Y + P++PAVGG EGVG V  +G  V+ + PGDWV+P     GTW +
Sbjct: 55  PINPSDINMVQGTYALLPQLPAVGGNEGVGVVVEIGRHVSSMRPGDWVVPVDAGLGTWCT 114

Query: 146 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI 205
             V  +    +V  D P+  AAT+ VNP TA R+L DF TL  GD+I+QN + S VGQ +
Sbjct: 115 EAVFSEDSLVRVPSDIPVAGAATVSVNPCTAYRLLSDFETLRPGDTIIQNASNSGVGQAV 174

Query: 206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG 265
           IQIA   GI +IN++RDR       ++L+ LGAD V TE QL    +K L  N P P L 
Sbjct: 175 IQIATSLGITTINVVRDREDLSSLIQRLRDLGADHVITEEQLRKPEMKDLFKNCPRPRLA 234

Query: 266 FNCVGGNSASKVLKFLRF 283
            NCVGG S +++L+ L +
Sbjct: 235 LNCVGGKSTTEMLRHLDY 252

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids (By similarity). Functions in pronephros development, regulating late differentiation of all pronephric tubule segments.

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q9V6U9|MECR_DROME Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Drosophila melanogaster GN=CG16935 PE=3 SV=2

 Score =  201 bits (512), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 114/254 (44%), Positives = 154/254 (60%), Gaps = 3/254 (1%)

Query: 30  RRVQAQRVRA--FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPI 87
           RR    R+ A  +S  MS  +K++ Y + G P  V++++E    + K+N V VK+LAAPI
Sbjct: 3   RRGFLSRINAAQWSRQMSVVAKSLKYTQHGEPQEVLQLVEDKLPDPKDNQVLVKILAAPI 62

Query: 88  NPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYV 147
           NP+DIN I+G YPV+PK PAVGG E V EV  VG  V     G  VIP     GTW ++ 
Sbjct: 63  NPADINTIQGKYPVKPKFPAVGGNECVAEVICVGDKVKGFEAGQHVIPLASGLGTWTTHA 122

Query: 148 VKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207
           V  +     VSK   +  AAT  VNP TA RML+DF  L  GD+++QNGA S VGQ + Q
Sbjct: 123 VYKEDQLLIVSKKVGLAEAATSTVNPTTAYRMLKDFVQLCPGDTVIQNGANSAVGQAVHQ 182

Query: 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267
           + R  GI+S+ I+RDR    E K+ L+ LGA EV TE+++   ++      L +P L FN
Sbjct: 183 LCRAWGINSVGIVRDRPEIAELKQMLQCLGATEVLTEAEIRTSDIFK-SGKLKKPRLAFN 241

Query: 268 CVGGNSASKVLKFL 281
           CVGG SA++V + L
Sbjct: 242 CVGGKSATEVSRHL 255

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|O45903|MECR1_CAEEL Probable trans-2-enoyl-CoA reductase 1, mitochondrial OS=Caenorhabditis elegans GN=W09H1.5 PE=3 SV=1

 Score =  185 bits (469), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/232 (43%), Positives = 143/232 (61%), Gaps = 14/232 (6%)

Query: 48  SKAVVYE-REGPPDSVIKMIELPPVEVKE----NDVCVKMLAAPINPSDINRIEGVYPVR 102
           ++ +VYE    PP++    I+L  V + +    + V V+ +AAPINP+D+N+I+GVYPV+
Sbjct: 17  TRQLVYEGYRNPPEA----IQLKTVTIADKPSADQVLVQWIAAPINPADLNQIQGVYPVK 72

Query: 103 PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSP 162
           P +PAVGG EG G+V SVGS V+ +  GD VIP     GTW+   +  ++    +     
Sbjct: 73  PALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPDRSGLGTWRELGLHQENDLFPIDNTLS 132

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
           MEYAAT  VNP TA RML+DF  L  GD++ QNGA S VG+ +IQI R  GI ++N++R 
Sbjct: 133 MEYAATFQVNPPTAYRMLKDFIDLKKGDTVAQNGANSAVGKHVIQICRILGIKTVNVVRS 192

Query: 223 RAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA 274
           R   +E  ++LK LGADEV T+ +L  +  K      P   L  NCVGG S+
Sbjct: 193 RDNLEELVKELKDLGADEVITQEELYSRKKK-----FPGVKLALNCVGGRSS 239

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

>sp|Q54YT4|MECR_DICDI Trans-2-enoyl-CoA reductase, mitochondrial OS=Dictyostelium discoideum GN=mecr PE=3 SV=1

 Score =  175 bits (443), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 144/248 (58%), Gaps = 9/248 (3%)

Query: 37  VRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPV--EVKENDVCVKMLAAPINPSDINR 94
           VR +S      S++V     G P + +K IE   +  ++   DV V+ML APINP+D+N 
Sbjct: 11  VRRYST-----SRSVKIASHGSPSTALK-IENENITDKISNKDVLVEMLHAPINPADLNI 64

Query: 95  IEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS-GTWQSYVVKDQSV 153
           I+G Y    +V  V G EGVG V  VGS VT L   D V+PS     G+W+S  V  +  
Sbjct: 65  IQGTYGTNVQVGGVAGMEGVGVVKKVGSGVTGLKENDLVVPSMKQHFGSWRSKGVWSEQQ 124

Query: 154 WHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG 213
             KV  D P EY +TI +NP TA  +L DF  L  GD I+QN + S+VG  +IQ+A+ RG
Sbjct: 125 LFKVPSDIPTEYLSTISINPTTAYLLLNDFVKLQQGDVIIQNASNSMVGLSVIQLAKARG 184

Query: 214 IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS 273
           I +IN+IRD +  ++  ++LK LG D V +E  +     + L+++LP P L  N VGG S
Sbjct: 185 IKTINVIRDGSEFEDNVQRLKQLGGDIVVSEEYVRTPAFRKLISDLPSPKLALNAVGGQS 244

Query: 274 ASKVLKFL 281
           A+++ + L
Sbjct: 245 ATELSRIL 252

Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	288
255578755	379	zinc binding dehydrogenase, putative [Ri	0.972	0.738	0.768	1e-124
239909313	380	trans-2-enoyl CoA reductase [Jatropha cu	0.975	0.739	0.783	1e-124
359479028	373	PREDICTED: probable trans-2-enoyl-CoA re	0.961	0.742	0.783	1e-123
224120990	368	predicted protein [Populus trichocarpa]	0.854	0.668	0.846	1e-121
118481570	368	unknown [Populus trichocarpa]	0.854	0.668	0.846	1e-121
297746179	335	unnamed protein product [Vitis vinifera]	0.829	0.713	0.866	1e-120
449462097	369	PREDICTED: probable trans-2-enoyl-CoA re	0.868	0.677	0.808	1e-119
18408069	375	putative trans-2-enoyl-CoA reductase [Ar	0.854	0.656	0.800	1e-116
17064956	375	oxidoreductase of zinc-binding dehydroge	0.854	0.656	0.800	1e-116
297819102	376	oxidoreductase [Arabidopsis lyrata subsp	0.961	0.736	0.723	1e-114

>gi|255578755|ref|XP_002530235.1| zinc binding dehydrogenase, putative [Ricinus communis] gi|223530239|gb|EEF32141.1| zinc binding dehydrogenase, putative [Ricinus communis]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/281 (76%), Positives = 247/281 (87%), Gaps = 1/281 (0%)

Query: 2   ALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDS 61
            + RS+A+K + +  S++ +F+L      RVQ Q +RAFSALMSPPSKA+VY++ G P+S
Sbjct: 4   TIMRSLAMKAL-KCPSSSFLFNLRQTHNPRVQTQVIRAFSALMSPPSKAIVYDQHGAPES 62

Query: 62  VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG 121
           V +++E+PPVEVK+ DVCVKMLAAPINPSDINRIEGVYPVRP VPAVGGYEGVGEV+SVG
Sbjct: 63  VTRVVEMPPVEVKDKDVCVKMLAAPINPSDINRIEGVYPVRPPVPAVGGYEGVGEVHSVG 122

Query: 122 SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE 181
           SAV   +PGDWVIPSPP+ GTWQ+Y+V+DQSVWHK++KDSPM+YAATI VNPLTALRMLE
Sbjct: 123 SAVKDFSPGDWVIPSPPTFGTWQTYIVQDQSVWHKINKDSPMKYAATITVNPLTALRMLE 182

Query: 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           DFTTLNSGDS+VQNGATSIVGQCIIQIA+  GIHSINI+RDR GSDEAKE LK LGADEV
Sbjct: 183 DFTTLNSGDSVVQNGATSIVGQCIIQIAKFHGIHSINILRDRPGSDEAKEFLKELGADEV 242

Query: 242 FTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282
           FTE QL VKNVKGLL NLPEPALGFNCVGGNSAS VLKFLR
Sbjct: 243 FTEGQLAVKNVKGLLTNLPEPALGFNCVGGNSASLVLKFLR 283

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|239909313|gb|ACS32302.1| trans-2-enoyl CoA reductase [Jatropha curcas]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/282 (78%), Positives = 252/282 (89%), Gaps = 1/282 (0%)

Query: 1   MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPD 60
           M + RS A+K++N   S+  +F+L+W    R QAQ VR FSA MSPPSKAVVY+++GPPD
Sbjct: 4   MMMMRSTAMKVLNEPFSSL-LFNLKWGHIPRAQAQIVRTFSAFMSPPSKAVVYDQQGPPD 62

Query: 61  SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV 120
           SV +++E+PPVEVK NDVCVKMLA+PINPSDINRIEGVYPVRP VPAVGGYEGVGEV+SV
Sbjct: 63  SVTRVVEVPPVEVKANDVCVKMLASPINPSDINRIEGVYPVRPSVPAVGGYEGVGEVHSV 122

Query: 121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
           GSAV  L+PGDWVIPSPPS GTWQ+Y+V+DQSVWHK++K+SPMEYAAT+ VNPLTALRML
Sbjct: 123 GSAVKDLSPGDWVIPSPPSFGTWQTYIVQDQSVWHKINKESPMEYAATVTVNPLTALRML 182

Query: 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE 240
           EDFT+LNSGDS+VQNGATSIVGQC+IQIA+ RGI SINI+RDR GSDEAKE LK LGADE
Sbjct: 183 EDFTSLNSGDSVVQNGATSIVGQCVIQIAKFRGIRSINILRDRPGSDEAKETLKKLGADE 242

Query: 241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282
           VFTESQLEVKNVKGLL NLPEPALGFNCVGGN+AS VLKFLR
Sbjct: 243 VFTESQLEVKNVKGLLTNLPEPALGFNCVGGNAASLVLKFLR 284

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479028|ref|XP_002284705.2| PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial [Vitis vinifera]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 221/282 (78%), Positives = 241/282 (85%), Gaps = 5/282 (1%)

Query: 1   MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPD 60
           MAL R        R+   +S   L      R  +Q +RAFSA MSPPS AVVYE  GPP+
Sbjct: 1   MALVRLATA----RTHYGSSFLCLRSESLPRCWSQ-IRAFSAAMSPPSSAVVYEHHGPPE 55

Query: 61  SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV 120
           SV +++ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP VPAVGGYEGVGEV+S+
Sbjct: 56  SVTRVVELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPHVPAVGGYEGVGEVHSL 115

Query: 121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
           GSAV  L+PGDWVIPSPPSSGTWQ+YVVK+QSVWHK++KD PMEYAAT+ +NPLTALRML
Sbjct: 116 GSAVKGLSPGDWVIPSPPSSGTWQTYVVKEQSVWHKINKDVPMEYAATVTINPLTALRML 175

Query: 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE 240
           EDF  LN GD+IVQNGATSIVGQCIIQ+AR RGIHSINIIRDR GSDE KEKLKGLGADE
Sbjct: 176 EDFGNLNPGDAIVQNGATSIVGQCIIQLARIRGIHSINIIRDRVGSDEVKEKLKGLGADE 235

Query: 241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282
           VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA+ VLKFLR
Sbjct: 236 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSATLVLKFLR 277

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120990|ref|XP_002330876.1| predicted protein [Populus trichocarpa] gi|222872698|gb|EEF09829.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/247 (84%), Positives = 229/247 (92%), Gaps = 1/247 (0%)

Query: 37  VRAFSALM-SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI 95
           +RAFS+L+ SPPSKAVVYER GPPD+V ++IE+  VEVKE DVCVKM+AAPINPSDINRI
Sbjct: 26  IRAFSSLLTSPPSKAVVYERHGPPDAVTRVIEMEGVEVKEKDVCVKMMAAPINPSDINRI 85

Query: 96  EGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 155
           EGVYPVRP +PA+GGYEGVGEV SVGSAV  L+PGDWVIPSPPSSGTWQ+Y+VK++SVWH
Sbjct: 86  EGVYPVRPPLPAIGGYEGVGEVLSVGSAVKHLSPGDWVIPSPPSSGTWQTYIVKEESVWH 145

Query: 156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH 215
           K+SKDSP+EYAATI VNPLTALRML+DF TLNSGD IVQNGATSIVGQCIIQ+ARHRGIH
Sbjct: 146 KISKDSPIEYAATITVNPLTALRMLQDFVTLNSGDCIVQNGATSIVGQCIIQLARHRGIH 205

Query: 216 SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSAS 275
           SINIIRDR GSDEAKE LK LGADEVFTESQLEVKN+KGLL NLPEPALGFNCVGGNSAS
Sbjct: 206 SINIIRDRVGSDEAKEMLKRLGADEVFTESQLEVKNIKGLLTNLPEPALGFNCVGGNSAS 265

Query: 276 KVLKFLR 282
            VLKFLR
Sbjct: 266 LVLKFLR 272

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481570|gb|ABK92727.1| unknown [Populus trichocarpa]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/247 (84%), Positives = 229/247 (92%), Gaps = 1/247 (0%)

Query: 37  VRAFSALM-SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI 95
           +RAFS+L+ SPPSKAVVYER GPPD+V ++IE+  VEVKE DVCVKM+AAPINPSDINRI
Sbjct: 26  IRAFSSLLTSPPSKAVVYERHGPPDAVTRVIEMEGVEVKEKDVCVKMMAAPINPSDINRI 85

Query: 96  EGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 155
           EGVYPVRP +PA+GGYEGVGEV SVGSAV  L+PGDWVIPSPPSSGTWQ+Y+VK++SVWH
Sbjct: 86  EGVYPVRPPLPAIGGYEGVGEVLSVGSAVKHLSPGDWVIPSPPSSGTWQTYIVKEESVWH 145

Query: 156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH 215
           K+SKDSP+EYAATI VNPLTALRML+DF TLNSGD IVQNGATSIVGQCIIQ+ARHRGIH
Sbjct: 146 KISKDSPIEYAATITVNPLTALRMLQDFVTLNSGDCIVQNGATSIVGQCIIQLARHRGIH 205

Query: 216 SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSAS 275
           SINIIRDR GSDEAKE LK LGADEVFTESQLEVKN+KGLL NLPEPALGFNCVGGNSAS
Sbjct: 206 SINIIRDRVGSDEAKEMLKRLGADEVFTESQLEVKNIKGLLTNLPEPALGFNCVGGNSAS 265

Query: 276 KVLKFLR 282
            VLKFLR
Sbjct: 266 LVLKFLR 272

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746179|emb|CBI16235.3| unnamed protein product [Vitis vinifera]

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/239 (86%), Positives = 223/239 (93%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 103
           MSPPS AVVYE  GPP+SV +++ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP
Sbjct: 1   MSPPSSAVVYEHHGPPESVTRVVELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 60

Query: 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPM 163
            VPAVGGYEGVGEV+S+GSAV  L+PGDWVIPSPPSSGTWQ+YVVK+QSVWHK++KD PM
Sbjct: 61  HVPAVGGYEGVGEVHSLGSAVKGLSPGDWVIPSPPSSGTWQTYVVKEQSVWHKINKDVPM 120

Query: 164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223
           EYAAT+ +NPLTALRMLEDF  LN GD+IVQNGATSIVGQCIIQ+AR RGIHSINIIRDR
Sbjct: 121 EYAATVTINPLTALRMLEDFGNLNPGDAIVQNGATSIVGQCIIQLARIRGIHSINIIRDR 180

Query: 224 AGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282
            GSDE KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA+ VLKFLR
Sbjct: 181 VGSDEVKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSATLVLKFLR 239

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462097|ref|XP_004148778.1| PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial-like [Cucumis sativus] gi|449527392|ref|XP_004170695.1| PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial-like [Cucumis sativus]

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/250 (80%), Positives = 231/250 (92%)

Query: 33  QAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI 92
            ++ +RAFS +MSPPS AVVY+  GPPD+V ++I LPPVE+K NDVCVKMLAAPINPSDI
Sbjct: 24  NSRTIRAFSVIMSPPSTAVVYDLHGPPDTVTRVINLPPVEMKANDVCVKMLAAPINPSDI 83

Query: 93  NRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQS 152
           NRIEGVYPVRP+VPAVGGYEGVGEV+SVG+AV  L+PGDWVIPSPPSSGTWQ+YVVKDQS
Sbjct: 84  NRIEGVYPVRPEVPAVGGYEGVGEVHSVGNAVQGLSPGDWVIPSPPSSGTWQTYVVKDQS 143

Query: 153 VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR 212
           VWHK++K+ PMEYAAT+ VNPLTALRMLEDF +L +GDS+VQNGATSIVGQCIIQ+A+ R
Sbjct: 144 VWHKINKEVPMEYAATVTVNPLTALRMLEDFVSLKAGDSVVQNGATSIVGQCIIQLAKIR 203

Query: 213 GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN 272
           GIHSINIIRDRAGSD++KEKLK LGADE+F+ESQLEVKNVK LLANLPEPALGFNCVGGN
Sbjct: 204 GIHSINIIRDRAGSDKSKEKLKRLGADEIFSESQLEVKNVKSLLANLPEPALGFNCVGGN 263

Query: 273 SASKVLKFLR 282
           +A+ VLKFLR
Sbjct: 264 AATLVLKFLR 273

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18408069|ref|NP_566881.1| putative trans-2-enoyl-CoA reductase [Arabidopsis thaliana] gi|62900587|sp|Q8LCU7.1|MECR_ARATH RecName: Full=Probable trans-2-enoyl-CoA reductase, mitochondrial; Flags: Precursor gi|21592515|gb|AAM64465.1| nuclear receptor binding factor-like protein [Arabidopsis thaliana] gi|332644550|gb|AEE78071.1| putative trans-2-enoyl-CoA reductase [Arabidopsis thaliana]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 197/246 (80%), Positives = 223/246 (90%)

Query: 37  VRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE 96
           +++FS +MSPPSKA+VYE  G PDSV +++ LPPVEVKENDVCVKM+AAPINPSDINRIE
Sbjct: 34  IKSFSTIMSPPSKAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIE 93

Query: 97  GVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
           GVYPVRP VPAVGGYEGVGEVY+VGS V   +PGDWVIPSPPSSGTWQ+YVVK++SVWHK
Sbjct: 94  GVYPVRPPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHK 153

Query: 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216
           + K+ PMEYAATI VNPLTALRMLEDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +
Sbjct: 154 IDKECPMEYAATITVNPLTALRMLEDFVNLNSGDSVVQNGATSIVGQCVIQLARLRGIST 213

Query: 217 INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASK 276
           IN+IRDRAGSDEA+E+LK LGADEVF+ESQL VKNVK LL NLPEPALGFNCVGGN+AS 
Sbjct: 214 INLIRDRAGSDEAREQLKALGADEVFSESQLNVKNVKSLLGNLPEPALGFNCVGGNAASL 273

Query: 277 VLKFLR 282
           VLK+LR
Sbjct: 274 VLKYLR 279

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17064956|gb|AAL32632.1| oxidoreductase of zinc-binding dehydrogenase family [Arabidopsis thaliana] gi|21387141|gb|AAM47974.1| oxidoreductase of zinc-binding dehydrogenase family [Arabidopsis thaliana]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 197/246 (80%), Positives = 223/246 (90%)

Query: 37  VRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE 96
           +++FS +MSPPSKA+VYE  G PDSV +++ LPPVEVKENDVCVKM+AAPINPSDINRIE
Sbjct: 34  IKSFSTIMSPPSKAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIE 93

Query: 97  GVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
           GVYPVRP VPAVGGYEGVGEVY+VGS V   +PGDWVIPSPPSSGTWQ+YVVK++SVWHK
Sbjct: 94  GVYPVRPPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHK 153

Query: 157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216
           + K+ PMEYAATI VNPLTALRMLEDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +
Sbjct: 154 IDKECPMEYAATITVNPLTALRMLEDFVNLNSGDSVVQNGATSIVGQCVIQLARLRGIST 213

Query: 217 INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASK 276
           IN+IRDRAGSDEA+E+LK LGADEVF+ESQL VKNVK LL NLPEPALGFNCVGGN+AS 
Sbjct: 214 INLIRDRAGSDEAREQLKALGADEVFSESQLNVKNVKSLLGNLPEPALGFNCVGGNAASL 273

Query: 277 VLKFLR 282
           VLK+LR
Sbjct: 274 VLKYLR 279

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297819102|ref|XP_002877434.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297323272|gb|EFH53693.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/282 (72%), Positives = 233/282 (82%), Gaps = 5/282 (1%)

Query: 2   ALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSA-LMSPPSKAVVYEREGPPD 60
           AL +SVA     R++  +S  S       +      ++FS  +MSPPSKA+VYE  G PD
Sbjct: 3   ALMKSVA----GRALKFSSTASFRSNRHVKTPTLCTKSFSTVIMSPPSKAIVYEEHGSPD 58

Query: 61  SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV 120
           SV +++ LPPVEVKENDVCVKM+AAPINPSDINRIEGVYPVRP VPAVGGYEGVGEVY+V
Sbjct: 59  SVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIEGVYPVRPPVPAVGGYEGVGEVYAV 118

Query: 121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
           GS V   +PGDWVIPSPPSSGTWQ+YVVK++SVWHK+ K  PMEYAATI VNPLTALRML
Sbjct: 119 GSKVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHKIDKACPMEYAATITVNPLTALRML 178

Query: 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE 240
           EDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +IN+IRDRAGSDEA+E+LK LGAD 
Sbjct: 179 EDFVVLNSGDSVVQNGATSIVGQCVIQLARLRGISTINLIRDRAGSDEAREQLKALGADG 238

Query: 241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282
           VF+ESQL VKNVK LL NLPEPALGFNCVGGN+AS VLK+LR
Sbjct: 239 VFSESQLNVKNVKSLLGNLPEPALGFNCVGGNAASLVLKYLR 280

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	288
TAIR|locus:2102664	375	AT3G45770 [Arabidopsis thalian	0.843	0.648	0.744	8.4e-97
RGD|3208	373	Mecr "mitochondrial trans-2-en	0.840	0.648	0.440	4.7e-48
UNIPROTKB|Q9Z311	373	Mecr "Trans-2-enoyl-CoA reduct	0.840	0.648	0.440	4.7e-48
UNIPROTKB|F1MEY2	373	MECR "Trans-2-enoyl-CoA reduct	0.840	0.648	0.432	9.8e-48
UNIPROTKB|Q9BV79	373	MECR "Trans-2-enoyl-CoA reduct	0.840	0.648	0.419	4.2e-47
MGI|MGI:1349441	373	Mecr "mitochondrial trans-2-en	0.840	0.648	0.423	6.9e-47
UNIPROTKB|Q28GQ2	350	mecr "Trans-2-enoyl-CoA reduct	0.836	0.688	0.409	4.8e-46
UNIPROTKB|E2R1T2	367	MECR "Uncharacterized protein"	0.809	0.634	0.420	6.2e-46
UNIPROTKB|Q7YS70	373	MECR "Trans-2-enoyl-CoA reduct	0.840	0.648	0.419	3.4e-45
ZFIN|ZDB-GENE-050417-399	377	mecr "mitochondrial trans-2-en	0.809	0.618	0.407	2.5e-42

TAIR|locus:2102664 AT3G45770 [Arabidopsis thaliana (taxid:3702)]

 Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
 Identities = 181/243 (74%), Positives = 203/243 (83%)

Query:    40 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
             FS +MSPPSKA+VYE  G PDSV +++ LPPVEVKENDVCVKM+AAPINPSDINRIEGVY
Sbjct:    37 FSTIMSPPSKAIVYEEHGSPDSVTRLVNLPPVEVKENDVCVKMIAAPINPSDINRIEGVY 96

Query:   100 PVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK 159
             PVRP VP                     +PGDWVIPSPPSSGTWQ+YVVK++SVWHK+ K
Sbjct:    97 PVRPPVPAVGGYEGVGEVYAVGSNVNGFSPGDWVIPSPPSSGTWQTYVVKEESVWHKIDK 156

Query:   160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
             + PMEYAATI VNPLTALRMLEDF  LNSGDS+VQNGATSIVGQC+IQ+AR RGI +IN+
Sbjct:   157 ECPMEYAATITVNPLTALRMLEDFVNLNSGDSVVQNGATSIVGQCVIQLARLRGISTINL 216

Query:   220 IRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279
             IRDRAGSDEA+E+LK LGADEVF+ESQL VKNVK LL NLPEPALGFNCVGGN+AS VLK
Sbjct:   217 IRDRAGSDEAREQLKALGADEVFSESQLNVKNVKSLLGNLPEPALGFNCVGGNAASLVLK 276

Query:   280 FLR 282
             +LR
Sbjct:   277 YLR 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

RGD|3208 Mecr "mitochondrial trans-2-enoyl-CoA reductase" [Rattus norvegicus (taxid:10116)]

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 107/243 (44%), Positives = 144/243 (59%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             +SA   P   +A+VY   G P  VI++  L    V+ +DV VKMLAAPINPSDIN I+G 
Sbjct:    34 YSAFSEPSHVRALVYGNHGDPAKVIQLKNLELTAVEGSDVHVKMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y + PK+P                  + L PGDWVIP+    GTW++  V  +     V 
Sbjct:    94 YGLLPKLPAVGGNEGVGQVIAVGSSVSGLKPGDWVIPANAGLGTWRTEAVFSEEALIGVP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
             KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN
Sbjct:   154 KDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALGLKTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             +IRDR    +  ++LK LGAD V TE +L +   K +  +LP P L  NCVGG S++++L
Sbjct:   214 VIRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKNIFKDLPLPRLALNCVGGKSSTELL 273

Query:   279 KFL 281
             + L
Sbjct:   274 RHL 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO;IDA

GO:0006631 "fatty acid metabolic process" evidence=IEA;ISO;ISS

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA;ISO;ISS

UNIPROTKB|Q9Z311 Mecr "Trans-2-enoyl-CoA reductase, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 107/243 (44%), Positives = 144/243 (59%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             +SA   P   +A+VY   G P  VI++  L    V+ +DV VKMLAAPINPSDIN I+G 
Sbjct:    34 YSAFSEPSHVRALVYGNHGDPAKVIQLKNLELTAVEGSDVHVKMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y + PK+P                  + L PGDWVIP+    GTW++  V  +     V 
Sbjct:    94 YGLLPKLPAVGGNEGVGQVIAVGSSVSGLKPGDWVIPANAGLGTWRTEAVFSEEALIGVP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
             KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN
Sbjct:   154 KDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALGLKTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             +IRDR    +  ++LK LGAD V TE +L +   K +  +LP P L  NCVGG S++++L
Sbjct:   214 VIRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKNIFKDLPLPRLALNCVGGKSSTELL 273

Query:   279 KFL 281
             + L
Sbjct:   274 RHL 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MEY2 MECR "Trans-2-enoyl-CoA reductase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 105/243 (43%), Positives = 144/243 (59%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             FSA   P   +A+VY   G P  V+++  L    V  +DV VKMLAAPINPSDIN I+G 
Sbjct:    34 FSASAEPSRVRALVYGHHGDPAKVVELKNLELAAVGGSDVHVKMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y + P++P                  T + PGDWVIP+ P  GTW++  V  +     V 
Sbjct:    94 YGLLPQLPAVGGNEGVGQVVAVGSGVTGVKPGDWVIPANPGLGTWRTEAVFGEEELITVP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
              D P++ AAT+ VNP TA RML DF  L  GDSI+QN + S VGQ +IQIA  RG+ +IN
Sbjct:   154 SDIPLQSAATLGVNPCTAYRMLVDFERLRPGDSIIQNASNSGVGQAVIQIAAARGLRTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             ++RDR    +  ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L
Sbjct:   214 VLRDRPDLQKLTDRLKNLGANHVVTEEELRKPEMKSFFKDVPQPRLALNCVGGKSSTELL 273

Query:   279 KFL 281
             + L
Sbjct:   274 RHL 276

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q9BV79 MECR "Trans-2-enoyl-CoA reductase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 102/243 (41%), Positives = 143/243 (58%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             +SA   P   +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPSDIN I+G 
Sbjct:    34 YSASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y   P++P                  T L PGDWVIP+    GTW++  V  +    +V 
Sbjct:    94 YGFLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
              D P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN
Sbjct:   154 SDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             ++RDR    +  ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L
Sbjct:   214 VVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELL 273

Query:   279 KFL 281
             + L
Sbjct:   274 RQL 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IDA

GO:0006631 "fatty acid metabolic process" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

MGI|MGI:1349441 Mecr "mitochondrial trans-2-enoyl-CoA reductase" [Mus musculus (taxid:10090)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 103/243 (42%), Positives = 144/243 (59%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             +SAL  P   +A+VY   G P  V+++  L    V+ +DV V+MLAAPINPSDIN I+G 
Sbjct:    34 YSALSEPSRVRALVYGNHGDPAKVVQLKNLELTAVEGSDVHVRMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y + PK+P                  + L PGDWVIP+    GTW++  V  +     + 
Sbjct:    94 YGLLPKLPAVGGNEGVGQVIAVGSSVSALKPGDWVIPANAGLGTWRTEAVFSEEALIGIP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
             KD P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA    + +IN
Sbjct:   154 KDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALRLKTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             ++RDR    +  ++LK LGAD V TE +L +   K +  +LP P L  NCVGG S++++L
Sbjct:   214 VVRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKTIFKDLPLPRLALNCVGGKSSTELL 273

Query:   279 KFL 281
             + L
Sbjct:   274 RHL 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005829 "cytosol" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=ISO

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=ISO

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|Q28GQ2 mecr "Trans-2-enoyl-CoA reductase, mitochondrial" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 100/244 (40%), Positives = 141/244 (57%)

Query:    40 FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
             FS+L +   + +VYE+ G P  V+++  +      +N+V VKMLAAPINPSDIN ++G Y
Sbjct:    12 FSSLAA---RGLVYEKHGEPLQVLRLKNVNITHPADNEVRVKMLAAPINPSDINMVQGTY 68

Query:   100 PVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK 159
              + P++P                  + + PGDWV+P     GTW +  V  +    +V  
Sbjct:    69 ALLPQLPAVGGNEGVGVVVEIGRHVSSMRPGDWVVPVDAGLGTWCTEAVFSEDSLVRVPS 128

Query:   160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
             D P+  AAT+ VNP TA R+L DF TL  GD+I+QN + S VGQ +IQIA   GI +IN+
Sbjct:   129 DIPVAGAATVSVNPCTAYRLLSDFETLRPGDTIIQNASNSGVGQAVIQIATSLGITTINV 188

Query:   220 IRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK 279
             +RDR       ++L+ LGAD V TE QL    +K L  N P P L  NCVGG S +++L+
Sbjct:   189 VRDREDLSSLIQRLRDLGADHVITEEQLRKPEMKDLFKNCPRPRLALNCVGGKSTTEMLR 248

Query:   280 FLRF 283
              L +
Sbjct:   249 HLDY 252

GO:0039020 "pronephric nephron tubule development" evidence=IMP

UNIPROTKB|E2R1T2 MECR "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 98/233 (42%), Positives = 137/233 (58%)

Query:    49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
             +A++Y   G P  V+++  L    V  +DV VKMLAAPINPSDIN I+G Y + PK+P  
Sbjct:    37 RALIYGHHGDPAKVVELKNLELAAVGGSDVHVKMLAAPINPSDINMIQGNYGLLPKLPAV 96

Query:   109 XXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
                             T + PGDWVIP+    GTW++  V  +     V  D P++ AAT
Sbjct:    97 GGNEGVGQVVAVGGSVTGVKPGDWVIPANAGLGTWRTEAVFSEEALIGVPSDIPLQSAAT 156

Query:   169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
             + VNP TA RML DF  L  GD ++QN + S VGQ +IQIA   G+ +IN++RDR    E
Sbjct:   157 LGVNPCTAYRMLMDFEQLQPGDWVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDLQE 216

Query:   229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
               ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L+ L
Sbjct:   217 LTDRLKSLGAEHVLTEEELRKHEMKNFFKDMPQPRLALNCVGGKSSTELLRHL 269

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q7YS70 MECR "Trans-2-enoyl-CoA reductase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 102/243 (41%), Positives = 140/243 (57%)

Query:    40 FSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV 98
             FSA   P   +A+VY   G P  V+++  L    V  + V VKMLAAPINPSDIN I+G 
Sbjct:    34 FSASAEPSRVRALVYGHHGDPAKVVELKNLELAAVGGSHVHVKMLAAPINPSDINMIQGN 93

Query:    99 YPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
             Y + P++P                  T + PGDWVIP+ P  GTW++  V  +     V 
Sbjct:    94 YGLLPQLPAVGGNEGVGQVVAVGSGVTGVKPGDWVIPANPGLGTWRTEAVFGEEELITVP 153

Query:   159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
              D P++ AAT+ VNP TA RML DF  L   DSI+QN + S VGQ +IQIA  RG+ +IN
Sbjct:   154 SDIPLQSAATLGVNPCTAYRMLVDFERLRPRDSIIQNASNSGVGQAVIQIAAARGLRTIN 213

Query:   219 IIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
             ++RD     +  + LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L
Sbjct:   214 VLRDTPDLQKLTDTLKNLGANHVVTEEELRKPEMKSFFKDVPQPRLALNCVGGKSSTELL 273

Query:   279 KFL 281
             + L
Sbjct:   274 RHL 276

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IDA

GO:0006631 "fatty acid metabolic process" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-050417-399 mecr "mitochondrial trans-2-enoyl-CoA reductase" [Danio rerio (taxid:7955)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 95/233 (40%), Positives = 131/233 (56%)

Query:    50 AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXX 109
             A++Y   G P  V+++  L   +V    V VKMLAAPINPSD+N ++G Y + P++P   
Sbjct:    47 ALLYRNHGEPSQVVQLESLDLPQVGAECVLVKMLAAPINPSDLNMLQGTYAILPELPAVG 106

Query:   110 XXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATI 169
                              L  GDWVIP     GTW++  V        + KD P+  AAT+
Sbjct:   107 GNEGVAQVMEVGDKVKTLKVGDWVIPKDAGIGTWRTAAVLKADDLVTLPKDIPVLSAATL 166

Query:   170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA 229
              VNP TA RML DF  L +GD+++QN A S VGQ +IQIA  +GIH+IN+IRDR    + 
Sbjct:   167 GVNPCTAYRMLTDFEELKAGDTVIQNAANSGVGQAVIQIAAAKGIHTINVIRDRPDLRQL 226

Query:   230 KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282
              ++L  +GA  V TE  L    +K L  + P P L  N VGG SA+++L+ L+
Sbjct:   227 SDRLTAMGATHVITEETLRRPEMKELFKSCPRPKLALNGVGGKSATELLRHLQ 279

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0039020 "pronephric nephron tubule development" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LCU7	MECR_ARATH	1, ., 3, ., 1, ., 3, 8	0.8008	0.8541	0.656	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.38	0.824

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00024445001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (373 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00019100001	SubName- Full=Chromosome chr15 scaffold_19, whole genome shotgun sequence; (338 aa)						•			0.899
	GSVIVG00009528001	SubName- Full=Chromosome undetermined scaffold_237, whole genome shotgun sequence; (256 aa)						•			0.899
	GSVIVG00001357001	SubName- Full=Chromosome undetermined scaffold_116, whole genome shotgun sequence; Flags- Fragm [...] (176 aa)				•					0.466

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	288
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-111
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	4e-68
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	4e-48
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-37
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	8e-36
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-34
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	4e-31
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-26
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	9e-26
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-24
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	3e-24
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	4e-24
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	9e-24
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	4e-23
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	1e-20
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-18
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-18
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	1e-17
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	2e-17
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	8e-17
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	3e-16
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	6e-16
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	6e-16
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-15
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	3e-15
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	4e-15
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	7e-15
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-14
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-14
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	3e-14
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	6e-14
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-13
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	3e-13
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	5e-13
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-12
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	3e-12
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	3e-12
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	5e-12
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	7e-12
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	1e-11
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	4e-11
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-10
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-10
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	3e-10
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	3e-10
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	9e-10
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	1e-09
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	1e-09
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	2e-09
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-09
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	3e-09
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	4e-09
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	4e-09
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	6e-09
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	6e-09
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	6e-09
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	7e-09
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	7e-09
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	1e-08
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-08
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	2e-08
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	2e-08
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	3e-08
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	4e-08
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	8e-08
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	8e-08
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	8e-08
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	9e-08
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-07
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	2e-07
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	2e-07
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	3e-07
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	5e-07
cd05281	341	cd05281, TDH, Threonine dehydrogenase	6e-07
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	7e-07
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	9e-07
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-06
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	4e-06
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	6e-06
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	7e-06
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	1e-05
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	1e-05
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-05
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	2e-05
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	4e-05
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	6e-05
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	9e-05
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	1e-04
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-04
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	2e-04
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	3e-04
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	3e-04
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	4e-04
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	7e-04
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	7e-04
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	0.001
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	0.002
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	0.002
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	0.004

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score =  323 bits (830), Expect = e-111
 Identities = 120/241 (49%), Positives = 152/241 (63%), Gaps = 7/241 (2%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKE-NDVCVKMLAAPINPSDINRIEGVYPVRPK-- 104
           +KA+VY   G P  V+++           N+V VKMLAAPINP+DIN+I+GVYP++P   
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 105 --VPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSP 162
              PAVGG EGVGEV  VGS V  L PGDWVIP  P  GTW+++ V       KV  D  
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVD 120

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
            E AAT+ VNP TA R+LEDF  L  GD ++QNGA S VGQ +IQ+A+  GI +IN++RD
Sbjct: 121 PEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRD 180

Query: 223 RAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP--EPALGFNCVGGNSASKVLKF 280
           R   +E KE+LK LGAD V TE +L       LL + P   P L  NCVGG SA+++ + 
Sbjct: 181 RPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARL 240

Query: 281 L 281
           L
Sbjct: 241 L 241

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  214 bits (546), Expect = 4e-68
 Identities = 98/234 (41%), Positives = 130/234 (55%), Gaps = 8/234 (3%)

Query: 51  VVYEREGPPDS-VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           VVY + G P   V++++ LP       +V V+MLAAPINPSD+  I G Y  RP +PAV 
Sbjct: 1   VVYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVP 60

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATI 169
           G EGVG V  VGS V+ L  G  V+P     GTWQ YVV        V      E AA +
Sbjct: 61  GNEGVGVVVEVGSGVSGLLVGQRVLP-LGGEGTWQEYVVAPADDLIPVPDSISDEQAAML 119

Query: 170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA 229
            +NPLTA  ML ++  L  GD ++QN A S VG+ +IQ+A+  G  +IN++R     DE 
Sbjct: 120 YINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVR----RDEQ 175

Query: 230 KEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282
            E+LK LGADEV   S  +  + VK          L  + VGG SA+++ + LR
Sbjct: 176 VEELKALGADEVIDSSPEDLAQRVKEAT-GGAGARLALDAVGGESATRLARSLR 228

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  162 bits (413), Expect = 4e-48
 Identities = 74/237 (31%), Positives = 110/237 (46%), Gaps = 9/237 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAVV E  G P+ V+K++E+P  E    +V V++ AA +NP D+   +G+ P    +P +
Sbjct: 2   KAVVVEEFGGPE-VLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA 166
            G E  G V +VGS VT    GD V         G +  YVV        +      E A
Sbjct: 61  PGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEA 120

Query: 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS 226
           A + +  LTA   L D   L  G++++ +GA   VG   IQ+A+  G   + +      S
Sbjct: 121 AALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAV----VSS 176

Query: 227 DEAKEKLKGLGADEVFTES-QLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282
            E  E LK LGAD V     +  V+ V+ L        +  + VGG++ +  L  L 
Sbjct: 177 SEKLELLKELGADHVINYREEDFVEQVRELTGGKG-VDVVLDTVGGDTFAASLAALA 232

Length = 326

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score =  135 bits (342), Expect = 1e-37
 Identities = 76/235 (32%), Positives = 112/235 (47%), Gaps = 10/235 (4%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A V+ + G P  V+++ E+P       +V V+   +PI+  D+  I G Y  +P++PA+
Sbjct: 2   RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAI 61

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
           GG E VG V +VG  V  L  G  V  + P  GTW  Y V        +      E AA 
Sbjct: 62  GGSEAVGVVDAVGEGVKGLQVGQRVAVA-PVHGTWAEYFVAPADGLVPLPDGISDEVAAQ 120

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           +I  PL+AL ML DF  +  G  ++QN A   VG+ +  +A  RGI+ IN++R     D 
Sbjct: 121 LIAMPLSAL-MLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVR----RDA 175

Query: 229 AKEKLKGLGADEVF-TESQLEVKNVKGLLANLPEPAL-GFNCVGGNSASKVLKFL 281
              +L+ LG   V  TE       V+        P     + VGG  A ++L  L
Sbjct: 176 GVAELRALGIGPVVSTEQPGWQDKVREAAGG--APISVALDSVGGKLAGELLSLL 228

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score =  130 bits (329), Expect = 8e-36
 Identities = 77/237 (32%), Positives = 117/237 (49%), Gaps = 14/237 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEV---KENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           KA++ E  G P   +K + LP  EV      +V +K+ AAPINPSD+  ++G Y     +
Sbjct: 2   KALLLEEYGKP-LEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKAL 60

Query: 106 PAVGGYEGVGEVYSVG-SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPME 164
           P   G+EG G V + G   + +   G  V     S GT+  Y V D      +      E
Sbjct: 61  PVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFE 120

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDS-IVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223
             A+  VNPLTAL MLE  T    G   +V   A S +G+ ++++ +  GI  INI+R  
Sbjct: 121 QGASSFVNPLTALGMLE--TAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVR-- 176

Query: 224 AGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLK 279
               E  + LK +GA+ V   S  + ++++K L+A L    + F+ VGG    ++L 
Sbjct: 177 --RKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKL-NATIFFDAVGGGLTGQILL 230

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  127 bits (321), Expect = 1e-34
 Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 16/239 (6%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV--P 106
           KAV     G P+ V+++ ++P  E    +V VK+ AA +NP D+   EG+      +  P
Sbjct: 2   KAVRIHEYGGPE-VLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQSVWHKVSKDSPME 164
            + G++  G V +VG  VT    GD V         G +  YVV           +   E
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFE 120

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
            AA + +  LTA + L +   L +G +++ +GA   VG   +Q+A+ RG   I       
Sbjct: 121 EAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIAT----- 175

Query: 225 GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA-LGFNCVGGNSASKVLKFLR 282
            S    + L+ LGADEV     ++        A  P       + VGG + ++ L  ++
Sbjct: 176 ASAANADFLRSLGADEV-----IDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVK 229

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  116 bits (293), Expect = 4e-31
 Identities = 62/229 (27%), Positives = 92/229 (40%), Gaps = 29/229 (12%)

Query: 77  DVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
           +V V++ AA +  +D++   G YP  PK+P + G+EG G V  VG  VT +  GD V+  
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 137 PPSS----------------------GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL 174
           P                         G +  YVV        +     +E AA +     
Sbjct: 61  PNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLA 120

Query: 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 234
           TA   L     L  GD+++  GA   VG    Q+A+  G   I        SDE  E  K
Sbjct: 121 TAYHALRRAGVLKPGDTVLVLGA-GGVGLLAAQLAKAAGARVIVT----DRSDEKLELAK 175

Query: 235 GLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLR 282
            LGAD V    + +++    L        +  + VGG    ++ L+ LR
Sbjct: 176 ELGADHVIDYKEEDLEEELRLTGG-GGADVVIDAVGGPETLAQALRLLR 223

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  105 bits (264), Expect = 2e-26
 Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 11/199 (5%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            +AV + + G P+ V+++ ELP       +V +++ A  +N +D     G Y   P +PA
Sbjct: 1   MRAVRFHQFGGPE-VLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPA 59

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-PSSGTWQSY----VVKDQSVWHKVSKDSP 162
             GYE  G V +VG+ VT  A GD V   P    G + +Y    +V   +V       S 
Sbjct: 60  RLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSF 119

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
           +E AA + +  LTA   L +   L  GDS++   A+S VG   IQIA   G   I   R 
Sbjct: 120 VE-AAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTR- 177

Query: 223 RAGSDEAKEKLKGLGADEV 241
              + E ++ L  LGA  V
Sbjct: 178 ---TSEKRDALLALGAAHV 193

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  103 bits (259), Expect = 9e-26
 Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 10/195 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAV   + G P+ V++  ++P  E    +V V+  A  +N  D     G+YP+    P V
Sbjct: 1   KAVRIHKTGGPE-VLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL--PFV 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI-PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAA 167
            G EG G V +VG  VT    GD V    PP  G +  Y V   S   K+      E AA
Sbjct: 58  LGVEGAGVVEAVGPGVTGFKVGDRVAYAGPP--GAYAEYRVVPASRLVKLPDGISDETAA 115

Query: 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD 227
            +++  LTA  +L +   +  GD+++ + A   VG  + Q A+  G   I        S+
Sbjct: 116 ALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVI----GTVSSE 171

Query: 228 EAKEKLKGLGADEVF 242
           E  E  +  GAD V 
Sbjct: 172 EKAELARAAGADHVI 186

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  100 bits (250), Expect = 2e-24
 Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 31/220 (14%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAVV    G P  V++  +LP  E   ++V V++ AA +N  D+    G+  ++  +P +
Sbjct: 2   KAVVIRGHGGP-EVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------------GT 142
            G +G G V +VG  VT + PG  V+  P  S                          G 
Sbjct: 61  LGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGG 120

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +  YV         +  +   E AA   +  LTA  ML     L  G++++ +GA S VG
Sbjct: 121 YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVG 180

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
              IQIA+  G   I      AGS++  E+ K LGAD V 
Sbjct: 181 SAAIQIAKLFGATVIAT----AGSEDKLERAKELGADYVI 216

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 99.2 bits (248), Expect = 3e-24
 Identities = 68/198 (34%), Positives = 94/198 (47%), Gaps = 12/198 (6%)

Query: 51  VVYEREGPPDSVIKM-IELPPVEVKENDVCVKMLAAPINPSDINRIEGV-YPVRPKV-PA 107
           VVY R G P+ ++ + +E+P    K  +V VK+ AA +NP D     G    +  +  P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKD-QSVWHKVSKDSPME 164
           + G +  GEV +VGS VTR   GD V     P   G    YVV     +  K    S  E
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSF-E 119

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
            AA + V  LTAL+ L D   +  G  ++ NGA+  VG   +QIA+  G H   +     
Sbjct: 120 EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGV----- 174

Query: 225 GSDEAKEKLKGLGADEVF 242
            S    E ++ LGADEV 
Sbjct: 175 CSTRNAELVRSLGADEVI 192

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 98.8 bits (247), Expect = 4e-24
 Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 9/198 (4%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A+ Y   G PD V+++ +LP       +V V++ A+ +NP D     G YP  P +P V
Sbjct: 2   RAIRYHEFGAPD-VLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYV 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGD----WVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPME 164
            G +G G V +VG  V  L  GD      +      GT   YVV        +      E
Sbjct: 61  PGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFE 120

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
             A + +  LTA R L       +G++++ +G +  VG   +Q+AR  G   I      A
Sbjct: 121 QGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIAT----A 176

Query: 225 GSDEAKEKLKGLGADEVF 242
            S E  E ++  GAD VF
Sbjct: 177 SSAEGAELVRQAGADAVF 194

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 98.0 bits (245), Expect = 9e-24
 Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 7/208 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAVV +  G P+ +  + E+PP      +V +++ AA +N  D+  I+G Y V+P +P V
Sbjct: 2   KAVVCKELGGPEDL-VLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFV 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E  G V +VG  VT    GD V+      G +   VV   +    +      E AA 
Sbjct: 61  PGSEVAGVVEAVGEGVTGFKVGDRVVALTG-QGGFAEEVVVPAAAVFPLPDGLSFEEAAA 119

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           + V   TA   L     L  G++++  GA   VG   +Q+A+  G   I      A S+E
Sbjct: 120 LPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAA----ASSEE 175

Query: 229 AKEKLKGLGADEVFTESQLEVK-NVKGL 255
                + LGAD V      +++  VK L
Sbjct: 176 KLALARALGADHVIDYRDPDLRERVKAL 203

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 96.5 bits (241), Expect = 4e-23
 Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 26/211 (12%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V    G    V+  + +P  +   ++V VK+ A  +NP D    +  Y   P  PA+
Sbjct: 2   KAAVLTGPGGGLLVVVDVPVP--KPGPDEVLVKVKAVALNPVDWKHQD--YGFIPSYPAI 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI-------PSPPSSGTWQSYVVKDQSVWHKVSKDS 161
            G +  G V  VGS VTR   GD V        P+ P +G +Q YVV D  +  K+  + 
Sbjct: 58  LGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNI 117

Query: 162 PMEYAATIIVNPLTA-------LRMLEDFTTLNS---GDSIVQNGATSIVGQCIIQIARH 211
             E AAT+ V  +TA       L +       +    G  ++  G +S VG   IQ+A+ 
Sbjct: 118 SFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKL 177

Query: 212 RGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
            G   I        S +  + +K LGAD VF
Sbjct: 178 AGYKVITT-----ASPKNFDLVKSLGADAVF 203

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 89.6 bits (223), Expect = 1e-20
 Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 9/192 (4%)

Query: 48  SKAVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP 106
           ++ VV  R G P+ + +   +LP       +V VK+ A+ ++ +D+    G+YP +P +P
Sbjct: 1   NREVVVTRRGGPEVLKVVEADLPEPAA--GEVVVKVEASGVSFADVQMRRGLYPDQPPLP 58

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA 166
              GY+ VG V ++GS VT    GD V       G    Y+  D      V +      A
Sbjct: 59  FTPGYDLVGRVDALGSGVTGFEVGDRVAALTR-VGGNAEYINLDAKYLVPVPEGVDAAEA 117

Query: 167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS 226
             +++N +TA +ML     + +G  ++ +GA+  VGQ ++++A   G            S
Sbjct: 118 VCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYG-----TAS 172

Query: 227 DEAKEKLKGLGA 238
           +     L+ LGA
Sbjct: 173 ERNHAALRELGA 184

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 83.5 bits (207), Expect = 2e-18
 Identities = 69/246 (28%), Positives = 101/246 (41%), Gaps = 25/246 (10%)

Query: 49  KAVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA V  + G    + ++ IE+P       +V VK+ AA +NP D   I    P     P 
Sbjct: 2   KAWVLPKPGAALQLTLEEIEIPGP--GAGEVLVKVHAAGLNPVDWKVIAWGPPA-WSYPH 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY 165
           V G +G G V +VG+ VT    GD V    S    G++  Y V D      +      E 
Sbjct: 59  VPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEE 118

Query: 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG 225
           AA +    LTA + L     + +G +I+  G    VG   +Q+A+  G+  I        
Sbjct: 119 AAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVIT-----TC 173

Query: 226 SDEAKEKLKGLGADEVF-------TESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
           S    E +K LGAD V         E   E+   +G+ A         + VGG +A+ + 
Sbjct: 174 SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAV-------LDTVGGETAAALA 226

Query: 279 KFLRFR 284
             L F 
Sbjct: 227 PTLAFN 232

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 83.0 bits (206), Expect = 2e-18
 Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V E  G P+ V ++ E+P  +     V V++ A+ +NP D     G    RP +PA+
Sbjct: 2   KALVLESFGGPE-VFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPME 164
            G +  G V +VG  VTR   GD V           G+   Y V D  +      +  M 
Sbjct: 61  LGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMR 120

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
            AA + +  +TA   L D   + +G +++ +G    VG   +Q+A+  G           
Sbjct: 121 EAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYA-----T 175

Query: 225 GSDEAKEKLKGLGADEV 241
            S E     + LGAD +
Sbjct: 176 ASSEKAAFARSLGADPI 192

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 80.9 bits (201), Expect = 1e-17
 Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V +  G P+ V+++ E+P       +V +++ AA +N +D+ + +G+YP  P    +
Sbjct: 2   KAIVIKEPGGPE-VLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGD----WVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPME 164
            G E  G V +VG  VT    GD     +     + G +  YVV        V +   + 
Sbjct: 61  LGLEVAGVVVAVGPGVTGWKVGDRVCALL-----AGGGYAEYVVVPAGQLLPVPEGLSLV 115

Query: 165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
            AA +     TA + L     L +G++++ +G  S VG   IQ+A+  G   I      A
Sbjct: 116 EAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIAT----A 171

Query: 225 GSDEAKEKLKGLGADEVF 242
           GS+E  E  + LGAD   
Sbjct: 172 GSEEKLEACRALGADVAI 189

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 80.7 bits (200), Expect = 2e-17
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 42/225 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V E  G     +K + +P  E    +V VK+ A+ +  +D++   G +PV+PK+P +
Sbjct: 2   KAAVVEEFGEKPYEVKDVPVP--EPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLI 59

Query: 109 GGYEGVGEVYSVGSAVTRLAPGD-----WVI-----------------PSPPSS-----G 141
           GG+EG G V +VG  V+ L  GD     W+                  P+  +S     G
Sbjct: 60  GGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDG 119

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT---ALRMLEDFTTLNSGDSIVQNGAT 198
           T+  Y + D      +      E AA ++   +T   AL+       L  GD +V +GA 
Sbjct: 120 TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKAG----LKPGDWVVISGAG 175

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF 242
             +G   +Q A+  G+  I I  D     + K +L K LGAD   
Sbjct: 176 GGLGHLGVQYAKAMGLRVIAI--D---VGDEKLELAKELGADAFV 215

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 78.7 bits (195), Expect = 8e-17
 Identities = 65/207 (31%), Positives = 92/207 (44%), Gaps = 23/207 (11%)

Query: 49  KAVVYEREGP---PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           KA+ + +  P   PDS+I  IELP       D+ V++ A  +NP D     G  PV P  
Sbjct: 2   KAIGFTQPLPITDPDSLID-IELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQ 59

Query: 106 PAVGGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQ-SVWHKVSKDSP 162
           P + G++  G V +VGS VT    GD V         G+   Y + D+  V HK    S 
Sbjct: 60  PKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSF 119

Query: 163 MEYAATIIVNPLTAL--------RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI 214
            E AA     PLT+L        R+       N G +++  G    VG   IQ+A+   +
Sbjct: 120 AEAAAL----PLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQ--L 173

Query: 215 HSINIIRDRAGSDEAKEKLKGLGADEV 241
             + +I   A   E+   +K LGAD V
Sbjct: 174 TGLTVIAT-ASRPESIAWVKELGADHV 199

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 77.4 bits (191), Expect = 3e-16
 Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 39/226 (17%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V+E+ G  +  +K+ ++   +    +V +++  A +NP D N I     V+P  P +
Sbjct: 2   KALVFEKSGIEN--LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVIN-AVKVKPM-PHI 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV--------------------------IPSPPSSGT 142
            G E  G V  VG  V  +  GD V                          I    S+G 
Sbjct: 58  PGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGG 117

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +  Y+V  +    K+      E AA++ V  LTA   L+    L  G+++V  GA+   G
Sbjct: 118 YAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTG 176

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE 248
              +Q+A+  G   I + R        K+ LK  GADEV    ++E
Sbjct: 177 IFAVQLAKMMGAEVIAVSR--------KDWLKEFGADEVVDYDEVE 214

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 76.2 bits (188), Expect = 6e-16
 Identities = 69/231 (29%), Positives = 100/231 (43%), Gaps = 21/231 (9%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +AV  +  G  D V+K+ E P    K NDV +K+ AA +N +D  + +G YP  P    +
Sbjct: 3   RAVTLKGFGGVD-VLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEI 61

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E  G V  VGS V R   GD V+   P  G  +  V     V H + +    E AA 
Sbjct: 62  LGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMH-IPQGYTFEEAAA 120

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           I    LTA ++L+    +  G S++ +   S VG    Q+A   G  +I        S+E
Sbjct: 121 IPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATII----TTSSEE 176

Query: 229 AKEKLKGLGA--------DEVFTESQLEVKNVKGLLANLPEPALGFNCVGG 271
             +  K L A        +E F     ++   KG+        L  +CVGG
Sbjct: 177 KVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGV-------NLVLDCVGG 220

Length = 334

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 76.5 bits (189), Expect = 6e-16
 Identities = 69/257 (26%), Positives = 102/257 (39%), Gaps = 33/257 (12%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEG---------- 97
           KA      G  DS++ +     PV  K N V +K+ AA +NP D+    G          
Sbjct: 2   KAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKR 61

Query: 98  ----VYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGD--WVIPSPPSSGTWQSYVVKDQ 151
                     + P   G +  G V  +GS V     GD  W    P S GT   YVV  +
Sbjct: 62  KPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPE 121

Query: 152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN----SGDSIVQNGATSIVGQCIIQ 207
           +   K  K+   E AA++    LTA   L +   LN    +G  ++  G +  VG   IQ
Sbjct: 122 NEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQ 181

Query: 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKNVKGLLANLPEPALG 265
           + +  G H          S +A   +K LGAD+V  +     E +     L    +  + 
Sbjct: 182 LLKAWGAHVTTTC-----STDAIPLVKSLGADDVIDYNNEDFEEE-----LTERGKFDVI 231

Query: 266 FNCVGGNSASKVLKFLR 282
            + VGG++    LK L+
Sbjct: 232 LDTVGGDTEKWALKLLK 248

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 74.7 bits (185), Expect = 1e-15
 Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 14/163 (8%)

Query: 80  VKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS 139
           +++ AA +N  D+    G+YP      AV G E  G V  VG  VT LA GD V+    +
Sbjct: 1   IEVRAAGLNFRDVLIALGLYPG----EAVLGGECAGVVTRVGPGVTGLAVGDRVMGL--A 54

Query: 140 SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 199
            G + + VV D  +   +      E AAT+ V  LTA   L D   L  G+S++ + A  
Sbjct: 55  PGAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAG 114

Query: 200 IVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLGADE 240
            VGQ  IQ+ARH G  + +       AGS E ++ L+ LG  +
Sbjct: 115 GVGQAAIQLARHLGAEVFAT------AGSPEKRDFLRALGIPD 151

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 74.0 bits (182), Expect = 3e-15
 Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 12/173 (6%)

Query: 74  KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV 133
              +V +++ A  +N  D+  + G+YP  P  P   G+E  G V +VG  VTRLA GD V
Sbjct: 6   GPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEV 65

Query: 134 IPS-PPSSGTWQSYVVKDQS-VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT--LNSG 189
           I     S G   + V   +  V  K +  S  E  A     P+  L +++ F    L  G
Sbjct: 66  IAGTGESMGGHATLVTVPEDQVVRKPASLSFEEACAL----PVVFLTVIDAFARAGLAKG 121

Query: 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
           + I+   AT   G   +Q+AR +G      I   A SD+  E LK LG   V 
Sbjct: 122 EHILIQTATGGTGLMAVQLARLKGA----EIYATASSDDKLEYLKQLGVPHVI 170

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 74.2 bits (183), Expect = 4e-15
 Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 8/195 (4%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +AVV    G  D  +K+ +    E    +V V++ A  +N +D+   +G+Y   PK P V
Sbjct: 1   RAVVLTGFGGLD-KLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFV 59

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G+E  G V +VG  V     GD V+      G +   V         +      E AA 
Sbjct: 60  PGFECAGTVEAVGEGVKDFKVGDRVMGLTR-FGGYAEVVNVPADQVFPLPDGMSFEEAAA 118

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
             VN LTA   L +   L  G S++ + A   VG    Q+ +   + ++ ++     +  
Sbjct: 119 FPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKT--VPNVTVV---GTASA 173

Query: 229 AK-EKLKGLGADEVF 242
           +K E LK  G   V 
Sbjct: 174 SKHEALKENGVTHVI 188

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 73.0 bits (180), Expect = 7e-15
 Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 50/265 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V ++ G P   +++ E+P  E    +V +K+ A  +  +D++  +G +PV PK+P +
Sbjct: 5   KAAVLKKFGQP---LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV-PKLPLI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV-IPSPPSS--------------------------G 141
            G+E VG V  VG  VT L  GD V +     S                          G
Sbjct: 61  PGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDG 120

Query: 142 TWQSYV-VKDQSVWHKVSKDSPMEYAATIIVNPLT---ALRMLEDFTTLNSGDSIVQNGA 197
            +  YV V  + V   + +   +  AA ++   +T   AL+       +  G  +   GA
Sbjct: 121 GYAEYVVVPARYVVK-IPEGLDLAEAAPLLCAGITTYRALKKAN----VKPGKWVAVVGA 175

Query: 198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257
              +G   +Q A+  G   I I R    S+E  E  K LGAD V   S  +       +A
Sbjct: 176 GG-LGHMAVQYAKAMGAEVIAITR----SEEKLELAKKLGADHVINSSDSDALEAVKEIA 230

Query: 258 NLPEPALGFNCVGGNSASKVLKFLR 282
           +     +  + VG  +    LK LR
Sbjct: 231 DA---II--DTVGPATLEPSLKALR 250

Length = 339

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 59/167 (35%), Positives = 77/167 (46%), Gaps = 8/167 (4%)

Query: 75  ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVI 134
             +V VK     IN SDIN   G Y    K P   G+EGVGEV +VG  VT    GD V 
Sbjct: 30  PGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAV- 88

Query: 135 PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQ 194
            +  S G +  Y V        V +  P E    ++V+ LTA   LE+   + SG++++ 
Sbjct: 89  -ATMSFGAFAEYQVVPARHAVPVPELKP-EV-LPLLVSGLTASIALEEVGEMKSGETVLV 145

Query: 195 NGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
             A    GQ  +Q+A+  G H I        SDE  E LK LG D  
Sbjct: 146 TAAAGGTGQFAVQLAKLAGCHVIGT----CSSDEKAEFLKSLGCDRP 188

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 65/211 (30%), Positives = 94/211 (44%), Gaps = 29/211 (13%)

Query: 49  KAVVY-EREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP 106
           KA+ +     P    I  I+LP P   K+N++ VK+ AA +NP D+ ++   Y    KV 
Sbjct: 2   KALTFKNNTSPLT--ITTIKLPLPNCYKDNEIVVKVHAAALNPVDL-KLYNSYTFHFKVK 58

Query: 107 AVG-GYEGVGEVYSVGSAV-TRLAPGDWV--IPSPPSS--GTWQSYVVKD-----QSVWH 155
             G G +  G +  VGS V +    GD V  I   P    GT   Y++ D     +S+  
Sbjct: 59  EKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITR 118

Query: 156 KVSKDSPMEYAATIIVNPL---TALRMLEDF-TTLNSGDSIVQNGATSIVGQCIIQIA-R 210
           K    S  E AA     PL   TA ++LED    L     ++  G ++ VG+  IQ+A  
Sbjct: 119 KPENISLEEAAAW----PLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKN 174

Query: 211 HRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           H  I ++        S  + E  K LGAD  
Sbjct: 175 HYNIGTVVGT----CSSRSAELNKKLGADHF 201

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.4 bits (176), Expect = 3e-14
 Identities = 65/215 (30%), Positives = 90/215 (41%), Gaps = 30/215 (13%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA      G  D+ +K++E P  E    +V V++ A  +N  D+  + G YP   K P +
Sbjct: 2   KAWRLSGGGGLDN-LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS--------------------PPSSGTWQSYVV 148
              +G GEV +VG  VTR   GD V+P+                     P  G    YVV
Sbjct: 61  PLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVV 120

Query: 149 KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSI-VQ-NGATSIVGQCII 206
             +    +       E AAT+    LTA   L     L  GD++ VQ  G  S+     +
Sbjct: 121 LPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFA---L 177

Query: 207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           Q A+  G   I      + SDE  E+ K LGAD V
Sbjct: 178 QFAKAAGARVIAT----SSSDEKLERAKALGADHV 208

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 70.3 bits (173), Expect = 6e-14
 Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 7/139 (5%)

Query: 76  NDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
           ++V V++ AA +N  D+    G+ P         G E  G V  VGS VT L  GD V+ 
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGDE---TPLGLECSGIVTRVGSGVTGLKVGDRVMG 57

Query: 136 SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSI-VQ 194
              + G + ++V  D  +  K+      E AAT+ V  LTA   L D   L  G+S+ + 
Sbjct: 58  L--APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIH 115

Query: 195 NGATSIVGQCIIQIARHRG 213
             A   VGQ  IQ+A+H G
Sbjct: 116 AAAGG-VGQAAIQLAQHLG 133

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 68.8 bits (169), Expect = 2e-13
 Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 6/191 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+     G P+ V+ ++E+P    K  +V +++ AA +N  D+ +  G YP  P    +
Sbjct: 2   KAIEITEPGGPE-VLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E  GEV +VG  V+R   GD V       G  + YV         V +   +  AA 
Sbjct: 61  LGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAE-YVAVPAGQVLPVPEGLSLVEAAA 119

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           +     T    L     L +G++++ +G  S +G   IQ+A+  G          AGSDE
Sbjct: 120 LPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTT----AGSDE 175

Query: 229 AKEKLKGLGAD 239
                + LGAD
Sbjct: 176 KCAACEALGAD 186

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 61/242 (25%), Positives = 90/242 (37%), Gaps = 36/242 (14%)

Query: 57  GPPDSVIKMIELPPVEVKENDVCVKMLAAPINP------SDINRIEGVYPVRPKVPAVGG 110
            P D  ++ +++P  E  E  V ++ L   ++P      SD        PV      VGG
Sbjct: 23  VPDDFRLEEVDVP--EPGEGQVLLRTLYLSLDPYMRGRMSDAPSY--APPVELGEVMVGG 78

Query: 111 YEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKV-SKDSPMEYAATI 169
              V +V  V S      PGD V+        WQ Y + D     K+    +P+     +
Sbjct: 79  --TVAKV--VASNHPGFQPGDIVV----GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGV 130

Query: 170 IVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           +  P LTA   L D     +G+++V + A   VG  + QIA+ +G   + I    AG  E
Sbjct: 131 LGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGI----AGGAE 186

Query: 229 AKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPA-----LGFNCVGGNSASKVLKFLR 282
             + L   LG D        +          L E       + F  VGG     VL  L 
Sbjct: 187 KCDFLTEELGFDAGIDYKAEDFA------QALKEACPKGIDVYFENVGGEVLDAVLPLLN 240

Query: 283 FR 284
             
Sbjct: 241 LF 242

Length = 340

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 68.0 bits (167), Expect = 5e-13
 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           AV++E   P    I+ +EL        +V V++ AA +  SD++ + G  P    +PAV 
Sbjct: 4   AVLHEVGKPL--EIEEVELDDP--GPGEVLVRIAAAGLCHSDLHVVTGDLPAP--LPAVL 57

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIPSP-PSSGT 142
           G+EG G V  VG  VT + PGD V+ S  P+ GT
Sbjct: 58  GHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGT 91

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 42/235 (17%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+VYE  G     +++ E+P  E   ++V +K+ A  I  +D++  EG +      P V
Sbjct: 2   KALVYEGPG----ELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG--AAPPLV 55

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI--PSPP------------------------SSGT 142
            G+E  G V +VGS VT    GD V   P+                           +G 
Sbjct: 56  PGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGG 115

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT-ALRMLEDFTTLNSGDSIVQNGATSIV 201
           +  YVV      +K+  +   E AA     PL+ A+  L D   +  GDS++  GA  I 
Sbjct: 116 FAEYVVVPAKQVYKIPDNLSFEEAALA--EPLSCAVHGL-DLLGIKPGDSVLVFGAGPI- 171

Query: 202 GQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGL 255
           G  + Q+ +  G   + +    A  +E K +L K LGA E    S+ + +  K  
Sbjct: 172 GLLLAQLLKLNGASRVTV----AEPNEEKLELAKKLGATETVDPSREDPEAQKED 222

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 65.8 bits (161), Expect = 3e-12
 Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 38/220 (17%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           AVV+   GP     +  E+P  E    +V +K+ A  +  +D++  EG +    K P V 
Sbjct: 3   AVVHAAGGPL----EPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG-GSKYPLVP 57

Query: 110 GYEGVGEVYSVGSAVTRLAPGD-----WVIPS-----------PP-----------SSGT 142
           G+E VGEV  VG+ V     GD     W++ S                        + G 
Sbjct: 58  GHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGG 117

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +  Y+V D      +    P+  AA ++   +T    L D      G+ +   G   + G
Sbjct: 118 YAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDA-GPRPGERVAVLGIGGL-G 175

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
              +Q AR  G  ++ I R    S + +E  + LGADEV 
Sbjct: 176 HLAVQYARAMGFETVAITR----SPDKRELARKLGADEVV 211

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 61.9 bits (151), Expect = 3e-12
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 75  ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVI 134
             +V V++ AA I  SD++   G  P   K+P + G+EG G V  VG  VT L  GD V+
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPP-PVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVV 59

Query: 135 PSPPSS 140
             P   
Sbjct: 60  VYPLIP 65

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 65.1 bits (159), Expect = 5e-12
 Identities = 41/88 (46%), Positives = 49/88 (55%), Gaps = 7/88 (7%)

Query: 49  KAVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA V    G P  VI+ IE+ PP   K N+V +KMLA  +  +DI  IEG        P 
Sbjct: 4   KAAVAWEAGKP-LVIEEIEVAPP---KANEVRIKMLATSVCHTDILAIEGFKA--TLFPV 57

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
           + G+EG G V SVG  VT L PGD VIP
Sbjct: 58  ILGHEGAGIVESVGEGVTNLKPGDKVIP 85

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 64.8 bits (158), Expect = 7e-12
 Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 7/89 (7%)

Query: 49  KAVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA V   +G P S I+ IE+ PP   K  +V +K++A  +  +D++ I+G  P    +P 
Sbjct: 2   KAAVLWEKGKPLS-IEEIEVAPP---KAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPV 55

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
           + G+EG G V S+G  VT L PGD VIP 
Sbjct: 56  ILGHEGAGIVESIGPGVTTLKPGDKVIPL 84

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 64/238 (26%), Positives = 95/238 (39%), Gaps = 45/238 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA +  +   P  +    E+P  E    +V +K+ AA +   D+   +G +P R K P +
Sbjct: 2   KAAILHKPNKPLQIE---EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFP-RGKYPLI 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSSGT 142
            G+E VG V  VG  V R  PGD VI                                G 
Sbjct: 58  LGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGG 117

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGAT 198
           +  YV   +    K+  +   E AA +    +     AL+       +  GD+++  GA 
Sbjct: 118 FAEYVKVPERSLVKLPDNVSDESAA-LAACVVGTAVHALKR----AGVKKGDTVLVTGAG 172

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNVKG 254
             VG   IQ+A+  G   I + R    S E  + LK LGAD V   S+   +VK + G
Sbjct: 173 GGVGIHAIQLAKALGARVIAVTR----SPEKLKILKELGADYVIDGSKFSEDVKKLGG 226

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 62.1 bits (152), Expect = 4e-11
 Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 22/206 (10%)

Query: 48  SKAVVYER--EGPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPK 104
           ++ VV  +  EGPP     +++E+P  E+K+ +V V+ L   ++P     +       P 
Sbjct: 2   NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPP 61

Query: 105 VP---AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY-VVKDQSVWHKV--S 158
           V     + G  GVGEV  V S       GD V         WQ Y VV   S   K+  S
Sbjct: 62  VQLGEPMRGG-GVGEV--VESRSPDFKVGDLVSGFLG----WQEYAVVDGASGLRKLDPS 114

Query: 159 KDSPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
              P+     ++    LTA   L +      G+++V + A   VG  + QIA+  G   +
Sbjct: 115 LGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVV 174

Query: 218 NIIRDRAGSDEAKEKLKG-LGADEVF 242
            I    AGSDE    L   LG D   
Sbjct: 175 GI----AGSDEKCRWLVEELGFDAAI 196

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 58/234 (24%), Positives = 92/234 (39%), Gaps = 44/234 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V    GP D  ++ + +P  E    +V VK+ A  I  +D+ +I G +    K P +
Sbjct: 2   KAAVLH--GPNDVRLEEVPVP--EPGPGEVLVKVRACGICGTDVKKIRGGH-TDLKPPRI 56

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSSGT 142
            G+E  GE+  VG  VT    GD V  +P                             G 
Sbjct: 57  LGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGG 116

Query: 143 WQSYV-VKDQSVWH----KVSKDSPMEYAATIIVNPL-TALRMLEDFTTLNSGDSIVQNG 196
           +  YV V   +V      K+  +   E AA  +V PL   +        +  GD+++  G
Sbjct: 117 FAEYVRVPAWAVKRGGVLKLPDNVSFEEAA--LVEPLACCINAQRKA-GIKPGDTVLVIG 173

Query: 197 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK 250
           A  I G     +A+  G   + I+ D   ++   E  K LGAD     ++ ++ 
Sbjct: 174 AGPI-GLLHAMLAKASGARKV-IVSDL--NEFRLEFAKKLGADYTIDAAEEDLV 223

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 46  PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
             ++A V    G P   I+ ++L P   +  +V V++ A  +  +D + + G  P     
Sbjct: 1   MKTRAAVAREAGKPLE-IEEVDLDPP--RAGEVLVRITATGVCHTDAHTLSGDDPEG--F 55

Query: 106 PAVGGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
           PAV G+EG G V +VG  VT + PGD VI  
Sbjct: 56  PAVLGHEGAGIVEAVGEGVTSVKPGDHVILL 86

Length = 366

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 59.5 bits (145), Expect = 3e-10
 Identities = 71/253 (28%), Positives = 96/253 (37%), Gaps = 49/253 (19%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V    GP D   + I  P  E    +V VK+ A  I  SDI R  G     P  P V
Sbjct: 2   KALVLT--GPGDLRYEDIPKP--EPGPGEVLVKVKACGICGSDIPRYLGTGAYHP--PLV 55

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV--IPSPP------------------------SSGT 142
            G+E  G V  VGS V  LA GD V   P  P                          G 
Sbjct: 56  LGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGA 115

Query: 143 WQSYV-VKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGA 197
           +  YV V  +++  K+      E AA I   P      A+R+      +  GD++V  GA
Sbjct: 116 FAEYVSVPARNL-IKIPDHVDYEEAAMI--EPAAVALHAVRLAG----ITLGDTVVVIGA 168

Query: 198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257
            +I G   IQ  +  G   +  + D    DE     + LGAD+     + +V+ V+ L  
Sbjct: 169 GTI-GLLAIQWLKILGAKRVIAV-DI--DDEKLAVARELGADDTINPKEEDVEKVRELTE 224

Query: 258 NLPEPALGFNCVG 270
                 L     G
Sbjct: 225 GR-GADLVIEAAG 236

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V      P S I+ IE+ P +  E  V +K++A  I  SD + + G        P +
Sbjct: 9   KAAVLWEPKKPFS-IEEIEVAPPKAHE--VRIKIVATGICRSDDHVVSGKLV--TPFPVI 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIP 135
            G+E  G V SVG  VT + PGD VIP
Sbjct: 64  LGHEAAGIVESVGEGVTTVKPGDKVIP 90

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 58.4 bits (142), Expect = 9e-10
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAVVY   GP +  ++ +  P +E    D  V++    I  SD++   G     P    V
Sbjct: 2   KAVVYG--GPGNVAVEDVPDPKIE-HPTDAIVRITTTAICGSDLHMYRGRTGAEP--GLV 56

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI 134
            G+E +GEV  VGSAV  L  GD V+
Sbjct: 57  LGHEAMGEVEEVGSAVESLKVGDRVV 82

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 43/258 (16%)

Query: 48  SKAVVYEREGP-PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP 106
            KA+V  + GP P +V ++ E+P  E    +V +K+ AA I  SD++  +G Y    + P
Sbjct: 1   MKALV--KTGPGPGNV-ELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD-PVETP 56

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI----------------------PSPPSSGTWQ 144
            V G+E  G +  VG  V     GD V+                      P     GT  
Sbjct: 57  VVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQA 116

Query: 145 S-----YVVKDQSVWHKVSKDSPMEYAATIIVNPLT-ALRMLEDFTTLNSGDSIVQNGAT 198
                 YV+  +   H++ ++  +E AA  +  PL  A+  + + + +  GD++V  G  
Sbjct: 117 DGGFAEYVLVPEESLHELPENLSLEAAA--LTEPLAVAVHAVAERSGIRPGDTVVVFG-P 173

Query: 199 SIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLL 256
             +G    Q+A+ +G  +  +   +D    D AKE    LGAD V    +   + V   +
Sbjct: 174 GPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKE----LGADAVNGGEEDLAELVNE-I 228

Query: 257 ANLPEPALGFNCVGGNSA 274
            +     +   C G   A
Sbjct: 229 TDGDGADVVIECSGAVPA 246

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 57.9 bits (141), Expect = 1e-09
 Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 6/93 (6%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           AVV E  GP   V++ +EL   + + ++V V+++A  I  +D+   +G  P     PAV 
Sbjct: 6   AVVREPGGPF--VLEDVEL--DDPRPDEVLVRIVATGICHTDLVVRDGGLPTPL--PAVL 59

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGT 142
           G+EG G V +VGSAVT L PGD V+ S  S G 
Sbjct: 60  GHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGE 92

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 17/209 (8%)

Query: 49  KAVVYEREGP---PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           KAV Y++  P   PD+++  I+LP  +    D+ V++ A  +NP D      + P     
Sbjct: 1   KAVGYKKPLPITDPDALVD-IDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP-EAGQ 58

Query: 106 PAVGGYEGVGEVYSVGSAVTRLAPGD--WVIPSPPSSGTWQSY-VVKDQSVWHKVSKDSP 162
           P + G++  G V +VG  VT   PGD  W        G+   + +V ++ V HK  K   
Sbjct: 59  PKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHK-PKSLS 117

Query: 163 MEYAATIIVNPLTALRMLEDFTTLN-----SGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
              AA + +  +TA  +L D   +N        +++  G    VG  +IQ+AR   +  +
Sbjct: 118 FAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQ--LTGL 175

Query: 218 NIIRDRAGSDEAKEKLKGLGADEVFTESQ 246
            +I   A   E++E +  LGA  V   S+
Sbjct: 176 TVI-ATASRPESQEWVLELGAHHVIDHSK 203

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 57.2 bits (138), Expect = 2e-09
 Identities = 64/244 (26%), Positives = 97/244 (39%), Gaps = 51/244 (20%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI--EGV--YPVRPK 104
           K+VV + +G     +    +P ++  ++DV VK+ ++ +  SDI RI   G   YP+   
Sbjct: 2   KSVVNDTDG--IVRVAESPIPEIK-HQDDVLVKVASSGLCGSDIPRIFKNGAHYYPI--- 55

Query: 105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWV--IPSPP------------------------ 138
                G+E  G V +VGS V  L PGD V  +P  P                        
Sbjct: 56  ---TLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSR 112

Query: 139 SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 198
             G    Y+V  +     +  D P+E  A I   P+T             G +++  GA 
Sbjct: 113 RDGGNAEYIVVKRKNLFALPTDMPIEDGAFI--EPITVGLHAFHLAQGCEGKNVIIIGAG 170

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL---KGLGADEVFTESQLEVKNVKGL 255
           +I G   IQ A   G  S+  I      D   EKL   K LGA + F   ++    ++ +
Sbjct: 171 TI-GLLAIQCAVALGAKSVTAI------DINSEKLALAKSLGAMQTFNSREMSAPQIQSV 223

Query: 256 LANL 259
           L  L
Sbjct: 224 LREL 227

Length = 347

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           AV++    P    ++ IEL  P   K  +V VK++A+ +  SD + + G  P+ P+ P +
Sbjct: 5   AVLWGPGQP--WEVEEIELDDP---KAGEVLVKLVASGLCHSDEHLVTGDLPM-PRYPIL 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS-PPSSGT 142
           GG+EG G V  VG  VT + PGD V+ S  P+ G 
Sbjct: 59  GGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGR 93

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 56.2 bits (136), Expect = 4e-09
 Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 17/199 (8%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSD--INRIEGVYPVRPKVPA 107
           A+     GPP+ V+   ++P        V + + AA ++  D  +    G  P  P++P 
Sbjct: 3   AIRLHEFGPPE-VLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPY 61

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDW-----VIPSPPSSGTWQSYVVKDQSVWHKVSKDSP 162
           V G E  G V +VG  V       W     V  +  + G +    V D    H V     
Sbjct: 62  VPGGEVAGVVDAVGPGV----DPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLD 117

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
           +E A  ++ +  TAL +L D  TL  GD ++   A   +G  ++Q+A+  G   +     
Sbjct: 118 LEAAVAVVHDGRTALGLL-DLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGA--- 173

Query: 223 RAGSDEAKEKLKGLGADEV 241
            AG       ++ LGAD  
Sbjct: 174 -AGGPAKTALVRALGADVA 191

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 25/207 (12%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVP 106
           KA+V E+ G P+ V+K+ E+P  E K   V +++ A  +N S+I   +G  P    P+V 
Sbjct: 2   KAIVIEQPGGPE-VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVL 60

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI-------PSPPSSGTWQSYVVKDQSVWHKVSK 159
              G E VGEV           PG  V         +    G++  Y +      + +  
Sbjct: 61  ---GIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFD--GSYAEYTLVPNEQVYAIDS 113

Query: 160 DSPMEYAATIIVNPLTALRMLEDFTTLN--SGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
           D      A +     TA   L  F +L    GD+++  G TS VG   +++A+  G    
Sbjct: 114 DLSWAELAALPETYYTAWGSL--FRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVT 171

Query: 218 NIIRDRAGSDEAKEKLKGLGADEVFTE 244
              R    S E    LK LGADEV  +
Sbjct: 172 ATTR----SPERAALLKELGADEVVID 194

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 55.7 bits (135), Expect = 6e-09
 Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 55/232 (23%)

Query: 49  KAVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA+V E+ GP +   +++ E+P  E    +V +K+ A  +  +D++ +EG  P  PK+P 
Sbjct: 2   KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPL 60

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWV-IPSPPSS-------------------------- 140
           + G+E VG V +VG  VTR + GD V +P   S+                          
Sbjct: 61  IPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVD 120

Query: 141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL--------TALRMLEDFTTLNSGDSI 192
           G +  Y+V D+   + + +D   E AA     PL         AL++      L  G  +
Sbjct: 121 GGYAEYMVADERFAYPIPEDYDDEEAA-----PLLCAGIIGYRALKLAG----LKPGQRL 171

Query: 193 VQNGATSI--VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
              G           +QIAR++G       R     + A+E    LGAD   
Sbjct: 172 ---GLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARE----LGADWAG 216

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 55.8 bits (135), Expect = 6e-09
 Identities = 52/195 (26%), Positives = 74/195 (37%), Gaps = 23/195 (11%)

Query: 57  GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI-----NRIEGVYPVRPKVPAVGGY 111
           GP    ++    P        V V++    +  SD+      R   VYP  P  P   G+
Sbjct: 3   GPGRFEVEEHPRP--TPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGP---GH 57

Query: 112 EGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIV 171
           EG G V ++G  V  LA GD V     S G +  Y + D            +        
Sbjct: 58  EGWGRVVALGPGVRGLAVGDRVAGL--SGGAFAEYDLADAD---HAVPLPSLLDGQAFPG 112

Query: 172 NPL-TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII-RDRAGSDEA 229
            PL  AL +      + +G ++   GA  I G   +Q+A   G   +  I R  A    A
Sbjct: 113 EPLGCALNVFR-RGWIRAGKTVAVIGAGFI-GLLFLQLAAAAGARRVIAIDRRPARLALA 170

Query: 230 KEKLKGLGADEVFTE 244
           +E    LGA EV T+
Sbjct: 171 RE----LGATEVVTD 181

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 55.9 bits (135), Expect = 6e-09
 Identities = 65/260 (25%), Positives = 91/260 (35%), Gaps = 45/260 (17%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
            AVVY   G     +++ E PP      DV +++ A  I  SD++   G  P  P    +
Sbjct: 3   AAVVYVGGG----DVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDII 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS---------------------------- 140
            G+E VGEV  VG  V     GD V+  P                               
Sbjct: 59  LGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGG 117

Query: 141 ---GTWQSYV-VKDQSVWHKVSKDSPMEYAATIIVNPL-TALRMLEDFTTLNSGDSIVQN 195
              G +  YV V       K+      E AA  +  PL TA     +   +  G ++V  
Sbjct: 118 GIDGGFAEYVRVPADFNLAKLPDGIDEEAAA--LTEPLATAYHGHAERAAVRPGGTVVVV 175

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL 255
           GA  I G   I +A+  G   + I+ DR  S E  E  K  G  +V      +    + L
Sbjct: 176 GAGPI-GLLAIALAKLLGASVV-IVVDR--SPERLELAKEAGGADVVVNPSEDDAGAEIL 231

Query: 256 LANLPEPA-LGFNCVGGNSA 274
                  A +    VG   A
Sbjct: 232 ELTGGRGADVVIEAVGSPPA 251

Length = 350

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 55.7 bits (135), Expect = 7e-09
 Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 16/98 (16%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKEN-DVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA+VY   GP     +    P   ++E  D  VKML   I  +D++ ++G       VP 
Sbjct: 2   KALVYH--GPGKISWEDRPKP--TIQEPTDAIVKMLKTTICGTDLHILKG------DVPT 51

Query: 108 VG-----GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS 140
           V      G+EGVG V  VGSAVT    GD V+ S  SS
Sbjct: 52  VTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISS 89

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 55.4 bits (134), Expect = 7e-09
 Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA+VY   GP    I + E+P P     +D  V++ A  I  SD++   G  P   K   
Sbjct: 2   KALVYL--GPGK--IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVP-GAKHGM 56

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVI 134
           + G+E VGEV  VGS V RL PGD V 
Sbjct: 57  ILGHEFVGEVVEVGSDVKRLKPGDRVS 83

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 54.8 bits (133), Expect = 1e-08
 Identities = 64/249 (25%), Positives = 99/249 (39%), Gaps = 56/249 (22%)

Query: 63  IKMIELPPVEVKENDVCVKMLAAPINPSDIN-----RIEGVYPVRPKVPAVGGYEGVGEV 117
           +++ E P  E    +V V++ A  I  SD++     RI G + V+   P V G+E  G V
Sbjct: 10  LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRI-GDFVVKE--PMVLGHESAGTV 66

Query: 118 YSVGSAVTRLAPGDWV-----IP----------------------SPPSSGTWQSYVVKD 150
            +VGS VT L  GD V     +P                      +PP  GT   YV   
Sbjct: 67  VAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHP 126

Query: 151 QSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGATSIVGQCII 206
               HK+  +  +E  A  +V PL+    A R       +  GD+++  GA  I G    
Sbjct: 127 ADFCHKLPDNVSLEEGA--LVEPLSVGVHACRRAG----VRPGDTVLVFGAGPI-GLLTA 179

Query: 207 QIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVF----TESQLEVKNVKGLLANLPE 261
            +A+  G   + ++ D    D ++ E  K LGA         ++    + +  LL     
Sbjct: 180 AVAKAFGATKV-VVTDI---DPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLG-GKG 234

Query: 262 PALGFNCVG 270
           P +   C G
Sbjct: 235 PDVVIECTG 243

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 23/242 (9%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V E +    S+  +  LP  ++ E DV +++  + +N  D     G   V    P  
Sbjct: 2   KALVVEEQDGGVSL-FLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHT 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIP-----SPPSSGTWQSYV-VKDQSVW-HKVSKDS 161
            G +  G V  V S   R   GD V+         + G +  YV V   + W   + +  
Sbjct: 61  PGIDAAGTV--VSSDDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVP--ADWVVPLPEGL 116

Query: 162 PMEYAATIIVNPLTA----LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
            +  A  +     TA     R+ ++  T   G  +V  GAT  VG   + I    G +++
Sbjct: 117 SLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV-TGATGGVGSIAVAILAKLG-YTV 174

Query: 218 NIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKV 277
             +    G +E  + LK LGA EV     L  ++ K LL      A   + VGG+  + +
Sbjct: 175 VAL---TGKEEQADYLKSLGASEVLDREDLLDESKKPLLK--ARWAGAIDTVGGDVLANL 229

Query: 278 LK 279
           LK
Sbjct: 230 LK 231

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 45/245 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY--PVRPKVP 106
           +AV+    G  D ++   ++P       +V +++ A  +N +DIN  EG Y   V     
Sbjct: 2   RAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATD 61

Query: 107 AVGGYEG-----------------VGEVYSVGSAVTRLAPGDWVI-------PSPPSS-- 140
           + G  E                  VG V +VG  V     G+ V+       P       
Sbjct: 62  STGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD 121

Query: 141 ---------GTWQSY-VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGD 190
                    G +  Y VV  ++  + V+        AT   +  TA  MLE    + +G+
Sbjct: 122 IDYIGSERDGGFAEYTVVPAENA-YPVNSPLSDVELATFPCSYSTAENMLER-AGVGAGE 179

Query: 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK 250
           +++  GA+  VG  ++Q+A+ RG   I +    AG+ +  E ++ LGAD V       + 
Sbjct: 180 TVLVTGASGGVGSALVQLAKRRGAIVIAV----AGAAKE-EAVRALGADTVILRDAPLLA 234

Query: 251 NVKGL 255
           + K L
Sbjct: 235 DAKAL 239

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 46/229 (20%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------- 101
           A+  ER G P   I++ ++P  E+   +V V ++AA +N +++    G  PV        
Sbjct: 17  AIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALG-EPVSTFAARQR 75

Query: 102 --RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------------------PSSG 141
             R +   +GG +  G V++VG  V     GD V+                     PS  
Sbjct: 76  RGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQR 135

Query: 142 TW----------QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT--TLNSG 189
            W          Q  +V+   +  K    S  E AA ++V   TA RML  +   T+  G
Sbjct: 136 IWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGA-TAYRMLFGWNPNTVKPG 194

Query: 190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA 238
           D+++  GA+  +G   IQ+AR  G + + ++     S+E  E  + LGA
Sbjct: 195 DNVLIWGASGGLGSMAIQLARAAGANPVAVV----SSEEKAEYCRALGA 239

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 63  IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS 122
           +  IE P      ND  V+  A     SD++ + G  P       + G+E VG V  VGS
Sbjct: 12  VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERH-GMILGHEAVGVVEEVGS 70

Query: 123 AVTRLAPGDWVI 134
            V    PGD VI
Sbjct: 71  EVKDFKPGDRVI 82

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 11/93 (11%)

Query: 49  KAVVYEREGPPDS-------VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV 101
           +A V    G P         VI+ +EL P      +V VK+ AA +  SD++ I G  P 
Sbjct: 2   RAAVLRETGAPTPYADSRPLVIEEVELDPP--GPGEVLVKIAAAGLCHSDLSVINGDRP- 58

Query: 102 RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVI 134
           RP +P   G+E  G V  VG  VT L  GD V+
Sbjct: 59  RP-LPMALGHEAAGVVVEVGEGVTDLEVGDHVV 90

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 52.4 bits (126), Expect = 8e-08
 Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 22/199 (11%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           +K + + + G P+ V++ +E  P +  EN+V V+  A  IN  D     G+YP  P +P+
Sbjct: 2   AKRIEFHKHGGPE-VLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP-PSLPS 59

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPM---- 163
             G E  G V  VGS V  +  GD V+ +  + G + S         H V  D       
Sbjct: 60  GLGTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSV--------HNVPADKAAILPD 111

Query: 164 ----EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
               E AA   +  LT   +L     +   +  + + A   VG    Q A+  G   I  
Sbjct: 112 AISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGT 171

Query: 220 IRDRAGSDEAKEKLKGLGA 238
           +    GS +  ++ K  GA
Sbjct: 172 V----GSAQKAQRAKKAGA 186

Length = 327

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 52.2 bits (126), Expect = 8e-08
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 47/224 (20%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+V E+ G     ++++++P       +V V++    I  SD++   G  P     P +
Sbjct: 2   KALVCEKPG----RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRI 56

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------------GT 142
            G+E  GEV  VG  V  L  GD V+  P  S                          G 
Sbjct: 57  LGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGG 116

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGAT 198
           +  Y+V        V +   ++ AA  +V PL     A+R       + +GD+++  GA 
Sbjct: 117 FAEYIVVPAD-ALLVPEGLSLDQAA--LVEPLAIGAHAVRR----AGVTAGDTVLVVGAG 169

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
            I G  +IQ+A+ RG     I+ D    DE  E  + LGAD+  
Sbjct: 170 PI-GLGVIQVAKARGARV--IVVDI--DDERLEFARELGADDTI 208

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 52.2 bits (126), Expect = 8e-08
 Identities = 61/235 (25%), Positives = 85/235 (36%), Gaps = 55/235 (23%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG---VYPVRP-- 103
           KA  Y   G  D  I++ E+P   VK  +V +K+    I  SD++         P     
Sbjct: 2   KAARYH--GRKD--IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHP 57

Query: 104 -----KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------- 137
                  P   G+E  G V  VGS VT    GD V+  P                     
Sbjct: 58  HLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSL 117

Query: 138 ------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLN 187
                    G +  YVV      HK+  + P+E AA  +V PL     A+R         
Sbjct: 118 GFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAA--LVEPLAVAWHAVRRSG----FK 171

Query: 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
            GD+ +  GA  I G   I   +  G   I I+ +   S+  +E  + LGA  V 
Sbjct: 172 PGDTALVLGAGPI-GLLTILALKAAGASKI-IVSEP--SEARRELAEELGATIVL 222

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 52.2 bits (126), Expect = 9e-08
 Identities = 53/224 (23%), Positives = 77/224 (34%), Gaps = 39/224 (17%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA  + +      V+   E+P  E    +V VK+ AA +  SD++ ++G  P   K+P  
Sbjct: 2   KAWRFHKGSKGLLVL--EEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLT 59

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--------------------------SSGT 142
            G+E  G V  VG+ VT    GD V                                 G 
Sbjct: 60  LGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGG 119

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATI---IVNPLTALRMLEDFTTLNSGDSIVQNGATS 199
           +  Y+V        V    P   AA     ++ P  A+               V      
Sbjct: 120 FAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR----AGEVKPGETVLVIGLG 175

Query: 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT 243
            +G   +QIA+  G   I +       + AKE    LGADEV  
Sbjct: 176 GLGLNAVQIAKAMGAAVIAVDIKEEKLELAKE----LGADEVLN 215

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 36/122 (29%), Positives = 49/122 (40%), Gaps = 9/122 (7%)

Query: 94  RIEGVYPVRPKVPAVG--GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQ 151
            +EG+     K+P     GY  VG V  VGS VT   PGD V       G     VV   
Sbjct: 7   ALEGLSTGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF----CFGPHAERVVVPA 62

Query: 152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARH 211
           ++   +    P E AA   +   TAL  + D      G+ +   G   +VG    Q+A+ 
Sbjct: 63  NLLVPLPDGLPPERAALTALAA-TALNGVRD-AEPRLGERVAVVGL-GLVGLLAAQLAKA 119

Query: 212 RG 213
            G
Sbjct: 120 AG 121

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KA+V+   G  D  +++ E+P P      D  V++ A  I  SD++   G  P   K   
Sbjct: 2   KALVWH--GKGD--VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIP-GMKKGD 56

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWV-IPSPPSSGT 142
           + G+E +G V  VG  V  L  GD V +P   + G 
Sbjct: 57  ILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGE 92

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 37/247 (14%)

Query: 48  SKAVVYERE---GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPK 104
           +K  V ++     P +S  +++E     +K+ +V  + L   ++P    R    Y  R  
Sbjct: 3   AKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDP--YMR---PYSKRLN 57

Query: 105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVV---KDQSVWHKV---- 157
                    V +V  + S  ++   G  V+ S    G W+++ V   KDQ   +K+    
Sbjct: 58  EGDTMIGTQVAKV--IESKNSKFPVGTIVVAS---FG-WRTHTVSDGKDQPDLYKLPADL 111

Query: 158 SKDSPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHS 216
             D P   A  ++  P LTA   L +     +G+++V NGA   VG  + QIA+ +G   
Sbjct: 112 PDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKV 171

Query: 217 INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL-PEPALGFNC----VGG 271
           I      AGSD+    LK LG D VF     +  +++  L    P+   G +C    VGG
Sbjct: 172 IGC----AGSDDKVAWLKELGFDAVF---NYKTVSLEEALKEAAPD---GIDCYFDNVGG 221

Query: 272 NSASKVL 278
             +S VL
Sbjct: 222 EFSSTVL 228

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score = 50.6 bits (122), Expect = 3e-07
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 7/93 (7%)

Query: 49  KAVV-YEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR--PKV 105
           KA   YE   P     ++ ++P  E     V V++  A +  SD++ I+GV+      K+
Sbjct: 2   KAARLYEYGKPL----RLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKL 57

Query: 106 PAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP 138
           P   G+E  G V  VGS V  L  GD V+  PP
Sbjct: 58  PFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPP 90

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 50.2 bits (120), Expect = 5e-07
 Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 45/232 (19%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPIN----------PSDINRIEGVY 99
           A+  ER+G P   I++  +P  E+   +V V ++AA +N          P         Y
Sbjct: 12  AIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKY 71

Query: 100 PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPS-------PPSSGTWQSYVVKDQS 152
                   + G +  G V+ VG  VTR   GD V+ S        P        +  +Q 
Sbjct: 72  GKLDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQR 131

Query: 153 VW-----------HKVSKDSPM---------EYAATIIVNPLTALRMLEDFT--TLNSGD 190
           +W             + KD  +         E AA   +   TA R L  +    +  GD
Sbjct: 132 IWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPAAVKPGD 191

Query: 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEV 241
           +++  GA   +G    Q+AR  G + + ++     S   K E  + LGA+ V
Sbjct: 192 NVLIWGAAGGLGSYATQLARAGGGNPVAVV-----SSPEKAEYCRSLGAEAV 238

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 49.5 bits (119), Expect = 6e-07
 Identities = 68/243 (27%), Positives = 102/243 (41%), Gaps = 58/243 (23%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY------PVR 102
           KA+V  + GP     +++E+P  +    +V +K+LAA I  +D++    +Y        R
Sbjct: 2   KAIVKTKAGPG---AELVEVPVPKPGPGEVLIKVLAASICGTDVH----IYEWDEWAQSR 54

Query: 103 PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV--------------------------IPS 136
            K P + G+E  GEV  VG  VTR+  GD+V                          I  
Sbjct: 55  IKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG 114

Query: 137 PPSSGTWQSYV-VKDQSVWHKVSKDSPMEYAATIIVNPL-----TALRMLEDFTTLNSGD 190
             + G +  YV V ++++W K  KD P E A+  I  PL     T L          SG 
Sbjct: 115 VDTDGCFAEYVVVPEENLW-KNDKDIPPEIAS--IQEPLGNAVHTVL------AGDVSGK 165

Query: 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK 250
           S++  G   I G   I +A+  G   + I  D   +    E  K +GAD V    + +V 
Sbjct: 166 SVLITGCGPI-GLMAIAVAKAAGASLV-IASDP--NPYRLELAKKMGADVVINPREEDVV 221

Query: 251 NVK 253
            VK
Sbjct: 222 EVK 224

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 49.4 bits (119), Expect = 7e-07
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 21/95 (22%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI----------NRIEGV 98
           KA+V  +  P    + + ++P  E   NDV +K+    I  +D+            I   
Sbjct: 2   KALVKLKAEPG---LWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTI--- 55

Query: 99  YPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV 133
                 VP V G+E VGEV  VGS VT    GD V
Sbjct: 56  -----PVPMVVGHEFVGEVVEVGSEVTGFKVGDRV 85

Length = 341

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           KAVV++  GP D  +++ E+P P      D  VK+ AA I  SD++   G  P  P    
Sbjct: 2   KAVVFK--GPGD--VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTP--GF 55

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
           V G+E VGEV  VG  V  L  GD V+  
Sbjct: 56  VLGHEFVGEVVEVGPEVRTLKVGDRVVSP 84

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 57/244 (23%), Positives = 87/244 (35%), Gaps = 60/244 (24%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V +   PP   I+ I +P    KE ++ +++ A  +  SD++ ++G  P  P  P V
Sbjct: 2   KAAVLKGPNPP-LTIEEIPVPRP--KEGEILIRVAACGVCHSDLHVLKGELPFPP--PFV 56

Query: 109 GGYEGVGEVYSVGSAVT---RLAPGD-----WVIP------------------------- 135
            G+E  GEV  VG  V     L+ GD     +++P                         
Sbjct: 57  LGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLK 116

Query: 136 --------------SPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL 177
                           P    S G    Y V   +    + +      +A +     TA 
Sbjct: 117 GTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAY 176

Query: 178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG 237
             L+    +  G+++   G    VG   IQ+A+  G   I I  D    DE   K K LG
Sbjct: 177 GALKHAADVRPGETVAVIGVGG-VGSSAIQLAKAFGASPI-IAVDV--RDEKLAKAKELG 232

Query: 238 ADEV 241
           A   
Sbjct: 233 ATHT 236

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 60/265 (22%), Positives = 96/265 (36%), Gaps = 51/265 (19%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAV+         +    E+P  +  +++V +K+  A +   D+ +++G YP R K P +
Sbjct: 2   KAVILPGFKQGYRIE---EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP-RMKYPVI 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIP--------------------------SPPSSGT 142
            G+E VG V  VG  V    PGD V                                 G 
Sbjct: 58  LGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGF 117

Query: 143 WQSYVVKDQSVWHKVSKDSPME---YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 199
           +  Y     +   KV  +   E       +       LR       +  G++++  GA  
Sbjct: 118 FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAG----VKKGETVLVTGAGG 173

Query: 200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNVKGLLA 257
            VG   IQ+A+  G   I +      S E+K K+    AD V   S+   EVK + G   
Sbjct: 174 GVGIHAIQVAKALGAKVIAVT-----SSESKAKIVSKYADYVIVGSKFSEEVKKIGG--- 225

Query: 258 NLPEPALGFNCVGGNSASKVLKFLR 282
                 +    VG  +  + L+ L 
Sbjct: 226 ----ADIVIETVGTPTLEESLRSLN 246

Length = 334

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 46.8 bits (112), Expect = 6e-06
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA V    G P S+ ++   PP   K  +V +K+LA  +  +D   + G  P     P 
Sbjct: 3   CKAAVAWEAGKPLSIEEVEVAPP---KAGEVRIKILATGVCHTDAYTLSGADP-EGLFPV 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
           + G+EG G V SVG  VT + PGD VIP
Sbjct: 59  ILGHEGAGIVESVGEGVTSVKPGDHVIP 86

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 57/234 (24%), Positives = 92/234 (39%), Gaps = 48/234 (20%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           ++A V    G P   I+ + LP  +++   V V++  A +  SD++ + G  P  P +P 
Sbjct: 1   ARAAVLTGPGKP-LEIREVPLP--DLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVP-LPI 56

Query: 108 VGGYEGVGEVYSVGSAVTR------LAPGDWVI--------------------------- 134
           + G+EGVG V ++G  VT       L  GD V                            
Sbjct: 57  ILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY 116

Query: 135 ------PSPPSSGTWQSY-VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN 187
                   P  SG +  +  +   +   +V  + P E AA       T L  L+    + 
Sbjct: 117 GHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVG 176

Query: 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           +GD++V  GA   +G   +  A+  G   + I+ D  GS E  E  +  GAD  
Sbjct: 177 AGDTVVVQGA-GPLGLYAVAAAKLAGARRV-IVID--GSPERLELAREFGADAT 226

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 57/262 (21%), Positives = 97/262 (37%), Gaps = 58/262 (22%)

Query: 51  VVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSD------INRIEGVYPVRPK 104
           VV + E      +K   L   ++ E DV +++  + +N  D        +I   YP  P 
Sbjct: 5   VVEKDEDDVSVSVK--NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPG 62

Query: 105 VPAVG--------GYEGVGEV----YSVG-------SAVTRLAPGDWVIPSPPSSGTWQS 145
           +   G         ++   EV    Y +G       S   R+ P +WV+P P        
Sbjct: 63  IDLAGTVVESNDPRFKPGDEVIVTSYDLGVSHHGGYSEYARV-PAEWVVPLP-------- 113

Query: 146 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTA---LRMLEDFTTLNSGDSIVQNGATSIVG 202
                        K   ++ A  +     TA   +  LE+         ++  GAT  VG
Sbjct: 114 -------------KGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVG 160

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEP 262
              + I    G   +       G  +A + LK LGA EV    +L+ +++K L       
Sbjct: 161 SLAVSILAKLGYEVVA----STGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAG 216

Query: 263 ALGFNCVGGNSASKVLKFLRFR 284
           A+  + VGG + + +L  L++ 
Sbjct: 217 AV--DPVGGKTLAYLLSTLQYG 236

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 8/96 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           +A V    GP D  I++ E+P PV  +  D  ++++A  +  SD+    GV P R   P 
Sbjct: 2   RATVIH--GPGD--IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTRAPAPI 57

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVI-PSPPSSGT 142
             G+E VG V  VGS VT + PGD+VI P   S GT
Sbjct: 58  --GHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGT 91

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 63  IKMIELPPVEVKENDVCVKMLAAPINPSDIN--RIEGVYPVRPKVPAVGGYEGVGEVYSV 120
           +++ E P  E    +V V++ A  I  SD++  +  G   VR + P V G+E  G V +V
Sbjct: 9   LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAV 68

Query: 121 GSAVTRLAPGDWVIPSP 137
           G  VT LAPG  V  +P
Sbjct: 69  GPGVTGLAPGQRVAVNP 85

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 45/206 (21%)

Query: 77  DVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV--- 133
           DV +K++   I  +D+++I+    +    P V G+E VGEV  VGS V++   GD V   
Sbjct: 36  DVVIKVIYCGICHTDLHQIKNDLGMS-NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVG 94

Query: 134 -----------------------IPS--------PPSSGTWQSYVVKDQSVWHKVSKDSP 162
                                  I S         P+ G + S +V DQ    K+ +   
Sbjct: 95  VIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMA 154

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARHRGIHSINII 220
            E AA ++   +T    L  F    SG    I+  G    VG   ++IA+  G H + +I
Sbjct: 155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGG---VGHMGVKIAKAMG-HHVTVI 210

Query: 221 RDRAGSDEAKEK-LKGLGADEVFTES 245
              + SD+ +E+ L+ LGAD+    S
Sbjct: 211 ---SSSDKKREEALEHLGADDYLVSS 233

Length = 357

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 44.2 bits (105), Expect = 4e-05
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           AV +E   P   VI+ +E+ P +  E  V +K+L   +  +D+   E      P  P + 
Sbjct: 6   AVAWEAGKP--LVIEEVEVAPPQAME--VRIKILHTSLCHTDVYFWEAKGQT-PLFPRIL 60

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIP 135
           G+E  G V SVG  VT L PGD V+P
Sbjct: 61  GHEAAGIVESVGEGVTDLKPGDHVLP 86

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 43.6 bits (103), Expect = 6e-05
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V    G P  V++ I + P +  E  V +K+L   I  +D++  +G    +   P +
Sbjct: 12  KAAVAWGPGEP-LVMEEIRVDPPQKME--VRIKILYTSICHTDLSAWKGENEAQRAYPRI 68

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIP 135
            G+E  G V SVG  V  L  GD VIP
Sbjct: 69  LGHEAAGIVESVGEGVEDLKAGDHVIP 95

Length = 381

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 43.0 bits (102), Expect = 9e-05
 Identities = 56/228 (24%), Positives = 88/228 (38%), Gaps = 37/228 (16%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A VYE  G P   +++ E+P  E   + V V++ A  +  SD +  +G  P    +P V
Sbjct: 2   RAAVYEEFGEP---LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHV 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV--------------------------IPSPPSSGT 142
            G+E  G V  VG  V+R   GD V                           P     G+
Sbjct: 58  PGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGS 117

Query: 143 WQSYVVKDQSVWH--KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI 200
           +  YV   ++  +  ++  D     AA +     TA R L     +  G+ +  +G    
Sbjct: 118 FAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGG- 176

Query: 201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE 248
           VG   + IA   G   I +  D    D+  E  + LGA      S++E
Sbjct: 177 VGLSAVMIASALGARVIAV--DI--DDDKLELARELGAVATVNASEVE 220

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 14/90 (15%)

Query: 201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANL 259
           VG   +Q+A+  G   + I  DR  S+E  E  K LGAD V      + V+ V+ L    
Sbjct: 2   VGLAAVQLAKALGAARV-IAVDR--SEEKLELAKELGADHVINYRDEDFVERVRELT--- 55

Query: 260 PEPALG----FNCVGGNSASKV-LKFLRFR 284
                G     +CVG  +  +  L+ LR  
Sbjct: 56  --GGRGVDVVIDCVGAPATLEQALELLRPG 83

Length = 131

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 59  PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDIN--RIEGVYPVRPKVPAVGGYEGVGE 116
               ++        +  +DV +K+    +  SD++  R E      P VP   G+E VG 
Sbjct: 8   ASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVP---GHEIVGI 64

Query: 117 VYSVGSAVTRLAPGDWV 133
           V +VGS VT+   GD V
Sbjct: 65  VVAVGSKVTKFKVGDRV 81

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 14/93 (15%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI-----EGVYPVR 102
           S+A V    G P   +K+ E+     ++ +V V+++A  +  +D   +     EGV+PV 
Sbjct: 2   SRAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPV- 57

Query: 103 PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
                + G+EG G V +VG  VT +  GD VIP
Sbjct: 58  -----ILGHEGAGIVEAVGEGVTSVKVGDHVIP 85

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 143 WQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGA 197
           W S+ + D     K+  +     P+  A   +  P LTA   L +   +  G++++ N A
Sbjct: 88  WTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAA 147

Query: 198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA 257
              VG  + QIA+ +G   +      AGSDE    LK LG D  F       K VK L  
Sbjct: 148 AGAVGSVVGQIAKLKGCKVVGA----AGSDEKVAYLKKLGFDVAFN-----YKTVKSLEE 198

Query: 258 NLPEPAL-GFNC----VGGNSASKVLKFLR 282
            L + +  G++C    VGG  ++ V+  ++
Sbjct: 199 TLKKASPDGYDCYFDNVGGEFSNTVIGQMK 228

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 9/86 (10%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPA 107
             V E  GP + V + + LP       +V +K+ A  +  SD    EG  P    P+VP 
Sbjct: 4   VQVTEPGGPLELVERDVPLPG----PGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVP- 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWV 133
             G+E VG + +VG  V+R   GD V
Sbjct: 59  --GHEVVGRIDAVGEGVSRWKVGDRV 82

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 49/225 (21%), Positives = 85/225 (37%), Gaps = 32/225 (14%)

Query: 58  PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEV 117
           P D  +++ E P       +V +++ A+ +  SD++     +        + G+E  G V
Sbjct: 7   PGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVV 66

Query: 118 YSVGSAVTRLAPGDWVIP---------------------SPPSSGTWQS------YVVKD 150
            +VG  VT    GD V+                      S  ++  W        Y++  
Sbjct: 67  VAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVP 126

Query: 151 QSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIAR 210
           +     +  D      A ++    TA   L     ++  D+++  GA   VG   + +AR
Sbjct: 127 EKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGP-VGLGALMLAR 184

Query: 211 HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL 255
             G   + I  D   S E  E  K LGAD V    Q +V+ ++ L
Sbjct: 185 ALGAEDV-IGVDP--SPERLELAKALGADFVINSGQDDVQEIREL 226

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 9/83 (10%)

Query: 58  PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA-----VGGYE 112
           P    ++++++P  E    +V V+ L   +  +D   + G Y      P      V G+E
Sbjct: 8   PGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEY---GTAPPGEDFLVLGHE 64

Query: 113 GVGEVYSVGSAVTRLAPGDWVIP 135
            +G V  VG   + L+PGD V+P
Sbjct: 65  ALGVVEEVGDG-SGLSPGDLVVP 86

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 48/225 (21%), Positives = 82/225 (36%), Gaps = 47/225 (20%)

Query: 58  PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-----------PVRPKVP 106
            P   ++ +E+   +    +V VK+ A  +  SD++  +G Y               K+P
Sbjct: 8   EPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLP 67

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI---------------------PSPPSSGTWQ- 144
            V G+E VGEV +VG     +  GD V+                         + G +Q 
Sbjct: 68  LVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQD 127

Query: 145 ----SYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI 200
                YV+   S +           AAT+  + LTA   ++    L + + +V  GA   
Sbjct: 128 GGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGG- 186

Query: 201 VGQCIIQIAR---HRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
           +G   + + +      I  ++I       +   E  K  GAD V 
Sbjct: 187 LGLMALALLKALGPANIIVVDI------DEAKLEAAKAAGADVVV 225

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 47/213 (22%)

Query: 63  IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY------PVRPKVPAVGGYEGVGE 116
            ++ E+P  E    +V +K+LA  I  +D++    +Y        R K P V G+E  GE
Sbjct: 11  AELTEVPVPEPGPGEVLIKVLATSICGTDVH----IYNWDEWAQSRIKPPQVVGHEVAGE 66

Query: 117 VYSVGSAVTRLAPGDWV--------------------------IPSPPSSGTWQSY-VVK 149
           V  +G  V  +  GD+V                          I    + G +  Y VV 
Sbjct: 67  VVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVP 126

Query: 150 DQSVWHKVSKDSPMEYAATIIVNPL-TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208
            Q++W K  K  P EYA   I  PL  A+  +       SG S++  GA  I G   I +
Sbjct: 127 AQNIW-KNPKSIPPEYAT--IQEPLGNAVHTVLAGPI--SGKSVLVTGAGPI-GLMAIAV 180

Query: 209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           A+  G + + I+ D   ++   E  K +GA  V
Sbjct: 181 AKASGAYPV-IVSDP--NEYRLELAKKMGATYV 210

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 67  ELPPVEVKENDVCVKMLAAPINPSDINRIEG------VYPVRPKVPAVGGYEGVGEVYSV 120
           ++P   +K +++ +++ A  I  SDI+  E       +YP   + P V G+E  G V   
Sbjct: 43  DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKT 102

Query: 121 GSAVTRLAPGDWV 133
           G  V     GD V
Sbjct: 103 GKNVKNFEKGDPV 115

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           + V+   +G P  +  ++   P      +V V + A  +  +D++  EG   +  + P +
Sbjct: 3   RGVIARSKGAPVELETIVVPDP---GPGEVIVDIQACGVCHTDLHYREG--GINDEFPFL 57

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI 134
            G+E  G V +VG  VT +APGD+V+
Sbjct: 58  LGHEAAGVVEAVGEGVTDVAPGDYVV 83

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 63  IKMIELPPVEVKENDVCVKMLAAPINPSDINRIE----GVYPVRPKVPAVGGYEGVGEVY 118
           I+  +LPP+    +DV V+M A  I  SD++ ++      + V  K P V G+E  G + 
Sbjct: 31  IQPFKLPPL--GPHDVRVRMKAVGICGSDVHYLKTMRCADFVV--KEPMVIGHECAGIIE 86

Query: 119 SVGSAVTRLAPGDWVIPSP 137
            VGS V  L  GD V   P
Sbjct: 87  EVGSEVKHLVVGDRVALEP 105

Length = 364

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	288
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.98
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.98
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.98
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.98
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.98
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.98
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.98
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.97
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.97
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.97
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.97
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.97
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.97
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.97
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.97
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.97
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.97
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.97
PLN02702	364	L-idonate 5-dehydrogenase	99.97
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.97
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.97
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.97
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.97
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.97
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.96
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.95
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.94
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.91
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.9
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.74
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.45
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	98.98
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	98.62
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.34
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.16
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.14
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.99
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.97
PLN02494	477	adenosylhomocysteinase	97.94
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.78
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.78
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.75
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.74
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	97.72
PRK08324	681	short chain dehydrogenase; Validated	97.72
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.7
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.68
PRK07060	245	short chain dehydrogenase; Provisional	97.64
PRK12742	237	oxidoreductase; Provisional	97.62
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.58
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.57
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.55
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.51
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.5
PRK05693	274	short chain dehydrogenase; Provisional	97.49
PRK05993	277	short chain dehydrogenase; Provisional	97.48
PRK06182	273	short chain dehydrogenase; Validated	97.48
PRK06139	330	short chain dehydrogenase; Provisional	97.47
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.44
PRK12828	239	short chain dehydrogenase; Provisional	97.36
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.34
PRK05866	293	short chain dehydrogenase; Provisional	97.31
PLN03209	576	translocon at the inner envelope of chloroplast su	97.3
PRK09291	257	short chain dehydrogenase; Provisional	97.28
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.26
PRK05872	296	short chain dehydrogenase; Provisional	97.25
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.24
PRK06949	258	short chain dehydrogenase; Provisional	97.24
PRK06057	255	short chain dehydrogenase; Provisional	97.24
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.22
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.22
PRK06128	300	oxidoreductase; Provisional	97.21
PRK07478	254	short chain dehydrogenase; Provisional	97.21
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.21
PRK07806	248	short chain dehydrogenase; Provisional	97.2
PRK06125	259	short chain dehydrogenase; Provisional	97.2
PRK12367	245	short chain dehydrogenase; Provisional	97.19
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.19
PRK07831	262	short chain dehydrogenase; Provisional	97.18
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.15
PRK05876	275	short chain dehydrogenase; Provisional	97.15
PRK07109	334	short chain dehydrogenase; Provisional	97.14
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.14
PRK05867	253	short chain dehydrogenase; Provisional	97.12
PRK08339	263	short chain dehydrogenase; Provisional	97.12
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.1
PRK06172	253	short chain dehydrogenase; Provisional	97.1
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	97.1
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.1
PRK08017	256	oxidoreductase; Provisional	97.1
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.1
PRK06196	315	oxidoreductase; Provisional	97.09
PRK06194	287	hypothetical protein; Provisional	97.09
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.09
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.08
PRK12939	250	short chain dehydrogenase; Provisional	97.08
PRK05854	313	short chain dehydrogenase; Provisional	97.07
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.06
PRK07062	265	short chain dehydrogenase; Provisional	97.06
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.05
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.05
PRK06483	236	dihydromonapterin reductase; Provisional	97.03
PRK12829	264	short chain dehydrogenase; Provisional	97.03
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.02
PRK08589	272	short chain dehydrogenase; Validated	97.01
PRK06180	277	short chain dehydrogenase; Provisional	97.0
PRK07825	273	short chain dehydrogenase; Provisional	97.0
PRK07814	263	short chain dehydrogenase; Provisional	97.0
PRK08264	238	short chain dehydrogenase; Validated	96.99
PRK08177	225	short chain dehydrogenase; Provisional	96.98
PRK06181	263	short chain dehydrogenase; Provisional	96.98
PRK06841	255	short chain dehydrogenase; Provisional	96.98
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.97
PRK07677	252	short chain dehydrogenase; Provisional	96.96
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.95
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.95
PRK07890	258	short chain dehydrogenase; Provisional	96.94
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.94
PRK07904	253	short chain dehydrogenase; Provisional	96.93
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.93
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.93
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.92
PRK07576	264	short chain dehydrogenase; Provisional	96.92
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.92
PRK06500	249	short chain dehydrogenase; Provisional	96.92
PRK06914	280	short chain dehydrogenase; Provisional	96.91
PRK07063	260	short chain dehydrogenase; Provisional	96.91
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.91
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.91
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.9
PRK08267	260	short chain dehydrogenase; Provisional	96.9
PRK08643	256	acetoin reductase; Validated	96.89
PRK07774	250	short chain dehydrogenase; Provisional	96.89
PRK09072	263	short chain dehydrogenase; Provisional	96.89
PRK07326	237	short chain dehydrogenase; Provisional	96.89
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.88
PRK07791	286	short chain dehydrogenase; Provisional	96.88
PRK08703	239	short chain dehydrogenase; Provisional	96.88
PRK06197	306	short chain dehydrogenase; Provisional	96.87
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.87
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.87
PRK07454	241	short chain dehydrogenase; Provisional	96.87
PRK06138	252	short chain dehydrogenase; Provisional	96.87
PRK08862	227	short chain dehydrogenase; Provisional	96.86
PRK08628	258	short chain dehydrogenase; Provisional	96.86
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.85
PRK06179	270	short chain dehydrogenase; Provisional	96.84
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.84
PRK06114	254	short chain dehydrogenase; Provisional	96.84
PRK07832	272	short chain dehydrogenase; Provisional	96.84
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.83
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.83
PRK08265	261	short chain dehydrogenase; Provisional	96.82
PRK07035	252	short chain dehydrogenase; Provisional	96.81
PLN02253	280	xanthoxin dehydrogenase	96.81
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.8
PRK08303	305	short chain dehydrogenase; Provisional	96.8
PLN02780	320	ketoreductase/ oxidoreductase	96.8
PRK05717	255	oxidoreductase; Validated	96.79
PRK06720	169	hypothetical protein; Provisional	96.79
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.77
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.77
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.77
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.76
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.76
PRK07024	257	short chain dehydrogenase; Provisional	96.75
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.74
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	96.74
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.74
PRK06198	260	short chain dehydrogenase; Provisional	96.72
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	96.72
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.71
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.71
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.7
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.7
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.7
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.69
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.69
KOG0725	270	consensus Reductases with broad range of substrate	96.69
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.69
PRK07856	252	short chain dehydrogenase; Provisional	96.67
PRK06482	276	short chain dehydrogenase; Provisional	96.67
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.66
PRK08219	227	short chain dehydrogenase; Provisional	96.66
PRK08263	275	short chain dehydrogenase; Provisional	96.65
PRK09186	256	flagellin modification protein A; Provisional	96.64
PRK06398	258	aldose dehydrogenase; Validated	96.64
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.64
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.64
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.64
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.64
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.63
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.63
PRK09242	257	tropinone reductase; Provisional	96.62
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	96.62
CHL00194	317	ycf39 Ycf39; Provisional	96.6
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.59
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.58
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.58
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.57
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.55
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	96.54
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	96.53
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.52
PRK12743	256	oxidoreductase; Provisional	96.52
PRK08226	263	short chain dehydrogenase; Provisional	96.52
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.5
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.49
PRK06953	222	short chain dehydrogenase; Provisional	96.49
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.49
PRK05650	270	short chain dehydrogenase; Provisional	96.47
PRK06484	520	short chain dehydrogenase; Validated	96.47
PRK07775	274	short chain dehydrogenase; Provisional	96.46
PRK08251	248	short chain dehydrogenase; Provisional	96.46
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.45
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.45
PRK07067	257	sorbitol dehydrogenase; Provisional	96.45
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.45
PRK05875	276	short chain dehydrogenase; Provisional	96.42
PRK06523	260	short chain dehydrogenase; Provisional	96.39
PRK08278	273	short chain dehydrogenase; Provisional	96.37
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.37
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	96.35
PRK09135	249	pteridine reductase; Provisional	96.34
PRK06701	290	short chain dehydrogenase; Provisional	96.33
PRK09134	258	short chain dehydrogenase; Provisional	96.32
PRK07074	257	short chain dehydrogenase; Provisional	96.32
PRK06484	520	short chain dehydrogenase; Validated	96.31
PLN02896	353	cinnamyl-alcohol dehydrogenase	96.3
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.3
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.29
PRK12937	245	short chain dehydrogenase; Provisional	96.28
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.27
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.26
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	96.26
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.24
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	96.24
PRK05884	223	short chain dehydrogenase; Provisional	96.24
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.23
PRK07985	294	oxidoreductase; Provisional	96.22
PRK12744	257	short chain dehydrogenase; Provisional	96.21
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.2
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.2
KOG1208	314	consensus Dehydrogenases with different specificit	96.2
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.18
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	96.18
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.18
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	96.16
PRK07102	243	short chain dehydrogenase; Provisional	96.16
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	96.16
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.16
PRK05855	582	short chain dehydrogenase; Validated	96.16
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.15
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.14
PRK06101	240	short chain dehydrogenase; Provisional	96.14
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.14
PRK05599	246	hypothetical protein; Provisional	96.13
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.13
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.13
PRK10538	248	malonic semialdehyde reductase; Provisional	96.12
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.11
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.1
PRK12747	252	short chain dehydrogenase; Provisional	96.07
PRK12746	254	short chain dehydrogenase; Provisional	96.06
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.06
PRK07041	230	short chain dehydrogenase; Provisional	96.06
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.05
PLN02240	352	UDP-glucose 4-epimerase	96.05
PLN02686	367	cinnamoyl-CoA reductase	96.04
PRK07201	657	short chain dehydrogenase; Provisional	96.04
PRK06940	275	short chain dehydrogenase; Provisional	96.03
PRK12827	249	short chain dehydrogenase; Provisional	96.02
PLN02427	386	UDP-apiose/xylose synthase	95.99
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.99
PRK12824	245	acetoacetyl-CoA reductase; Provisional	95.99
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	95.98
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.98
PRK06123	248	short chain dehydrogenase; Provisional	95.98
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.95
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	95.91
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.91
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.9
COG2910	211	Putative NADH-flavin reductase [General function p	95.9
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	95.87
PRK04148	134	hypothetical protein; Provisional	95.87
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	95.86
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	95.85
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	95.85
PLN02214	342	cinnamoyl-CoA reductase	95.84
PLN00198	338	anthocyanidin reductase; Provisional	95.82
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	95.82
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.81
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.81
PLN02650	351	dihydroflavonol-4-reductase	95.81
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.8
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.78
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.76
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	95.75
PLN02653	340	GDP-mannose 4,6-dehydratase	95.73
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.69
TIGR00438	188	rrmJ cell division protein FtsJ.	95.69
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	95.66
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.66
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	95.62
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.62
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.61
PRK08328	231	hypothetical protein; Provisional	95.61
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.61
PRK10675	338	UDP-galactose-4-epimerase; Provisional	95.58
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.58
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.55
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	95.54
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.52
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.52
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.52
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.52
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	95.51
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.5
PRK07577	234	short chain dehydrogenase; Provisional	95.49
PRK07069	251	short chain dehydrogenase; Validated	95.46
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	95.45
PLN02366	308	spermidine synthase	95.45
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.43
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.42
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.41
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.37
PLN02583	297	cinnamoyl-CoA reductase	95.34
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.34
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.32
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.28
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.27
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	95.24
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	95.24
PRK11207	197	tellurite resistance protein TehB; Provisional	95.2
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.18
cd05313	254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	95.16
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.15
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.14
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.13
PLN02695	370	GDP-D-mannose-3',5'-epimerase	95.07
PRK07402	196	precorrin-6B methylase; Provisional	95.07
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.06
COG4122	219	Predicted O-methyltransferase [General function pr	95.05
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	95.05
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.03
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.03
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.02
PLN02928	347	oxidoreductase family protein	95.01
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.0
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	94.99
PRK01581	374	speE spermidine synthase; Validated	94.97
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.96
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.95
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	94.94
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	94.9
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.87
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.86
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.84
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.84
PLN03075	296	nicotianamine synthase; Provisional	94.83
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	94.8
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	94.8
COG1028	251	FabG Dehydrogenases with different specificities (	94.75
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	94.73
PLN02476	278	O-methyltransferase	94.73
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.7
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.63
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	94.61
KOG1252	362	consensus Cystathionine beta-synthase and related	94.6
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	94.6
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.58
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	94.58
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.56
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	94.54
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.53
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.52
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	94.5
PRK00536	262	speE spermidine synthase; Provisional	94.5
PRK07578	199	short chain dehydrogenase; Provisional	94.47
PRK07574	385	formate dehydrogenase; Provisional	94.46
TIGR00243	389	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	94.44
PRK07023	243	short chain dehydrogenase; Provisional	94.44
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	94.43
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.4
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	94.37
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.36
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	94.35
PRK08317	241	hypothetical protein; Provisional	94.35
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.34
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.32
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.32
PRK14030	445	glutamate dehydrogenase; Provisional	94.3
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.29
PRK08223	287	hypothetical protein; Validated	94.27
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	94.25
PLN00016	378	RNA-binding protein; Provisional	94.19
PRK08300	302	acetaldehyde dehydrogenase; Validated	94.18
PLN02696	454	1-deoxy-D-xylulose-5-phosphate reductoisomerase	94.17
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.14
PLN03139	386	formate dehydrogenase; Provisional	94.12
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	94.1
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	94.09

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=8.5e-46  Score=328.04  Aligned_cols=235  Identities=31%  Similarity=0.394  Sum_probs=218.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+.+.++. ++++|.|.|.+.++||+|||.++++|+.|...+.|......++|.++|.|++|+|+++|+++++|
T Consensus         1 mka~~~~~~g~~~~-l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~   79 (326)
T COG0604           1 MKAVVVEEFGGPEV-LKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGF   79 (326)
T ss_pred             CeEEEEeccCCCce-eEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCc
Confidence            68999999999877 99999999999999999999999999999999998744444689999999999999999999999


Q ss_pred             CCCCEEEecC-C-CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHH
Q 023007          128 APGDWVIPSP-P-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (288)
Q Consensus       128 ~~Gd~V~~~~-~-~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a  205 (288)
                      ++||+|+... . ..|+|+||..+|++.++++|+++++++||++++.++|||++++...++++|++|||+|++|++|+++
T Consensus        80 ~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~a  159 (326)
T COG0604          80 KVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAA  159 (326)
T ss_pred             CCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHH
Confidence            9999999984 2 2599999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCC
Q 023007          206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR  284 (288)
Q Consensus       206 ~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~  284 (288)
                      +|+|+++|+++++++    .++++.++++++|+++++++++. +.+.+++++++++ +|+|||++|++.+..++++|+++
T Consensus       160 iQlAk~~G~~~v~~~----~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~g-vDvv~D~vG~~~~~~~l~~l~~~  234 (326)
T COG0604         160 IQLAKALGATVVAVV----SSSEKLELLKELGADHVINYREEDFVEQVRELTGGKG-VDVVLDTVGGDTFAASLAALAPG  234 (326)
T ss_pred             HHHHHHcCCcEEEEe----cCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCC-ceEEEECCCHHHHHHHHHHhccC
Confidence            999999998877777    57777789999999999998876 5688999999977 99999999999999999999999


Q ss_pred             CeeC
Q 023007          285 EEQW  288 (288)
Q Consensus       285 G~~v  288 (288)
                      |+++
T Consensus       235 G~lv  238 (326)
T COG0604         235 GRLV  238 (326)
T ss_pred             CEEE
Confidence            9985

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=6.6e-45  Score=316.33  Aligned_cols=228  Identities=29%  Similarity=0.363  Sum_probs=208.6

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      +.+||++++++++.+   +++.+++.|+|.++||+|+|.|+|+|++|++.+.|..+.. .+|.++|||.+|+|+++|++|
T Consensus         1 ~~~mkA~~~~~~~~p---l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~-~~P~ipGHEivG~V~~vG~~V   76 (339)
T COG1064           1 MMTMKAAVLKKFGQP---LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP-KLPLIPGHEIVGTVVEVGEGV   76 (339)
T ss_pred             CcceEEEEEccCCCC---ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC-CCCccCCcceEEEEEEecCCC
Confidence            357999999999997   8899999999999999999999999999999999998876 599999999999999999999


Q ss_pred             CCCCCCCEEEe-cCCC--------------------------CcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHH
Q 023007          125 TRLAPGDWVIP-SPPS--------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL  177 (288)
Q Consensus       125 ~~~~~Gd~V~~-~~~~--------------------------~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~  177 (288)
                      ++|++||+|.. +...                          +|+|+||+++|+++++++|+++++.+||.+.+++.|.|
T Consensus        77 ~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y  156 (339)
T COG1064          77 TGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY  156 (339)
T ss_pred             ccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence            99999999988 3311                          99999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHh
Q 023007          178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLL  256 (288)
Q Consensus       178 ~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~  256 (288)
                      ++|++ .+++||++|+|+|. |++|.+++|+|+++|++|+++.    .++++.+.+++||++++++..+.+ .+.+++  
T Consensus       157 ~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~----~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~--  228 (339)
T COG1064         157 RALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAIT----RSEEKLELAKKLGADHVINSSDSDALEAVKE--  228 (339)
T ss_pred             eehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEe----CChHHHHHHHHhCCcEEEEcCCchhhHHhHh--
Confidence            99987 99999999999999 7999999999999999999999    689999999999999999987432 334433  


Q ss_pred             cCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          257 ANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                          .+|+++|+++...++.+++.|+++|++|
T Consensus       229 ----~~d~ii~tv~~~~~~~~l~~l~~~G~~v  256 (339)
T COG1064         229 ----IADAIIDTVGPATLEPSLKALRRGGTLV  256 (339)
T ss_pred             ----hCcEEEECCChhhHHHHHHHHhcCCEEE
Confidence                2999999999555599999999999985

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=4.3e-40  Score=269.16  Aligned_cols=236  Identities=25%  Similarity=0.305  Sum_probs=221.3

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      |...|.+++++.|..+ ++++++.|.|+|.++|++||..|+|+|+.|.....|-+. .++.|.++|.|.+|+|+++|+++
T Consensus         6 p~~~k~i~v~e~Ggyd-vlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~gv   83 (336)
T KOG1197|consen    6 PPLLKCIVVTEFGGYD-VLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEGV   83 (336)
T ss_pred             CchheEEEEeccCCcc-eEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCCc
Confidence            4456889999988875 599999999999999999999999999999999999885 34789999999999999999999


Q ss_pred             CCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHH
Q 023007          125 TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC  204 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~  204 (288)
                      +++++||+|+-+.+ .|.|+++..+|...+.++|+.+++.+||++.+.++|||..+++..++++|++|||+.++|++|++
T Consensus        84 tdrkvGDrVayl~~-~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGll  162 (336)
T KOG1197|consen   84 TDRKVGDRVAYLNP-FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLL  162 (336)
T ss_pred             cccccccEEEEecc-chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHH
Confidence            99999999998875 69999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccC
Q 023007          205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF  283 (288)
Q Consensus       205 a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~  283 (288)
                      +.|+++..|+.+|.++    ++.++.+.+++-|+.|.++++.++ ++++...|++.| +|+++|.+|.+.+..++.+|++
T Consensus       163 l~Ql~ra~~a~tI~~a----sTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKG-Vd~vyDsvG~dt~~~sl~~Lk~  237 (336)
T KOG1197|consen  163 LCQLLRAVGAHTIATA----STAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKG-VDAVYDSVGKDTFAKSLAALKP  237 (336)
T ss_pred             HHHHHHhcCcEEEEEe----ccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCC-ceeeeccccchhhHHHHHHhcc
Confidence            9999999999999999    689999999999999999998765 689999999987 9999999999999999999999


Q ss_pred             CCeeC
Q 023007          284 REEQW  288 (288)
Q Consensus       284 ~G~~v  288 (288)
                      .|.+|
T Consensus       238 ~G~mV  242 (336)
T KOG1197|consen  238 MGKMV  242 (336)
T ss_pred             CceEE
Confidence            99875

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.6e-40  Score=279.94  Aligned_cols=233  Identities=23%  Similarity=0.254  Sum_probs=203.2

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCC--CCCcccccceEEEEEEec
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~~G  121 (288)
                      ..+|+++++.+.++    +++++.|.|++ .|+||+|++.++|||++|.+.+.......+  +.|.++|||.+|+|+++|
T Consensus         2 ~~~~~A~vl~g~~d----i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG   77 (354)
T KOG0024|consen    2 AADNLALVLRGKGD----IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVG   77 (354)
T ss_pred             CcccceeEEEccCc----eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhc
Confidence            45789999999998    88999999986 999999999999999999999986543332  579999999999999999


Q ss_pred             CCCCCCCCCCEEEecCCC---------------------------CcccceEEEeeCCcEEEcCCCCChhhhcccccchH
Q 023007          122 SAVTRLAPGDWVIPSPPS---------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL  174 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~~~---------------------------~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~  174 (288)
                      ++|+++++||||+.-+..                           +|++++|++.+++.++|+|++++++++|.+. +++
T Consensus        78 ~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLs  156 (354)
T KOG0024|consen   78 DEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLS  156 (354)
T ss_pred             ccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chh
Confidence            999999999999987632                           8999999999999999999999999999988 699


Q ss_pred             HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHH--
Q 023007          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKN--  251 (288)
Q Consensus       175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~--  251 (288)
                      .+||+.++ +++++|++|||+|+ |++|+++...|+.+|+.-+++++   ..++|++.+++||++.+.+..... .+.  
T Consensus       157 V~~HAcr~-~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d---~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~  231 (354)
T KOG0024|consen  157 VGVHACRR-AGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITD---LVANRLELAKKFGATVTDPSSHKSSPQELA  231 (354)
T ss_pred             hhhhhhhh-cCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEee---cCHHHHHHHHHhCCeEEeeccccccHHHHH
Confidence            99999976 99999999999999 99999999999999997666665   589999999999999987765432 333  


Q ss_pred             --HHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          252 --VKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       252 --i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                        +....+... +|+.|||+|.+.. +.++..++.+|.+|
T Consensus       232 ~~v~~~~g~~~-~d~~~dCsG~~~~~~aai~a~r~gGt~v  270 (354)
T KOG0024|consen  232 ELVEKALGKKQ-PDVTFDCSGAEVTIRAAIKATRSGGTVV  270 (354)
T ss_pred             HHHHhhccccC-CCeEEEccCchHHHHHHHHHhccCCEEE
Confidence              333333333 9999999999887 99999999999864

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=6.4e-39  Score=273.77  Aligned_cols=231  Identities=26%  Similarity=0.346  Sum_probs=213.2

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ++|+.+..++++|   ++++++..++|+++||+||+.++|+|++|....+|..+..  +|.++|||++|+|+++|++|++
T Consensus         2 k~~aAV~~~~~~P---l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--~P~vLGHEgAGiVe~VG~gVt~   76 (366)
T COG1062           2 KTRAAVAREAGKP---LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG--FPAVLGHEGAGIVEAVGEGVTS   76 (366)
T ss_pred             CceEeeeecCCCC---eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC--CceecccccccEEEEecCCccc
Confidence            4688999999988   8999999999999999999999999999999999998874  8999999999999999999999


Q ss_pred             CCCCCEEEecCCC-----------------------------------------------CcccceEEEeeCCcEEEcCC
Q 023007          127 LAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHKVSK  159 (288)
Q Consensus       127 ~~~Gd~V~~~~~~-----------------------------------------------~G~~a~~~~~~~~~l~~ip~  159 (288)
                      ++|||+|+..+.-                                               .++|++|.++++..++|+++
T Consensus        77 vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~  156 (366)
T COG1062          77 VKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDP  156 (366)
T ss_pred             cCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCC
Confidence            9999999987641                                               45899999999999999999


Q ss_pred             CCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD  239 (288)
Q Consensus       160 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~  239 (288)
                      +.+++.++.+.+...|.+.+..+.+++++|++|.|+|. |++|++++|-|+..|+..|+.++   .+++|++++++||++
T Consensus       157 ~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD---~~~~Kl~~A~~fGAT  232 (366)
T COG1062         157 DAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVD---INPEKLELAKKFGAT  232 (366)
T ss_pred             CCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEe---CCHHHHHHHHhcCCc
Confidence            99999999999999999999999999999999999999 99999999999999997777766   589999999999999


Q ss_pred             EEEeCCcc--cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          240 EVFTESQL--EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       240 ~v~~~~~~--~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +++|..+.  -++.+.++|++  ++|.+|||+|+... ++++++..++|+.|
T Consensus       233 ~~vn~~~~~~vv~~i~~~T~g--G~d~~~e~~G~~~~~~~al~~~~~~G~~v  282 (366)
T COG1062         233 HFVNPKEVDDVVEAIVELTDG--GADYAFECVGNVEVMRQALEATHRGGTSV  282 (366)
T ss_pred             eeecchhhhhHHHHHHHhcCC--CCCEEEEccCCHHHHHHHHHHHhcCCeEE
Confidence            99999876  35789999997  49999999999776 99999999999864

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=4.7e-38  Score=285.84  Aligned_cols=235  Identities=23%  Similarity=0.281  Sum_probs=205.8

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      .+.+||++++.+++.+   +.+++.+.|++.++||+|||.++++|++|++.+.|..+....+|.++|||++|+|+++|++
T Consensus         7 ~~~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~   83 (381)
T PLN02740          7 KVITCKAAVAWGPGEP---LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG   83 (381)
T ss_pred             cceeeEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence            4568999999987753   6788999999999999999999999999999998875443456899999999999999999


Q ss_pred             CCCCCCCCEEEecCC--------------------------------------------------CCcccceEEEeeCCc
Q 023007          124 VTRLAPGDWVIPSPP--------------------------------------------------SSGTWQSYVVKDQSV  153 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~--------------------------------------------------~~G~~a~~~~~~~~~  153 (288)
                      +++|++||+|++.+.                                                  ..|+|+||++++.+.
T Consensus        84 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~  163 (381)
T PLN02740         84 VEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSAC  163 (381)
T ss_pred             CCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHH
Confidence            999999999987531                                                  148999999999999


Q ss_pred             EEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHH
Q 023007          154 WHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEK  232 (288)
Q Consensus       154 l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~  232 (288)
                      ++++|+++++++++.+++++.|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++.    .++++++.
T Consensus       164 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~----~~~~r~~~  238 (381)
T PLN02740        164 VVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVD----INPEKFEK  238 (381)
T ss_pred             eEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEc----CChHHHHH
Confidence            99999999999999999999999999887789999999999997 9999999999999999 577776    57889999


Q ss_pred             HHhCCCCEEEeCCcc---cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007          233 LKGLGADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW  288 (288)
Q Consensus       233 ~~~~g~~~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v  288 (288)
                      ++++|+++++++++.   ..+.+.+++++ + +|++|||+|+.. +..++++++++ |++|
T Consensus       239 a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g-~dvvid~~G~~~~~~~a~~~~~~g~G~~v  297 (381)
T PLN02740        239 GKEMGITDFINPKDSDKPVHERIREMTGG-G-VDYSFECAGNVEVLREAFLSTHDGWGLTV  297 (381)
T ss_pred             HHHcCCcEEEecccccchHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHhhhcCCCEEE
Confidence            999999999987653   34667777776 5 999999999865 59999999996 9874

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=4.4e-38  Score=285.12  Aligned_cols=232  Identities=24%  Similarity=0.285  Sum_probs=204.3

Q ss_pred             ceEEEEccCCCC-----CcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007           48 SKAVVYEREGPP-----DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        48 ~~a~~~~~~g~~-----~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      ||++++.++|.+     .+.+++++.|.|++.++||+|||.++++|++|++.+.|.++.  .+|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~   78 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE   78 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence            789999988754     355899999999999999999999999999999999886543  4688999999999999999


Q ss_pred             CCCCCCCCCEEEecCCC-----------------------------------------------CcccceEEEeeCCcEE
Q 023007          123 AVTRLAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWH  155 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~~-----------------------------------------------~G~~a~~~~~~~~~l~  155 (288)
                      ++++|++||+|++.+..                                               .|+|+||+.++.+.++
T Consensus        79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence            99999999999874210                                               1689999999999999


Q ss_pred             EcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHH
Q 023007          156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK  234 (288)
Q Consensus       156 ~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~  234 (288)
                      ++|+++++++++.++++++|||+++...+++++|++|+|.|+ |++|++++|+|+.+|+ +|+++.    .++++++.++
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~----~~~~r~~~a~  233 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVD----LNEDKLALAR  233 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc----CCHHHHHHHH
Confidence            999999999999999999999999887789999999999997 9999999999999999 577776    5889999999


Q ss_pred             hCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          235 GLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       235 ~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      ++|+++++++++. ..+.+++++++ + +|++|||+|... .+.++++++++|+++
T Consensus       234 ~~Ga~~~i~~~~~~~~~~i~~~~~~-g-~d~vid~~G~~~~~~~~~~~l~~~G~iv  287 (371)
T cd08281         234 ELGATATVNAGDPNAVEQVRELTGG-G-VDYAFEMAGSVPALETAYEITRRGGTTV  287 (371)
T ss_pred             HcCCceEeCCCchhHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHHHhcCCEEE
Confidence            9999999998754 35677778776 4 999999999754 499999999999985

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=6e-38  Score=282.98  Aligned_cols=231  Identities=20%  Similarity=0.251  Sum_probs=204.3

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      |||++++++++.+   +++++.|.|++.++||+|||.++++|++|++.+.|..+.  .+|.++|||++|+|+++|+++++
T Consensus         1 ~mka~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~   75 (358)
T TIGR03451         1 TVRGVIARSKGAP---VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTD   75 (358)
T ss_pred             CcEEEEEccCCCC---CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcc
Confidence            6899999998875   788999999999999999999999999999988876432  45889999999999999999999


Q ss_pred             CCCCCEEEecCC---------------------------------------CCcccceEEEeeCCcEEEcCCCCChhhhc
Q 023007          127 LAPGDWVIPSPP---------------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAA  167 (288)
Q Consensus       127 ~~~Gd~V~~~~~---------------------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa  167 (288)
                      |++||+|++.+.                                       ..|+|+||+.++...++++|+++++++++
T Consensus        76 ~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa  155 (358)
T TIGR03451        76 VAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAG  155 (358)
T ss_pred             cCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhh
Confidence            999999986321                                       14899999999999999999999999999


Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~  246 (288)
                      .+++.+.++|+++.+.+.+++|++|||+|+ |++|++++|+|+.+|++ |+++.    .++++.++++++|+++++++++
T Consensus       156 ~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~----~~~~~~~~~~~~Ga~~~i~~~~  230 (358)
T TIGR03451       156 LLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVD----IDDRKLEWAREFGATHTVNSSG  230 (358)
T ss_pred             hhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCCceEEcCCC
Confidence            999999999999888788999999999986 99999999999999996 77766    5789999999999999998876


Q ss_pred             c-cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          247 L-EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       247 ~-~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      . ..+.+.+++++.+ +|++|||+|++. .+.++++++++|++|
T Consensus       231 ~~~~~~i~~~~~~~g-~d~vid~~g~~~~~~~~~~~~~~~G~iv  273 (358)
T TIGR03451       231 TDPVEAIRALTGGFG-ADVVIDAVGRPETYKQAFYARDLAGTVV  273 (358)
T ss_pred             cCHHHHHHHHhCCCC-CCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence            4 3467788887766 999999999854 488999999999985

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=6.6e-38  Score=280.58  Aligned_cols=230  Identities=22%  Similarity=0.274  Sum_probs=202.2

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++++++.    +++++.|.|++.++||+||+.++++|++|.+.+.+.+......|.++|||++|+|+++|+++++|
T Consensus         1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   76 (339)
T cd08239           1 MRGAVFPGDRT----VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHF   76 (339)
T ss_pred             CeEEEEecCCc----eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccC
Confidence            68999987654    89999999999999999999999999999998876543222347899999999999999999999


Q ss_pred             CCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|+..+.                           ..|+|++|+.++.+.++++|+++++.+++.+++++.|||+++
T Consensus        77 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l  156 (339)
T cd08239          77 RVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL  156 (339)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence            99999987641                           158999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCC
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL  259 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~  259 (288)
                      .. ..+++|++|+|+|+ |++|++++|+++.+|++ ++++.    .++++.+.++++|+++++++++...+.+.+++++.
T Consensus       157 ~~-~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~----~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~  230 (339)
T cd08239         157 RR-VGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVD----PSPERLELAKALGADFVINSGQDDVQEIRELTSGA  230 (339)
T ss_pred             Hh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCC
Confidence            65 78899999999987 99999999999999999 88776    57889999999999999998764456677777766


Q ss_pred             CCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      + +|++|||+|+... +.++++++++|+++
T Consensus       231 ~-~d~vid~~g~~~~~~~~~~~l~~~G~~v  259 (339)
T cd08239         231 G-ADVAIECSGNTAARRLALEAVRPWGRLV  259 (339)
T ss_pred             C-CCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence            5 9999999999876 88999999999985

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=4.3e-38  Score=261.67  Aligned_cols=248  Identities=51%  Similarity=0.818  Sum_probs=224.4

Q ss_pred             ccCCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEe
Q 023007           41 SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (288)
Q Consensus        41 ~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~  120 (288)
                      +..++...|+++++..|+|.+++++++.+.|....++|+||.+++.|||+|+..+.|.|+.++++|.+-|.|++|+|+.+
T Consensus        13 a~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~v   92 (354)
T KOG0025|consen   13 ASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAV   92 (354)
T ss_pred             ccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEe
Confidence            44567778999999999999999999999999888889999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCCh
Q 023007          121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI  200 (288)
Q Consensus       121 G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~  200 (288)
                      |+++.+|++||+|+......|+|++|.+.+++.++++++.+++..||++..+.+|||..|.+..++++|++|.=.|++++
T Consensus        93 Gs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~  172 (354)
T KOG0025|consen   93 GSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSG  172 (354)
T ss_pred             cCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhh
Q 023007          201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF  280 (288)
Q Consensus       201 vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~  280 (288)
                      +|++.+|+|+++|++.+-++++.+..++..+.++.+|+++++...+..-..+.......+++-+.|||+|+.......+.
T Consensus       173 VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~  252 (354)
T KOG0025|consen  173 VGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARY  252 (354)
T ss_pred             HHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHH
Confidence            99999999999999999999988777888888999999999975443212222222223358999999999999899999


Q ss_pred             ccCCCeeC
Q 023007          281 LRFREEQW  288 (288)
Q Consensus       281 l~~~G~~v  288 (288)
                      |.+||..|
T Consensus       253 L~~Ggtmv  260 (354)
T KOG0025|consen  253 LERGGTMV  260 (354)
T ss_pred             HhcCceEE
Confidence            99998754

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.7e-37  Score=279.60  Aligned_cols=230  Identities=24%  Similarity=0.312  Sum_probs=201.8

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++..++..   +++++.|.|++.++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus         2 ~~a~~~~~~~~~---l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~   77 (368)
T TIGR02818         2 SRAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVEAVGEGVTSV   77 (368)
T ss_pred             ceEEEEecCCCC---eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEEEECCCCccC
Confidence            788998887754   888999999999999999999999999999999887543 2568999999999999999999999


Q ss_pred             CCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEEcCCC
Q 023007          128 APGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSKD  160 (288)
Q Consensus       128 ~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~ip~~  160 (288)
                      ++||+|++.+.                                               ..|+|+||+++|...++++|++
T Consensus        78 ~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~  157 (368)
T TIGR02818        78 KVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPA  157 (368)
T ss_pred             CCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCC
Confidence            99999987531                                               0268999999999999999999


Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD  239 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~  239 (288)
                      +++++++.+++++.|||+++.+.+.+++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .++++++.++++|++
T Consensus       158 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~----~~~~~~~~a~~~Ga~  232 (368)
T TIGR02818       158 APLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAID----INPAKFELAKKLGAT  232 (368)
T ss_pred             CCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCC
Confidence            9999999999999999999987789999999999987 9999999999999999 687776    588999999999999


Q ss_pred             EEEeCCcc---cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007          240 EVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW  288 (288)
Q Consensus       240 ~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v  288 (288)
                      +++++++.   ..+.+.+++++ + +|++|||+|+.. ...++++++++ |+++
T Consensus       233 ~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~G~~~~~~~~~~~~~~~~G~~v  284 (368)
T TIGR02818       233 DCVNPNDYDKPIQEVIVEITDG-G-VDYSFECIGNVNVMRAALECCHKGWGESI  284 (368)
T ss_pred             eEEcccccchhHHHHHHHHhCC-C-CCEEEECCCCHHHHHHHHHHhhcCCCeEE
Confidence            99987642   23567777776 4 999999999755 48999999886 9874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-37  Score=262.22  Aligned_cols=236  Identities=24%  Similarity=0.260  Sum_probs=203.2

Q ss_pred             CCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      ..|.+.++|.++..+.... .++.+++.|++.++||+|+++|+|+|++|++.+.|..+. -++|.++|||.+|+|+++|+
T Consensus         5 ~~p~k~~g~~~~~~~G~l~-p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvGs   82 (360)
T KOG0023|consen    5 SIPEKQFGWAARDPSGVLS-PEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVGS   82 (360)
T ss_pred             cCchhhEEEEEECCCCCCC-cceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEECC
Confidence            3467789999999887533 678999999999999999999999999999999998877 58999999999999999999


Q ss_pred             CCCCCCCCCEEEecCC---C-------------------------------CcccceEEEeeCCcEEEcCCCCChhhhcc
Q 023007          123 AVTRLAPGDWVIPSPP---S-------------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAAT  168 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~---~-------------------------------~G~~a~~~~~~~~~l~~ip~~~~~~~aa~  168 (288)
                      +|++|++||+|-.=+-   +                               .|+|++|+++++.+.++||++++++.||.
T Consensus        83 ~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAP  162 (360)
T KOG0023|consen   83 NVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAP  162 (360)
T ss_pred             CcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccc
Confidence            9999999999854210   0                               56699999999999999999999999999


Q ss_pred             cccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-c
Q 023007          169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L  247 (288)
Q Consensus       169 l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~  247 (288)
                      +.+++.|.|..|.. .++.||+++.|.|+ |++|.+++|+|+++|.+|+++..   .+.++.+.++.||++.+++..+ .
T Consensus       163 lLCaGITvYspLk~-~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~---~~~kkeea~~~LGAd~fv~~~~d~  237 (360)
T KOG0023|consen  163 LLCAGITVYSPLKR-SGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVIST---SSKKKEEAIKSLGADVFVDSTEDP  237 (360)
T ss_pred             hhhcceEEeehhHH-cCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeC---CchhHHHHHHhcCcceeEEecCCH
Confidence            99999999999976 88889999999999 55999999999999999999984   2346777888999999988763 3


Q ss_pred             -cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          248 -EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       248 -~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                       ..+.+...+++  .+|.+.+. ....++.++.+|+++|++|
T Consensus       238 d~~~~~~~~~dg--~~~~v~~~-a~~~~~~~~~~lk~~Gt~V  276 (360)
T KOG0023|consen  238 DIMKAIMKTTDG--GIDTVSNL-AEHALEPLLGLLKVNGTLV  276 (360)
T ss_pred             HHHHHHHHhhcC--cceeeeec-cccchHHHHHHhhcCCEEE
Confidence             34666666666  47777766 4455699999999999986

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.5e-37  Score=261.56  Aligned_cols=232  Identities=25%  Similarity=0.302  Sum_probs=210.4

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      +.++|+.+.++++.|   +.++|+..++|+.+||+||+.++++|++|...++|..+. ..+|.++|||.+|+|+++|.+|
T Consensus         5 vI~CKAAV~w~a~~P---L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~-~~fP~IlGHEaaGIVESvGegV   80 (375)
T KOG0022|consen    5 VITCKAAVAWEAGKP---LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPE-GLFPVILGHEAAGIVESVGEGV   80 (375)
T ss_pred             ceEEeEeeeccCCCC---eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCcc-ccCceEecccceeEEEEecCCc
Confidence            457999999999998   889999999999999999999999999999999998644 4789999999999999999999


Q ss_pred             CCCCCCCEEEecCCC------------------------------------------------CcccceEEEeeCCcEEE
Q 023007          125 TRLAPGDWVIPSPPS------------------------------------------------SGTWQSYVVKDQSVWHK  156 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~~------------------------------------------------~G~~a~~~~~~~~~l~~  156 (288)
                      +++++||+|+.+...                                                ..+|+||.+++...+++
T Consensus        81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k  160 (375)
T KOG0022|consen   81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK  160 (375)
T ss_pred             cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence            999999999987521                                                34899999999999999


Q ss_pred             cCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC
Q 023007          157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL  236 (288)
Q Consensus       157 ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~  236 (288)
                      |++..+++.++.+.+...|+|.+..+.++++||+++.|+|. |++|+++++-|+..|+..|+-+|   -+++|++.+++|
T Consensus       161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvD---iN~~Kf~~ak~f  236 (375)
T KOG0022|consen  161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVD---INPDKFEKAKEF  236 (375)
T ss_pred             cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEe---cCHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999 99999999999999996666655   589999999999


Q ss_pred             CCCEEEeCCcc---cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCC-Ce
Q 023007          237 GADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFR-EE  286 (288)
Q Consensus       237 g~~~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~-G~  286 (288)
                      |+++++|+.+.   ..+.+.+.|++  ++|.-|||.|+..+ .+++.+...+ |.
T Consensus       237 GaTe~iNp~d~~~~i~evi~EmTdg--GvDysfEc~G~~~~m~~al~s~h~GwG~  289 (375)
T KOG0022|consen  237 GATEFINPKDLKKPIQEVIIEMTDG--GVDYSFECIGNVSTMRAALESCHKGWGK  289 (375)
T ss_pred             CcceecChhhccccHHHHHHHHhcC--CceEEEEecCCHHHHHHHHHHhhcCCCe
Confidence            99999999843   24778999997  69999999999887 8899888877 54

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=8.8e-37  Score=276.34  Aligned_cols=231  Identities=24%  Similarity=0.324  Sum_probs=202.5

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      +||++++...+..   +++++.|.|.+.++||+||+.++++|++|.+.+.|.++.. .+|.++|||++|+|+++|+++++
T Consensus         2 ~~~a~~~~~~~~~---~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~-~~p~v~G~E~~G~V~~vG~~v~~   77 (368)
T cd08300           2 TCKAAVAWEAGKP---LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG-LFPVILGHEGAGIVESVGEGVTS   77 (368)
T ss_pred             cceEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC-CCCceeccceeEEEEEeCCCCcc
Confidence            5789988877654   7889999999999999999999999999999988865432 56889999999999999999999


Q ss_pred             CCCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEEcCC
Q 023007          127 LAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSK  159 (288)
Q Consensus       127 ~~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~ip~  159 (288)
                      |++||+|++.+.                                               ..|+|+||+.++.+.++++|+
T Consensus        78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  157 (368)
T cd08300          78 VKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINP  157 (368)
T ss_pred             CCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCC
Confidence            999999987521                                               125899999999999999999


Q ss_pred             CCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCC
Q 023007          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGA  238 (288)
Q Consensus       160 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~  238 (288)
                      ++++.+++.++.++.|||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +++++.    .++++.+.++++|+
T Consensus       158 ~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~----~~~~~~~~~~~lGa  232 (368)
T cd08300         158 EAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGID----INPDKFELAKKFGA  232 (368)
T ss_pred             CCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCC
Confidence            99999999999999999999887789999999999986 9999999999999999 587777    57889999999999


Q ss_pred             CEEEeCCcc---cHHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCC-CeeC
Q 023007          239 DEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFR-EEQW  288 (288)
Q Consensus       239 ~~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~-G~~v  288 (288)
                      ++++++++.   ..+.+.+++++ + +|+||||+|+. ..+.++++++++ |+++
T Consensus       233 ~~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~g~~~~~~~a~~~l~~~~G~~v  285 (368)
T cd08300         233 TDCVNPKDHDKPIQQVLVEMTDG-G-VDYTFECIGNVKVMRAALEACHKGWGTSV  285 (368)
T ss_pred             CEEEcccccchHHHHHHHHHhCC-C-CcEEEECCCChHHHHHHHHhhccCCCeEE
Confidence            999988753   34667778876 4 99999999985 459999999886 9875

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=2.3e-36  Score=273.75  Aligned_cols=231  Identities=22%  Similarity=0.302  Sum_probs=202.5

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      +||++++.+++.+   +++++.+.|++.++||+||+.++++|++|.+.+.|..+. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~~ka~~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~   77 (369)
T cd08301           2 TCKAAVAWEAGKP---LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQT-PLFPRILGHEAAGIVESVGEGVTD   77 (369)
T ss_pred             ccEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCC-CCCCcccccccceEEEEeCCCCCc
Confidence            6899999987764   888999999999999999999999999999998886542 356899999999999999999999


Q ss_pred             CCCCCEEEecCC------------------------------------------------CCcccceEEEeeCCcEEEcC
Q 023007          127 LAPGDWVIPSPP------------------------------------------------SSGTWQSYVVKDQSVWHKVS  158 (288)
Q Consensus       127 ~~~Gd~V~~~~~------------------------------------------------~~G~~a~~~~~~~~~l~~ip  158 (288)
                      |++||+|++.+.                                                ..|+|+||++++..+++++|
T Consensus        78 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  157 (369)
T cd08301          78 LKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKIN  157 (369)
T ss_pred             cccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECC
Confidence            999999997521                                                12789999999999999999


Q ss_pred             CCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCC
Q 023007          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLG  237 (288)
Q Consensus       159 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g  237 (288)
                      +++++++++.+++.+.|+|+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +++++.    .++++.+.++++|
T Consensus       158 ~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~----~~~~~~~~~~~~G  232 (369)
T cd08301         158 PEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVD----LNPSKFEQAKKFG  232 (369)
T ss_pred             CCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcC
Confidence            999999999999899999999888889999999999987 9999999999999999 688887    5788999999999


Q ss_pred             CCEEEeCCcc---cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007          238 ADEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW  288 (288)
Q Consensus       238 ~~~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v  288 (288)
                      ++.++++.+.   ..+.+++++++ + +|++|||+|+.. ...++++++++ |+++
T Consensus       233 a~~~i~~~~~~~~~~~~v~~~~~~-~-~d~vid~~G~~~~~~~~~~~~~~~~g~~v  286 (369)
T cd08301         233 VTEFVNPKDHDKPVQEVIAEMTGG-G-VDYSFECTGNIDAMISAFECVHDGWGVTV  286 (369)
T ss_pred             CceEEcccccchhHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHHhhcCCCEEE
Confidence            9999987652   33567777766 4 999999999865 48899999996 8874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=5e-36  Score=266.27  Aligned_cols=234  Identities=30%  Similarity=0.471  Sum_probs=208.4

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++.+.+.+++++.|.|.+.++||+|||.++++|+.|...+.|.++.....|.++|||++|+|+++|+++++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            68899988776544588999999999999999999999999999998888765333567899999999999999999999


Q ss_pred             CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHH
Q 023007          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (288)
Q Consensus       128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~  207 (288)
                      ++||+|++... .|+|++|+.++...++++|+++++.+++.++..+.++|+++.. .++++|++|+|+|++|.+|+++++
T Consensus        81 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~  158 (324)
T cd08292          81 QVGQRVAVAPV-HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAM  158 (324)
T ss_pred             CCCCEEEeccC-CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHH
Confidence            99999998753 4899999999999999999999999999999999999998854 889999999999999999999999


Q ss_pred             HHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCe
Q 023007          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREE  286 (288)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~  286 (288)
                      +|+.+|++++.++    .++++.+.++++|.++++++++. ..+.+.+++++++ +|++|||+|+.....++++++++|+
T Consensus       159 ~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~d~~g~~~~~~~~~~l~~~g~  233 (324)
T cd08292         159 LAAARGINVINLV----RRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAP-ISVALDSVGGKLAGELLSLLGEGGT  233 (324)
T ss_pred             HHHHCCCeEEEEe----cCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCC-CcEEEECCCChhHHHHHHhhcCCcE
Confidence            9999999999998    57778888888999999988764 3467888888876 9999999999877999999999999


Q ss_pred             eC
Q 023007          287 QW  288 (288)
Q Consensus       287 ~v  288 (288)
                      |+
T Consensus       234 ~v  235 (324)
T cd08292         234 LV  235 (324)
T ss_pred             EE
Confidence            85

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=6e-36  Score=266.32  Aligned_cols=234  Identities=30%  Similarity=0.456  Sum_probs=201.6

Q ss_pred             ceEEEEccCCCCC--cceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~--~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      ||++++.+++.+.  +.+++++.|.|.+.++||+||+.++++|++|+..+.|.++....+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            6899999887541  23788889999999999999999999999999998887654445688999999999999999999


Q ss_pred             C-CCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEe-CCCChHHH
Q 023007          126 R-LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN-GATSIVGQ  203 (288)
Q Consensus       126 ~-~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~-g~~g~vG~  203 (288)
                      + |++||+|++.....|+|++|++++.+.++++|+++++.+++.+++.++|||..+ ..... ++++++|+ +++|++|+
T Consensus        81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~  158 (324)
T cd08291          81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGR  158 (324)
T ss_pred             ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHH
Confidence            6 999999998753248999999999999999999999999998888899998554 44555 55667666 78899999


Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR  282 (288)
Q Consensus       204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~  282 (288)
                      +++|+|+.+|+++++++    .++++.+.++++|++++++++.. ..+.+.+++.+.+ +|++|||+|+......+++++
T Consensus       159 ~a~q~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~-~d~vid~~g~~~~~~~~~~l~  233 (324)
T cd08291         159 MLVRLCKADGIKVINIV----RRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLN-ATIFFDAVGGGLTGQILLAMP  233 (324)
T ss_pred             HHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCC-CcEEEECCCcHHHHHHHHhhC
Confidence            99999999999999888    57889999999999999998764 4567888887766 999999999988888899999


Q ss_pred             CCCeeC
Q 023007          283 FREEQW  288 (288)
Q Consensus       283 ~~G~~v  288 (288)
                      ++|+++
T Consensus       234 ~~G~~v  239 (324)
T cd08291         234 YGSTLY  239 (324)
T ss_pred             CCCEEE
Confidence            999975

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=5.2e-36  Score=272.02  Aligned_cols=230  Identities=22%  Similarity=0.268  Sum_probs=199.3

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      ...||++++.++++.   +++++.|.|.+.++||+|||.++++|++|.+.+.+..    .+|.++|||++|+|+++|+++
T Consensus        10 ~~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v   82 (378)
T PLN02827         10 VITCRAAVAWGAGEA---LVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGV   82 (378)
T ss_pred             cceeEEEEEecCCCC---ceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCC
Confidence            346899999887643   7889999999999999999999999999999887642    347899999999999999999


Q ss_pred             CCCCCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEEc
Q 023007          125 TRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKV  157 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~i  157 (288)
                      ++|++||+|++.+.                                               ..|+|+||+.++...++++
T Consensus        83 ~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~i  162 (378)
T PLN02827         83 TEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  162 (378)
T ss_pred             cccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEEC
Confidence            99999999998642                                               0279999999999999999


Q ss_pred             CCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhC
Q 023007          158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGL  236 (288)
Q Consensus       158 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~  236 (288)
                      |+++++++++.+++++.++|+++.+.+++++|++|+|+|+ |++|++++|+|+.+|++ ++++.    .++++.+.++++
T Consensus       163 P~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~----~~~~~~~~a~~l  237 (378)
T PLN02827        163 DPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVD----INPEKAEKAKTF  237 (378)
T ss_pred             CCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC----CCHHHHHHHHHc
Confidence            9999999999998888899988877788999999999997 99999999999999996 55544    478899999999


Q ss_pred             CCCEEEeCCc---ccHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007          237 GADEVFTESQ---LEVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW  288 (288)
Q Consensus       237 g~~~v~~~~~---~~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v  288 (288)
                      |+++++++++   ...+.+.+++++ + +|++|||+|... +..++++++++ |++|
T Consensus       238 Ga~~~i~~~~~~~~~~~~v~~~~~~-g-~d~vid~~G~~~~~~~~l~~l~~g~G~iv  292 (378)
T PLN02827        238 GVTDFINPNDLSEPIQQVIKRMTGG-G-ADYSFECVGDTGIATTALQSCSDGWGLTV  292 (378)
T ss_pred             CCcEEEcccccchHHHHHHHHHhCC-C-CCEEEECCCChHHHHHHHHhhccCCCEEE
Confidence            9999998875   233567777776 4 999999999864 59999999998 9985

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-36  Score=267.46  Aligned_cols=226  Identities=17%  Similarity=0.175  Sum_probs=187.4

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHh-CCCCC-CCCCCcccccceEEEEEEecCC
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE-GVYPV-RPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      ..++++++++++.    +++++.+.| +.++||+|||.++++|++|++.+. |..+. ...+|.++|||++|+|+++  +
T Consensus         3 ~~~~~~~~~~~~~----~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~   75 (343)
T PRK09880          3 VKTQSCVVAGKKD----VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--D   75 (343)
T ss_pred             ccceEEEEecCCc----eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--c
Confidence            3578999998776    889999887 689999999999999999999875 33221 1256899999999999999  7


Q ss_pred             CCCCCCCCEEEecC-------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccc
Q 023007          124 VTRLAPGDWVIPSP-------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVN  172 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~-------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~  172 (288)
                      +++|++||+|+..+                               ...|+|+||++++++.++++|+++++++++ +..+
T Consensus        76 v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~  154 (343)
T PRK09880         76 SSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEP  154 (343)
T ss_pred             CccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcH
Confidence            88999999998642                               125899999999999999999999987655 4457


Q ss_pred             hHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHH
Q 023007          173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN  251 (288)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  251 (288)
                      +.+||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|++ ++++.    .++++++.++++|+++++++++.....
T Consensus       155 ~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~~~~~  228 (343)
T PRK09880        155 LAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCAD----VSPRSLSLAREMGADKLVNPQNDDLDH  228 (343)
T ss_pred             HHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEe----CCHHHHHHHHHcCCcEEecCCcccHHH
Confidence            8899999976 55668999999997 99999999999999994 66666    578999999999999999987655443


Q ss_pred             HHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          252 VKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +...   .+++|++|||+|++. .+.++++++++|+++
T Consensus       229 ~~~~---~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv  263 (343)
T PRK09880        229 YKAE---KGYFDVSFEVSGHPSSINTCLEVTRAKGVMV  263 (343)
T ss_pred             Hhcc---CCCCCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence            3322   224999999999865 489999999999985

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1e-35  Score=268.48  Aligned_cols=231  Identities=19%  Similarity=0.284  Sum_probs=192.6

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      |.+++++......+.   +++.+++.|.+.++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus        10 ~~~~~~~~~~~~~~~---l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v   85 (360)
T PLN02586         10 PQKAFGWAARDPSGV---LSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKNV   85 (360)
T ss_pred             hhheeEEEecCCCCC---ceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCCC
Confidence            445566666655442   778888889999999999999999999999998876543 2568999999999999999999


Q ss_pred             CCCCCCCEEEecCC----------------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccc
Q 023007          125 TRLAPGDWVIPSPP----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATII  170 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~----------------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~  170 (288)
                      ++|++||+|+..+.                                  ..|+|+||+++|.+.++++|+++++++++.++
T Consensus        86 ~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~  165 (360)
T PLN02586         86 KKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLL  165 (360)
T ss_pred             CccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhh
Confidence            99999999974210                                  14899999999999999999999999999999


Q ss_pred             cchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHH
Q 023007          171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK  250 (288)
Q Consensus       171 ~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  250 (288)
                      +.+.|+|+++.....+++|++|+|.|+ |++|++++|+|+.+|+++++++..   .+++.+.++++|+++++++++.  +
T Consensus       166 ~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~---~~~~~~~~~~~Ga~~vi~~~~~--~  239 (360)
T PLN02586        166 CAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSS---SNKEDEAINRLGADSFLVSTDP--E  239 (360)
T ss_pred             cchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC---cchhhhHHHhCCCcEEEcCCCH--H
Confidence            999999999987677889999999887 999999999999999998887632   3344556688999999987653  3


Q ss_pred             HHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          251 NVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       251 ~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      .+.+.++   ++|++|||+|+.. ++.++++++++|+++
T Consensus       240 ~~~~~~~---~~D~vid~~g~~~~~~~~~~~l~~~G~iv  275 (360)
T PLN02586        240 KMKAAIG---TMDYIIDTVSAVHALGPLLGLLKVNGKLI  275 (360)
T ss_pred             HHHhhcC---CCCEEEECCCCHHHHHHHHHHhcCCcEEE
Confidence            4555553   3999999999864 588999999999985

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=1.7e-35  Score=267.70  Aligned_cols=230  Identities=27%  Similarity=0.355  Sum_probs=200.7

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      .||++++.+.+..   ++++++|.|.+.++||+||+.++++|++|.+.+.|..+  ..+|.++|||++|+|+++|+++++
T Consensus         2 ~~ka~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~   76 (365)
T cd08277           2 KCKAAVAWEAGKP---LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTN   76 (365)
T ss_pred             ccEEEEEccCCCC---cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCcc
Confidence            5789999887653   78999999999999999999999999999999888654  356889999999999999999999


Q ss_pred             CCCCCEEEecCC----------------------------------------------CCcccceEEEeeCCcEEEcCCC
Q 023007          127 LAPGDWVIPSPP----------------------------------------------SSGTWQSYVVKDQSVWHKVSKD  160 (288)
Q Consensus       127 ~~~Gd~V~~~~~----------------------------------------------~~G~~a~~~~~~~~~l~~ip~~  160 (288)
                      +++||+|++.+.                                              ..|+|+||+.++.+.++++|++
T Consensus        77 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~  156 (365)
T cd08277          77 LKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPA  156 (365)
T ss_pred             CCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCC
Confidence            999999987521                                              1378999999999999999999


Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD  239 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~  239 (288)
                      +++++++.+++++.|||+++...+++++|++|+|+|+ |++|++++++|+.+|+ +|+++.    .++++++.++++|++
T Consensus       157 l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~----~~~~~~~~~~~~ga~  231 (365)
T cd08277         157 APLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVD----INEDKFEKAKEFGAT  231 (365)
T ss_pred             CCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCCC
Confidence            9999999999999999999877789999999999986 9999999999999999 577776    578899999999999


Q ss_pred             EEEeCCcc---cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCC-CeeC
Q 023007          240 EVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFR-EEQW  288 (288)
Q Consensus       240 ~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~-G~~v  288 (288)
                      +++++++.   ..+.+.+++++  ++|++|||+|+... ..++++++++ |++|
T Consensus       232 ~~i~~~~~~~~~~~~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~~G~~v  283 (365)
T cd08277         232 DFINPKDSDKPVSEVIREMTGG--GVDYSFECTGNADLMNEALESTKLGWGVSV  283 (365)
T ss_pred             cEeccccccchHHHHHHHHhCC--CCCEEEECCCChHHHHHHHHhcccCCCEEE
Confidence            99987653   24567777763  49999999997554 8899999885 9875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=2.3e-35  Score=268.63  Aligned_cols=230  Identities=18%  Similarity=0.175  Sum_probs=190.7

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCC-------CCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEE
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVK-------ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYS  119 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~-------~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~  119 (288)
                      -||++++.+++.    +++++.|.|+++       ++||+|||.+++||++|++.+.|.++.  ..|.++|||++|+|++
T Consensus         2 ~mka~v~~~~~~----~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~   75 (393)
T TIGR02819         2 GNRGVVYLGPGK----VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIE   75 (393)
T ss_pred             CceEEEEecCCc----eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEE
Confidence            479999988775    888999988864       689999999999999999999876432  4589999999999999


Q ss_pred             ecCCCCCCCCCCEEEecCC------------------------------------CCcccceEEEeeCC--cEEEcCCCC
Q 023007          120 VGSAVTRLAPGDWVIPSPP------------------------------------SSGTWQSYVVKDQS--VWHKVSKDS  161 (288)
Q Consensus       120 ~G~~~~~~~~Gd~V~~~~~------------------------------------~~G~~a~~~~~~~~--~l~~ip~~~  161 (288)
                      +|+++++|++||||+..+.                                    ..|+|+||+.+|..  .++++|+++
T Consensus        76 vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~  155 (393)
T TIGR02819        76 KGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRD  155 (393)
T ss_pred             EcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcc
Confidence            9999999999999976320                                    14899999999964  699999987


Q ss_pred             Ch----hhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC
Q 023007          162 PM----EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG  237 (288)
Q Consensus       162 ~~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g  237 (288)
                      +.    ..++.+..++.++|+++.. .++++|++|+|.|+ |++|++++|+|+.+|++++++++   .++++++.++++|
T Consensus       156 ~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d---~~~~r~~~a~~~G  230 (393)
T TIGR02819       156 QALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGD---LNPARLAQARSFG  230 (393)
T ss_pred             cccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeC---CCHHHHHHHHHcC
Confidence            53    3466777788999999865 78999999999776 99999999999999998776653   4678999999999


Q ss_pred             CCEEEeCCc-ccHHHHHHHhcCCCCccEEEECCCcc---------------cHHHHHhhccCCCeeC
Q 023007          238 ADEVFTESQ-LEVKNVKGLLANLPEPALGFNCVGGN---------------SASKVLKFLRFREEQW  288 (288)
Q Consensus       238 ~~~v~~~~~-~~~~~i~~~~~~~g~~D~v~d~~g~~---------------~~~~a~~~l~~~G~~v  288 (288)
                      ++.+.+.+. ...+.+.+++++.+ +|++|||+|.+               .++.++++++++|+++
T Consensus       231 a~~v~~~~~~~~~~~v~~~~~~~g-~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~  296 (393)
T TIGR02819       231 CETVDLSKDATLPEQIEQILGEPE-VDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIG  296 (393)
T ss_pred             CeEEecCCcccHHHHHHHHcCCCC-CcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEE
Confidence            975443333 33456777777765 99999999986               4599999999999985

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=4.1e-35  Score=262.50  Aligned_cols=239  Identities=49%  Similarity=0.783  Sum_probs=208.2

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCC-CeEEEEEeEEecChHHHHHHhCCCCCCCC----CCcccccceEEEEEEecC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKE-NDVCVKMLAAPINPSDINRIEGVYPVRPK----VPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~-~evlI~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~~G~V~~~G~  122 (288)
                      ||++++.+.+.+.+.+.+++.|.|++.+ ++|+||+.++++|+.|...+.|..+....    .|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            7899999988765568999999998887 99999999999999999988876543222    567899999999999999


Q ss_pred             CCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHH
Q 023007          123 AVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG  202 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG  202 (288)
                      ++.+|++||+|++.....|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.....+++|++|+|+|++|.+|
T Consensus        81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg  160 (341)
T cd08290          81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVG  160 (341)
T ss_pred             CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHH
Confidence            99999999999988644589999999999999999999999999999999999999998888899999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc----cHHHHHHHhcCCCCccEEEECCCcccHHHHH
Q 023007          203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKGLLANLPEPALGFNCVGGNSASKVL  278 (288)
Q Consensus       203 ~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~----~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~  278 (288)
                      ++++++|+.+|++++++++.....+++.+.++++|++++++++..    ..+.+..++++ + +|++|||+|+.....++
T Consensus       161 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~-~d~vld~~g~~~~~~~~  238 (341)
T cd08290         161 QAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-R-PKLALNCVGGKSATELA  238 (341)
T ss_pred             HHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-C-ceEEEECcCcHhHHHHH
Confidence            999999999999999998532111267788889999999988763    34566667766 4 99999999998888899


Q ss_pred             hhccCCCeeC
Q 023007          279 KFLRFREEQW  288 (288)
Q Consensus       279 ~~l~~~G~~v  288 (288)
                      ++++++|+|+
T Consensus       239 ~~l~~~G~~v  248 (341)
T cd08290         239 RLLSPGGTMV  248 (341)
T ss_pred             HHhCCCCEEE
Confidence            9999999985

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.6e-34  Score=261.72  Aligned_cols=229  Identities=22%  Similarity=0.328  Sum_probs=189.1

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~  128 (288)
                      |+..+...+.+. .+...+++.|.+.++||+|||.++++|++|++.+.|.+.. ..+|.++|||++|+|+++|+++++|+
T Consensus         6 ~a~~~~~~~~~~-~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~   83 (375)
T PLN02178          6 KAFGWAANDESG-VLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFK   83 (375)
T ss_pred             eeEEEEEccCCC-CceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccC
Confidence            444444333322 2777888888999999999999999999999998876532 24688999999999999999999999


Q ss_pred             CCCEEEecCC----------------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchH
Q 023007          129 PGDWVIPSPP----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL  174 (288)
Q Consensus       129 ~Gd~V~~~~~----------------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~  174 (288)
                      +||+|+..+.                                  ..|+|+||+.++++.++++|+++++++++.+++.+.
T Consensus        84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~  163 (375)
T PLN02178         84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI  163 (375)
T ss_pred             CCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence            9999974210                                  148999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcC-CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHH
Q 023007          175 TALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK  253 (288)
Q Consensus       175 ta~~~l~~~~~-~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~  253 (288)
                      |+|+++..... .++|++|+|.|+ |++|++++|+|+.+|++++++...   .+++.+.++++|+++++++++.  +.+.
T Consensus       164 ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~---~~~~~~~a~~lGa~~~i~~~~~--~~v~  237 (375)
T PLN02178        164 TVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRS---SEKEREAIDRLGADSFLVTTDS--QKMK  237 (375)
T ss_pred             HHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCC---hHHhHHHHHhCCCcEEEcCcCH--HHHH
Confidence            99999876443 368999999987 999999999999999998888731   3445778889999999987653  4555


Q ss_pred             HHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +.++  + +|++|||+|... .+.++++++++|+++
T Consensus       238 ~~~~--~-~D~vid~~G~~~~~~~~~~~l~~~G~iv  270 (375)
T PLN02178        238 EAVG--T-MDFIIDTVSAEHALLPLFSLLKVSGKLV  270 (375)
T ss_pred             HhhC--C-CcEEEECCCcHHHHHHHHHhhcCCCEEE
Confidence            6553  3 999999999875 599999999999985

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1.6e-34  Score=259.14  Aligned_cols=219  Identities=23%  Similarity=0.236  Sum_probs=184.1

Q ss_pred             cceEEEEcCCCCCC-CCeEEEEEeEEecChHHHHHHhCCC--CCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecC
Q 023007           61 SVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP  137 (288)
Q Consensus        61 ~~~~~~~~~~p~~~-~~evlI~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~  137 (288)
                      +.+++++.+.|++. ++||+|||.++++|+.|+.......  .....+|.++|||++|+|+++|+++++|++||+|+++.
T Consensus        21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  100 (345)
T cd08293          21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN  100 (345)
T ss_pred             cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence            55889999999874 9999999999999999964332111  11124578899999999999999999999999998753


Q ss_pred             CCCcccceEEEeeCCcEEEcCCCCChhh----hcccccchHHHHHHHHhhcCCCCC--CeEEEeCCCChHHHHHHHHHHH
Q 023007          138 PSSGTWQSYVVKDQSVWHKVSKDSPMEY----AATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARH  211 (288)
Q Consensus       138 ~~~G~~a~~~~~~~~~l~~ip~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~g--~~vlI~g~~g~vG~~a~~la~~  211 (288)
                         +.|++|++++++.++++|+++++.+    +++++.+++|||+++.+.+++++|  ++|||+|++|++|++++|+|++
T Consensus       101 ---~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~  177 (345)
T cd08293         101 ---WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRL  177 (345)
T ss_pred             ---CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence               5899999999999999999854322    456777899999999888888877  9999999999999999999999


Q ss_pred             cCC-eEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          212 RGI-HSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       212 ~g~-~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +|+ +|++++    .++++.+++++ +|+++++++++.. .+.++++++ .| +|++|||+|+.....++++|+++|+++
T Consensus       178 ~G~~~Vi~~~----~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~g-vd~vid~~g~~~~~~~~~~l~~~G~iv  251 (345)
T cd08293         178 LGCSRVVGIC----GSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EG-VDVYFDNVGGEISDTVISQMNENSHII  251 (345)
T ss_pred             cCCCEEEEEc----CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CC-ceEEEECCCcHHHHHHHHHhccCCEEE
Confidence            999 799888    57888888876 9999999987643 466777765 34 999999999987899999999999985

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.4e-34  Score=257.98  Aligned_cols=221  Identities=19%  Similarity=0.167  Sum_probs=189.6

Q ss_pred             EEEccCCCCC-cceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCC
Q 023007           51 VVYEREGPPD-SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAP  129 (288)
Q Consensus        51 ~~~~~~g~~~-~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~  129 (288)
                      +.+.++|.+. ..+++++.|.|++.++||+||+.++++|++|.+.+.|.++.. ..|.++|||++|+|+++|+++++|++
T Consensus         2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~   80 (329)
T TIGR02822         2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFAV   80 (329)
T ss_pred             eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccCC
Confidence            4555565542 458999999999999999999999999999999998865432 34689999999999999999999999


Q ss_pred             CCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHh
Q 023007          130 GDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED  182 (288)
Q Consensus       130 Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~  182 (288)
                      ||+|+..+.                           ..|+|+||+.++...++++|+++++.+++.+++++.|||+++..
T Consensus        81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~  160 (329)
T TIGR02822        81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR  160 (329)
T ss_pred             CCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh
Confidence            999975210                           14899999999999999999999999999999999999999964


Q ss_pred             hcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCc
Q 023007          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                       +++++|++|+|+|+ |++|++++|+|+.+|+++++++    .+++++++++++|+++++++.+..         .. ++
T Consensus       161 -~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~----~~~~~~~~a~~~Ga~~vi~~~~~~---------~~-~~  224 (329)
T TIGR02822       161 -ASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMT----RGAAARRLALALGAASAGGAYDTP---------PE-PL  224 (329)
T ss_pred             -cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEe----CChHHHHHHHHhCCceeccccccC---------cc-cc
Confidence             88999999999998 9999999999999999998887    578899999999999998854321         12 38


Q ss_pred             cEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          263 ALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       263 D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      |+++++.+.... +.++++++++|+++
T Consensus       225 d~~i~~~~~~~~~~~~~~~l~~~G~~v  251 (329)
T TIGR02822       225 DAAILFAPAGGLVPPALEALDRGGVLA  251 (329)
T ss_pred             eEEEECCCcHHHHHHHHHhhCCCcEEE
Confidence            999998876554 99999999999985

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3e-34  Score=257.76  Aligned_cols=227  Identities=26%  Similarity=0.301  Sum_probs=191.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||++++++++.    +++++.|.|++ .++||+|||.++++|++|...+.....  ...|.++|||++|+|+++|+++++
T Consensus         1 Mka~~~~~~~~----~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~   74 (347)
T PRK10309          1 MKSVVNDTDGI----VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDD   74 (347)
T ss_pred             CceEEEeCCCc----eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCC
Confidence            68999988764    88999999987 589999999999999999875432211  134789999999999999999999


Q ss_pred             CCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          127 LAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       127 ~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      |++||+|++.+.                          ..|+|++|+.++.+.++++|+++++++++.+. ++.++|+++
T Consensus        75 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~  153 (347)
T PRK10309         75 LHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF  153 (347)
T ss_pred             CCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH
Confidence            999999998641                          15899999999999999999999999998874 456678876


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCC
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL  259 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~  259 (288)
                       +...+++|++|+|+|+ |++|++++|+|+.+|++ ++++.    .++++.+.++++|++++++++....+.+.+++.+.
T Consensus       154 -~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~  227 (347)
T PRK10309        154 -HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAID----INSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL  227 (347)
T ss_pred             -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC----CCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCC
Confidence             4578899999999986 99999999999999998 45555    57889999999999999988765556677777765


Q ss_pred             CCcc-EEEECCCcccH-HHHHhhccCCCeeC
Q 023007          260 PEPA-LGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D-~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      + +| ++|||+|+... ..++++++++|+++
T Consensus       228 ~-~d~~v~d~~G~~~~~~~~~~~l~~~G~iv  257 (347)
T PRK10309        228 R-FDQLILETAGVPQTVELAIEIAGPRAQLA  257 (347)
T ss_pred             C-CCeEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence            5 88 99999998654 99999999999985

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2.4e-34  Score=256.95  Aligned_cols=232  Identities=24%  Similarity=0.318  Sum_probs=200.1

Q ss_pred             eEEEEccC---CCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           49 KAVVYERE---GPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        49 ~a~~~~~~---g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      |++++.++   +.+ +.++..+.|.|++.++||+||+.++++|+.|...+.+..+. ...|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~   78 (336)
T TIGR02817         1 KAVGYKKPLPITDP-DALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGVVVAVGDEVT   78 (336)
T ss_pred             CceeeccccCCCCc-ccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEEEEEeCCCCC
Confidence            56777776   444 44888899999999999999999999999999888775433 24578899999999999999999


Q ss_pred             CCCCCCEEEecC--CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCC-----CCeEEEeCCC
Q 023007          126 RLAPGDWVIPSP--PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-----GDSIVQNGAT  198 (288)
Q Consensus       126 ~~~~Gd~V~~~~--~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~vlI~g~~  198 (288)
                      +|++||+|+++.  ...|+|++|+.++.+.++++|+++++.+++.++++++|||+++....++++     |++|+|+|++
T Consensus        79 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~  158 (336)
T TIGR02817        79 LFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGA  158 (336)
T ss_pred             CCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCC
Confidence            999999999874  225899999999999999999999999999999999999999988888887     9999999999


Q ss_pred             ChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc-ccHHH
Q 023007          199 SIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASK  276 (288)
Q Consensus       199 g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~-~~~~~  276 (288)
                      |++|++++|+|+.+ |+++++++    .++++.+.++++|+++++++.....+.+.++ .+.+ +|+++||+++ .....
T Consensus       159 g~vg~~~~~~ak~~~G~~vi~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~-~~~~-vd~vl~~~~~~~~~~~  232 (336)
T TIGR02817       159 GGVGSILIQLARQLTGLTVIATA----SRPESQEWVLELGAHHVIDHSKPLKAQLEKL-GLEA-VSYVFSLTHTDQHFKE  232 (336)
T ss_pred             cHHHHHHHHHHHHhCCCEEEEEc----CcHHHHHHHHHcCCCEEEECCCCHHHHHHHh-cCCC-CCEEEEcCCcHHHHHH
Confidence            99999999999998 99999998    5788889999999999998655444566664 3334 9999999865 45599


Q ss_pred             HHhhccCCCeeC
Q 023007          277 VLKFLRFREEQW  288 (288)
Q Consensus       277 a~~~l~~~G~~v  288 (288)
                      ++++++++|+|+
T Consensus       233 ~~~~l~~~G~~v  244 (336)
T TIGR02817       233 IVELLAPQGRFA  244 (336)
T ss_pred             HHHHhccCCEEE
Confidence            999999999985

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=4.1e-34  Score=258.18  Aligned_cols=230  Identities=26%  Similarity=0.328  Sum_probs=200.7

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC--
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR--  126 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~--  126 (288)
                      |++++.++++   .+++++.+.|.+.++||+||+.++++|+.|...+.|.++. ...|.++|||++|+|+++|+++++  
T Consensus         2 ka~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   77 (361)
T cd08231           2 RAAVLTGPGK---PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDV   77 (361)
T ss_pred             eEEEEcCCCC---CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCccccc
Confidence            7889998874   2899999999999999999999999999999998887653 356889999999999999999986  


Q ss_pred             ----CCCCCEEEecCC---------------------------------CCcccceEEEeeCC-cEEEcCCCCChhhhcc
Q 023007          127 ----LAPGDWVIPSPP---------------------------------SSGTWQSYVVKDQS-VWHKVSKDSPMEYAAT  168 (288)
Q Consensus       127 ----~~~Gd~V~~~~~---------------------------------~~G~~a~~~~~~~~-~l~~ip~~~~~~~aa~  168 (288)
                          |++||+|++.+.                                 ..|+|++|+.++++ .++++|+++++.+++.
T Consensus        78 ~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~  157 (361)
T cd08231          78 AGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAP  157 (361)
T ss_pred             cCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHH
Confidence                999999998731                                 24899999999986 7999999999999999


Q ss_pred             cccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc
Q 023007          169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (288)
Q Consensus       169 l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~  247 (288)
                      ++++++|||+++......++|++|||+|+ |++|++++++|+.+|+ +++++.    .++++.++++++|++.+++++..
T Consensus       158 ~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~  232 (361)
T cd08231         158 ANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVID----GSPERLELAREFGADATIDIDEL  232 (361)
T ss_pred             hcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCCCeEEcCccc
Confidence            98999999999988777779999999985 9999999999999999 888887    57888899999999999887654


Q ss_pred             cH----HHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          248 EV----KNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       248 ~~----~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      ..    ..+.+++++.+ +|++|||+|+.. ...++++++++|+|+
T Consensus       233 ~~~~~~~~i~~~~~~~~-~d~vid~~g~~~~~~~~~~~l~~~G~~v  277 (361)
T cd08231         233 PDPQRRAIVRDITGGRG-ADVVIEASGHPAAVPEGLELLRRGGTYV  277 (361)
T ss_pred             ccHHHHHHHHHHhCCCC-CcEEEECCCChHHHHHHHHHhccCCEEE
Confidence            21    36777787766 999999998754 589999999999985

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=2.2e-34  Score=258.89  Aligned_cols=227  Identities=22%  Similarity=0.241  Sum_probs=194.2

Q ss_pred             EEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCC
Q 023007           51 VVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPG  130 (288)
Q Consensus        51 ~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~G  130 (288)
                      +++++++.+   +++++.|.|.+.++||+|||.++++|++|++.+.+.......+|.++|||++|+|+++|++++++ +|
T Consensus         2 ~~~~~~g~~---~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~G   77 (349)
T TIGR03201         2 WMMTEPGKP---MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IG   77 (349)
T ss_pred             ceEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CC
Confidence            455666653   78889999999999999999999999999988754433223568899999999999999999887 99


Q ss_pred             CEEEecCC--------------------------CCcccceEEEeeCCcEEEcCC------CCChhhhcccccchHHHHH
Q 023007          131 DWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSK------DSPMEYAATIIVNPLTALR  178 (288)
Q Consensus       131 d~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~------~~~~~~aa~l~~~~~ta~~  178 (288)
                      |+|+..+.                          ..|+|+||+.++.+.++++|+      ++++++++.++.++.++|+
T Consensus        78 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~  157 (349)
T TIGR03201        78 KAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQ  157 (349)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHH
Confidence            99987320                          258999999999999999999      8999999999999999999


Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc----cHHHHHH
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKG  254 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~----~~~~i~~  254 (288)
                      ++.. .++++|++|+|+|+ |++|++++|+|+.+|++++++.    .+++++++++++|+++++++++.    ..+.+.+
T Consensus       158 a~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~----~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~  231 (349)
T TIGR03201       158 AAVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAID----IDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKA  231 (349)
T ss_pred             HHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHhCCceEecCccccHHHHHHHHHh
Confidence            9875 78999999999999 9999999999999999988877    57889999999999999987653    2356777


Q ss_pred             HhcCCCCcc----EEEECCCcccH-HHHHhhccCCCeeC
Q 023007          255 LLANLPEPA----LGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D----~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      ++++.| +|    ++|||+|+... +.++++++++|+++
T Consensus       232 ~t~~~g-~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv  269 (349)
T TIGR03201       232 FAKARG-LRSTGWKIFECSGSKPGQESALSLLSHGGTLV  269 (349)
T ss_pred             hcccCC-CCCCcCEEEECCCChHHHHHHHHHHhcCCeEE
Confidence            888766 76    89999998765 78999999999975

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.4e-34  Score=259.19  Aligned_cols=228  Identities=23%  Similarity=0.267  Sum_probs=181.2

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCC--CCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP--KVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      ||++++...+. +  ++++++|.|++.++||+|||.++++|++|++.+.|.++..+  ..|.++|||++|+|+++|++ +
T Consensus         1 mka~~~~~~~~-~--l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~   76 (355)
T cd08230           1 MKAIAVKPGKP-G--VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S   76 (355)
T ss_pred             CceeEecCCCC-C--CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence            68888885432 2  88999999999999999999999999999999988654322  35789999999999999999 9


Q ss_pred             CCCCCCEEEecCC-----------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHH
Q 023007          126 RLAPGDWVIPSPP-----------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA  176 (288)
Q Consensus       126 ~~~~Gd~V~~~~~-----------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta  176 (288)
                      +|++||+|+..+.                             ..|+|+||+.++.+.++++|++++  +++.+..++.++
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~  154 (355)
T cd08230          77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVV  154 (355)
T ss_pred             CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHHH
Confidence            9999999987531                             148899999999999999999999  344444466665


Q ss_pred             HHHHHhh------cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHH
Q 023007          177 LRMLEDF------TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK  250 (288)
Q Consensus       177 ~~~l~~~------~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  250 (288)
                      +.++...      ..+++|++|+|+|+ |++|++++|+|+.+|++++++.+.+ .++++++.++++|++. +++.+....
T Consensus       155 ~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~-~~~~~~~~~~~~Ga~~-v~~~~~~~~  231 (355)
T cd08230         155 EKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRD-PPDPKADIVEELGATY-VNSSKTPVA  231 (355)
T ss_pred             HHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEE-ecCCccchh
Confidence            5544322      23678999999997 9999999999999999988887321 1578899999999987 455544332


Q ss_pred             HHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          251 NVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       251 ~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      . ...  .. ++|+||||+|++. ++.++++++++|+++
T Consensus       232 ~-~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v  266 (355)
T cd08230         232 E-VKL--VG-EFDLIIEATGVPPLAFEALPALAPNGVVI  266 (355)
T ss_pred             h-hhh--cC-CCCEEEECcCCHHHHHHHHHHccCCcEEE
Confidence            2 111  22 4999999999865 599999999999975

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=6.7e-34  Score=255.88  Aligned_cols=229  Identities=27%  Similarity=0.331  Sum_probs=195.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC-C---------CCCCCcccccceEEEE
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP-V---------RPKVPAVGGYEGVGEV  117 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~-~---------~~~~p~~~G~e~~G~V  117 (288)
                      ||++++.+++.    +++++.+.|++.++||+||+.++++|+.|...+.+... .         ....|.++|||++|+|
T Consensus         1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   76 (351)
T cd08233           1 MKAARYHGRKD----IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV   76 (351)
T ss_pred             CceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence            68999987654    88999999999999999999999999999887654311 0         1135789999999999


Q ss_pred             EEecCCCCCCCCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccc
Q 023007          118 YSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATII  170 (288)
Q Consensus       118 ~~~G~~~~~~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~  170 (288)
                      +++|+++++|++||+|++.+.                           ..|+|++|+.++.+.++++|+++++.+++.+ 
T Consensus        77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-  155 (351)
T cd08233          77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-  155 (351)
T ss_pred             EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence            999999999999999997321                           1489999999999999999999999998776 


Q ss_pred             cchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-
Q 023007          171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-  248 (288)
Q Consensus       171 ~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-  248 (288)
                      .++.+||+++ ...++++|++|+|+|+ |.+|++++|+|+.+|+ +++++.    .++++.++++++|++.++++++.. 
T Consensus       156 ~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~----~~~~~~~~~~~~ga~~~i~~~~~~~  229 (351)
T cd08233         156 EPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSE----PSEARRELAEELGATIVLDPTEVDV  229 (351)
T ss_pred             cHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEECCCccCH
Confidence            5788999998 5688999999999986 9999999999999999 677776    578888899999999999987653 


Q ss_pred             HHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          249 VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       249 ~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      .+.+.+++++.+ +|++|||+|+. .++.++++++++|+++
T Consensus       230 ~~~l~~~~~~~~-~d~vid~~g~~~~~~~~~~~l~~~G~~v  269 (351)
T cd08233         230 VAEVRKLTGGGG-VDVSFDCAGVQATLDTAIDALRPRGTAV  269 (351)
T ss_pred             HHHHHHHhCCCC-CCEEEECCCCHHHHHHHHHhccCCCEEE
Confidence            467777887755 99999999965 4589999999999985

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.1e-34  Score=256.75  Aligned_cols=228  Identities=25%  Similarity=0.273  Sum_probs=193.8

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      .+++++++++++.   +++++++.|.+.++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus         9 ~~~~~~~~~~~~~---~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv~vG~~v~~   84 (357)
T PLN02514          9 KTTGWAARDPSGH---LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSK   84 (357)
T ss_pred             eEEEEEEecCCCC---ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEEEECCCccc
Confidence            4799999999875   788899999999999999999999999999988876533 245889999999999999999999


Q ss_pred             CCCCCEEEecC----------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccc
Q 023007          127 LAPGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVN  172 (288)
Q Consensus       127 ~~~Gd~V~~~~----------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~  172 (288)
                      |++||+|+..+                                  ...|+|+||++++...++++|+++++.+++.++++
T Consensus        85 ~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  164 (357)
T PLN02514         85 FTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCA  164 (357)
T ss_pred             ccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhh
Confidence            99999997421                                  01489999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHH
Q 023007          173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKN  251 (288)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~  251 (288)
                      +.|||+++......++|++|+|+|+ |++|++++|+|+.+|+++++++    .++++++ .++++|+++++++.+.  +.
T Consensus       165 ~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~----~~~~~~~~~~~~~Ga~~~i~~~~~--~~  237 (357)
T PLN02514        165 GVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVIS----SSDKKREEALEHLGADDYLVSSDA--AE  237 (357)
T ss_pred             HHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHHhcCCcEEecCCCh--HH
Confidence            9999999987677789999999976 9999999999999999998887    3555554 4467999988776442  34


Q ss_pred             HHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          252 VKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +.+.+.  + +|++|||+|... .+.++++++++|+++
T Consensus       238 ~~~~~~--~-~D~vid~~g~~~~~~~~~~~l~~~G~iv  272 (357)
T PLN02514        238 MQEAAD--S-LDYIIDTVPVFHPLEPYLSLLKLDGKLI  272 (357)
T ss_pred             HHHhcC--C-CcEEEECCCchHHHHHHHHHhccCCEEE
Confidence            555543  3 999999999754 589999999999985

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=5.4e-34  Score=255.25  Aligned_cols=229  Identities=24%  Similarity=0.243  Sum_probs=190.4

Q ss_pred             ceEEEEccCCCCCcceEEEEcCC----CCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccce--EEEEEEec
Q 023007           48 SKAVVYEREGPPDSVIKMIELPP----VEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEG--VGEVYSVG  121 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~----p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~~G  121 (288)
                      +|+|....++  .+.+++++.+.    |++.++||||||.++++|+.|++.+.|........|.++|++.  .|++..+|
T Consensus         8 ~~~~~~~~~~--~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~   85 (338)
T cd08295           8 LKAYVTGFPK--ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVD   85 (338)
T ss_pred             EecCCCCCCC--ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEe
Confidence            3555533333  44589999877    7899999999999999999999988875432124577888754  45555577


Q ss_pred             CCCCCCCCCCEEEecCCCCcccceEEEeeC-CcEEEcC-CCCChh-hhcccccchHHHHHHHHhhcCCCCCCeEEEeCCC
Q 023007          122 SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQ-SVWHKVS-KDSPME-YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT  198 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~-~~l~~ip-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  198 (288)
                      +++++|++||+|+++    |+|+||++++. ..++++| +++++. +++.++++++|||+++.+.+++++|++|+|+|++
T Consensus        86 ~~v~~~~vGd~V~~~----g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~  161 (338)
T cd08295          86 SGNPDFKVGDLVWGF----TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAAS  161 (338)
T ss_pred             cCCCCCCCCCEEEec----CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence            888899999999865    68999999999 7999995 678887 7999999999999999888999999999999999


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCc--ccHHHHHHHhcCCCCccEEEECCCcccHH
Q 023007          199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSAS  275 (288)
Q Consensus       199 g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~--~~~~~i~~~~~~~g~~D~v~d~~g~~~~~  275 (288)
                      |++|++++|+|+.+|+++++++    .++++.+++++ +|+++++++..  ...+.+.++++ .+ +|++|||+|+....
T Consensus       162 G~vG~~aiqlAk~~G~~Vi~~~----~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~g-vd~v~d~~g~~~~~  235 (338)
T cd08295         162 GAVGQLVGQLAKLKGCYVVGSA----GSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NG-IDIYFDNVGGKMLD  235 (338)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CC-cEEEEECCCHHHHH
Confidence            9999999999999999999888    57889999988 99999999653  33455666665 34 99999999997779


Q ss_pred             HHHhhccCCCeeC
Q 023007          276 KVLKFLRFREEQW  288 (288)
Q Consensus       276 ~a~~~l~~~G~~v  288 (288)
                      .++++++++|+|+
T Consensus       236 ~~~~~l~~~G~iv  248 (338)
T cd08295         236 AVLLNMNLHGRIA  248 (338)
T ss_pred             HHHHHhccCcEEE
Confidence            9999999999985

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=6.7e-34  Score=259.65  Aligned_cols=240  Identities=23%  Similarity=0.319  Sum_probs=204.5

Q ss_pred             CCccceEEEEc--cCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCC---------CCCCcccccc
Q 023007           44 MSPPSKAVVYE--REGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR---------PKVPAVGGYE  112 (288)
Q Consensus        44 ~~~~~~a~~~~--~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~---------~~~p~~~G~e  112 (288)
                      .|.+|+++++.  +.+++.+.+++++.|.|.+.++||+|++.++++|++|.....+.....         ...+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            57789999885  344444458899999999999999999999999999998876641100         0112478999


Q ss_pred             eEEEEEEecCCCCCCCCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhh
Q 023007          113 GVGEVYSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEY  165 (288)
Q Consensus       113 ~~G~V~~~G~~~~~~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~  165 (288)
                      ++|+|+++|++++++++||+|++.+.                           ..|+|++|++++...++++|+++++.+
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~  168 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE  168 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            99999999999999999999998752                           248999999999999999999999999


Q ss_pred             hcccccchHHHHHHHHhh--cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe
Q 023007          166 AATIIVNPLTALRMLEDF--TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (288)
Q Consensus       166 aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~  243 (288)
                      ++.++.++.|||+++...  +++++|++|+|+|++|++|++++++|+.+|+++++++    .++++.+.++++|++++++
T Consensus       169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~----~s~~~~~~~~~~G~~~~i~  244 (393)
T cd08246         169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVV----SSEEKAEYCRALGAEGVIN  244 (393)
T ss_pred             HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHcCCCEEEc
Confidence            999999999999998765  6789999999999999999999999999999998887    5788999999999999998


Q ss_pred             CCcc-----------------------cHHHHHHHhcCC-CCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          244 ESQL-----------------------EVKNVKGLLANL-PEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       244 ~~~~-----------------------~~~~i~~~~~~~-g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +++.                       +.+.+.+++++. + +|++|||+|+.....++++++++|+|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g-~d~vid~~g~~~~~~~~~~l~~~G~~v  312 (393)
T cd08246         245 RRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGRED-PDIVFEHPGRATFPTSVFVCDRGGMVV  312 (393)
T ss_pred             ccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCC-CeEEEECCchHhHHHHHHHhccCCEEE
Confidence            6432                       235677788876 5 999999999877789999999999985

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=8e-34  Score=252.77  Aligned_cols=225  Identities=24%  Similarity=0.260  Sum_probs=191.3

Q ss_pred             cceEEEEccC--CC-CCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           47 PSKAVVYERE--GP-PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        47 ~~~a~~~~~~--g~-~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      +||+|++.++  +. +.+.+++++.+.|+++++||+|||.++++|+.|......  .  ...|.++|+|++|+|++   .
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~--~~~p~v~G~e~~G~V~~---~   74 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L--NEGDTMIGTQVAKVIES---K   74 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C--CCCCcEecceEEEEEec---C
Confidence            5899999993  44 336699999999999999999999999999987652111  1  13578999999999985   4


Q ss_pred             CCCCCCCCEEEecCCCCcccceEEEeeCC---cEEEcCCCCC-----hhhhcccccchHHHHHHHHhhcCCCCCCeEEEe
Q 023007          124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQS---VWHKVSKDSP-----MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~---~l~~ip~~~~-----~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  195 (288)
                      +++|++||+|+++    ++|++|.+++.+   .++++|++++     ...+++++.+++|||+++.+.+++++|++|+|+
T Consensus        75 ~~~~~~Gd~V~~~----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~  150 (329)
T cd08294          75 NSKFPVGTIVVAS----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVN  150 (329)
T ss_pred             CCCCCCCCEEEee----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence            5679999999975    478999999999   9999999998     223346788999999999888999999999999


Q ss_pred             CCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccH
Q 023007          196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       196 g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                      |++|++|++++|+|+.+|+++++++    .++++.++++++|+++++++++.. .+.+.++++ .+ +|++|||+|++..
T Consensus       151 ga~g~vG~~aiqlA~~~G~~vi~~~----~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~g-vd~vld~~g~~~~  224 (329)
T cd08294         151 GAAGAVGSLVGQIAKIKGCKVIGCA----GSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-DG-IDCYFDNVGGEFS  224 (329)
T ss_pred             cCccHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CC-cEEEEECCCHHHH
Confidence            9999999999999999999999888    688999999999999999987654 456777665 34 9999999999777


Q ss_pred             HHHHhhccCCCeeC
Q 023007          275 SKVLKFLRFREEQW  288 (288)
Q Consensus       275 ~~a~~~l~~~G~~v  288 (288)
                      ..++++++++|+|+
T Consensus       225 ~~~~~~l~~~G~iv  238 (329)
T cd08294         225 STVLSHMNDFGRVA  238 (329)
T ss_pred             HHHHHhhccCCEEE
Confidence            99999999999985

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=8.5e-34  Score=252.60  Aligned_cols=211  Identities=22%  Similarity=0.265  Sum_probs=181.3

Q ss_pred             cceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCC
Q 023007           61 SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS  140 (288)
Q Consensus        61 ~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~  140 (288)
                      +++++.+.+.|++++|||+|||.++++|+.++.   |.+... ..|.++|.|++|+|++.|   ++|++||+|+++    
T Consensus        17 ~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~---~~~~~GdrV~~~----   85 (325)
T TIGR02825        17 SDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKN---VALPKGTIVLAS----   85 (325)
T ss_pred             CceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCC---CCCCCCCEEEEe----
Confidence            458899999999999999999999999997643   333221 236799999999999976   469999999975    


Q ss_pred             cccceEEEeeCCcEEEc----CCCCChhhh-cccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe
Q 023007          141 GTWQSYVVKDQSVWHKV----SKDSPMEYA-ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH  215 (288)
Q Consensus       141 G~~a~~~~~~~~~l~~i----p~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~  215 (288)
                      ++|++|++++.+.+.++    |++++++++ +++++++.|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++
T Consensus        86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~  165 (325)
T TIGR02825        86 PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCK  165 (325)
T ss_pred             cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCE
Confidence            37899999999888877    899999987 6888899999999988899999999999999999999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cH-HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          216 SINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       216 vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +++++    .++++.++++++|+++++++++. +. +.+...++ .+ +|++|||+|++.+..++++++++|+||
T Consensus       166 Vi~~~----~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~-~g-vdvv~d~~G~~~~~~~~~~l~~~G~iv  234 (325)
T TIGR02825       166 VVGAA----GSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASP-DG-YDCYFDNVGGEFSNTVIGQMKKFGRIA  234 (325)
T ss_pred             EEEEe----CCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCC-CC-eEEEEECCCHHHHHHHHHHhCcCcEEE
Confidence            99888    57889999999999999998763 34 33444443 34 999999999988899999999999985

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.6e-33  Score=252.09  Aligned_cols=232  Identities=27%  Similarity=0.321  Sum_probs=203.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      ||+++++.++++   +++.+.+.|++.+++|+||+.++++|+.|+..+.|.++.  ...+|.++|+|++|+|+++|+++.
T Consensus         1 ~ka~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~   77 (340)
T cd05284           1 MKAARLYEYGKP---LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD   77 (340)
T ss_pred             CeeeEeccCCCC---ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence            689999987653   788888988899999999999999999999988876542  335678999999999999999999


Q ss_pred             CCCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007          126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (288)
Q Consensus       126 ~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~  179 (288)
                      +|++||+|+++..                          ..|+|++|+.++.++++++|+++++++++.++..+.|||++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~  157 (340)
T cd05284          78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA  157 (340)
T ss_pred             cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence            9999999998641                          15899999999999999999999999999999999999999


Q ss_pred             HHhh-cCCCCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhc
Q 023007          180 LEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       180 l~~~-~~~~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~  257 (288)
                      +.+. ..+.+|++|+|+|+ |.+|++++++|+.+| .+++.++    .++++.+.++++|++++++++....+.+.++++
T Consensus       158 l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~  232 (340)
T cd05284         158 VKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVD----RSEEALKLAERLGADHVLNASDDVVEEVRELTG  232 (340)
T ss_pred             HHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEe----CCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhC
Confidence            9876 46889999999996 679999999999999 7999887    578888899999999999987765567777777


Q ss_pred             CCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGG-NSASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v  288 (288)
                      +.+ +|+++||+|+ ...+.++++|+++|+|+
T Consensus       233 ~~~-~dvvld~~g~~~~~~~~~~~l~~~g~~i  263 (340)
T cd05284         233 GRG-ADAVIDFVGSDETLALAAKLLAKGGRYV  263 (340)
T ss_pred             CCC-CCEEEEcCCCHHHHHHHHHHhhcCCEEE
Confidence            655 9999999997 44599999999999984

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=1.9e-33  Score=250.39  Aligned_cols=235  Identities=25%  Similarity=0.309  Sum_probs=208.7

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      +||++.+.++|.+ ..+++++.+.|.+.++||+||+.++++|+.|.....+.++.. ..|..+|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~vG~~v~~   78 (327)
T PRK10754          1 MAKRIEFHKHGGP-EVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP-SLPSGLGTEAAGVVSKVGSGVKH   78 (327)
T ss_pred             CceEEEEeccCCh-hHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC-CCCCccCcceEEEEEEeCCCCCC
Confidence            5899999988876 358999999999999999999999999999998887765432 35778999999999999999999


Q ss_pred             CCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHH
Q 023007          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII  206 (288)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~  206 (288)
                      +++||+|+......|+|++|+.++.+.++++|+++++.+++.++..+.+||+++...+++++|++|+|+|++|.+|++++
T Consensus        79 ~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~  158 (327)
T PRK10754         79 IKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC  158 (327)
T ss_pred             CCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHH
Confidence            99999998764335899999999999999999999999999999899999999988889999999999999899999999


Q ss_pred             HHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCC
Q 023007          207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFRE  285 (288)
Q Consensus       207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G  285 (288)
                      ++++.+|++++.++    .++++.+.++++|++++++.+.. ..+.+.+++++.+ +|++|||+|+.....++++++++|
T Consensus       159 ~lak~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~~~~~~~~~~~~l~~~g  233 (327)
T PRK10754        159 QWAKALGAKLIGTV----GSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKK-VRVVYDSVGKDTWEASLDCLQRRG  233 (327)
T ss_pred             HHHHHcCCEEEEEe----CCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCC-eEEEEECCcHHHHHHHHHHhccCC
Confidence            99999999999888    57888889999999999887654 3466778888766 999999999877788999999999


Q ss_pred             eeC
Q 023007          286 EQW  288 (288)
Q Consensus       286 ~~v  288 (288)
                      +++
T Consensus       234 ~~v  236 (327)
T PRK10754        234 LMV  236 (327)
T ss_pred             EEE
Confidence            985

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.4e-33  Score=252.96  Aligned_cols=230  Identities=26%  Similarity=0.266  Sum_probs=186.2

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCc-ccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA-VGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V~~~G~~~~~  126 (288)
                      |++++++.++..   .++++.+.|.+.++||+|||.+++||++|++.+.+..+.. ..+. ++|||++|+|+++| .++.
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~-~~~~~i~GHE~~G~V~evG-~~~~   75 (350)
T COG1063           1 MKAAVVYVGGGD---VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV-PPGDIILGHEFVGEVVEVG-VVRG   75 (350)
T ss_pred             CceeEEEecCCc---cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC-CCCCcccCccceEEEEEec-cccC
Confidence            567777776653   3356666666899999999999999999999999876554 3334 99999999999999 7788


Q ss_pred             CCCCCEEEecCCC-------------------------------CcccceEEEeeCCcEEE-cCCCCChhhhcccccchH
Q 023007          127 LAPGDWVIPSPPS-------------------------------SGTWQSYVVKDQSVWHK-VSKDSPMEYAATIIVNPL  174 (288)
Q Consensus       127 ~~~Gd~V~~~~~~-------------------------------~G~~a~~~~~~~~~l~~-ip~~~~~~~aa~l~~~~~  174 (288)
                      +++||||++.+..                               +|+++||+.+|.+++++ +|++++ .+++++..++.
T Consensus        76 ~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~-~~~aal~epla  154 (350)
T COG1063          76 FKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGID-EEAAALTEPLA  154 (350)
T ss_pred             CCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCC-hhhhhhcChhh
Confidence            9999999998532                               48999999999755555 578874 55555555899


Q ss_pred             HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCc-ccHHHH
Q 023007          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ-LEVKNV  252 (288)
Q Consensus       175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~-~~~~~i  252 (288)
                      +++++........++.+|+|+|+ |++|++++++++.+|+..+++++   .+++|++++++ .|++.+++... .....+
T Consensus       155 ~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d---~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~  230 (350)
T COG1063         155 TAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVD---RSPERLELAKEAGGADVVVNPSEDDAGAEI  230 (350)
T ss_pred             hhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeC---CCHHHHHHHHHhCCCeEeecCccccHHHHH
Confidence            99877555556666669999999 99999999999999997777765   58999999998 66777776655 345678


Q ss_pred             HHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      .+++++.| +|++|||+|.... +.++++++++|+++
T Consensus       231 ~~~t~g~g-~D~vie~~G~~~~~~~ai~~~r~gG~v~  266 (350)
T COG1063         231 LELTGGRG-ADVVIEAVGSPPALDQALEALRPGGTVV  266 (350)
T ss_pred             HHHhCCCC-CCEEEECCCCHHHHHHHHHHhcCCCEEE
Confidence            88898887 9999999997765 99999999999974

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-33  Score=248.05  Aligned_cols=235  Identities=29%  Similarity=0.352  Sum_probs=207.4

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      |||++++.+++... .+.+++.+.|.+.++|++||+.++++|+.|.....+..+.....|.++|+|++|+|+++|+++.+
T Consensus         1 ~m~a~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~   79 (334)
T PTZ00354          1 MMRAVTLKGFGGVD-VLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKR   79 (334)
T ss_pred             CcEEEEEEecCCCc-ceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCC
Confidence            68999999887643 37788888888899999999999999999999888765443345678999999999999999999


Q ss_pred             CCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHH
Q 023007          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII  206 (288)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~  206 (288)
                      +++||+|+++.. .|++++|++++.++++++|+++++.+++.++.++.+||+++...+++++|++|+|+|++|++|++++
T Consensus        80 ~~~Gd~V~~~~~-~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~  158 (334)
T PTZ00354         80 FKEGDRVMALLP-GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAA  158 (334)
T ss_pred             CCCCCEEEEecC-CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence            999999998753 4899999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             HHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc--cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCC
Q 023007          207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR  284 (288)
Q Consensus       207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~  284 (288)
                      ++|+.+|++++.++    .++++.+.++++|.+++++++..  ..+.+..++++.+ +|++|||+|+.....++++++++
T Consensus       159 ~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~  233 (334)
T PTZ00354        159 QLAEKYGAATIITT----SSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKG-VNLVLDCVGGSYLSETAEVLAVD  233 (334)
T ss_pred             HHHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCC-ceEEEECCchHHHHHHHHHhccC
Confidence            99999999988877    57888899999999999987653  3466777777666 99999999988789999999999


Q ss_pred             CeeC
Q 023007          285 EEQW  288 (288)
Q Consensus       285 G~~v  288 (288)
                      |+|+
T Consensus       234 g~~i  237 (334)
T PTZ00354        234 GKWI  237 (334)
T ss_pred             CeEE
Confidence            9985

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=3.8e-33  Score=252.34  Aligned_cols=230  Identities=27%  Similarity=0.319  Sum_probs=200.2

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      +||++++.+++.+   +++++.+.|++.++||+||+.++++|++|+....|.++.  ..|.++|||++|+|+++|+++.+
T Consensus         2 ~~~a~~~~~~~~~---~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~   76 (365)
T cd08278           2 KTTAAVVREPGGP---FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPT--PLPAVLGHEGAGVVEAVGSAVTG   76 (365)
T ss_pred             ccEEeeeccCCCc---ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCC--CCCcccccceeEEEEEeCCCccc
Confidence            6899999987654   778899999999999999999999999999998886552  45789999999999999999999


Q ss_pred             CCCCCEEEecC------------------------------------------------CCCcccceEEEeeCCcEEEcC
Q 023007          127 LAPGDWVIPSP------------------------------------------------PSSGTWQSYVVKDQSVWHKVS  158 (288)
Q Consensus       127 ~~~Gd~V~~~~------------------------------------------------~~~G~~a~~~~~~~~~l~~ip  158 (288)
                      |++||+|++..                                                ...|+|++|+.++.++++++|
T Consensus        77 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP  156 (365)
T cd08278          77 LKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD  156 (365)
T ss_pred             CCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence            99999999521                                                014789999999999999999


Q ss_pred             CCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCC
Q 023007          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG  237 (288)
Q Consensus       159 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g  237 (288)
                      +++++.+++.+++++.+||+++.....+++|++|+|+|+ |++|++++++|+.+|++ ++++.    .++++.+.++++|
T Consensus       157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~----~~~~k~~~~~~~g  231 (365)
T cd08278         157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVD----IVDSRLELAKELG  231 (365)
T ss_pred             CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcC
Confidence            999999999999999999999988889999999999976 99999999999999996 55555    5788888999999


Q ss_pred             CCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          238 ADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       238 ~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      ++.+++++.. ..+.+.+++ +.+ +|+++||+|+.. ...++++++++|+++
T Consensus       232 ~~~~i~~~~~~~~~~v~~~~-~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v  282 (365)
T cd08278         232 ATHVINPKEEDLVAAIREIT-GGG-VDYALDTTGVPAVIEQAVDALAPRGTLA  282 (365)
T ss_pred             CcEEecCCCcCHHHHHHHHh-CCC-CcEEEECCCCcHHHHHHHHHhccCCEEE
Confidence            9999988764 346677777 545 999999999754 499999999999985

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-33  Score=249.22  Aligned_cols=231  Identities=22%  Similarity=0.249  Sum_probs=189.2

Q ss_pred             cceEEEEccCCCC---CcceEEEEc---CCC-CCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCccccc--ceEEEE
Q 023007           47 PSKAVVYEREGPP---DSVIKMIEL---PPV-EVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGY--EGVGEV  117 (288)
Q Consensus        47 ~~~a~~~~~~g~~---~~~~~~~~~---~~p-~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V  117 (288)
                      ++|+|++....+.   .+.+++++.   +.| +++++|||||+.++++||.|+..+.+.... ...|.++|+  |++|+|
T Consensus         8 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~-~~~p~~~G~~~~~~G~v   86 (348)
T PLN03154          8 ENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS-YLPPFVPGQRIEGFGVS   86 (348)
T ss_pred             cceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC-CCCCcCCCCeeEeeEEE
Confidence            3577777543321   134777774   555 357999999999999999998755432221 234788997  889999


Q ss_pred             EEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCc--EEE--cCCCCChh-hhcccccchHHHHHHHHhhcCCCCCCeE
Q 023007          118 YSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSV--WHK--VSKDSPME-YAATIIVNPLTALRMLEDFTTLNSGDSI  192 (288)
Q Consensus       118 ~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~--l~~--ip~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~v  192 (288)
                      ..+|+++++|++||+|+++    |+|++|..++...  +++  +|+++++. +++.++++++|||+++.+.+++++|++|
T Consensus        87 ~~vg~~v~~~~~Gd~V~~~----~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~V  162 (348)
T PLN03154         87 KVVDSDDPNFKPGDLISGI----TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSV  162 (348)
T ss_pred             EEEecCCCCCCCCCEEEec----CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEE
Confidence            9999999999999999864    6899999999753  544  48999986 6889999999999999888899999999


Q ss_pred             EEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCc--ccHHHHHHHhcCCCCccEEEECC
Q 023007          193 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQ--LEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       193 lI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~--~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      ||+|++|++|++++|+|+.+|++|++++    .++++.++++ ++|+++++++++  ...+.+.+++++ + +|++|||+
T Consensus       163 lV~GaaG~vG~~aiqlAk~~G~~Vi~~~----~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~-g-vD~v~d~v  236 (348)
T PLN03154        163 FVSAASGAVGQLVGQLAKLHGCYVVGSA----GSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPE-G-IDIYFDNV  236 (348)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCC-C-cEEEEECC
Confidence            9999999999999999999999999887    5788888887 799999999874  334566666653 4 99999999


Q ss_pred             CcccHHHHHhhccCCCeeC
Q 023007          270 GGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       270 g~~~~~~a~~~l~~~G~~v  288 (288)
                      |+..+..++++++++|+++
T Consensus       237 G~~~~~~~~~~l~~~G~iv  255 (348)
T PLN03154        237 GGDMLDAALLNMKIHGRIA  255 (348)
T ss_pred             CHHHHHHHHHHhccCCEEE
Confidence            9987799999999999985

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.6e-33  Score=252.46  Aligned_cols=217  Identities=17%  Similarity=0.156  Sum_probs=175.9

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC---CCCCCcccccceEEEEEEecCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV---RPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~---~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      .+++++++++.    +++++.|.|. +++||+|||.++|||++|.+.+.|.+..   ...+|.++|||++|+|+++|.+ 
T Consensus         3 ~~~~~~~~~~~----~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-   76 (341)
T cd08237           3 NQVYRLVRPKF----FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-   76 (341)
T ss_pred             ccceEEeccce----EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC-
Confidence            47788888775    8899999985 9999999999999999999999886532   1256899999999999998764 


Q ss_pred             CCCCCCCEEEecCC-----------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          125 TRLAPGDWVIPSPP-----------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~-----------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                       +|++||+|+..+.                       .+|+|+||+++|.++++++|+++++++|+.+. ++.++|+++.
T Consensus        77 -~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~  154 (341)
T cd08237          77 -TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAIS  154 (341)
T ss_pred             -ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHH
Confidence             7999999987532                       14889999999999999999999998877554 7889999886


Q ss_pred             hh--cCCCCCCeEEEeCCCChHHHHHHHHHHH-cC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhc
Q 023007          182 DF--TTLNSGDSIVQNGATSIVGQCIIQIARH-RG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       182 ~~--~~~~~g~~vlI~g~~g~vG~~a~~la~~-~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~  257 (288)
                      ..  ..+++|++|+|+|+ |++|++++|+++. +| .+++++.    .+++|++++++++.+..++          .+..
T Consensus       155 ~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~----~~~~k~~~a~~~~~~~~~~----------~~~~  219 (341)
T cd08237         155 RFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFG----KHQEKLDLFSFADETYLID----------DIPE  219 (341)
T ss_pred             HHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEe----CcHhHHHHHhhcCceeehh----------hhhh
Confidence            53  45689999999997 9999999999986 55 5777776    5788888888766553321          1122


Q ss_pred             CCCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      +.+ +|+||||+|+.    .++.++++++++|+++
T Consensus       220 ~~g-~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv  253 (341)
T cd08237         220 DLA-VDHAFECVGGRGSQSAINQIIDYIRPQGTIG  253 (341)
T ss_pred             ccC-CcEEEECCCCCccHHHHHHHHHhCcCCcEEE
Confidence            223 99999999953    3488999999999985

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=8.4e-33  Score=248.72  Aligned_cols=229  Identities=24%  Similarity=0.226  Sum_probs=197.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++.    +.+++.+.|.+.++||+||+.++++|++|++.+.+.+.. ...|.++|||++|+|+++|+++++|
T Consensus         1 mka~~~~~~~~----~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~   75 (351)
T cd08285           1 MKAFAMLGIGK----VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDF   75 (351)
T ss_pred             CceEEEccCCc----cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCcc
Confidence            68999998775    678899988899999999999999999999888776543 2558899999999999999999999


Q ss_pred             CCCCEEEecCC-----------------------------CCcccceEEEeeCC--cEEEcCCCCChhhhcccccchHHH
Q 023007          128 APGDWVIPSPP-----------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTA  176 (288)
Q Consensus       128 ~~Gd~V~~~~~-----------------------------~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~ta  176 (288)
                      ++||+|++.+.                             ..|+|++|+.++..  .++++|+++++.+++.++.++.||
T Consensus        76 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta  155 (351)
T cd08285          76 KPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTG  155 (351)
T ss_pred             CCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhH
Confidence            99999998431                             25899999999974  899999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHH
Q 023007          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKG  254 (288)
Q Consensus       177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~  254 (288)
                      |+++ ....+++|++|||+|+ |++|++++|+|+.+|++ ++++.    .++++.+.++++|++++++++.. ..+.+..
T Consensus       156 ~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~  229 (351)
T cd08285         156 FHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVG----SRPNRVELAKEYGATDIVDYKNGDVVEQILK  229 (351)
T ss_pred             HHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHcCCceEecCCCCCHHHHHHH
Confidence            9996 5588999999999975 99999999999999996 55555    47788899999999999988654 3466777


Q ss_pred             HhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      ++.+.+ +|+++||+|+.. ...++++++++|+++
T Consensus       230 ~~~~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v  263 (351)
T cd08285         230 LTGGKG-VDAVIIAGGGQDTFEQALKVLKPGGTIS  263 (351)
T ss_pred             HhCCCC-CcEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence            776665 999999999754 499999999999985

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.7e-33  Score=248.89  Aligned_cols=216  Identities=18%  Similarity=0.187  Sum_probs=174.8

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecC-hHHHHHHhCCCCCC--CCCCcccccceEEEEEEecCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPIN-PSDINRIEGVYPVR--PKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      +||++++.+++.    +++++.|.|++.++||+||+.++++| ++|.+.+.|.++..  ..+|.++|||++|+|+++|++
T Consensus         1 ~~ka~~~~~~~~----l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~   76 (308)
T TIGR01202         1 KTQAIVLSGPNQ----IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD   76 (308)
T ss_pred             CceEEEEeCCCe----EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence            468899987654    88999999999999999999999996 69998888865432  256899999999999999999


Q ss_pred             CCCCCCCCEEEecCC--------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEe
Q 023007          124 VTRLAPGDWVIPSPP--------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~--------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  195 (288)
                      + +|++||+|+....        ..|+|+||+.+|.+.++++|++++++. +.++ ++.|||+++.+ . ..++++++|+
T Consensus        77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~  151 (308)
T TIGR01202        77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIV  151 (308)
T ss_pred             C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEE
Confidence            8 6999999997431        159999999999999999999999865 4444 57899999865 3 3468899999


Q ss_pred             CCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH-
Q 023007          196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-  274 (288)
Q Consensus       196 g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~-  274 (288)
                      |+ |++|++++|+|+.+|++++++++   .++++++.++++   +++|+.+.         .+. ++|++|||+|+... 
T Consensus       152 G~-G~vG~~a~q~ak~~G~~~v~~~~---~~~~rl~~a~~~---~~i~~~~~---------~~~-g~Dvvid~~G~~~~~  214 (308)
T TIGR01202       152 GH-GTLGRLLARLTKAAGGSPPAVWE---TNPRRRDGATGY---EVLDPEKD---------PRR-DYRAIYDASGDPSLI  214 (308)
T ss_pred             CC-CHHHHHHHHHHHHcCCceEEEeC---CCHHHHHhhhhc---cccChhhc---------cCC-CCCEEEECCCCHHHH
Confidence            86 99999999999999999776664   356666665443   34544221         122 39999999999764 


Q ss_pred             HHHHhhccCCCeeC
Q 023007          275 SKVLKFLRFREEQW  288 (288)
Q Consensus       275 ~~a~~~l~~~G~~v  288 (288)
                      +.++++++++|+++
T Consensus       215 ~~~~~~l~~~G~iv  228 (308)
T TIGR01202       215 DTLVRRLAKGGEIV  228 (308)
T ss_pred             HHHHHhhhcCcEEE
Confidence            99999999999985

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=8.3e-33  Score=252.86  Aligned_cols=240  Identities=24%  Similarity=0.298  Sum_probs=203.1

Q ss_pred             CCccceEEEEcc--CCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC---------CCCCC-ccccc
Q 023007           44 MSPPSKAVVYER--EGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV---------RPKVP-AVGGY  111 (288)
Q Consensus        44 ~~~~~~a~~~~~--~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~---------~~~~p-~~~G~  111 (288)
                      ++.+||++++..  .+++.+.+++.+.|.|.+.+++++|++.++++|+.|.....+....         ....| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            567899999965  6766566999999999999999999999999999998766543210         00123 27999


Q ss_pred             ceEEEEEEecCCCCCCCCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChh
Q 023007          112 EGVGEVYSVGSAVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPME  164 (288)
Q Consensus       112 e~~G~V~~~G~~~~~~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~  164 (288)
                      |++|+|+++|+++++|++||+|++.+.                           ..|+|++|+.++.++++++|+++++.
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~  163 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE  163 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence            999999999999999999999998642                           24899999999999999999999999


Q ss_pred             hhcccccchHHHHHHHHh--hcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE
Q 023007          165 YAATIIVNPLTALRMLED--FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (288)
Q Consensus       165 ~aa~l~~~~~ta~~~l~~--~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~  242 (288)
                      +++.+..++.+||+++..  ..++.+|++|+|+|++|++|++++++++.+|+++++++    .++++.+.++++|++.++
T Consensus       164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~----~~~~~~~~~~~~g~~~~v  239 (398)
T TIGR01751       164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVV----SSPEKAEYCRELGAEAVI  239 (398)
T ss_pred             HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCCEEe
Confidence            999999999999999865  47789999999999999999999999999999988887    578888999999999999


Q ss_pred             eCCcc-----------------------cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          243 TESQL-----------------------EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       243 ~~~~~-----------------------~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      |+++.                       +.+.+.+++++.+ +|++|||+|+.....++++++++|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~d~vld~~g~~~~~~~~~~l~~~G~~v  307 (398)
T TIGR01751       240 DRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGED-PDIVFEHPGRATFPTSVFVCRRGGMVV  307 (398)
T ss_pred             cCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCC-ceEEEECCcHHHHHHHHHhhccCCEEE
Confidence            87542                       1234666777655 999999999877788999999999875

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.1e-32  Score=244.41  Aligned_cols=227  Identities=22%  Similarity=0.289  Sum_probs=196.3

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++..   +++++.|.|++.++||+|++.++++|+.|...+.|..+. ...|.++|||++|+|+++|+++++|
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~vG~~v~~~   76 (333)
T cd08296           1 YKAVQVTEPGGP---LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRIDAVGEGVSRW   76 (333)
T ss_pred             CeEEEEccCCCC---ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEEEECCCCccC
Confidence            689999988543   889999999999999999999999999999988886543 2457899999999999999999999


Q ss_pred             CCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|++.+                           ...|++++|+.++.+.++++|+++++.+++.++.++.++|+++
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~  156 (333)
T cd08296          77 KVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL  156 (333)
T ss_pred             CCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence            9999998631                           1148999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCC
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANL  259 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~  259 (288)
                      ... .+.+|++|+|+| +|.+|++++++|+.+|++++.++    .++++.+.++++|++++++++... .+.+.++  + 
T Consensus       157 ~~~-~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~--~-  227 (333)
T cd08296         157 RNS-GAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAIS----RGSDKADLARKLGAHHYIDTSKEDVAEALQEL--G-  227 (333)
T ss_pred             Hhc-CCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEe----CChHHHHHHHHcCCcEEecCCCccHHHHHHhc--C-
Confidence            764 899999999999 59999999999999999999888    578889999999999999887643 3444444  2 


Q ss_pred             CCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGG-NSASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v  288 (288)
                      + +|+++||.|. .....++++++++|+|+
T Consensus       228 ~-~d~vi~~~g~~~~~~~~~~~l~~~G~~v  256 (333)
T cd08296         228 G-AKLILATAPNAKAISALVGGLAPRGKLL  256 (333)
T ss_pred             C-CCEEEECCCchHHHHHHHHHcccCCEEE
Confidence            3 9999999974 44588999999999985

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.4e-32  Score=244.72  Aligned_cols=233  Identities=29%  Similarity=0.365  Sum_probs=203.2

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++.  ..+++++.+.|.+.+++++||+.++++|++|...+.+..+.....|..+|+|++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~   78 (341)
T cd08297           1 MKAAVVEEFGE--KPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGL   78 (341)
T ss_pred             CceEEeeccCC--CCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCC
Confidence            78999988772  2388999999999999999999999999999998887665434556789999999999999999999


Q ss_pred             CCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|++.+                           ...|++++|+.++.+.++++|+++++.+++.++..+.|||+++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~  158 (341)
T cd08297          79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL  158 (341)
T ss_pred             CCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHH
Confidence            9999999752                           0158999999999999999999999999999999999999998


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCC
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANL  259 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~  259 (288)
                      .. .+++++++|+|+|+++.+|++++++|+++|++++.++    .++++.+.++++|++++++++.. ..+.+.+++++.
T Consensus       159 ~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~  233 (341)
T cd08297         159 KK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAID----VGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGG  233 (341)
T ss_pred             Hh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCC
Confidence            77 5899999999999988899999999999999999998    57888888899999999988764 446677777666


Q ss_pred             CCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      + +|+++||.++.. ...++++++++|+++
T Consensus       234 ~-vd~vl~~~~~~~~~~~~~~~l~~~g~~v  262 (341)
T cd08297         234 G-AHAVVVTAVSAAAYEQALDYLRPGGTLV  262 (341)
T ss_pred             C-CCEEEEcCCchHHHHHHHHHhhcCCEEE
Confidence            5 999999777544 489999999999985

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-32  Score=246.64  Aligned_cols=232  Identities=26%  Similarity=0.364  Sum_probs=194.9

Q ss_pred             ceEEEEccCCCCCcceEEEE-cCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC-------------------CCCCCc
Q 023007           48 SKAVVYEREGPPDSVIKMIE-LPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------------------RPKVPA  107 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~-~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~-------------------~~~~p~  107 (288)
                      ||++.+.+++.+. .+.+.+ .+.|.+.+++|+||+.++++|++|...+.|.++.                   ..++|.
T Consensus         1 ~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~   79 (350)
T cd08274           1 MRAVLLTGHGGLD-KLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR   79 (350)
T ss_pred             CeEEEEeccCCcc-ceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence            6888888766543 255654 4667789999999999999999999988775431                   235678


Q ss_pred             ccccceEEEEEEecCCCCCCCCCCEEEecCC------------------CCcccceEEEeeCCcEEEcCCCCChhhhccc
Q 023007          108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATI  169 (288)
Q Consensus       108 ~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l  169 (288)
                      ++|||++|+|+++|+++++|++||+|++.+.                  ..|++++|+.++.+.++++|+++++.+++.+
T Consensus        80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l  159 (350)
T cd08274          80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF  159 (350)
T ss_pred             ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence            9999999999999999999999999998421                  1489999999999999999999999999999


Q ss_pred             ccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH
Q 023007          170 IVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV  249 (288)
Q Consensus       170 ~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  249 (288)
                      ++++.+||+++ ....+++|++|+|+|++|++|++++++|+.+|++++.++    .++ +.+.++++|++.+.+......
T Consensus       160 ~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~----~~~-~~~~~~~~g~~~~~~~~~~~~  233 (350)
T cd08274         160 PCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVA----GAA-KEEAVRALGADTVILRDAPLL  233 (350)
T ss_pred             ccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEe----Cch-hhHHHHhcCCeEEEeCCCccH
Confidence            99999999998 568899999999999999999999999999999998887    344 778888999987666554444


Q ss_pred             HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          250 KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       250 ~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      .. ...+.+.+ +|++|||+|++..+.++++++++|+++
T Consensus       234 ~~-~~~~~~~~-~d~vi~~~g~~~~~~~~~~l~~~G~~v  270 (350)
T cd08274         234 AD-AKALGGEP-VDVVADVVGGPLFPDLLRLLRPGGRYV  270 (350)
T ss_pred             HH-HHhhCCCC-CcEEEecCCHHHHHHHHHHhccCCEEE
Confidence            44 45566655 999999999987799999999999985

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=1.8e-32  Score=243.74  Aligned_cols=232  Identities=22%  Similarity=0.251  Sum_probs=195.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+.+++ +++.+++.|.|.+.++||+||+.++++|+.|.....+.......+|.++|||++|+|++.  ++.+|
T Consensus         1 ~~a~~~~~~~~~-~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~--~~~~~   77 (326)
T cd08289           1 FQALVVEKDEDD-VSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVES--NDPRF   77 (326)
T ss_pred             CeeEEEeccCCc-ceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEc--CCCCC
Confidence            689999988765 358889999999999999999999999999987654322222245788999999999985  45779


Q ss_pred             CCCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcC---CCCCCeEEEeCCCC
Q 023007          128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT---LNSGDSIVQNGATS  199 (288)
Q Consensus       128 ~~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~vlI~g~~g  199 (288)
                      ++||+|++...     ..|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.....   ..++++|+|+|++|
T Consensus        78 ~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g  157 (326)
T cd08289          78 KPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATG  157 (326)
T ss_pred             CCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCc
Confidence            99999998752     25899999999999999999999999999999999999988865432   34578999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHh
Q 023007          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (288)
Q Consensus       200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~  279 (288)
                      .+|++++++|+.+|+++++++    .++++.+.++++|++++++.++...+.+..++ +. ++|++|||+|+.....+++
T Consensus       158 ~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~-~~-~~d~vld~~g~~~~~~~~~  231 (326)
T cd08289         158 GVGSLAVSILAKLGYEVVAST----GKADAADYLKKLGAKEVIPREELQEESIKPLE-KQ-RWAGAVDPVGGKTLAYLLS  231 (326)
T ss_pred             hHHHHHHHHHHHCCCeEEEEe----cCHHHHHHHHHcCCCEEEcchhHHHHHHHhhc-cC-CcCEEEECCcHHHHHHHHH
Confidence            999999999999999999888    57888999999999999987765444555554 33 4999999999977799999


Q ss_pred             hccCCCeeC
Q 023007          280 FLRFREEQW  288 (288)
Q Consensus       280 ~l~~~G~~v  288 (288)
                      +++++|+++
T Consensus       232 ~l~~~G~~i  240 (326)
T cd08289         232 TLQYGGSVA  240 (326)
T ss_pred             HhhcCCEEE
Confidence            999999985

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=2.3e-32  Score=247.80  Aligned_cols=230  Identities=23%  Similarity=0.256  Sum_probs=197.3

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      +||+.++..+++.   +++++.|.|++.++||+||+.++++|++|.+.+.|.+..  .+|.++|||++|+|+++|+++..
T Consensus         7 ~~~a~~~~~~~~~---~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~   81 (373)
T cd08299           7 KCKAAVLWEPKKP---FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVT--PFPVILGHEAAGIVESVGEGVTT   81 (373)
T ss_pred             eeEEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCC--CCCccccccceEEEEEeCCCCcc
Confidence            4788888887664   788999999999999999999999999999998886532  45789999999999999999999


Q ss_pred             CCCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEEcCC
Q 023007          127 LAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSK  159 (288)
Q Consensus       127 ~~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~ip~  159 (288)
                      +++||+|++.+.                                               ..|+|+||++++.+.++++|+
T Consensus        82 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~  161 (373)
T cd08299          82 VKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA  161 (373)
T ss_pred             CCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence            999999997620                                               147899999999999999999


Q ss_pred             CCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCC
Q 023007          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGA  238 (288)
Q Consensus       160 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~  238 (288)
                      ++++.+++.+++++.+||+++...+++++|++|+|+|+ |++|++++++++.+|+ +|+++.    .++++++.++++|+
T Consensus       162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~----~~~~~~~~a~~lGa  236 (373)
T cd08299         162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVD----INKDKFAKAKELGA  236 (373)
T ss_pred             CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHcCC
Confidence            99999999999999999999888889999999999976 9999999999999999 788887    57889999999999


Q ss_pred             CEEEeCCcc---cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhc-cCCCeeC
Q 023007          239 DEVFTESQL---EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFL-RFREEQW  288 (288)
Q Consensus       239 ~~v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l-~~~G~~v  288 (288)
                      +++++..+.   ..+.+.+++++  ++|+++||+|++. ...++..+ +++|+|+
T Consensus       237 ~~~i~~~~~~~~~~~~v~~~~~~--~~d~vld~~g~~~~~~~~~~~~~~~~G~~v  289 (373)
T cd08299         237 TECINPQDYKKPIQEVLTEMTDG--GVDFSFEVIGRLDTMKAALASCHEGYGVSV  289 (373)
T ss_pred             ceEecccccchhHHHHHHHHhCC--CCeEEEECCCCcHHHHHHHHhhccCCCEEE
Confidence            999987643   23556666664  4999999999754 46666654 6788874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=1.3e-32  Score=252.46  Aligned_cols=232  Identities=16%  Similarity=0.121  Sum_probs=186.9

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHH-hCCCC-C----CCCCCcccccceEEEEEEe
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVYP-V----RPKVPAVGGYEGVGEVYSV  120 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~-~g~~~-~----~~~~p~~~G~e~~G~V~~~  120 (288)
                      +||++++.+++.    +++++.|.|++.++||+|||.++++|++|.+.+ .|... .    ...+|.++|||++|+|+++
T Consensus         2 ~~~a~~~~~~~~----l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v   77 (410)
T cd08238           2 KTKAWRMYGKGD----LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV   77 (410)
T ss_pred             CcEEEEEEcCCc----eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence            578999988774    899999999999999999999999999999976 34321 1    0135789999999999999


Q ss_pred             cCCCC-CCCCCCEEEecCC---------------CCcccceEEEeeCC----cEEEcCCCCChhhhcccccchH---HHH
Q 023007          121 GSAVT-RLAPGDWVIPSPP---------------SSGTWQSYVVKDQS----VWHKVSKDSPMEYAATIIVNPL---TAL  177 (288)
Q Consensus       121 G~~~~-~~~~Gd~V~~~~~---------------~~G~~a~~~~~~~~----~l~~ip~~~~~~~aa~l~~~~~---ta~  177 (288)
                      |++++ +|++||+|++.+.               .+|+|+||++++.+    .++++|+++++.+++.+. ++.   +++
T Consensus        78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~  156 (410)
T cd08238          78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIGAY  156 (410)
T ss_pred             CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHHHh
Confidence            99998 6999999988532               15899999999986    689999999999988653 221   233


Q ss_pred             HHH--------HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC---eEEEEEcCCCCCHHHHHHHHhC--------CC
Q 023007          178 RML--------EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI---HSINIIRDRAGSDEAKEKLKGL--------GA  238 (288)
Q Consensus       178 ~~l--------~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~---~vi~~~~~~~~~~~~~~~~~~~--------g~  238 (288)
                      .++        .+.+++++|++|+|+|++|++|++++|+|+.+|+   +|+++.    .++++++.++++        |+
T Consensus       157 ~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~----~~~~r~~~a~~~~~~~~~~~Ga  232 (410)
T cd08238         157 TANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTD----VNDERLARAQRLFPPEAASRGI  232 (410)
T ss_pred             hhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEc----CCHHHHHHHHHhccccccccCc
Confidence            332        2457889999999999889999999999999864   677776    588999999887        66


Q ss_pred             C-EEEeCCc--ccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          239 D-EVFTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       239 ~-~v~~~~~--~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      + .+++++.  ...+.+.+++++.+ +|++|||+|+... +.++++++++|+++
T Consensus       233 ~~~~i~~~~~~~~~~~v~~~t~g~g-~D~vid~~g~~~~~~~a~~~l~~~G~~v  285 (410)
T cd08238         233 ELLYVNPATIDDLHATLMELTGGQG-FDDVFVFVPVPELVEEADTLLAPDGCLN  285 (410)
T ss_pred             eEEEECCCccccHHHHHHHHhCCCC-CCEEEEcCCCHHHHHHHHHHhccCCeEE
Confidence            6 5677653  34466778888766 9999999986554 99999999998763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=3e-32  Score=241.99  Aligned_cols=232  Identities=23%  Similarity=0.268  Sum_probs=197.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++++++++ +.+++++.|.|.+.+++|+|++.++++|++|...+.|..+.....|..+|||++|+|+++  +++.|
T Consensus         1 ~~a~~~~~~~~~-~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~   77 (325)
T cd05280           1 FKALVVEEQDGG-VSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRF   77 (325)
T ss_pred             CceEEEcccCCC-CcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCC
Confidence            689999988764 348999999999999999999999999999999988876544455788999999999998  45689


Q ss_pred             CCCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCC--C-CCCeEEEeCCCC
Q 023007          128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL--N-SGDSIVQNGATS  199 (288)
Q Consensus       128 ~~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~--~-~g~~vlI~g~~g  199 (288)
                      ++||+|++...     ..|+|++|++++.+.++++|+++++.+++.+++.+.++|+++..+...  . .+++|+|+|++|
T Consensus        78 ~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g  157 (325)
T cd05280          78 REGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATG  157 (325)
T ss_pred             CCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCcc
Confidence            99999998631     258999999999999999999999999999999999999998765433  5 457999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHh
Q 023007          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (288)
Q Consensus       200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~  279 (288)
                      .+|++++++|+.+|+++++++    .++++.++++++|++++++++... ..+.....+.+ +|++|||+|+.....+++
T Consensus       158 ~vg~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~  231 (325)
T cd05280         158 GVGSIAVAILAKLGYTVVALT----GKEEQADYLKSLGASEVLDREDLL-DESKKPLLKAR-WAGAIDTVGGDVLANLLK  231 (325)
T ss_pred             HHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEEcchhHH-HHHHHHhcCCC-ccEEEECCchHHHHHHHH
Confidence            999999999999999998888    578899999999999998876542 23333344444 999999999987799999


Q ss_pred             hccCCCeeC
Q 023007          280 FLRFREEQW  288 (288)
Q Consensus       280 ~l~~~G~~v  288 (288)
                      +++++|+||
T Consensus       232 ~l~~~g~~v  240 (325)
T cd05280         232 QTKYGGVVA  240 (325)
T ss_pred             hhcCCCEEE
Confidence            999999985

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=5.7e-32  Score=240.14  Aligned_cols=234  Identities=24%  Similarity=0.318  Sum_probs=201.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      ||++++++++.+ ..+++.+.+.|.+.+++|+|++.++++|+.|.....|..+.  ....|.++|||++|+|+++|+++.
T Consensus         1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~   79 (324)
T cd08244           1 MRAIRLHEFGPP-EVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD   79 (324)
T ss_pred             CeEEEEcCCCCc-cceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence            688999876654 23777777777789999999999999999999988775432  234567899999999999999999


Q ss_pred             CCCCCCEEEecCC-CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHH
Q 023007          126 RLAPGDWVIPSPP-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC  204 (288)
Q Consensus       126 ~~~~Gd~V~~~~~-~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~  204 (288)
                      ++++||+|++... ..|+|++|+.++..+++++|+++++.+++.+++.++||| ++....+++++++|+|+|++|.+|++
T Consensus        80 ~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~  158 (324)
T cd08244          80 PAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSL  158 (324)
T ss_pred             CCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHH
Confidence            9999999998741 147999999999999999999999999999999999995 55566889999999999999999999


Q ss_pred             HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccC
Q 023007          205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF  283 (288)
Q Consensus       205 a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~  283 (288)
                      ++++|+.+|++++.++    .++++.+.++++|.+++++++... .+.+.+++++.+ +|+++||+|+.....+++++++
T Consensus       159 ~~~la~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~l~~  233 (324)
T cd08244         159 LVQLAKAAGATVVGAA----GGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGG-VTVVLDGVGGAIGRAALALLAP  233 (324)
T ss_pred             HHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCC-ceEEEECCChHhHHHHHHHhcc
Confidence            9999999999999988    578888888999999988877543 466777777665 9999999999888999999999


Q ss_pred             CCeeC
Q 023007          284 REEQW  288 (288)
Q Consensus       284 ~G~~v  288 (288)
                      +|+++
T Consensus       234 ~g~~v  238 (324)
T cd08244         234 GGRFL  238 (324)
T ss_pred             CcEEE
Confidence            99985

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=2.4e-32  Score=245.04  Aligned_cols=229  Identities=27%  Similarity=0.287  Sum_probs=198.2

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||++.+.+++.    +.+.+.|.|.+ .+++|+||+.++++|+.|+..+.|.++. .+.|.++|+|++|+|+++|+++++
T Consensus         1 ~ka~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~   75 (347)
T cd05278           1 MKALVYLGPGK----IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKR   75 (347)
T ss_pred             CceEEEecCCc----eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCccc
Confidence            58899988765    78889998888 8999999999999999999988887654 356889999999999999999999


Q ss_pred             CCCCCEEEecC-----------------------------CCCcccceEEEeeCC--cEEEcCCCCChhhhcccccchHH
Q 023007          127 LAPGDWVIPSP-----------------------------PSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLT  175 (288)
Q Consensus       127 ~~~Gd~V~~~~-----------------------------~~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~t  175 (288)
                      |++||+|++.+                             ...|+|++|++++.+  +++++|+++++.+++.++.+++|
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~t  155 (347)
T cd05278          76 LKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPT  155 (347)
T ss_pred             cCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhh
Confidence            99999999732                             125899999999987  89999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHH
Q 023007          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVK  253 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~  253 (288)
                      ||+++ ...++++|++|+|.|+ |.+|++++|+|+.+|+ +++++.    .++++.+.++++|++++++++.. ..+.+.
T Consensus       156 a~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~  229 (347)
T cd05278         156 GFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVD----SNPERLDLAKEAGATDIINPKNGDIVEQIL  229 (347)
T ss_pred             eeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHHHHhCCcEEEcCCcchHHHHHH
Confidence            99998 5688999999999875 9999999999999997 677775    46788888899999999988764 345677


Q ss_pred             HHhcCCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVGG-NSASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v  288 (288)
                      .++++.+ +|++|||+|+ ...+.++++|+++|+++
T Consensus       230 ~~~~~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v  264 (347)
T cd05278         230 ELTGGRG-VDCVIEAVGFEETFEQAVKVVRPGGTIA  264 (347)
T ss_pred             HHcCCCC-CcEEEEccCCHHHHHHHHHHhhcCCEEE
Confidence            7776655 9999999998 45699999999999975

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=3.5e-32  Score=241.37  Aligned_cols=221  Identities=42%  Similarity=0.607  Sum_probs=198.3

Q ss_pred             ceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCCc
Q 023007           62 VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSG  141 (288)
Q Consensus        62 ~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G  141 (288)
                      .+++++.+.|.+.+++|+||+.++++|+.|...+.+........|.++|+|++|+|+.+|++++++++||+|++.+. .|
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~g   91 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG-EG   91 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC-CC
Confidence            48888888888999999999999999999999887765443456789999999999999999999999999999762 37


Q ss_pred             ccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       142 ~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +|++|+.++.+.++++|+++++.+++.+++.+.+||+++...+.+.+|++|+|+|++|.+|++++++|+.+|+++++++ 
T Consensus        92 ~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~-  170 (323)
T cd05282          92 TWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVV-  170 (323)
T ss_pred             cceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEe-
Confidence            9999999999999999999999999999999999999998888899999999999999999999999999999999988 


Q ss_pred             CCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          222 DRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       222 ~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                         .++++.+.++++|++++++++.. ..+.+.+++++.+ +|++|||+|+.....++++++++|+|+
T Consensus       171 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g~~~~~~~~~~l~~~g~~v  234 (323)
T cd05282         171 ---RRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAG-ARLALDAVGGESATRLARSLRPGGTLV  234 (323)
T ss_pred             ---cChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCC-ceEEEECCCCHHHHHHHHhhCCCCEEE
Confidence               56788888899999999988763 4466777887766 999999999988888899999999985

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=4.6e-32  Score=245.05  Aligned_cols=230  Identities=28%  Similarity=0.355  Sum_probs=201.4

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++++   +++++.+.|.+.+++|+|++.++++|+.|...+.|.++.  .+|.++|+|++|+|+++|+++++|
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~   75 (363)
T cd08279           1 MRAAVLHEVGKP---LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGV   75 (363)
T ss_pred             CeEEEEecCCCC---ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCcccc
Confidence            689999988754   788999999999999999999999999999988876653  457789999999999999999999


Q ss_pred             CCCCEEEecC----------------------------------------------CCCcccceEEEeeCCcEEEcCCCC
Q 023007          128 APGDWVIPSP----------------------------------------------PSSGTWQSYVVKDQSVWHKVSKDS  161 (288)
Q Consensus       128 ~~Gd~V~~~~----------------------------------------------~~~G~~a~~~~~~~~~l~~ip~~~  161 (288)
                      ++||+|++.+                                              ...|+|++|+.++.+.++++|+++
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~  155 (363)
T cd08279          76 KPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDI  155 (363)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCC
Confidence            9999999842                                              125899999999999999999999


Q ss_pred             ChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       162 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      ++.+++.+++.+.+||+++.....+.+|++|+|+|+ |++|++++++|+.+|++ ++.+.    .++++.+.++++|+++
T Consensus       156 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~----~~~~~~~~~~~~g~~~  230 (363)
T cd08279         156 PLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVD----PVPEKLELARRFGATH  230 (363)
T ss_pred             ChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc----CCHHHHHHHHHhCCeE
Confidence            999999999999999999988899999999999965 99999999999999997 77776    5788888889999999


Q ss_pred             EEeCCcc-cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          241 VFTESQL-EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       241 v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +++++.. ....+..++.+.+ +|+++||+++.. ...++++++++|+++
T Consensus       231 vv~~~~~~~~~~l~~~~~~~~-vd~vld~~~~~~~~~~~~~~l~~~G~~v  279 (363)
T cd08279         231 TVNASEDDAVEAVRDLTDGRG-ADYAFEAVGRAATIRQALAMTRKGGTAV  279 (363)
T ss_pred             EeCCCCccHHHHHHHHcCCCC-CCEEEEcCCChHHHHHHHHHhhcCCeEE
Confidence            9988764 3456777776655 999999999654 489999999999985

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=6.9e-32  Score=240.38  Aligned_cols=232  Identities=28%  Similarity=0.345  Sum_probs=200.9

Q ss_pred             cceEEEEccCCC-CCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           47 PSKAVVYEREGP-PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        47 ~~~a~~~~~~g~-~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      .||+|++.+++. +.+.+++++.+.|.+.++|++||+.++++|+.|+....|.+.....+|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            379999999776 2345889999999999999999999999999999988876554345678999999999999999999


Q ss_pred             CCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHH
Q 023007          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (288)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a  205 (288)
                      ++++||+|+++.  .|+|++|+.++.+.++++|++  +.+++.++.++.+||+++....++++|++|+|+|++|.+|+++
T Consensus        81 ~~~~Gd~V~~~~--~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~  156 (329)
T cd08250          81 DFKVGDAVATMS--FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFA  156 (329)
T ss_pred             CCCCCCEEEEec--CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHH
Confidence            999999999875  479999999999999999997  3567788889999999998888999999999999999999999


Q ss_pred             HHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCC
Q 023007          206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR  284 (288)
Q Consensus       206 ~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~  284 (288)
                      +++++..|++++.++    .++++.+.++++|.+.+++.+.... +.+..+.+ .+ +|++|||.|+.....++++++++
T Consensus       157 ~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~-vd~v~~~~g~~~~~~~~~~l~~~  230 (329)
T cd08250         157 VQLAKLAGCHVIGTC----SSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KG-VDVVYESVGGEMFDTCVDNLALK  230 (329)
T ss_pred             HHHHHHcCCeEEEEe----CcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CC-CeEEEECCcHHHHHHHHHHhccC
Confidence            999999999999988    5778888889999988888765433 44544443 34 99999999987779999999999


Q ss_pred             CeeC
Q 023007          285 EEQW  288 (288)
Q Consensus       285 G~~v  288 (288)
                      |+|+
T Consensus       231 g~~v  234 (329)
T cd08250         231 GRLI  234 (329)
T ss_pred             CeEE
Confidence            9975

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.2e-32  Score=245.66  Aligned_cols=230  Identities=25%  Similarity=0.319  Sum_probs=201.5

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC-
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR-  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~-  126 (288)
                      ||+|++..++.+   +++++.|.|.+.++||+|++.++++|+.|+..+.+.++.  .+|.++|||++|+|+.+|+++.+ 
T Consensus         1 ~~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~   75 (367)
T cd08263           1 MKAAVLKGPNPP---LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENP   75 (367)
T ss_pred             CeeEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCC
Confidence            689999988643   778888988899999999999999999999988876654  45789999999999999999988 


Q ss_pred             --CCCCCEEEecC------------------------------------------------CCCcccceEEEeeCCcEEE
Q 023007          127 --LAPGDWVIPSP------------------------------------------------PSSGTWQSYVVKDQSVWHK  156 (288)
Q Consensus       127 --~~~Gd~V~~~~------------------------------------------------~~~G~~a~~~~~~~~~l~~  156 (288)
                        |++||+|++.+                                                ...|++++|+.++.+.+++
T Consensus        76 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  155 (367)
T cd08263          76 YGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAP  155 (367)
T ss_pred             CcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEE
Confidence              99999999831                                                1258999999999999999


Q ss_pred             cCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHh
Q 023007          157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKG  235 (288)
Q Consensus       157 ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~  235 (288)
                      +|+++++.+++.++.+++|||+++.....+.++++|+|+| +|++|++++++|+.+|++ ++++.    .++++.+.+++
T Consensus       156 ~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~----~s~~~~~~~~~  230 (367)
T cd08263         156 LPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVD----VRDEKLAKAKE  230 (367)
T ss_pred             CCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHH
Confidence            9999999999999999999999998888889999999996 599999999999999998 77776    57888888899


Q ss_pred             CCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          236 LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       236 ~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      +|.+.+++++... .+.+..++++.+ +|++|||+|+. ....++++++++|+|+
T Consensus       231 ~g~~~v~~~~~~~~~~~l~~~~~~~~-~d~vld~vg~~~~~~~~~~~l~~~G~~v  284 (367)
T cd08263         231 LGATHTVNAAKEDAVAAIREITGGRG-VDVVVEALGKPETFKLALDVVRDGGRAV  284 (367)
T ss_pred             hCCceEecCCcccHHHHHHHHhCCCC-CCEEEEeCCCHHHHHHHHHHHhcCCEEE
Confidence            9999999987543 456777776665 99999999997 6688999999999985

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=5.2e-32  Score=243.47  Aligned_cols=231  Identities=25%  Similarity=0.283  Sum_probs=199.3

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC-----------CCCCCcccccceEEE
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-----------RPKVPAVGGYEGVGE  116 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~~~G~e~~G~  116 (288)
                      ||++++..++.+   +++++.|.|++.++||+|++.++++|+.|+..+.|.++.           ....|.++|+|++|+
T Consensus         1 ~~a~~~~~~~~~---~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~   77 (350)
T cd08240           1 MKAAAVVEPGKP---LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE   77 (350)
T ss_pred             CeeEEeccCCCC---ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence            688988877754   788899999999999999999999999999988875432           223467899999999


Q ss_pred             EEEecCCCCCCCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccc
Q 023007          117 VYSVGSAVTRLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATII  170 (288)
Q Consensus       117 V~~~G~~~~~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~  170 (288)
                      |+++|++++++++||+|++++.                          ..|++++|+.++.+.++++|+++++.+++.+.
T Consensus        78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~  157 (350)
T cd08240          78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA  157 (350)
T ss_pred             EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence            9999999999999999998731                          25899999999999999999999999999999


Q ss_pred             cchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-
Q 023007          171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-  248 (288)
Q Consensus       171 ~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-  248 (288)
                      +.+++||+++.....++++++|+|+|+ |++|++++|+|+.+|+ +++++.    .++++.+.++++|++.+++++... 
T Consensus       158 ~~~~tA~~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~  232 (350)
T cd08240         158 CSGLTAYSAVKKLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVD----IDEAKLEAAKAAGADVVVNGSDPDA  232 (350)
T ss_pred             chhhhHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHhCCcEEecCCCccH
Confidence            999999999988777788999999975 9999999999999999 566766    578888999999999888876543 


Q ss_pred             HHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          249 VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       249 ~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      .+.+.++.++ + +|++|||+|.. ....++++|+++|+|+
T Consensus       233 ~~~~~~~~~~-~-~d~vid~~g~~~~~~~~~~~l~~~g~~v  271 (350)
T cd08240         233 AKRIIKAAGG-G-VDAVIDFVNNSATASLAFDILAKGGKLV  271 (350)
T ss_pred             HHHHHHHhCC-C-CcEEEECCCCHHHHHHHHHHhhcCCeEE
Confidence            4567777666 4 99999999864 4599999999999985

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=6.4e-32  Score=240.02  Aligned_cols=230  Identities=26%  Similarity=0.295  Sum_probs=196.3

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~  128 (288)
                      |++++...+.+ +++++++.|.|.+.+++|+||+.++++|+.|...+.|..+.....|..+|||++|+|+.  .++.+|+
T Consensus         1 ~a~~~~~~~~~-~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   77 (323)
T TIGR02823         1 KALVVEKEDGK-VSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFR   77 (323)
T ss_pred             CeEEEccCCCC-cceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCC
Confidence            57888887765 46899999999999999999999999999999988886543335578899999999988  5667899


Q ss_pred             CCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhc--CCCCCC-eEEEeCCCCh
Q 023007          129 PGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT--TLNSGD-SIVQNGATSI  200 (288)
Q Consensus       129 ~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~--~~~~g~-~vlI~g~~g~  200 (288)
                      +||+|+++..     ..|++++|+.++.+.++++|+++++.+++.++..+.+||+++....  .+.+|+ +|+|+|++|.
T Consensus        78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~  157 (323)
T TIGR02823        78 EGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGG  157 (323)
T ss_pred             CCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcH
Confidence            9999998751     2589999999999999999999999999999999999998876543  388898 9999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhh
Q 023007          201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF  280 (288)
Q Consensus       201 vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~  280 (288)
                      +|++++++|+.+|+++++++    .++++.+.++++|++++++.++... .+..++++  ++|+++||+|++..+.++++
T Consensus       158 vg~~~~~la~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~--~~d~vld~~g~~~~~~~~~~  230 (323)
T TIGR02823       158 VGSLAVAILSKLGYEVVAST----GKAEEEDYLKELGASEVIDREDLSP-PGKPLEKE--RWAGAVDTVGGHTLANVLAQ  230 (323)
T ss_pred             HHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHhcCCcEEEccccHHH-HHHHhcCC--CceEEEECccHHHHHHHHHH
Confidence            99999999999999999888    4677778899999999888765332 34445444  49999999998877999999


Q ss_pred             ccCCCeeC
Q 023007          281 LRFREEQW  288 (288)
Q Consensus       281 l~~~G~~v  288 (288)
                      ++++|+|+
T Consensus       231 l~~~G~~v  238 (323)
T TIGR02823       231 LKYGGAVA  238 (323)
T ss_pred             hCCCCEEE
Confidence            99999985

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=5.4e-32  Score=246.49  Aligned_cols=229  Identities=23%  Similarity=0.246  Sum_probs=196.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||++++.+++.    +++++++.|.+ .+++|+||+.++++|++|...+.|.++. .++|.++|||++|+|+++|+++++
T Consensus         1 m~a~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~   75 (386)
T cd08283           1 MKALVWHGKGD----VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMGVVEEVGPEVRN   75 (386)
T ss_pred             CeeEEEecCCC----ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceEEEEEeCCCCCC
Confidence            68899986643    88999999887 4999999999999999999999887654 356889999999999999999999


Q ss_pred             CCCCCEEEecCC----------------------------------------------CCcccceEEEeeCC--cEEEcC
Q 023007          127 LAPGDWVIPSPP----------------------------------------------SSGTWQSYVVKDQS--VWHKVS  158 (288)
Q Consensus       127 ~~~Gd~V~~~~~----------------------------------------------~~G~~a~~~~~~~~--~l~~ip  158 (288)
                      +++||+|++.+.                                              ..|++++|++++.+  .++++|
T Consensus        76 ~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp  155 (386)
T cd08283          76 LKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIP  155 (386)
T ss_pred             CCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECC
Confidence            999999988531                                              14889999999987  899999


Q ss_pred             CCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCC
Q 023007          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG  237 (288)
Q Consensus       159 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g  237 (288)
                      +++++.+++.++..+++||+++ ..+.+.+|++|+|+|+ |.+|++++++|+.+|+. ++++.    .++++.+.+++++
T Consensus       156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~----~~~~~~~~~~~~~  229 (386)
T cd08283         156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAID----RVPERLEMARSHL  229 (386)
T ss_pred             CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcC
Confidence            9999999999999999999999 6789999999999976 99999999999999984 77776    5789999999885


Q ss_pred             CCEEEeCCcc--cHHHHHHHhcCCCCccEEEECCCcc----------------------cHHHHHhhccCCCeeC
Q 023007          238 ADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGN----------------------SASKVLKFLRFREEQW  288 (288)
Q Consensus       238 ~~~v~~~~~~--~~~~i~~~~~~~g~~D~v~d~~g~~----------------------~~~~a~~~l~~~G~~v  288 (288)
                      ...++++...  ..+.+..++++.+ +|++|||+|++                      ..+.++++++++|+++
T Consensus       230 ~~~vi~~~~~~~~~~~l~~~~~~~~-~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv  303 (386)
T cd08283         230 GAETINFEEVDDVVEALRELTGGRG-PDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVS  303 (386)
T ss_pred             CcEEEcCCcchHHHHHHHHHcCCCC-CCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEE
Confidence            4467776654  4566777777765 99999999864                      3488899999999985

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=7.2e-32  Score=238.69  Aligned_cols=230  Identities=27%  Similarity=0.310  Sum_probs=198.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++.+.+.+... .+++.+.+.|.+.++||+||+.++++|+.|+....+..+. ...|.++|||++|+|+++|.  .++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~--~~~   76 (320)
T cd08243           1 MKAIVIEQPGGPE-VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVEEAPG--GTF   76 (320)
T ss_pred             CeEEEEcCCCCcc-ceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEEEecC--CCC
Confidence            5788888776542 3777888887889999999999999999999988776533 24578899999999999995  579


Q ss_pred             CCCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHH
Q 023007          128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG  202 (288)
Q Consensus       128 ~~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG  202 (288)
                      ++||+|+++..     ..|+|++|+.++...++++|+++++.+++.++.++.+||+++.....+++|++|+|+|++|.+|
T Consensus        77 ~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g  156 (320)
T cd08243          77 TPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVG  156 (320)
T ss_pred             CCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHH
Confidence            99999998753     2489999999999999999999999999999999999999999888899999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007          203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR  282 (288)
Q Consensus       203 ~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~  282 (288)
                      ++++++|+.+|++++.++    .++++.+.++++|++++++......+.+.++  +.+ +|+++||+|+.....++++++
T Consensus       157 ~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~--~~~-~d~vl~~~~~~~~~~~~~~l~  229 (320)
T cd08243         157 LAALKLAKALGATVTATT----RSPERAALLKELGADEVVIDDGAIAEQLRAA--PGG-FDKVLELVGTATLKDSLRHLR  229 (320)
T ss_pred             HHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEEecCccHHHHHHHh--CCC-ceEEEECCChHHHHHHHHHhc
Confidence            999999999999999988    5788889999999998876544444566666  444 999999999977799999999


Q ss_pred             CCCeeC
Q 023007          283 FREEQW  288 (288)
Q Consensus       283 ~~G~~v  288 (288)
                      ++|+|+
T Consensus       230 ~~g~~v  235 (320)
T cd08243         230 PGGIVC  235 (320)
T ss_pred             cCCEEE
Confidence            999985

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=5.9e-32  Score=244.57  Aligned_cols=230  Identities=26%  Similarity=0.342  Sum_probs=197.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      +|++++.+.+..   +++++.+.|.+.+++|+|++.++++|+.|++.+.+....  ..|.++|||++|+|+++|++++++
T Consensus         1 ~~a~~~~~~~~~---~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~   75 (365)
T cd05279           1 CKAAVLWEKGKP---LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTL   75 (365)
T ss_pred             CceeEEecCCCC---cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccC
Confidence            367778776654   788999999999999999999999999999988876543  457899999999999999999999


Q ss_pred             CCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEEcCCC
Q 023007          128 APGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHKVSKD  160 (288)
Q Consensus       128 ~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~ip~~  160 (288)
                      ++||+|++.+.                                               ..|+|++|+.++.+.++++|++
T Consensus        76 ~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  155 (365)
T cd05279          76 KPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPD  155 (365)
T ss_pred             CCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCC
Confidence            99999998632                                               1368999999999999999999


Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      +++.+++.+..++.+||+++...+++++|++|+|+|+ |++|++++++|+.+|+++++++.   .++++.+.++++|+++
T Consensus       156 ~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~  231 (365)
T cd05279         156 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVD---INKDKFEKAKQLGATE  231 (365)
T ss_pred             CCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe---CCHHHHHHHHHhCCCe
Confidence            9999999999999999999888899999999999975 99999999999999997544442   4788899999999999


Q ss_pred             EEeCCcc---cHHHHHHHhcCCCCccEEEECCCc-ccHHHHHhhcc-CCCeeC
Q 023007          241 VFTESQL---EVKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLR-FREEQW  288 (288)
Q Consensus       241 v~~~~~~---~~~~i~~~~~~~g~~D~v~d~~g~-~~~~~a~~~l~-~~G~~v  288 (288)
                      +++++..   ..+.+.++++ .+ +|++|||+|. .....++++++ ++|+++
T Consensus       232 ~v~~~~~~~~~~~~l~~~~~-~~-~d~vid~~g~~~~~~~~~~~l~~~~G~~v  282 (365)
T cd05279         232 CINPRDQDKPIVEVLTEMTD-GG-VDYAFEVIGSADTLKQALDATRLGGGTSV  282 (365)
T ss_pred             ecccccccchHHHHHHHHhC-CC-CcEEEECCCCHHHHHHHHHHhccCCCEEE
Confidence            9987654   2355677774 34 9999999986 44589999999 999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-31  Score=241.50  Aligned_cols=230  Identities=25%  Similarity=0.297  Sum_probs=194.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--------CCCCCcccccceEEEEEE
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--------RPKVPAVGGYEGVGEVYS  119 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--------~~~~p~~~G~e~~G~V~~  119 (288)
                      ||+++++++++    +++++.+.|++.+++|+||+.++++|+.|...+.|....        ..+.|.++|||++|+|++
T Consensus         1 mka~~~~~~~~----~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~   76 (350)
T cd08256           1 MRAVVCHGPQD----YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE   76 (350)
T ss_pred             CeeEEEecCCc----eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence            68999987764    889999999999999999999999999999888775311        013567899999999999


Q ss_pred             ecCCCC--CCCCCCEEEecC----------------------------CCCcccceEEEeeCC-cEEEcCCCCChhhhcc
Q 023007          120 VGSAVT--RLAPGDWVIPSP----------------------------PSSGTWQSYVVKDQS-VWHKVSKDSPMEYAAT  168 (288)
Q Consensus       120 ~G~~~~--~~~~Gd~V~~~~----------------------------~~~G~~a~~~~~~~~-~l~~ip~~~~~~~aa~  168 (288)
                      +|++++  +|++||+|++.+                            ...|+|++|+.++.+ .++++|+++++.+++.
T Consensus        77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~  156 (350)
T cd08256          77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL  156 (350)
T ss_pred             eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence            999998  899999999721                            125899999999987 5789999999999998


Q ss_pred             cccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-
Q 023007          169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-  247 (288)
Q Consensus       169 l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-  247 (288)
                      + .++.++|+++ ...++++|++|+|.|+ |++|++++++|+.+|++++.+++   .++++.+.++++|++++++++.. 
T Consensus       157 ~-~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~v~~~~~~~  230 (350)
T cd08256         157 I-EPLACALHAV-DRANIKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLD---LKDERLALARKFGADVVLNPPEVD  230 (350)
T ss_pred             h-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc---CCHHHHHHHHHcCCcEEecCCCcC
Confidence            8 7899999998 6689999999999555 99999999999999997665553   47888888899999999887654 


Q ss_pred             cHHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          248 EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      ..+.+.+++++.+ +|++|||+|+. ....++++++++|+++
T Consensus       231 ~~~~~~~~~~~~~-vdvvld~~g~~~~~~~~~~~l~~~G~~v  271 (350)
T cd08256         231 VVEKIKELTGGYG-CDIYIEATGHPSAVEQGLNMIRKLGRFV  271 (350)
T ss_pred             HHHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence            4567778887766 99999999964 4588999999999985

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.2e-31  Score=240.35  Aligned_cols=228  Identities=24%  Similarity=0.292  Sum_probs=196.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++++++.    +.+++.+.|++.+++|+|++.++++|+.|+..+.+.+. .+..|.++|+|++|+|+++|+++++|
T Consensus         1 ~~~~~~~~~~~----~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~   75 (343)
T cd08235           1 MKAAVLHGPND----VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGF   75 (343)
T ss_pred             CeEEEEecCCc----eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCC
Confidence            58899988764    88999999889999999999999999999998887653 22446789999999999999999999


Q ss_pred             CCCCEEEecCC--------------------------CCcccceEEEeeCCc-----EEEcCCCCChhhhcccccchHHH
Q 023007          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSV-----WHKVSKDSPMEYAATIIVNPLTA  176 (288)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~-----l~~ip~~~~~~~aa~l~~~~~ta  176 (288)
                      ++||+|++++.                          ..|+|++|+.++...     ++++|+++++.+++.+ .++.+|
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a  154 (343)
T cd08235          76 KVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACC  154 (343)
T ss_pred             CCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHH
Confidence            99999998632                          258999999999988     9999999999998876 688999


Q ss_pred             HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHH
Q 023007          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKG  254 (288)
Q Consensus       177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~  254 (288)
                      |+++.. .++++|++|+|+|+ |++|++++++|+..|++ +++++    .++++.+.++++|.++++++++.. .+.+.+
T Consensus       155 ~~~l~~-~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~----~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~  228 (343)
T cd08235         155 INAQRK-AGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSD----LNEFRLEFAKKLGADYTIDAAEEDLVEKVRE  228 (343)
T ss_pred             HHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCcEEecCCccCHHHHHHH
Confidence            999966 48999999999975 99999999999999999 77776    578888888899999999887654 456777


Q ss_pred             HhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      ++++.+ +|++|||.++. ....++++++++|+|+
T Consensus       229 ~~~~~~-vd~vld~~~~~~~~~~~~~~l~~~g~~v  262 (343)
T cd08235         229 LTDGRG-ADVVIVATGSPEAQAQALELVRKGGRIL  262 (343)
T ss_pred             HhCCcC-CCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence            777765 99999999976 4588999999999985

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-31  Score=239.97  Aligned_cols=229  Identities=26%  Similarity=0.317  Sum_probs=201.4

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||+|++.+++.+   +++++.+.|.+.+++|+|++.++++|+.|+..+.|..+. ...|.++|+|++|+|+.+|+++++|
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~G~~~~~~   76 (345)
T cd08260           1 MRAAVYEEFGEP---LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEVGEDVSRW   76 (345)
T ss_pred             CeeEEEecCCCC---cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEECCCCccC
Confidence            799999988765   788899999999999999999999999999988886553 2557899999999999999999999


Q ss_pred             CCCCEEEe---------------------------cCCCCcccceEEEeeCC--cEEEcCCCCChhhhcccccchHHHHH
Q 023007          128 APGDWVIP---------------------------SPPSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTALR  178 (288)
Q Consensus       128 ~~Gd~V~~---------------------------~~~~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~ta~~  178 (288)
                      ++||+|++                           +. ..|+|++|+.++..  +++++|+++++.+++.++.++++||+
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  155 (345)
T cd08260          77 RVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFT-HPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFR  155 (345)
T ss_pred             CCCCEEEECCCCCCCCCccccCcCcccCCCCcccccC-CCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHH
Confidence            99999987                           21 15899999999974  89999999999999999999999999


Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-c-cHHHHHHHh
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLL  256 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~-~~~~i~~~~  256 (288)
                      ++....++.++++|+|+| +|++|++++++|+.+|+++++++    .++++.+.++++|++++++++. . ..+.+..++
T Consensus       156 ~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~  230 (345)
T cd08260         156 ALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVD----IDDDKLELARELGAVATVNASEVEDVAAAVRDLT  230 (345)
T ss_pred             HHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHhCCCEEEccccchhHHHHHHHHh
Confidence            998888899999999999 59999999999999999999998    5788889999999999999876 3 345677777


Q ss_pred             cCCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007          257 ANLPEPALGFNCVGG-NSASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v  288 (288)
                      .+ + +|++|||+|+ .....++++++++|+++
T Consensus       231 ~~-~-~d~vi~~~g~~~~~~~~~~~l~~~g~~i  261 (345)
T cd08260         231 GG-G-AHVSVDALGIPETCRNSVASLRKRGRHV  261 (345)
T ss_pred             CC-C-CCEEEEcCCCHHHHHHHHHHhhcCCEEE
Confidence            76 5 9999999996 44588999999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=7e-32  Score=242.35  Aligned_cols=233  Identities=28%  Similarity=0.302  Sum_probs=197.4

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCC--------C------CCCCCcccccc
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYP--------V------RPKVPAVGGYE  112 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~--------~------~~~~p~~~G~e  112 (288)
                      ||++++++.+++.+.+++++.+.|.+ .++||+|++.++++|++|...+.|...        .      ....|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            68899888887655688889999988 499999999999999999998877421        0      12457899999


Q ss_pred             eEEEEEEecCCCCCCCCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCC--
Q 023007          113 GVGEVYSVGSAVTRLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS--  188 (288)
Q Consensus       113 ~~G~V~~~G~~~~~~~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~--  188 (288)
                      ++|+|+.+|+++++|++||+|+++..  ..|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.+.+.+.+  
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~  160 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN  160 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence            99999999999999999999998752  25899999999999999999999999999999999999999988777754  


Q ss_pred             --CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          189 --GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       189 --g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                        |++|+|+|++|++|++++++++.+|++++++++    + ++.+.++++|.+++++.+....  ...++.+.+ +|++|
T Consensus       161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~----~-~~~~~~~~~g~~~~~~~~~~~~--~~~l~~~~~-vd~vi  232 (350)
T cd08248         161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCS----T-DAIPLVKSLGADDVIDYNNEDF--EEELTERGK-FDVIL  232 (350)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC----c-chHHHHHHhCCceEEECCChhH--HHHHHhcCC-CCEEE
Confidence              999999999999999999999999999988772    3 4677888999998888765332  222233334 99999


Q ss_pred             ECCCcccHHHHHhhccCCCeeC
Q 023007          267 NCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       267 d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      ||+|+.....++++++++|+++
T Consensus       233 ~~~g~~~~~~~~~~l~~~G~~v  254 (350)
T cd08248         233 DTVGGDTEKWALKLLKKGGTYV  254 (350)
T ss_pred             ECCChHHHHHHHHHhccCCEEE
Confidence            9999987799999999999985

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-31  Score=238.92  Aligned_cols=227  Identities=23%  Similarity=0.340  Sum_probs=196.5

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||+++++.++.    +++.+.+.|.+.++|++|+|.++++|+.|+....+.++.. ..|.++|+|++|+|+.+|+++++|
T Consensus         1 ~~a~~~~~~~~----~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~   75 (337)
T cd08261           1 MKALVCEKPGR----LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGL   75 (337)
T ss_pred             CeEEEEeCCCc----eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCC
Confidence            68888887653    8899999999999999999999999999999888765543 447789999999999999999999


Q ss_pred             CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      ++||+|++...                          ..|+|++|+.++++ ++++|+++++.+++.+ ..++++++++ 
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-  152 (337)
T cd08261          76 KVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-  152 (337)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-
Confidence            99999997321                          25899999999999 9999999999998877 5778888887 


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLP  260 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g  260 (288)
                      ...++.+|++|||+|+ |.+|++++++|+.+|+++++++    .++++.++++++|++++++++... .+.+.+++++.+
T Consensus       153 ~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~----~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~  227 (337)
T cd08261         153 RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVD----IDDERLEFARELGADDTINVGDEDVAARLRELTDGEG  227 (337)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEC----CCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCC
Confidence            6789999999999975 8999999999999999999987    578888999999999999987653 466777777665


Q ss_pred             CccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          261 EPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       261 ~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                       +|++|||.|+.. ...++++|+++|+++
T Consensus       228 -vd~vld~~g~~~~~~~~~~~l~~~G~~i  255 (337)
T cd08261         228 -ADVVIDATGNPASMEEAVELVAHGGRVV  255 (337)
T ss_pred             -CCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence             999999998754 588999999999984

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.3e-31  Score=238.71  Aligned_cols=230  Identities=25%  Similarity=0.232  Sum_probs=198.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||++++.+++.    +++++.+.|++ .++||+|++.++++|+.|...+.|.++.. .+|.++|||++|+|+++|+++++
T Consensus         1 m~a~~~~~~~~----~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~   75 (345)
T cd08286           1 MKALVYHGPGK----ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTN   75 (345)
T ss_pred             CceEEEecCCc----eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCccc
Confidence            68899988764    88999999885 79999999999999999999998875542 44789999999999999999999


Q ss_pred             CCCCCEEEecCC---------------------------CCcccceEEEeeCC--cEEEcCCCCChhhhcccccchHHHH
Q 023007          127 LAPGDWVIPSPP---------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLTAL  177 (288)
Q Consensus       127 ~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~ta~  177 (288)
                      +++||+|++.+.                           ..|++++|+.++.+  .++++|++++..+++.++..+++||
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~  155 (345)
T cd08286          76 FKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGY  155 (345)
T ss_pred             cCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHH
Confidence            999999998541                           12889999999987  8999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHH
Q 023007          178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGL  255 (288)
Q Consensus       178 ~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~  255 (288)
                      +++....++.+|++|+|+|+ |.+|++++|+++.+| .+++++.    .++++.+.++++|++.+++++.. ..+.+.++
T Consensus       156 ~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~  230 (345)
T cd08286         156 ECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVD----LDDNRLEVAKKLGATHTVNSAKGDAIEQVLEL  230 (345)
T ss_pred             HHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCCceeccccccHHHHHHHH
Confidence            98777788999999999886 999999999999999 6777754    47788888899999999988754 34566777


Q ss_pred             hcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +++.+ +|++|||+|+... +.++++|+++|+|+
T Consensus       231 ~~~~~-~d~vld~~g~~~~~~~~~~~l~~~g~~v  263 (345)
T cd08286         231 TDGRG-VDVVIEAVGIPATFELCQELVAPGGHIA  263 (345)
T ss_pred             hCCCC-CCEEEECCCCHHHHHHHHHhccCCcEEE
Confidence            77655 9999999987544 88889999999985

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=4.9e-32  Score=240.61  Aligned_cols=231  Identities=30%  Similarity=0.409  Sum_probs=191.8

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCC---CCCcccccceEEE---EEEec
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---KVPAVGGYEGVGE---VYSVG  121 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~G~e~~G~---V~~~G  121 (288)
                      ++.+.+.....+.+....++.+.|.+.+++++|++.++++|+.|+.+..|.+....   .+|.+++.++.|+   +...|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g   84 (347)
T KOG1198|consen    5 IRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVG   84 (347)
T ss_pred             cceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccc
Confidence            34455555555555577778899999999999999999999999999999887766   6775555555554   44445


Q ss_pred             -CCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhc------CCCCCCeEEE
Q 023007          122 -SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT------TLNSGDSIVQ  194 (288)
Q Consensus       122 -~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~------~~~~g~~vlI  194 (288)
                       ..+..+..||.+..... .|+|+||.++|...++++|+++++.++|++|.++.|||.++....      +.++|++|||
T Consensus        85 ~~~~~~~~~g~~~~~~~~-~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv  163 (347)
T KOG1198|consen   85 DDVVGGWVHGDAVVAFLS-SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLV  163 (347)
T ss_pred             cccccceEeeeEEeeccC-CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEE
Confidence             33456778887777665 699999999999999999999999999999999999999999989      8999999999


Q ss_pred             eCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCCCCccEEEECCCcc
Q 023007          195 NGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGN  272 (288)
Q Consensus       195 ~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~g~~D~v~d~~g~~  272 (288)
                      +|++|++|++++|+|++.|+ ++++++     ++++.++++++|+++++||++.++ +.++..+ +.+ ||+||||+|+.
T Consensus       164 ~ggsggVG~~aiQlAk~~~~~~v~t~~-----s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~-~DvVlD~vg~~  236 (347)
T KOG1198|consen  164 LGGSGGVGTAAIQLAKHAGAIKVVTAC-----SKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKG-VDVVLDCVGGS  236 (347)
T ss_pred             EeCCcHHHHHHHHHHHhcCCcEEEEEc-----ccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCC-ccEEEECCCCC
Confidence            99999999999999999994 555554     889999999999999999998653 5666666 444 99999999998


Q ss_pred             cHHHHHhhccCCCe
Q 023007          273 SASKVLKFLRFREE  286 (288)
Q Consensus       273 ~~~~a~~~l~~~G~  286 (288)
                      ....+..++..+|+
T Consensus       237 ~~~~~~~~l~~~g~  250 (347)
T KOG1198|consen  237 TLTKSLSCLLKGGG  250 (347)
T ss_pred             ccccchhhhccCCc
Confidence            77778888777764

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=2.3e-31  Score=238.54  Aligned_cols=227  Identities=29%  Similarity=0.332  Sum_probs=197.0

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++++.+.    +.+++.+.|++.++||+||+.++++|+.|+..+.+.+..  ..|.++|+|++|+|+.+|+++.+|
T Consensus         1 ~~a~~~~~~~~----l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~--~~~~~~g~~~~G~V~~~g~~v~~~   74 (343)
T cd08236           1 MKALVLTGPGD----LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY--HPPLVLGHEFSGTVEEVGSGVDDL   74 (343)
T ss_pred             CeeEEEecCCc----eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC--CCCcccCcceEEEEEEECCCCCcC
Confidence            68999998754    788999999999999999999999999999888776522  346889999999999999999999


Q ss_pred             CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      ++||+|++++.                          ..|+|++|+.++.+.++++|+++++.+++.+ ..+++||+++.
T Consensus        75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~  153 (343)
T cd08236          75 AVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR  153 (343)
T ss_pred             CCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH
Confidence            99999998721                          3589999999999999999999999999887 57889999986


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g  260 (288)
                       ...++++++|+|+|+ |.+|++++++|+.+|++ +++++    .++++.++++++|.+.+++++....+.+..++++.+
T Consensus       154 -~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~  227 (343)
T cd08236         154 -LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVD----IDDEKLAVARELGADDTINPKEEDVEKVRELTEGRG  227 (343)
T ss_pred             -hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCC
Confidence             688999999999975 99999999999999998 88877    567888888999999999887544566777777765


Q ss_pred             CccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          261 EPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       261 ~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                       +|+++||.|+.. ...++++|+++|+++
T Consensus       228 -~d~vld~~g~~~~~~~~~~~l~~~G~~v  255 (343)
T cd08236         228 -ADLVIEAAGSPATIEQALALARPGGKVV  255 (343)
T ss_pred             -CCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence             999999998754 489999999999984

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=5.2e-32  Score=242.53  Aligned_cols=230  Identities=29%  Similarity=0.388  Sum_probs=198.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||+++++.++ + ..+++++.+.|++.++||+|++.++++|++|.....+.+  ....|.++|||++|+|+.+|+++++|
T Consensus         1 m~a~~~~~~~-~-~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~   76 (339)
T cd08249           1 QKAAVLTGPG-G-GLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVVEVGSGVTRF   76 (339)
T ss_pred             CceEEeccCC-C-CcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence            6899999886 2 238888999999999999999999999999988765543  11346789999999999999999999


Q ss_pred             CCCCEEEecCC-------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCC----------CCCC
Q 023007          128 APGDWVIPSPP-------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL----------NSGD  190 (288)
Q Consensus       128 ~~Gd~V~~~~~-------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~----------~~g~  190 (288)
                      ++||+|+++..       ..|++++|++++.+.++++|+++++.+++.+++++.+||+++.+..++          ++++
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~  156 (339)
T cd08249          77 KVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGK  156 (339)
T ss_pred             CCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCC
Confidence            99999999853       248999999999999999999999999999999999999998776554          7899


Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|+|+|++|.+|++++++++.+|++++.++     ++++.+.++++|++++++++... .+.+.+++++  ++|++||++
T Consensus       157 ~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-----~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~--~~d~vl~~~  229 (339)
T cd08249         157 PVLIWGGSSSVGTLAIQLAKLAGYKVITTA-----SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGG--KLRYALDCI  229 (339)
T ss_pred             EEEEEcChhHHHHHHHHHHHHcCCeEEEEE-----CcccHHHHHhcCCCEEEECCCchHHHHHHHhcCC--CeeEEEEee
Confidence            999999999999999999999999998877     34777888999999999987643 4567666653  499999999


Q ss_pred             Cc-ccHHHHHhhccC--CCeeC
Q 023007          270 GG-NSASKVLKFLRF--REEQW  288 (288)
Q Consensus       270 g~-~~~~~a~~~l~~--~G~~v  288 (288)
                      |+ .....+++++++  +|+++
T Consensus       230 g~~~~~~~~~~~l~~~~~g~~v  251 (339)
T cd08249         230 STPESAQLCAEALGRSGGGKLV  251 (339)
T ss_pred             ccchHHHHHHHHHhccCCCEEE
Confidence            98 556999999999  99875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=2.8e-31  Score=237.01  Aligned_cols=234  Identities=25%  Similarity=0.300  Sum_probs=200.9

Q ss_pred             ceEEEEccCCCCCc--ceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPDS--VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~~--~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      ||++++++++++..  .+++++.+.|.+.+++|+|++.++++|+.|+..+.+..+. ...|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~   79 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT   79 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence            58899999887541  3667778888889999999999999999999888776542 24567899999999999999999


Q ss_pred             CCCCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCC-----CCeEEEeCCC
Q 023007          126 RLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS-----GDSIVQNGAT  198 (288)
Q Consensus       126 ~~~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~vlI~g~~  198 (288)
                      +|++||+|+....  ..|+|++|+.++..+++++|+++++.+++.+++.+.+||+++.+.+.+.+     |++|+|+|++
T Consensus        80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~  159 (336)
T cd08252          80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGA  159 (336)
T ss_pred             CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCC
Confidence            9999999998742  35899999999999999999999999999999999999999888888887     9999999988


Q ss_pred             ChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc-ccHHH
Q 023007          199 SIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG-NSASK  276 (288)
Q Consensus       199 g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~-~~~~~  276 (288)
                      |++|++++++++.+| +++++++    .++++.++++++|++++++++....+.+... .+.+ +|+++||+|+ .....
T Consensus       160 g~vg~~~~~~a~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~-~d~vl~~~~~~~~~~~  233 (336)
T cd08252         160 GGVGSIAIQLAKQLTGLTVIATA----SRPESIAWVKELGADHVINHHQDLAEQLEAL-GIEP-VDYIFCLTDTDQHWDA  233 (336)
T ss_pred             chHHHHHHHHHHHcCCcEEEEEc----CChhhHHHHHhcCCcEEEeCCccHHHHHHhh-CCCC-CCEEEEccCcHHHHHH
Confidence            999999999999999 9999998    5778888999999999998875443455533 3334 9999999996 45699


Q ss_pred             HHhhccCCCeeC
Q 023007          277 VLKFLRFREEQW  288 (288)
Q Consensus       277 a~~~l~~~G~~v  288 (288)
                      ++++++++|+++
T Consensus       234 ~~~~l~~~g~~v  245 (336)
T cd08252         234 MAELIAPQGHIC  245 (336)
T ss_pred             HHHHhcCCCEEE
Confidence            999999999985

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=2.5e-31  Score=237.92  Aligned_cols=227  Identities=23%  Similarity=0.262  Sum_probs=188.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++.    +++++.+.|.+.++|++||+.++++|++|...+.|.++.. ++|.++|||++|+|+.+|++++.+
T Consensus         1 m~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~   75 (339)
T PRK10083          1 MKSIVIEKPNS----LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAA   75 (339)
T ss_pred             CeEEEEecCCe----eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccC
Confidence            68899988764    8899999999999999999999999999999888765432 468899999999999999999999


Q ss_pred             CCCCEEEecC--------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          128 APGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       128 ~~Gd~V~~~~--------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      ++||+|+..+                          ...|+|++|+.++..+++++|+++++..++ +..++.++|++ .
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~-~  153 (339)
T PRK10083         76 RIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV-T  153 (339)
T ss_pred             CCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH-H
Confidence            9999998421                          114899999999999999999999998876 45577788854 4


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANL  259 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~  259 (288)
                      ...++++|++|+|+|+ |++|++++|+|+. +|++++.+++   .++++.+.++++|++++++++.... +.+..  .+.
T Consensus       154 ~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~---~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~  227 (339)
T PRK10083        154 GRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVAD---RIDERLALAKESGADWVINNAQEPLGEALEE--KGI  227 (339)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEc---CCHHHHHHHHHhCCcEEecCccccHHHHHhc--CCC
Confidence            5688999999999995 9999999999996 6997655553   4788999999999999998876432 33322  222


Q ss_pred             CCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      + +|++|||+|+.. ...++++++++|+++
T Consensus       228 ~-~d~vid~~g~~~~~~~~~~~l~~~G~~v  256 (339)
T PRK10083        228 K-PTLIIDAACHPSILEEAVTLASPAARIV  256 (339)
T ss_pred             C-CCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence            2 679999999654 599999999999985

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.6e-31  Score=237.06  Aligned_cols=229  Identities=23%  Similarity=0.279  Sum_probs=191.3

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC----------CCCCCCcccccceEEEE
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP----------VRPKVPAVGGYEGVGEV  117 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~~G~e~~G~V  117 (288)
                      ||++++... .    +++++.+.|++.+++|+|++.++++|+.|+..+.|...          .....|.++|+|++|+|
T Consensus         1 m~a~~~~~~-~----~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   75 (341)
T cd08262           1 MRAAVFRDG-P----LVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV   75 (341)
T ss_pred             CceEEEeCC-c----eEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence            688888765 2    88999999999999999999999999999998877321          11234778999999999


Q ss_pred             EEecCCCCC-CCCCCEEEecCC----------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          118 YSVGSAVTR-LAPGDWVIPSPP----------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       118 ~~~G~~~~~-~~~Gd~V~~~~~----------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      +++|+++++ |++||+|++++.                ..|+|++|+.++.+.++++|+++++.+++ ++.++.+||+++
T Consensus        76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~  154 (341)
T cd08262          76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV  154 (341)
T ss_pred             EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence            999999987 999999998732                25899999999999999999999999877 566888999985


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH----HHHHHHh
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV----KNVKGLL  256 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~----~~i~~~~  256 (288)
                       ..+++++|++|+|+|+ |++|.+++|+++.+|++++.+++   .++++.+.++++|++++++++....    ..+..++
T Consensus       155 -~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~---~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~  229 (341)
T cd08262         155 -RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASD---FSPERRALALAMGADIVVDPAADSPFAAWAAELARA  229 (341)
T ss_pred             -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC---CCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHh
Confidence             6689999999999986 99999999999999998666553   4788889999999999998765421    1244455


Q ss_pred             cCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          257 ANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      .+.+ +|+++||+|+. ....++++++++|+++
T Consensus       230 ~~~~-~d~vid~~g~~~~~~~~~~~l~~~g~~v  261 (341)
T cd08262         230 GGPK-PAVIFECVGAPGLIQQIIEGAPPGGRIV  261 (341)
T ss_pred             CCCC-CCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence            5554 99999999985 5588999999999985

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=3.6e-31  Score=237.24  Aligned_cols=227  Identities=25%  Similarity=0.274  Sum_probs=193.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCC-CCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~-~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||++++.+++.    +++++++.|++. ++||+|++.++++|+.|.....|.++.  ..|.++|+|++|+|+++|+++++
T Consensus         1 ~~a~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~   74 (344)
T cd08284           1 MKAVVFKGPGD----VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRT   74 (344)
T ss_pred             CeeEEEecCCC----ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCccc
Confidence            67889887643    889999999875 999999999999999999888776553  34788999999999999999999


Q ss_pred             CCCCCEEEecCC------------------------------CCcccceEEEeeCC--cEEEcCCCCChhhhcccccchH
Q 023007          127 LAPGDWVIPSPP------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPL  174 (288)
Q Consensus       127 ~~~Gd~V~~~~~------------------------------~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~  174 (288)
                      +++||+|++.+.                              ..|++++|+.++.+  .++++|+++++.+++.++.+++
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~  154 (344)
T cd08284          75 LKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILP  154 (344)
T ss_pred             cCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchH
Confidence            999999998641                              13889999999965  9999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHH
Q 023007          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNV  252 (288)
Q Consensus       175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i  252 (288)
                      |||+++.. .++.+|++|+|+|+ |.+|++++++|+.+|+ +++++.    .++++.+.++++|+. .++.+.. +.+.+
T Consensus       155 ta~~~~~~-~~~~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~----~~~~~~~~~~~~g~~-~~~~~~~~~~~~l  227 (344)
T cd08284         155 TGYFGAKR-AQVRPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVD----PVPERLERAAALGAE-PINFEDAEPVERV  227 (344)
T ss_pred             HHHhhhHh-cCCccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEc----CCHHHHHHHHHhCCe-EEecCCcCHHHHH
Confidence            99999965 78999999999975 9999999999999997 777775    578888888999975 4555443 44667


Q ss_pred             HHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      .+++++.+ +|++|||+|+.. ...++++++++|+||
T Consensus       228 ~~~~~~~~-~dvvid~~~~~~~~~~~~~~l~~~g~~v  263 (344)
T cd08284         228 REATEGRG-ADVVLEAVGGAAALDLAFDLVRPGGVIS  263 (344)
T ss_pred             HHHhCCCC-CCEEEECCCCHHHHHHHHHhcccCCEEE
Confidence            77777665 999999999754 499999999999985

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=5e-31  Score=235.43  Aligned_cols=232  Identities=25%  Similarity=0.256  Sum_probs=201.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++.+...+.+.  +.+.+.+.|.+.+++|+|++.++++|+.|.....|.++.....|.++|+|++|+|+.+|++++++
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~   78 (338)
T cd08254           1 MKAWRFHKGSKGL--LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNF   78 (338)
T ss_pred             CeeEEEecCCCCc--eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccC
Confidence            6889998888753  57788888889999999999999999999999888776444567889999999999999999999


Q ss_pred             CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      ++||+|++.+.                          ..|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~  158 (338)
T cd08254          79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVV  158 (338)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence            99999987210                          1489999999999999999999999999999999999999998


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLP  260 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~g  260 (288)
                      ...+++++++|||.|+ |.+|++++++|+.+|++++.++    .++++.+.++++|.+++++.+.... +.+ ..+.+.+
T Consensus       159 ~~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~----~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~  232 (338)
T cd08254         159 RAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVD----IKEEKLELAKELGADEVLNSLDDSPKDKK-AAGLGGG  232 (338)
T ss_pred             hccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCCC
Confidence            8888999999999865 9999999999999999998887    5788889999999999988776543 334 5555554


Q ss_pred             CccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          261 EPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       261 ~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                       +|+++||+|... ...++++|+++|+|+
T Consensus       233 -~D~vid~~g~~~~~~~~~~~l~~~G~~v  260 (338)
T cd08254         233 -FDVIFDFVGTQPTFEDAQKAVKPGGRIV  260 (338)
T ss_pred             -ceEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence             999999998654 589999999999985

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.2e-31  Score=233.94  Aligned_cols=234  Identities=28%  Similarity=0.306  Sum_probs=204.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||+++++..+.. +.+++++.+.|.+.++|++|++.++++|+.|+....|.++.....|.++|||++|+|+++|+++.+|
T Consensus         1 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~   79 (336)
T cd08276           1 MKAWRLSGGGGL-DNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRF   79 (336)
T ss_pred             CeEEEEeccCCC-cceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCC
Confidence            789999877433 2378888888888999999999999999999998887665544567889999999999999999999


Q ss_pred             CCCCEEEecCC--------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCC
Q 023007          128 APGDWVIPSPP--------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN  187 (288)
Q Consensus       128 ~~Gd~V~~~~~--------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  187 (288)
                      ++||+|++...                    ..|++++|+.++.+.++++|+++++.+++.++.++.+||+++...+.++
T Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~  159 (336)
T cd08276          80 KVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLK  159 (336)
T ss_pred             CCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCC
Confidence            99999998751                    1478999999999999999999999999999999999999998888999


Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-c-cHHHHHHHhcCCCCccEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-L-EVKNVKGLLANLPEPALG  265 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~-~~~~i~~~~~~~g~~D~v  265 (288)
                      +|++|+|+| +|++|++++++++.+|++++.++    .++++.+.++++|.+.+++.+. . ..+.+..++++.+ +|++
T Consensus       160 ~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~  233 (336)
T cd08276         160 PGDTVLVQG-TGGVSLFALQFAKAAGARVIATS----SSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRG-VDHV  233 (336)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCC-CcEE
Confidence            999999996 59999999999999999999988    5788888888899999998765 3 4466777777666 9999


Q ss_pred             EECCCcccHHHHHhhccCCCeeC
Q 023007          266 FNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       266 ~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +||+++.....++++++++|+++
T Consensus       234 i~~~~~~~~~~~~~~l~~~G~~v  256 (336)
T cd08276         234 VEVGGPGTLAQSIKAVAPGGVIS  256 (336)
T ss_pred             EECCChHHHHHHHHhhcCCCEEE
Confidence            99999877799999999999985

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=3.7e-31  Score=236.66  Aligned_cols=227  Identities=20%  Similarity=0.196  Sum_probs=192.8

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++..   ..+++.|.|.+.++||+||+.++++|++|...+.|..+.  ..|.++|||++|+|+++|+++.+|
T Consensus         1 mka~~~~~~~~~---~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~~G~~v~~~   75 (338)
T PRK09422          1 MKAAVVNKDHTG---DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVKEVGPGVTSL   75 (338)
T ss_pred             CeEEEecCCCCC---ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEEEECCCCccC
Confidence            789999987763   237888999999999999999999999999988776543  236789999999999999999999


Q ss_pred             CCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|++.+                           ...|++++|+.++.++++++|+++++.+++.++.++.|||+++
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~  155 (338)
T PRK09422         76 KVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI  155 (338)
T ss_pred             CCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence            9999998621                           0148999999999999999999999999999999999999998


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc--ccHHHHHHHhc
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ--LEVKNVKGLLA  257 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~i~~~~~  257 (288)
                       ..+++++|++|+|+|+ |++|++++++++. .|+++++++    .++++.+.++++|.+.+++++.  ...+.+.++++
T Consensus       156 -~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~  229 (338)
T PRK09422        156 -KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVD----INDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG  229 (338)
T ss_pred             -HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEe----CChHHHHHHHHcCCcEEecccccccHHHHHHHhcC
Confidence             5688999999999995 9999999999998 499999998    5888999999999999998854  23455666655


Q ss_pred             CCCCccE-EEECCCcccHHHHHhhccCCCeeC
Q 023007          258 NLPEPAL-GFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~-v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                        + +|. ++++.++.....++++++++|+|+
T Consensus       230 --~-~d~vi~~~~~~~~~~~~~~~l~~~G~~v  258 (338)
T PRK09422        230 --G-AHAAVVTAVAKAAFNQAVDAVRAGGRVV  258 (338)
T ss_pred             --C-CcEEEEeCCCHHHHHHHHHhccCCCEEE
Confidence              3 885 455555555699999999999985

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=237.81  Aligned_cols=226  Identities=24%  Similarity=0.291  Sum_probs=197.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++++++++   +++++.|.|.+.++|++|++.++++|+.|+....|..+. ..+|..+|||++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~   76 (334)
T PRK13771          1 MKAVILPGFKQG---YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR-MKYPVILGHEVVGTVEEVGENVKGF   76 (334)
T ss_pred             CeeEEEcCCCCC---cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC-CCCCeeccccceEEEEEeCCCCccC
Confidence            689999988863   889999999999999999999999999999888776543 2457889999999999999999889


Q ss_pred             CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      ++||+|++...                          ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.
T Consensus        77 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~  156 (334)
T PRK13771         77 KPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR  156 (334)
T ss_pred             CCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence            99999998741                          1589999999999999999999999999999999999999998


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      .. .+.++++|+|+|++|.+|++++++++.+|++++.++    .++++.+.++++ ++++++++ ...+.+.++  +  +
T Consensus       157 ~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~----~~~~~~~~~~~~-~~~~~~~~-~~~~~v~~~--~--~  225 (334)
T PRK13771        157 RA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVT----SSESKAKIVSKY-ADYVIVGS-KFSEEVKKI--G--G  225 (334)
T ss_pred             hc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHH-HHHhcCch-hHHHHHHhc--C--C
Confidence            76 899999999999999999999999999999999888    578888888888 77777765 333455554  2  3


Q ss_pred             ccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          262 PALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       262 ~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +|+++||+|+.....++++++++|+++
T Consensus       226 ~d~~ld~~g~~~~~~~~~~l~~~G~~v  252 (334)
T PRK13771        226 ADIVIETVGTPTLEESLRSLNMGGKII  252 (334)
T ss_pred             CcEEEEcCChHHHHHHHHHHhcCCEEE
Confidence            999999999987799999999999975

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.3e-31  Score=234.07  Aligned_cols=227  Identities=29%  Similarity=0.331  Sum_probs=197.9

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++..+++   .+.+++.|.|.+.+++|+|++.++++|++|+..+.|..+. ...|.++|+|++|+|+++|+++++|
T Consensus         1 m~a~~~~~~~~---~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~   76 (332)
T cd08259           1 MKAAILHKPNK---PLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVEEVGEGVERF   76 (332)
T ss_pred             CeEEEEecCCC---ceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEEEECCCCccC
Confidence            68889876433   2888899999999999999999999999999998886554 2457899999999999999999999


Q ss_pred             CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      ++||+|+++..                          ..|++++|++++...++++|+++++.+++.++.++.+||+++.
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~  156 (332)
T cd08259          77 KPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK  156 (332)
T ss_pred             CCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence            99999998752                          1489999999999999999999999999999999999999998


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      . ..+.++++++|+|++|.+|++++++++..|++++.++    .++++.+.+++++.+.+++.++ ..+.+.+..   + 
T Consensus       157 ~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~-  226 (332)
T cd08259         157 R-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVT----RSPEKLKILKELGADYVIDGSK-FSEDVKKLG---G-  226 (332)
T ss_pred             H-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHcCCcEEEecHH-HHHHHHhcc---C-
Confidence            7 8899999999999999999999999999999999888    5677888888899888887655 334444432   3 


Q ss_pred             ccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          262 PALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       262 ~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +|+++||+|......++++++++|+++
T Consensus       227 ~d~v~~~~g~~~~~~~~~~~~~~g~~v  253 (332)
T cd08259         227 ADVVIELVGSPTIEESLRSLNKGGRLV  253 (332)
T ss_pred             CCEEEECCChHHHHHHHHHhhcCCEEE
Confidence            999999999888899999999999985

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=8.8e-31  Score=231.57  Aligned_cols=235  Identities=27%  Similarity=0.357  Sum_probs=205.4

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++...+.+ ..+.+.+.+.|.+.+++++|++.++++|+.|...+.|..+.....|.++|||++|+|+.+|+++++|
T Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (325)
T cd08253           1 MRAIRYHEFGAP-DVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGL   79 (325)
T ss_pred             CceEEEcccCCc-ccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCC
Confidence            578888876643 3378889999999999999999999999999988877654444567899999999999999999999


Q ss_pred             CCCCEEEecCC----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       128 ~~Gd~V~~~~~----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      ++||+|++...    ..|++++|+.++.+.++++|+++++.+++.++.++.+||+++....++.+|++++|+|+++++|+
T Consensus        80 ~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~  159 (325)
T cd08253          80 KVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGH  159 (325)
T ss_pred             CCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHH
Confidence            99999999862    15899999999999999999999999999999999999999988899999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR  282 (288)
Q Consensus       204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~  282 (288)
                      +++++++.+|++++.++    .++++.+.++++|.+.+++.... ..+.+.+++.+.+ +|+++||.|+......+++++
T Consensus       160 ~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~  234 (325)
T cd08253         160 AAVQLARWAGARVIATA----SSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQG-VDVIIEVLANVNLAKDLDVLA  234 (325)
T ss_pred             HHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCc-eEEEEECCchHHHHHHHHhhC
Confidence            99999999999999988    56788888889999988887654 3456767666655 999999999988888999999


Q ss_pred             CCCeeC
Q 023007          283 FREEQW  288 (288)
Q Consensus       283 ~~G~~v  288 (288)
                      ++|+++
T Consensus       235 ~~g~~v  240 (325)
T cd08253         235 PGGRIV  240 (325)
T ss_pred             CCCEEE
Confidence            999875

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.2e-31  Score=234.44  Aligned_cols=224  Identities=28%  Similarity=0.378  Sum_probs=191.3

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++ . +.+++++.+.|++.++||+||+.++++|++|...+.+. .. ..+|.++|||++|+|+.+|+++++|
T Consensus         1 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~-~~~~~~~g~e~~G~v~~vG~~v~~~   76 (325)
T cd08264           1 MKALVFEKSG-I-ENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KV-KPMPHIPGAEFAGVVEEVGDHVKGV   76 (325)
T ss_pred             CeeEEeccCC-C-CceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CC-CCCCeecccceeEEEEEECCCCCCC
Confidence            6889887766 2 34888888888899999999999999999999887642 11 1346789999999999999999999


Q ss_pred             CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      ++||+|++.+.                          ..|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.
T Consensus        77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~  156 (325)
T cd08264          77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK  156 (325)
T ss_pred             CCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence            99999997632                          2489999999999999999999999999999999999999987


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      . .++++|++|+|+|++|.+|++++++|+.+|++++.++    .    .+.++++|+++++++++. .+.+.+++ +  +
T Consensus       157 ~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~----~----~~~~~~~g~~~~~~~~~~-~~~l~~~~-~--~  223 (325)
T cd08264         157 T-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVS----R----KDWLKEFGADEVVDYDEV-EEKVKEIT-K--M  223 (325)
T ss_pred             h-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEe----H----HHHHHHhCCCeeecchHH-HHHHHHHh-C--C
Confidence            6 8999999999999999999999999999999988876    1    256678999999887653 34566666 3  4


Q ss_pred             ccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          262 PALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       262 ~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +|+++||+|+.....++++|+++|+|+
T Consensus       224 ~d~vl~~~g~~~~~~~~~~l~~~g~~v  250 (325)
T cd08264         224 ADVVINSLGSSFWDLSLSVLGRGGRLV  250 (325)
T ss_pred             CCEEEECCCHHHHHHHHHhhccCCEEE
Confidence            999999999876799999999999985

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-30  Score=230.45  Aligned_cols=232  Identities=24%  Similarity=0.350  Sum_probs=195.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||+++.++.+.  ..+++++++.|.+.+++|+|++.++++|+.|...+.+.+.. ...|.++|+|++|+|+.+|++++.|
T Consensus         1 ~~~~~~~~~~~--~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~   77 (306)
T cd08258           1 MKALVKTGPGP--GNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGW   77 (306)
T ss_pred             CeeEEEecCCC--CceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcC
Confidence            57888876442  33889999999999999999999999999999888876522 2346889999999999999999999


Q ss_pred             CCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|++...                           ..|+|++|++++...++++|+++++.+++ ++.++.++|+++
T Consensus        78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l  156 (306)
T cd08258          78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAV  156 (306)
T ss_pred             CCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHH
Confidence            99999998652                           14899999999999999999999999887 677889999999


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCC
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANL  259 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~  259 (288)
                      ...+.+++|++|+|.| +|.+|++++++|+.+|++++.+...  .++++.+.++++|++++ +++... .+.+..++++.
T Consensus       157 ~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~  232 (306)
T cd08258         157 AERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTE--KDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGD  232 (306)
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCC--CCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence            8889999999999977 5999999999999999998776322  35667788899999888 776543 35566666665


Q ss_pred             CCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      + +|+++||.|+. ....++++|+++|+|+
T Consensus       233 ~-vd~vld~~g~~~~~~~~~~~l~~~G~~v  261 (306)
T cd08258         233 G-ADVVIECSGAVPALEQALELLRKGGRIV  261 (306)
T ss_pred             C-CCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence            5 99999999764 4488999999999985

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.2e-31  Score=230.57  Aligned_cols=219  Identities=25%  Similarity=0.335  Sum_probs=189.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+.+ + ..+++++.+.|.+.++||+||+.++++|+.|.....+.     ..|.++|||++|+|+++|+++.+|
T Consensus         1 ~~~~~~~~~~-~-~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~~~G~~v~~~   73 (305)
T cd08270           1 MRALVVDPDA-P-LRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVERAAADGSGP   73 (305)
T ss_pred             CeEEEEccCC-C-ceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEEEeCCCCCCC
Confidence            5889888765 3 34888899999999999999999999999998876521     225789999999999999999999


Q ss_pred             CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHH
Q 023007          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (288)
Q Consensus       128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~  207 (288)
                      ++||+|+++.. .|+|++|+.++.++++++|+++++.+++.+++.+.+||+++...... +|++|+|+|++|++|+++++
T Consensus        74 ~~Gd~V~~~~~-~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~  151 (305)
T cd08270          74 AVGARVVGLGA-MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQ  151 (305)
T ss_pred             CCCCEEEEecC-CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHH
Confidence            99999998753 58999999999999999999999999999999999999999876655 59999999999999999999


Q ss_pred             HHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCee
Q 023007          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQ  287 (288)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~  287 (288)
                      +++.+|++++.++    .++++.+.++++|++.+++...       .+.++  ++|+++||+|+.....++++++++|++
T Consensus       152 ~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~-------~~~~~--~~d~vl~~~g~~~~~~~~~~l~~~G~~  218 (305)
T cd08270         152 LAALAGAHVVAVV----GSPARAEGLRELGAAEVVVGGS-------ELSGA--PVDLVVDSVGGPQLARALELLAPGGTV  218 (305)
T ss_pred             HHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEeccc-------cccCC--CceEEEECCCcHHHHHHHHHhcCCCEE
Confidence            9999999999988    5788899999999876654332       12222  499999999998779999999999998


Q ss_pred             C
Q 023007          288 W  288 (288)
Q Consensus       288 v  288 (288)
                      +
T Consensus       219 v  219 (305)
T cd08270         219 V  219 (305)
T ss_pred             E
Confidence            5

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=1.4e-30  Score=231.34  Aligned_cols=230  Identities=22%  Similarity=0.273  Sum_probs=193.5

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.++|++ +.+++++.|.|.+.++||+|++.++++|+.|...+.|..+.....|.++|||++|+|++  ++++++
T Consensus         1 ~~a~~~~~~~~~-~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~   77 (324)
T cd08288           1 FKALVLEKDDGG-TSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRF   77 (324)
T ss_pred             CeeEEEeccCCC-cceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCC
Confidence            789999988876 44889999999999999999999999999999888776543334577899999999998  777889


Q ss_pred             CCCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHh--hcCCC-CCCeEEEeCCCC
Q 023007          128 APGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED--FTTLN-SGDSIVQNGATS  199 (288)
Q Consensus       128 ~~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~-~g~~vlI~g~~g  199 (288)
                      ++||+|+++..     ..|+|++|+.++.+.++++|+++++.+++.++..+++++.++..  ..... +|++|+|+|++|
T Consensus        78 ~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g  157 (324)
T cd08288          78 KPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAG  157 (324)
T ss_pred             CCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCc
Confidence            99999998641     25899999999999999999999999999999999998877641  13444 678999999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHh
Q 023007          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (288)
Q Consensus       200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~  279 (288)
                      .+|++++++|+.+|+++++++    .++++.+.++++|+++++++++.. ..+..++++  ++|.++||++++....++.
T Consensus       158 ~vg~~~~~~A~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~--~~~~~~d~~~~~~~~~~~~  230 (324)
T cd08288         158 GVGSVAVALLARLGYEVVAST----GRPEEADYLRSLGASEIIDRAELS-EPGRPLQKE--RWAGAVDTVGGHTLANVLA  230 (324)
T ss_pred             HHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHhcCCCEEEEcchhh-HhhhhhccC--cccEEEECCcHHHHHHHHH
Confidence            999999999999999999988    578899999999999999887533 244455544  4899999999866678888


Q ss_pred             hccCCCee
Q 023007          280 FLRFREEQ  287 (288)
Q Consensus       280 ~l~~~G~~  287 (288)
                      +++.+|++
T Consensus       231 ~~~~~g~~  238 (324)
T cd08288         231 QTRYGGAV  238 (324)
T ss_pred             HhcCCCEE
Confidence            88888876

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-30  Score=230.78  Aligned_cols=234  Identities=26%  Similarity=0.342  Sum_probs=204.2

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++.+. .+++++.+.|.+.+++|+|++.++++|+.|.....+........|.++|||++|+|+.+|+++.+|
T Consensus         1 ~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~   79 (326)
T cd08272           1 MKALVLESFGGPE-VFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRF   79 (326)
T ss_pred             CeEEEEccCCCch-heEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCC
Confidence            6899999887654 377888887788999999999999999999998877654333457889999999999999999999


Q ss_pred             CCCCEEEecCC----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       128 ~~Gd~V~~~~~----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      ++||+|+++..    ..|++++|+.++.++++++|+++++..++.++..+.+||+++.+..++++|++++|+|++|.+|+
T Consensus        80 ~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~  159 (326)
T cd08272          80 RVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGH  159 (326)
T ss_pred             CCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHH
Confidence            99999998752    14789999999999999999999999999999999999999888899999999999999899999


Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccC
Q 023007          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF  283 (288)
Q Consensus       204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~  283 (288)
                      +++++++.+|++++.++    .+ ++.++++++|.+.+++.+....+.+..++++.+ +|+++||.|+.....+++++++
T Consensus       160 ~~~~~a~~~g~~v~~~~----~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~d~v~~~~~~~~~~~~~~~l~~  233 (326)
T cd08272         160 VAVQLAKAAGARVYATA----SS-EKAAFARSLGADPIIYYRETVVEYVAEHTGGRG-FDVVFDTVGGETLDASFEAVAL  233 (326)
T ss_pred             HHHHHHHHcCCEEEEEe----ch-HHHHHHHHcCCCEEEecchhHHHHHHHhcCCCC-CcEEEECCChHHHHHHHHHhcc
Confidence            99999999999999887    45 778888899999888876554466777777766 9999999998777889999999


Q ss_pred             CCeeC
Q 023007          284 REEQW  288 (288)
Q Consensus       284 ~G~~v  288 (288)
                      +|+++
T Consensus       234 ~g~~v  238 (326)
T cd08272         234 YGRVV  238 (326)
T ss_pred             CCEEE
Confidence            99875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=1.5e-30  Score=229.78  Aligned_cols=234  Identities=27%  Similarity=0.358  Sum_probs=204.2

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++.+. .+++++.+.|.+.+++++||+.++++|+.|+..+.+.++....+|.++|||++|+|+++|+++.++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~   79 (323)
T cd05276           1 MKAIVIKEPGGPE-VLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGW   79 (323)
T ss_pred             CeEEEEecCCCcc-cceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCC
Confidence            6899998876543 377888888788999999999999999999998877655444567899999999999999999999


Q ss_pred             CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHH
Q 023007          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (288)
Q Consensus       128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~  207 (288)
                      ++||+|+++.. .|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.....+.++++|+|+|++|++|+++++
T Consensus        80 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~  158 (323)
T cd05276          80 KVGDRVCALLA-GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQ  158 (323)
T ss_pred             CCCCEEEEecC-CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHH
Confidence            99999998753 48999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             HHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCe
Q 023007          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREE  286 (288)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~  286 (288)
                      +++..|++++.+.    .++++.+.++++|.+.+++.... ..+.+..++.+.+ +|++|||.|+.....++++++++|+
T Consensus       159 ~~~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~g~~~~~~~~~~~~~~g~  233 (323)
T cd05276         159 LAKALGARVIATA----GSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRG-VDVILDMVGGDYLARNLRALAPDGR  233 (323)
T ss_pred             HHHHcCCEEEEEc----CCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCC-eEEEEECCchHHHHHHHHhhccCCE
Confidence            9999999998887    56788888888999888887653 3355666666544 9999999998888889999999998


Q ss_pred             eC
Q 023007          287 QW  288 (288)
Q Consensus       287 ~v  288 (288)
                      ++
T Consensus       234 ~i  235 (323)
T cd05276         234 LV  235 (323)
T ss_pred             EE
Confidence            74

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.8e-30  Score=231.81  Aligned_cols=226  Identities=27%  Similarity=0.309  Sum_probs=191.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++.    +++.+.+.|++.++||+||+.++++|+.|+....|.++.  .+|.++|+|++|+|+.+|+++++|
T Consensus         1 ~~a~~~~~~~~----~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~--~~p~~~g~~~~G~v~~vG~~v~~~   74 (334)
T cd08234           1 MKALVYEGPGE----LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA--APPLVPGHEFAGVVVAVGSKVTGF   74 (334)
T ss_pred             CeeEEecCCCc----eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC--CCCcccccceEEEEEEeCCCCCCC
Confidence            68899988764    889999999999999999999999999999988887653  357799999999999999999999


Q ss_pred             CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      ++||+|++...                          ..|++++|+.++.++++++|+++++.+++.+ .++.++++++ 
T Consensus        75 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-  152 (334)
T cd08234          75 KVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-  152 (334)
T ss_pred             CCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-
Confidence            99999987211                          2589999999999999999999999998766 6788999998 


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g  260 (288)
                      ..+++++|++|+|+|+ |.+|++++++|+.+|++ ++++.    .++++.+.++++|.+.+++++......- .++.+.+
T Consensus       153 ~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~  226 (334)
T cd08234         153 DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAE----PNEEKLELAKKLGATETVDPSREDPEAQ-KEDNPYG  226 (334)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCeEEecCCCCCHHHH-HHhcCCC
Confidence            6789999999999975 99999999999999998 66665    5788888889999988888765432222 4445444


Q ss_pred             CccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          261 EPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       261 ~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                       +|++|||+|... ...++++|+++|+|+
T Consensus       227 -vd~v~~~~~~~~~~~~~~~~l~~~G~~v  254 (334)
T cd08234         227 -FDVVIEATGVPKTLEQAIEYARRGGTVL  254 (334)
T ss_pred             -CcEEEECCCChHHHHHHHHHHhcCCEEE
Confidence             999999998654 488999999999984

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=1.9e-30  Score=231.08  Aligned_cols=229  Identities=26%  Similarity=0.358  Sum_probs=197.0

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~  128 (288)
                      |++.+...+.+.. +++++.+.|.+.+++++|++.++++|+.|..++.+..+....+|.++|||++|+|+.+|+++++|+
T Consensus         2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (331)
T cd08273           2 REVVVTRRGGPEV-LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE   80 (331)
T ss_pred             eeEEEccCCCccc-EEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence            7888888776643 889999999999999999999999999999988776544335678899999999999999999999


Q ss_pred             CCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHH
Q 023007          129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI  208 (288)
Q Consensus       129 ~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~l  208 (288)
                      +||+|+++.. .|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.+.+.+.+|++|+|+|++|++|++++++
T Consensus        81 ~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~  159 (331)
T cd08273          81 VGDRVAALTR-VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLEL  159 (331)
T ss_pred             CCCEEEEeCC-CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHH
Confidence            9999999864 389999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      ++.+|++++.++    . +++.+.++++|... ++.+....... ....+  ++|+++||+|+.....++++++++|+++
T Consensus       160 a~~~g~~v~~~~----~-~~~~~~~~~~g~~~-~~~~~~~~~~~-~~~~~--~~d~vl~~~~~~~~~~~~~~l~~~g~~v  230 (331)
T cd08273         160 ALLAGAEVYGTA----S-ERNHAALRELGATP-IDYRTKDWLPA-MLTPG--GVDVVFDGVGGESYEESYAALAPGGTLV  230 (331)
T ss_pred             HHHcCCEEEEEe----C-HHHHHHHHHcCCeE-EcCCCcchhhh-hccCC--CceEEEECCchHHHHHHHHHhcCCCEEE
Confidence            999999999888    4 77888888899754 34433222111 33333  4999999999988899999999999985

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.98  E-value=1.8e-30  Score=232.71  Aligned_cols=229  Identities=24%  Similarity=0.222  Sum_probs=189.3

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC--CCCCCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      ||++.+.++++   .+++.+.|.|.+.++||+||+.++++|++|..++.+...  .....|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~   77 (341)
T PRK05396          1 MKALVKLKAEP---GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT   77 (341)
T ss_pred             CceEEEecCCC---ceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence            68899988774   389999999999999999999999999999987665321  1223567899999999999999999


Q ss_pred             CCCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007          126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (288)
Q Consensus       126 ~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~  179 (288)
                      ++++||+|++.+.                          ..|+|++|+.++.++++++|+++++.+++.+ .++.+++++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~  156 (341)
T PRK05396         78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT  156 (341)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence            9999999998621                          2589999999999999999999999888754 466666665


Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhc
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLA  257 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~  257 (288)
                      +..  ...+|++|+|.|+ |++|++++++|+.+|++ ++++.    .++++.++++++|++++++++... .+.+..+++
T Consensus       157 ~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  229 (341)
T PRK05396        157 ALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITD----VNEYRLELARKMGATRAVNVAKEDLRDVMAELGM  229 (341)
T ss_pred             HHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHhCCcEEecCccccHHHHHHHhcC
Confidence            543  3468999999875 99999999999999995 55554    578888999999999999887643 456777777


Q ss_pred             CCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +.+ +|++|||.|+... +.++++++++|+++
T Consensus       230 ~~~-~d~v~d~~g~~~~~~~~~~~l~~~G~~v  260 (341)
T PRK05396        230 TEG-FDVGLEMSGAPSAFRQMLDNMNHGGRIA  260 (341)
T ss_pred             CCC-CCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            665 9999999987554 89999999999875

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.98  E-value=3.2e-30  Score=234.07  Aligned_cols=226  Identities=23%  Similarity=0.238  Sum_probs=190.9

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||++++.+++.    +++++.|.|.+ .++|++||+.++++|+.|++.+.|..+.  ..|.++|||++|+|+++|+++.+
T Consensus         1 m~~~~~~~~~~----~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~   74 (375)
T cd08282           1 MKAVVYGGPGN----VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVES   74 (375)
T ss_pred             CceEEEecCCc----eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCc
Confidence            57888877653    88999999985 7999999999999999999998886652  45789999999999999999999


Q ss_pred             CCCCCEEEecCC------------------------------------CCcccceEEEeeCC--cEEEcCCCCChh---h
Q 023007          127 LAPGDWVIPSPP------------------------------------SSGTWQSYVVKDQS--VWHKVSKDSPME---Y  165 (288)
Q Consensus       127 ~~~Gd~V~~~~~------------------------------------~~G~~a~~~~~~~~--~l~~ip~~~~~~---~  165 (288)
                      +++||+|++.+.                                    ..|+|++|+.++..  .++++|+++++.   .
T Consensus        75 ~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~  154 (375)
T cd08282          75 LKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDD  154 (375)
T ss_pred             CCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhh
Confidence            999999987221                                    13889999999976  899999999998   5


Q ss_pred             hcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeC
Q 023007          166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTE  244 (288)
Q Consensus       166 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~  244 (288)
                      ++.+..++.+||+++ ..+.+++|++|+|.|+ |++|++++++++.+|+ +++++.    .++++.+.++++|+ ..+++
T Consensus       155 ~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~----~~~~~~~~~~~~g~-~~v~~  227 (375)
T cd08282         155 YLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVD----HVPERLDLAESIGA-IPIDF  227 (375)
T ss_pred             eeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHcCC-eEecc
Confidence            678888899999998 6689999999999876 9999999999999998 677754    57888999999998 45666


Q ss_pred             Ccc-cHHHHHHHhcCCCCccEEEECCCccc------------HHHHHhhccCCCeeC
Q 023007          245 SQL-EVKNVKGLLANLPEPALGFNCVGGNS------------ASKVLKFLRFREEQW  288 (288)
Q Consensus       245 ~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~------------~~~a~~~l~~~G~~v  288 (288)
                      ++. ..+.+.++++ . ++|++|||+|++.            +..++++++++|+++
T Consensus       228 ~~~~~~~~i~~~~~-~-~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~  282 (375)
T cd08282         228 SDGDPVEQILGLEP-G-GVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIG  282 (375)
T ss_pred             CcccHHHHHHHhhC-C-CCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEE
Confidence            543 3466777766 3 4999999999874            588899999999873

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.98  E-value=1.9e-30  Score=232.66  Aligned_cols=226  Identities=24%  Similarity=0.282  Sum_probs=189.4

Q ss_pred             EEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCC-CCC-CCCCCcccccceEEEEEEecCCCCCCC
Q 023007           51 VVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGV-YPV-RPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (288)
Q Consensus        51 ~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~-~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~  128 (288)
                      +++++...    +.+++.+.|.+.++||+|++.++++|+.|...+.+. ... ....|.++|+|++|+|+++|+++++|+
T Consensus         2 ~~~~~~~~----~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   77 (343)
T cd05285           2 AVLHGPGD----LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLK   77 (343)
T ss_pred             ceEecCCc----eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCC
Confidence            45555543    888999999999999999999999999998876432 111 113467899999999999999999999


Q ss_pred             CCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          129 PGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       129 ~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      +||+|++.+                           ...|+|++|++++.+.++++|+++++.+++.+ .++.+||+++ 
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-  155 (343)
T cd05285          78 VGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-  155 (343)
T ss_pred             CCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence            999998621                           02489999999999999999999999998877 5788999987 


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc----HHHHHHHh
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLL  256 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~i~~~~  256 (288)
                      ..+++++|++|+|+|+ |++|++++++|+.+|++ ++++.    .++++.++++++|++++++++...    .+.+.+++
T Consensus       156 ~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~  230 (343)
T cd05285         156 RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTD----IDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELL  230 (343)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHh
Confidence            6799999999999876 89999999999999998 77776    578888889999999999887643    56677777


Q ss_pred             cCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          257 ANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      ++.+ +|++|||.|+. ..+.++++++++|+++
T Consensus       231 ~~~~-~d~vld~~g~~~~~~~~~~~l~~~G~~v  262 (343)
T cd05285         231 GGKG-PDVVIECTGAESCIQTAIYATRPGGTVV  262 (343)
T ss_pred             CCCC-CCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence            7765 99999999986 5589999999999985

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=6.7e-30  Score=226.56  Aligned_cols=233  Identities=27%  Similarity=0.335  Sum_probs=202.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.++++ .+.+.+++.|.|++.+++|+||+.++++|+.|+..+.+..... ..|.++|||++|+|+.+|+++.++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~   78 (325)
T cd08271           1 MKAWVLPKPGA-ALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGW   78 (325)
T ss_pred             CeeEEEccCCC-cceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcC
Confidence            68999999884 2348999999999999999999999999999998887654321 236789999999999999999999


Q ss_pred             CCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHH
Q 023007          128 APGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (288)
Q Consensus       128 ~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a  205 (288)
                      ++||+|+++..  ..|+|++|+.++.+.++++|+++++.+++.+.+++.++++++.+.+++++|++++|+|++|++|+++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~  158 (325)
T cd08271          79 KVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFA  158 (325)
T ss_pred             CCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHH
Confidence            99999998752  1479999999999999999999999999999999999999998889999999999999989999999


Q ss_pred             HHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCC
Q 023007          206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR  284 (288)
Q Consensus       206 ~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~  284 (288)
                      +++++..|++++.++     ++++.+.++++|.+.+++.+.. ..+.+..++++.+ +|+++||.++.....++++++++
T Consensus       159 ~~~a~~~g~~v~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~  232 (325)
T cd08271         159 VQLAKRAGLRVITTC-----SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRG-VDAVLDTVGGETAAALAPTLAFN  232 (325)
T ss_pred             HHHHHHcCCEEEEEE-----cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCC-CcEEEECCCcHhHHHHHHhhccC
Confidence            999999999988876     3466678888999988887654 3456777777665 99999999998777789999999


Q ss_pred             CeeC
Q 023007          285 EEQW  288 (288)
Q Consensus       285 G~~v  288 (288)
                      |+++
T Consensus       233 G~~v  236 (325)
T cd08271         233 GHLV  236 (325)
T ss_pred             CEEE
Confidence            9874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.98  E-value=5.9e-30  Score=228.18  Aligned_cols=235  Identities=31%  Similarity=0.383  Sum_probs=201.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++...+.+. .+++++.+.|.+.+++|+|++.++++|+.|...+.|........|..+|||++|+|+.+|+++.+|
T Consensus         1 ~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~   79 (342)
T cd08266           1 MKAVVIRGHGGPE-VLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNV   79 (342)
T ss_pred             CeEEEEecCCCcc-ceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCC
Confidence            6888888555432 378888888888999999999999999999998887654333557889999999999999999999


Q ss_pred             CCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          128 APGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       128 ~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      ++||+|++.+.                          ..|++++|+.++.+.++++|+++++.+++.++.++.+||+++.
T Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~  159 (342)
T cd08266          80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLV  159 (342)
T ss_pred             CCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHH
Confidence            99999998732                          2478999999999999999999999999999999999999998


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLP  260 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g  260 (288)
                      +..++.++++++|+|+++.+|++++++++..|++++.+.    .++++.+.++.++.+.+++.... ..+.+...+.+.+
T Consensus       160 ~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (342)
T cd08266         160 TRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATA----GSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRG  235 (342)
T ss_pred             HhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCC
Confidence            889999999999999988999999999999999998887    57778888888888888876553 3355666665544


Q ss_pred             CccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          261 EPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       261 ~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                       +|+++||.|+...+.++++++++|+++
T Consensus       236 -~d~~i~~~g~~~~~~~~~~l~~~G~~v  262 (342)
T cd08266         236 -VDVVVEHVGAATWEKSLKSLARGGRLV  262 (342)
T ss_pred             -CcEEEECCcHHHHHHHHHHhhcCCEEE
Confidence             999999999987899999999999875

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=8.5e-30  Score=224.59  Aligned_cols=231  Identities=29%  Similarity=0.363  Sum_probs=199.6

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~  128 (288)
                      |++.+..++.. ..+.+.+.+.+.+.+++++|++.++++|+.|.....+..+.  .+|.++|||++|+|+.+|+++.+|+
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~   77 (320)
T cd05286           1 KAVRIHKTGGP-EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFK   77 (320)
T ss_pred             CeEEEecCCCc-cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCC
Confidence            35566555543 23667777777789999999999999999999888776543  3467899999999999999999999


Q ss_pred             CCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHH
Q 023007          129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI  208 (288)
Q Consensus       129 ~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~l  208 (288)
                      +||+|+++. ..|++++|+.++.+.++++|+++++.+++.++..+.++|+++....++++|++|+|+|++|++|++++++
T Consensus        78 ~G~~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~  156 (320)
T cd05286          78 VGDRVAYAG-PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQW  156 (320)
T ss_pred             CCCEEEEec-CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence            999999874 1479999999999999999999999999999999999999998889999999999999989999999999


Q ss_pred             HHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCee
Q 023007          209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQ  287 (288)
Q Consensus       209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~  287 (288)
                      ++.+|+++++++    .++++.+.++++|++++++.+.. ..+.+..++.+.+ +|+++||+++...+.++++++++|++
T Consensus       157 a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~~~~~~~~~~~~l~~~g~~  231 (320)
T cd05286         157 AKALGATVIGTV----SSEEKAELARAAGADHVINYRDEDFVERVREITGGRG-VDVVYDGVGKDTFEGSLDSLRPRGTL  231 (320)
T ss_pred             HHHcCCEEEEEc----CCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCC-eeEEEECCCcHhHHHHHHhhccCcEE
Confidence            999999999988    57888888999999999887653 3456777777665 99999999987779999999999998


Q ss_pred             C
Q 023007          288 W  288 (288)
Q Consensus       288 v  288 (288)
                      +
T Consensus       232 v  232 (320)
T cd05286         232 V  232 (320)
T ss_pred             E
Confidence            5

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=3.5e-30  Score=228.60  Aligned_cols=214  Identities=23%  Similarity=0.266  Sum_probs=180.8

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+++.    +++++.+.|++.++||+||+.++++|+.|.....|.++    .|.++|||++|+|+++|++   +
T Consensus         1 ~~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~   69 (319)
T cd08242           1 MKALVLDGGLD----LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---E   69 (319)
T ss_pred             CeeEEEeCCCc----EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---C
Confidence            68899987653    89999999999999999999999999999998887654    3678999999999999987   6


Q ss_pred             CCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|...+                           ...|+|++|+.++.++++++|++++..+++.+ .+..++|..+
T Consensus        70 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~  148 (319)
T cd08242          70 LVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL  148 (319)
T ss_pred             CCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH
Confidence            7999997421                           12589999999999999999999999888764 3455666555


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCC
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g  260 (288)
                       +..++++|++|+|+|+ |.+|++++|+|+.+|+++++++    .++++.++++++|++.+++++..        +++.+
T Consensus       149 -~~~~~~~g~~vlV~g~-g~vg~~~~q~a~~~G~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~  214 (319)
T cd08242         149 -EQVPITPGDKVAVLGD-GKLGLLIAQVLALTGPDVVLVG----RHSEKLALARRLGVETVLPDEAE--------SEGGG  214 (319)
T ss_pred             -HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCcEEeCcccc--------ccCCC
Confidence             5688999999999975 9999999999999999988887    57899999999999988876442        34444


Q ss_pred             CccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          261 EPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       261 ~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                       +|++|||+|+.. ...++++++++|+++
T Consensus       215 -~d~vid~~g~~~~~~~~~~~l~~~g~~v  242 (319)
T cd08242         215 -FDVVVEATGSPSGLELALRLVRPRGTVV  242 (319)
T ss_pred             -CCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence             999999998854 488999999999884

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.97  E-value=2.5e-30  Score=217.44  Aligned_cols=213  Identities=24%  Similarity=0.299  Sum_probs=180.6

Q ss_pred             ceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceE----EEEEEecCCCCCCCCCCEEEecC
Q 023007           62 VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGV----GEVYSVGSAVTRLAPGDWVIPSP  137 (288)
Q Consensus        62 ~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~----G~V~~~G~~~~~~~~Gd~V~~~~  137 (288)
                      .+++++.+.|+++.+|||+|+.|.+++|+.+..++....  .-.|.-+|....    |+|++  +..++|++||.|....
T Consensus        26 ~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~S--Y~~P~~lG~~~~gg~V~~Vv~--S~~~~f~~GD~V~~~~  101 (340)
T COG2130          26 DFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAPS--YAPPVELGEVMVGGTVAKVVA--SNHPGFQPGDIVVGVS  101 (340)
T ss_pred             CceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCcc--cCCCcCCCceeECCeeEEEEe--cCCCCCCCCCEEEecc
Confidence            388999999999999999999999999987665543321  233566665544    44544  6788999999999863


Q ss_pred             CCCcccceEEEeeCCcEEEcCCCCC--hhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe
Q 023007          138 PSSGTWQSYVVKDQSVWHKVSKDSP--MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH  215 (288)
Q Consensus       138 ~~~G~~a~~~~~~~~~l~~ip~~~~--~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~  215 (288)
                          +|++|..++.+.+.|+.++.-  ......+..+..|||.+|.+++++++|++|+|.+|+|++|..+.|+||..|++
T Consensus       102 ----GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~r  177 (340)
T COG2130         102 ----GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCR  177 (340)
T ss_pred             ----cceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCe
Confidence                999999999999999975422  23356677789999999999999999999999999999999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcccH-HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          216 SINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       216 vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      |+.++    .+++|.+++++ +|+|.++||+..++ +.+.+.+..  ++|++|||+|++.++..+..|+..+|+.
T Consensus       178 VVGia----Gg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~--GIDvyfeNVGg~v~DAv~~~ln~~aRi~  246 (340)
T COG2130         178 VVGIA----GGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPK--GIDVYFENVGGEVLDAVLPLLNLFARIP  246 (340)
T ss_pred             EEEec----CCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCC--CeEEEEEcCCchHHHHHHHhhcccccee
Confidence            99999    78999999987 99999999998754 667777775  5999999999999999999999999974

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=8.8e-30  Score=225.61  Aligned_cols=235  Identities=29%  Similarity=0.386  Sum_probs=203.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.+.+.+. .+.+.+.+.|.+.+++++|++.++++|+.|.....+........|..+|||++|+|+.+|+++.+|
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~   79 (328)
T cd08268           1 MRAVRFHQFGGPE-VLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGF   79 (328)
T ss_pred             CeEEEEeccCCcc-eeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcC
Confidence            5788888766542 377888888888999999999999999999988777655444557889999999999999999999


Q ss_pred             CCCCEEEecCC----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          128 APGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       128 ~~Gd~V~~~~~----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      ++||+|++++.    ..|.+++|+.++.+.++++|+++++.+++.++.++.++|+++.....+.++++++|+|++|++|+
T Consensus        80 ~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~  159 (328)
T cd08268          80 AVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGL  159 (328)
T ss_pred             CCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHH
Confidence            99999998753    24899999999999999999999999999999999999999988889999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR  282 (288)
Q Consensus       204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~  282 (288)
                      +++++++..|++++.++    .++++.+.++++|.+.+++.+... .+.+..++.+.+ +|+++||.|+.....++++++
T Consensus       160 ~~~~~~~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~  234 (328)
T cd08268         160 AAIQIANAAGATVIATT----RTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKG-VDVVFDPVGGPQFAKLADALA  234 (328)
T ss_pred             HHHHHHHHcCCEEEEEc----CCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCC-ceEEEECCchHhHHHHHHhhc
Confidence            99999999999999998    567888888889988888876543 355666666655 999999999977799999999


Q ss_pred             CCCeeC
Q 023007          283 FREEQW  288 (288)
Q Consensus       283 ~~G~~v  288 (288)
                      ++|+++
T Consensus       235 ~~g~~v  240 (328)
T cd08268         235 PGGTLV  240 (328)
T ss_pred             cCCEEE
Confidence            999975

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.97  E-value=6.2e-30  Score=229.42  Aligned_cols=229  Identities=24%  Similarity=0.323  Sum_probs=189.2

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||+++++++++    +++++.|.|.+ .++||+||+.++++|++|+..+.|.++.  ..|.++|||++|+|+++|+++.+
T Consensus         1 m~~~~~~~~~~----~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~   74 (345)
T cd08287           1 MRATVIHGPGD----IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTS   74 (345)
T ss_pred             CceeEEecCCc----eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCc
Confidence            68899987664    88999999985 8999999999999999999888776543  34789999999999999999999


Q ss_pred             CCCCCEEEe-cCC-------------------------CCcccceEEEeeCC--cEEEcCCCCChhhhc-----ccccch
Q 023007          127 LAPGDWVIP-SPP-------------------------SSGTWQSYVVKDQS--VWHKVSKDSPMEYAA-----TIIVNP  173 (288)
Q Consensus       127 ~~~Gd~V~~-~~~-------------------------~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa-----~l~~~~  173 (288)
                      +++||+|++ +..                         ..|+|++|+.++.+  .++++|+++++..+.     .+...+
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~  154 (345)
T cd08287          75 VKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVM  154 (345)
T ss_pred             cCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHH
Confidence            999999987 211                         13889999999975  999999999983222     222567


Q ss_pred             HHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHH
Q 023007          174 LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNV  252 (288)
Q Consensus       174 ~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i  252 (288)
                      .+||+++. ..++++|++|+|.|+ |++|++++++|+.+|++++.+++   .++++.+.++++|++++++++.. ..+.+
T Consensus       155 ~~a~~~~~-~~~~~~g~~vlI~g~-g~vg~~~~~lak~~G~~~v~~~~---~~~~~~~~~~~~ga~~v~~~~~~~~~~~i  229 (345)
T cd08287         155 GTGHHAAV-SAGVRPGSTVVVVGD-GAVGLCAVLAAKRLGAERIIAMS---RHEDRQALAREFGATDIVAERGEEAVARV  229 (345)
T ss_pred             HHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHcCCceEecCCcccHHHHH
Confidence            88999885 588999999999875 99999999999999997444443   46778888899999999998764 34667


Q ss_pred             HHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      .+++++.+ +|+++||+|+.. .+.++++++++|+++
T Consensus       230 ~~~~~~~~-~d~il~~~g~~~~~~~~~~~l~~~g~~v  265 (345)
T cd08287         230 RELTGGVG-ADAVLECVGTQESMEQAIAIARPGGRVG  265 (345)
T ss_pred             HHhcCCCC-CCEEEECCCCHHHHHHHHHhhccCCEEE
Confidence            77777665 999999998754 499999999999984

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=8.7e-30  Score=231.88  Aligned_cols=219  Identities=21%  Similarity=0.286  Sum_probs=184.4

Q ss_pred             eEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCC------CCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEec
Q 023007           63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY------PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPS  136 (288)
Q Consensus        63 ~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~  136 (288)
                      +++++.|.|++.+++|+|++.++++|++|...+.+..      +...++|.++|||++|+|+++|+++++|++||+|++.
T Consensus        39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~  118 (384)
T cd08265          39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE  118 (384)
T ss_pred             EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence            8999999999999999999999999999998876321      2223567899999999999999999999999999862


Q ss_pred             C--------------------------CCCcccceEEEeeCCcEEEcCCCC-------ChhhhcccccchHHHHHHHHhh
Q 023007          137 P--------------------------PSSGTWQSYVVKDQSVWHKVSKDS-------PMEYAATIIVNPLTALRMLEDF  183 (288)
Q Consensus       137 ~--------------------------~~~G~~a~~~~~~~~~l~~ip~~~-------~~~~aa~l~~~~~ta~~~l~~~  183 (288)
                      +                          ...|+|++|+.++.+.++++|+++       +.. ++.++.++++||+++...
T Consensus       119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~  197 (384)
T cd08265         119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR  197 (384)
T ss_pred             CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence            1                          115899999999999999999863       444 556667889999998766


Q ss_pred             -cCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc----ccHHHHHHHhc
Q 023007          184 -TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQ----LEVKNVKGLLA  257 (288)
Q Consensus       184 -~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~----~~~~~i~~~~~  257 (288)
                       .++++|++|+|+|+ |.+|++++++|+.+|+ +++++.    .++++.+.++++|+++++++++    ...+.+.++++
T Consensus       198 ~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~  272 (384)
T cd08265         198 GGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFE----ISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTK  272 (384)
T ss_pred             cCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcC
Confidence             68999999999965 9999999999999999 577776    4677888989999999998763    33467888888


Q ss_pred             CCCCccEEEECCCcc--cHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGGN--SASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~~--~~~~a~~~l~~~G~~v  288 (288)
                      +.+ +|+|+||.|+.  ....++++|+++|+|+
T Consensus       273 g~g-vDvvld~~g~~~~~~~~~~~~l~~~G~~v  304 (384)
T cd08265         273 GWG-ADIQVEAAGAPPATIPQMEKSIAINGKIV  304 (384)
T ss_pred             CCC-CCEEEECCCCcHHHHHHHHHHHHcCCEEE
Confidence            776 99999999974  4488999999999985

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.97  E-value=7e-30  Score=228.55  Aligned_cols=225  Identities=22%  Similarity=0.242  Sum_probs=192.0

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~  128 (288)
                      |+++.+.+++   .+++++++.|++.++|++||+.++++|+.|++.+.|.... ..+|.++|||++|+|+++|+++++|+
T Consensus         1 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~   76 (337)
T cd05283           1 KGYAARDASG---KLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFK   76 (337)
T ss_pred             CceEEecCCC---CceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccC
Confidence            4577777774   3899999999999999999999999999999998886543 35688999999999999999999999


Q ss_pred             CCCEEEecC----------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchH
Q 023007          129 PGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL  174 (288)
Q Consensus       129 ~Gd~V~~~~----------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~  174 (288)
                      +||+|+..+                                  ...|++++|+.++.+.++++|+++++.+++.+.+.+.
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~  156 (337)
T cd05283          77 VGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGI  156 (337)
T ss_pred             CCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHH
Confidence            999997310                                  2258999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~  254 (288)
                      +||+++.+ ..+++|++++|.|+ |.+|++++++++.+|++++.+.    .++++.++++++|++.+++.+....  ...
T Consensus       157 ta~~~~~~-~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~vi~~~~~~~--~~~  228 (337)
T cd05283         157 TVYSPLKR-NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFS----RSPSKKEDALKLGADEFIATKDPEA--MKK  228 (337)
T ss_pred             HHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHcCCcEEecCcchhh--hhh
Confidence            99999876 45899999999875 9999999999999999998887    5778888889999999988765321  122


Q ss_pred             HhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      .  +. ++|++|||+|... ...++++++++|+++
T Consensus       229 ~--~~-~~d~v~~~~g~~~~~~~~~~~l~~~G~~v  260 (337)
T cd05283         229 A--AG-SLDLIIDTVSASHDLDPYLSLLKPGGTLV  260 (337)
T ss_pred             c--cC-CceEEEECCCCcchHHHHHHHhcCCCEEE
Confidence            1  22 4999999999886 589999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.97  E-value=8.6e-30  Score=226.96  Aligned_cols=224  Identities=27%  Similarity=0.356  Sum_probs=191.9

Q ss_pred             ceEEEEccCCCCC-cceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPD-SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~-~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||++++.+++.+. +.+++++.+.|.+.++||+||+.++++|+.|...+.|..+. ...|.++|||++|+|+++|+++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~   79 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR   79 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence            6889998877431 23778888888899999999999999999999988886554 245789999999999999999999


Q ss_pred             CCCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007          127 LAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (288)
Q Consensus       127 ~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~  179 (288)
                      |++||+|++.+.                           ..|+|++|+.++.+.++++|+++++.+++.++.++.+||++
T Consensus        80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~  159 (329)
T cd08298          80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA  159 (329)
T ss_pred             CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence            999999986310                           14899999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCC
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL  259 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~  259 (288)
                      + ..++++++++++|+|+ |++|++++++++..|++++.++    .++++.+.++++|++.+++.+..         .+.
T Consensus       160 ~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~---------~~~  224 (329)
T cd08298         160 L-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFT----RSGEHQELARELGADWAGDSDDL---------PPE  224 (329)
T ss_pred             H-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEc----CChHHHHHHHHhCCcEEeccCcc---------CCC
Confidence            9 7799999999999985 9999999999999999999888    56788888899999888876542         123


Q ss_pred             CCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      + +|++++|.+... .+.++++++++|+|+
T Consensus       225 ~-vD~vi~~~~~~~~~~~~~~~l~~~G~~v  253 (329)
T cd08298         225 P-LDAAIIFAPVGALVPAALRAVKKGGRVV  253 (329)
T ss_pred             c-ccEEEEcCCcHHHHHHHHHHhhcCCEEE
Confidence            3 999999876544 499999999999985

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.97  E-value=1.9e-29  Score=227.05  Aligned_cols=233  Identities=26%  Similarity=0.318  Sum_probs=187.6

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCC-CCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC-C
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT-R  126 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~-~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~-~  126 (288)
                      |++++.+++++.. ++..+.|.|+ +.+++|+|++.++++|++|...+.+........|.++|+|++|+|+++|++++ +
T Consensus         2 ~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (352)
T cd08247           2 KALTFKNNTSPLT-ITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE   80 (352)
T ss_pred             ceEEEecCCCcce-eeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence            6788888887632 4445555554 48999999999999999998877542221112367899999999999999998 8


Q ss_pred             CCCCCEEEecCC----CCcccceEEEeeCC----cEEEcCCCCChhhhcccccchHHHHHHHHhhc-CCCCCCeEEEeCC
Q 023007          127 LAPGDWVIPSPP----SSGTWQSYVVKDQS----VWHKVSKDSPMEYAATIIVNPLTALRMLEDFT-TLNSGDSIVQNGA  197 (288)
Q Consensus       127 ~~~Gd~V~~~~~----~~G~~a~~~~~~~~----~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~g~  197 (288)
                      |++||+|+++..    ..|+|++|++++..    .++++|+++++.+++.++.++.|||+++.... ++++|++|+|+|+
T Consensus        81 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga  160 (352)
T cd08247          81 WKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGG  160 (352)
T ss_pred             CCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECC
Confidence            999999998752    15899999999987    78999999999999999999999999998877 8999999999999


Q ss_pred             CChHHHHHHHHHHHc-CC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc----HHHHHHHhc-CCCCccEEEECCC
Q 023007          198 TSIVGQCIIQIARHR-GI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLLA-NLPEPALGFNCVG  270 (288)
Q Consensus       198 ~g~vG~~a~~la~~~-g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~i~~~~~-~~g~~D~v~d~~g  270 (288)
                      ++++|++++++|+.+ +. .++.+.     ++++.+.++++|+++++++++..    ...+.+.+. +.+ +|++|||+|
T Consensus       161 ~~~vg~~~~~~a~~~~~~~~v~~~~-----~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~d~vl~~~g  234 (352)
T cd08247         161 STSVGRFAIQLAKNHYNIGTVVGTC-----SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGK-FDLILDCVG  234 (352)
T ss_pred             CchHHHHHHHHHHhcCCcceEEEEe-----ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCC-ceEEEECCC
Confidence            999999999999987 45 455554     34445577899999999876533    345445443 444 999999999


Q ss_pred             cc-cHHHHHhhcc---CCCeeC
Q 023007          271 GN-SASKVLKFLR---FREEQW  288 (288)
Q Consensus       271 ~~-~~~~a~~~l~---~~G~~v  288 (288)
                      +. ....++++++   ++|+||
T Consensus       235 ~~~~~~~~~~~l~~~~~~G~~v  256 (352)
T cd08247         235 GYDLFPHINSILKPKSKNGHYV  256 (352)
T ss_pred             CHHHHHHHHHHhCccCCCCEEE
Confidence            84 4588899999   999875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=2.5e-29  Score=222.46  Aligned_cols=234  Identities=26%  Similarity=0.341  Sum_probs=201.3

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      |+++.+..++.+. .+.+++.+.+.+.+++++|++.++++|+.|.....+.+.....+|.++|||++|+|+.+|+++.++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~   79 (325)
T TIGR02824         1 MKAIEITEPGGPE-VLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRW   79 (325)
T ss_pred             CceEEEccCCCcc-cceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCC
Confidence            5788887766543 366777777778999999999999999999988877554433457899999999999999999999


Q ss_pred             CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHH
Q 023007          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (288)
Q Consensus       128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~  207 (288)
                      ++||+|+++.. .|++++|+.++...++++|+++++.+++.++.++.++|+++.....+++|++++|+|++|++|+++++
T Consensus        80 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~  158 (325)
T TIGR02824        80 KVGDRVCALVA-GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQ  158 (325)
T ss_pred             CCCCEEEEccC-CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHH
Confidence            99999998753 37999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCe
Q 023007          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREE  286 (288)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~  286 (288)
                      +++.+|++++.+.    .++++.+.++++|.+.+++.... ..+.+..+.++.+ +|+++||+|+.....++++++++|+
T Consensus       159 ~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~l~~~g~  233 (325)
T TIGR02824       159 LAKAFGARVFTTA----GSDEKCAACEALGADIAINYREEDFVEVVKAETGGKG-VDVILDIVGGSYLNRNIKALALDGR  233 (325)
T ss_pred             HHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCC-eEEEEECCchHHHHHHHHhhccCcE
Confidence            9999999999888    56778888888998888876543 3456666666555 9999999998777889999999999


Q ss_pred             eC
Q 023007          287 QW  288 (288)
Q Consensus       287 ~v  288 (288)
                      ++
T Consensus       234 ~v  235 (325)
T TIGR02824       234 IV  235 (325)
T ss_pred             EE
Confidence            85

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05281 TDH Threonine dehydrogenase

Probab=99.97  E-value=1.9e-29  Score=226.11  Aligned_cols=229  Identities=29%  Similarity=0.314  Sum_probs=188.8

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCC--CCCCCCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      ||++.++..+.   .+.+.+.+.|.+.++|++||+.++++|+.|...+.+..  ......|..+|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~   77 (341)
T cd05281           1 MKAIVKTKAGP---GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT   77 (341)
T ss_pred             CcceEEecCCC---ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence            68888887764   38899999999999999999999999999988765421  11123467899999999999999999


Q ss_pred             CCCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007          126 RLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (288)
Q Consensus       126 ~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~  179 (288)
                      ++++||+|+++..                          ..|+|++|++++.+.++++|++++.+. ++++.++.+++++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~~  156 (341)
T cd05281          78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNAVHT  156 (341)
T ss_pred             CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHHHHH
Confidence            9999999998521                          248999999999999999999999854 4666678888887


Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcC
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN  258 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~  258 (288)
                      +.  ...++|++|+|.|+ |++|++++++++.+|+ +++++.    .++++.+.++++|.+++++++......+.+++++
T Consensus       157 ~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  229 (341)
T cd05281         157 VL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASD----PNPYRLELAKKMGADVVINPREEDVVEVKSVTDG  229 (341)
T ss_pred             HH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCcceeeCcccccHHHHHHHcCC
Confidence            65  45678999999876 9999999999999999 577774    5788888889999999988765432267777776


Q ss_pred             CCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      .+ +|++|||+|+... ..++++|+++|+|+
T Consensus       230 ~~-vd~vld~~g~~~~~~~~~~~l~~~G~~v  259 (341)
T cd05281         230 TG-VDVVLEMSGNPKAIEQGLKALTPGGRVS  259 (341)
T ss_pred             CC-CCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence            65 9999999987654 88999999999975

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.97  E-value=1.5e-29  Score=226.36  Aligned_cols=223  Identities=25%  Similarity=0.329  Sum_probs=182.0

Q ss_pred             EEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHh-CCCCC-CCCCCcccccceEEEEEEecCCCCCCCC
Q 023007           52 VYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE-GVYPV-RPKVPAVGGYEGVGEVYSVGSAVTRLAP  129 (288)
Q Consensus        52 ~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~  129 (288)
                      ++++.+.    +.+++.+.|.+.++||+||+.++++|+.|...+. +.... ....|.++|+|++|+|+++|+++++|++
T Consensus         2 ~~~~~~~----~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~   77 (339)
T cd08232           2 VIHAAGD----LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAP   77 (339)
T ss_pred             eeccCCc----eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCC
Confidence            3455544    8999999999999999999999999999988764 32211 1134678999999999999999999999


Q ss_pred             CCEEEecC-------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHH
Q 023007          130 GDWVIPSP-------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR  178 (288)
Q Consensus       130 Gd~V~~~~-------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~  178 (288)
                      ||+|++.+                               ...|+|++|+.++.+.++++|+++++.+++. ..++.++|+
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~  156 (339)
T cd08232          78 GQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALH  156 (339)
T ss_pred             CCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHH
Confidence            99998731                               1248999999999999999999999999876 568889999


Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhc
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~  257 (288)
                      ++.+.... +|++|||.|+ |.+|++++++|+.+|+ +++++.    .++++.+.++++|.+++++++...   +..+..
T Consensus       157 ~l~~~~~~-~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~----~s~~~~~~~~~~g~~~vi~~~~~~---~~~~~~  227 (339)
T cd08232         157 AVNRAGDL-AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATD----LADAPLAVARAMGADETVNLARDP---LAAYAA  227 (339)
T ss_pred             HHHhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHcCCCEEEcCCchh---hhhhhc
Confidence            99876666 9999999875 9999999999999999 677776    467888888999999999887643   223332


Q ss_pred             CCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      +.+++|++|||.|+. ..+.++++|+++|+|+
T Consensus       228 ~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v  259 (339)
T cd08232         228 DKGDFDVVFEASGAPAALASALRVVRPGGTVV  259 (339)
T ss_pred             cCCCccEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            222499999999964 4589999999999985

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.97  E-value=3e-29  Score=223.29  Aligned_cols=229  Identities=24%  Similarity=0.279  Sum_probs=190.3

Q ss_pred             ceEEEEccCCC---CCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCC--CCCCcccccceEEEEEEecC
Q 023007           48 SKAVVYEREGP---PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR--PKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        48 ~~a~~~~~~g~---~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~~G~  122 (288)
                      +++|.+.+.++   +.+.+++++.+.|++.+++|+||+.++++|+.|.....+.....  ...+..+|+|++|+|+++|.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            46777776553   33568999999999999999999999999998876555432111  11245789999999999996


Q ss_pred             CCCCCCCCCEEEecCCCCcccceEEEeeC-CcEEEcCCCCC--hhhhcc-cccchHHHHHHHHhhcCCCCCCeEEEeCCC
Q 023007          123 AVTRLAPGDWVIPSPPSSGTWQSYVVKDQ-SVWHKVSKDSP--MEYAAT-IIVNPLTALRMLEDFTTLNSGDSIVQNGAT  198 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~-~~l~~ip~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  198 (288)
                      +  +|++||+|+++    ++|++|+.++. +.++++|++++  +.+++. ++.++.+||+++.....+.+|++|+|+|++
T Consensus        82 ~--~~~~Gd~V~~~----~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~  155 (329)
T cd05288          82 P--DFKVGDLVSGF----LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAA  155 (329)
T ss_pred             C--CCCCCCEEecc----cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCc
Confidence            4  79999999975    48999999999 99999999995  555555 888999999999888889999999999998


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHH
Q 023007          199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASK  276 (288)
Q Consensus       199 g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~  276 (288)
                      |.+|++++++++.+|++++.++    .++++.+.+++ +|+++++++++. ..+.+.++++ . ++|++|||+|+...+.
T Consensus       156 g~ig~~~~~~a~~~G~~vi~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~-~~d~vi~~~g~~~~~~  229 (329)
T cd05288         156 GAVGSVVGQIAKLLGARVVGIA----GSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-D-GIDVYFDNVGGEILDA  229 (329)
T ss_pred             chHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-C-CceEEEEcchHHHHHH
Confidence            9999999999999999999988    57888888887 999999988764 3456666664 3 4999999999977799


Q ss_pred             HHhhccCCCeeC
Q 023007          277 VLKFLRFREEQW  288 (288)
Q Consensus       277 a~~~l~~~G~~v  288 (288)
                      ++++++++|+|+
T Consensus       230 ~~~~l~~~G~~v  241 (329)
T cd05288         230 ALTLLNKGGRIA  241 (329)
T ss_pred             HHHhcCCCceEE
Confidence            999999999985

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08251 polyketide_synthase polyketide synthase

Probab=99.97  E-value=2.4e-29  Score=220.52  Aligned_cols=213  Identities=26%  Similarity=0.297  Sum_probs=189.3

Q ss_pred             CCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCC-CCcccceEEE
Q 023007           70 PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP-SSGTWQSYVV  148 (288)
Q Consensus        70 ~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~-~~G~~a~~~~  148 (288)
                      .|++.+++++|++.++++|+.|+..+.+.++....+|.++|+|++|+|+++|+++.+|++||+|+++.. ..|+|++|+.
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~   81 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT   81 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence            466889999999999999999999988766544456889999999999999999999999999998752 3589999999


Q ss_pred             eeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHH
Q 023007          149 KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE  228 (288)
Q Consensus       149 ~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~  228 (288)
                      ++.+.++++|+++++.+++.++.++.+||+++. ...+++|++++|+++++.+|++++++++.+|++++.++    .+++
T Consensus        82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~----~~~~  156 (303)
T cd08251          82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATA----SSDD  156 (303)
T ss_pred             ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEc----CCHH
Confidence            999999999999999999999999999999985 68999999999999999999999999999999999998    5778


Q ss_pred             HHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          229 AKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       229 ~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +.+.++++|.+.+++.... ..+.+..++++.+ +|+++||+++.....++++++++|+|+
T Consensus       157 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~~~~~~~~~~~~~~~l~~~g~~v  216 (303)
T cd08251         157 KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRG-VDVVINTLSGEAIQKGLNCLAPGGRYV  216 (303)
T ss_pred             HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCC-ceEEEECCcHHHHHHHHHHhccCcEEE
Confidence            8888899999999987664 3456777777766 999999998877789999999999975

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.97  E-value=2.8e-29  Score=224.84  Aligned_cols=223  Identities=26%  Similarity=0.255  Sum_probs=183.6

Q ss_pred             ccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC--CCCCCCcccccceEEEEEEecCCCCCCCCCC
Q 023007           54 EREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGD  131 (288)
Q Consensus        54 ~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd  131 (288)
                      ++++.+   +++++.|.|.+.++||+||+.++++|+.|..++.+...  ....+|.++|+|++|+|+++|+++++|++||
T Consensus         5 ~~~~~~---~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   81 (340)
T TIGR00692         5 TKPGYG---AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGD   81 (340)
T ss_pred             ccCCCC---cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCC
Confidence            445554   78899999999999999999999999999987655311  1123466899999999999999999999999


Q ss_pred             EEEecC--------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcC
Q 023007          132 WVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT  185 (288)
Q Consensus       132 ~V~~~~--------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~  185 (288)
                      +|++..                          ...|+|++|++++.+.++++|+++++.++ +++.++.+||+++  ...
T Consensus        82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~  158 (340)
T TIGR00692        82 YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAG  158 (340)
T ss_pred             EEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--Hcc
Confidence            999732                          12589999999999999999999998654 5677888999886  355


Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCcc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPA  263 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D  263 (288)
                      .++|++|+|.|+ |++|.+++++++.+|++ ++++.    .++++.+.++++|++.+++++.. ..+.+.+++++.+ +|
T Consensus       159 ~~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~-~d  232 (340)
T TIGR00692       159 PISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSD----PNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEG-VD  232 (340)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCC-CC
Confidence            789999999775 99999999999999997 66664    57888888999999988887654 3466777777665 99


Q ss_pred             EEEECCCccc-HHHHHhhccCCCeeC
Q 023007          264 LGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       264 ~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +++||+|+.. ....+++|+++|+|+
T Consensus       233 ~vld~~g~~~~~~~~~~~l~~~g~~v  258 (340)
T TIGR00692       233 VFLEMSGAPKALEQGLQAVTPGGRVS  258 (340)
T ss_pred             EEEECCCCHHHHHHHHHhhcCCCEEE
Confidence            9999988754 488899999999985

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=2.7e-29  Score=221.83  Aligned_cols=215  Identities=22%  Similarity=0.221  Sum_probs=182.0

Q ss_pred             eEEEEcCCCCCCCCeEEEEEeEEecChHHHHHH-hCCCCCC-CCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCC
Q 023007           63 IKMIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVYPVR-PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS  140 (288)
Q Consensus        63 ~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~-~g~~~~~-~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~  140 (288)
                      +++++++.|++.++||+|++.++++|+.|...+ .+..... +..|..+|+|++|+|+.+|+++.++++||+|+++.  .
T Consensus         7 ~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~   84 (312)
T cd08269           7 FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS--G   84 (312)
T ss_pred             eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--C
Confidence            889999999999999999999999999999887 6543221 12467899999999999999999999999999875  4


Q ss_pred             cccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEE
Q 023007          141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINI  219 (288)
Q Consensus       141 G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~  219 (288)
                      |+|++|+.++.+.++++|+++  ..++....++.++|+++. ..++++|++|+|+|+ |.+|.+++++|+.+|++ ++++
T Consensus        85 g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~  160 (312)
T cd08269          85 GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAI  160 (312)
T ss_pred             CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Confidence            799999999999999999998  222222267788999887 689999999999975 99999999999999999 8887


Q ss_pred             EcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          220 IRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       220 ~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      .    .++++.+.++++|++++++++.. ..+.+.+++++.+ +|+++||.|+.. ...++++|+++|+|+
T Consensus       161 ~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~-vd~vld~~g~~~~~~~~~~~l~~~g~~~  226 (312)
T cd08269         161 D----RRPARLALARELGATEVVTDDSEAIVERVRELTGGAG-ADVVIEAVGHQWPLDLAGELVAERGRLV  226 (312)
T ss_pred             C----CCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCC-CCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence            7    56788888899999998887643 4567777777766 999999998765 488999999999984

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.97  E-value=1e-28  Score=223.36  Aligned_cols=230  Identities=25%  Similarity=0.264  Sum_probs=181.3

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      |++.++..+..    +++++.+.|.+.++||+||+.++++|++|...+.+....  ....|.++|||++|+|+++|++++
T Consensus        18 ~~~~~~~~~~~----l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
T PLN02702         18 NMAAWLVGVNT----LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK   93 (364)
T ss_pred             cceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCC
Confidence            34444444433    788888888899999999999999999999988763211  112467899999999999999999


Q ss_pred             CCCCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHH
Q 023007          126 RLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR  178 (288)
Q Consensus       126 ~~~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~  178 (288)
                      +|++||+|++.+                           ...|+|++|+.++.+.++++|+++++.+++.. .++.++|+
T Consensus        94 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~  172 (364)
T PLN02702         94 HLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVH  172 (364)
T ss_pred             CCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHH
Confidence            999999998731                           01489999999999999999999999988752 24556888


Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC--c-ccHHHHHHH
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES--Q-LEVKNVKGL  255 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~--~-~~~~~i~~~  255 (288)
                      ++ ...++.+|++|+|+|+ |++|++++++++.+|++++++++   .++++.+.++++|++.++++.  . ...+.+..+
T Consensus       173 ~~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  247 (364)
T PLN02702        173 AC-RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVD---VDDERLSVAKQLGADEIVLVSTNIEDVESEVEEI  247 (364)
T ss_pred             HH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHhCCCEEEecCcccccHHHHHHHH
Confidence            87 5688999999999975 99999999999999998655554   468888888999999887643  2 223444443


Q ss_pred             h--cCCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007          256 L--ANLPEPALGFNCVGG-NSASKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~--~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v  288 (288)
                      +  .+. ++|++|||+|+ .....++++++++|+|+
T Consensus       248 ~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v  282 (364)
T PLN02702        248 QKAMGG-GIDVSFDCVGFNKTMSTALEATRAGGKVC  282 (364)
T ss_pred             hhhcCC-CCCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            2  233 49999999996 44599999999999985

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.97  E-value=5e-29  Score=218.95  Aligned_cols=231  Identities=28%  Similarity=0.393  Sum_probs=196.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC--CCCCCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      |+++++..++... .+.+++.+.|.+.+++|+|++.++++|+.|+..+.+...  .....|..+|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~   79 (309)
T cd05289           1 MKAVRIHEYGGPE-VLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT   79 (309)
T ss_pred             CceEEEcccCCcc-ceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence            6788888776543 266777777788999999999999999999998877542  1224478899999999999999999


Q ss_pred             CCCCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          126 RLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       126 ~~~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      ++++||+|+++..  ..|++++|+.++...++++|+++++..++.++..+.++|+++.....+.+|++|+|+|++|.+|+
T Consensus        80 ~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~  159 (309)
T cd05289          80 GFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGS  159 (309)
T ss_pred             CCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHH
Confidence            9999999998851  14799999999999999999999999999999999999999988788999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccC
Q 023007          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF  283 (288)
Q Consensus       204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~  283 (288)
                      +++++++..|++++.++    .++ +.+.++++|.+++++.+......   .+.+.+ +|+++||+|+.....+++++++
T Consensus       160 ~~~~~a~~~g~~v~~~~----~~~-~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~-~d~v~~~~~~~~~~~~~~~l~~  230 (309)
T cd05289         160 FAVQLAKARGARVIATA----SAA-NADFLRSLGADEVIDYTKGDFER---AAAPGG-VDAVLDTVGGETLARSLALVKP  230 (309)
T ss_pred             HHHHHHHHcCCEEEEEe----cch-hHHHHHHcCCCEEEeCCCCchhh---ccCCCC-ceEEEECCchHHHHHHHHHHhc
Confidence            99999999999999887    344 67778889998888876543322   334444 9999999999977999999999


Q ss_pred             CCeeC
Q 023007          284 REEQW  288 (288)
Q Consensus       284 ~G~~v  288 (288)
                      +|+++
T Consensus       231 ~g~~v  235 (309)
T cd05289         231 GGRLV  235 (309)
T ss_pred             CcEEE
Confidence            99985

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.97  E-value=1.1e-28  Score=219.83  Aligned_cols=225  Identities=27%  Similarity=0.313  Sum_probs=191.2

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~  128 (288)
                      |++++.++|..   +++++.|.|.+.+++++|++.++++|+.|...+.+.... ..+|.++|||++|+|+.+|+++++|+
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~   76 (330)
T cd08245           1 KAAVVHAAGGP---LEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRK   76 (330)
T ss_pred             CeEEEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCcccc
Confidence            57888877542   889999999999999999999999999999988876543 24578899999999999999999999


Q ss_pred             CCCEEEecC--------------------------C-CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          129 PGDWVIPSP--------------------------P-SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       129 ~Gd~V~~~~--------------------------~-~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      +||+|+..+                          . ..|++++|+.++.++++++|+++++.+++.++..+.+||+++.
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~  156 (330)
T cd08245          77 VGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR  156 (330)
T ss_pred             cCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            999998421                          0 2589999999999999999999999999999999999999987


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      . .+++++++|+|+|+ |.+|++++++|+.+|++++.++    .++++.++++++|++.+++.+....  ... ..+  +
T Consensus       157 ~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~~~--~  225 (330)
T cd08245         157 D-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAIT----RSPDKRELARKLGADEVVDSGAELD--EQA-AAG--G  225 (330)
T ss_pred             h-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhCCcEEeccCCcch--HHh-ccC--C
Confidence            6 78999999999976 7799999999999999999988    5788889999999998887665432  111 222  4


Q ss_pred             ccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          262 PALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       262 ~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +|+++||+++.. ...++++++++|+++
T Consensus       226 ~d~vi~~~~~~~~~~~~~~~l~~~G~~i  253 (330)
T cd08245         226 ADVILVTVVSGAAAEAALGGLRRGGRIV  253 (330)
T ss_pred             CCEEEECCCcHHHHHHHHHhcccCCEEE
Confidence            999999988644 489999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=9.1e-29  Score=213.50  Aligned_cols=205  Identities=30%  Similarity=0.388  Sum_probs=178.7

Q ss_pred             eEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCC------------------
Q 023007           77 DVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP------------------  138 (288)
Q Consensus        77 evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~------------------  138 (288)
                      ||+|++.++++|+.|...+.+..+.....|.++|+|++|+|+++|+++++|++||+|+++..                  
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~   80 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI   80 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence            68999999999999999988876533355789999999999999999999999999999763                  


Q ss_pred             ----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC
Q 023007          139 ----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI  214 (288)
Q Consensus       139 ----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~  214 (288)
                          ..|++++|+.++.+.++++|+++++.+++.++.++.+||+++.....+.+|++|+|+|+++ +|++++++++..|.
T Consensus        81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~  159 (271)
T cd05188          81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA  159 (271)
T ss_pred             eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence                1589999999999999999999999999999999999999998888789999999999966 99999999999999


Q ss_pred             eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007          215 HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGG-NSASKVLKFLRFREEQW  288 (288)
Q Consensus       215 ~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v  288 (288)
                      ++++++    .++++.+.++++|.++++++.... .+.+. .+.+.+ +|++|||+++ ...+.++++++++|+++
T Consensus       160 ~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~-~d~vi~~~~~~~~~~~~~~~l~~~G~~v  229 (271)
T cd05188         160 RVIVTD----RSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGG-ADVVIDAVGGPETLAQALRLLRPGGRIV  229 (271)
T ss_pred             eEEEEc----CCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCC-CCEEEECCCCHHHHHHHHHhcccCCEEE
Confidence            999998    577888889999998888876543 33444 444444 9999999998 56699999999999985

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=3.5e-28  Score=214.72  Aligned_cols=233  Identities=29%  Similarity=0.358  Sum_probs=199.4

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCC-CCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVK-ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~-~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      |+++++..++... .+++.+.+ |.+. +++++|++.++++|+.|...+.+........|..+|||++|+|+.+|+++.+
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~   78 (323)
T cd08241           1 MKAVVCKELGGPE-DLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTG   78 (323)
T ss_pred             CeEEEEecCCCcc-eeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCC
Confidence            5788887655543 37777777 6665 4999999999999999998887765433344668999999999999999999


Q ss_pred             CCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHH
Q 023007          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII  206 (288)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~  206 (288)
                      +++||+|+++.. .|++++|+.++.+.++++|+++++.+++.+..++.+||+++.....+++|++|+|+|++|++|++++
T Consensus        79 ~~~G~~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~  157 (323)
T cd08241          79 FKVGDRVVALTG-QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAV  157 (323)
T ss_pred             CCCCCEEEEecC-CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Confidence            999999999862 4799999999999999999999999999899899999999987889999999999999999999999


Q ss_pred             HHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCC
Q 023007          207 QIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFRE  285 (288)
Q Consensus       207 ~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G  285 (288)
                      ++++..|++++.++    .++++.+.++++|.+.+++.+.. ..+.+...+++.+ +|+++||.|+...+.++++++++|
T Consensus       158 ~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~-~d~v~~~~g~~~~~~~~~~~~~~g  232 (323)
T cd08241         158 QLAKALGARVIAAA----SSEEKLALARALGADHVIDYRDPDLRERVKALTGGRG-VDVVYDPVGGDVFEASLRSLAWGG  232 (323)
T ss_pred             HHHHHhCCEEEEEe----CCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCC-cEEEEECccHHHHHHHHHhhccCC
Confidence            99999999999988    57788888888998888887654 3456777777655 999999999877789999999999


Q ss_pred             eeC
Q 023007          286 EQW  288 (288)
Q Consensus       286 ~~v  288 (288)
                      +++
T Consensus       233 ~~v  235 (323)
T cd08241         233 RLL  235 (323)
T ss_pred             EEE
Confidence            874

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=5.4e-28  Score=215.36  Aligned_cols=232  Identities=25%  Similarity=0.313  Sum_probs=193.6

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~  128 (288)
                      |++.+...+... .+.+++.+.|.+.+++++|++.++++|+.|...+.+.....+..|..+|||++|+|+.+|+++.+++
T Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   79 (337)
T cd08275           1 RAVVLTGFGGLD-KLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFK   79 (337)
T ss_pred             CeEEEcCCCCcc-ceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCC
Confidence            356666555432 3778888877889999999999999999999988876544334577899999999999999999999


Q ss_pred             CCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHH
Q 023007          129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI  208 (288)
Q Consensus       129 ~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~l  208 (288)
                      +||+|+++.. .|++++|+.++.+.++++|+++++.+++.++.++.++|+++....++++|++|+|+|++|++|++++++
T Consensus        80 ~G~~V~~~~~-~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~  158 (337)
T cd08275          80 VGDRVMGLTR-FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQL  158 (337)
T ss_pred             CCCEEEEecC-CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHH
Confidence            9999999864 479999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCee
Q 023007          209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQ  287 (288)
Q Consensus       209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~  287 (288)
                      ++.+  .++.+++.  ..+++.+.++.+|.+.+++.+... .+.+...++ . ++|+++||+|+.....++++++++|++
T Consensus       159 a~~~--~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~d~v~~~~g~~~~~~~~~~l~~~g~~  232 (337)
T cd08275         159 CKTV--PNVTVVGT--ASASKHEALKENGVTHVIDYRTQDYVEEVKKISP-E-GVDIVLDALGGEDTRKSYDLLKPMGRL  232 (337)
T ss_pred             HHHc--cCcEEEEe--CCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-C-CceEEEECCcHHHHHHHHHhhccCcEE
Confidence            9998  22333322  245677888889999888877543 456666664 3 499999999998778999999999997


Q ss_pred             C
Q 023007          288 W  288 (288)
Q Consensus       288 v  288 (288)
                      +
T Consensus       233 v  233 (337)
T cd08275         233 V  233 (337)
T ss_pred             E
Confidence            5

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=2.7e-28  Score=215.73  Aligned_cols=227  Identities=30%  Similarity=0.383  Sum_probs=187.1

Q ss_pred             ccCCCCCcc-eEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccceEEEEEEecCCCCCCCCC
Q 023007           54 EREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVTRLAPG  130 (288)
Q Consensus        54 ~~~g~~~~~-~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~~~~~~~G  130 (288)
                      +..+++.+. +++++.+.|.+.+++|+|++.++++|+.|...+.|..+.  ....|..+|||++|+|.++|+++.++++|
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~G   83 (319)
T cd08267           4 TRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVG   83 (319)
T ss_pred             CCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCC
Confidence            344444433 277888888899999999999999999999988775421  11236789999999999999999999999


Q ss_pred             CEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHH
Q 023007          131 DWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI  208 (288)
Q Consensus       131 d~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~l  208 (288)
                      |+|+++..  ..|++++|+.++.+.++++|+++++.+++.++.++.+||+++....++++|++|+|+|++|++|++++++
T Consensus        84 d~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~l  163 (319)
T cd08267          84 DEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQI  163 (319)
T ss_pred             CEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence            99998753  2489999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             HHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH--HHHHhhccCCCe
Q 023007          209 ARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA--SKVLKFLRFREE  286 (288)
Q Consensus       209 a~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~  286 (288)
                      ++.+|++++.++    .+ ++.+.++++|.+++++.+.....  ...+.+.+ +|+++||+|+...  ...+..++++|+
T Consensus       164 a~~~g~~v~~~~----~~-~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~-~d~vi~~~~~~~~~~~~~~~~l~~~g~  235 (319)
T cd08267         164 AKALGAHVTGVC----ST-RNAELVRSLGADEVIDYTTEDFV--ALTAGGEK-YDVIFDAVGNSPFSLYRASLALKPGGR  235 (319)
T ss_pred             HHHcCCEEEEEe----CH-HHHHHHHHcCCCEeecCCCCCcc--hhccCCCC-CcEEEECCCchHHHHHHhhhccCCCCE
Confidence            999999999887    33 77788899999888887654322  34455544 9999999996432  444445999998


Q ss_pred             eC
Q 023007          287 QW  288 (288)
Q Consensus       287 ~v  288 (288)
                      ++
T Consensus       236 ~i  237 (319)
T cd08267         236 YV  237 (319)
T ss_pred             EE
Confidence            74

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.96  E-value=3.2e-28  Score=212.47  Aligned_cols=173  Identities=23%  Similarity=0.199  Sum_probs=149.4

Q ss_pred             ccccceEEEEEEecCCCC------CCCCCCEEEecCC---------------------------------CCcccceEEE
Q 023007          108 VGGYEGVGEVYSVGSAVT------RLAPGDWVIPSPP---------------------------------SSGTWQSYVV  148 (288)
Q Consensus       108 ~~G~e~~G~V~~~G~~~~------~~~~Gd~V~~~~~---------------------------------~~G~~a~~~~  148 (288)
                      ++|||++|+|+++|++++      +|++||||+..+.                                 .+|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            589999999999999998      8999999976431                                 1389999999


Q ss_pred             eeCC-cEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCC
Q 023007          149 KDQS-VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGS  226 (288)
Q Consensus       149 ~~~~-~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~  226 (288)
                      +|+. .++++|+++++++++.+++.+.|+|+++.+ ....+|++|+|+|+ |++|++++|+|+.+|++ ++++.    .+
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~----~~  154 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAAD----PS  154 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CC
Confidence            9997 799999999999999999889999999876 45669999999988 99999999999999997 66664    57


Q ss_pred             HHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          227 DEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       227 ~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +++.+.++++|++.++++... .+.+.+++++.+ +|++|||+|.+.. +.++++++++|+++
T Consensus       155 ~~r~~~a~~~Ga~~~i~~~~~-~~~~~~~~~~~g-~d~vid~~G~~~~~~~~~~~l~~~G~iv  215 (280)
T TIGR03366       155 PDRRELALSFGATALAEPEVL-AERQGGLQNGRG-VDVALEFSGATAAVRACLESLDVGGTAV  215 (280)
T ss_pred             HHHHHHHHHcCCcEecCchhh-HHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhcCCCEEE
Confidence            889999999999999887543 355666777665 9999999998764 89999999999985

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.96  E-value=1.2e-27  Score=207.85  Aligned_cols=203  Identities=30%  Similarity=0.350  Sum_probs=180.9

Q ss_pred             CeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEE
Q 023007           76 NDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH  155 (288)
Q Consensus        76 ~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~  155 (288)
                      +||+||+.++++|+.|+....+...   ..|.++|||++|+|+++|+++.+|++||+|+++.  .|+|++|+.++.+.++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~--~g~~~~~~~~~~~~~~   75 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA--PGAFATHVRVDARLVV   75 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe--cCcccceEEechhheE
Confidence            4799999999999999998877542   3478999999999999999999999999999875  4799999999999999


Q ss_pred             EcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh
Q 023007          156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG  235 (288)
Q Consensus       156 ~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~  235 (288)
                      ++|+++++.+++.++.++.++|+++.+..++++|++|+|+|++|++|++++++++.+|++++.++    .++++.+.+++
T Consensus        76 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~  151 (293)
T cd05195          76 KIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATV----GSEEKREFLRE  151 (293)
T ss_pred             eCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHH
Confidence            99999999999999999999999998888999999999999889999999999999999999998    57788888888


Q ss_pred             CC--CCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          236 LG--ADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       236 ~g--~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      ++  ++.+++++.. ..+.+.+++.+.+ +|+++||+|+...+.++++++++|+++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v  206 (293)
T cd05195         152 LGGPVDHIFSSRDLSFADGILRATGGRG-VDVVLNSLSGELLRASWRCLAPFGRFV  206 (293)
T ss_pred             hCCCcceEeecCchhHHHHHHHHhCCCC-ceEEEeCCCchHHHHHHHhcccCceEE
Confidence            88  6788887653 3466777777766 999999999987799999999999874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.95  E-value=1.1e-26  Score=201.67  Aligned_cols=198  Identities=31%  Similarity=0.367  Sum_probs=176.1

Q ss_pred             EEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCC
Q 023007           80 VKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK  159 (288)
Q Consensus        80 I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~  159 (288)
                      ||+.++++|+.|+..+.|.++.    |.++|||++|+|+++|+++++|++||+|+++.  .|+|++|+.++.+.++++|+
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~~----~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~--~g~~~~~~~~~~~~~~~~p~   75 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLPG----EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA--PGSFATYVRTDARLVVPIPD   75 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCCC----CCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc--CCceeeEEEccHHHeEECCC
Confidence            7899999999999988776432    57899999999999999999999999999885  47999999999999999999


Q ss_pred             CCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC-
Q 023007          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-  238 (288)
Q Consensus       160 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~-  238 (288)
                      ++++.+++.+++++.++|+++.....+.+|++|+|+|++|.+|++++++++.+|++++.++    .++++.+.++++|. 
T Consensus        76 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~----~~~~~~~~~~~~g~~  151 (288)
T smart00829       76 GLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATA----GSPEKRDFLRELGIP  151 (288)
T ss_pred             CCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCC
Confidence            9999999999999999999997888999999999999889999999999999999999888    57888888999998 


Q ss_pred             -CEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          239 -DEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       239 -~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                       +.+++++.. ..+.+.+++++.+ +|+++||+|+.....++++++++|+|+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~~~~~~~~~~~~l~~~g~~v  202 (288)
T smart00829      152 DDHIFSSRDLSFADEILRATGGRG-VDVVLNSLAGEFLDASLRCLAPGGRFV  202 (288)
T ss_pred             hhheeeCCCccHHHHHHHHhCCCC-cEEEEeCCCHHHHHHHHHhccCCcEEE
Confidence             778877654 3456777777665 999999999876788999999999875

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.94  E-value=6.3e-25  Score=184.29  Aligned_cols=206  Identities=24%  Similarity=0.304  Sum_probs=167.9

Q ss_pred             CCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccc----cceEEEEEEecCCCCCCCCCCEEEecCCCCcccceE
Q 023007           71 VEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGG----YEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY  146 (288)
Q Consensus        71 p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G----~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~  146 (288)
                      .++..++|+||..|.+.+|..+..+....+...-.|..+|    ..++|+|++  ++.+++++||.|.+..    +|.+|
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~----gWeey  106 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV----GWEEY  106 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec----cceEE
Confidence            3478899999999999999988777654443222334443    367899988  6788999999999885    89999


Q ss_pred             EEeeCCcE--EEcCC--CCChhh-hcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          147 VVKDQSVW--HKVSK--DSPMEY-AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       147 ~~~~~~~l--~~ip~--~~~~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++....  .+++.  +.++.. ...+.++.+|||-++++++.+++|+||+|.||+|++|+.+.|+|+.+|++|+.++ 
T Consensus       107 sii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsa-  185 (343)
T KOG1196|consen  107 SVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSA-  185 (343)
T ss_pred             EEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEec-
Confidence            99987543  44443  344333 4566778899999999999999999999999999999999999999999999999 


Q ss_pred             CCCCCHHHHHHHH-hCCCCEEEeCCcc-cHH-HHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          222 DRAGSDEAKEKLK-GLGADEVFTESQL-EVK-NVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       222 ~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~-~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                         .+.++.+.++ ++|.|..+||.++ +++ .+++.... | +|+.||++|+..++..+..|+..||+.
T Consensus       186 ---GS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~-G-IDiYfeNVGG~~lDavl~nM~~~gri~  250 (343)
T KOG1196|consen  186 ---GSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPE-G-IDIYFENVGGKMLDAVLLNMNLHGRIA  250 (343)
T ss_pred             ---CChhhhhhhHhccCCccceeccCccCHHHHHHHhCCC-c-ceEEEeccCcHHHHHHHHhhhhccceE
Confidence               6899999886 6899999999887 554 45554443 4 999999999999999999999999873

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.91  E-value=3.5e-24  Score=204.33  Aligned_cols=211  Identities=21%  Similarity=0.190  Sum_probs=185.3

Q ss_pred             ceEEEEcCCC---CCCCCeEEEEEeEEecChHHHHHHhCCCCCCC------CCCcccccceEEEEEEecCCCCCCCCCCE
Q 023007           62 VIKMIELPPV---EVKENDVCVKMLAAPINPSDINRIEGVYPVRP------KVPAVGGYEGVGEVYSVGSAVTRLAPGDW  132 (288)
Q Consensus        62 ~~~~~~~~~p---~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~  132 (288)
                      .++|.+-|..   +..++.-+-.|.|+.+|++|+.+..|..+.+.      ...+.+|-||+|+          .+-|.|
T Consensus      1428 SlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrR 1497 (2376)
T KOG1202|consen 1428 SLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRR 1497 (2376)
T ss_pred             ceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcE
Confidence            3788888743   35666668889999999999999998765442      2237789999998          467999


Q ss_pred             EEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc
Q 023007          133 VIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR  212 (288)
Q Consensus       133 V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~  212 (288)
                      |+++.+. -++++.+.++.+++|.+|+++.+++|++.|+.|.|+||+|..++.+++|+++||++++|++|++||.+|.+.
T Consensus      1498 vM~mvpA-ksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~ 1576 (2376)
T KOG1202|consen 1498 VMGMVPA-KSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAH 1576 (2376)
T ss_pred             EEEeeeh-hhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHc
Confidence            9998873 788999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccH-HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCee
Q 023007          213 GIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQ  287 (288)
Q Consensus       213 g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~  287 (288)
                      |++|+.++    .+.+|++++.    ++...++-|+++.++ +-+...|+|+| +|+|+|....+.++.+++||+..|||
T Consensus      1577 G~~VFTTV----GSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrG-VdlVLNSLaeEkLQASiRCLa~~GRF 1651 (2376)
T KOG1202|consen 1577 GCTVFTTV----GSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRG-VDLVLNSLAEEKLQASIRCLALHGRF 1651 (2376)
T ss_pred             CCEEEEec----CcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCC-eeeehhhhhHHHHHHHHHHHHhcCee
Confidence            99999999    6889998885    566778888888765 45788899998 99999999999999999999999998


Q ss_pred             C
Q 023007          288 W  288 (288)
Q Consensus       288 v  288 (288)
                      .
T Consensus      1652 L 1652 (2376)
T KOG1202|consen 1652 L 1652 (2376)
T ss_pred             e
Confidence            4

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.90  E-value=1.5e-22  Score=176.02  Aligned_cols=166  Identities=26%  Similarity=0.316  Sum_probs=142.5

Q ss_pred             CCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhh
Q 023007          104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF  183 (288)
Q Consensus       104 ~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~  183 (288)
                      .+|.++|||++|+|+++|+++++|++||+|+++.    .|++|+.++.+.++++|+++++.+++.+ .++++||+++. .
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~----~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~   92 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG----PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVR-D   92 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC----CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-h
Confidence            4689999999999999999999999999999863    6899999999999999999999998888 78999999986 5


Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCC-CCEEEeCCcccHHHHHHHhcCCCC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLG-ADEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      +++++|++++|+|+ |.+|++++++|+.+|++ ++++.    .++++.+.++++| .+.+++...       ..+.+.+ 
T Consensus        93 ~~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~----~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~-  159 (277)
T cd08255          93 AEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVD----PDAARRELAEALGPADPVAADTA-------DEIGGRG-  159 (277)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEC----CCHHHHHHHHHcCCCccccccch-------hhhcCCC-
Confidence            89999999999975 99999999999999999 88876    5788888889999 565554432       1223434 


Q ss_pred             ccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          262 PALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       262 ~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +|++|||++... ...++++++++|+++
T Consensus       160 ~d~vl~~~~~~~~~~~~~~~l~~~g~~~  187 (277)
T cd08255         160 ADVVIEASGSPSALETALRLLRDRGRVV  187 (277)
T ss_pred             CCEEEEccCChHHHHHHHHHhcCCcEEE
Confidence            999999988654 489999999999984

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.74  E-value=9.7e-18  Score=125.52  Aligned_cols=83  Identities=41%  Similarity=0.516  Sum_probs=71.6

Q ss_pred             CCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCC---------------
Q 023007           75 ENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS---------------  139 (288)
Q Consensus        75 ~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~---------------  139 (288)
                      |+||+||+.++++|++|++.+.+........|.++|||++|+|+++|+++++|++||+|+..+..               
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            68999999999999999999998544445789999999999999999999999999999995521               


Q ss_pred             -----------CcccceEEEeeCCcEEEc
Q 023007          140 -----------SGTWQSYVVKDQSVWHKV  157 (288)
Q Consensus       140 -----------~G~~a~~~~~~~~~l~~i  157 (288)
                                 +|+|+||+.+|+++++|+
T Consensus        81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                       899999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.45  E-value=4e-13  Score=103.44  Aligned_cols=84  Identities=30%  Similarity=0.336  Sum_probs=76.0

Q ss_pred             hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCc-ccHHHH
Q 023007          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGG-NSASKV  277 (288)
Q Consensus       200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~-~~~~~a  277 (288)
                      ++|++++|+|+.+|++|++++    .+++++++++++|+++++++++. ..+++++++++.+ +|+||||+|. +..+.+
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~----~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~-~d~vid~~g~~~~~~~~   75 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATD----RSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRG-VDVVIDCVGSGDTLQEA   75 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSS-EEEEEESSSSHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEE----CCHHHHHHHHhhccccccccccccccccccccccccc-ceEEEEecCcHHHHHHH
Confidence            589999999999999999999    68999999999999999999876 5688999998866 9999999995 555999


Q ss_pred             HhhccCCCeeC
Q 023007          278 LKFLRFREEQW  288 (288)
Q Consensus       278 ~~~l~~~G~~v  288 (288)
                      +++++++|+++
T Consensus        76 ~~~l~~~G~~v   86 (130)
T PF00107_consen   76 IKLLRPGGRIV   86 (130)
T ss_dssp             HHHEEEEEEEE
T ss_pred             HHHhccCCEEE
Confidence            99999999985

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=98.98  E-value=6.4e-09  Score=96.84  Aligned_cols=98  Identities=13%  Similarity=0.062  Sum_probs=75.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc--------------cHH
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL--------------EVK  250 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~--------------~~~  250 (288)
                      ..++++|+|+|+ |.+|+++++.|+.+|++|+++.    .++++++.++++|++.+ ++..+.              ..+
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D----~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~  236 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFD----TRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIK  236 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHH
Confidence            467999999999 9999999999999999877776    68999999999999855 554321              112


Q ss_pred             HHHHH-hcCCCCccEEEECCCcc------c-HHHHHhhccCCCeeC
Q 023007          251 NVKGL-LANLPEPALGFNCVGGN------S-ASKVLKFLRFREEQW  288 (288)
Q Consensus       251 ~i~~~-~~~~g~~D~v~d~~g~~------~-~~~a~~~l~~~G~~v  288 (288)
                      ...+. .+..+++|++|+|+|.+      . ++.+++.++++|++|
T Consensus       237 ~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIV  282 (509)
T PRK09424        237 AEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIV  282 (509)
T ss_pred             HHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEE
Confidence            22222 33222499999999963      2 489999999999875

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=98.62  E-value=2.4e-07  Score=84.40  Aligned_cols=96  Identities=15%  Similarity=0.085  Sum_probs=74.5

Q ss_pred             HHHHHHhhcC-CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007          176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       176 a~~~l~~~~~-~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~  254 (288)
                      .|.++.+..+ .-+|++|+|.|. |.+|+.+++.++.+|++|+++.    .++.+.+.++.+|++.+ +     .+   +
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d----~d~~R~~~A~~~G~~~~-~-----~~---e  253 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTE----VDPICALQAAMEGYEVM-T-----ME---E  253 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE----CChhhHHHHHhcCCEEc-c-----HH---H
Confidence            4566555444 468999999999 9999999999999999988865    57888888899998533 1     11   1


Q ss_pred             HhcCCCCccEEEECCCcccH-HHH-HhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNSA-SKV-LKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~-~~a-~~~l~~~G~~v  288 (288)
                      ...   +.|+||+|+|.+.. +.. +++++++|+++
T Consensus       254 ~v~---~aDVVI~atG~~~~i~~~~l~~mk~Ggilv  286 (413)
T cd00401         254 AVK---EGDIFVTTTGNKDIITGEHFEQMKDGAIVC  286 (413)
T ss_pred             HHc---CCCEEEECCCCHHHHHHHHHhcCCCCcEEE
Confidence            112   38999999998775 555 99999999874

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.34  E-value=5.1e-06  Score=77.53  Aligned_cols=97  Identities=15%  Similarity=0.152  Sum_probs=71.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc--------------ccHHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ--------------LEVKN  251 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~--------------~~~~~  251 (288)
                      .++++|+|+|+ |.+|+++++.++.+|++|+++.    .++++++.++++|.+.+ ++..+              ++.+.
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d----~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~  236 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFD----TRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAA  236 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHH
Confidence            45789999999 9999999999999999988877    57889999999998764 33211              11122


Q ss_pred             HHHHhcC-CCCccEEEECC---Cccc----HHHHHhhccCCCeeC
Q 023007          252 VKGLLAN-LPEPALGFNCV---GGNS----ASKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~~-~g~~D~v~d~~---g~~~----~~~a~~~l~~~G~~v  288 (288)
                      ..++... ..++|++|+|+   |.+.    ++..++.+++|+.+|
T Consensus       237 ~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIV  281 (511)
T TIGR00561       237 EMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIV  281 (511)
T ss_pred             HHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEE
Confidence            2232221 11499999999   5422    378899999999875

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.16  E-value=5.6e-05  Score=66.46  Aligned_cols=87  Identities=10%  Similarity=0.112  Sum_probs=67.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .+++++|+|. |.+|..+++.++.+|++|+++.    .+.++.+.++++|...+.      .+.+.+..+   ++|+||+
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~----r~~~~~~~~~~~G~~~~~------~~~l~~~l~---~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGA----RKSAHLARITEMGLSPFH------LSELAEEVG---KIDIIFN  216 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHcCCeeec------HHHHHHHhC---CCCEEEE
Confidence            6899999999 9999999999999999998887    467777778888865321      123334434   3999999


Q ss_pred             CCCcccH-HHHHhhccCCCeeC
Q 023007          268 CVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       268 ~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      |++.... ...++.+++++.++
T Consensus       217 t~p~~~i~~~~l~~~~~g~vII  238 (296)
T PRK08306        217 TIPALVLTKEVLSKMPPEALII  238 (296)
T ss_pred             CCChhhhhHHHHHcCCCCcEEE
Confidence            9987655 67778888887653

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.14  E-value=2.4e-05  Score=71.66  Aligned_cols=97  Identities=15%  Similarity=0.069  Sum_probs=70.2

Q ss_pred             HHHHHHHhhcCCC-CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHH
Q 023007          175 TALRMLEDFTTLN-SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVK  253 (288)
Q Consensus       175 ta~~~l~~~~~~~-~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~  253 (288)
                      ..|+++.+..++. .|++|+|.|. |.+|..+++.++.+|++|+++.    .++.+...+...|++ +.+     .+   
T Consensus       197 s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d----~dp~ra~~A~~~G~~-v~~-----l~---  262 (425)
T PRK05476        197 SLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTE----VDPICALQAAMDGFR-VMT-----ME---  262 (425)
T ss_pred             hhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc----CCchhhHHHHhcCCE-ecC-----HH---
Confidence            3566666654554 8999999999 9999999999999999988876    355555555555654 221     12   


Q ss_pred             HHhcCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                      +...   +.|++|+|+|....  ...++.+++++.++
T Consensus       263 eal~---~aDVVI~aTG~~~vI~~~~~~~mK~Gaili  296 (425)
T PRK05476        263 EAAE---LGDIFVTATGNKDVITAEHMEAMKDGAILA  296 (425)
T ss_pred             HHHh---CCCEEEECCCCHHHHHHHHHhcCCCCCEEE
Confidence            2222   39999999998764  46789999998763

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.99  E-value=7.5e-05  Score=68.05  Aligned_cols=96  Identities=16%  Similarity=0.079  Sum_probs=69.8

Q ss_pred             HHHHHHhhcC-CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007          176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       176 a~~~l~~~~~-~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~  254 (288)
                      +|.++.+..+ ...|++|+|.|. |.+|..+++.++.+|++|+++.    .++.+...+...|+. +.+     .+.   
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d----~dp~r~~~A~~~G~~-v~~-----lee---  246 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTE----VDPIRALEAAMDGFR-VMT-----MEE---  246 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEe----CChhhHHHHHhcCCE-eCC-----HHH---
Confidence            4555555434 468999999999 9999999999999999988876    345555555566753 221     111   


Q ss_pred             HhcCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                      ...   +.|++|+++|....  ...+..+++++.++
T Consensus       247 al~---~aDVVItaTG~~~vI~~~~~~~mK~Gaili  279 (406)
T TIGR00936       247 AAK---IGDIFITATGNKDVIRGEHFENMKDGAIVA  279 (406)
T ss_pred             HHh---cCCEEEECCCCHHHHHHHHHhcCCCCcEEE
Confidence            222   38999999998775  45889999998764

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.97  E-value=6.2e-05  Score=63.04  Aligned_cols=82  Identities=18%  Similarity=0.221  Sum_probs=60.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCC----CEEEeCCcc-cH-HHHHHHhcCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA----DEVFTESQL-EV-KNVKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~----~~v~~~~~~-~~-~~i~~~~~~~g  260 (288)
                      +++.++|+|+++++|.+.++.+...|++|+.+.    +.+++++.+ .+++.    ...+|-.+. .+ ..+..+...++
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~a----RR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAA----RREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEe----ccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            357899999999999999999999999999999    578888766 46773    122333332 22 33555666666


Q ss_pred             CccEEEECCCccc
Q 023007          261 EPALGFNCVGGNS  273 (288)
Q Consensus       261 ~~D~v~d~~g~~~  273 (288)
                      ++|+.+|+.|-..
T Consensus        81 ~iDiLvNNAGl~~   93 (246)
T COG4221          81 RIDILVNNAGLAL   93 (246)
T ss_pred             cccEEEecCCCCc
Confidence            7999999998543

>PLN02494 adenosylhomocysteinase

Probab=97.94  E-value=0.00011  Score=67.72  Aligned_cols=96  Identities=15%  Similarity=0.068  Sum_probs=71.0

Q ss_pred             HHHHHHhhcCC-CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007          176 ALRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       176 a~~~l~~~~~~-~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~  254 (288)
                      .|.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|+++.    .++.+...+...|+..+ +     .+.+  
T Consensus       240 ~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e----~dp~r~~eA~~~G~~vv-~-----leEa--  306 (477)
T PLN02494        240 LPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTE----IDPICALQALMEGYQVL-T-----LEDV--  306 (477)
T ss_pred             HHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCchhhHHHHhcCCeec-c-----HHHH--
Confidence            35666555444 67999999999 9999999999999999988876    35555555556676422 1     1222  


Q ss_pred             HhcCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                       ..   ..|++|+|.|....  ...++.|++++.++
T Consensus       307 -l~---~ADVVI~tTGt~~vI~~e~L~~MK~GAiLi  338 (477)
T PLN02494        307 -VS---EADIFVTTTGNKDIIMVDHMRKMKNNAIVC  338 (477)
T ss_pred             -Hh---hCCEEEECCCCccchHHHHHhcCCCCCEEE
Confidence             12   38999999998763  88999999998874

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.78  E-value=9.8e-05  Score=60.69  Aligned_cols=115  Identities=19%  Similarity=0.178  Sum_probs=75.8

Q ss_pred             hhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeC
Q 023007          165 YAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE  244 (288)
Q Consensus       165 ~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~  244 (288)
                      ..-++.-+.+.|.  +.+...+++|++||=+|+  +.|..++-+++..+ +|+.+.+.....+.....++.+|.+.|...
T Consensus        51 ~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~  125 (209)
T COG2518          51 CGQTISAPHMVAR--MLQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVR  125 (209)
T ss_pred             CCceecCcHHHHH--HHHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEE
Confidence            3344444445554  335578999999999998  67899999999888 888887432222223344567888655333


Q ss_pred             CcccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          245 SQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       245 ~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +.+-   ..-+.+.. .||.|+-+.+.+.. +..++.|++||++|
T Consensus       126 ~gDG---~~G~~~~a-PyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv  166 (209)
T COG2518         126 HGDG---SKGWPEEA-PYDRIIVTAAAPEVPEALLDQLKPGGRLV  166 (209)
T ss_pred             ECCc---ccCCCCCC-CcCEEEEeeccCCCCHHHHHhcccCCEEE
Confidence            3221   11111222 49998888877776 88899999999985

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.78  E-value=0.00029  Score=60.44  Aligned_cols=134  Identities=15%  Similarity=0.175  Sum_probs=83.1

Q ss_pred             CCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHH
Q 023007          127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCII  206 (288)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~  206 (288)
                      +++||++++.+    +|.+|.. +....+.+++++++..+..-. . ..+...+..  .+.++++||-.|+ |. |..++
T Consensus        67 ~~~g~~~~i~p----~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t-~~~l~~l~~--~~~~~~~VLDiGc-Gs-G~l~i  135 (250)
T PRK00517         67 IRIGDRLWIVP----SWEDPPD-PDEINIELDPGMAFGTGTHPT-T-RLCLEALEK--LVLPGKTVLDVGC-GS-GILAI  135 (250)
T ss_pred             EEEcCCEEEEC----CCcCCCC-CCeEEEEECCCCccCCCCCHH-H-HHHHHHHHh--hcCCCCEEEEeCC-cH-HHHHH
Confidence            57888887765    5666644 677889999998877654211 1 112222322  2568899999999 55 87777


Q ss_pred             HHHHHcCCe-EEEEEcCCCCCHHHHHHHHh----CCC-CEEEeCCcccHHHHHHHhcCCCCccEEEECCCccc----HHH
Q 023007          207 QIARHRGIH-SINIIRDRAGSDEAKEKLKG----LGA-DEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS----ASK  276 (288)
Q Consensus       207 ~la~~~g~~-vi~~~~~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~----~~~  276 (288)
                      .+++ .|+. ++++.    .++...+.+++    .+. +.+...            .+...+|+|+.+...+.    ...
T Consensus       136 ~~~~-~g~~~v~giD----is~~~l~~A~~n~~~~~~~~~~~~~------------~~~~~fD~Vvani~~~~~~~l~~~  198 (250)
T PRK00517        136 AAAK-LGAKKVLAVD----IDPQAVEAARENAELNGVELNVYLP------------QGDLKADVIVANILANPLLELAPD  198 (250)
T ss_pred             HHHH-cCCCeEEEEE----CCHHHHHHHHHHHHHcCCCceEEEc------------cCCCCcCEEEEcCcHHHHHHHHHH
Confidence            6554 5765 66665    46777665543    232 111110            11113999987765432    267


Q ss_pred             HHhhccCCCeeC
Q 023007          277 VLKFLRFREEQW  288 (288)
Q Consensus       277 a~~~l~~~G~~v  288 (288)
                      +.++|+|+|+++
T Consensus       199 ~~~~LkpgG~li  210 (250)
T PRK00517        199 LARLLKPGGRLI  210 (250)
T ss_pred             HHHhcCCCcEEE
Confidence            788999999985

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.75  E-value=0.00099  Score=58.39  Aligned_cols=149  Identities=19%  Similarity=0.186  Sum_probs=92.4

Q ss_pred             CcccccceEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcE----------------------EEcCCCC--
Q 023007          106 PAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVW----------------------HKVSKDS--  161 (288)
Q Consensus       106 p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l----------------------~~ip~~~--  161 (288)
                      ..+|-+-+ ++|++  +.++++.+|.|+.++.+.    ++|+++....+                      .++..+.  
T Consensus        31 G~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~----ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y  103 (314)
T PF11017_consen   31 GIVPVWGF-ATVVE--SRHPGIAVGERLYGYFPM----ASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAY  103 (314)
T ss_pred             cccccceE-EEEEe--eCCCCccCccEEEeeccc----cceeEEeccccCCCccccChhhhCcCchhhhceeecCCCccc
Confidence            34554444 67766  889999999999998764    33333332221                      0111111  


Q ss_pred             --Chhhh-cccccchHHHHHHHHhhc---CCCCCCeEEEeCCCChHHHHHHHHHH--HcCCeEEEEEcCCCCCHHHHHHH
Q 023007          162 --PMEYA-ATIIVNPLTALRMLEDFT---TLNSGDSIVQNGATSIVGQCIIQIAR--HRGIHSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       162 --~~~~a-a~l~~~~~ta~~~l~~~~---~~~~g~~vlI~g~~g~vG~~a~~la~--~~g~~vi~~~~~~~~~~~~~~~~  233 (288)
                        +.+.. +.+--.+.|.|-. .+..   ..-..+.|+|.+|++..++..+..++  .-+.+++.++     +....++.
T Consensus       104 ~~~~e~~~~LlrPLf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-----S~~N~~Fv  177 (314)
T PF11017_consen  104 DPEREDWQMLLRPLFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-----SARNVAFV  177 (314)
T ss_pred             CcchhHHHHHHHHHHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-----cCcchhhh
Confidence              11111 1222133455532 2221   12344789999999999999888888  4456888888     67777899


Q ss_pred             HhCCC-CEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH
Q 023007          234 KGLGA-DEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       234 ~~~g~-~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                      +.+|+ |.++.|++     +..+...  .--+++|+.|+..+
T Consensus       178 e~lg~Yd~V~~Yd~-----i~~l~~~--~~~v~VDfaG~~~~  212 (314)
T PF11017_consen  178 ESLGCYDEVLTYDD-----IDSLDAP--QPVVIVDFAGNGEV  212 (314)
T ss_pred             hccCCceEEeehhh-----hhhccCC--CCEEEEECCCCHHH
Confidence            99996 77777643     4444333  36789999999776

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.74  E-value=0.00026  Score=59.77  Aligned_cols=80  Identities=18%  Similarity=0.166  Sum_probs=50.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-Hh---CCCCEEEeCC--c-ccHHHHHH-HhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KG---LGADEVFTES--Q-LEVKNVKG-LLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~---~g~~~v~~~~--~-~~~~~i~~-~~~~~  259 (288)
                      ++++|+|+|++|++|..+++.+...|++|+.+.+    ++++.+.+ +.   .+.-+.+..+  + ...+.+.+ .....
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSR----NENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999984    55555443 22   2222222221  1 11222211 11112


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|.++.+.|.
T Consensus        80 ~~id~ii~~ag~   91 (238)
T PRK05786         80 NAIDGLVVTVGG   91 (238)
T ss_pred             CCCCEEEEcCCC
Confidence            248999999874

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=97.72  E-value=8.9e-05  Score=64.38  Aligned_cols=95  Identities=15%  Similarity=0.093  Sum_probs=61.5

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHh----CCCCEEEeCCcccHHHHHHHhc
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~i~~~~~  257 (288)
                      +.+++|++||.+|+ |. |..++++++..|.  +++++.    .+++..+.+++    .+.+.+.... .   .+..+.-
T Consensus        73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD----~s~~~l~~A~~~~~~~g~~~v~~~~-~---d~~~l~~  142 (272)
T PRK11873         73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVD----MTPEMLAKARANARKAGYTNVEFRL-G---EIEALPV  142 (272)
T ss_pred             ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEEC----CCHHHHHHHHHHHHHcCCCCEEEEE-c---chhhCCC
Confidence            56889999999998 66 8888888888775  477765    57777777754    4443221111 1   1222221


Q ss_pred             CCCCccEEEECCC-----c--ccHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVG-----G--NSASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g-----~--~~~~~a~~~l~~~G~~v  288 (288)
                      ..+.+|+|+.+..     +  ..+..+.+.|+|||+|+
T Consensus       143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~  180 (272)
T PRK11873        143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFA  180 (272)
T ss_pred             CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEE
Confidence            1124999886532     2  23488999999999984

>PRK08324 short chain dehydrogenase; Validated

Probab=97.72  E-value=0.00013  Score=71.71  Aligned_cols=115  Identities=13%  Similarity=0.063  Sum_probs=70.0

Q ss_pred             cccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       141 G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .++++|..+++..++.+ +.++++++.....+          ..+..+|++++|+|++|++|...++.+...|++|+++.
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~  453 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD  453 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence            45567777777666666 55565555321100          12234689999999999999999999999999999888


Q ss_pred             cCCCCCHHHHHHH-HhCCC--C-EE--EeCCc-ccHHH-HHHHhcCCCCccEEEECCC
Q 023007          221 RDRAGSDEAKEKL-KGLGA--D-EV--FTESQ-LEVKN-VKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       221 ~~~~~~~~~~~~~-~~~g~--~-~v--~~~~~-~~~~~-i~~~~~~~g~~D~v~d~~g  270 (288)
                      +    ++++.+.+ +.++.  . .+  .|-.+ ..++. +.+.....|++|++|+|.|
T Consensus       454 r----~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        454 L----DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             C----CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            4    55554433 33443  1 11  12222 12222 2222222335999999998

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.70  E-value=0.00012  Score=70.39  Aligned_cols=96  Identities=13%  Similarity=0.079  Sum_probs=64.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-----------------CCHHHHHHHHhCCCCEEEeCCc-
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-----------------GSDEAKEKLKGLGADEVFTESQ-  246 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-----------------~~~~~~~~~~~~g~~~v~~~~~-  246 (288)
                      ..++|++|+|+|+ |+.|+++++.++..|++|+++...+.                 ..+++.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            3678999999999 99999999999999999888753210                 1245567788999887776543 


Q ss_pred             ccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCC
Q 023007          247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFRE  285 (288)
Q Consensus       247 ~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G  285 (288)
                      .+.. ...+..   ++|+||+++|.... ...+.....+|
T Consensus       212 ~~~~-~~~~~~---~~D~Vi~AtG~~~~~~~~i~g~~~~g  247 (564)
T PRK12771        212 EDIT-LEQLEG---EFDAVFVAIGAQLGKRLPIPGEDAAG  247 (564)
T ss_pred             CcCC-HHHHHh---hCCEEEEeeCCCCCCcCCCCCCccCC
Confidence            2110 111111   39999999997643 33333333444

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.68  E-value=0.00048  Score=59.10  Aligned_cols=82  Identities=18%  Similarity=0.208  Sum_probs=56.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-h----CCCCE-EEeCC--c-ccHHHHHHHh
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-G----LGADE-VFTES--Q-LEVKNVKGLL  256 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~----~g~~~-v~~~~--~-~~~~~i~~~~  256 (288)
                      ...+++++|+||++++|...+..+...|++++.+.    +++++++.+. +    .+... ++.-+  + ...+.+....
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLva----R~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l   78 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVA----RREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDEL   78 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEe----CcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHH
Confidence            34678999999999999999999999999999999    5788876553 2    33322 32221  1 2334444433


Q ss_pred             cCC-CCccEEEECCCc
Q 023007          257 ANL-PEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~-g~~D~v~d~~g~  271 (288)
                      ... +.+|+.+||+|-
T Consensus        79 ~~~~~~IdvLVNNAG~   94 (265)
T COG0300          79 KERGGPIDVLVNNAGF   94 (265)
T ss_pred             HhcCCcccEEEECCCc
Confidence            332 359999999985

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00047  Score=58.41  Aligned_cols=79  Identities=22%  Similarity=0.268  Sum_probs=52.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++++++|+|++|++|...++.+...|++|+++.    .++++.+.+ +..+... +..+-.+.+.+.+.....+++|++|
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~----r~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~~~~d~vi   82 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAA----RNAAALDRLAGETGCEP-LRLDVGDDAAIRAALAAAGAFDGLV   82 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCeE-EEecCCCHHHHHHHHHHhCCCCEEE
Confidence            568999999999999999999999999999888    355555444 3444432 2222122223333333233599999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      ++.|.
T Consensus        83 ~~ag~   87 (245)
T PRK07060         83 NCAGI   87 (245)
T ss_pred             ECCCC
Confidence            99985

>PRK12742 oxidoreductase; Provisional

Probab=97.62  E-value=0.00052  Score=57.85  Aligned_cols=80  Identities=16%  Similarity=0.182  Sum_probs=52.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++++++|+|++|++|...++.+...|++++.+.+.   ++++.+. ..+++...+ ..+-.+.+.+.+.....+++|++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~l~~~~~~~~~-~~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAG---SKDAAERLAQETGATAV-QTDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC---CHHHHHHHHHHhCCeEE-ecCCCCHHHHHHHHHHhCCCcEEE
Confidence            46899999999999999999999999998877532   3444433 345565432 222222233333333233599999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      ++.|.
T Consensus        81 ~~ag~   85 (237)
T PRK12742         81 VNAGI   85 (237)
T ss_pred             ECCCC
Confidence            99875

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.58  E-value=0.0015  Score=57.20  Aligned_cols=86  Identities=15%  Similarity=0.128  Sum_probs=61.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++++|+|. |.+|..++..++.+|++|++..    +++++.+.+.+.|...+ .     .+.+.+...   +.|+||+
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~----R~~~~~~~~~~~g~~~~-~-----~~~l~~~l~---~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGA----RSSADLARITEMGLIPF-P-----LNKLEEKVA---EIDIVIN  215 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHCCCeee-c-----HHHHHHHhc---cCCEEEE
Confidence            5789999999 9999999999999999998887    46666666666664322 1     123333333   3999999


Q ss_pred             CCCcccH-HHHHhhccCCCee
Q 023007          268 CVGGNSA-SKVLKFLRFREEQ  287 (288)
Q Consensus       268 ~~g~~~~-~~a~~~l~~~G~~  287 (288)
                      |+..... ...++.++++..+
T Consensus       216 t~P~~ii~~~~l~~~k~~ali  236 (287)
T TIGR02853       216 TIPALVLTADVLSKLPKHAVI  236 (287)
T ss_pred             CCChHHhCHHHHhcCCCCeEE
Confidence            9977655 5567777775443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.57  E-value=0.00086  Score=60.88  Aligned_cols=91  Identities=12%  Similarity=0.114  Sum_probs=61.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|+++.    .++++.+.+. .++........  ..+.+.+...   +.|++|
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d----~~~~~~~~l~~~~g~~v~~~~~--~~~~l~~~l~---~aDvVI  235 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILD----INIDRLRQLDAEFGGRIHTRYS--NAYEIEDAVK---RADLLI  235 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEE----CCHHHHHHHHHhcCceeEeccC--CHHHHHHHHc---cCCEEE
Confidence            3456999999 9999999999999999987776    4666666554 45543211111  1223344333   399999


Q ss_pred             ECC---Cc--cc--HHHHHhhccCCCeeC
Q 023007          267 NCV---GG--NS--ASKVLKFLRFREEQW  288 (288)
Q Consensus       267 d~~---g~--~~--~~~a~~~l~~~G~~v  288 (288)
                      +|+   +.  +.  ....++.+++++.++
T Consensus       236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIv  264 (370)
T TIGR00518       236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIV  264 (370)
T ss_pred             EccccCCCCCCcCcCHHHHhcCCCCCEEE
Confidence            998   32  22  277788899988764

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.55  E-value=0.00049  Score=60.98  Aligned_cols=109  Identities=19%  Similarity=0.173  Sum_probs=72.9

Q ss_pred             CcEEEcCCCCChhhhcccccchHHHHHHHHhhcCC---CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHH
Q 023007          152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL---NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE  228 (288)
Q Consensus       152 ~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~  228 (288)
                      ...+++|+.+..+.++... +...++.++......   -++.+|+|.|+ |.+|..+++.++..|++.+.+++   .+++
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~---r~~~  213 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIAN---RTYE  213 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEe---CCHH
Confidence            3446678888877776655 566676666442222   47899999999 99999999999988865444442   4555


Q ss_pred             HH-HHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH
Q 023007          229 AK-EKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       229 ~~-~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                      +. ++++++|.. +++.     +.+.+...   +.|+||.|++.+..
T Consensus       214 ra~~la~~~g~~-~~~~-----~~~~~~l~---~aDvVi~at~~~~~  251 (311)
T cd05213         214 RAEELAKELGGN-AVPL-----DELLELLN---EADVVISATGAPHY  251 (311)
T ss_pred             HHHHHHHHcCCe-EEeH-----HHHHHHHh---cCCEEEECCCCCch
Confidence            54 566788873 3322     22223222   38999999998765

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.51  E-value=0.0017  Score=60.15  Aligned_cols=94  Identities=14%  Similarity=0.080  Sum_probs=66.1

Q ss_pred             HHHHhhc-CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHh
Q 023007          178 RMLEDFT-TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLL  256 (288)
Q Consensus       178 ~~l~~~~-~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~  256 (288)
                      .++.+.. ..-.|++|+|.|. |.+|..+++.++.+|++|+++.    .++.+...+...|+..+ +     ++.   +.
T Consensus       242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e----~dp~~a~~A~~~G~~~~-~-----lee---ll  307 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTE----IDPICALQAAMEGYQVV-T-----LED---VV  307 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCchhHHHHHhcCceec-c-----HHH---HH
Confidence            4443332 3457999999999 9999999999999999988876    34444433334565321 1     222   22


Q ss_pred             cCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007          257 ANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                      .   ..|+|+.|+|....  ...++.|++++.++
T Consensus       308 ~---~ADIVI~atGt~~iI~~e~~~~MKpGAiLI  338 (476)
T PTZ00075        308 E---TADIFVTATGNKDIITLEHMRRMKNNAIVG  338 (476)
T ss_pred             h---cCCEEEECCCcccccCHHHHhccCCCcEEE
Confidence            2   39999999998665  68899999998874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.50  E-value=0.00088  Score=54.68  Aligned_cols=80  Identities=19%  Similarity=0.208  Sum_probs=57.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC---EEEeCCccc-HHHHHH-HhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD---EVFTESQLE-VKNVKG-LLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~-~~~i~~-~~~~~g~~  262 (288)
                      -|-||||+|+++++|+..++-....|-+||++.    +++++++.++..-.+   .+.|-.+.+ ...+.+ +.+..+.+
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~g----R~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICG----RNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEec----CcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence            367999999999999999999999999999999    689999888754432   233322221 222333 33334458


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      ++++||.|-
T Consensus        80 NvliNNAGI   88 (245)
T COG3967          80 NVLINNAGI   88 (245)
T ss_pred             heeeecccc
Confidence            999999984

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.0011  Score=57.45  Aligned_cols=78  Identities=17%  Similarity=0.182  Sum_probs=53.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHHH-HHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKNV-KGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~i-~~~~~~~g~~D~v~  266 (288)
                      ++++|+|++|++|...++.+...|++|+++.    .++++.+.+...+...+ .|..+ ..++.+ .......+++|++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi   77 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATA----RKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLI   77 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            5799999999999999999989999999988    45666666655554433 33322 222222 22222233599999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      ++.|.
T Consensus        78 ~~ag~   82 (274)
T PRK05693         78 NNAGY   82 (274)
T ss_pred             ECCCC
Confidence            99984

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.0012  Score=57.37  Aligned_cols=78  Identities=17%  Similarity=0.153  Sum_probs=53.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc-cHHH----HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN----VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~----i~~~~~~~g~  261 (288)
                      .+++++|+|++|++|...++.+...|++|+++.    .++++.+.+...+...+ .|-.+. .++.    +.+...+  +
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~----r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g--~   76 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATC----RKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGG--R   76 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCC--C
Confidence            467999999999999999998888999999998    46666666666555433 232222 2222    2222223  5


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        77 id~li~~Ag~   86 (277)
T PRK05993         77 LDALFNNGAY   86 (277)
T ss_pred             ccEEEECCCc
Confidence            9999999873

>PRK06182 short chain dehydrogenase; Validated

Probab=97.48  E-value=0.00085  Score=58.06  Aligned_cols=80  Identities=18%  Similarity=0.202  Sum_probs=53.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc-cHHH-HHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~-i~~~~~~~g~~D~  264 (288)
                      ++++++|+|++|++|...++.+...|++|+++.    .++++.+.+...+...+ .|-.+. .++. +.+.....+++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~----r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAA----RRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            467999999999999999999888999999998    45666655544444322 232221 2222 2222222335999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +|++.|.
T Consensus        78 li~~ag~   84 (273)
T PRK06182         78 LVNNAGY   84 (273)
T ss_pred             EEECCCc
Confidence            9999984

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.00064  Score=60.80  Aligned_cols=80  Identities=25%  Similarity=0.279  Sum_probs=52.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCc-ccHHHHHH-HhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQ-LEVKNVKG-LLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~-~~~~~i~~-~~~~  258 (288)
                      ++++++|+|+++++|.+.++.+...|++|+++.+    ++++.+    .+++.|.+.. +  |-.+ ..++.+.+ ....
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R----~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAAR----DEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999884    555543    3345565432 2  2221 12222221 1111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus        82 ~g~iD~lVnnAG~   94 (330)
T PRK06139         82 GGRIDVWVNNVGV   94 (330)
T ss_pred             cCCCCEEEECCCc
Confidence            2359999999984

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.44  E-value=0.0011  Score=53.72  Aligned_cols=70  Identities=23%  Similarity=0.360  Sum_probs=53.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~  271 (288)
                      |+|+|++|.+|...++.+...|.+|+++++    ++++.+.  ..+.+ ++..+-.+.+.+.+...+   +|+||.+.|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R----~~~~~~~--~~~~~-~~~~d~~d~~~~~~al~~---~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVR----SPSKAED--SPGVE-IIQGDLFDPDSVKAALKG---ADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEES----SGGGHHH--CTTEE-EEESCTTCHHHHHHHHTT---SSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEec----Cchhccc--ccccc-cceeeehhhhhhhhhhhh---cchhhhhhhh
Confidence            789999999999999999999999999994    5666555  33433 333333444666666664   9999999984

...

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.00098  Score=56.06  Aligned_cols=84  Identities=12%  Similarity=0.053  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHHH-HHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKNV-KGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~i-~~~~~~~g~~D~  264 (288)
                      +++++||+|++|.+|..+++.+...|++|+++.++....++..+.++..+...+ .|-.+ ..++.+ .......+++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            478999999999999999998888899999998532111122223333343322 22221 112222 222222335999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +|++.|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9999874

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.34  E-value=0.0022  Score=55.41  Aligned_cols=85  Identities=19%  Similarity=0.251  Sum_probs=56.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE--EEeCC-cccHHH-HHHHhcCCCCc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTES-QLEVKN-VKGLLANLPEP  262 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~--v~~~~-~~~~~~-i~~~~~~~g~~  262 (288)
                      -.|+.|||+|+++++|.+.++-...+|++++...-+....++..+..++.|..+  +.|-. .+++.+ ..+..+.-|.+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            468999999999999988666666668887777666667777778888777222  22222 222211 11122223369


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |+++|++|-
T Consensus       116 ~ILVNNAGI  124 (300)
T KOG1201|consen  116 DILVNNAGI  124 (300)
T ss_pred             eEEEecccc
Confidence            999999884

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.0014  Score=57.46  Aligned_cols=80  Identities=18%  Similarity=0.281  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-EEeCC--c-ccHHHHHH-HhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VFTES--Q-LEVKNVKG-LLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~~~~--~-~~~~~i~~-~~~~  258 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+.+    .+.+.+. ++..+  + ..++.+.+ ....
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R----~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVAR----REDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3579999999999999999888888999999984    45544333    2334332 22111  1 11222221 1122


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus       115 ~g~id~li~~AG~  127 (293)
T PRK05866        115 IGGVDILINNAGR  127 (293)
T ss_pred             cCCCCEEEECCCC
Confidence            3359999999985

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.30  E-value=0.0023  Score=60.73  Aligned_cols=84  Identities=19%  Similarity=0.205  Sum_probs=55.9

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----h-----CCC-----CEEEeCCcc
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----G-----LGA-----DEVFTESQL  247 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~-----~g~-----~~v~~~~~~  247 (288)
                      ...+.+.|++|+|+|++|.+|...++.+...|++|+++++    +.++.+.+.    +     .|.     -.++..+-.
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~R----n~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt  148 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVR----SAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE  148 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHhhhhccccccccccCceEEEEecCC
Confidence            3356778999999999999999999999889999999984    555543321    1     121     112221222


Q ss_pred             cHHHHHHHhcCCCCccEEEECCCcc
Q 023007          248 EVKNVKGLLANLPEPALGFNCVGGN  272 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d~~g~~  272 (288)
                      +.+.+....+   ++|+||+|.|..
T Consensus       149 D~esI~~aLg---giDiVVn~AG~~  170 (576)
T PLN03209        149 KPDQIGPALG---NASVVICCIGAS  170 (576)
T ss_pred             CHHHHHHHhc---CCCEEEEccccc
Confidence            2345555444   399999998853

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0016  Score=55.56  Aligned_cols=77  Identities=16%  Similarity=0.084  Sum_probs=50.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC-EEEeCCcccHHHHHHHhcCCCCcc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      +++++|+|++|++|...++.+...|++|+++++    ++++.+.+    +..+.. .++..+-.+.+.+.....+  ++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQ----IAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW--DVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcC--CCC
Confidence            468999999999999999999999999999984    44433332    233332 1111111122344444333  499


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|+|.|.
T Consensus        76 ~vi~~ag~   83 (257)
T PRK09291         76 VLLNNAGI   83 (257)
T ss_pred             EEEECCCc
Confidence            99999883

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.26  E-value=0.0035  Score=51.71  Aligned_cols=97  Identities=12%  Similarity=0.082  Sum_probs=62.8

Q ss_pred             hcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHH----HhCC-CCEEEeCCcccHHHHHHH
Q 023007          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLG-ADEVFTESQLEVKNVKGL  255 (288)
Q Consensus       183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~g-~~~v~~~~~~~~~~i~~~  255 (288)
                      ...+.++++|+-.|+ |. |..++.+++..+  .+++++.    .+++..+.+    +.++ .+.+.....+..+.+...
T Consensus        35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD----~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~  108 (198)
T PRK00377         35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVD----KDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTI  108 (198)
T ss_pred             HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEE----CCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhc
Confidence            367889999999999 55 888888888764  5777776    567776654    3466 333322211111222222


Q ss_pred             hcCCCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                       .+  .+|.||.+.+..    .+..+.++|+|+|+++
T Consensus       109 -~~--~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv  142 (198)
T PRK00377        109 -NE--KFDRIFIGGGSEKLKEIISASWEIIKKGGRIV  142 (198)
T ss_pred             -CC--CCCEEEECCCcccHHHHHHHHHHHcCCCcEEE
Confidence             22  499999866532    2377788999999975

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0015  Score=57.37  Aligned_cols=80  Identities=15%  Similarity=0.167  Sum_probs=52.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCC--CEE---EeCCcc-cHHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--DEV---FTESQL-EVKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~--~~v---~~~~~~-~~~~-i~~~~~~~  259 (288)
                      +|++++|+|++|++|...++.+...|++|+++.    .++++.+.+ ++++.  +..   .|-.+. .++. +.+.....
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVD----LEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999888    455555433 44542  111   222221 1222 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus        84 g~id~vI~nAG~   95 (296)
T PRK05872         84 GGIDVVVANAGI   95 (296)
T ss_pred             CCCCEEEECCCc
Confidence            359999999985

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.24  E-value=0.0015  Score=50.54  Aligned_cols=73  Identities=16%  Similarity=0.200  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHH-HhCCCC--EEEeCCcccHHHHHHHhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKL-KGLGAD--EVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      ++++++|+|+ |++|.+++..+...|++ ++++.    ++.++.+.+ +.++..  .++...+     +.+...   ++|
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~n----Rt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~---~~D   77 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVN----RTPERAEALAEEFGGVNIEAIPLED-----LEEALQ---EAD   77 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEE----SSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH---TES
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEE----CCHHHHHHHHHHcCccccceeeHHH-----HHHHHh---hCC
Confidence            5799999999 99999999999999997 66666    566766544 455322  2333322     222223   399


Q ss_pred             EEEECCCccc
Q 023007          264 LGFNCVGGNS  273 (288)
Q Consensus       264 ~v~d~~g~~~  273 (288)
                      +||+|++..+
T Consensus        78 ivI~aT~~~~   87 (135)
T PF01488_consen   78 IVINATPSGM   87 (135)
T ss_dssp             EEEE-SSTTS
T ss_pred             eEEEecCCCC
Confidence            9999998754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0025  Score=54.40  Aligned_cols=81  Identities=20%  Similarity=0.183  Sum_probs=51.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EEEeCCcc---cHH-HHHHHhc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQL---EVK-NVKGLLA  257 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v~~~~~~---~~~-~i~~~~~  257 (288)
                      ..+++++|+|++|.+|..++..+...|++|+++.+    ++++.+.+.    ..+.. .++..+-.   .+. .+.+...
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASR----RVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999884    555544332    22221 22221111   121 1222222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..+++|++|+|.|.
T Consensus        83 ~~~~~d~li~~ag~   96 (258)
T PRK06949         83 EAGTIDILVNNSGV   96 (258)
T ss_pred             hcCCCCEEEECCCC
Confidence            23359999999984

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0022  Score=54.84  Aligned_cols=80  Identities=18%  Similarity=0.109  Sum_probs=51.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCCCEE-EeCCcc-cHHHHHH-HhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEV-FTESQL-EVKNVKG-LLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~~~v-~~~~~~-~~~~i~~-~~~~~g~~D  263 (288)
                      +|++|+|+|++|++|...++.+...|++|+++.+    ++.+.+. ..+++...+ .|..+. .++.+.+ ..+..+++|
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDI----DPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVD   81 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999874    4444433 344543222 232222 2222222 222223599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|++.|.
T Consensus        82 ~vi~~ag~   89 (255)
T PRK06057         82 IAFNNAGI   89 (255)
T ss_pred             EEEECCCc
Confidence            99999874

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.22  E-value=0.0017  Score=56.13  Aligned_cols=83  Identities=24%  Similarity=0.295  Sum_probs=52.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCCE-EEeCC-----cccHHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VFTES-----QLEVKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~~-v~~~~-----~~~~~~-i~~~~~~~  259 (288)
                      .|+.|+|+||++++|.+.+.-....|++++.+++... ..++. +.+++.+... ++...     .++.+. +.......
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~r-rl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRAR-RLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhh-hHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            5689999999999998877777777999888885432 22333 4555665444 32211     112222 22222334


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|+.+|+.|-
T Consensus        90 g~vDvLVNNAG~  101 (282)
T KOG1205|consen   90 GRVDVLVNNAGI  101 (282)
T ss_pred             CCCCEEEecCcc
Confidence            569999999884

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.22  E-value=0.0024  Score=54.90  Aligned_cols=80  Identities=16%  Similarity=0.163  Sum_probs=51.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCC-EEE--eCCcc-cH-HHHHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVF--TESQL-EV-KNVKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~-~v~--~~~~~-~~-~~i~~~~~~~g~  261 (288)
                      ++++++|+|++|++|...++.+...|++|+++.    .++++.+.+.+ .+.. ..+  |-.+. .. +.+.+.....++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLD----KSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999887    45555554443 3322 112  22221 11 222232222335


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        80 id~li~~Ag~   89 (262)
T TIGR03325        80 IDCLIPNAGI   89 (262)
T ss_pred             CCEEEECCCC
Confidence            9999999873

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06128 oxidoreductase; Provisional

Probab=97.21  E-value=0.0036  Score=55.02  Aligned_cols=84  Identities=15%  Similarity=0.127  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHhCCCCEEE---eCCc-ccHHH-HHHHhcCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG--SDEAKEKLKGLGADEVF---TESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~--~~~~~~~~~~~g~~~v~---~~~~-~~~~~-i~~~~~~~g  260 (288)
                      .|+++||+|++|++|...++.+...|++|+++......  .++..+.++..+....+   |-.+ ..++. +.+.....+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999888899999877532110  11122334445543222   1111 11222 222222233


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|++.|.
T Consensus       134 ~iD~lV~nAg~  144 (300)
T PRK06128        134 GLDILVNIAGK  144 (300)
T ss_pred             CCCEEEECCcc
Confidence            59999999884

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.002  Score=55.02  Aligned_cols=80  Identities=18%  Similarity=0.277  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCcc-cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQL-EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~~-~~~~-i~~~~~~  258 (288)
                      ++++++|+|+++++|...++.+...|++|+.+.+    ++++.+.    +++.+.+.. +  |-.+. .++. +.+....
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR----RQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999988889999999884    4444432    233443322 2  21111 1222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        81 ~~~id~li~~ag~   93 (254)
T PRK07478         81 FGGLDIAFNNAGT   93 (254)
T ss_pred             cCCCCEEEECCCC
Confidence            3359999999984

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.21  E-value=0.0019  Score=54.89  Aligned_cols=80  Identities=16%  Similarity=0.193  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++|+.+.+    ++++.+.    ++..+... .+  |-.+ ..++. +......
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDL----NQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999988874    4444332    23344432 12  2111 12222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|.+|++.|.
T Consensus        80 ~~~id~vi~~ag~   92 (253)
T PRK08217         80 FGQLNGLINNAGI   92 (253)
T ss_pred             cCCCCEEEECCCc
Confidence            2359999999883

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0056  Score=51.95  Aligned_cols=35  Identities=20%  Similarity=0.324  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++++++|+|++|++|...+..+...|++|+++.+.
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~   39 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ   39 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999888899999988753

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0023  Score=54.86  Aligned_cols=80  Identities=21%  Similarity=0.269  Sum_probs=50.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHh-CCCC-EEEeCCcccHHHHHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKG-LGAD-EVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~-~g~~-~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      .+++++|+|+++++|...++.+...|++|+++.+    ++++.+.    +++ .+.. .++..+-.+.+.+.++....++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   81 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVAR----DADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD   81 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence            4689999999999999999888889999999884    4444332    222 2322 2222221222333333333346


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        82 id~lv~~ag~   91 (259)
T PRK06125         82 IDILVNNAGA   91 (259)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0031  Score=53.93  Aligned_cols=77  Identities=17%  Similarity=0.167  Sum_probs=48.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++++|+|++|++|...++.+...|++|+++.+..   .+..+... .+....+..+-.+.+.+.+..+   ++|++|+
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~---~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~---~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK---INNSESND-ESPNEWIKWECGKEESLDKQLA---SLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc---hhhhhhhc-cCCCeEEEeeCCCHHHHHHhcC---CCCEEEE
Confidence            368999999999999999998889999999987531   12222111 1111222222122234444332   4999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      |.|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9985

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.19  E-value=0.0025  Score=55.26  Aligned_cols=83  Identities=16%  Similarity=0.155  Sum_probs=50.1

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCc-ccHHH-HHHHhcCCC
Q 023007          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~-~~~~~-i~~~~~~~g  260 (288)
                      ++++++|+|+++  ++|.+.++.+...|++|+++.+... ..++.+.+ +++|....+  |-.+ ..++. +.+.....|
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~-~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA-LGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH-HHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            568999999986  9999999988889999998764211 11222222 345543322  2111 12222 222222234


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        85 ~iD~lVnnAG~   95 (271)
T PRK06505         85 KLDFVVHAIGF   95 (271)
T ss_pred             CCCEEEECCcc
Confidence            69999999984

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.0028  Score=54.38  Aligned_cols=82  Identities=17%  Similarity=0.177  Sum_probs=51.2

Q ss_pred             CCCCCeEEEeCCCC-hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHh-CCCCEE--E--eCCc-ccHHHHHH
Q 023007          186 LNSGDSIVQNGATS-IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKG-LGADEV--F--TESQ-LEVKNVKG  254 (288)
Q Consensus       186 ~~~g~~vlI~g~~g-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~-~g~~~v--~--~~~~-~~~~~i~~  254 (288)
                      +.++++++|+|++| ++|.+.++.+...|++|+++.+    ++++.+.    +++ ++...+  +  |-.+ ..++.+.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   89 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDI----HERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID   89 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence            44578999999986 8999999999999999888774    3433322    222 453332  2  2222 12233222


Q ss_pred             H-hcCCCCccEEEECCCc
Q 023007          255 L-LANLPEPALGFNCVGG  271 (288)
Q Consensus       255 ~-~~~~g~~D~v~d~~g~  271 (288)
                      . .+..|++|++|+|.|.
T Consensus        90 ~~~~~~g~id~li~~ag~  107 (262)
T PRK07831         90 AAVERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            2 1222359999999984

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.15  E-value=0.0027  Score=54.34  Aligned_cols=84  Identities=14%  Similarity=0.176  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcccHHHH----HHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNV----KGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~i----~~~~~~~g~~  262 (288)
                      +++++||+|++|.+|...++.+...|++|+++.+.....++..+.+++.+.... +..+-.+.+.+    .......+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999888532111122233344554322 22111111222    1111122359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|.|.|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999999985

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.0024  Score=55.50  Aligned_cols=80  Identities=19%  Similarity=0.126  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-EeCC--c-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTES--Q-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~~~~--~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|++|++|.+.++.+...|++|+++.+    ++++.+    .++..+.+.. +..+  + ..++. +.+....
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r----~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDV----DKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999998899999988873    444333    2233343321 2111  1 11222 1222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        81 ~g~id~li~nAg~   93 (275)
T PRK05876         81 LGHVDVVFSNAGI   93 (275)
T ss_pred             cCCCCEEEECCCc
Confidence            3459999999984

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0022  Score=57.37  Aligned_cols=80  Identities=18%  Similarity=0.210  Sum_probs=52.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHHHHH-HhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKNVKG-LLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~i~~-~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+    ++++.+.    +++.|.+.. +  |-.+ ..++.+.+ ....
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R----~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLAR----GEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999889999999884    4554432    334554432 1  2222 12222222 2222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        83 ~g~iD~lInnAg~   95 (334)
T PRK07109         83 LGPIDTWVNNAMV   95 (334)
T ss_pred             CCCCCEEEECCCc
Confidence            3469999999984

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.14  E-value=0.0028  Score=54.45  Aligned_cols=80  Identities=15%  Similarity=0.159  Sum_probs=51.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCC-EEE--eCCc-ccHH-HHHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD-EVF--TESQ-LEVK-NVKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~-~v~--~~~~-~~~~-~i~~~~~~~g~  261 (288)
                      ++++++|+|+++++|...++.+...|++|+++.    .++++.+.+. +++.. .++  |-.+ ...+ .+.+.....++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLE----RSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999999999999887    4555555443 34321 122  2111 1122 22222223345


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        81 id~li~~ag~   90 (263)
T PRK06200         81 LDCFVGNAGI   90 (263)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.0025  Score=54.41  Aligned_cols=80  Identities=21%  Similarity=0.192  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-E--EeCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-V--FTESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v--~~~~~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|+++++|...++.+...|++|+++.+    ++++.+.+    +..+... .  .|-.+ ..++. +.+....
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAAR----HLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998874    44444322    2333221 1  12211 11222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus        84 ~g~id~lv~~ag~   96 (253)
T PRK05867         84 LGGIDIAVCNAGI   96 (253)
T ss_pred             hCCCCEEEECCCC
Confidence            2359999999874

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.0021  Score=55.43  Aligned_cols=80  Identities=20%  Similarity=0.319  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC----CCC-EEE--eCCc-ccHHHHHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GAD-EVF--TESQ-LEVKNVKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----g~~-~v~--~~~~-~~~~~i~~~~~~  258 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.+    ++++.+.+ +++    +.+ ..+  |-.+ ..++.+.+....
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSR----NEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN   82 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence            5789999999999999999999999999998874    44444332 121    322 122  2111 122222221122


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|+++++.|.
T Consensus        83 ~g~iD~lv~nag~   95 (263)
T PRK08339         83 IGEPDIFFFSTGG   95 (263)
T ss_pred             hCCCcEEEECCCC
Confidence            3469999999874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.10  E-value=0.0035  Score=53.54  Aligned_cols=82  Identities=13%  Similarity=0.163  Sum_probs=51.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-E--eCCc-ccHHHHH-HHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQ-LEVKNVK-GLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~--~~~~-~~~~~i~-~~~~~~g~~  262 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.+.  ..++..+.+++.+.+.. +  |-.+ ..++.+. +.....|++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA--EAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc--hHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999887632  11222334455554321 2  2211 1222222 222223469


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++++|.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999999874

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0029  Score=53.95  Aligned_cols=80  Identities=19%  Similarity=0.236  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCE-EEeCCcc---cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQL---EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+    ++++.    +.+++.+... .+..+-.   .++. +......
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADR----DAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999888888999999985    44332    2334444321 2211111   1221 1222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        82 ~g~id~li~~ag~   94 (253)
T PRK06172         82 YGRLDYAFNNAGI   94 (253)
T ss_pred             hCCCCEEEECCCC
Confidence            2359999999874

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=97.10  E-value=0.00012  Score=55.74  Aligned_cols=45  Identities=27%  Similarity=0.245  Sum_probs=32.2

Q ss_pred             CCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC--cccH-HHHHhhccCCCeeC
Q 023007          236 LGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG--GNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       236 ~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g--~~~~-~~a~~~l~~~G~~v  288 (288)
                      ||+++++||+..++      +... ++|+||||+|  ++.+ ..++++| ++|+||
T Consensus         1 LGAd~vidy~~~~~------~~~~-~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v   48 (127)
T PF13602_consen    1 LGADEVIDYRDTDF------AGPG-GVDVVIDTVGQTGESLLDASRKLL-PGGRVV   48 (127)
T ss_dssp             CT-SEEEETTCSHH------HTTS--EEEEEESS-CCHHHCGGGCCCTE-EEEEEE
T ss_pred             CCcCEEecCCCccc------cCCC-CceEEEECCCCccHHHHHHHHHHC-CCCEEE
Confidence            69999999996554      3333 4999999999  5554 6667888 999975

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.10  E-value=0.0034  Score=53.89  Aligned_cols=83  Identities=11%  Similarity=0.020  Sum_probs=49.5

Q ss_pred             CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCc---ccHHHHH-HHhcCCC
Q 023007          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQ---LEVKNVK-GLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~---~~~~~i~-~~~~~~g  260 (288)
                      .|++++|+|++  +++|.+.++.+...|++|+++.+... ..+..+.+ ++++...++.-+-   ..++.+. ......|
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK-ARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            47899999997  48999999888889999988874311 11222322 3444322332221   1222222 2222234


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        88 ~ld~lv~nAg~   98 (258)
T PRK07533         88 RLDFLLHSIAF   98 (258)
T ss_pred             CCCEEEEcCcc
Confidence            69999999874

>PRK08017 oxidoreductase; Provisional

Probab=97.10  E-value=0.0055  Score=52.23  Aligned_cols=76  Identities=20%  Similarity=0.221  Sum_probs=53.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc-cH----HHHHHHhcCCCCcc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EV----KNVKGLLANLPEPA  263 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~----~~i~~~~~~~g~~D  263 (288)
                      ++++|+|++|++|...++.+...|++|+++.    .++++.+.+++.+...+ .|..+. .+    +.+.....+  ++|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~----r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~--~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAAC----RKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDN--RLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEe----CCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCC--CCe
Confidence            5799999999999999999999999998888    46677777766776543 232221 11    223332223  489


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      .++++.|.
T Consensus        77 ~ii~~ag~   84 (256)
T PRK08017         77 GLFNNAGF   84 (256)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.10  E-value=0.0033  Score=57.36  Aligned_cols=104  Identities=15%  Similarity=0.071  Sum_probs=69.3

Q ss_pred             hHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHH
Q 023007          173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV  252 (288)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i  252 (288)
                      ....+..+.+...+++|++||-+|+  +.|..+..+++..|++|+++.    .+++..+.+++.....-+.....+   .
T Consensus       152 q~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giD----lS~~~l~~A~~~~~~l~v~~~~~D---~  222 (383)
T PRK11705        152 QEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVT----ISAEQQKLAQERCAGLPVEIRLQD---Y  222 (383)
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhccCeEEEEECc---h
Confidence            4445555666678899999999998  577888889998899999987    688888888653321111111111   1


Q ss_pred             HHHhcCCCCccEEEEC-----CCcc----cHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNC-----VGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~-----~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      ..+ .+  .+|.|+..     +|..    .++.+.+.|+|+|+++
T Consensus       223 ~~l-~~--~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lv  264 (383)
T PRK11705        223 RDL-NG--QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFL  264 (383)
T ss_pred             hhc-CC--CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEE
Confidence            122 22  49988753     3432    2377788999999874

>PRK06196 oxidoreductase; Provisional

Probab=97.09  E-value=0.0045  Score=54.84  Aligned_cols=80  Identities=20%  Similarity=0.223  Sum_probs=50.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCc-ccHHH-HHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKN-VKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~-~~~~~-i~~~~~~~g~~  262 (288)
                      .+++++|+|++|++|...+..+...|++|+++.+    ++++.+.+ .++..-.++  |-.+ ..++. +.+.....+++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R----~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPAR----RPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999988889999999884    45544332 233211222  2211 11222 22222222359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|++.|.
T Consensus       101 D~li~nAg~  109 (315)
T PRK06196        101 DILINNAGV  109 (315)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK06194 hypothetical protein; Provisional

Probab=97.09  E-value=0.0038  Score=54.29  Aligned_cols=80  Identities=23%  Similarity=0.270  Sum_probs=49.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EEeCCcccHHHHHH----HhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLEVKNVKG----LLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~~~~~~~~~~i~~----~~~~  258 (288)
                      .++++||+|++|++|...++.+...|++|+++.+    +.++.+.    +...+... ++..+-.+.+.+.+    ....
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADV----QQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3579999999999999999988889999988874    3333322    22223322 12222112222222    2222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        81 ~g~id~vi~~Ag~   93 (287)
T PRK06194         81 FGAVHLLFNNAGV   93 (287)
T ss_pred             cCCCCEEEECCCC
Confidence            3359999999985

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.09  E-value=0.0063  Score=56.35  Aligned_cols=144  Identities=17%  Similarity=0.168  Sum_probs=88.1

Q ss_pred             cccccceEEEEEEecCCCCCCCCCCEE-EecCCC---------------CcccceEEEeeCCcEEEcCCCCChhhhcccc
Q 023007          107 AVGGYEGVGEVYSVGSAVTRLAPGDWV-IPSPPS---------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATII  170 (288)
Q Consensus       107 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V-~~~~~~---------------~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~  170 (288)
                      ..-|+|+++.+.+++++++..-.|..- .+....               .+.|+..        +++|+.+....+ ...
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~-i~~  160 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETG-IGA  160 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcC-CCC
Confidence            456999999999999988775556532 221110               1222222        333444333222 222


Q ss_pred             cchHHHHHHHHhhcC---CCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHH-HHHhCCCCEEEeCC
Q 023007          171 VNPLTALRMLEDFTT---LNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKE-KLKGLGADEVFTES  245 (288)
Q Consensus       171 ~~~~ta~~~l~~~~~---~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~  245 (288)
                      .+...++.++.....   ..++++|+|+|+ |.+|.++++.++..|+ +++++.    .+.++.+ +++.+|.+ +++. 
T Consensus       161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~----r~~~ra~~la~~~g~~-~~~~-  233 (423)
T PRK00045        161 GAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVAN----RTLERAEELAEEFGGE-AIPL-  233 (423)
T ss_pred             CCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEe----CCHHHHHHHHHHcCCc-EeeH-
Confidence            245566666643222   257899999999 9999999999999998 566665    4666644 66777753 3322 


Q ss_pred             cccHHHHHHHhcCCCCccEEEECCCccc
Q 023007          246 QLEVKNVKGLLANLPEPALGFNCVGGNS  273 (288)
Q Consensus       246 ~~~~~~i~~~~~~~g~~D~v~d~~g~~~  273 (288)
                          +...+...   ++|+||+|+|.+.
T Consensus       234 ----~~~~~~l~---~aDvVI~aT~s~~  254 (423)
T PRK00045        234 ----DELPEALA---EADIVISSTGAPH  254 (423)
T ss_pred             ----HHHHHHhc---cCCEEEECCCCCC
Confidence                22223222   3999999998754

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.08  E-value=0.0039  Score=53.25  Aligned_cols=81  Identities=15%  Similarity=0.181  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHH-HHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKN-VKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~-i~~~~~~~g~~D~  264 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+   .+++..+.++..+...+ .|-.+ ..++. +.+.....+++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~---~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYN---SAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999999988889999988764   23444444444343222 12222 12222 2222222335999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +|+|.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9999875

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0032  Score=53.39  Aligned_cols=80  Identities=15%  Similarity=0.079  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCcc-cHHHHHH-HhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQL-EVKNVKG-LLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~~-~~~~i~~-~~~~  258 (288)
                      ++++++|+|++|++|...+..+...|++++++.+    ++++.+.    ++..+... ++  |-.+. .++.+.+ ....
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDG----LAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998873    4443332    23334321 22  22221 1222222 1122


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus        82 ~~~id~vi~~ag~   94 (250)
T PRK12939         82 LGGLDGLVNNAGI   94 (250)
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999985

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.002  Score=57.12  Aligned_cols=34  Identities=26%  Similarity=0.308  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++++|+|+++++|...++.+...|++|+++++
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R   46 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVR   46 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999999999888889999999985

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.06  E-value=0.0078  Score=49.45  Aligned_cols=79  Identities=19%  Similarity=0.173  Sum_probs=51.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC----CCCEEEeCCcccHHHHHHHhcCCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GADEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----g~~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      -++.+++|+|++|.+|..++..+...|++++++.+    +.++.+.+ +.+    +.. +........+.+.+...+   
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R----~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~---   97 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGR----DLERAQKAADSLRARFGEG-VGAVETSDDAARAAAIKG---   97 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhhcCCc-EEEeeCCCHHHHHHHHhc---
Confidence            35689999999999999988888888999988874    55555433 222    222 111111122344444433   


Q ss_pred             ccEEEECCCccc
Q 023007          262 PALGFNCVGGNS  273 (288)
Q Consensus       262 ~D~v~d~~g~~~  273 (288)
                      .|+||.++....
T Consensus        98 ~diVi~at~~g~  109 (194)
T cd01078          98 ADVVFAAGAAGV  109 (194)
T ss_pred             CCEEEECCCCCc
Confidence            899999987655

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0043  Score=53.31  Aligned_cols=80  Identities=16%  Similarity=0.163  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhC-CCCEE--E--eCCc-ccHHH-HHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGL-GADEV--F--TESQ-LEVKN-VKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~-g~~~v--~--~~~~-~~~~~-i~~~~  256 (288)
                      .|++++|+|+++++|...++.+...|++|+++.+    ++++.+.    +++. +...+  +  |-.+ ..++. +.+..
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGR----DEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999999884    4443332    2222 11122  1  2222 12222 22222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      +..+++|++|+|.|.
T Consensus        83 ~~~g~id~li~~Ag~   97 (265)
T PRK07062         83 ARFGGVDMLVNNAGQ   97 (265)
T ss_pred             HhcCCCCEEEECCCC
Confidence            223469999999984

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.05  E-value=0.0047  Score=52.42  Aligned_cols=82  Identities=20%  Similarity=0.241  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE-EEeCC--c-ccHHH-HHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~-v~~~~--~-~~~~~-i~~~~~~~g~~  262 (288)
                      .|++++|+|++|++|...++.+...|++|+.+.+..  .++..+.+++++... ++..+  + ..+.. +.+.....+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999998888999999987431  122234445555331 22111  1 11222 22222222359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|+|.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999999875

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.05  E-value=0.0043  Score=53.88  Aligned_cols=83  Identities=17%  Similarity=0.173  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCcc-cHHH-HHHHhcCCC
Q 023007          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQL-EVKN-VKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~~-~~~~-i~~~~~~~g  260 (288)
                      .|++++|+|++  +++|.+.++.+...|++|+++.++. ..+++.+.+ ++++....+  |-.+. .++. +.+.....|
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE-ALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH-HHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999996  7999999988888999999887421 112333333 445543222  22221 2222 222223334


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        83 ~iDilVnnAG~   93 (274)
T PRK08415         83 KIDFIVHSVAF   93 (274)
T ss_pred             CCCEEEECCcc
Confidence            69999999984

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.03  E-value=0.0052  Score=51.78  Aligned_cols=80  Identities=16%  Similarity=0.093  Sum_probs=50.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHH-HHHHhcCCCCccEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKN-VKGLLANLPEPALG  265 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~-i~~~~~~~g~~D~v  265 (288)
                      +++++|+|+++++|...++.+...|++|+++.+.   .++..+.++..+...+ .|-.+ ..++. +.......+++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRT---HYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCC---chhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence            4689999999999999999888899999998853   2223344455553222 12111 12222 22222223359999


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      |+|.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            999874

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0042  Score=53.18  Aligned_cols=83  Identities=16%  Similarity=0.093  Sum_probs=51.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCC--EEE--eCCcc-cHHHH-HHHhcC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD--EVF--TESQL-EVKNV-KGLLAN  258 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~--~v~--~~~~~-~~~~i-~~~~~~  258 (288)
                      .-+++++||+|++|.+|...++.+...|++|+++.+    +++..+.+. .+.-.  .++  |-.+. .++.+ .+..+.
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDV----SEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            357789999999999999999999999999988884    444443332 22211  122  22211 11221 111122


Q ss_pred             CCCccEEEECCCcc
Q 023007          259 LPEPALGFNCVGGN  272 (288)
Q Consensus       259 ~g~~D~v~d~~g~~  272 (288)
                      .+++|+||.+.|..
T Consensus        84 ~~~~d~vi~~ag~~   97 (264)
T PRK12829         84 FGGLDVLVNNAGIA   97 (264)
T ss_pred             hCCCCEEEECCCCC
Confidence            23599999998854

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.02  E-value=0.0029  Score=54.25  Aligned_cols=77  Identities=18%  Similarity=0.154  Sum_probs=47.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCC--c-ccHHH-HHHHhcCCCCc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEVFTES--Q-LEVKN-VKGLLANLPEP  262 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~--~-~~~~~-i~~~~~~~g~~  262 (288)
                      +++|+|+++++|...++.+...|++|+.+.+    ++++.+.+    ++.+..+.+..+  + ..++. +.+.....+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i   77 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSR----NEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGI   77 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            6899999999999999888888999998874    44443322    223322222222  1 12222 22222223459


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|++.|.
T Consensus        78 d~li~naG~   86 (259)
T PRK08340         78 DALVWNAGN   86 (259)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK08589 short chain dehydrogenase; Validated

Probab=97.01  E-value=0.0042  Score=53.75  Aligned_cols=83  Identities=19%  Similarity=0.227  Sum_probs=49.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE-E--EeCCc-ccHHH-HHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-V--FTESQ-LEVKN-VKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~-v--~~~~~-~~~~~-i~~~~~~~g~~  262 (288)
                      ++++++|+|+++++|.+.++.+...|++|+++.+. ...++..+.+++.+... .  .|-.+ ..++. +.......|++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            47899999999999999998888889999999842 11111122233334221 1  22211 12222 22222223359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|+|.|.
T Consensus        84 d~li~~Ag~   92 (272)
T PRK08589         84 DVLFNNAGV   92 (272)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.0043  Score=53.81  Aligned_cols=80  Identities=19%  Similarity=0.216  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-E-EE--eCCcc-cHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-E-VF--TESQL-EVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-~-v~--~~~~~-~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|++|++|...++.+...|++|+++.    .++++.+.+.+.... . .+  |-.+. .+.. +.......++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~----r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTV----RSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEe----CCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            357899999999999999999888999999998    455555544433221 1 11  22221 1111 2222222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        79 ~d~vv~~ag~   88 (277)
T PRK06180         79 IDVLVNNAGY   88 (277)
T ss_pred             CCEEEECCCc
Confidence            9999999886

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.0049  Score=53.21  Aligned_cols=79  Identities=13%  Similarity=0.031  Sum_probs=50.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCcc-cHHH-HHHHhcCCCCcc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQL-EVKN-VKGLLANLPEPA  263 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~~-~~~~-i~~~~~~~g~~D  263 (288)
                      +++++|+|++|++|...++.+...|++|+++.    .++++.+.+ +.++...++  |-.+. .++. +.......+++|
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~----r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGD----LDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPID   80 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            57999999999999999988888899998887    455555433 344411222  22221 2222 222222223599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|+|.|.
T Consensus        81 ~li~~ag~   88 (273)
T PRK07825         81 VLVNNAGV   88 (273)
T ss_pred             EEEECCCc
Confidence            99999884

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.0051  Score=52.88  Aligned_cols=80  Identities=16%  Similarity=0.223  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC-EEE--eCCcc-cHHHH-HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EVF--TESQL-EVKNV-KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~-~v~--~~~~~-~~~~i-~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+    ++++.+.+    +..+.. .++  |..+. .++.+ .+....
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAAR----TESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999998889999999884    44443322    222322 222  22221 22222 222122


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        85 ~~~id~vi~~Ag~   97 (263)
T PRK07814         85 FGRLDIVVNNVGG   97 (263)
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999874

>PRK08264 short chain dehydrogenase; Validated

Probab=96.99  E-value=0.0063  Score=51.26  Aligned_cols=77  Identities=17%  Similarity=0.223  Sum_probs=49.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      .+++++|+|++|.+|...++.+...|+ +|+.+.+    ++++.+.   .+.. .++..+-.+.+.+.++....+.+|++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r----~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAAR----DPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEec----Chhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            467999999999999999999999999 8888874    4443322   2222 12222212223344333333359999


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      |.+.|.
T Consensus        78 i~~ag~   83 (238)
T PRK08264         78 VNNAGI   83 (238)
T ss_pred             EECCCc
Confidence            999986

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0048  Score=51.69  Aligned_cols=77  Identities=16%  Similarity=0.149  Sum_probs=48.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE--eCCc-ccHHHHHHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF--TESQ-LEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~--~~~~-~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++++|+|++|++|...++.+...|++|+++.+.    +++.+.+++++...++  |-.+ ..++.+.+...+. ++|++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~id~vi   76 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRG----PQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQ-RFDLLF   76 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCC----CcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcC-CCCEEE
Confidence            579999999999999888888889999999854    3333334433322222  2212 1233333333322 499999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      .+.|.
T Consensus        77 ~~ag~   81 (225)
T PRK08177         77 VNAGI   81 (225)
T ss_pred             EcCcc
Confidence            99864

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0044  Score=53.12  Aligned_cols=79  Identities=15%  Similarity=0.245  Sum_probs=48.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCcc-cHHH-HHHHhcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQL-EVKN-VKGLLANL  259 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~~-~~~~-i~~~~~~~  259 (288)
                      +++++|+|++|++|...++.+...|++|+++.+    ++++.+    .++..+.... +  |-.+. .++. +.+.....
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   76 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAAR----NETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF   76 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            368999999999999999988899999999984    433332    2333443221 1  11111 1111 22222222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus        77 ~~id~vi~~ag~   88 (263)
T PRK06181         77 GGIDILVNNAGI   88 (263)
T ss_pred             CCCCEEEECCCc
Confidence            359999999875

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0059  Score=52.03  Aligned_cols=80  Identities=20%  Similarity=0.246  Sum_probs=49.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE--EEeCCccc---HHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTESQLE---VKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~---~~~-i~~~~~~~g~  261 (288)
                      ++++++|+|++|++|...++.+...|++|+.+.+    +++..+...++....  .+..+-.+   ++. +.+..+..++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   89 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDR----SEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR   89 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999888889999998884    444333333332211  22211111   222 1122222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        90 ~d~vi~~ag~   99 (255)
T PRK06841         90 IDILVNSAGV   99 (255)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.97  E-value=0.0077  Score=53.51  Aligned_cols=97  Identities=16%  Similarity=0.163  Sum_probs=64.9

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGL  255 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i~~~  255 (288)
                      +...++++++||..|+ | .|..++.+++..+.  +|+++.    .+++..+.+    ++.|.+.+.....+..+...  
T Consensus        74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVD----is~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~--  145 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVE----YSRKICEIAKRNVRRLGIENVIFVCGDGYYGVP--  145 (322)
T ss_pred             HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCcEEEEeCChhhccc--
Confidence            3456889999999999 5 59999999998764  577765    466655444    45676544322222111111  


Q ss_pred             hcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                        ..+.+|+|+.+.+.... ...++.|+++|+++
T Consensus       146 --~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lv  177 (322)
T PRK13943        146 --EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVI  177 (322)
T ss_pred             --ccCCccEEEECCchHHhHHHHHHhcCCCCEEE
Confidence              11249999998886555 77889999999874

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.0053  Score=52.36  Aligned_cols=79  Identities=13%  Similarity=0.172  Sum_probs=49.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC-EEEeCC--c-ccHHHHH-HHhcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVFTES--Q-LEVKNVK-GLLANL  259 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~-~v~~~~--~-~~~~~i~-~~~~~~  259 (288)
                      |++++|+|++|++|...++.+...|++|+++.+    ++++.+.    +++.+.. .++..+  + ..++.+. +.....
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGR----TKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF   76 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999988874    3443332    2223322 222222  1 1222222 222222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|++.|.
T Consensus        77 ~~id~lI~~ag~   88 (252)
T PRK07677         77 GRIDALINNAAG   88 (252)
T ss_pred             CCccEEEECCCC
Confidence            359999999874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.95  E-value=0.011  Score=55.05  Aligned_cols=82  Identities=15%  Similarity=0.186  Sum_probs=52.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCCEE-EeCCcc-cHHHHHHHh-cCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEV-FTESQL-EVKNVKGLL-ANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~~v-~~~~~~-~~~~i~~~~-~~~g~~D  263 (288)
                      ++++++|+|++|++|...++.+...|++|+++...  ...+.. +..++++...+ .|-.+. .++.+.+.. ...+++|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~--~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP--AAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC--ccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            57899999999999999999999999999988642  123333 33345664332 233222 223332222 2223599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|+|.|.
T Consensus       287 ~vi~~AG~  294 (450)
T PRK08261        287 IVVHNAGI  294 (450)
T ss_pred             EEEECCCc
Confidence            99999984

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.95  E-value=0.0075  Score=51.51  Aligned_cols=82  Identities=18%  Similarity=0.187  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCC--c-ccHHH-HHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTES--Q-LEVKN-VKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~--~-~~~~~-i~~~~~~~g~~  262 (288)
                      .|++++|+|++|++|.+.++.+...|++|+.+...  ..++..+.+++.+.... +..+  + ..++. +.+.....+++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIV--EPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCc--chHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999877532  22333444455553211 1111  1 12222 22222223359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|+|.|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.0044  Score=52.88  Aligned_cols=80  Identities=18%  Similarity=0.153  Sum_probs=49.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC-EE--EeCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EV--FTESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~-~v--~~~~~-~~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+    ++++.+.+    +..+.. ..  .|-.+ ..++. +......
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAAR----TAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999988899999998884    44443322    222322 11  22211 11221 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        80 ~g~~d~vi~~ag~   92 (258)
T PRK07890         80 FGRVDALVNNAFR   92 (258)
T ss_pred             cCCccEEEECCcc
Confidence            3359999999874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.94  E-value=0.0062  Score=52.82  Aligned_cols=84  Identities=14%  Similarity=0.067  Sum_probs=50.9

Q ss_pred             CCCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCcc---cHHH-HHHHhcCC
Q 023007          187 NSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQL---EVKN-VKGLLANL  259 (288)
Q Consensus       187 ~~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~---~~~~-i~~~~~~~  259 (288)
                      -.+++++|+|++  +++|.+.++.+...|++|+++.+.. ...++.+.+ ++++....+.-+-.   .++. +.+.....
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            356899999996  7999999988888999998876321 112333333 34553222222211   2222 22222333


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|++|++.|.
T Consensus        87 g~iD~lv~nAG~   98 (272)
T PRK08159         87 GKLDFVVHAIGF   98 (272)
T ss_pred             CCCcEEEECCcc
Confidence            469999999874

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.0078  Score=51.55  Aligned_cols=85  Identities=18%  Similarity=0.161  Sum_probs=50.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCC-CHHHHHHHHhCCCC--EEE--eCCc-ccHHH-HHHHhc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAG-SDEAKEKLKGLGAD--EVF--TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~-~~~~~~~~~~~g~~--~v~--~~~~-~~~~~-i~~~~~  257 (288)
                      +..+++|+|+|++|++|...++-+... |++|+++.++... .++..+.++..+..  +++  |-.+ ..++. +.+...
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            556789999999999999988876666 5899999864221 11122334444431  222  2212 12222 223222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                       .+++|++|++.|.
T Consensus        85 -~g~id~li~~ag~   97 (253)
T PRK07904         85 -GGDVDVAIVAFGL   97 (253)
T ss_pred             -cCCCCEEEEeeec
Confidence             2359999998875

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.93  E-value=0.0078  Score=50.75  Aligned_cols=74  Identities=22%  Similarity=0.323  Sum_probs=55.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~  271 (288)
                      |+|+|++|.+|...++.+...+.+|.+.++..  +.+..+.++..|+..+ .-+-.+.+.+.+...|   +|.||.+.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~--~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al~g---~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP--SSDRAQQLQALGAEVV-EADYDDPESLVAALKG---VDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS--HHHHHHHHHHTTTEEE-ES-TT-HHHHHHHHTT---CSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEecc--chhhhhhhhcccceEe-ecccCCHHHHHHHHcC---CceEEeecCc
Confidence            78999999999999999999999999999752  3455667788888644 3333344566666664   9999999983

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.93  E-value=0.005  Score=52.57  Aligned_cols=80  Identities=18%  Similarity=0.213  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+    .+++.|... .+  |-.+ ..++. +......
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGR----DPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999988888999998874    444433    223333221 12  2211 11222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        85 ~~~~d~li~~ag~   97 (255)
T PRK07523         85 IGPIDILVNNAGM   97 (255)
T ss_pred             cCCCCEEEECCCC
Confidence            3359999999985

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.92  E-value=0.0028  Score=55.00  Aligned_cols=98  Identities=22%  Similarity=0.247  Sum_probs=60.0

Q ss_pred             HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EE-EeCCcccHH
Q 023007          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EV-FTESQLEVK  250 (288)
Q Consensus       177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v-~~~~~~~~~  250 (288)
                      +..+.+.+++++|++||-+|+ | -|..++.+++..|++|++++    .+++..++++    +.|.. .+ +...+    
T Consensus        51 ~~~~~~~~~l~~G~~vLDiGc-G-wG~~~~~~a~~~g~~v~git----lS~~Q~~~a~~~~~~~gl~~~v~v~~~D----  120 (273)
T PF02353_consen   51 LDLLCEKLGLKPGDRVLDIGC-G-WGGLAIYAAERYGCHVTGIT----LSEEQAEYARERIREAGLEDRVEVRLQD----  120 (273)
T ss_dssp             HHHHHTTTT--TT-EEEEES--T-TSHHHHHHHHHH--EEEEEE----S-HHHHHHHHHHHHCSTSSSTEEEEES-----
T ss_pred             HHHHHHHhCCCCCCEEEEeCC-C-ccHHHHHHHHHcCcEEEEEE----CCHHHHHHHHHHHHhcCCCCceEEEEee----
Confidence            344556688999999999998 4 78889999999999999999    6888887764    56642 11 11111    


Q ss_pred             HHHHHhcCCCCccEEEEC-----CCccc----HHHHHhhccCCCeeC
Q 023007          251 NVKGLLANLPEPALGFNC-----VGGNS----ASKVLKFLRFREEQW  288 (288)
Q Consensus       251 ~i~~~~~~~g~~D~v~d~-----~g~~~----~~~a~~~l~~~G~~v  288 (288)
                       .+++..   ++|.|+..     +|.+.    ++.+-+.|+|+|+++
T Consensus       121 -~~~~~~---~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~  163 (273)
T PF02353_consen  121 -YRDLPG---KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLV  163 (273)
T ss_dssp             -GGG------S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEE
T ss_pred             -ccccCC---CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEE
Confidence             112222   48987764     55322    377889999999974

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0052  Score=52.91  Aligned_cols=80  Identities=19%  Similarity=0.205  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCcc-cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQL-EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++|+.+.+    ++++.+    .+.+.+... ++  |-.+. .++. +.+....
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASR----SQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999988899999999884    333332    222333221 22  22221 1222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        84 ~~~iD~vi~~ag~   96 (264)
T PRK07576         84 FGPIDVLVSGAAG   96 (264)
T ss_pred             cCCCCEEEECCCC
Confidence            2359999998863

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.92  E-value=0.0059  Score=52.51  Aligned_cols=83  Identities=12%  Similarity=0.133  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCc-ccHHH-HHHHhcCCC
Q 023007          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~-~~~~~-i~~~~~~~g  260 (288)
                      .|++++|+|+++  ++|.+.++.+...|++|+...+.. ..++..+.+ +++|....+  |-.+ ..++. +.......|
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            568999999986  899998888888899998876321 112223333 334533322  2222 12222 222223334


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|+++++.|.
T Consensus        86 ~iDilVnnag~   96 (260)
T PRK06603         86 SFDFLLHGMAF   96 (260)
T ss_pred             CccEEEEcccc
Confidence            69999999874

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0077  Score=51.01  Aligned_cols=80  Identities=18%  Similarity=0.135  Sum_probs=51.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEE-E--eCCc-ccHHHHHH-HhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV-F--TESQ-LEVKNVKG-LLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v-~--~~~~-~~~~~i~~-~~~~~g~  261 (288)
                      ++++++|+|++|++|...++.+...|++++.+.+    ++++.+ ..++++.... +  |-.+ .....+.+ ..+..++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGR----DPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGR   80 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC----CHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999988873    444443 3345554322 2  2111 11222222 2222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        81 id~vi~~ag~   90 (249)
T PRK06500         81 LDAVFINAGV   90 (249)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.0049  Score=53.40  Aligned_cols=79  Identities=20%  Similarity=0.198  Sum_probs=49.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC---EEE--eCCcc-cHHHHHHHhcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD---EVF--TESQL-EVKNVKGLLAN  258 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~---~v~--~~~~~-~~~~i~~~~~~  258 (288)
                      +++++|+|++|.+|...+..+...|++|+++.+    +++..+.    .+..+.+   .++  |..+. .++.+.+....
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~   78 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMR----NPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKE   78 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeC----CHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHh
Confidence            578999999999999999988888999999984    3443322    2223321   122  22221 22223333333


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|+++.|.|.
T Consensus        79 ~~~id~vv~~ag~   91 (280)
T PRK06914         79 IGRIDLLVNNAGY   91 (280)
T ss_pred             cCCeeEEEECCcc
Confidence            3459999999874

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.0039  Score=53.40  Aligned_cols=34  Identities=18%  Similarity=0.177  Sum_probs=30.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|+++++|...++.+...|++|+++.+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r   39 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADL   39 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999999999999899999998874

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.91  E-value=0.0085  Score=51.85  Aligned_cols=103  Identities=17%  Similarity=0.162  Sum_probs=70.6

Q ss_pred             hHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EEEeCCcc
Q 023007          173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQL  247 (288)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v~~~~~~  247 (288)
                      =..++..+....+++||++||=+|+  +=|.+++.+|+..|++|++++    .+++..++++    +.|.. .+-.    
T Consensus        57 Q~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvT----lS~~Q~~~~~~r~~~~gl~~~v~v----  126 (283)
T COG2230          57 QRAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVT----LSEEQLAYAEKRIAARGLEDNVEV----  126 (283)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEee----CCHHHHHHHHHHHHHcCCCcccEE----
Confidence            3456666667789999999999998  558889999999999999999    7888887664    46654 1100    


Q ss_pred             cHHHHHHHhcCCCCccEEEE-----CCCcc----cHHHHHhhccCCCeeC
Q 023007          248 EVKNVKGLLANLPEPALGFN-----CVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d-----~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      .....+..+.   .||-|+.     .+|.+    .+..+-++|+++|+++
T Consensus       127 ~l~d~rd~~e---~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~l  173 (283)
T COG2230         127 RLQDYRDFEE---PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRML  173 (283)
T ss_pred             Eecccccccc---ccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEE
Confidence            0111222222   3776654     45542    2378889999999863

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.91  E-value=0.0076  Score=51.58  Aligned_cols=83  Identities=17%  Similarity=0.190  Sum_probs=50.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE-EEeCCccc---HHH-HHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VFTESQLE---VKN-VKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~---~~~-i~~~~~~~g~~  262 (288)
                      .++++||+|+++++|...++.+...|++|+++.+. ...++..+.+.+.+... ++..+-.+   ++. +.+.....|++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999998853 11122223334444331 22221111   221 22222223359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|+|.|.
T Consensus        93 d~li~~ag~  101 (258)
T PRK06935         93 DILVNNAGT  101 (258)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.90  E-value=0.006  Score=52.48  Aligned_cols=83  Identities=17%  Similarity=0.146  Sum_probs=49.1

Q ss_pred             CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCC--c-ccHHH-HHHHhcCCC
Q 023007          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTES--Q-LEVKN-VKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~--~-~~~~~-i~~~~~~~g  260 (288)
                      ++++++|+|+  ++++|.+.++.+...|++|+.+.+.+ ..++..+.+ ++.+....+.-+  + ..++. +....+..|
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5689999996  57999999988888999998875321 122333333 233432222211  1 12222 222222234


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        84 ~iD~lVnnAG~   94 (261)
T PRK08690         84 GLDGLVHSIGF   94 (261)
T ss_pred             CCcEEEECCcc
Confidence            69999999975

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.0082  Score=51.40  Aligned_cols=78  Identities=18%  Similarity=0.120  Sum_probs=49.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCC-CC-EE--EeCCcc-cHHH-HHHHhcC-CCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG-AD-EV--FTESQL-EVKN-VKGLLAN-LPE  261 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g-~~-~v--~~~~~~-~~~~-i~~~~~~-~g~  261 (288)
                      +++||+|++|++|...++.+...|++|+.+.    .+.++.+.+ ..++ .. .+  .|-.+. .++. +...... .++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYD----INEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999998888999999988    355555444 3333 11 11  222221 1222 2222111 235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        78 id~vi~~ag~   87 (260)
T PRK08267         78 LDVLFNNAGI   87 (260)
T ss_pred             CCEEEECCCC
Confidence            9999999985

>PRK08643 acetoin reductase; Validated

Probab=96.89  E-value=0.0057  Score=52.20  Aligned_cols=79  Identities=18%  Similarity=0.202  Sum_probs=48.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCcc-cHHH-HHHHhcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQL-EVKN-VKGLLANL  259 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~~-~~~~-i~~~~~~~  259 (288)
                      +++++|+|++|++|...++.+...|++|+++.+    ++++.+    .+++.+.... +  |-.+. .++. +.+.....
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDY----NEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF   77 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999884    333332    2233333221 2  11111 1222 22222222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus        78 ~~id~vi~~ag~   89 (256)
T PRK08643         78 GDLNVVVNNAGV   89 (256)
T ss_pred             CCCCEEEECCCC
Confidence            359999999874

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.0056  Score=51.94  Aligned_cols=34  Identities=15%  Similarity=0.168  Sum_probs=30.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|++|.+|...++.+...|++|+++.+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r   38 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADI   38 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999999999988889999999984

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.0059  Score=52.40  Aligned_cols=80  Identities=16%  Similarity=0.146  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC--CCC-EEE--eCCc-ccHHHHHHHhcCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL--GAD-EVF--TESQ-LEVKNVKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~--g~~-~v~--~~~~-~~~~~i~~~~~~~g  260 (288)
                      ++++++|+|++|++|...+..+...|++|+++.+    ++++.+.+ +++  +.. ..+  |-.+ ..++.+.+.....+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   79 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGR----NAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG   79 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence            4679999999999999999988889999999984    55554433 222  211 122  1111 11222222111123


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|++.|.
T Consensus        80 ~id~lv~~ag~   90 (263)
T PRK09072         80 GINVLINNAGV   90 (263)
T ss_pred             CCCEEEECCCC
Confidence            59999999885

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.0064  Score=51.17  Aligned_cols=80  Identities=15%  Similarity=0.149  Sum_probs=49.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCC---CEEEeCCcc---cH-HHHHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA---DEVFTESQL---EV-KNVKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~---~~v~~~~~~---~~-~~i~~~~~~~  259 (288)
                      .+++++|+|++|.+|...++.+...|++|+++.+    ++++.+ ..+++..   -+.+..+-.   .+ +.+.+.....
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITAR----DQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeC----CHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999888888999999884    444433 2233321   112211111   11 1222222222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|++.|.
T Consensus        81 ~~~d~vi~~ag~   92 (237)
T PRK07326         81 GGLDVLIANAGV   92 (237)
T ss_pred             CCCCEEEECCCC
Confidence            359999999874

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.88  E-value=0.0029  Score=51.30  Aligned_cols=85  Identities=12%  Similarity=0.112  Sum_probs=53.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      -.|++|.|+|. |.+|...++.++.+|++|+...+    +....+.....+...    .  .++.+..      ..|+|+
T Consensus        34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~----~~~~~~~~~~~~~~~----~--~l~ell~------~aDiv~   96 (178)
T PF02826_consen   34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDR----SPKPEEGADEFGVEY----V--SLDELLA------QADIVS   96 (178)
T ss_dssp             STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEES----SCHHHHHHHHTTEEE----S--SHHHHHH------H-SEEE
T ss_pred             cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecc----cCChhhhccccccee----e--ehhhhcc------hhhhhh
Confidence            46899999999 99999999999999999999984    333333334444311    1  1222222      277777


Q ss_pred             ECCCc-----ccH-HHHHhhccCCCeeC
Q 023007          267 NCVGG-----NSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       267 d~~g~-----~~~-~~a~~~l~~~G~~v  288 (288)
                      .++..     ..+ ...++.|+++..||
T Consensus        97 ~~~plt~~T~~li~~~~l~~mk~ga~lv  124 (178)
T PF02826_consen   97 LHLPLTPETRGLINAEFLAKMKPGAVLV  124 (178)
T ss_dssp             E-SSSSTTTTTSBSHHHHHTSTTTEEEE
T ss_pred             hhhccccccceeeeeeeeeccccceEEE
Confidence            77652     223 66677777776553

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.0081  Score=52.47  Aligned_cols=35  Identities=14%  Similarity=0.117  Sum_probs=30.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      -++++++|+|+++++|.+.++.+...|++|+++..
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~   38 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI   38 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeC
Confidence            46789999999999999999888889999988764

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.0045  Score=52.31  Aligned_cols=35  Identities=23%  Similarity=0.332  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~   39 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARH   39 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence            46899999999999999998888899999999853

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0042  Score=54.74  Aligned_cols=34  Identities=26%  Similarity=0.344  Sum_probs=30.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++++|+|++|++|...++.+...|++|+++.+
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r   48 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVR   48 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC
Confidence            5689999999999999999888888999998884

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.87  E-value=0.0067  Score=51.72  Aligned_cols=80  Identities=19%  Similarity=0.164  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcc---cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQL---EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~  258 (288)
                      .++++||+|++|++|...++.+...|++++.+.+    ++++.+    .++..+... .+..+-.   .++. +......
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDI----TAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999988889999998874    444332    223333221 2212111   1222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|+++++.|.
T Consensus        84 ~~~id~vi~~ag~   96 (254)
T PRK08085         84 IGPIDVLINNAGI   96 (254)
T ss_pred             cCCCCEEEECCCc
Confidence            3359999999984

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.87  E-value=0.0062  Score=52.10  Aligned_cols=80  Identities=16%  Similarity=0.182  Sum_probs=49.1

Q ss_pred             CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE--EE--eCCc-ccHHHH-HHHhcCC
Q 023007          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VF--TESQ-LEVKNV-KGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~--v~--~~~~-~~~~~i-~~~~~~~  259 (288)
                      .|++++|+|++  +++|.+.++.+...|++|+++.+    +++..+.++++....  .+  |-.+ ..++.+ .......
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQ----NDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecC----chHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            57899999998  79999988888889999998874    333333344432211  12  1111 122222 2222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|++|++.|.
T Consensus        82 g~iD~lv~nAg~   93 (252)
T PRK06079         82 GKIDGIVHAIAY   93 (252)
T ss_pred             CCCCEEEEcccc
Confidence            469999999874

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0072  Score=51.07  Aligned_cols=81  Identities=22%  Similarity=0.260  Sum_probs=50.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-EEeCCcccHHH----HHHHhc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VFTESQLEVKN----VKGLLA  257 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~----i~~~~~  257 (288)
                      ..+++++|+|++|++|..++..+...|++|+++.+    ++++.+.+    ++.+... ++..+-.+.+.    +.....
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVAR----SQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLE   79 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            35679999999999999999999999999999884    44443322    2333221 22111111122    222222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..+++|++|+|.|.
T Consensus        80 ~~~~id~lv~~ag~   93 (241)
T PRK07454         80 QFGCPDVLINNAGM   93 (241)
T ss_pred             HcCCCCEEEECCCc
Confidence            23359999999984

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0048  Score=52.40  Aligned_cols=80  Identities=20%  Similarity=0.162  Sum_probs=48.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhC--CCC-EEEeCCccc---HHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGL--GAD-EVFTESQLE---VKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~--g~~-~v~~~~~~~---~~~-i~~~~~~~  259 (288)
                      ++++++|+|++|.+|...++.+...|++|+.+.+    +.++.+ ....+  +.. .++..+-.+   ++. +....+..
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADR----DAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecC----CHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4679999999999999998888888999999984    333332 22222  322 122211111   222 12222222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|.|.|.
T Consensus        80 ~~id~vi~~ag~   91 (252)
T PRK06138         80 GRLDVLVNNAGF   91 (252)
T ss_pred             CCCCEEEECCCC
Confidence            359999999984

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.0058  Score=51.52  Aligned_cols=79  Identities=15%  Similarity=0.159  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      +|++++|+|+++++|.+.+.-+...|++|+.+.+    ++++.+    .+++.+.+. .+  |-.+ ..++. +.+..+.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r----~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQ----DQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999988888889999998874    444433    233445332 12  2111 12222 2222222


Q ss_pred             CC-CccEEEECCC
Q 023007          259 LP-EPALGFNCVG  270 (288)
Q Consensus       259 ~g-~~D~v~d~~g  270 (288)
                      .| ++|++|++.|
T Consensus        80 ~g~~iD~li~nag   92 (227)
T PRK08862         80 FNRAPDVLVNNWT   92 (227)
T ss_pred             hCCCCCEEEECCc
Confidence            23 5999999986

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.008  Score=51.36  Aligned_cols=80  Identities=16%  Similarity=0.178  Sum_probs=49.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH---HHHhCCCCE-EEeCCcc---cHHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE---KLKGLGADE-VFTESQL---EVKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~---~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~~  259 (288)
                      +|++++|+|++|++|...++.+...|++++++.+.    +++.+   .+++.+... .+..+-.   .++. +.+.....
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS----APDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC----hhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999888888889999988753    33322   233344321 2211111   1211 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus        82 ~~id~vi~~ag~   93 (258)
T PRK08628         82 GRIDGLVNNAGV   93 (258)
T ss_pred             CCCCEEEECCcc
Confidence            359999999983

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.85  E-value=0.007  Score=52.40  Aligned_cols=80  Identities=18%  Similarity=0.302  Sum_probs=49.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCC-EEEeCC--c-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD-EVFTES--Q-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~-~v~~~~--~-~~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+    ++++.+    .+++.+.. ..+..+  + ..++. +.+....
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDR----NQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999899999998874    333332    22233332 112211  1 11222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus        85 ~g~id~li~~ag~   97 (278)
T PRK08277         85 FGPCDILINGAGG   97 (278)
T ss_pred             cCCCCEEEECCCC
Confidence            3359999999883

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.0047  Score=53.19  Aligned_cols=78  Identities=15%  Similarity=0.207  Sum_probs=48.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHH-HHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKN-VKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~-i~~~~~~~g~~D~  264 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+..  .+...+ .|-.+ ..++. +.......|++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r----~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSR----NPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC----Chhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            3578999999999999998888888999999884    33333221  122211 22222 11222 2222222345999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +|+|.|.
T Consensus        77 li~~ag~   83 (270)
T PRK06179         77 LVNNAGV   83 (270)
T ss_pred             EEECCCC
Confidence            9999985

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.84  E-value=0.012  Score=52.78  Aligned_cols=82  Identities=17%  Similarity=0.204  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +|++|||+|++|.+|...++.+...|.+|+++.+...........+. .+.. ..+..+-.+.+.+.++..+.+ +|+||
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~vi   80 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEFK-PEIVF   80 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhcC-CCEEE
Confidence            46899999999999999999999999999988754322211111111 1111 112111122344555444433 89999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      ++.+.
T Consensus        81 h~A~~   85 (349)
T TIGR02622        81 HLAAQ   85 (349)
T ss_pred             ECCcc
Confidence            99974

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.011  Score=50.43  Aligned_cols=84  Identities=20%  Similarity=0.196  Sum_probs=50.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-HHHHHHHHhCCCCE-EEeCC--c-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~g~~~-v~~~~--~-~~~~~-i~~~~~~~g~  261 (288)
                      ++++++|+|+++++|...++.+...|++|+++.+..... ++..+.++..+... .+..+  + ..++. +.+.....++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999887532100 11122333444322 22111  1 11222 2222222345


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            9999999984

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.0067  Score=52.40  Aligned_cols=78  Identities=17%  Similarity=0.136  Sum_probs=48.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE----EeCCcc-cHHH-HHHHhcCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV----FTESQL-EVKN-VKGLLANL  259 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v----~~~~~~-~~~~-i~~~~~~~  259 (288)
                      ++++|+|++|++|...++.+...|++|+++.+    ++++.+    .++..+...+    .|-.+. .++. +.+.....
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDR----DADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH   76 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc
Confidence            37999999999999999988889999988874    444332    2233343211    232221 2222 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus        77 ~~id~lv~~ag~   88 (272)
T PRK07832         77 GSMDVVMNIAGI   88 (272)
T ss_pred             CCCCEEEECCCC
Confidence            359999999984

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.83  E-value=0.007  Score=51.79  Aligned_cols=80  Identities=19%  Similarity=0.248  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC-EEEeCCcccHHHH----HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD-EVFTESQLEVKNV----KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~i----~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++|+.+.+    +.++.+.+    +..+.. .++..+-.+.+.+    .+....
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSAR----KAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999998889999998884    44444332    233322 1222121112222    222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|.|.|.
T Consensus        87 ~~~id~vi~~ag~   99 (259)
T PRK08213         87 FGHVDILVNNAGA   99 (259)
T ss_pred             hCCCCEEEECCCC
Confidence            2359999999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.83  E-value=0.0059  Score=51.77  Aligned_cols=80  Identities=19%  Similarity=0.233  Sum_probs=49.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCC--CC-EEEeCCcc---cHHHH-HHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG--AD-EVFTESQL---EVKNV-KGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g--~~-~v~~~~~~---~~~~i-~~~~~~~  259 (288)
                      ++++++|+|++|.+|...++.+...|++|+++.+    ++++.+.+ ..+.  .. .++..+-.   .++.+ .+..+..
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDR----NEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4579999999999999999888888999999984    44444332 2222  21 12211111   12222 2221222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|.+.|.
T Consensus        80 ~~~d~vi~~ag~   91 (251)
T PRK07231         80 GSVDILVNNAGT   91 (251)
T ss_pred             CCCCEEEECCCC
Confidence            359999999975

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.0091  Score=51.28  Aligned_cols=80  Identities=11%  Similarity=0.179  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCE-EE--eCCcc-cHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE-VF--TESQL-EVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|+++++|...++.+...|++|+++.+    ++++.+ ..++++... ++  |-.+. .++. +.......++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   80 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDI----DADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGR   80 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999899999999874    444443 334454321 22  22111 1222 2222222335


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        81 id~lv~~ag~   90 (261)
T PRK08265         81 VDILVNLACT   90 (261)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.0075  Score=51.33  Aligned_cols=80  Identities=15%  Similarity=0.229  Sum_probs=49.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC-EEEeCC--c-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVFTES--Q-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~-~v~~~~--~-~~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++|+.+.+    +.++.+.    +.+.+.. ..+..+  + ..++. +.+....
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSR----KLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3579999999999999999999999999999884    4443332    2233332 222211  1 11222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|+++++.|.
T Consensus        83 ~~~id~li~~ag~   95 (252)
T PRK07035         83 HGRLDILVNNAAA   95 (252)
T ss_pred             cCCCCEEEECCCc
Confidence            2359999999874

>PLN02253 xanthoxin dehydrogenase

Probab=96.81  E-value=0.0066  Score=52.64  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=48.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCC--C-EEE--eCCcc-cHHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA--D-EVF--TESQL-EVKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~--~-~v~--~~~~~-~~~~-i~~~~~~~  259 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    +++..+ ...+++.  . ..+  |-.+. .++. +.......
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL----QDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            4689999999999999998888888999998873    333332 2333332  1 111  22211 1211 22222222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus        93 g~id~li~~Ag~  104 (280)
T PLN02253         93 GTLDIMVNNAGL  104 (280)
T ss_pred             CCCCEEEECCCc
Confidence            359999999874

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.80  E-value=0.0078  Score=50.77  Aligned_cols=80  Identities=19%  Similarity=0.263  Sum_probs=49.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-EeCCccc---HHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQLE---VKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~~~~~~~---~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|...+..+...|++|+++.+    ++++.+    .++..+.... +..+-..   ++. +.+....
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLAR----TEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999888889999999885    333332    2233332221 2222111   222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|.+.|.
T Consensus        82 ~~~id~vi~~ag~   94 (239)
T PRK07666         82 LGSIDILINNAGI   94 (239)
T ss_pred             cCCccEEEEcCcc
Confidence            3359999999875

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.01  Score=52.38  Aligned_cols=35  Identities=23%  Similarity=0.147  Sum_probs=31.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            47899999999999999999999999999998754

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.80  E-value=0.0068  Score=53.95  Aligned_cols=79  Identities=19%  Similarity=0.244  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----Hh-CCCCE----EEeCCc---ccHHHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGADE----VFTESQ---LEVKNVKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~g~~~----v~~~~~---~~~~~i~~~  255 (288)
                      .|++++|+|+++++|.+.++.+...|++|+.+.+    ++++.+.+    ++ .+...    ..|-.+   ...+.+.+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R----~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~  127 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVAR----NPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKET  127 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEEC----CHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHH
Confidence            5899999999999999988888788999999984    55555433    22 22111    123222   123445544


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      .++.. +|++|++.|.
T Consensus       128 ~~~~d-idilVnnAG~  142 (320)
T PLN02780        128 IEGLD-VGVLINNVGV  142 (320)
T ss_pred             hcCCC-ccEEEEecCc
Confidence            44422 7799999874

>PRK05717 oxidoreductase; Validated

Probab=96.79  E-value=0.012  Score=50.14  Aligned_cols=80  Identities=16%  Similarity=0.119  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCE-EE--eCCc-ccHH-HHHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE-VF--TESQ-LEVK-NVKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~-v~--~~~~-~~~~-~i~~~~~~~g~  261 (288)
                      .|++++|+|++|.+|...+..+...|++|+++..    ++++.+ ..++++... .+  |-.+ ..++ .+.+..+..|+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADL----DRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999988888999988863    443333 334454321 11  1111 1121 12333333345


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        85 id~li~~ag~   94 (255)
T PRK05717         85 LDALVCNAAI   94 (255)
T ss_pred             CCEEEECCCc
Confidence            9999999884

>PRK06720 hypothetical protein; Provisional

Probab=96.79  E-value=0.01  Score=47.69  Aligned_cols=80  Identities=15%  Similarity=0.187  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCE-EEeCCcccHHHHH----HHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLEVKNVK----GLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~-v~~~~~~~~~~i~----~~~~~  258 (288)
                      +++.++|+|+++++|...+..+...|++|+++.+    +++..    +.+++.+... .+..+-...+.+.    +....
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDI----DQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999988888888999988874    33333    2223334332 2222211122222    22223


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        91 ~G~iDilVnnAG~  103 (169)
T PRK06720         91 FSRIDMLFQNAGL  103 (169)
T ss_pred             cCCCCEEEECCCc
Confidence            3469999999885

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.77  E-value=0.0025  Score=47.02  Aligned_cols=91  Identities=16%  Similarity=0.091  Sum_probs=57.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHH-HcCCeEEEEEcCCCCCHHHHHHHHh-C---CC-CEEEeCCcccHHHHHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIAR-HRGIHSINIIRDRAGSDEAKEKLKG-L---GA-DEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~-~~g~~vi~~~~~~~~~~~~~~~~~~-~---g~-~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      ||++||-+|+  +.|..++.+++ ..+++++++.    .+++..+.+++ .   +. +.+--... +   +........+
T Consensus         1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~~~~i~~~~~-d---~~~~~~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVD----ISPEMLEIARERAAEEGLSDRITFVQG-D---AEFDPDFLEP   70 (112)
T ss_dssp             TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHHHHHTTTTTTEEEEES-C---CHGGTTTSSC
T ss_pred             CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHHHhcCCCCCeEEEEC-c---cccCcccCCC
Confidence            6789999988  45788888888 5788988887    57888877753 2   22 22211111 1   1111111124


Q ss_pred             ccEEEECC-Cc----cc------HHHHHhhccCCCeeC
Q 023007          262 PALGFNCV-GG----NS------ASKVLKFLRFREEQW  288 (288)
Q Consensus       262 ~D~v~d~~-g~----~~------~~~a~~~l~~~G~~v  288 (288)
                      +|+|+... ..    +.      ++...+.|+|+|+++
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lv  108 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLV  108 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEE
Confidence            99999877 22    12      467889999999985

...

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.77  E-value=0.011  Score=54.03  Aligned_cols=88  Identities=16%  Similarity=0.303  Sum_probs=52.4

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCH---HHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD---EAKEKLKGLGADEVFTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~---~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g  260 (288)
                      .+...+.+|+|+|++|.+|...++.+...|.+|+++++.....+   ...+......-..++..+-.+.+.+.....+.+
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~  134 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG  134 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC
Confidence            44566789999999999999999999889999999986421110   011111122111222222222234444333221


Q ss_pred             -CccEEEECCCc
Q 023007          261 -EPALGFNCVGG  271 (288)
Q Consensus       261 -~~D~v~d~~g~  271 (288)
                       ++|+||+|.+.
T Consensus       135 ~~~D~Vi~~aa~  146 (390)
T PLN02657        135 DPVDVVVSCLAS  146 (390)
T ss_pred             CCCcEEEECCcc
Confidence             39999999874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.77  E-value=0.0078  Score=50.98  Aligned_cols=82  Identities=21%  Similarity=0.155  Sum_probs=49.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH---HHHHhCCCCEEE---eCCcc-cHHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK---EKLKGLGADEVF---TESQL-EVKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~~~~g~~~v~---~~~~~-~~~~-i~~~~~~~  259 (288)
                      ++++++|+|++|++|...++.+...|+++++..+.  ..+...   +.++..+.....   |-.+. .++. +.+.....
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGP--NSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC--ChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            36789999999999999999999999998886532  122222   223334543321   22211 1211 22222222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus        80 ~~id~li~~ag~   91 (246)
T PRK12938         80 GEIDVLVNNAGI   91 (246)
T ss_pred             CCCCEEEECCCC
Confidence            359999999985

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.76  E-value=0.013  Score=50.62  Aligned_cols=83  Identities=19%  Similarity=0.194  Sum_probs=48.8

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCC--c-ccHHHH-HHHhcCCC
Q 023007          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTES--Q-LEVKNV-KGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~--~-~~~~~i-~~~~~~~g  260 (288)
                      +|++++|+|+++  ++|.+.++.+...|++|+.+.+++ ..++..+.+. +.+....+.-+  + ..++.+ .+.....|
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            478999999975  899998888888899998776421 1123333332 23322222211  1 122222 22223334


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        84 ~iD~linnAg~   94 (262)
T PRK07984         84 KFDGFVHSIGF   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            69999999973

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.76  E-value=0.0077  Score=51.01  Aligned_cols=84  Identities=12%  Similarity=0.085  Sum_probs=49.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCCcccHHHH----HHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNV----KGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i----~~~~~~~g~~  262 (288)
                      .+++++|+|++|.+|...+..+...|++|+++.++....++..+.+++.+.. .++..+-.+.+.+    .+.....+++
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999999888888999999985311112222233333322 1222111111222    2222223359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|.|.|.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999999865

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.0061  Score=52.16  Aligned_cols=79  Identities=16%  Similarity=0.165  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCC--C-EEE--eCCc-ccHHH-HHHHhcCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--D-EVF--TESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~--~-~v~--~~~~-~~~~~-i~~~~~~~g  260 (288)
                      +++++|+|++|++|...++.+...|++|+++.+    +.++.+.+ +++..  + ..+  |-.+ ..+.. +.+.....+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   77 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVAR----RTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHG   77 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            468999999999999998888888999998873    45554433 33321  1 112  2111 11211 222222234


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      .+|++|++.|.
T Consensus        78 ~id~lv~~ag~   88 (257)
T PRK07024         78 LPDVVIANAGI   88 (257)
T ss_pred             CCCEEEECCCc
Confidence            58999999874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.74  E-value=0.011  Score=49.80  Aligned_cols=80  Identities=18%  Similarity=0.242  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEEE---eCCcc-cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVF---TESQL-EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v~---~~~~~-~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|.+|...++.+...|.+|+.+.+    ++++.    +.+++.+....+   |-.+. .++. +.+....
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDS----NEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----ChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999998889999988885    33332    233334433222   22221 1222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|.++.+.|.
T Consensus        80 ~~~id~vi~~ag~   92 (246)
T PRK05653         80 FGALDILVNNAGI   92 (246)
T ss_pred             hCCCCEEEECCCc
Confidence            3358999999865

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=96.74  E-value=0.0085  Score=52.51  Aligned_cols=140  Identities=11%  Similarity=0.121  Sum_probs=75.8

Q ss_pred             CCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHH--HHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL--RMLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~--~~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      .++.|++.+..+    .|.++...+....+.+.+++.+-.+.    ...|..  ..+..  ...++++||-.|+ |. |.
T Consensus       105 p~~~g~~~~i~p----~w~~~~~~~~~~~i~ldpg~aFgtG~----h~tt~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~  172 (288)
T TIGR00406       105 PVQFGKRFWICP----SWRDVPSDEDALIIMLDPGLAFGTGT----HPTTSLCLEWLED--LDLKDKNVIDVGC-GS-GI  172 (288)
T ss_pred             CEEEcCeEEEEC----CCcCCCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHh--hcCCCCEEEEeCC-Ch-hH
Confidence            356778776664    33333222334556666665544321    122222  22222  2457899999999 54 77


Q ss_pred             HHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHh----CCCCE-EEeCCcccHHHHHHHhcCCCCccEEEECCCccc----
Q 023007          204 CIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG----LGADE-VFTESQLEVKNVKGLLANLPEPALGFNCVGGNS----  273 (288)
Q Consensus       204 ~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~----  273 (288)
                      .++.+++ .|+ +++++.    .++...+.+++    .+... +......    ......+  ++|+|+.+.....    
T Consensus       173 lai~aa~-~g~~~V~avD----id~~al~~a~~n~~~n~~~~~~~~~~~~----~~~~~~~--~fDlVvan~~~~~l~~l  241 (288)
T TIGR00406       173 LSIAALK-LGAAKVVGID----IDPLAVESARKNAELNQVSDRLQVKLIY----LEQPIEG--KADVIVANILAEVIKEL  241 (288)
T ss_pred             HHHHHHH-cCCCeEEEEE----CCHHHHHHHHHHHHHcCCCcceEEEecc----cccccCC--CceEEEEecCHHHHHHH
Confidence            7777665 465 676665    46666665542    22221 1111110    1111222  5999987654432    


Q ss_pred             HHHHHhhccCCCeeC
Q 023007          274 ASKVLKFLRFREEQW  288 (288)
Q Consensus       274 ~~~a~~~l~~~G~~v  288 (288)
                      +..+.++|+|+|.++
T Consensus       242 l~~~~~~LkpgG~li  256 (288)
T TIGR00406       242 YPQFSRLVKPGGWLI  256 (288)
T ss_pred             HHHHHHHcCCCcEEE
Confidence            266789999999874

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.74  E-value=0.013  Score=53.13  Aligned_cols=87  Identities=17%  Similarity=0.117  Sum_probs=59.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCC--CCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLG--ADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .+|+|+|+ |.+|+.+++.+.+.| .+|++..    ++.++.+.+....  --.....+..+.+.+.++.++   .|+||
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAd----Rs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~---~d~VI   73 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIAD----RSKEKCARIAELIGGKVEALQVDAADVDALVALIKD---FDLVI   73 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEe----CCHHHHHHHHhhccccceeEEecccChHHHHHHHhc---CCEEE
Confidence            57999999 999999999988888 7888888    5667766665443  111222223334567777775   79999


Q ss_pred             ECCCcccHHHHH-hhccCC
Q 023007          267 NCVGGNSASKVL-KFLRFR  284 (288)
Q Consensus       267 d~~g~~~~~~a~-~~l~~~  284 (288)
                      +|.+......++ .|++.+
T Consensus        74 n~~p~~~~~~i~ka~i~~g   92 (389)
T COG1748          74 NAAPPFVDLTILKACIKTG   92 (389)
T ss_pred             EeCCchhhHHHHHHHHHhC
Confidence            999987764444 455444

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.0083  Score=51.28  Aligned_cols=80  Identities=24%  Similarity=0.266  Sum_probs=49.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHH----HHHhCCCCEE---EeCCcc-cHHHHHHHh-c
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKE----KLKGLGADEV---FTESQL-EVKNVKGLL-A  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~----~~~~~g~~~v---~~~~~~-~~~~i~~~~-~  257 (288)
                      .+++++|+|++|++|...++.+...|++ |+++.+    ++++..    .+++.+....   .|-.+. .++.+.+.. .
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGR----NAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADE   80 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcC----CHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999 777764    333322    3344443321   222221 122222211 1


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..+++|++|+|.|.
T Consensus        81 ~~g~id~li~~ag~   94 (260)
T PRK06198         81 AFGRLDALVNAAGL   94 (260)
T ss_pred             HhCCCCEEEECCCc
Confidence            22359999999985

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=96.72  E-value=0.014  Score=47.44  Aligned_cols=79  Identities=24%  Similarity=0.334  Sum_probs=56.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC--CEEEe----CCcccHHH-HHHHhcCCCCc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA--DEVFT----ESQLEVKN-VKGLLANLPEP  262 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~--~~v~~----~~~~~~~~-i~~~~~~~g~~  262 (288)
                      +-.+|+|++.++|.+..+.+...|+++++...+   ++...+.++.++.  +|.-.    +++.+++. +.+..+.+|.+
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~---~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLD---SAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecc---hhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            567899999999999999999999999988743   4445556677776  44311    22334444 55555556679


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      ++++||.|-
T Consensus        92 svlVncAGI  100 (256)
T KOG1200|consen   92 SVLVNCAGI  100 (256)
T ss_pred             cEEEEcCcc
Confidence            999999995

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.71  E-value=0.0089  Score=50.69  Aligned_cols=80  Identities=18%  Similarity=0.191  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC-EEEeCCccc---HHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVFTESQLE---VKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~-~v~~~~~~~---~~~-i~~~~~~  258 (288)
                      +++++||+|++|.+|...++.+...|++|+.+.+    +.++.+.    +++.+.. .++..+-.+   ++. +.+..+.
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   77 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL----NREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA   77 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC----CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999998874    3443332    2333322 222222112   222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|.+.|.
T Consensus        78 ~~~~d~vi~~ag~   90 (250)
T TIGR03206        78 LGPVDVLVNNAGW   90 (250)
T ss_pred             cCCCCEEEECCCC
Confidence            3359999999973

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.71  E-value=0.017  Score=53.01  Aligned_cols=77  Identities=13%  Similarity=0.229  Sum_probs=49.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCC-EEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      +|++++|+|++|++|.+.++.+...|++|+++.+    ++++.+ .....+.. ..+..+-.+.+.+.+..+   ++|++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r----~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~---~IDiL  249 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTS----NSDKITLEINGEDLPVKTLHWQVGQEAALAELLE---KVDIL  249 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhC---CCCEE
Confidence            4789999999999999999888888999999874    444432 22221111 122211122334444433   49999


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      |++.|.
T Consensus       250 InnAGi  255 (406)
T PRK07424        250 IINHGI  255 (406)
T ss_pred             EECCCc
Confidence            999874

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.70  E-value=0.025  Score=52.24  Aligned_cols=143  Identities=15%  Similarity=0.211  Sum_probs=85.6

Q ss_pred             cccccceEEEEEEecCCCCCCCCCCEEE-ecCC---------------CCcccceEEEeeCCcEEE---c-CCCCChhhh
Q 023007          107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI-PSPP---------------SSGTWQSYVVKDQSVWHK---V-SKDSPMEYA  166 (288)
Q Consensus       107 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V~-~~~~---------------~~G~~a~~~~~~~~~l~~---i-p~~~~~~~a  166 (288)
                      ..-|.|+++.+.+++++++..-.|+.-+ +.+.               ..+.|++++.++. .+..   + +..++... 
T Consensus        88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~-  165 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISS-  165 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHH-
Confidence            3468888898988888887655555322 1110               0556777776665 2221   2 11222111 


Q ss_pred             cccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHH-HHHHhCCCCEEEeC
Q 023007          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAK-EKLKGLGADEVFTE  244 (288)
Q Consensus       167 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~-~~~~~~g~~~v~~~  244 (288)
                              .|.....+.....++++|+|+|+ |.+|..+++.++..|+ +++++.    .+.++. ++++++|... +..
T Consensus       166 --------~Av~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~----rs~~ra~~la~~~g~~~-i~~  231 (417)
T TIGR01035       166 --------AAVELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIAN----RTYERAEDLAKELGGEA-VKF  231 (417)
T ss_pred             --------HHHHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHcCCeE-eeH
Confidence                    11111222234467899999999 9999999999999994 666666    455554 4666777532 221


Q ss_pred             CcccHHHHHHHhcCCCCccEEEECCCccc
Q 023007          245 SQLEVKNVKGLLANLPEPALGFNCVGGNS  273 (288)
Q Consensus       245 ~~~~~~~i~~~~~~~g~~D~v~d~~g~~~  273 (288)
                           +.+.+...   ++|+||+|++.+.
T Consensus       232 -----~~l~~~l~---~aDvVi~aT~s~~  252 (417)
T TIGR01035       232 -----EDLEEYLA---EADIVISSTGAPH  252 (417)
T ss_pred             -----HHHHHHHh---hCCEEEECCCCCC
Confidence                 22333333   3999999998754

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.70  E-value=0.028  Score=42.85  Aligned_cols=90  Identities=14%  Similarity=0.196  Sum_probs=59.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHH-HHHHHhCCCCEEEeCCcccHHH-----------------
Q 023007          192 IVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKN-----------------  251 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~-----------------  251 (288)
                      |.|+|+||.+|..+.++.+...  ++++..+..  ++-++ .+.+++|.+..+...++...+.                 
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~--~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G   78 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAG--SNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSG   78 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEES--STHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEES
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcC--CCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeC
Confidence            6799999999999999999997  788888754  34444 4566889999887766543222                 


Q ss_pred             ---HHHHhcCCCCccEEEECCCccc-HHHHHhhccCC
Q 023007          252 ---VKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR  284 (288)
Q Consensus       252 ---i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~  284 (288)
                         +.++.... ++|+|++..-+-. +...+..++.+
T Consensus        79 ~~~l~~~~~~~-~~D~vv~Ai~G~aGL~pt~~Ai~~g  114 (129)
T PF02670_consen   79 PEGLEELAEEP-EVDIVVNAIVGFAGLKPTLAAIKAG  114 (129)
T ss_dssp             HHHHHHHHTHT-T-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred             hHHHHHHhcCC-CCCEEEEeCcccchHHHHHHHHHCC
Confidence               33333322 4999999875544 47777766655

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.70  E-value=0.011  Score=50.89  Aligned_cols=83  Identities=13%  Similarity=0.154  Sum_probs=49.4

Q ss_pred             CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE--eCCc-ccHHHH-HHHhcCCC
Q 023007          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF--TESQ-LEVKNV-KGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~--~~~~-~~~~~i-~~~~~~~g  260 (288)
                      ++++++|+|+  ++++|.+.++.+...|++|+.+.+.. ..+++.+.+ ++++....+  |-.+ ..++.+ .......|
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            4789999996  57999998888888999998864221 223443333 344533222  2111 122222 22222234


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        84 ~iD~lvnnAG~   94 (260)
T PRK06997         84 GLDGLVHSIGF   94 (260)
T ss_pred             CCcEEEEcccc
Confidence            69999999874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.69  E-value=0.012  Score=50.06  Aligned_cols=80  Identities=18%  Similarity=0.155  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcc---cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQL---EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|.+|...++.+...|++|+++.+    ++++.+    .++..+... ++.-+-.   .++. +.+....
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADL----NDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET   78 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999988888999999985    334332    223334321 2222111   1211 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|.|+|.
T Consensus        79 ~~~~d~vi~~a~~   91 (258)
T PRK12429         79 FGGVDILVNNAGI   91 (258)
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999874

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.69  E-value=0.0079  Score=51.03  Aligned_cols=81  Identities=16%  Similarity=0.189  Sum_probs=48.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEE-EeCCcccHHH----HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-FTESQLEVKN----VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v-~~~~~~~~~~----i~~~~~~  258 (288)
                      ++++++|+|++|++|...+..+...|++|+++..   .+.++.    +.++..+.... +..+-.+.+.    +.+....
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~---r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYA---RSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999877532   233333    22334443322 2111111122    2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        80 ~~~id~vi~~ag~   92 (250)
T PRK08063         80 FGRLDVFVNNAAS   92 (250)
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999874

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=96.69  E-value=0.012  Score=51.11  Aligned_cols=83  Identities=23%  Similarity=0.285  Sum_probs=53.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC---E---EEeCC-cccHHH-HHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD---E---VFTES-QLEVKN-VKG  254 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~---~---v~~~~-~~~~~~-i~~  254 (288)
                      -.|+.++|+|++.++|.+.+..+...|++|+++.+    ++++.+..    ...+..   .   ..|-. +.+.+. +..
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGR----SEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            46789999999999999999999999999999984    55554332    233332   1   12221 222222 222


Q ss_pred             HhcC-CCCccEEEECCCccc
Q 023007          255 LLAN-LPEPALGFNCVGGNS  273 (288)
Q Consensus       255 ~~~~-~g~~D~v~d~~g~~~  273 (288)
                      .... .|++|+.+++.|...
T Consensus        82 ~~~~~~GkidiLvnnag~~~  101 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALG  101 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCC
Confidence            2223 347999999988533

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.69  E-value=0.011  Score=52.14  Aligned_cols=83  Identities=18%  Similarity=0.152  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-CHHHHHHHHhCCCCEEEeC-C--c-ccHHHHHHH-hcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLKGLGADEVFTE-S--Q-LEVKNVKGL-LANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~~~~g~~~v~~~-~--~-~~~~~i~~~-~~~~g~  261 (288)
                      +|++++|+|+++++|...++.+...|++|++....... .++..+.++..|....... +  + ..++.+.+. .. .|+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCC
Confidence            56899999999999999888888889999887632110 1111233344454322221 1  1 112222221 22 346


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        90 iD~li~nAG~   99 (306)
T PRK07792         90 LDIVVNNAGI   99 (306)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.012  Score=50.15  Aligned_cols=34  Identities=21%  Similarity=0.253  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|++|++|...++.+...|++|+.+.+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r   38 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGR   38 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            4789999999999999999998889999999884

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.67  E-value=0.017  Score=49.90  Aligned_cols=78  Identities=21%  Similarity=0.208  Sum_probs=49.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCC-EE--EeCCcc-cHHH-HHHHhcCCCCcc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EV--FTESQL-EVKN-VKGLLANLPEPA  263 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~-~v--~~~~~~-~~~~-i~~~~~~~g~~D  263 (288)
                      +++||+|++|.+|...++.+...|++|+++.    .++++.+.+++ ++.. .+  .|-.+. .++. +.+..+..+++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATV----RRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999988888899999998    45666555433 2322 11  222211 1111 222222223599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|+|.|.
T Consensus        79 ~vi~~ag~   86 (276)
T PRK06482         79 VVVSNAGY   86 (276)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.66  E-value=0.0091  Score=49.84  Aligned_cols=95  Identities=19%  Similarity=0.149  Sum_probs=60.4

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKNVK  253 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~i~  253 (288)
                      ....+++|++||-+|+  +.|..+..+++..+  .+|+.+.    .+++..+.++    +.|...+  +..+...  .  
T Consensus        70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE----~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~--~--  139 (212)
T PRK13942         70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIE----RIPELAEKAKKTLKKLGYDNVEVIVGDGTL--G--  139 (212)
T ss_pred             HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHHHHcCCCCeEEEECCccc--C--
Confidence            4467899999999988  55777777777765  5788776    4666665553    4554332  2211110  0  


Q ss_pred             HHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                       +... +.+|+|+-....+.. ...++.|+++|+++
T Consensus       140 -~~~~-~~fD~I~~~~~~~~~~~~l~~~LkpgG~lv  173 (212)
T PRK13942        140 -YEEN-APYDRIYVTAAGPDIPKPLIEQLKDGGIMV  173 (212)
T ss_pred             -CCcC-CCcCEEEECCCcccchHHHHHhhCCCcEEE
Confidence             1112 249998765544444 77889999999975

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.02  Score=47.64  Aligned_cols=78  Identities=14%  Similarity=0.101  Sum_probs=50.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .++++|+|++|.+|...+..+... ++|+++.+    +.++.+.+. .+..-+++..+-.+.+.+.++....+++|.+|.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   77 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGR----PAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH   77 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeC----CHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence            368999999999999988777766 89999984    444444333 222122333222233455555544334999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      +.|.
T Consensus        78 ~ag~   81 (227)
T PRK08219         78 NAGV   81 (227)
T ss_pred             CCCc
Confidence            9875

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.017  Score=50.04  Aligned_cols=79  Identities=15%  Similarity=0.133  Sum_probs=49.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCC-EEEeCCcccHHH----HHHHhcCCCCc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD-EVFTESQLEVKN----VKGLLANLPEP  262 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~----i~~~~~~~g~~  262 (288)
                      +++++|+|++|++|...++.+...|++|+.+.+    ++++.+.+. .++.. ..+..+-.+.+.    +....+..+++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATAR----DTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999888888999998884    455544433 33322 122211111112    22222222359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|.|.|.
T Consensus        79 d~vi~~ag~   87 (275)
T PRK08263         79 DIVVNNAGY   87 (275)
T ss_pred             CEEEECCCC
Confidence            999999985

>PRK09186 flagellin modification protein A; Provisional

Probab=96.64  E-value=0.0081  Score=51.18  Aligned_cols=34  Identities=21%  Similarity=0.331  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ++++++|+|++|++|...+..+...|++|+.+.+
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r   36 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADI   36 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec
Confidence            4789999999999999999999999999999874

>PRK06398 aldose dehydrogenase; Validated

Probab=96.64  E-value=0.0029  Score=54.35  Aligned_cols=34  Identities=15%  Similarity=0.309  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +|++++|+|+++++|...+..+...|++|+.+.+
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r   38 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDI   38 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            4689999999999999999999999999998874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.64  E-value=0.015  Score=49.88  Aligned_cols=83  Identities=11%  Similarity=0.134  Sum_probs=49.8

Q ss_pred             CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCC-CCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG-ADE-VF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g-~~~-v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|++  +++|.+.++.+...|++|+.+.+.. ..+++.+.+ +++. ... .+  |-.+ ..++. +.+....
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE-RLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc-cchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            47899999997  7999998888888999999876432 233344333 3442 221 11  2111 12222 2222223


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus        85 ~g~ld~lv~nag~   97 (257)
T PRK08594         85 VGVIHGVAHCIAF   97 (257)
T ss_pred             CCCccEEEECccc
Confidence            3469999999873

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.64  E-value=0.014  Score=50.13  Aligned_cols=80  Identities=16%  Similarity=0.140  Sum_probs=49.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcc---cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQL---EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~  258 (288)
                      ++++++|+|+++++|...+..+...|++++++.+    ++++.+    .+++.+... .+..+-.   .++. +.+....
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDI----NQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            5689999999999999988888888999988864    444332    233444332 1221111   1222 1222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus        85 ~~~id~li~~ag~   97 (265)
T PRK07097         85 VGVIDILVNNAGI   97 (265)
T ss_pred             CCCCCEEEECCCC
Confidence            2359999999884

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.64  E-value=0.016  Score=51.37  Aligned_cols=40  Identities=28%  Similarity=0.338  Sum_probs=33.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE  231 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  231 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+    ++++.+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r----~~~~~~   44 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACR----NLKKAE   44 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC----CHHHHH
Confidence            4689999999999999999888888999999884    455443

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.64  E-value=0.013  Score=50.12  Aligned_cols=80  Identities=19%  Similarity=0.226  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCcc-cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQL-EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~  258 (288)
                      .+++++|+|+++++|...+..+...|++++++.+    ++++.+.    ++..+.+. ++  |-.+. .++. +......
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDI----NADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999988889999998874    4444332    23334332 22  22221 1222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus        86 ~~~~d~li~~ag~   98 (255)
T PRK06113         86 LGKVDILVNNAGG   98 (255)
T ss_pred             cCCCCEEEECCCC
Confidence            3359999999874

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.63  E-value=0.0065  Score=51.58  Aligned_cols=36  Identities=22%  Similarity=0.179  Sum_probs=32.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ..++++++|+|++|.+|...++.+...|++|+++.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r   44 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGR   44 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeC
Confidence            457899999999999999988888888999998884

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.63  E-value=0.0092  Score=51.05  Aligned_cols=83  Identities=18%  Similarity=0.270  Sum_probs=49.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE---EeCCcc-cHH-HHHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV---FTESQL-EVK-NVKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v---~~~~~~-~~~-~i~~~~~~~g~~  262 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+.. ..++..+.++..+.+..   .|-.+. .++ .+.+.....+++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999998888999999887421 01111122333343321   222221 122 222222223359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|++.|.
T Consensus        86 d~lv~nAg~   94 (260)
T PRK12823         86 DVLINNVGG   94 (260)
T ss_pred             eEEEECCcc
Confidence            999999973

>PRK09242 tropinone reductase; Provisional

Probab=96.62  E-value=0.011  Score=50.52  Aligned_cols=34  Identities=21%  Similarity=0.295  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++++|+|++|++|...++.+...|++++++.+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r   41 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVAR   41 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC
Confidence            4789999999999999999999999999999884

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=96.62  E-value=0.021  Score=49.67  Aligned_cols=81  Identities=22%  Similarity=0.251  Sum_probs=58.7

Q ss_pred             CCCCeEEEeCCCChHHHH-HHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-----hCCCC---EEEeCCccc--HHHHHHH
Q 023007          187 NSGDSIVQNGATSIVGQC-IIQIARHRGIHSINIIRDRAGSDEAKEKLK-----GLGAD---EVFTESQLE--VKNVKGL  255 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~-a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-----~~g~~---~v~~~~~~~--~~~i~~~  255 (288)
                      +-|++.+|+|++.++|-+ |-++|+ .|.+|+.+.    ++++|++..+     +.++.   .++|....+  .+.+++.
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIs----Rt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~  121 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLIS----RTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEK  121 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEe----CCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHH
Confidence            457899999999999976 555555 899999999    5788886553     33422   345655444  6788888


Q ss_pred             hcCCCCccEEEECCCccc
Q 023007          256 LANLPEPALGFNCVGGNS  273 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~~  273 (288)
                      +.+-. +-+.+||+|-..
T Consensus       122 l~~~~-VgILVNNvG~~~  138 (312)
T KOG1014|consen  122 LAGLD-VGILVNNVGMSY  138 (312)
T ss_pred             hcCCc-eEEEEecccccC
Confidence            87744 778999999633

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.60  E-value=0.021  Score=50.63  Aligned_cols=73  Identities=19%  Similarity=0.211  Sum_probs=50.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      +|+|+|++|-+|...++.+...|.+|+++++    +.++...+...+.+.+. .+-.+.+.+.+...+   +|+||++.+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R----~~~~~~~l~~~~v~~v~-~Dl~d~~~l~~al~g---~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVR----NLRKASFLKEWGAELVY-GDLSLPETLPPSFKG---VTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEc----ChHHhhhHhhcCCEEEE-CCCCCHHHHHHHHCC---CCEEEECCC
Confidence            6999999999999999999889999999985    44444444445554332 121223345454443   999999876


Q ss_pred             c
Q 023007          271 G  271 (288)
Q Consensus       271 ~  271 (288)
                      .
T Consensus        74 ~   74 (317)
T CHL00194         74 S   74 (317)
T ss_pred             C
Confidence            3

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.59  E-value=0.015  Score=49.68  Aligned_cols=80  Identities=19%  Similarity=0.191  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|++|...+..+...|++|+.+.+    ++++.+.    +++.+... .+  |-.+ ..+.. +......
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGR----NAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeC----CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999888888999999984    4443322    23344321 22  2211 12222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|.+.|.
T Consensus        86 ~~~id~vi~~ag~   98 (256)
T PRK06124         86 HGRLDILVNNVGA   98 (256)
T ss_pred             cCCCCEEEECCCC
Confidence            3359999999884

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.58  E-value=0.023  Score=45.93  Aligned_cols=95  Identities=23%  Similarity=0.200  Sum_probs=63.8

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHHHHHhcC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLAN  258 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i~~~~~~  258 (288)
                      ..+++|+.++=.|+  +.|..+++++... ..+++++.    .+++..+..    ++||.+.+..-..+..+.+.    +
T Consensus        30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe----~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~----~   99 (187)
T COG2242          30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIE----RDEEALELIERNAARFGVDNLEVVEGDAPEALP----D   99 (187)
T ss_pred             hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEe----cCHHHHHHHHHHHHHhCCCcEEEEeccchHhhc----C
Confidence            56899998887887  4566677777433 46899998    567777655    47888754333322222322    2


Q ss_pred             CCCccEEEECCCccc---HHHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCVGGNS---ASKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~g~~~---~~~a~~~l~~~G~~v  288 (288)
                      ...+|.+|---|...   ++.++..|+++||+|
T Consensus       100 ~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV  132 (187)
T COG2242         100 LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLV  132 (187)
T ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEE
Confidence            213899987666432   399999999999986

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.58  E-value=0.032  Score=50.54  Aligned_cols=85  Identities=14%  Similarity=0.196  Sum_probs=51.3

Q ss_pred             CCCCeEEEeCCCChHHHH--HHHHHHHcCCeEEEEEcCCCCCHH------------HHHHHHhCCCCE-EEeCCcc---c
Q 023007          187 NSGDSIVQNGATSIVGQC--IIQIARHRGIHSINIIRDRAGSDE------------AKEKLKGLGADE-VFTESQL---E  248 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~--a~~la~~~g~~vi~~~~~~~~~~~------------~~~~~~~~g~~~-v~~~~~~---~  248 (288)
                      ..|+++||+|+++++|++  .++.+ ..|++++++.......+.            -.+.+++.|... .++-+..   .
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            456899999999999999  55666 889998888632111111            123455667542 2332221   2


Q ss_pred             HHH-HHHHhcCCCCccEEEECCCcc
Q 023007          249 VKN-VKGLLANLPEPALGFNCVGGN  272 (288)
Q Consensus       249 ~~~-i~~~~~~~g~~D~v~d~~g~~  272 (288)
                      .+. +.+.....|++|+++++.+..
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence            222 222223345699999998865

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.57  E-value=0.014  Score=49.99  Aligned_cols=80  Identities=15%  Similarity=0.216  Sum_probs=48.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----H-hCCCC-EEE--eCCc-ccHHHH-HHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----K-GLGAD-EVF--TESQ-LEVKNV-KGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~-~~g~~-~v~--~~~~-~~~~~i-~~~~~  257 (288)
                      ++++++|+|+++++|.+.+..+...|++|+.+.+.   ++++.+.+    + ..+.. ..+  |-.+ ..++.+ .+...
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS---NVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999888999999887542   33333222    2 22332 122  2211 122222 22222


Q ss_pred             CCCCccEEEECCC
Q 023007          258 NLPEPALGFNCVG  270 (288)
Q Consensus       258 ~~g~~D~v~d~~g  270 (288)
                      ..+++|++|++.|
T Consensus        84 ~~g~id~lv~nAg   96 (260)
T PRK08416         84 DFDRVDFFISNAI   96 (260)
T ss_pred             hcCCccEEEECcc
Confidence            2346999999986

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.55  E-value=0.01  Score=49.24  Aligned_cols=95  Identities=13%  Similarity=0.004  Sum_probs=60.2

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCcccHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNV  252 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~i  252 (288)
                      +...++++++||=.|+  +.|..++.+++..+  .+|+.+.    .+++..+.++    +.+..   .++..+..  +.+
T Consensus        66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD----~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~--~~~  137 (205)
T PRK13944         66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVE----IVKELAIYAAQNIERLGYWGVVEVYHGDGK--RGL  137 (205)
T ss_pred             HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHHHHcCCCCcEEEEECCcc--cCC
Confidence            4467889999999888  55777777777764  5788777    4666555443    45543   22222111  011


Q ss_pred             HHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                         ... +.+|+|+-+...... +..++.|++||+++
T Consensus       138 ---~~~-~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lv  170 (205)
T PRK13944        138 ---EKH-APFDAIIVTAAASTIPSALVRQLKDGGVLV  170 (205)
T ss_pred             ---ccC-CCccEEEEccCcchhhHHHHHhcCcCcEEE
Confidence               111 249998877665554 78889999999975

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=96.54  E-value=0.021  Score=50.42  Aligned_cols=80  Identities=19%  Similarity=0.351  Sum_probs=56.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC----EEEeCCcccHHHHHHHhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD----EVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      .+.+|+|+||+|-+|.+.+..+...|++|.+++++.. ++++.+++++|...    .++..+-.+.+.+....+|   +|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~-~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g---cd   80 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPE-DEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG---CD   80 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcc-hhhhHHHHHhcccCcccceEEeccccccchHHHHHhC---CC
Confidence            5789999999999999999999999999999998763 45556678777621    1222221222344444443   99


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      .||-+...
T Consensus        81 gVfH~Asp   88 (327)
T KOG1502|consen   81 GVFHTASP   88 (327)
T ss_pred             EEEEeCcc
Confidence            99987654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=96.53  E-value=0.024  Score=50.30  Aligned_cols=82  Identities=17%  Similarity=0.246  Sum_probs=49.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC---CEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA---DEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      ..++++||+|++|.+|...+..+...|++|+++.+.....++........+.   -.++..+-.+.+.+.++..+   +|
T Consensus         3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d   79 (325)
T PLN02989          3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDG---CE   79 (325)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcC---CC
Confidence            3578999999999999999999988999998877542211111111111121   11221111122344444443   99


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      +||+|+|.
T Consensus        80 ~vih~A~~   87 (325)
T PLN02989         80 TVFHTASP   87 (325)
T ss_pred             EEEEeCCC
Confidence            99999874

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.52  E-value=0.018  Score=49.14  Aligned_cols=33  Identities=12%  Similarity=0.048  Sum_probs=29.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +++++|+|++|.+|...++.+...|++++.+.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r   34 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADI   34 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence            578999999999999999888888999988874

>PRK12743 oxidoreductase; Provisional

Probab=96.52  E-value=0.015  Score=49.63  Aligned_cols=80  Identities=16%  Similarity=0.204  Sum_probs=49.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCC-EEE--eCCc-ccHHH-HHHHhcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVF--TESQ-LEVKN-VKGLLANL  259 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~-~v~--~~~~-~~~~~-i~~~~~~~  259 (288)
                      +++++|+|+++++|...++.+...|++|+.+.+.   +.++.    +.++..+.. +++  |-.+ ..++. +.+.....
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHS---DEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC---ChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999887642   22222    233445533 222  2111 11222 22222222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|.|.|.
T Consensus        79 ~~id~li~~ag~   90 (256)
T PRK12743         79 GRIDVLVNNAGA   90 (256)
T ss_pred             CCCCEEEECCCC
Confidence            359999999874

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.023  Score=48.69  Aligned_cols=80  Identities=20%  Similarity=0.183  Sum_probs=49.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH---HHhCCCCE-EEeCCcc---cHHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK---LKGLGADE-VFTESQL---EVKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~~~~g~~~-v~~~~~~---~~~~-i~~~~~~~  259 (288)
                      ++++++|+|++|++|...++.+...|++|+.+.+    +++..+.   +...+... .+..+-.   .++. +.+..+..
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDI----SPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC----CHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999998889999988874    3332222   22333221 2211111   1222 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|.+.|.
T Consensus        81 ~~id~vi~~ag~   92 (263)
T PRK08226         81 GRIDILVNNAGV   92 (263)
T ss_pred             CCCCEEEECCCc
Confidence            459999999884

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.50  E-value=0.014  Score=55.15  Aligned_cols=75  Identities=20%  Similarity=0.246  Sum_probs=53.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      +.+|++|+|+|. |..|++++++++..|++|+++.    ..+.+.+.++++|...+...+.  .+.+    .   .+|+|
T Consensus         9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D----~~~~~~~~l~~~g~~~~~~~~~--~~~l----~---~~D~V   74 (488)
T PRK03369          9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCD----DDPDALRPHAERGVATVSTSDA--VQQI----A---DYALV   74 (488)
T ss_pred             ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHhCCCEEEcCcch--HhHh----h---cCCEE
Confidence            567899999999 9999999999999999999865    2444555567778743322111  1222    1   38999


Q ss_pred             EECCCcccH
Q 023007          266 FNCVGGNSA  274 (288)
Q Consensus       266 ~d~~g~~~~  274 (288)
                      |.+.|-+..
T Consensus        75 V~SpGi~~~   83 (488)
T PRK03369         75 VTSPGFRPT   83 (488)
T ss_pred             EECCCCCCC
Confidence            999987654

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.49  E-value=0.0023  Score=53.21  Aligned_cols=98  Identities=16%  Similarity=0.135  Sum_probs=59.9

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHH----HhCCCCEE-EeCCcccHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADEV-FTESQLEVKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~i  252 (288)
                      +.+...+++|++||-+|+  +.|..++-+++..|.  +|+.+.    ..++..+.+    +.++.+.+ +...+.. .  
T Consensus        64 ~l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE----~~~~l~~~A~~~l~~~~~~nv~~~~gdg~-~--  134 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVE----RDPELAERARRNLARLGIDNVEVVVGDGS-E--  134 (209)
T ss_dssp             HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEE----SBHHHHHHHHHHHHHHTTHSEEEEES-GG-G--
T ss_pred             HHHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEEC----ccHHHHHHHHHHHHHhccCceeEEEcchh-h--
Confidence            334577999999999988  557777778887774  567666    345544433    45665433 1111211 0  


Q ss_pred             HHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                       -+... +.||.|+-+.+-+.. ...++.|++||++|
T Consensus       135 -g~~~~-apfD~I~v~~a~~~ip~~l~~qL~~gGrLV  169 (209)
T PF01135_consen  135 -GWPEE-APFDRIIVTAAVPEIPEALLEQLKPGGRLV  169 (209)
T ss_dssp             -TTGGG--SEEEEEESSBBSS--HHHHHTEEEEEEEE
T ss_pred             -ccccC-CCcCEEEEeeccchHHHHHHHhcCCCcEEE
Confidence             11112 249999988887776 77789999999985

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.029  Score=46.76  Aligned_cols=77  Identities=18%  Similarity=0.223  Sum_probs=50.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHHHHHHhcCCCCccEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      ++++|+|++|++|...++.+...|++++.+.    .+++..+.++..+...+ .|-.+ ..++.+.....+. ++|++|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~----r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATA----RDAAALAALQALGAEALALDVADPASVAGLAWKLDGE-ALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEE----CCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCC-CCCEEEE
Confidence            4799999999999998888888899999987    35555555555554321 22211 1222322222222 4999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      +.|.
T Consensus        77 ~ag~   80 (222)
T PRK06953         77 VAGV   80 (222)
T ss_pred             CCCc
Confidence            9875

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.49  E-value=0.066  Score=42.43  Aligned_cols=93  Identities=13%  Similarity=0.095  Sum_probs=58.1

Q ss_pred             HHHHHHhhc-CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007          176 ALRMLEDFT-TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       176 a~~~l~~~~-~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~  254 (288)
                      .+.++.+.. ..-.|++++|.|= |.+|...++.++.+|++|+++.    .++-+.-.+..-|++. .        .+.+
T Consensus         9 ~~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e----~DPi~alqA~~dGf~v-~--------~~~~   74 (162)
T PF00670_consen    9 LVDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTE----IDPIRALQAAMDGFEV-M--------TLEE   74 (162)
T ss_dssp             HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-----SSHHHHHHHHHTT-EE-E---------HHH
T ss_pred             HHHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEE----CChHHHHHhhhcCcEe-c--------CHHH
Confidence            344444333 3568999999999 9999999999999999999997    4666655555556532 1        2223


Q ss_pred             HhcCCCCccEEEECCCcccH--HHHHhhccCCC
Q 023007          255 LLANLPEPALGFNCVGGNSA--SKVLKFLRFRE  285 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G  285 (288)
                      ...   ..|++|.++|....  ..-++.|+++-
T Consensus        75 a~~---~adi~vtaTG~~~vi~~e~~~~mkdga  104 (162)
T PF00670_consen   75 ALR---DADIFVTATGNKDVITGEHFRQMKDGA  104 (162)
T ss_dssp             HTT---T-SEEEE-SSSSSSB-HHHHHHS-TTE
T ss_pred             HHh---hCCEEEECCCCccccCHHHHHHhcCCe
Confidence            333   38999999998764  67778887764

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.019  Score=49.43  Aligned_cols=78  Identities=17%  Similarity=0.121  Sum_probs=47.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-EeCC--c-ccHHHHH-HHhcCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTES--Q-LEVKNVK-GLLANLP  260 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~~~~--~-~~~~~i~-~~~~~~g  260 (288)
                      ++++|+|++|++|...++.+...|++|+++.+    +.++.+    .++..+.+.. +..+  + ..++.+. ......+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   76 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADV----NEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWG   76 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            37999999999999988888888999998884    344333    2333343322 2111  1 1122211 1222223


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|++.|.
T Consensus        77 ~id~lI~~ag~   87 (270)
T PRK05650         77 GIDVIVNNAGV   87 (270)
T ss_pred             CCCEEEECCCC
Confidence            59999999884

>PRK06484 short chain dehydrogenase; Validated

Probab=96.47  E-value=0.018  Score=54.68  Aligned_cols=80  Identities=18%  Similarity=0.199  Sum_probs=52.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEE---EeCCc-ccHHHH-HHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV---FTESQ-LEVKNV-KGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v---~~~~~-~~~~~i-~~~~~~~g~  261 (288)
                      ++++++|+|+++++|.+.++.+...|++|+.+.+    +.++.+ ..++++....   .|-.+ ..++.+ .+.....++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR----NVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999874    455544 3445654322   22221 122222 222222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        80 iD~li~nag~   89 (520)
T PRK06484         80 IDVLVNNAGV   89 (520)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.019  Score=49.64  Aligned_cols=80  Identities=20%  Similarity=0.176  Sum_probs=48.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcccHHHHHHH----hcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVKGL----LAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~~~~~i~~~----~~~  258 (288)
                      +.++++|+|++|.+|...++.+...|++|+++.+    +.++.+    .++..+... ++..+-.+.+.+..+    ...
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGAR----RVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            3468999999999999999888888999988874    333332    223334332 122221122222221    111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|.+.|.
T Consensus        85 ~~~id~vi~~Ag~   97 (274)
T PRK07775         85 LGEIEVLVSGAGD   97 (274)
T ss_pred             cCCCCEEEECCCc
Confidence            2359999999975

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.012  Score=49.91  Aligned_cols=79  Identities=18%  Similarity=0.106  Sum_probs=48.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhC--CCC-EEE--eCCcc-cHHH-HHHHhc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGL--GAD-EVF--TESQL-EVKN-VKGLLA  257 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~--g~~-~v~--~~~~~-~~~~-i~~~~~  257 (288)
                      +++++|+|++|++|...++-+...|++|+.+.+    ++++.+.+    .+.  +.. +++  |..+. .++. +.+...
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCAR----RTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD   77 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence            578999999999999988888888999998884    44444332    111  211 122  22221 1222 222222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..+++|++|++.|.
T Consensus        78 ~~~~id~vi~~ag~   91 (248)
T PRK08251         78 ELGGLDRVIVNAGI   91 (248)
T ss_pred             HcCCCCEEEECCCc
Confidence            23359999999873

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.45  E-value=0.018  Score=49.33  Aligned_cols=81  Identities=16%  Similarity=0.236  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCE-EE--eCCcc-cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VF--TESQL-EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++++++.+.   +++..    +.++..+... ++  |-.+. .+.. +......
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~---~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS---DEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999887642   22222    2233344321 12  22221 1222 2222233


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|+++++.|.
T Consensus        83 ~g~id~lv~~ag~   95 (261)
T PRK08936         83 FGTLDVMINNAGI   95 (261)
T ss_pred             cCCCCEEEECCCC
Confidence            3469999999884

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.45  E-value=0.029  Score=47.26  Aligned_cols=80  Identities=24%  Similarity=0.221  Sum_probs=49.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EEEeCCcccHHHHH----HHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVFTESQLEVKNVK----GLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~i~----~~~~~~g~  261 (288)
                      ++++++|+|++|.+|...++.+...|+.|+...    .+.++.+.+ ..++.. .++..+-.+.+.+.    +.....++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHG----TRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG   80 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999988888899887776    344444433 344432 12221111112222    22222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        81 id~vi~~ag~   90 (245)
T PRK12936         81 VDILVNNAGI   90 (245)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.45  E-value=0.019  Score=48.98  Aligned_cols=80  Identities=13%  Similarity=0.110  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EEEeCC--c-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVFTES--Q-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v~~~~--~-~~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|++|++|...++.+...|++|+.+.+    +.++.+.+ ++++.. ..+..+  + ..++. +.......++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADI----KPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGG   80 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcC----CHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3679999999999999999999989999998874    45544433 334322 112111  1 11222 2222222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        81 id~li~~ag~   90 (257)
T PRK07067         81 IDILFNNAAL   90 (257)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.45  E-value=0.02  Score=42.84  Aligned_cols=95  Identities=21%  Similarity=0.175  Sum_probs=59.7

Q ss_pred             hcCCCCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHHHHHH
Q 023007          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKNVKGL  255 (288)
Q Consensus       183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~i~~~  255 (288)
                      ...+.++++|+-+|+ |. |..+..+++..+ .+++++.    .++...+.++    .++...+  +..+...  .....
T Consensus        14 ~~~~~~~~~vldlG~-G~-G~~~~~l~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~   85 (124)
T TIGR02469        14 KLRLRPGDVLWDIGA-GS-GSITIEAARLVPNGRVYAIE----RNPEALRLIERNARRFGVSNIVIVEGDAPE--ALEDS   85 (124)
T ss_pred             HcCCCCCCEEEEeCC-CC-CHHHHHHHHHCCCceEEEEc----CCHHHHHHHHHHHHHhCCCceEEEeccccc--cChhh
Confidence            345677889999998 44 888999998875 5777776    4666666543    4444322  2221111  01111


Q ss_pred             hcCCCCccEEEECCCccc----HHHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGNS----ASKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~~----~~~a~~~l~~~G~~v  288 (288)
                       .+  ++|+|+...+...    ++.+.+.|+++|+|+
T Consensus        86 -~~--~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li  119 (124)
T TIGR02469        86 -LP--EPDRVFIGGSGGLLQEILEAIWRRLRPGGRIV  119 (124)
T ss_pred             -cC--CCCEEEECCcchhHHHHHHHHHHHcCCCCEEE
Confidence             12  4999987654322    388899999999985

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.023  Score=49.10  Aligned_cols=34  Identities=15%  Similarity=0.144  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ++++++|+|++|.+|...++.+...|++|+.+.+
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r   39 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGR   39 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC
Confidence            4689999999999999999999999999999884

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.0059  Score=52.22  Aligned_cols=34  Identities=18%  Similarity=0.313  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +|++++|+|++|++|...++.+...|++|+++.+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r   41 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTAR   41 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeC
Confidence            5789999999999999999988889999999884

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.37  E-value=0.028  Score=48.63  Aligned_cols=35  Identities=23%  Similarity=0.331  Sum_probs=31.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKT   39 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            46799999999999999999888899999998864

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.37  E-value=0.017  Score=45.66  Aligned_cols=79  Identities=18%  Similarity=0.291  Sum_probs=44.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC--HHHHH----HHHhCCCCE-EEeCCc---ccHHH-HHHHhcC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS--DEAKE----KLKGLGADE-VFTESQ---LEVKN-VKGLLAN  258 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~--~~~~~----~~~~~g~~~-v~~~~~---~~~~~-i~~~~~~  258 (288)
                      ++++|+|+++++|...++.+...|.++++.+.   .+  .++.+    .++..+... ++..+-   ...+. +.+....
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~---r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTS---RSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKR   77 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEE---SSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEee---ecccccccccccccccccccccccccccccccccccccccccccc
Confidence            47999999999999988877777775554443   23  33332    334455321 222111   12222 2222212


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+.+|++|+|.|.
T Consensus        78 ~~~ld~li~~ag~   90 (167)
T PF00106_consen   78 FGPLDILINNAGI   90 (167)
T ss_dssp             HSSESEEEEECSC
T ss_pred             ccccccccccccc
Confidence            2259999999985

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=96.35  E-value=0.047  Score=49.40  Aligned_cols=94  Identities=17%  Similarity=0.202  Sum_probs=64.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHH-HHHHHhCCCCEEEeCCcccHHHHHH------------
Q 023007          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKNVKG------------  254 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~i~~------------  254 (288)
                      ++|.|+|++|.+|..++++.+..  .+++.+++..  .+.++ .+.++++++..+...++...+.++.            
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~--~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G   79 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAG--KNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAG   79 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcC--CCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEC
Confidence            57999999999999999998865  5788888743  34444 4566789998876655433222322            


Q ss_pred             ------HhcCCCCccEEEECCCcc-cHHHHHhhccCCCe
Q 023007          255 ------LLANLPEPALGFNCVGGN-SASKVLKFLRFREE  286 (288)
Q Consensus       255 ------~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~  286 (288)
                            +.... .+|+|+++.++. .+...+.+++.|=+
T Consensus        80 ~~~~~~l~~~~-~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~  117 (385)
T PRK05447         80 EEGLCELAALP-EADVVVAAIVGAAGLLPTLAAIRAGKR  117 (385)
T ss_pred             hhHHHHHhcCC-CCCEEEEeCcCcccHHHHHHHHHCCCc
Confidence                  22222 389999998775 34677777766543

>PRK09135 pteridine reductase; Provisional

Probab=96.34  E-value=0.035  Score=46.87  Aligned_cols=34  Identities=15%  Similarity=0.184  Sum_probs=30.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|++|.+|..+++.+...|++|+++.+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r   38 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYH   38 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            4579999999999999999888888999999985

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.029  Score=49.05  Aligned_cols=85  Identities=15%  Similarity=0.189  Sum_probs=49.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-HHHHHHHHhCCCCE-EEeCC--c-ccHHH-HHHHhcCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANLP  260 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~g~~~-v~~~~--~-~~~~~-i~~~~~~~g  260 (288)
                      -++++++|+|++|++|...++.+...|++|+.+.+..... ++..+.++..+.+. ++..+  + ..++. +.+.....+
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3468999999999999998888888899999887532111 11122333334332 12111  1 11211 222222223


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|.|.|.
T Consensus       124 ~iD~lI~~Ag~  134 (290)
T PRK06701        124 RLDILVNNAAF  134 (290)
T ss_pred             CCCEEEECCcc
Confidence            59999999874

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.028  Score=48.07  Aligned_cols=34  Identities=15%  Similarity=0.161  Sum_probs=30.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|++|++|...++.+...|++++++.+
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~   41 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYN   41 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            4679999999999999999888889999988764

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.032  Score=47.57  Aligned_cols=79  Identities=13%  Similarity=0.082  Sum_probs=48.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCCC--EEEeCCcccHHH----HHHHhcCCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGAD--EVFTESQLEVKN----VKGLLANLPE  261 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~~--~v~~~~~~~~~~----i~~~~~~~g~  261 (288)
                      +++++|+|++|++|...+..+...|++++++.+    +.++.+. .+.+...  ..+..+-.+.+.    +.+.....++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDI----DAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999988888888999999884    4444432 2333211  122211111222    2222222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|.+.|.
T Consensus        78 ~d~vi~~ag~   87 (257)
T PRK07074         78 VDVLVANAGA   87 (257)
T ss_pred             CCEEEECCCC
Confidence            9999999975

>PRK06484 short chain dehydrogenase; Validated

Probab=96.31  E-value=0.02  Score=54.41  Aligned_cols=81  Identities=17%  Similarity=0.178  Sum_probs=53.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEE---EeCCc-ccHHH-HHHHhcCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEV---FTESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v---~~~~~-~~~~~-i~~~~~~~g  260 (288)
                      ..|++++|+|+++++|...++.+...|++|+++.    .++++.+.+. +++....   .|-.+ ..++. +.+.....|
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIID----RDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999998888999999988    4555555443 4554322   22222 12222 222222234


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus       343 ~id~li~nAg~  353 (520)
T PRK06484        343 RLDVLVNNAGI  353 (520)
T ss_pred             CCCEEEECCCC
Confidence            69999999884

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=96.30  E-value=0.028  Score=50.54  Aligned_cols=79  Identities=15%  Similarity=0.220  Sum_probs=50.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhC--CCC-EEEeCCcccHHHHHHHhcCCCC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGL--GAD-EVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~--g~~-~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      -..+.+|||+|++|.+|...++.+...|++|+++.+    +.++.+. ...+  +.. .++..+-.+.+.+.++..+   
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---   79 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR----DPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKG---   79 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcC---
Confidence            345779999999999999999999989999998874    3333222 2222  111 1222221222344444443   


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|+||.+.+.
T Consensus        80 ~d~Vih~A~~   89 (353)
T PLN02896         80 CDGVFHVAAS   89 (353)
T ss_pred             CCEEEECCcc
Confidence            8999999874

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.30  E-value=0.018  Score=47.47  Aligned_cols=80  Identities=18%  Similarity=0.206  Sum_probs=55.4

Q ss_pred             CCCeEEEeCC-CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCE-EEeCCc-ccH----HHHHHHhcCC
Q 023007          188 SGDSIVQNGA-TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADE-VFTESQ-LEV----KNVKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~-~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~-v~~~~~-~~~----~~i~~~~~~~  259 (288)
                      ..+.|||+|+ .|++|.+.+.-..+.|+.|+++.+    +-+..+.+. ++|... -+|-.+ +.+    ..++..++| 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR----~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G-   80 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATAR----RLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG-   80 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcc----ccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC-
Confidence            3467999988 688999988888888999999994    566666554 777432 233222 222    345554555 


Q ss_pred             CCccEEEECCCccc
Q 023007          260 PEPALGFNCVGGNS  273 (288)
Q Consensus       260 g~~D~v~d~~g~~~  273 (288)
                       +.|+.+|+.|.+.
T Consensus        81 -kld~L~NNAG~~C   93 (289)
T KOG1209|consen   81 -KLDLLYNNAGQSC   93 (289)
T ss_pred             -ceEEEEcCCCCCc
Confidence             7999999988644

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.29  E-value=0.0054  Score=52.72  Aligned_cols=34  Identities=24%  Similarity=0.339  Sum_probs=30.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|++|++|.+.++.+...|++|+.+..
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~   41 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADI   41 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999999999999999999998874

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.031  Score=47.15  Aligned_cols=81  Identities=15%  Similarity=0.125  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCC-EEEeCCcc---cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGAD-EVFTESQL---EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~-~v~~~~~~---~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++++.+.+.   ++...    +.++..+.. .++..+-.   .++. +.+....
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG---SAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC---CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999887642   22222    233334432 12221111   1222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|.+.|.
T Consensus        81 ~~~id~vi~~ag~   93 (245)
T PRK12937         81 FGRIDVLVNNAGV   93 (245)
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999884

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.27  E-value=0.028  Score=48.19  Aligned_cols=84  Identities=8%  Similarity=0.049  Sum_probs=48.7

Q ss_pred             CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHhCCCC-EEE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRA--GSDEAKEKLKGLGAD-EVF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~--~~~~~~~~~~~~g~~-~v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|++  +++|.+.++.+...|++|+++.....  ..++..+.+++.+.. ..+  |-.+ ..++. +......
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            47899999985  79999999888889999987753211  123333333332211 122  2111 11222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus        85 ~g~iD~lv~nag~   97 (258)
T PRK07370         85 WGKLDILVHCLAF   97 (258)
T ss_pred             cCCCCEEEEcccc
Confidence            3469999999984

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.26  E-value=0.04  Score=46.38  Aligned_cols=35  Identities=17%  Similarity=0.267  Sum_probs=30.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+++++|+|++|.+|...+..+...|++|+++.+.
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~   38 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYAS   38 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            45799999999999999999999999999887753

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=96.26  E-value=0.038  Score=48.92  Aligned_cols=80  Identities=21%  Similarity=0.338  Sum_probs=49.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC-CC--C-EEEeCCcccHHHHHHHhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GA--D-EVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-g~--~-~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      .|++|+|+|++|.+|...+..+...|++|+++++... ..++...+... +.  . .++..+-.+.+.+.+...+   +|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d   79 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLT-DRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG---CD   79 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCc-chHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC---CC
Confidence            4689999999999999999988888999998886432 11222222111 11  1 1222111122334444443   99


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      +||.+.+.
T Consensus        80 ~vih~A~~   87 (322)
T PLN02986         80 AVFHTASP   87 (322)
T ss_pred             EEEEeCCC
Confidence            99999873

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.24  E-value=0.025  Score=47.22  Aligned_cols=97  Identities=16%  Similarity=0.107  Sum_probs=59.0

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGL  255 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i~~~  255 (288)
                      +...++++++||=+|+  +.|..++.+++..+.  +|+.+.    .+++..+.+    +++|.+.+.....+..+.   +
T Consensus        71 ~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD----~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~---~  141 (215)
T TIGR00080        71 ELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIE----RIPELAEKAERRLRKLGLDNVIVIVGDGTQG---W  141 (215)
T ss_pred             HHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEe----CCHHHHHHHHHHHHHCCCCCeEEEECCcccC---C
Confidence            4467899999999888  556777778877653  577776    466666554    345654321111110000   1


Q ss_pred             hcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      ... ..||+|+-+...... ....+.|+++|+++
T Consensus       142 ~~~-~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv  174 (215)
T TIGR00080       142 EPL-APYDRIYVTAAGPKIPEALIDQLKEGGILV  174 (215)
T ss_pred             ccc-CCCCEEEEcCCcccccHHHHHhcCcCcEEE
Confidence            111 149987755444444 77889999999975

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.24  E-value=0.039  Score=48.12  Aligned_cols=85  Identities=14%  Similarity=0.102  Sum_probs=56.2

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEE---eCCc---ccHHH----H
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVF---TESQ---LEVKN----V  252 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~---~~~~---~~~~~----i  252 (288)
                      .+.++-..|+|+|++.++|++.+..++..|++|.++.    ++.+++..++ .++....+   .+..   .++++    +
T Consensus        28 ~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~a----r~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~  103 (331)
T KOG1210|consen   28 VKPKPRRHILITGGSSGLGLALALECKREGADVTITA----RSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVI  103 (331)
T ss_pred             cccCccceEEEecCcchhhHHHHHHHHHccCceEEEe----ccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHH
Confidence            3445557999999999999999999999999999999    4677766553 44432211   1211   11222    2


Q ss_pred             HHHhcCCCCccEEEECCCcc
Q 023007          253 KGLLANLPEPALGFNCVGGN  272 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~~  272 (288)
                      .++-.-.+.+|.+|+|.|..
T Consensus       104 ~~l~~~~~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  104 EELRDLEGPIDNLFCCAGVA  123 (331)
T ss_pred             hhhhhccCCcceEEEecCcc
Confidence            22222224589999999963

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.034  Score=46.61  Aligned_cols=74  Identities=16%  Similarity=0.242  Sum_probs=48.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-EeCCc-ccHHHHHHHhcCCCCccEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQ-LEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~~~~~-~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +++|+|++|++|...++.+...|++|+.+.    .++++.+.+ ++++...+ .|-.+ ..++.+.+...+  ++|++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~----r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVG----ARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH--HLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh--cCcEEEE
Confidence            589999999999999998888999999987    455555433 44444322 22222 223333322222  3999999


Q ss_pred             CCC
Q 023007          268 CVG  270 (288)
Q Consensus       268 ~~g  270 (288)
                      |.|
T Consensus        76 ~ag   78 (223)
T PRK05884         76 VPA   78 (223)
T ss_pred             CCC
Confidence            976

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.23  E-value=0.035  Score=47.56  Aligned_cols=82  Identities=13%  Similarity=0.161  Sum_probs=49.6

Q ss_pred             CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EEE--eCCc-ccHHHHH-HHhcCC
Q 023007          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVF--TESQ-LEVKNVK-GLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v~--~~~~-~~~~~i~-~~~~~~  259 (288)
                      .+++++|+|+  ++++|.+.++.+...|++|+++.+.  .+++..+.+ ++++.. ..+  |-.+ ..++.+. ......
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFG--RALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCc--cchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4689999998  7999999998888899999887643  123333333 344421 112  2111 1222222 222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|++|++.|.
T Consensus        84 g~iD~li~nAG~   95 (256)
T PRK07889         84 DGLDGVVHSIGF   95 (256)
T ss_pred             CCCcEEEEcccc
Confidence            469999999874

>PRK07985 oxidoreductase; Provisional

Probab=96.22  E-value=0.035  Score=48.70  Aligned_cols=82  Identities=12%  Similarity=0.060  Sum_probs=49.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHH-HHHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVK-NVKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~-~i~~~~~~  258 (288)
                      ++++++|+|+++++|.+.++.+...|++|+++....  +.+..+    .+++.+... ++  |-.+ ..++ .+.+....
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPV--EEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCc--chhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            568999999999999999998888999998865321  122222    223344332 12  2111 1122 22222233


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|+++++.|.
T Consensus       126 ~g~id~lv~~Ag~  138 (294)
T PRK07985        126 LGGLDIMALVAGK  138 (294)
T ss_pred             hCCCCEEEECCCC
Confidence            3459999999874

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.044  Score=46.77  Aligned_cols=84  Identities=23%  Similarity=0.342  Sum_probs=49.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcccHHHHH----HHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVK----GLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~~~~~i~----~~~~~  258 (288)
                      .+++++|+|++|++|...++.+...|++++.+......+.+..+    .++..+.+. ++..+-.+.+.+.    +..+.
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            46799999999999999999998899997777543212222222    223334331 1211111122222    22222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence            2359999999985

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.20  E-value=0.061  Score=43.14  Aligned_cols=54  Identities=20%  Similarity=0.231  Sum_probs=38.8

Q ss_pred             cccccchHHHHHHHHhhcCCCCCCeEEEeCCCCh-HHHHHHHHHHHcCCeEEEEEc
Q 023007          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI-VGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       167 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~-vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ...|+....+...+.....--.|++|+|.|+ |. +|..++..++..|++++++.+
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r   76 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHS   76 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEEC
Confidence            4445444445555555444467899999999 65 699899999999998877774

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.20  E-value=0.041  Score=50.28  Aligned_cols=88  Identities=22%  Similarity=0.228  Sum_probs=53.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHh--CCCC-EEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          192 IVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG--LGAD-EVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~--~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      |+|+|+ |.+|..+++.+...+-  ++++..    .+.++.+.+.+  .+.. ....-+..+.+.+.++..+   .|+|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~----r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVAD----RNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRG---CDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEE----SSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTT---SSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEE----CCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhc---CCEEE
Confidence            789999 9999999999888764  566666    57777665543  2221 1111112223456777665   89999


Q ss_pred             ECCCcccH-HHHHhhccCCCee
Q 023007          267 NCVGGNSA-SKVLKFLRFREEQ  287 (288)
Q Consensus       267 d~~g~~~~-~~a~~~l~~~G~~  287 (288)
                      ||+|.... ..+..|++.+-.|
T Consensus        73 n~~gp~~~~~v~~~~i~~g~~y   94 (386)
T PF03435_consen   73 NCAGPFFGEPVARACIEAGVHY   94 (386)
T ss_dssp             E-SSGGGHHHHHHHHHHHT-EE
T ss_pred             ECCccchhHHHHHHHHHhCCCe
Confidence            99998754 4444566555444

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.20  E-value=0.022  Score=50.46  Aligned_cols=85  Identities=22%  Similarity=0.219  Sum_probs=52.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCc--ccHHHHHHHh----cCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ--LEVKNVKGLL----ANL  259 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~--~~~~~i~~~~----~~~  259 (288)
                      -.|.+++|+|+++++|...+.-+...|++|+..+++....++..+.+.+ .....+....-  .+.+.++.+.    ...
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            4568999999999999999999999999999999643222222222222 33333322221  1233333322    222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      ++.|+.|+++|-
T Consensus       113 ~~ldvLInNAGV  124 (314)
T KOG1208|consen  113 GPLDVLINNAGV  124 (314)
T ss_pred             CCccEEEeCccc
Confidence            359999999884

>TIGR02415 23BDH acetoin reductases

Probab=96.18  E-value=0.031  Score=47.50  Aligned_cols=78  Identities=13%  Similarity=0.144  Sum_probs=47.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHHH-HHHHhcCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~~g  260 (288)
                      ++++|+|++|++|...++.+...|++++.+.+    ++++.+    .++..+... .+  |-.+ ..++. +.......+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~   76 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADL----NEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG   76 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47999999999999999988899999998874    333322    223334321 12  2111 12222 222222233


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        77 ~id~vi~~ag~   87 (254)
T TIGR02415        77 GFDVMVNNAGV   87 (254)
T ss_pred             CCCEEEECCCc
Confidence            59999999875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=96.18  E-value=0.014  Score=57.08  Aligned_cols=81  Identities=17%  Similarity=0.121  Sum_probs=56.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-------------C----HHHHHHHHhCCCCEEEeCCcccHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-------------S----DEAKEKLKGLGADEVFTESQLEVK  250 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-------------~----~~~~~~~~~~g~~~v~~~~~~~~~  250 (288)
                      .+++|+|+|+ |..|+.++..++..|++|++..+.+..             .    +...++++++|++..++..-..--
T Consensus       309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            4899999999 999999999999999999888744310             0    124567788998766665321100


Q ss_pred             HHHHHhcCCCCccEEEECCCcc
Q 023007          251 NVKGLLANLPEPALGFNCVGGN  272 (288)
Q Consensus       251 ~i~~~~~~~g~~D~v~d~~g~~  272 (288)
                      .+.++..   ++|.||.++|..
T Consensus       388 ~~~~l~~---~~DaV~latGa~  406 (639)
T PRK12809        388 TFSDLTS---EYDAVFIGVGTY  406 (639)
T ss_pred             CHHHHHh---cCCEEEEeCCCC
Confidence            1222322   399999999974

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.18  E-value=0.029  Score=44.95  Aligned_cols=90  Identities=20%  Similarity=0.181  Sum_probs=58.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC------------------cccHHH
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES------------------QLEVKN  251 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~------------------~~~~~~  251 (288)
                      .+|+|+|+ |.+|+.|+++++.+|++++...    ...++.+..+..+...+....                  ......
T Consensus        21 ~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (168)
T PF01262_consen   21 AKVVVTGA-GRVGQGAAEIAKGLGAEVVVPD----ERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN   95 (168)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHTT-EEEEEE----SSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred             eEEEEECC-CHHHHHHHHHHhHCCCEEEecc----CCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence            68999998 9999999999999999999997    577888888777765554310                  011123


Q ss_pred             HHHHhcCCCCccEEEECC---C--cccH--HHHHhhccCCCee
Q 023007          252 VKGLLANLPEPALGFNCV---G--GNSA--SKVLKFLRFREEQ  287 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~---g--~~~~--~~a~~~l~~~G~~  287 (288)
                      +.+....   +|+++.+.   +  .+.+  +..++.|+++..+
T Consensus        96 f~~~i~~---~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvI  135 (168)
T PF01262_consen   96 FAEFIAP---ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVI  135 (168)
T ss_dssp             HHHHHHH----SEEEEHHHBTTSS---SBEHHHHHTSSTTEEE
T ss_pred             HHHHHhh---CcEEeeecccCCCCCCEEEEhHHhhccCCCceE
Confidence            3343332   89888642   2  1222  7777888876544

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=96.16  E-value=0.022  Score=53.53  Aligned_cols=83  Identities=17%  Similarity=0.184  Sum_probs=56.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-------------C----HHHHHHHHhCCCCEEEeCCcccH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-------------S----DEAKEKLKGLGADEVFTESQLEV  249 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-------------~----~~~~~~~~~~g~~~v~~~~~~~~  249 (288)
                      ..+++|+|+|+ |..|+.++..++..|++|+++...+..             .    ....++++++|.+..++......
T Consensus       139 ~~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  217 (467)
T TIGR01318       139 PTGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD  217 (467)
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc
Confidence            36789999999 999999999999999998887643210             0    13456778899876655432110


Q ss_pred             HHHHHHhcCCCCccEEEECCCccc
Q 023007          250 KNVKGLLANLPEPALGFNCVGGNS  273 (288)
Q Consensus       250 ~~i~~~~~~~g~~D~v~d~~g~~~  273 (288)
                      -.+..+..   ++|.||.++|...
T Consensus       218 ~~~~~~~~---~~D~vilAtGa~~  238 (467)
T TIGR01318       218 ISLDDLLE---DYDAVFLGVGTYR  238 (467)
T ss_pred             cCHHHHHh---cCCEEEEEeCCCC
Confidence            01122222   3999999999743

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK07102 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.027  Score=47.61  Aligned_cols=32  Identities=22%  Similarity=0.147  Sum_probs=29.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ++++|+|++|++|...++.+...|++|+++.+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r   33 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAAR   33 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC
Confidence            58999999999999999988889999999984

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=96.16  E-value=0.046  Score=48.44  Aligned_cols=79  Identities=20%  Similarity=0.179  Sum_probs=48.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHH-HHhCCC--C--EEE--eCCcc-cHHH-HHHHhcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEK-LKGLGA--D--EVF--TESQL-EVKN-VKGLLAN  258 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~-~~~~g~--~--~v~--~~~~~-~~~~-i~~~~~~  258 (288)
                      +++++|+|+++++|...++.+...| ++|+.+.+    ++++.+. .+++..  .  .++  |-.+. .++. +.+....
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   78 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACR----DFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES   78 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeC----CHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            5789999999999999888888889 89998884    4444433 233321  1  112  22111 1222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        79 ~~~iD~lI~nAG~   91 (314)
T TIGR01289        79 GRPLDALVCNAAV   91 (314)
T ss_pred             CCCCCEEEECCCc
Confidence            2359999999874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.16  E-value=0.029  Score=47.51  Aligned_cols=79  Identities=16%  Similarity=0.154  Sum_probs=47.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcc---cHH-HHHHHhcCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQL---EVK-NVKGLLANLP  260 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~---~~~-~i~~~~~~~g  260 (288)
                      ++++|+|++|++|...++.+...|++++++.+.   ++++.+    .++..+... .+..+-.   ..+ .+.+.....+
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYAR---DAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            589999999999999998888889998876532   333322    233333322 2221111   121 1222222223


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|.|.|.
T Consensus        80 ~id~li~~ag~   90 (248)
T PRK06947         80 RLDALVNNAGI   90 (248)
T ss_pred             CCCEEEECCcc
Confidence            59999999974

>PRK05855 short chain dehydrogenase; Validated

Probab=96.16  E-value=0.024  Score=54.23  Aligned_cols=80  Identities=21%  Similarity=0.227  Sum_probs=50.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .+.+++|+|++|++|...++-+...|++|+.+.+    ++++.+.    +++.|... ++  |-.+ ..++. +.+....
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDI----DEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4579999999999999988888889999998884    4444433    23344321 12  2111 11222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus       390 ~g~id~lv~~Ag~  402 (582)
T PRK05855        390 HGVPDIVVNNAGI  402 (582)
T ss_pred             cCCCcEEEECCcc
Confidence            3459999999985

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.15  E-value=0.033  Score=46.89  Aligned_cols=35  Identities=20%  Similarity=0.240  Sum_probs=30.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +.++++|+|++|.+|...++.+...|++++++.+.
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~   39 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRS   39 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            34799999999999999999999999998887653

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.14  E-value=0.088  Score=48.55  Aligned_cols=78  Identities=9%  Similarity=0.031  Sum_probs=51.9

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      ..--.+++|+|+|+ |++|.+++..+...|++ ++++.    ++.++.+ +..+++...++.     ++.+.+...   .
T Consensus       176 ~~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~n----Rt~~ra~~La~~~~~~~~~~-----~~~l~~~l~---~  242 (414)
T PRK13940        176 LDNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLAN----RTIEKAQKITSAFRNASAHY-----LSELPQLIK---K  242 (414)
T ss_pred             hcCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHHhcCCeEec-----HHHHHHHhc---c
Confidence            33346789999999 99999999999999975 55554    4555544 444565212221     234444333   3


Q ss_pred             ccEEEECCCcccH
Q 023007          262 PALGFNCVGGNSA  274 (288)
Q Consensus       262 ~D~v~d~~g~~~~  274 (288)
                      .|+||+|++.+..
T Consensus       243 aDiVI~aT~a~~~  255 (414)
T PRK13940        243 ADIIIAAVNVLEY  255 (414)
T ss_pred             CCEEEECcCCCCe
Confidence            9999999998664

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.054  Score=45.76  Aligned_cols=78  Identities=19%  Similarity=0.150  Sum_probs=47.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC-CEEEeCCcccHHHHHHHhcCC-CCccEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-DEVFTESQLEVKNVKGLLANL-PEPALGFN  267 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~i~~~~~~~-g~~D~v~d  267 (288)
                      ++++|+|++|++|...+..+...|++|+++.    .++++.+.+.+.+. -..+..+-.+.+.+.++.... ...|+++.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACG----RNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEE----CCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            5799999999999998888888899999988    46666665544331 122221111223333332221 12677777


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      +.|.
T Consensus        78 ~ag~   81 (240)
T PRK06101         78 NAGD   81 (240)
T ss_pred             cCcc
Confidence            7763

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.14  E-value=0.0099  Score=55.42  Aligned_cols=59  Identities=10%  Similarity=0.102  Sum_probs=42.8

Q ss_pred             hcCCCCCCeEE----EeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCC
Q 023007          183 FTTLNSGDSIV----QNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTES  245 (288)
Q Consensus       183 ~~~~~~g~~vl----I~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~  245 (288)
                      ..+.++|++++    |+|++|++|.+++++++..|++|+.+..    .+.+....+..+.+ .+++..
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~----~~~~~~~~~~~~~~~~~~d~~   91 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANND----GGLTWAAGWGDRFGALVFDAT   91 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCc----cccccccCcCCcccEEEEECC
Confidence            35678899988    8998899999999999999999998863    33333333344554 345543

>PRK05599 hypothetical protein; Provisional

Probab=96.13  E-value=0.034  Score=47.29  Aligned_cols=76  Identities=25%  Similarity=0.242  Sum_probs=45.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCC--EEE--eCCcc-cHHHH-HHHhcCCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD--EVF--TESQL-EVKNV-KGLLANLP  260 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~--~v~--~~~~~-~~~~i-~~~~~~~g  260 (288)
                      +++|+|+++++|.+.++.+. .|++|+.+.+    ++++.+    .+++.+.+  ..+  |-.+. .++.+ .+.....|
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r----~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   76 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAAR----RPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAG   76 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeC----CHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence            68999999999998777665 4999999884    444443    23344432  222  22121 12221 11222223


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|++.|.
T Consensus        77 ~id~lv~nag~   87 (246)
T PRK05599         77 EISLAVVAFGI   87 (246)
T ss_pred             CCCEEEEecCc
Confidence            59999999875

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.13  E-value=0.034  Score=46.79  Aligned_cols=32  Identities=16%  Similarity=0.124  Sum_probs=29.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ++++|+|++|++|...++.+...|++++++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r   32 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG   32 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            47899999999999999999999999998875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.13  E-value=0.039  Score=46.81  Aligned_cols=33  Identities=21%  Similarity=0.206  Sum_probs=29.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ++++||+|++|.+|...+..+...|++|+++.+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r   33 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDL   33 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeC
Confidence            368999999999999999888889999999984

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.12  E-value=0.068  Score=45.36  Aligned_cols=77  Identities=22%  Similarity=0.267  Sum_probs=49.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCE-EE--eCCc-ccHHH-HHHHhcCCCCccE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADE-VF--TESQ-LEVKN-VKGLLANLPEPAL  264 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~-v~--~~~~-~~~~~-i~~~~~~~g~~D~  264 (288)
                      +++|+|++|++|.+.+..+...|++|+++.    .++++.+.+. .++... .+  |-.+ ..++. +.+.....+++|+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATG----RRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999999988    4555555443 344321 11  2111 11222 2222222235999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      ++.+.|.
T Consensus        78 vi~~ag~   84 (248)
T PRK10538         78 LVNNAGL   84 (248)
T ss_pred             EEECCCc
Confidence            9999874

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.11  E-value=0.048  Score=45.15  Aligned_cols=34  Identities=21%  Similarity=0.260  Sum_probs=28.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      ..+|+|.|+ |++|..+++.+...|..-+.++|.+
T Consensus        21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            378999999 9999999999999999766666654

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.10  E-value=0.043  Score=46.41  Aligned_cols=81  Identities=17%  Similarity=0.203  Sum_probs=48.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCE-EEeCCccc---HH-HHHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VFTESQLE---VK-NVKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~-v~~~~~~~---~~-~i~~~~~~  258 (288)
                      ++++++|+|++|++|...+..+...|+++++..+.   +++..    +.++..+.+. .+..+-.+   ++ .+.+....
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNS---SKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCC---cHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999998888889999876532   23332    2223334322 12221111   21 12222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+.+|++|.|.|.
T Consensus        82 ~~~id~vi~~ag~   94 (247)
T PRK12935         82 FGKVDILVNNAGI   94 (247)
T ss_pred             cCCCCEEEECCCC
Confidence            3359999999885

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.062  Score=45.68  Aligned_cols=33  Identities=18%  Similarity=0.219  Sum_probs=29.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .+++++|+|+++++|.+.++.+...|++|++..
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~   35 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHY   35 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence            468999999999999999999999999998764

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.044  Score=46.58  Aligned_cols=33  Identities=18%  Similarity=0.198  Sum_probs=28.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .+++++|+|++|++|...++.+...|++++++.
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~   37 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHY   37 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence            357999999999999999998888899987753

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.06  E-value=0.068  Score=45.30  Aligned_cols=34  Identities=15%  Similarity=0.254  Sum_probs=29.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|++|++|...+..+...|++|+.+.+
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~   37 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH   37 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence            3578999999999999999988889999988763

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.052  Score=45.39  Aligned_cols=75  Identities=15%  Similarity=0.101  Sum_probs=47.1

Q ss_pred             EEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC--CCC-EEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          193 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL--GAD-EVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       193 lI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~--g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      +|+|++|++|...++.+...|++|+.+.+    ++++.+.+ ..+  +.. +++..+-.+.+.+.+.....+++|++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASR----SRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            58999999999988888889999999884    44444332 222  221 22222222223344433333459999999


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      .|.
T Consensus        77 ag~   79 (230)
T PRK07041         77 AAD   79 (230)
T ss_pred             CCC
Confidence            874

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.05  E-value=0.058  Score=46.02  Aligned_cols=77  Identities=12%  Similarity=0.097  Sum_probs=47.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-h-CCCCEE-EeCCcccHHHHHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-G-LGADEV-FTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~-~g~~~v-~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      .+.+|+|+|++|.+|...++.+...|++|+++++    ++++..... . .++..+ .|..+. .+.+.+....  ++|+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R----~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~l~~~~~~--~~d~   88 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVR----DVDKAKTSLPQDPSLQIVRADVTEG-SDKLVEAIGD--DSDA   88 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEec----CHHHHHHhcccCCceEEEEeeCCCC-HHHHHHHhhc--CCCE
Confidence            3579999999999999999888888999999884    444433221 1 112211 222221 1233333211  3999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      ||.+.|.
T Consensus        89 vi~~~g~   95 (251)
T PLN00141         89 VICATGF   95 (251)
T ss_pred             EEECCCC
Confidence            9998774

>PLN02240 UDP-glucose 4-epimerase

Probab=96.05  E-value=0.063  Score=48.07  Aligned_cols=82  Identities=17%  Similarity=0.210  Sum_probs=48.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC----CCC-EEEeCCcccHHHHHHHhcCCCCcc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL----GAD-EVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      +++|+|+|++|.+|...++.+...|.+|+++.+......+..+.+...    +.. ..+..+-.+.+.+..+.... ++|
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-~~d   83 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-RFD   83 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-CCC
Confidence            578999999999999999888888999988864221122222222211    111 11211111223444433322 399


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      .||+|.+.
T Consensus        84 ~vih~a~~   91 (352)
T PLN02240         84 AVIHFAGL   91 (352)
T ss_pred             EEEEcccc
Confidence            99999874

>PLN02686 cinnamoyl-CoA reductase

Probab=96.04  E-value=0.052  Score=49.24  Aligned_cols=36  Identities=14%  Similarity=0.174  Sum_probs=32.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ...+++|||+|++|.+|..+++.+...|++|+++++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r   85 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVD   85 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeC
Confidence            455789999999999999999999999999998874

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.028  Score=55.01  Aligned_cols=79  Identities=23%  Similarity=0.329  Sum_probs=49.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-EE--eCCc-ccHHH-HHHHhcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VF--TESQ-LEVKN-VKGLLANL  259 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~--~~~~-~~~~~-i~~~~~~~  259 (288)
                      +++++|+|++|++|...+..+...|++|+++.+    ++++.+.+    +..+... ++  |-.+ ..++. +.+.....
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVAR----NGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            679999999999999999888888999999984    45444332    2233321 12  1111 11222 22222233


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|++|+|.|.
T Consensus       447 g~id~li~~Ag~  458 (657)
T PRK07201        447 GHVDYLVNNAGR  458 (657)
T ss_pred             CCCCEEEECCCC
Confidence            459999999984

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.037  Score=47.99  Aligned_cols=77  Identities=22%  Similarity=0.160  Sum_probs=46.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHHHHHHHhcCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKNVKGLLANLP  260 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~~i~~~~~~~g  260 (288)
                      +++++|+|+ |++|...++.+. .|++|+++.+    ++++.+    .++..+.+. ++  |-.+ ..++.+.+.....+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g   75 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADY----NEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLG   75 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeC----CHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcC
Confidence            367899998 799999888875 7999999884    344332    223334321 22  2222 12222222222234


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        76 ~id~li~nAG~   86 (275)
T PRK06940         76 PVTGLVHTAGV   86 (275)
T ss_pred             CCCEEEECCCc
Confidence            69999999985

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.02  E-value=0.073  Score=44.89  Aligned_cols=84  Identities=10%  Similarity=0.083  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-EEeCCcc---cHHHHHH-HhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VFTESQL---EVKNVKG-LLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~~~~~~---~~~~i~~-~~~~  258 (288)
                      .+.+++|+|++|++|...+..+...|++++++.+....++++.+.+    +..+... ++..+-.   .++.+.+ ....
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999988888889999988654322233333322    2333321 2222211   1222221 1111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|.+|.+.|.
T Consensus        85 ~~~~d~vi~~ag~   97 (249)
T PRK12827         85 FGRLDILVNNAGI   97 (249)
T ss_pred             hCCCCEEEECCCC
Confidence            2259999999885

>PLN02427 UDP-apiose/xylose synthase

Probab=95.99  E-value=0.052  Score=49.48  Aligned_cols=80  Identities=11%  Similarity=0.061  Sum_probs=49.4

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCC------CEEEeCCcccHHHHHHHh
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGA------DEVFTESQLEVKNVKGLL  256 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~i~~~~  256 (288)
                      ++..+..+|||+|++|-+|...++.+... |.+|+++.+    +.++...+...+.      -.++..+-.+.+.+.+..
T Consensus         9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r----~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~   84 (386)
T PLN02427          9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDV----YNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI   84 (386)
T ss_pred             CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEec----CchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHh
Confidence            33444568999999999999988888877 588888873    3334333332221      112211111223455544


Q ss_pred             cCCCCccEEEECCC
Q 023007          257 ANLPEPALGFNCVG  270 (288)
Q Consensus       257 ~~~g~~D~v~d~~g  270 (288)
                      .+   +|+||.+.+
T Consensus        85 ~~---~d~ViHlAa   95 (386)
T PLN02427         85 KM---ADLTINLAA   95 (386)
T ss_pred             hc---CCEEEEccc
Confidence            43   999999987

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.99  E-value=0.036  Score=46.72  Aligned_cols=33  Identities=18%  Similarity=0.316  Sum_probs=29.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEE-Ec
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINI-IR  221 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~-~~  221 (288)
                      +++++|+|++|.+|...+..+...|++++.+ .+
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r   38 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDI   38 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence            5789999999999999888888889999888 63

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=95.99  E-value=0.064  Score=45.16  Aligned_cols=33  Identities=18%  Similarity=0.186  Sum_probs=29.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++++|+|++|++|...++.+...|++|+.+.+.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~   35 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFS   35 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            579999999999999998888889999999854

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=95.98  E-value=0.05  Score=46.81  Aligned_cols=32  Identities=19%  Similarity=0.257  Sum_probs=28.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++|+|+++++|...++.+...|++|+++.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~   33 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYH   33 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcC
Confidence            47899999999999999999999999998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.98  E-value=0.05  Score=45.08  Aligned_cols=81  Identities=14%  Similarity=0.149  Sum_probs=50.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++|+|.|+ |.+|...+..+...|++++++...  ..++-.+.+.. +.- .+..+......+    .   ++|+||-
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~--~~~~l~~l~~~-~~i-~~~~~~~~~~~l----~---~adlVia   76 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE--LTENLVKLVEE-GKI-RWKQKEFEPSDI----V---DAFLVIA   76 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC--CCHHHHHHHhC-CCE-EEEecCCChhhc----C---CceEEEE
Confidence            5689999999 999999998888899999888632  23333333333 211 111111110111    1   3899999


Q ss_pred             CCCcccHHHHHhh
Q 023007          268 CVGGNSASKVLKF  280 (288)
Q Consensus       268 ~~g~~~~~~a~~~  280 (288)
                      |++++..+..+..
T Consensus        77 aT~d~elN~~i~~   89 (202)
T PRK06718         77 ATNDPRVNEQVKE   89 (202)
T ss_pred             cCCCHHHHHHHHH
Confidence            9999888555543

>PRK06123 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.038  Score=46.76  Aligned_cols=80  Identities=15%  Similarity=0.162  Sum_probs=47.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCE-EE--eCCcc-cHHH-HHHHhcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADE-VF--TESQL-EVKN-VKGLLANL  259 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~~  259 (288)
                      +++++|+|++|++|...++.+...|++++.+..   .++++.    +.++..+... ++  |-.+. .++. +.+.....
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYL---RNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL   78 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecC---CCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence            468999999999999988888888998876642   123332    2233444332 22  21211 1222 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus        79 ~~id~li~~ag~   90 (248)
T PRK06123         79 GRLDALVNNAGI   90 (248)
T ss_pred             CCCCEEEECCCC
Confidence            359999999875

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.95  E-value=0.07  Score=46.80  Aligned_cols=34  Identities=15%  Similarity=0.032  Sum_probs=28.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~  221 (288)
                      -++++++|+|+ |+.|.+++..+...|++ ++++.+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R  158 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNI  158 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC
Confidence            35789999999 89999999888889997 766664

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=95.91  E-value=0.056  Score=47.72  Aligned_cols=31  Identities=16%  Similarity=0.173  Sum_probs=29.1

Q ss_pred             CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEE
Q 023007          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSIN  218 (288)
Q Consensus       188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~  218 (288)
                      .|++++|+|+  +.++|.+.++.+...|++|++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~   40 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV   40 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence            5899999999  799999999999999999988

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.91  E-value=0.054  Score=46.02  Aligned_cols=82  Identities=16%  Similarity=0.146  Sum_probs=48.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-HHHHHHHHhCCCC-EEE--eCCcc-cHHH-HHHHhcCCCCcc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EVF--TESQL-EVKN-VKGLLANLPEPA  263 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~g~~-~v~--~~~~~-~~~~-i~~~~~~~g~~D  263 (288)
                      ++++|+|++|++|...+..+...|++++++.+..... ++..+.++..+.. .++  |-.+. .... +.......+++|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999988888999999887532101 1112223333322 222  22211 1222 222222223599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|.|.|.
T Consensus        83 ~vi~~ag~   90 (256)
T PRK12745         83 CLVNNAGV   90 (256)
T ss_pred             EEEECCcc
Confidence            99999874

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.90  E-value=0.049  Score=46.14  Aligned_cols=81  Identities=16%  Similarity=0.154  Sum_probs=48.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH---HHHHhCCCC-EEE--eCCcc-cHH-HHHHHhcCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK---EKLKGLGAD-EVF--TESQL-EVK-NVKGLLANLP  260 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~~~~g~~-~v~--~~~~~-~~~-~i~~~~~~~g  260 (288)
                      +++++|+|++|.+|...++-+...|++++.+.+..  .++..   ..+++.+.. ..+  |-.+. ..+ .+.......+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKR--AEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC--hHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            58999999999999998888888999988776431  12222   233344432 122  21111 111 1222222223


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|.+.|.
T Consensus        84 ~~d~vi~~ag~   94 (252)
T PRK06077         84 VADILVNNAGL   94 (252)
T ss_pred             CCCEEEECCCC
Confidence            59999999984

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.90  E-value=0.039  Score=44.48  Aligned_cols=72  Identities=19%  Similarity=0.299  Sum_probs=48.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      +|.|+|++|.+|...++-|+.+|..|+++++    ++.+....+..   .++..+-.+...+.+...   ++|+||++.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivR----n~~K~~~~~~~---~i~q~Difd~~~~a~~l~---g~DaVIsA~~   71 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVR----NASKLAARQGV---TILQKDIFDLTSLASDLA---GHDAVISAFG   71 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEe----ChHhccccccc---eeecccccChhhhHhhhc---CCceEEEecc
Confidence            5889999999999999999999999999994    66665432111   122111112233333333   3999999987


Q ss_pred             cc
Q 023007          271 GN  272 (288)
Q Consensus       271 ~~  272 (288)
                      ..
T Consensus        72 ~~   73 (211)
T COG2910          72 AG   73 (211)
T ss_pred             CC
Confidence            65

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.90  E-value=0.064  Score=45.47  Aligned_cols=34  Identities=21%  Similarity=0.276  Sum_probs=30.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ++++++|+|++|.+|...++.+...|++|+.+.+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~   40 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQ   40 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEec
Confidence            4689999999999999999988889999999984

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=95.87  E-value=0.077  Score=47.23  Aligned_cols=77  Identities=14%  Similarity=0.118  Sum_probs=46.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHH-HhCCCC--EEEeCCcccHHHHHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL-KGLGAD--EVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      .|++|||+|++|.+|...++.+...|  .+|+++.+    ++.+.+.+ +.+...  .++..+-.+.+.+.+...+   +
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r----~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~---i   75 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSR----DELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRG---V   75 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcC----ChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhc---C
Confidence            46899999999999999888777765  67777763    23322222 223211  1221121223445444443   9


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |+||++.|.
T Consensus        76 D~Vih~Ag~   84 (324)
T TIGR03589        76 DYVVHAAAL   84 (324)
T ss_pred             CEEEECccc
Confidence            999999874

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK04148 hypothetical protein; Provisional

Probab=95.87  E-value=0.11  Score=39.93  Aligned_cols=94  Identities=19%  Similarity=0.199  Sum_probs=61.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe----CCccc-------------
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT----ESQLE-------------  248 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~----~~~~~-------------  248 (288)
                      -.++.++++.|. | .|...+..+...|.+|+++.    .+++..+.+++.+.+.+.+    .+...             
T Consensus        14 ~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaID----i~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp   87 (134)
T PRK04148         14 KGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVID----INEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPP   87 (134)
T ss_pred             cccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCC
Confidence            345688999999 6 88756666667899999998    6888888888777654433    22110             


Q ss_pred             ---HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCe
Q 023007          249 ---VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREE  286 (288)
Q Consensus       249 ---~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~  286 (288)
                         ...+.++.+.-+ .|++|-..+++....-+++...+|.
T Consensus        88 ~el~~~~~~la~~~~-~~~~i~~l~~e~~~~~~kl~ny~~~  127 (134)
T PRK04148         88 RDLQPFILELAKKIN-VPLIIKPLSGEEPIKELKLINYKGK  127 (134)
T ss_pred             HHHHHHHHHHHHHcC-CCEEEEcCCCCCCCcceEEEecCCe
Confidence               123444444444 7788877777765555666665554

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=95.86  E-value=0.099  Score=46.97  Aligned_cols=47  Identities=15%  Similarity=0.116  Sum_probs=37.3

Q ss_pred             HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      |||.-++....++ +++|+|+|++|-+|...+..+...|.+|+++.+.
T Consensus         2 ~~~~~~~~~~~~~-~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~   48 (348)
T PRK15181          2 TAYEELRTKLVLA-PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNF   48 (348)
T ss_pred             chhhhhhhccccc-CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5666665444444 4789999999999999999999999999988753

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=95.85  E-value=0.069  Score=47.16  Aligned_cols=35  Identities=20%  Similarity=0.460  Sum_probs=31.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+++|||+|++|.+|...+..+...|.+|+++++.
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~   37 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD   37 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence            35789999999999999999999999999988854

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=95.85  E-value=0.057  Score=47.52  Aligned_cols=80  Identities=13%  Similarity=0.118  Sum_probs=45.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      +|||+|++|.+|...++.+...|.+|+++.+......++.....+.+.-..+..+-.+.+.+....... ++|+||+|+|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vv~~ag   79 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEH-KIDAVIHFAG   79 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhC-CCcEEEECcc
Confidence            489999999999999999988999988765321111222222111111112221111222333332222 4999999997


Q ss_pred             c
Q 023007          271 G  271 (288)
Q Consensus       271 ~  271 (288)
                      .
T Consensus        80 ~   80 (328)
T TIGR01179        80 L   80 (328)
T ss_pred             c
Confidence            4

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02214 cinnamoyl-CoA reductase

Probab=95.84  E-value=0.078  Score=47.57  Aligned_cols=36  Identities=22%  Similarity=0.444  Sum_probs=31.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .++++|+|+|++|.+|...+..+...|.+|+++++.
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~   43 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRN   43 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            356899999999999999999999999999998853

>PLN00198 anthocyanidin reductase; Provisional

Probab=95.82  E-value=0.069  Score=47.69  Aligned_cols=80  Identities=16%  Similarity=0.280  Sum_probs=48.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC---CCCEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL---GADEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      ..+++|||+|++|.+|...+..+...|++|+++++... .......+..+   +--.++..+-.+.+.+.+...   ++|
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d   82 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE-NQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA---GCD   82 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC-CHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh---cCC
Confidence            34789999999999999999999999999988875421 11111112222   211222222112233444443   399


Q ss_pred             EEEECCC
Q 023007          264 LGFNCVG  270 (288)
Q Consensus       264 ~v~d~~g  270 (288)
                      +||++++
T Consensus        83 ~vih~A~   89 (338)
T PLN00198         83 LVFHVAT   89 (338)
T ss_pred             EEEEeCC
Confidence            9999987

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.82  E-value=0.057  Score=43.02  Aligned_cols=84  Identities=19%  Similarity=0.229  Sum_probs=60.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc----cHHHHHHH-hcCCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL----EVKNVKGL-LANLPE  261 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~----~~~~i~~~-~~~~g~  261 (288)
                      .+|--.+|+|+++++|.++++-+...|+.++...-.   +....+.++++|-..++...+-    ++.....+ ...+|.
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp---~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgr   83 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLP---QSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGR   83 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCC---cccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccc
Confidence            345556899999999999999999999999888632   4455678899998888776442    23222222 233456


Q ss_pred             ccEEEECCCccc
Q 023007          262 PALGFNCVGGNS  273 (288)
Q Consensus       262 ~D~v~d~~g~~~  273 (288)
                      +|+.+||.|...
T Consensus        84 ld~~vncagia~   95 (260)
T KOG1199|consen   84 LDALVNCAGIAY   95 (260)
T ss_pred             eeeeeeccceee
Confidence            999999999643

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.81  E-value=0.059  Score=48.35  Aligned_cols=82  Identities=13%  Similarity=0.202  Sum_probs=50.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC------------------HHHH----HHHHhCCCCEEEeCC-
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS------------------DEAK----EKLKGLGADEVFTES-  245 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~------------------~~~~----~~~~~~g~~~v~~~~-  245 (288)
                      +.+|+|.|+ |++|..+++.+.+.|...+.++|.+.-.                  ..|.    +.++++..+--+... 
T Consensus        24 ~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~  102 (338)
T PRK12475         24 EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV  102 (338)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence            368999999 9999999999999999777766654200                  0111    334455443222111 


Q ss_pred             -cccHHHHHHHhcCCCCccEEEECCCcccH
Q 023007          246 -QLEVKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       246 -~~~~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                       +...+.+.++..+   +|+||||+.+...
T Consensus       103 ~~~~~~~~~~~~~~---~DlVid~~D~~~~  129 (338)
T PRK12475        103 TDVTVEELEELVKE---VDLIIDATDNFDT  129 (338)
T ss_pred             ccCCHHHHHHHhcC---CCEEEEcCCCHHH
Confidence             1112344555443   9999999987555

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.81  E-value=0.12  Score=45.04  Aligned_cols=54  Identities=19%  Similarity=0.241  Sum_probs=41.0

Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+|+.....+..+....---.|++|+|.|.+..+|.-++.++...|++|+++-+
T Consensus       137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s  190 (286)
T PRK14175        137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS  190 (286)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC
Confidence            455544445555555433457899999999777999999999999999998873

>PLN02650 dihydroflavonol-4-reductase

Probab=95.81  E-value=0.074  Score=47.76  Aligned_cols=35  Identities=20%  Similarity=0.422  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ..++|||+|++|.+|...+..+...|.+|+++++.
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~   38 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRD   38 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcC
Confidence            45789999999999999999999999999988754

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.80  E-value=0.062  Score=44.88  Aligned_cols=33  Identities=15%  Similarity=0.226  Sum_probs=28.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .+|+|.|+ |++|..+++.+.+.|...+.++|.+
T Consensus        29 ~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         29 AKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            68999999 9999999999999999877777654

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.78  E-value=0.068  Score=44.97  Aligned_cols=92  Identities=15%  Similarity=0.060  Sum_probs=60.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC--EEEeCCcccHHHHHHHhcCCCCccE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      -+|.+||=.|++|  |+++.-+|+. |++|+++.    .+++..+.++.-...  --++|+....+.+..   ..++||+
T Consensus        58 l~g~~vLDvGCGg--G~Lse~mAr~-Ga~VtgiD----~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~---~~~~FDv  127 (243)
T COG2227          58 LPGLRVLDVGCGG--GILSEPLARL-GASVTGID----ASEKPIEVAKLHALESGVNIDYRQATVEDLAS---AGGQFDV  127 (243)
T ss_pred             CCCCeEEEecCCc--cHhhHHHHHC-CCeeEEec----CChHHHHHHHHhhhhccccccchhhhHHHHHh---cCCCccE
Confidence            4788999999855  4555555554 89999997    688888877622111  114555543333333   2236999


Q ss_pred             EEEC-----CCccc--HHHHHhhccCCCeeC
Q 023007          265 GFNC-----VGGNS--ASKVLKFLRFREEQW  288 (288)
Q Consensus       265 v~d~-----~g~~~--~~~a~~~l~~~G~~v  288 (288)
                      |+..     +..+.  ...+.++++|+|.++
T Consensus       128 V~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf  158 (243)
T COG2227         128 VTCMEVLEHVPDPESFLRACAKLVKPGGILF  158 (243)
T ss_pred             EEEhhHHHccCCHHHHHHHHHHHcCCCcEEE
Confidence            9874     44433  377899999999864

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.76  E-value=0.073  Score=44.79  Aligned_cols=83  Identities=17%  Similarity=0.203  Sum_probs=54.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC---CCHHHH-----------------HHHHhCCCCEEEeCCccc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA---GSDEAK-----------------EKLKGLGADEVFTESQLE  248 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~---~~~~~~-----------------~~~~~~g~~~v~~~~~~~  248 (288)
                      ...|+|.|. |+||.+++..+.+.|+.-+.++|-+.   .+-++.                 +..+.+.+..=++..+.+
T Consensus        30 ~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f  108 (263)
T COG1179          30 QAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF  108 (263)
T ss_pred             hCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence            378999999 99999999999999997776665443   222221                 122233333323333332


Q ss_pred             --HHHHHHHhcCCCCccEEEECCCcccH
Q 023007          249 --VKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       249 --~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                        .+.+.++...  ++|.|+||.-+-..
T Consensus       109 ~t~en~~~~~~~--~~DyvIDaiD~v~~  134 (263)
T COG1179         109 ITEENLEDLLSK--GFDYVIDAIDSVRA  134 (263)
T ss_pred             hCHhHHHHHhcC--CCCEEEEchhhhHH
Confidence              2567777776  59999999887554

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=95.75  E-value=0.06  Score=45.40  Aligned_cols=79  Identities=14%  Similarity=0.067  Sum_probs=47.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCC-EEE--eCCcc-cHHH-HHHHhcCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD-EVF--TESQL-EVKN-VKGLLANLP  260 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~-~v~--~~~~~-~~~~-i~~~~~~~g  260 (288)
                      ++++|+|++|++|...++.+...|++|+++..   .++++.+    .++..+.. .++  |-.+. .++. +.+.....+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQ---QNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC---CChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            47999999999999999988889999987542   2333322    22333432 122  22111 2222 222222234


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|.+.|.
T Consensus        79 ~id~vi~~ag~   89 (247)
T PRK09730         79 PLAALVNNAGI   89 (247)
T ss_pred             CCCEEEECCCC
Confidence            59999999985

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.73  E-value=0.048  Score=48.71  Aligned_cols=35  Identities=20%  Similarity=0.274  Sum_probs=31.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++++|||+|++|.+|...++.+...|++|+++.+.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~   39 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRR   39 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecc
Confidence            46899999999999999999999999999998753

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.69  E-value=0.069  Score=47.91  Aligned_cols=81  Identities=12%  Similarity=0.208  Sum_probs=50.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCH------------------HH----HHHHHhCCCCEEEeCC--
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD------------------EA----KEKLKGLGADEVFTES--  245 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~------------------~~----~~~~~~~g~~~v~~~~--  245 (288)
                      .+|+|.|+ |++|..+++.+...|..-+.++|.+.-..                  .|    .+.++++..+--+...  
T Consensus        25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~  103 (339)
T PRK07688         25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ  103 (339)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            78999999 99999999999999996666665542000                  11    1233445433212111  


Q ss_pred             cccHHHHHHHhcCCCCccEEEECCCcccH
Q 023007          246 QLEVKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       246 ~~~~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                      +...+.+.++..+   +|+|+||+.+...
T Consensus       104 ~~~~~~~~~~~~~---~DlVid~~Dn~~~  129 (339)
T PRK07688        104 DVTAEELEELVTG---VDLIIDATDNFET  129 (339)
T ss_pred             cCCHHHHHHHHcC---CCEEEEcCCCHHH
Confidence            1112344455443   9999999988655

>TIGR00438 rrmJ cell division protein FtsJ

Probab=95.69  E-value=0.063  Score=43.78  Aligned_cols=96  Identities=11%  Similarity=0.052  Sum_probs=53.3

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHc-C-CeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc-cHHHHHHHhc
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR-G-IHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKNVKGLLA  257 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~i~~~~~  257 (288)
                      +...+++|++||.+|+ |.-+. +..+++.. + .+++++.    .++.+    +..+...+ .+..+. ..+.+.+...
T Consensus        26 ~~~~i~~g~~VLDiG~-GtG~~-~~~l~~~~~~~~~v~~vD----is~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~   95 (188)
T TIGR00438        26 KFKLIKPGDTVLDLGA-APGGW-SQVAVEQVGGKGRVIAVD----LQPMK----PIENVDFIRGDFTDEEVLNKIRERVG   95 (188)
T ss_pred             HhcccCCCCEEEEecC-CCCHH-HHHHHHHhCCCceEEEEe----ccccc----cCCCceEEEeeCCChhHHHHHHHHhC
Confidence            3456799999999999 44444 34444443 3 4677775    34332    11233322 122221 1234444444


Q ss_pred             CCCCccEEEE-C----CCc-------------ccHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFN-C----VGG-------------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d-~----~g~-------------~~~~~a~~~l~~~G~~v  288 (288)
                      +. ++|+|+. .    .|.             ..+..+.++|+|+|+++
T Consensus        96 ~~-~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv  143 (188)
T TIGR00438        96 DD-KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFV  143 (188)
T ss_pred             CC-CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence            43 3999995 2    221             12377889999999985

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=95.66  E-value=0.031  Score=49.25  Aligned_cols=82  Identities=13%  Similarity=0.121  Sum_probs=53.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHH--------------------HHHHHhCCCCEEEeCCccc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA--------------------KEKLKGLGADEVFTESQLE  248 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~--------------------~~~~~~~g~~~v~~~~~~~  248 (288)
                      ..+|||.|+ |++|.=|++++.+.|+..+.++|.+.-.-..                    ..+++.+...--++....+
T Consensus        66 ~s~VLVVGa-GGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~~y~~~  144 (427)
T KOG2017|consen   66 NSSVLVVGA-GGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQTYNEF  144 (427)
T ss_pred             CccEEEEcc-CCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceeeechhh
Confidence            368999999 9999999999999999988888765411111                    1233444433222222221


Q ss_pred             --HHHHHHHhcCCCCccEEEECCCcccH
Q 023007          249 --VKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       249 --~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                        .....++.++   +|+|+||+-+..+
T Consensus       145 L~~sNa~~Ii~~---YdvVlDCTDN~~T  169 (427)
T KOG2017|consen  145 LSSSNAFDIIKQ---YDVVLDCTDNVPT  169 (427)
T ss_pred             ccchhHHHHhhc---cceEEEcCCCccc
Confidence              2344444454   9999999988665

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.66  E-value=0.25  Score=36.52  Aligned_cols=75  Identities=17%  Similarity=0.170  Sum_probs=55.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~  271 (288)
                      |+|.|. |.+|...++.++..+.+++++.    .++++.+.+++.|. .++..+..+.+.+++..-.  +.+.++-++++
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid----~d~~~~~~~~~~~~-~~i~gd~~~~~~l~~a~i~--~a~~vv~~~~~   72 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVID----RDPERVEELREEGV-EVIYGDATDPEVLERAGIE--KADAVVILTDD   72 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEE----SSHHHHHHHHHTTS-EEEES-TTSHHHHHHTTGG--CESEEEEESSS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEE----CCcHHHHHHHhccc-ccccccchhhhHHhhcCcc--ccCEEEEccCC
Confidence            678899 9999999999999776888888    68888888888884 4555555555556554333  48888888887


Q ss_pred             ccH
Q 023007          272 NSA  274 (288)
Q Consensus       272 ~~~  274 (288)
                      +..
T Consensus        73 d~~   75 (116)
T PF02254_consen   73 DEE   75 (116)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            655

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=95.62  E-value=0.032  Score=47.90  Aligned_cols=74  Identities=15%  Similarity=0.100  Sum_probs=51.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      +|||+|+||- |...+..+...|.+|++++.    ++...+.+...|...+....-+ .+.+.++....+ +|+|||++.
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~----t~~~~~~~~~~g~~~v~~g~l~-~~~l~~~l~~~~-i~~VIDAtH   74 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVT----TSEGKHLYPIHQALTVHTGALD-PQELREFLKRHS-IDILVDATH   74 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEc----cCCccccccccCCceEEECCCC-HHHHHHHHHhcC-CCEEEEcCC
Confidence            6999999776 98888877788999999994    4555555556665555433322 234656555544 999999987


Q ss_pred             c
Q 023007          271 G  271 (288)
Q Consensus       271 ~  271 (288)
                      .
T Consensus        75 P   75 (256)
T TIGR00715        75 P   75 (256)
T ss_pred             H
Confidence            5

This enzyme was found to be a monomer by gel filtration.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.62  E-value=0.1  Score=43.34  Aligned_cols=86  Identities=14%  Similarity=0.088  Sum_probs=52.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++|+|.|+ |.+|..-++.+...|++|+++...  .+++-.++ .+.|--..+ .++.....    ..   ++|+||-
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~--~~~~l~~l-~~~~~i~~~-~~~~~~~d----l~---~~~lVi~   75 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEE--LESELTLL-AEQGGITWL-ARCFDADI----LE---GAFLVIA   75 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCC--CCHHHHHH-HHcCCEEEE-eCCCCHHH----hC---CcEEEEE
Confidence            4689999999 999999999999999999888643  23333333 333311111 12211111    12   3899999


Q ss_pred             CCCcccH-HHHHhhccCCC
Q 023007          268 CVGGNSA-SKVLKFLRFRE  285 (288)
Q Consensus       268 ~~g~~~~-~~a~~~l~~~G  285 (288)
                      +++.+.. .......+..|
T Consensus        76 at~d~~ln~~i~~~a~~~~   94 (205)
T TIGR01470        76 ATDDEELNRRVAHAARARG   94 (205)
T ss_pred             CCCCHHHHHHHHHHHHHcC
Confidence            9998755 33333333333

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.61  E-value=0.1  Score=44.48  Aligned_cols=34  Identities=15%  Similarity=0.173  Sum_probs=28.9

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|+++  ++|...+..+...|++|+++.+
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r   39 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYW   39 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcC
Confidence            458899999984  8999988888888999998874

>PRK08328 hypothetical protein; Provisional

Probab=95.61  E-value=0.078  Score=44.89  Aligned_cols=34  Identities=15%  Similarity=0.225  Sum_probs=29.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      +.+|+|.|+ |++|..+++.+.+.|..-+.++|.+
T Consensus        27 ~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         27 KAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            378999999 9999999999999999877777644

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.61  E-value=0.35  Score=39.98  Aligned_cols=47  Identities=21%  Similarity=0.207  Sum_probs=37.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGA  238 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~  238 (288)
                      -.|++++|+|. |.+|..+++.+...|++|+++.    .++++.+.+. .+|.
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D----~~~~~~~~~~~~~g~   73 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVAD----INEEAVARAAELFGA   73 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHHcCC
Confidence            46789999999 8999999999999999999665    4566655543 4454

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=95.58  E-value=0.14  Score=45.65  Aligned_cols=80  Identities=9%  Similarity=0.069  Sum_probs=46.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC-C-EEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-D-EVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~-~-~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      +|+|+|++|.+|...+..+...|.+|+++.+...........+.+++. . .++..+-.+.+.+....... ++|+||++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vvh~   80 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDH-AIDTVIHF   80 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcC-CCCEEEEC
Confidence            589999999999999988888899999875321111221222223321 1 12222222223444433332 39999999


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      .+.
T Consensus        81 a~~   83 (338)
T PRK10675         81 AGL   83 (338)
T ss_pred             Ccc
Confidence            864

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.58  E-value=0.09  Score=45.59  Aligned_cols=48  Identities=15%  Similarity=0.081  Sum_probs=34.9

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE  231 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  231 (288)
                      ++.+.....++++++|+|+ |++|.+++..+...|++++++.    +++++.+
T Consensus       107 ~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~----R~~~~~~  154 (270)
T TIGR00507       107 DLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIAN----RTVSKAE  154 (270)
T ss_pred             HHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEe----CCHHHHH
Confidence            3433233456789999999 8999998888888899888776    3455543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.55  E-value=0.15  Score=46.61  Aligned_cols=86  Identities=19%  Similarity=0.264  Sum_probs=57.5

Q ss_pred             HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCCEEEeCCcccHHHHHH
Q 023007          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~i~~  254 (288)
                      |..-..+...--.++++||+|+ |-+|..++..+...|.+.+.++.   ++.++. ++++++|...+      .++.+..
T Consensus       165 Av~lA~~~~~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaN---RT~erA~~La~~~~~~~~------~l~el~~  234 (414)
T COG0373         165 AVELAKRIFGSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIAN---RTLERAEELAKKLGAEAV------ALEELLE  234 (414)
T ss_pred             HHHHHHHHhcccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEc---CCHHHHHHHHHHhCCeee------cHHHHHH
Confidence            4433334334346789999999 99999999999999975555542   455554 45678884322      1234444


Q ss_pred             HhcCCCCccEEEECCCcccH
Q 023007          255 LLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~  274 (288)
                      ..+.   +|+||.++|.+..
T Consensus       235 ~l~~---~DvVissTsa~~~  251 (414)
T COG0373         235 ALAE---ADVVISSTSAPHP  251 (414)
T ss_pred             hhhh---CCEEEEecCCCcc
Confidence            4443   9999999998653

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=95.54  E-value=0.086  Score=51.86  Aligned_cols=80  Identities=16%  Similarity=0.135  Sum_probs=49.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-Hh----CCCCE--EE--eCCc-ccHHH-HHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KG----LGADE--VF--TESQ-LEVKN-VKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~----~g~~~--v~--~~~~-~~~~~-i~~~~  256 (288)
                      .++++||+|++|++|.+.++.+...|++|+++.+    +.++.+.+ .+    .+...  .+  |-.+ ..++. +.+..
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r----~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADL----NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC----CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4789999999999999999888888999999884    44443322 11    23221  11  2111 11222 22222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|++|+|.|.
T Consensus       489 ~~~g~iDilV~nAG~  503 (676)
T TIGR02632       489 LAYGGVDIVVNNAGI  503 (676)
T ss_pred             HhcCCCcEEEECCCC
Confidence            233459999999984

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.52  E-value=0.079  Score=46.34  Aligned_cols=42  Identities=19%  Similarity=0.128  Sum_probs=31.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~  233 (288)
                      ..+++|+|+|+ |+.|.+++..+...|++ ++++.    .+.++.+.+
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~n----R~~~ka~~l  167 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFD----VDPARAAAL  167 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHH
Confidence            35689999999 99999999999999985 54554    455555433

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.52  E-value=0.094  Score=44.82  Aligned_cols=35  Identities=11%  Similarity=0.190  Sum_probs=30.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA  224 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~  224 (288)
                      ..+|+|.|+ |++|..++..+.+.|...+.++|.+.
T Consensus        32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            379999999 99999999999999998777776554

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.52  E-value=0.14  Score=43.59  Aligned_cols=34  Identities=12%  Similarity=0.185  Sum_probs=29.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA  224 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~  224 (288)
                      .+|+|.|+ |++|..+++.+.+.|...+.++|.+.
T Consensus        25 ~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        25 SRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            78999999 99999999999999998777776544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.52  E-value=0.1  Score=42.68  Aligned_cols=93  Identities=14%  Similarity=0.050  Sum_probs=55.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHHHHHhcCC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLANL  259 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i~~~~~~~  259 (288)
                      .++++.+||-.|+  +.|..++.+++. .+++|+++.    .+++..+.+    ++.+.+.+ .....+...+   ... 
T Consensus        42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD----~s~~~l~~A~~~~~~~~l~~i-~~~~~d~~~~---~~~-  110 (187)
T PRK00107         42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVD----SLGKKIAFLREVAAELGLKNV-TVVHGRAEEF---GQE-  110 (187)
T ss_pred             hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEe----CcHHHHHHHHHHHHHcCCCCE-EEEeccHhhC---CCC-
Confidence            3556899999988  334555555554 467888886    466665554    34555432 1111112222   222 


Q ss_pred             CCccEEEECCCc---ccHHHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGG---NSASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~---~~~~~a~~~l~~~G~~v  288 (288)
                      +.+|+|+-....   ..+..+.++|+|+|+++
T Consensus       111 ~~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv  142 (187)
T PRK00107        111 EKFDVVTSRAVASLSDLVELCLPLLKPGGRFL  142 (187)
T ss_pred             CCccEEEEccccCHHHHHHHHHHhcCCCeEEE
Confidence            259998875433   22377889999999985

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=95.51  E-value=0.08  Score=46.38  Aligned_cols=78  Identities=13%  Similarity=0.123  Sum_probs=44.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHhCC---CCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLG---ADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      +|+|+|++|.+|...++.+...|  .+|+++.+..  ...+.+.+..+.   --.++..+-.+.+.+.++..+.. +|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLT--YAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQ-PDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCC--cchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcC-CCEE
Confidence            58999999999999999887766  6787765321  111112222221   11222222222344555444433 9999


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      |+|.+.
T Consensus        78 i~~a~~   83 (317)
T TIGR01181        78 VHFAAE   83 (317)
T ss_pred             EEcccc
Confidence            999975

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.50  E-value=0.093  Score=44.38  Aligned_cols=82  Identities=13%  Similarity=0.196  Sum_probs=50.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHH--------------------HHHHHhCCCCEEEeCCccc-
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA--------------------KEKLKGLGADEVFTESQLE-  248 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~--------------------~~~~~~~g~~~v~~~~~~~-  248 (288)
                      .+|+|.|. |++|..+++.+.+.|..-+.++|.+.-.+..                    .+.++++..+.-+.....+ 
T Consensus        12 ~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i   90 (231)
T cd00755          12 AHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFL   90 (231)
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeec
Confidence            68999999 9999999999999999877777655322211                    1222333333222221111 


Q ss_pred             -HHHHHHHhcCCCCccEEEECCCcccH
Q 023007          249 -VKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       249 -~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                       .+...++...  ++|+|+||..+...
T Consensus        91 ~~~~~~~l~~~--~~D~VvdaiD~~~~  115 (231)
T cd00755          91 TPDNSEDLLGG--DPDFVVDAIDSIRA  115 (231)
T ss_pred             CHhHHHHHhcC--CCCEEEEcCCCHHH
Confidence             1334444433  49999999987554

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.49  E-value=0.079  Score=44.33  Aligned_cols=35  Identities=26%  Similarity=0.335  Sum_probs=31.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++++++|+|++|++|...++.+...|++|+.+.+.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~   36 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS   36 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999999999999999999854

>PRK07069 short chain dehydrogenase; Validated

Probab=95.46  E-value=0.057  Score=45.70  Aligned_cols=31  Identities=16%  Similarity=0.143  Sum_probs=27.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +++|+|++|++|...++.+...|++|+++.+
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r   31 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDI   31 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            3899999999999988888888999998885

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=95.45  E-value=0.095  Score=46.89  Aligned_cols=81  Identities=14%  Similarity=0.231  Sum_probs=48.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-CHHHHHHHH-hC----CCC-EEEeCCcccHHHHHHHhcCCCCc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKEKLK-GL----GAD-EVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~~~~-~~----g~~-~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      ++|||+|++|.+|...++.+...|.+|+++.+.... ..++.+.+. ..    +.. .++..+-.+.+.+.+...+.+ +
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~-~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK-P   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC-C
Confidence            479999999999999999999999999998753210 012222211 11    110 111111112334555444433 8


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |+||.+++.
T Consensus        80 d~ViH~Aa~   88 (343)
T TIGR01472        80 TEIYNLAAQ   88 (343)
T ss_pred             CEEEECCcc
Confidence            999999874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02366 spermidine synthase

Probab=95.45  E-value=0.14  Score=45.24  Aligned_cols=95  Identities=16%  Similarity=0.046  Sum_probs=53.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCC-EEE-eCC-----cccHHHHHHHhcC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGAD-EVF-TES-----QLEVKNVKGLLAN  258 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~-~v~-~~~-----~~~~~~i~~~~~~  258 (288)
                      ...++||++|+ |. |..+..++++.+...+.+++   .+++-.+.+++ +... ..+ +.+     .+..+.+.+..++
T Consensus        90 ~~pkrVLiIGg-G~-G~~~rellk~~~v~~V~~VE---iD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~  164 (308)
T PLN02366         90 PNPKKVLVVGG-GD-GGVLREIARHSSVEQIDICE---IDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEG  164 (308)
T ss_pred             CCCCeEEEEcC-Cc-cHHHHHHHhCCCCCeEEEEE---CCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCC
Confidence            45689999999 44 66777888876665444444   35665666654 2110 001 111     1111223332222


Q ss_pred             CCCccEEEECCCc-----------ccHHHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCVGG-----------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~g~-----------~~~~~a~~~l~~~G~~v  288 (288)
                        ++|+||--...           +.++.+.++|+++|.++
T Consensus       165 --~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv  203 (308)
T PLN02366        165 --TYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVC  203 (308)
T ss_pred             --CCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEE
Confidence              49987764332           22477889999999984

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.43  E-value=0.044  Score=43.46  Aligned_cols=79  Identities=10%  Similarity=0.124  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++|+|.|+ |.+|..-++.+...|++|+++..      +..+.+.+++.-. +..+.....       +..+.|+||-
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp------~~~~~l~~l~~i~-~~~~~~~~~-------dl~~a~lVia   76 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP------EICKEMKELPYIT-WKQKTFSND-------DIKDAHLIYA   76 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC------ccCHHHHhccCcE-EEecccChh-------cCCCceEEEE
Confidence            5689999999 99999988888889999998842      1222233343211 111111101       1113899999


Q ss_pred             CCCcccHHHHHhhc
Q 023007          268 CVGGNSASKVLKFL  281 (288)
Q Consensus       268 ~~g~~~~~~a~~~l  281 (288)
                      +++++..+..+...
T Consensus        77 aT~d~e~N~~i~~~   90 (157)
T PRK06719         77 ATNQHAVNMMVKQA   90 (157)
T ss_pred             CCCCHHHHHHHHHH
Confidence            99988875555433

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.42  E-value=0.064  Score=44.98  Aligned_cols=34  Identities=15%  Similarity=0.206  Sum_probs=30.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|++|++|...+..+...|++|+++.+
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r   37 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDK   37 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            4679999999999999999888888999998874

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.41  E-value=0.039  Score=46.19  Aligned_cols=75  Identities=19%  Similarity=0.234  Sum_probs=47.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      |||+|++|-+|...+..+...|.+|+.+.+..  .++.. .........+ .|..  +.+.+.++..... +|.||.+.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~--~~~~~-~~~~~~~~~~~~dl~--~~~~~~~~~~~~~-~d~vi~~a~   74 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSS--NSESF-EEKKLNVEFVIGDLT--DKEQLEKLLEKAN-IDVVIHLAA   74 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCS--TGGHH-HHHHTTEEEEESETT--SHHHHHHHHHHHT-ESEEEEEBS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccc--ccccc-ccccceEEEEEeecc--ccccccccccccC-ceEEEEeec
Confidence            79999999999999999999999999888542  22211 1122222211 2222  2234444433323 899999988


Q ss_pred             cc
Q 023007          271 GN  272 (288)
Q Consensus       271 ~~  272 (288)
                      ..
T Consensus        75 ~~   76 (236)
T PF01370_consen   75 FS   76 (236)
T ss_dssp             SS
T ss_pred             cc
Confidence            64

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.37  E-value=0.072  Score=46.52  Aligned_cols=76  Identities=9%  Similarity=-0.059  Sum_probs=46.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHH-HhCCCC-EEEeCCcccHHHHHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKL-KGLGAD-EVFTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      ++++++|+|+ |+.+.+++..+...|++ ++++.    ++.++.+.+ ++++.. .+....  ..+.+.....   .+|+
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~n----Rt~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~---~~Di  193 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVIN----RNPDKLSRLVDLGVQVGVITRLE--GDSGGLAIEK---AAEV  193 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHHhhhcCcceecc--chhhhhhccc---CCCE
Confidence            5789999999 99999999999999985 55665    456665544 344321 111000  0011111112   3899


Q ss_pred             EEECCCccc
Q 023007          265 GFNCVGGNS  273 (288)
Q Consensus       265 v~d~~g~~~  273 (288)
                      ||+|++...
T Consensus       194 VInaTp~g~  202 (282)
T TIGR01809       194 LVSTVPADV  202 (282)
T ss_pred             EEECCCCCC
Confidence            999987543

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN02583 cinnamoyl-CoA reductase

Probab=95.34  E-value=0.19  Score=44.03  Aligned_cols=35  Identities=20%  Similarity=0.265  Sum_probs=31.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .++++|+|+|++|.+|...++.+...|++|+++.+
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R   38 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQ   38 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence            35679999999999999999999999999999885

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.34  E-value=0.16  Score=43.95  Aligned_cols=35  Identities=23%  Similarity=0.266  Sum_probs=29.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .+.+|+|.|+ |++|..++..+.+.|..-+.++|.+
T Consensus        29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3478999999 9999999999999997666666544

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.32  E-value=0.13  Score=44.98  Aligned_cols=60  Identities=22%  Similarity=0.392  Sum_probs=52.2

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES  245 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~  245 (288)
                      +.++||. .+|-+.+|.+|.+.+.+|+.+|++++++.... .+.++.+.++.+|+.-+....
T Consensus        57 G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~-~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          57 GLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPET-MSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             CCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHcCCEEEEcCC
Confidence            6799998 55678889999999999999999999998654 689999999999998887665

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.28  E-value=0.1  Score=42.06  Aligned_cols=32  Identities=16%  Similarity=0.273  Sum_probs=26.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      +|+|.|+ |++|...++.+.+.|..-+.++|.+
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D   32 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFD   32 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4899999 9999999999999999766666554

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.27  E-value=0.12  Score=46.81  Aligned_cols=81  Identities=19%  Similarity=0.143  Sum_probs=50.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCH----------------HH----HHHHHhCCCCEEEeCCcc--
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD----------------EA----KEKLKGLGADEVFTESQL--  247 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~----------------~~----~~~~~~~g~~~v~~~~~~--  247 (288)
                      .+|+|.|+ |++|..+++.+...|..-+.++|.+.-..                .|    .+.++++..+--+.....  
T Consensus        29 ~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i  107 (355)
T PRK05597         29 AKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRL  107 (355)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeec
Confidence            79999999 99999999999999998887776543111                11    123344444322222111  


Q ss_pred             cHHHHHHHhcCCCCccEEEECCCcccH
Q 023007          248 EVKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                      ..+...++..   ++|+|+||+.+...
T Consensus       108 ~~~~~~~~~~---~~DvVvd~~d~~~~  131 (355)
T PRK05597        108 TWSNALDELR---DADVILDGSDNFDT  131 (355)
T ss_pred             CHHHHHHHHh---CCCEEEECCCCHHH
Confidence            1123334443   39999999987554

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=95.24  E-value=0.16  Score=44.51  Aligned_cols=142  Identities=15%  Similarity=0.170  Sum_probs=78.0

Q ss_pred             CCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHH--HHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR--MLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~--~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      -.+.|++++..+    .|.+|..-.....+++.+++.|-    ......|+++  ++.+  .+++|++|+=.|+  +.|.
T Consensus       108 P~rig~~f~I~P----sw~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~--~~~~g~~vlDvGc--GSGI  175 (300)
T COG2264         108 PVRIGERFVIVP----SWREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEK--LLKKGKTVLDVGC--GSGI  175 (300)
T ss_pred             cEEeeeeEEECC----CCccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHH--hhcCCCEEEEecC--ChhH
Confidence            366788888765    55665333346677887777553    3333444432  3332  3568999998887  4566


Q ss_pred             HHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc----ccH
Q 023007          204 CIIQIARHRGIH-SINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG----NSA  274 (288)
Q Consensus       204 ~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~----~~~  274 (288)
                      ++|..++. |+. ++++ |.   ++...+..+    .-+.... .....+ .......++  ++|+|+-+.=-    ...
T Consensus       176 LaIAa~kL-GA~~v~g~-Di---Dp~AV~aa~eNa~~N~v~~~-~~~~~~-~~~~~~~~~--~~DvIVANILA~vl~~La  246 (300)
T COG2264         176 LAIAAAKL-GAKKVVGV-DI---DPQAVEAARENARLNGVELL-VQAKGF-LLLEVPENG--PFDVIVANILAEVLVELA  246 (300)
T ss_pred             HHHHHHHc-CCceEEEe-cC---CHHHHHHHHHHHHHcCCchh-hhcccc-cchhhcccC--cccEEEehhhHHHHHHHH
Confidence            66665554 776 5555 43   444444433    2333320 000000 011111122  59999877532    222


Q ss_pred             HHHHhhccCCCeeC
Q 023007          275 SKVLKFLRFREEQW  288 (288)
Q Consensus       275 ~~a~~~l~~~G~~v  288 (288)
                      ....++++|+|+++
T Consensus       247 ~~~~~~lkpgg~lI  260 (300)
T COG2264         247 PDIKRLLKPGGRLI  260 (300)
T ss_pred             HHHHHHcCCCceEE
Confidence            67788999999874

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=95.24  E-value=0.12  Score=46.30  Aligned_cols=80  Identities=6%  Similarity=0.133  Sum_probs=45.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC--CCC-EEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL--GAD-EVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~--g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++|||+|++|.+|...++.+...|.+++++.+... .......+..+  +.. .++..+-.+.+.+.+...+. ++|+||
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~D~Vi   79 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLT-YAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-QPDCVM   79 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCc-cccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-CCCEEE
Confidence            47999999999999999999999988766654211 11111111111  111 11211111223444444333 399999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      +|.+.
T Consensus        80 h~A~~   84 (355)
T PRK10217         80 HLAAE   84 (355)
T ss_pred             ECCcc
Confidence            99874

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.20  E-value=0.051  Score=44.77  Aligned_cols=92  Identities=10%  Similarity=0.057  Sum_probs=54.7

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccHHHHHHHhcCC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLANL  259 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~i~~~~~~~  259 (288)
                      ....++.+||-.|+  +.|..+..+++. |.+|+++.    .+++..+.++    ..+...+. ....+   +....-. 
T Consensus        26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD----~S~~~i~~a~~~~~~~~~~~v~-~~~~d---~~~~~~~-   93 (197)
T PRK11207         26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWD----KNPMSIANLERIKAAENLDNLH-TAVVD---LNNLTFD-   93 (197)
T ss_pred             cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEe----CCHHHHHHHHHHHHHcCCCcce-EEecC---hhhCCcC-
Confidence            44556789999988  447777778775 88998886    5676665554    23332111 11111   1111111 


Q ss_pred             CCccEEEECCCc---------ccHHHHHhhccCCCee
Q 023007          260 PEPALGFNCVGG---------NSASKVLKFLRFREEQ  287 (288)
Q Consensus       260 g~~D~v~d~~g~---------~~~~~a~~~l~~~G~~  287 (288)
                      +.+|+|+.+..-         ..+....+.|+|+|.+
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~  130 (197)
T PRK11207         94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYN  130 (197)
T ss_pred             CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEE
Confidence            149999876431         1226677899999984

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.18  E-value=0.21  Score=42.06  Aligned_cols=83  Identities=19%  Similarity=0.252  Sum_probs=59.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HH-hCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      +++|.|+ |.+|...++.+...|..|+.+.    .++++.+. +. +++ .+++..+..+.+.++++--.  .+|+++=+
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id----~d~~~~~~~~~~~~~-~~~v~gd~t~~~~L~~agi~--~aD~vva~   73 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLID----RDEERVEEFLADELD-THVVIGDATDEDVLEEAGID--DADAVVAA   73 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEE----cCHHHHHHHhhhhcc-eEEEEecCCCHHHHHhcCCC--cCCEEEEe
Confidence            5789999 9999999999999999999998    56777665 33 244 34555555554555554222  49999999


Q ss_pred             CCcccHHHHHhhc
Q 023007          269 VGGNSASKVLKFL  281 (288)
Q Consensus       269 ~g~~~~~~a~~~l  281 (288)
                      +|++..+..+-++
T Consensus        74 t~~d~~N~i~~~l   86 (225)
T COG0569          74 TGNDEVNSVLALL   86 (225)
T ss_pred             eCCCHHHHHHHHH
Confidence            9987765544433

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2

Probab=95.16  E-value=0.19  Score=43.00  Aligned_cols=34  Identities=15%  Similarity=0.199  Sum_probs=31.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      -+|.+|+|.|- |.+|+.+++++..+|++++.+++
T Consensus        36 l~g~~vaIqGf-GnVG~~~a~~L~e~GakvvaVsD   69 (254)
T cd05313          36 LKGKRVAISGS-GNVAQYAAEKLLELGAKVVTLSD   69 (254)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEC
Confidence            46889999999 99999999999999999998885

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.15  E-value=0.17  Score=44.00  Aligned_cols=42  Identities=21%  Similarity=0.164  Sum_probs=33.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~  233 (288)
                      ..+++++|+|+ |++|.+++..+...| .+++++.    ++.++.+.+
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~----R~~~~a~~l  163 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVN----RTVERAEEL  163 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHH
Confidence            45689999998 999999999999999 5777777    456665444

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.14  E-value=0.067  Score=52.47  Aligned_cols=79  Identities=15%  Similarity=0.177  Sum_probs=53.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-----------------CHHHHHHHHhCCCCEEEeCCc---
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-----------------SDEAKEKLKGLGADEVFTESQ---  246 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-----------------~~~~~~~~~~~g~~~v~~~~~---  246 (288)
                      ..|++|+|+|+ |+.|+.++..+...|++|+++.+.+..                 -+...+.++++|.+...+..-   
T Consensus       325 ~~~~~VaIIGa-GpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGA-GPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            35889999999 999999999999999998888643210                 012345667788765444321   


Q ss_pred             ccHHHHHHHhcCCCCccEEEECCCcc
Q 023007          247 LEVKNVKGLLANLPEPALGFNCVGGN  272 (288)
Q Consensus       247 ~~~~~i~~~~~~~g~~D~v~d~~g~~  272 (288)
                      ..++.+   ..   ++|.||.++|..
T Consensus       404 i~~~~~---~~---~~DavilAtGa~  423 (654)
T PRK12769        404 ISLESL---LE---DYDAVFVGVGTY  423 (654)
T ss_pred             CCHHHH---Hh---cCCEEEEeCCCC
Confidence            112222   22   399999999863

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.13  E-value=0.39  Score=40.46  Aligned_cols=97  Identities=15%  Similarity=0.102  Sum_probs=55.2

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe---EEEEEcCC---CCC-----HHHHHHHHhCCCCEEEeCCcc
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH---SINIIRDR---AGS-----DEAKEKLKGLGADEVFTESQL  247 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~---vi~~~~~~---~~~-----~~~~~~~~~~g~~~v~~~~~~  247 (288)
                      +++....--++.+++|+|+ |+.|..++..+...|++   ++++.+..   ...     +.+.++++.++... ..   .
T Consensus        15 al~~~g~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~   89 (226)
T cd05311          15 ALKLVGKKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---G   89 (226)
T ss_pred             HHHHhCCCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---C
Confidence            4444333345689999999 99999999988889986   54554331   111     12234445544221 11   1


Q ss_pred             cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCe
Q 023007          248 EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREE  286 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~  286 (288)
                      .+.   +...   ++|++|++++...+ ...++.+.++..
T Consensus        90 ~l~---~~l~---~~dvlIgaT~~G~~~~~~l~~m~~~~i  123 (226)
T cd05311          90 TLK---EALK---GADVFIGVSRPGVVKKEMIKKMAKDPI  123 (226)
T ss_pred             CHH---HHHh---cCCEEEeCCCCCCCCHHHHHhhCCCCE
Confidence            111   1112   38999999975444 555666655543

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=95.07  E-value=0.11  Score=47.14  Aligned_cols=36  Identities=17%  Similarity=0.078  Sum_probs=32.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +..+++|||+|++|-+|...+..+...|.+|+++.+
T Consensus        18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r   53 (370)
T PLN02695         18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDW   53 (370)
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEe
Confidence            346789999999999999999999999999999874

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.07  E-value=0.5  Score=38.71  Aligned_cols=98  Identities=15%  Similarity=0.106  Sum_probs=55.5

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~i  252 (288)
                      +.....++++++|+=.|+  +.|..++.+++.. +.+++++.    .+++..+.++    +++.+.+  +..+..  +.+
T Consensus        32 l~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD----~s~~~~~~a~~n~~~~~~~~v~~~~~d~~--~~~  103 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIE----RDEEVVNLIRRNCDRFGVKNVEVIEGSAP--ECL  103 (196)
T ss_pred             HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHHHHhCCCCeEEEECchH--HHH
Confidence            344467788888877776  4455566666554 56888887    5677766554    4555432  222111  112


Q ss_pred             HHHhcCCCCccE-EEECCCc--ccHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPAL-GFNCVGG--NSASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~-v~d~~g~--~~~~~a~~~l~~~G~~v  288 (288)
                      ..+..   ..|. +++....  ..++.+.+.|+|+|+++
T Consensus       104 ~~~~~---~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li  139 (196)
T PRK07402        104 AQLAP---APDRVCIEGGRPIKEILQAVWQYLKPGGRLV  139 (196)
T ss_pred             hhCCC---CCCEEEEECCcCHHHHHHHHHHhcCCCeEEE
Confidence            12111   2444 4443222  22488889999999974

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.06  E-value=0.1  Score=48.69  Aligned_cols=77  Identities=22%  Similarity=0.237  Sum_probs=48.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .+++|+|+|+ |.+|+.++..+...|++|+++..... ..++..+.+.+.|...+.. +..+     +..+   ++|+||
T Consensus         4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~-~~~~-----~~~~---~~d~vv   73 (450)
T PRK14106          4 KGKKVLVVGA-GVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLG-EYPE-----EFLE---GVDLVV   73 (450)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeC-Ccch-----hHhh---cCCEEE
Confidence            4689999999 77999999999999999998874310 0011123445556542222 1111     1111   499999


Q ss_pred             ECCCcccH
Q 023007          267 NCVGGNSA  274 (288)
Q Consensus       267 d~~g~~~~  274 (288)
                      .+.|....
T Consensus        74 ~~~g~~~~   81 (450)
T PRK14106         74 VSPGVPLD   81 (450)
T ss_pred             ECCCCCCC
Confidence            99986544

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=95.05  E-value=0.14  Score=42.88  Aligned_cols=99  Identities=17%  Similarity=0.110  Sum_probs=63.4

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHH----HhCCCCEEEe-CC-cccHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGADEVFT-ES-QLEVKNVK  253 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~-~~-~~~~~~i~  253 (288)
                      .....++.++||=+|.  .+|..++++|..+.  .+++.+.    .++++.+.+    ++.|.+..+. .. .+..+.+.
T Consensus        53 ~L~~~~~~k~iLEiGT--~~GySal~mA~~l~~~g~l~tiE----~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~  126 (219)
T COG4122          53 LLARLSGPKRILEIGT--AIGYSALWMALALPDDGRLTTIE----RDEERAEIARENLAEAGVDDRIELLLGGDALDVLS  126 (219)
T ss_pred             HHHHhcCCceEEEeec--ccCHHHHHHHhhCCCCCeEEEEe----CCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHH
Confidence            3455677788888876  67888888888876  4455554    467776555    5678765322 22 12234444


Q ss_pred             HHhcCCCCccEEE-ECCCc---ccHHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGF-NCVGG---NSASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~-d~~g~---~~~~~a~~~l~~~G~~v  288 (288)
                      ....  +.||+|| |+.-.   +.++.++++|++||.+|
T Consensus       127 ~~~~--~~fDliFIDadK~~yp~~le~~~~lLr~GGliv  163 (219)
T COG4122         127 RLLD--GSFDLVFIDADKADYPEYLERALPLLRPGGLIV  163 (219)
T ss_pred             hccC--CCccEEEEeCChhhCHHHHHHHHHHhCCCcEEE
Confidence            4222  3599765 55543   33499999999999875

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=95.05  E-value=0.072  Score=46.98  Aligned_cols=73  Identities=18%  Similarity=0.330  Sum_probs=47.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      +|+|+|++|.+|...++.+...|.+|+++.+.    +++...+...+...+ ..+-.+.+.+.+...+   +|+||++.+
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~----~~~~~~~~~~~~~~~-~~D~~~~~~l~~~~~~---~d~vi~~a~   73 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRP----TSDRRNLEGLDVEIV-EGDLRDPASLRKAVAG---CRALFHVAA   73 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEec----CccccccccCCceEE-EeeCCCHHHHHHHHhC---CCEEEEece
Confidence            69999999999999999999999999999853    222222222333322 1121223445554443   899999886


Q ss_pred             c
Q 023007          271 G  271 (288)
Q Consensus       271 ~  271 (288)
                      .
T Consensus        74 ~   74 (328)
T TIGR03466        74 D   74 (328)
T ss_pred             e
Confidence            3

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.03  E-value=0.13  Score=46.82  Aligned_cols=35  Identities=14%  Similarity=0.195  Sum_probs=29.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .+.+|+|.|+ |++|..++..+.+.|..-+.++|.+
T Consensus       134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4578999999 9999999999999999777777654

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.03  E-value=0.085  Score=40.52  Aligned_cols=35  Identities=20%  Similarity=0.332  Sum_probs=29.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA  224 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~  224 (288)
                      ..+|+|.|+ |++|...+..+.+.|...+.++|.+.
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~   36 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDI   36 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcc
Confidence            468999999 99999999999999998777776554

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.02  E-value=0.12  Score=42.95  Aligned_cols=96  Identities=15%  Similarity=0.050  Sum_probs=55.0

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHHHHHhc
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i~~~~~  257 (288)
                      ...+++++++||=.|+  +.|..+..+++.. .+++.+.    .+++..+.+    ++.+.+.+-....+..+.   +..
T Consensus        72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd----~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~~~  141 (212)
T PRK00312         72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVE----RIKTLQWEAKRRLKQLGLHNVSVRHGDGWKG---WPA  141 (212)
T ss_pred             HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEe----CCHHHHHHHHHHHHHCCCCceEEEECCcccC---CCc
Confidence            3467889999999988  3355555555553 4777776    355555444    345544321111110010   111


Q ss_pred             CCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                       .+.+|+|+-...-... ....+.|+++|+++
T Consensus       142 -~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv  172 (212)
T PRK00312        142 -YAPFDRILVTAAAPEIPRALLEQLKEGGILV  172 (212)
T ss_pred             -CCCcCEEEEccCchhhhHHHHHhcCCCcEEE
Confidence             1249987765544444 77789999999974

>PLN02928 oxidoreductase family protein

Probab=95.01  E-value=0.097  Score=47.16  Aligned_cols=33  Identities=18%  Similarity=0.260  Sum_probs=30.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|+++.|+|. |.+|..+++.++.+|++|+++.+
T Consensus       158 ~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr  190 (347)
T PLN02928        158 FGKTVFILGY-GAIGIELAKRLRPFGVKLLATRR  190 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECC
Confidence            5789999999 99999999999999999998863

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.00  E-value=0.23  Score=42.33  Aligned_cols=33  Identities=15%  Similarity=0.162  Sum_probs=28.9

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEE
Q 023007          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~  220 (288)
                      +|++++|+|+++  ++|...+..+...|++|+++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~   39 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY   39 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence            578999999974  899999988889999998874

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=94.99  E-value=0.41  Score=44.41  Aligned_cols=35  Identities=17%  Similarity=0.289  Sum_probs=32.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      -+|++|+|.|. |.+|+.+++.+...|++|++++|.
T Consensus       235 l~Gk~VaVqG~-GnVg~~aa~~L~e~GakVVavSD~  269 (454)
T PTZ00079        235 LEGKTVVVSGS-GNVAQYAVEKLLQLGAKVLTMSDS  269 (454)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcC
Confidence            47899999999 999999999999999999988864

>PRK01581 speE spermidine synthase; Validated

Probab=94.97  E-value=0.29  Score=44.09  Aligned_cols=93  Identities=5%  Similarity=0.014  Sum_probs=53.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC-CCE----EE-eCCc----cc-HHHHHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-ADE----VF-TESQ----LE-VKNVKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-~~~----v~-~~~~----~~-~~~i~~~~  256 (288)
                      ..++|||+|+  +.|.++..+++..+...+..++   .+++-.+.++++. ...    .+ +.+-    .+ .+.+.. +
T Consensus       150 ~PkrVLIIGg--GdG~tlrelLk~~~v~~It~VE---IDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~  223 (374)
T PRK01581        150 DPKRVLILGG--GDGLALREVLKYETVLHVDLVD---LDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-P  223 (374)
T ss_pred             CCCEEEEECC--CHHHHHHHHHhcCCCCeEEEEe---CCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-c
Confidence            3479999997  4566777788766554444444   4777788877521 100    01 1111    11 122322 2


Q ss_pred             cCCCCccEEEECCCcc------------cHHHHHhhccCCCeeC
Q 023007          257 ANLPEPALGFNCVGGN------------SASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~~------------~~~~a~~~l~~~G~~v  288 (288)
                      ++  ++|+||--...+            .+..+.+.|+|+|.||
T Consensus       224 ~~--~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V  265 (374)
T PRK01581        224 SS--LYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFV  265 (374)
T ss_pred             CC--CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEE
Confidence            22  599876543221            3377889999999975

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.96  E-value=0.36  Score=42.16  Aligned_cols=43  Identities=23%  Similarity=0.307  Sum_probs=31.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~  233 (288)
                      ..+++++|+|+ |+.+.+++..+...|++.+.++.   ++.++.+.+
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~n---R~~~ka~~L  167 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVAD---LDTSRAQAL  167 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEc---CCHHHHHHH
Confidence            34789999999 99999988888889985544442   455555444

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.95  E-value=0.17  Score=41.75  Aligned_cols=33  Identities=12%  Similarity=0.151  Sum_probs=27.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .+|+|.|+ |++|...++.+.+.|..-+.++|.+
T Consensus        22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        22 ATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            68999999 9999999999999999655555554

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=94.94  E-value=0.12  Score=45.07  Aligned_cols=43  Identities=16%  Similarity=0.159  Sum_probs=33.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHH
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~  233 (288)
                      ..+|++++|.|+ |+.+.+++..+...|+ +++++.    ++.++.+.+
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~N----Rt~~ra~~L  166 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVN----RTRERAEEL  166 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHH
Confidence            446899999999 9999999999999997 566666    455555444

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=94.90  E-value=0.22  Score=44.60  Aligned_cols=74  Identities=7%  Similarity=0.025  Sum_probs=43.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .+|||+|++|-+|...++.+... |.+|+++.+    +.++...+....--.++..+-. +.+.+.++..   ++|+||.
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~d~ViH   74 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDM----QTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK---KCDVILP   74 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeC----cHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc---CCCEEEE
Confidence            36999999999999988888765 689998873    3333322211111122221111 1223333333   3999999


Q ss_pred             CCC
Q 023007          268 CVG  270 (288)
Q Consensus       268 ~~g  270 (288)
                      |.+
T Consensus        75 ~aa   77 (347)
T PRK11908         75 LVA   77 (347)
T ss_pred             Ccc
Confidence            865

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.87  E-value=0.15  Score=47.41  Aligned_cols=77  Identities=10%  Similarity=0.060  Sum_probs=49.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++++|+|+ |.+|++++.++...|++|++............+.+++.|.......+..   .+.   ..  .+|+||.
T Consensus         4 ~~k~v~v~G~-g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~---~~~---~~--~~d~vV~   74 (447)
T PRK02472          4 QNKKVLVLGL-AKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPL---ELL---DE--DFDLMVK   74 (447)
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCH---HHh---cC--cCCEEEE
Confidence            4688999999 6699999999999999999885332112233345566676543322221   111   11  2899999


Q ss_pred             CCCccc
Q 023007          268 CVGGNS  273 (288)
Q Consensus       268 ~~g~~~  273 (288)
                      +.|-+.
T Consensus        75 s~gi~~   80 (447)
T PRK02472         75 NPGIPY   80 (447)
T ss_pred             CCCCCC
Confidence            887544

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.86  E-value=0.11  Score=39.21  Aligned_cols=87  Identities=10%  Similarity=0.229  Sum_probs=47.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHh--CCCCEE-EeCCcccHHHHHHHhcCCCCccEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKG--LGADEV-FTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~--~g~~~v-~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +|.|+|++|-+|...++++... .++++.++.......++......  .+...+ +..  ...+.+    .   ++|+||
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~----~---~~Dvvf   71 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEEL----S---DVDVVF   71 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHH----T---TESEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHh----h---cCCEEE
Confidence            5899999999999988888875 45766666432111122222211  112211 211  111222    2   499999


Q ss_pred             ECCCcccH-HHHHhhccCCCe
Q 023007          267 NCVGGNSA-SKVLKFLRFREE  286 (288)
Q Consensus       267 d~~g~~~~-~~a~~~l~~~G~  286 (288)
                      .|++.... +.+-++++++-+
T Consensus        72 ~a~~~~~~~~~~~~~~~~g~~   92 (121)
T PF01118_consen   72 LALPHGASKELAPKLLKAGIK   92 (121)
T ss_dssp             E-SCHHHHHHHHHHHHHTTSE
T ss_pred             ecCchhHHHHHHHHHhhCCcE
Confidence            99998877 444444454433

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.84  E-value=0.17  Score=46.03  Aligned_cols=34  Identities=24%  Similarity=0.330  Sum_probs=29.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      ..+|+|.|+ |++|..++..+.+.|...+.++|.+
T Consensus        41 ~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         41 NARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            468999999 9999999999999999777776654

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.84  E-value=0.32  Score=42.59  Aligned_cols=34  Identities=21%  Similarity=0.143  Sum_probs=26.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~  221 (288)
                      -++++++|+|+ |+.+.+++..+...|+ +++++.+
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nR  156 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNR  156 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC
Confidence            36689999999 8888887777777898 5555554

>PLN03075 nicotianamine synthase; Provisional

Probab=94.83  E-value=0.2  Score=43.92  Aligned_cols=103  Identities=13%  Similarity=0.040  Sum_probs=61.8

Q ss_pred             HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHhC-----CCCEEEeCCcccH
Q 023007          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL-----GADEVFTESQLEV  249 (288)
Q Consensus       177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~-----g~~~v~~~~~~~~  249 (288)
                      +..+...... +.++|+-.|+ |..++.++.+++.+.  .+++.+.    .+++..+.+++.     |...-+..+..+ 
T Consensus       113 ~~~L~~~~~~-~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD----~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D-  185 (296)
T PLN03075        113 FDLLSQHVNG-VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFD----IDPSANDVARRLVSSDPDLSKRMFFHTAD-  185 (296)
T ss_pred             HHHHHHhhcC-CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEe----CCHHHHHHHHHHhhhccCccCCcEEEECc-
Confidence            3444443333 6799999999 989998888887553  4566666    577777766542     222111111111 


Q ss_pred             HHHHHHhcCCCCccEEEECC------Cccc--HHHHHhhccCCCeeC
Q 023007          250 KNVKGLLANLPEPALGFNCV------GGNS--ASKVLKFLRFREEQW  288 (288)
Q Consensus       250 ~~i~~~~~~~g~~D~v~d~~------g~~~--~~~a~~~l~~~G~~v  288 (288)
                        +.+.....+++|+||-.+      ..+.  ++...+.|+|||.++
T Consensus       186 --a~~~~~~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lv  230 (296)
T PLN03075        186 --VMDVTESLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLM  230 (296)
T ss_pred             --hhhcccccCCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEE
Confidence              111222122599998875      2222  378889999999874

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=94.80  E-value=0.24  Score=38.66  Aligned_cols=75  Identities=17%  Similarity=0.158  Sum_probs=46.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHHHHHHhcCCCCccE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      .++++++|+|+ |.+|...++.+...| .+++++.    .+.++.+ ..++++...+ .....   ...+...   ++|+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~----r~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~---~~Dv   84 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVN----RTLEKAKALAERFGELGI-AIAYL---DLEELLA---EADL   84 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEc----CCHHHHHHHHHHHhhccc-ceeec---chhhccc---cCCE
Confidence            45689999999 999999999888886 5666665    3555544 3455553210 00000   1111111   4999


Q ss_pred             EEECCCccc
Q 023007          265 GFNCVGGNS  273 (288)
Q Consensus       265 v~d~~g~~~  273 (288)
                      |+.|++...
T Consensus        85 vi~~~~~~~   93 (155)
T cd01065          85 IINTTPVGM   93 (155)
T ss_pred             EEeCcCCCC
Confidence            999987644

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=94.80  E-value=0.15  Score=42.59  Aligned_cols=80  Identities=24%  Similarity=0.247  Sum_probs=45.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-HHHHHHHHhCCCC-EEE--eCCcc-cHHHH-HHHhcCCCCccEE
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLKGLGAD-EVF--TESQL-EVKNV-KGLLANLPEPALG  265 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~~~g~~-~v~--~~~~~-~~~~i-~~~~~~~g~~D~v  265 (288)
                      ++|+|++|.+|...++.+...|++++++.+..... ++..+.+++.+.. .++  |-.+. .++.+ .......+++|.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999988999998887532100 1112223344432 122  22111 12221 1111222359999


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      |.+.|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            999885

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=94.75  E-value=0.29  Score=41.39  Aligned_cols=35  Identities=26%  Similarity=0.386  Sum_probs=30.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+++++|+|+++++|.+.+..+...|++++++.+.
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~   38 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARR   38 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCC
Confidence            56899999999999999888888999998888754

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=94.73  E-value=0.2  Score=43.75  Aligned_cols=203  Identities=16%  Similarity=0.082  Sum_probs=106.2

Q ss_pred             CCCeEEEEEeEEecChHHHHHH-h-CCCCCCCCCCcccc-cceEEEEEEe-cCCCCCCCCCCEEEecCCC--Ccccce--
Q 023007           74 KENDVCVKMLAAPINPSDINRI-E-GVYPVRPKVPAVGG-YEGVGEVYSV-GSAVTRLAPGDWVIPSPPS--SGTWQS--  145 (288)
Q Consensus        74 ~~~evlI~v~~~~i~~~D~~~~-~-g~~~~~~~~p~~~G-~e~~G~V~~~-G~~~~~~~~Gd~V~~~~~~--~G~~a~--  145 (288)
                      ..++|+|+.-+..-+..|-..+ . |.. ...+-...++ .|.+-.|.+- .++..-|+.|+..+.+.+-  ...+.+  
T Consensus        29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~-Iv~ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~~l  107 (371)
T COG0686          29 HGHEVLVETGAGAGSGFDDDDYEAAGAK-IVATAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTEAL  107 (371)
T ss_pred             CCcEEEEecCCcCCCCCChHHHHHcCCE-EecCHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHHHH
Confidence            4568999988776654432222 2 221 1001112233 4444444332 1223448999988877542  111111  


Q ss_pred             ---EEEeeCCcEEEcCC-CC----ChhhhcccccchHHHHHHHHhhcC----------CCCCCeEEEeCCCChHHHHHHH
Q 023007          146 ---YVVKDQSVWHKVSK-DS----PMEYAATIIVNPLTALRMLEDFTT----------LNSGDSIVQNGATSIVGQCIIQ  207 (288)
Q Consensus       146 ---~~~~~~~~l~~ip~-~~----~~~~aa~l~~~~~ta~~~l~~~~~----------~~~g~~vlI~g~~g~vG~~a~~  207 (288)
                         -+..-+.-.+..|+ ++    ++.+.|.-......|++..+..+.          +.+ .+|.|+|+ |.+|.-++.
T Consensus       108 ~~~gvtaIayETV~~~~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~~-~kv~iiGG-GvvgtnaAk  185 (371)
T COG0686         108 LKSGVTAIAYETVQLPDGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVLP-AKVVVLGG-GVVGTNAAK  185 (371)
T ss_pred             HHcCcceEEEEEEEcCCCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCCC-ccEEEECC-ccccchHHH
Confidence               00001111233333 21    223332222123334543322221          233 47888899 999999999


Q ss_pred             HHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC---Cc--c-cH-HHHHh
Q 023007          208 IARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGFNCV---GG--N-SA-SKVLK  279 (288)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~---g~--~-~~-~~a~~  279 (288)
                      +|.-+|++|++..    .+.+|+..+.. ++.+ +.... .....+.+...   +.|++|..+   |.  + .. +.-++
T Consensus       186 iA~glgA~Vtild----~n~~rl~~ldd~f~~r-v~~~~-st~~~iee~v~---~aDlvIgaVLIpgakaPkLvt~e~vk  256 (371)
T COG0686         186 IAIGLGADVTILD----LNIDRLRQLDDLFGGR-VHTLY-STPSNIEEAVK---KADLVIGAVLIPGAKAPKLVTREMVK  256 (371)
T ss_pred             HHhccCCeeEEEe----cCHHHHhhhhHhhCce-eEEEE-cCHHHHHHHhh---hccEEEEEEEecCCCCceehhHHHHH
Confidence            9999999999998    67888877764 3433 22111 11234444444   388888864   22  2 22 66688


Q ss_pred             hccCCCeeC
Q 023007          280 FLRFREEQW  288 (288)
Q Consensus       280 ~l~~~G~~v  288 (288)
                      .|+||+.+|
T Consensus       257 ~MkpGsViv  265 (371)
T COG0686         257 QMKPGSVIV  265 (371)
T ss_pred             hcCCCcEEE
Confidence            899988764

>PLN02476 O-methyltransferase

Probab=94.73  E-value=0.21  Score=43.39  Aligned_cols=103  Identities=10%  Similarity=0.054  Sum_probs=62.4

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCccc-HHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLE-VKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~-~~~i  252 (288)
                      +..+.+..+.++||=+|.  .+|..++.+++.++  .+++.+.    .+++..+.+    ++.|..+-+.-...+ .+.+
T Consensus       110 L~~L~~~~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE----~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L  183 (278)
T PLN02476        110 LAMLVQILGAERCIEVGV--YTGYSSLAVALVLPESGCLVACE----RDSNSLEVAKRYYELAGVSHKVNVKHGLAAESL  183 (278)
T ss_pred             HHHHHHhcCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence            444566777899998887  56777777777663  4666665    456655544    567765333222222 2344


Q ss_pred             HHHh-cC-CCCccEEEECCCc----ccHHHHHhhccCCCeeC
Q 023007          253 KGLL-AN-LPEPALGFNCVGG----NSASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~-~~-~g~~D~v~d~~g~----~~~~~a~~~l~~~G~~v  288 (288)
                      .++. ++ .+.||.||--...    ..++.++++|++||.+|
T Consensus       184 ~~l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV  225 (278)
T PLN02476        184 KSMIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIV  225 (278)
T ss_pred             HHHHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            4432 11 2359986654433    22388899999999875

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.70  E-value=0.13  Score=43.03  Aligned_cols=95  Identities=17%  Similarity=0.099  Sum_probs=57.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE------e---CCc-c-cHHHHH
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF------T---ESQ-L-EVKNVK  253 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~------~---~~~-~-~~~~i~  253 (288)
                      ..++.+||+.|+  +.|.-++.+|. .|.+|+++.    .++...+.+ ++.+.....      .   ... . ....+.
T Consensus        32 ~~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD----~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~  104 (213)
T TIGR03840        32 LPAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVE----LSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFF  104 (213)
T ss_pred             CCCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEe----CCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCC
Confidence            357789999998  66788888875 599999998    578777764 333321100      0   000 0 011111


Q ss_pred             HHhc-CCCCccEEEECCCc---------ccHHHHHhhccCCCee
Q 023007          254 GLLA-NLPEPALGFNCVGG---------NSASKVLKFLRFREEQ  287 (288)
Q Consensus       254 ~~~~-~~g~~D~v~d~~g~---------~~~~~a~~~l~~~G~~  287 (288)
                      ++.. ..+.+|.|+|+..-         ..++...++|+|+|++
T Consensus       105 ~~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~  148 (213)
T TIGR03840       105 ALTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQ  148 (213)
T ss_pred             CCCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeE
Confidence            2211 11248999997641         2236778999999974

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.63  E-value=0.29  Score=37.86  Aligned_cols=32  Identities=19%  Similarity=0.208  Sum_probs=27.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      +|+|.|+ |++|...++.+.+.|...+.++|.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            4899999 9999999999999999777777654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=94.61  E-value=0.13  Score=44.48  Aligned_cols=31  Identities=19%  Similarity=0.321  Sum_probs=28.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +|||+|++|.+|...++.+...|.+|+++.+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r   31 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTS   31 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCC
Confidence            4899999999999999999999999988873

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=94.60  E-value=0.15  Score=45.01  Aligned_cols=61  Identities=23%  Similarity=0.316  Sum_probs=52.8

Q ss_pred             hcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeC
Q 023007          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE  244 (288)
Q Consensus       183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~  244 (288)
                      .+.+.||+++||-..+|.+|...+..+...|+++|++.-.. -+.+|+..++.+|+.-+...
T Consensus        97 ~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~-ms~Ek~~~l~a~Gaeii~tp  157 (362)
T KOG1252|consen   97 KGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEK-MSKEKRILLRALGAEIILTP  157 (362)
T ss_pred             cCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechh-hhHHHHHHHHHcCCEEEecC
Confidence            36799999999999999999999999999999999998544 57788889999999876543

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.60  E-value=0.4  Score=40.17  Aligned_cols=35  Identities=14%  Similarity=0.163  Sum_probs=32.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      -.|.+|+|.|- |.+|+.+++++...|++++.++|.
T Consensus        21 l~g~~vaIqGf-GnVG~~~a~~L~~~G~~vV~vsD~   55 (217)
T cd05211          21 LEGLTVAVQGL-GNVGWGLAKKLAEEGGKVLAVSDP   55 (217)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEEcC
Confidence            46899999999 999999999999999999999874

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.58  E-value=0.11  Score=40.44  Aligned_cols=83  Identities=17%  Similarity=0.078  Sum_probs=52.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc------cHHHHHHHhcCCCCccEE
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL------EVKNVKGLLANLPEPALG  265 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~------~~~~i~~~~~~~g~~D~v  265 (288)
                      |+|.|+ |++|.+.+..++..|.+|..+.    ..+ +.+.+++.|........+.      ..... ....+  .+|++
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~----r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~D~v   71 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVS----RSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-SADAG--PYDLV   71 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEE----SHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-GHHHS--TESEE
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEE----ccc-cHHhhhheeEEEEecccceecccccccCcc-hhccC--CCcEE
Confidence            689999 9999988888877999999998    344 6666766554322111000      00000 11122  49999


Q ss_pred             EECCCcccHHHHHhhccC
Q 023007          266 FNCVGGNSASKVLKFLRF  283 (288)
Q Consensus       266 ~d~~g~~~~~~a~~~l~~  283 (288)
                      |-|+-......+++.+++
T Consensus        72 iv~vKa~~~~~~l~~l~~   89 (151)
T PF02558_consen   72 IVAVKAYQLEQALQSLKP   89 (151)
T ss_dssp             EE-SSGGGHHHHHHHHCT
T ss_pred             EEEecccchHHHHHHHhh
Confidence            999988777666665544

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.58  E-value=0.22  Score=39.86  Aligned_cols=80  Identities=15%  Similarity=0.081  Sum_probs=53.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeC--CcccHHHHHHHhcCCCCccEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE--SQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~--~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      .|..|+++|+.-++|....+-+...|++|+++.    ++++.+..+-++...++.--  +-...+.+.++...-+.+|..
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAva----R~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL   81 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVA----RNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGL   81 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEe----cCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence            578899999988899999999999999999999    56777766644444433211  111234444443332336777


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      +|+.|-
T Consensus        82 VNNAgv   87 (245)
T KOG1207|consen   82 VNNAGV   87 (245)
T ss_pred             hccchh
Confidence            777663

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.56  E-value=0.31  Score=42.59  Aligned_cols=41  Identities=15%  Similarity=0.184  Sum_probs=32.1

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      +....-.-.|++|+|.|.+|.+|...+.++...|++|+++-
T Consensus       150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~  190 (283)
T PRK14192        150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICH  190 (283)
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            33333346789999999955699999999999999776665

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=94.54  E-value=0.24  Score=42.04  Aligned_cols=103  Identities=19%  Similarity=0.167  Sum_probs=60.9

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCccc-HHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLE-VKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~-~~~i  252 (288)
                      +....+..+.++||=.|.  +.|..++.+++.+  +.+++.+.    .+++..+.+    ++.|.+.-+.....+ .+.+
T Consensus        60 L~~l~~~~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD----~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L  133 (234)
T PLN02781         60 LSMLVKIMNAKNTLEIGV--FTGYSLLTTALALPEDGRITAID----IDKEAYEVGLEFIKKAGVDHKINFIQSDALSAL  133 (234)
T ss_pred             HHHHHHHhCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHH
Confidence            344566777889998887  4566666666665  35777776    456665554    456654322222222 2334


Q ss_pred             HHHhcC--CCCccEEEECCCc----ccHHHHHhhccCCCeeC
Q 023007          253 KGLLAN--LPEPALGFNCVGG----NSASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~--~g~~D~v~d~~g~----~~~~~a~~~l~~~G~~v  288 (288)
                      .++...  .+.||+||--..-    ..+..+++++++||.++
T Consensus       134 ~~l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii  175 (234)
T PLN02781        134 DQLLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIA  175 (234)
T ss_pred             HHHHhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEE
Confidence            444322  2259988754422    23378899999999874

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.53  E-value=0.29  Score=42.52  Aligned_cols=48  Identities=10%  Similarity=0.201  Sum_probs=34.7

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHH-HhCC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKL-KGLG  237 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~-~~~g  237 (288)
                      ....+++++|+|+ |+.+.+++..+...|++ ++++.    ++.++.+.+ +.++
T Consensus       118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~n----R~~~~a~~la~~~~  167 (272)
T PRK12550        118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVA----RNEKTGKALAELYG  167 (272)
T ss_pred             CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHhC
Confidence            3445679999999 99999999999999985 66666    455555544 3443

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.52  E-value=0.2  Score=47.12  Aligned_cols=77  Identities=16%  Similarity=0.110  Sum_probs=51.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      ..+++|+|+|+ |.+|+.++.+++..|++|+++...+. ......+.+++.|.....+....       .  .. .+|+|
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------~--~~-~~D~V   82 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------L--PE-DTDLV   82 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------c--cC-CCCEE
Confidence            35689999999 99999999999999999888763211 01122345667786554433221       1  11 38999


Q ss_pred             EECCCcccH
Q 023007          266 FNCVGGNSA  274 (288)
Q Consensus       266 ~d~~g~~~~  274 (288)
                      |-+.|-+..
T Consensus        83 v~s~Gi~~~   91 (480)
T PRK01438         83 VTSPGWRPD   91 (480)
T ss_pred             EECCCcCCC
Confidence            988886443

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=94.50  E-value=0.036  Score=48.02  Aligned_cols=31  Identities=23%  Similarity=0.392  Sum_probs=28.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      |||+|++|.+|...++.+...|.+|+++.+.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   31 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRS   31 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCC
Confidence            6899999999999999988899999999964

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK00536 speE spermidine synthase; Provisional

Probab=94.50  E-value=0.16  Score=43.81  Aligned_cols=90  Identities=9%  Similarity=-0.037  Sum_probs=55.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCC-CEEE-eCCcccHHHHHHHhcCCCCccE-E
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGA-DEVF-TESQLEVKNVKGLLANLPEPAL-G  265 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~-~~v~-~~~~~~~~~i~~~~~~~g~~D~-v  265 (288)
                      ++|||+|+  +=|.++-+++|+.. +|..+.    -+++-.+.+++ +.. ...+ |.+-.....+.+...+  ++|+ +
T Consensus        74 k~VLIiGG--GDGg~~REvLkh~~-~v~mVe----ID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~--~fDVII  144 (262)
T PRK00536         74 KEVLIVDG--FDLELAHQLFKYDT-HVDFVQ----ADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIK--KYDLII  144 (262)
T ss_pred             CeEEEEcC--CchHHHHHHHCcCC-eeEEEE----CCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCC--cCCEEE
Confidence            89999987  44677889999864 666665    45666666665 221 0011 1121111223332223  5997 5


Q ss_pred             EECCCcccH-HHHHhhccCCCeeC
Q 023007          266 FNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       266 ~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +|+.-.+.+ ..+.++|+++|.+|
T Consensus       145 vDs~~~~~fy~~~~~~L~~~Gi~v  168 (262)
T PRK00536        145 CLQEPDIHKIDGLKRMLKEDGVFI  168 (262)
T ss_pred             EcCCCChHHHHHHHHhcCCCcEEE
Confidence            665655555 88899999999875

>PRK07578 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.17  Score=41.38  Aligned_cols=30  Identities=23%  Similarity=0.356  Sum_probs=25.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +++|+|+++++|...+..+... .+|+.+.+
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r   31 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGR   31 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEec
Confidence            6899999999999877777666 88888874

>PRK07574 formate dehydrogenase; Provisional

Probab=94.46  E-value=0.19  Score=45.85  Aligned_cols=33  Identities=15%  Similarity=0.176  Sum_probs=30.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++|.|+|. |.+|...++.++.+|.+|+...+
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr  223 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDR  223 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECC
Confidence            5689999999 99999999999999999998874

>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Probab=94.44  E-value=0.53  Score=42.64  Aligned_cols=92  Identities=17%  Similarity=0.236  Sum_probs=59.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHH-HHHHHhCCCCEEEeCCcccHHHHHH------------
Q 023007          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKNVKG------------  254 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~i~~------------  254 (288)
                      ++|.|+|+||.+|..++.+++..  .++|.+.+..  ++-+. .+.+++|.+..+.-.++.....++.            
T Consensus         2 k~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~--~n~~~L~~q~~~f~p~~v~i~d~~~~~~l~~~l~~~~~~~~v~   79 (389)
T TIGR00243         2 KQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAG--KNVALMVEQILEFRPKFVAIDDEASLKDLKTMLQQQGSRTEVL   79 (389)
T ss_pred             ceEEEEecChHHHHHHHHHHHhCccccEEEEEEcC--CCHHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhhcCCCCcEEE
Confidence            57999999999999999998875  3788888754  33333 3566789988776654432222222            


Q ss_pred             --------HhcCCCCccEEEECCCccc-HHHHHhhccCC
Q 023007          255 --------LLANLPEPALGFNCVGGNS-ASKVLKFLRFR  284 (288)
Q Consensus       255 --------~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~  284 (288)
                              +.... .+|+|++..-|-. +...+..++.|
T Consensus        80 ~G~~~l~~l~~~~-~~D~vv~AivG~aGL~pt~~Ai~~g  117 (389)
T TIGR00243        80 VGEEGICEMAALE-DVDQVMNAIVGAAGLLPTLAAIRAG  117 (389)
T ss_pred             ECHHHHHHHHcCC-CCCEEEEhhhcHhhHHHHHHHHHCC
Confidence                    22221 3899999875533 35555555544

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.

>PRK07023 short chain dehydrogenase; Provisional

Probab=94.44  E-value=0.22  Score=42.01  Aligned_cols=32  Identities=16%  Similarity=0.320  Sum_probs=28.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +++|+|++|++|...++.+...|++++++.+.
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~   34 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARS   34 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecC
Confidence            69999999999999998888889999998753

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=94.43  E-value=0.22  Score=43.65  Aligned_cols=84  Identities=17%  Similarity=0.060  Sum_probs=53.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE---EEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE---VFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +|+|+|+ |.+|.+.+..+...|.+|+.+.    .++++.+.+++.|...   -............+.   . .+|+||-
T Consensus         2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~----r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~-~~d~vil   72 (304)
T PRK06522          2 KIAILGA-GAIGGLFGAALAQAGHDVTLVA----RRGAHLDALNENGLRLEDGEITVPVLAADDPAEL---G-PQDLVIL   72 (304)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEE----CChHHHHHHHHcCCcccCCceeecccCCCChhHc---C-CCCEEEE
Confidence            5899999 9999988888888899999988    3466666666555421   000000000111111   1 4899999


Q ss_pred             CCCcccHHHHHhhccC
Q 023007          268 CVGGNSASKVLKFLRF  283 (288)
Q Consensus       268 ~~g~~~~~~a~~~l~~  283 (288)
                      |+.......+++.+++
T Consensus        73 a~k~~~~~~~~~~l~~   88 (304)
T PRK06522         73 AVKAYQLPAALPSLAP   88 (304)
T ss_pred             ecccccHHHHHHHHhh
Confidence            9987776666655543

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.40  E-value=0.3  Score=42.86  Aligned_cols=54  Identities=22%  Similarity=0.231  Sum_probs=41.8

Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+|+.....+..+....---.|++|.|+|.++.+|.-.+.++...|++|+++-+
T Consensus       138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~  191 (301)
T PRK14194        138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHS  191 (301)
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECC
Confidence            455555555555655444467999999999889999999999999999998853

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=94.37  E-value=0.44  Score=43.36  Aligned_cols=35  Identities=17%  Similarity=0.241  Sum_probs=32.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      -+|.+|.|.|- |.+|+.+++.+...|++++++.+.
T Consensus       205 l~G~rVaVQG~-GNVg~~aa~~l~~~GAkvva~sds  239 (411)
T COG0334         205 LEGARVAVQGF-GNVGQYAAEKLHELGAKVVAVSDS  239 (411)
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHHcCCEEEEEEcC
Confidence            48899999999 999999999999999999999864

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.36  E-value=0.38  Score=41.89  Aligned_cols=53  Identities=21%  Similarity=0.224  Sum_probs=40.4

Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .+|+.....+..+....---.|++|+|.|.++.+|.-.+.++...|++|+.+-
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~h  189 (285)
T PRK14189        137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICH  189 (285)
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEec
Confidence            44544444555555544345899999999988899999999999999998875

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=94.35  E-value=0.19  Score=49.38  Aligned_cols=36  Identities=6%  Similarity=0.092  Sum_probs=31.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIR  221 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~  221 (288)
                      .+++.+|||+|++|-+|...++.+... |.+|+++.+
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r  348 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDI  348 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeC
Confidence            466789999999999999999888765 799999985

>PRK08317 hypothetical protein; Provisional

Probab=94.35  E-value=0.17  Score=42.44  Aligned_cols=96  Identities=15%  Similarity=0.126  Sum_probs=59.4

Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHhC----CCC-EEEeCCcccHHHHH
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL----GAD-EVFTESQLEVKNVK  253 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~i~  253 (288)
                      .....+.++++||-.|+ |. |..+..+++..+  .+++++.    .+++..+.+++.    +.. .+...+..   .. 
T Consensus        12 ~~~~~~~~~~~vLdiG~-G~-G~~~~~~a~~~~~~~~v~~~d----~~~~~~~~a~~~~~~~~~~~~~~~~d~~---~~-   81 (241)
T PRK08317         12 FELLAVQPGDRVLDVGC-GP-GNDARELARRVGPEGRVVGID----RSEAMLALAKERAAGLGPNVEFVRGDAD---GL-   81 (241)
T ss_pred             HHHcCCCCCCEEEEeCC-CC-CHHHHHHHHhcCCCcEEEEEe----CCHHHHHHHHHHhhCCCCceEEEecccc---cC-
Confidence            34567889999999999 44 888889988873  5777776    577777766543    111 11111110   10 


Q ss_pred             HHhcCCCCccEEEECC-----Cc--ccHHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCV-----GG--NSASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~-----g~--~~~~~a~~~l~~~G~~v  288 (288)
                      .+.++  .+|+|+...     .+  ..+....++|+++|.++
T Consensus        82 ~~~~~--~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~  121 (241)
T PRK08317         82 PFPDG--SFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVV  121 (241)
T ss_pred             CCCCC--CceEEEEechhhccCCHHHHHHHHHHHhcCCcEEE
Confidence            11122  489877642     22  12378889999999874

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.34  E-value=0.37  Score=42.30  Aligned_cols=53  Identities=19%  Similarity=0.180  Sum_probs=40.3

Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .+|+.....+..+....---.|++|+|+|-++.+|.-.+.++...|+.|+++-
T Consensus       137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~  189 (296)
T PRK14188        137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH  189 (296)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence            45555445555555543346799999999889999999999999999998883

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.32  E-value=0.042  Score=40.22  Aligned_cols=81  Identities=15%  Similarity=0.103  Sum_probs=48.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++|||.|+ |.+|..-++.+...|++++++..    ..   +..+  +.-.... +.  +   .+...   ++|+||-
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~----~~---~~~~--~~i~~~~-~~--~---~~~l~---~~~lV~~   66 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISP----EI---EFSE--GLIQLIR-RE--F---EEDLD---GADLVFA   66 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEES----SE---HHHH--TSCEEEE-SS------GGGCT---TESEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECC----ch---hhhh--hHHHHHh-hh--H---HHHHh---hheEEEe
Confidence            5689999999 99999999999999999999983    22   2222  1111111 11  1   11112   3999999


Q ss_pred             CCCcccHH-HHHhhccCCCee
Q 023007          268 CVGGNSAS-KVLKFLRFREEQ  287 (288)
Q Consensus       268 ~~g~~~~~-~a~~~l~~~G~~  287 (288)
                      +++++..+ ...+..+..|.+
T Consensus        67 at~d~~~n~~i~~~a~~~~i~   87 (103)
T PF13241_consen   67 ATDDPELNEAIYADARARGIL   87 (103)
T ss_dssp             -SS-HHHHHHHHHHHHHTTSE
T ss_pred             cCCCHHHHHHHHHHHhhCCEE
Confidence            99988874 334444444443

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.32  E-value=0.33  Score=41.58  Aligned_cols=93  Identities=16%  Similarity=0.068  Sum_probs=55.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCCCEEEeCCcccHHHHHHHhcCCCCc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      .++.+||=.|+  +.|..+..+++. |.+|+++.    .+++..+.+++    .|...-+.....+...+.....+  .+
T Consensus        43 ~~~~~vLDiGc--G~G~~a~~la~~-g~~v~~vD----~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~--~f  113 (255)
T PRK11036         43 PRPLRVLDAGG--GEGQTAIKLAEL-GHQVILCD----LSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLET--PV  113 (255)
T ss_pred             CCCCEEEEeCC--CchHHHHHHHHc-CCEEEEEE----CCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCC--CC
Confidence            45678887777  567777888775 88998886    57777776653    33321111111112233222233  49


Q ss_pred             cEEEECCC-----cc--cHHHHHhhccCCCeeC
Q 023007          263 ALGFNCVG-----GN--SASKVLKFLRFREEQW  288 (288)
Q Consensus       263 D~v~d~~g-----~~--~~~~a~~~l~~~G~~v  288 (288)
                      |+|+....     .+  .+..+.+.|+|+|+++
T Consensus       114 D~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~  146 (255)
T PRK11036        114 DLILFHAVLEWVADPKSVLQTLWSVLRPGGALS  146 (255)
T ss_pred             CEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEE
Confidence            99885432     21  2377889999999973

>PRK14030 glutamate dehydrogenase; Provisional

Probab=94.30  E-value=0.83  Score=42.37  Aligned_cols=33  Identities=18%  Similarity=0.175  Sum_probs=30.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      -.|.+|+|.|- |.+|+.+++.+...|++|+++.
T Consensus       226 l~g~~vaIQGf-GnVG~~aA~~L~e~GakvVavS  258 (445)
T PRK14030        226 IKGKTVAISGF-GNVAWGAATKATELGAKVVTIS  258 (445)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            46899999998 9999999999999999999964

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.29  E-value=0.39  Score=40.52  Aligned_cols=34  Identities=15%  Similarity=0.289  Sum_probs=29.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      ..+|+|.|+ |++|..++..+.+.|...+.++|.+
T Consensus        21 ~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          21 NARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            378999999 9999999999999999877777544

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08223 hypothetical protein; Validated

Probab=94.27  E-value=0.2  Score=43.64  Aligned_cols=35  Identities=17%  Similarity=0.144  Sum_probs=30.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA  224 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~  224 (288)
                      ..+|+|.|+ |++|..+++.+.+.|...+.++|.+.
T Consensus        27 ~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         27 NSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            378999999 99999999999999998888887654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=94.25  E-value=0.087  Score=46.07  Aligned_cols=30  Identities=23%  Similarity=0.458  Sum_probs=27.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      +|||+|++|.+|.+....++..|.+++.+.
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~   31 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATS   31 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeC
Confidence            689999999999999999999898988885

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN00016 RNA-binding protein; Provisional

Probab=94.19  E-value=0.24  Score=45.09  Aligned_cols=88  Identities=14%  Similarity=0.215  Sum_probs=52.5

Q ss_pred             CCeEEEe----CCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHH--------HHHHHhCCCCEEEeCCcccHHHHHHHh
Q 023007          189 GDSIVQN----GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA--------KEKLKGLGADEVFTESQLEVKNVKGLL  256 (288)
Q Consensus       189 g~~vlI~----g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~--------~~~~~~~g~~~v~~~~~~~~~~i~~~~  256 (288)
                      ..+|||+    |++|.+|...+..+...|.+|+++++.... ..+        ...+...+...+..    +...+....
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~l~~~~v~~v~~----D~~d~~~~~  126 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP-SQKMKKEPFSRFSELSSAGVKTVWG----DPADVKSKV  126 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc-hhhhccCchhhhhHhhhcCceEEEe----cHHHHHhhh
Confidence            3689999    999999999999998899999999864321 111        11122234333321    112233322


Q ss_pred             cCCCCccEEEECCCccc--HHHHHhhcc
Q 023007          257 ANLPEPALGFNCVGGNS--ASKVLKFLR  282 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~~~--~~~a~~~l~  282 (288)
                      ...+ +|+||++.+...  ....++.++
T Consensus       127 ~~~~-~d~Vi~~~~~~~~~~~~ll~aa~  153 (378)
T PLN00016        127 AGAG-FDVVYDNNGKDLDEVEPVADWAK  153 (378)
T ss_pred             ccCC-ccEEEeCCCCCHHHHHHHHHHHH
Confidence            3333 999999987543  244444443

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=94.18  E-value=0.33  Score=42.69  Aligned_cols=89  Identities=10%  Similarity=0.173  Sum_probs=54.9

Q ss_pred             CeEEEeCCCChHHHH-HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          190 DSIVQNGATSIVGQC-IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~-a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      -+|.|+|. |.+|.. +..+.+..+.++..+++.+. ....+...+++|.....+    .++.+.+.. .+.++|+||++
T Consensus         5 lrVAIIGt-G~IGt~hm~~l~~~~~velvAVvdid~-es~gla~A~~~Gi~~~~~----~ie~LL~~~-~~~dIDiVf~A   77 (302)
T PRK08300          5 LKVAIIGS-GNIGTDLMIKILRSEHLEPGAMVGIDP-ESDGLARARRLGVATSAE----GIDGLLAMP-EFDDIDIVFDA   77 (302)
T ss_pred             CeEEEEcC-cHHHHHHHHHHhcCCCcEEEEEEeCCh-hhHHHHHHHHcCCCcccC----CHHHHHhCc-CCCCCCEEEEC
Confidence            47899996 999987 44555555789998887532 112345677788643322    223343311 11249999999


Q ss_pred             CCcccH-HHHHhhccCCC
Q 023007          269 VGGNSA-SKVLKFLRFRE  285 (288)
Q Consensus       269 ~g~~~~-~~a~~~l~~~G  285 (288)
                      ++...- +.+.++++.|-
T Consensus        78 T~a~~H~e~a~~a~eaGk   95 (302)
T PRK08300         78 TSAGAHVRHAAKLREAGI   95 (302)
T ss_pred             CCHHHHHHHHHHHHHcCC
Confidence            998765 55555555543

>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase

Probab=94.17  E-value=0.68  Score=42.85  Aligned_cols=92  Identities=10%  Similarity=0.122  Sum_probs=60.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHH-HHHHHhCCCCEEEeCCcccHH----------------
Q 023007          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVK----------------  250 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~----------------  250 (288)
                      ++|.|+|++|.+|..++++.+..  .++|++....  .+-+. .+.+++|.+..+...++....                
T Consensus        58 KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag--~Ni~lL~~q~~~f~p~~v~v~d~~~~~~l~~~l~~~~~~~~vl  135 (454)
T PLN02696         58 KPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAG--SNVTLLADQVRKFKPKLVAVRNESLVDELKEALADLDDKPEII  135 (454)
T ss_pred             cEEEEecCCcHhhHHHHHHHHhCccccEEEEEECC--CCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhcCCCCCcEEE
Confidence            68999999999999999998875  4677777643  23333 345678888877665443222                


Q ss_pred             ----HHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCC
Q 023007          251 ----NVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFR  284 (288)
Q Consensus       251 ----~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~  284 (288)
                          .+.++.... .+|+|++...|- -+...+..++.|
T Consensus       136 ~G~egl~~la~~~-evDiVV~AIvG~aGL~pTl~AIkaG  173 (454)
T PLN02696        136 PGEEGIVEVARHP-EAVTVVTGIVGCAGLKPTVAAIEAG  173 (454)
T ss_pred             ECHHHHHHHHcCC-CCCEEEEeCccccchHHHHHHHHCC
Confidence                222322222 389999998774 345556666554

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.14  E-value=0.24  Score=40.87  Aligned_cols=34  Identities=29%  Similarity=0.344  Sum_probs=29.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA  224 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~  224 (288)
                      .+|+|.|+ |++|.-.++.+...|...+.++|.+.
T Consensus        22 s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~   55 (197)
T cd01492          22 ARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRT   55 (197)
T ss_pred             CcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCc
Confidence            78999999 88999999999999998888887653

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PLN03139 formate dehydrogenase; Provisional

Probab=94.12  E-value=0.22  Score=45.44  Aligned_cols=32  Identities=16%  Similarity=0.210  Sum_probs=29.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .|++|.|+|. |.+|...++.++.+|.+++...
T Consensus       198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d  229 (386)
T PLN03139        198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHD  229 (386)
T ss_pred             CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEEC
Confidence            5789999998 9999999999999999998865

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=94.10  E-value=0.23  Score=41.53  Aligned_cols=79  Identities=19%  Similarity=0.222  Sum_probs=50.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC---C-CEEEe--CC---cccH-HHHHHHhcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG---A-DEVFT--ES---QLEV-KNVKGLLAN  258 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g---~-~~v~~--~~---~~~~-~~i~~~~~~  258 (288)
                      |+++++.|+.|++|+.....+...|+++.++.+    +.|+.+...+|.   . ..++.  ++   ..+. +..++....
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~----~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDD----SEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehh----hhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            899999999999999988888889999999884    455544443332   2 22221  11   1111 222333333


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|.+|+.||..|-
T Consensus        81 fg~iDIlINgAGi   93 (261)
T KOG4169|consen   81 FGTIDILINGAGI   93 (261)
T ss_pred             hCceEEEEccccc
Confidence            4469999998874

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=94.09  E-value=0.49  Score=37.07  Aligned_cols=82  Identities=18%  Similarity=0.213  Sum_probs=45.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHH---HHHHhCCCCE-EEeCCcc---cHHH-HHHHhcCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAK---EKLKGLGADE-VFTESQL---EVKN-VKGLLANLP  260 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~---~~~~~~g~~~-v~~~~~~---~~~~-i~~~~~~~g  260 (288)
                      ++++|+|++|++|...++.+...|. .++.+.+.....++..   +.+++.+... ++..+-.   .++. +.......+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999988888887 5666665432222111   2333344332 2221111   1222 222222233


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      .+|.++.+.|.
T Consensus        81 ~id~li~~ag~   91 (180)
T smart00822       81 PLRGVIHAAGV   91 (180)
T ss_pred             CeeEEEEcccc
Confidence            58999999873

It uses NADPH to reduce the keto group to a hydroxy group.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	288
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		3e-50
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		3e-50
1n9g_A	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		5e-30
1h0k_A	364	Enoyl Thioester Reductase 2 Length = 364		6e-30
1n9g_B	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		2e-29
1gu7_A	364	Enoyl Thioester Reductase From Candida Tropicalis L		2e-29
1gyr_A	364	Mutant Form Of Enoyl Thioester Reductase From Candi		3e-28
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		8e-12
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		4e-10
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		2e-07
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		5e-06
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		1e-04
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		2e-04
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		4e-04
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		4e-04
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		5e-04
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		5e-04

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score =  195 bits (495), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 140/233 (60%)
Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
           +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPSDIN I+G Y + P++P  
Sbjct: 15  RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAV 74
Query: 109 XXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
                           T L PGDWVIP+    GTW++  V  +    +V  D P++ AAT
Sbjct: 75  GGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAAT 134
Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           + VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN++RDR    +
Sbjct: 135 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK 194
Query: 229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
             ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L+ L
Sbjct: 195 LSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQL 247

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score =  195 bits (495), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 140/233 (60%)
Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
           +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPSDIN I+G Y + P++P  
Sbjct: 28  RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAV 87
Query: 109 XXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
                           T L PGDWVIP+    GTW++  V  +    +V  D P++ AAT
Sbjct: 88  GGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAAT 147
Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           + VNP TA RML DF  L  GDS++QN + S VGQ +IQIA   G+ +IN++RDR    +
Sbjct: 148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQK 207
Query: 229 AKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
             ++LK LGA+ V TE +L    +K    ++P+P L  NCVGG S++++L+ L
Sbjct: 208 LSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQL 260

>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score =  127 bits (320), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 128/263 (48%), Gaps = 28/263 (10%)
Query: 48  SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           ++AV+Y + G P  V+  +  E+    +  N+V VK L +PINPSDIN+I+GVYP +P  
Sbjct: 26  AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAK 85
Query: 106 PXXXXXXX---------XXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                                       + L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 86  TTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 145
Query: 157 V-------SKDSP----MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +       +   P    +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 146 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 205
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-----KGLLANL 259
             QI +    +SI++IRDR   DE    LK LGA +V TE Q   K       + +  + 
Sbjct: 206 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSG 265
Query: 260 PEPALGFNCVGGNSASKVLKFLR 282
            E  L  NCVGG S++ + + L 
Sbjct: 266 GEAKLALNCVGGKSSTGIARKLN 288

>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2 Length = 364

Iteration: 1
 Score =  127 bits (319), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 128/263 (48%), Gaps = 28/263 (10%)
Query: 48  SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           ++AV+Y + G P  V+  +  E+    +  N+V VK L +PINPSDIN+I+GVYP +P  
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAK 63
Query: 106 PXXXXXXX---------XXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                                       + L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 64  TTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 157 V-------SKDSP----MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +       +   P    +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-----KGLLANL 259
             QI +    +SI++IRDR   DE    LK LGA +V TE Q   K       + +  + 
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTIKEWIKQSG 243
Query: 260 PEPALGFNCVGGNSASKVLKFLR 282
            E  L  NCVGG S++ + + L 
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLN 266

>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 128/263 (48%), Gaps = 28/263 (10%)
Query: 48  SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           ++AV+Y + G P  V+  +  E+    +  N+V VK L +P+NPSDIN+I+GVYP +P  
Sbjct: 26  AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 85
Query: 106 PXXXXXXX---------XXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                                       + L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 86  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 145
Query: 157 V-------SKDSP----MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +       +   P    +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 146 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 205
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-----KGLLANL 259
             QI +    +SI++IRDR   DE    LK LGA +V TE Q   +       + +  + 
Sbjct: 206 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 265
Query: 260 PEPALGFNCVGGNSASKVLKFLR 282
            E  L  NCVGG S++ + + L 
Sbjct: 266 GEAKLALNCVGGKSSTGIARKLN 288

>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 128/263 (48%), Gaps = 28/263 (10%)
Query: 48  SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           ++AV+Y + G P  V+  +  E+    +  N+V VK L +P+NPSDIN+I+GVYP +P  
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63
Query: 106 PXXXXXXX---------XXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                                       + L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 157 V-------SKDSP----MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +       +   P    +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-----KGLLANL 259
             QI +    +SI++IRDR   DE    LK LGA +V TE Q   +       + +  + 
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243
Query: 260 PEPALGFNCVGGNSASKVLKFLR 282
            E  L  NCVGG S++ + + L 
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLN 266

>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 127/263 (48%), Gaps = 28/263 (10%)
Query: 48  SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           ++AV+Y + G P  V+  +  E+    +  N+V VK L +P+NPSDIN+I+GV P +P  
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAK 63
Query: 106 PXXXXXXX---------XXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                                       + L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123
Query: 157 V-------SKDSP----MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +       +   P    +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183
Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV-----KGLLANL 259
             QI +    +SI++IRDR   DE    LK LGA +V TE Q   +       + +  + 
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243
Query: 260 PEPALGFNCVGGNSASKVLKFLR 282
            E  L  NCVGG S++ + + L 
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLN 266

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 9/241 (3%)
Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVR 102
           MS   K + + + G P  V++ +E   +E +K+N+V V+ML  PINPSD+  I G Y  R
Sbjct: 1   MSLHGKLIQFHKFGNPKDVLQ-VEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHR 59
Query: 103 PKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSP 162
             +P                  +R   G  V+P     GTWQ Y VK  + +     DS 
Sbjct: 60  IPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPL-RGEGTWQEY-VKTSADFVVPIPDSI 117
Query: 163 MEY-AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
            ++ AA + +NPLTA     +   L   D ++ N   S +G    Q+++      I + R
Sbjct: 118 DDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTR 177
Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFL 281
           +    ++  E+L  LGA  V   S   +      L N        + +GG   +++   L
Sbjct: 178 N----NKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSL 233
Query: 282 R 282
           R
Sbjct: 234 R 234

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 52  VYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXX 110
           V+E  GP   V+K+     V + K++ V +K+ A  +NP +     G Y  +P +P    
Sbjct: 35  VFEFGGP--EVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPG 92
Query: 111 XXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATII 170
                         +    GD V  S   SG +  Y +      +K+ +    +  A I 
Sbjct: 93  SDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIG 152
Query: 171 VNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK 230
           +   TA R L     + +G+S++ +GA+  VG    QIAR  G+     I   AG++E +
Sbjct: 153 IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK----ILGTAGTEEGQ 208
Query: 231 EKLKGLGADEVFTESQL 247
           + +   GA EVF   ++
Sbjct: 209 KIVLQNGAHEVFNHREV 225

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 91/224 (40%), Gaps = 31/224 (13%)
Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
           +AVV    G P+ V+++ +LP  E    +V V++ AA +N  D+   +GV   +  +P  
Sbjct: 2   RAVVMRARGGPE-VLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60
Query: 109 XXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSS--------------------------GT 142
                              APGD V+ +P  S                          GT
Sbjct: 61  LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120
Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +  YVV  ++      K+   E AA I +  LTA +M+ D   +  GD ++   A S V 
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVS 180
Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ 246
              IQIA+  G   I      AGS++   + K LGADE    + 
Sbjct: 181 VAAIQIAKLFGARVIAT----AGSEDKLRRAKALGADETVNYTH 220

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 20/202 (9%)
Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPK---- 104
           KA+ +++ GPP  V+K+++ P  E ++N   +K+ AA +NP D     G   V  K    
Sbjct: 8   KAIQFDQFGPP-KVLKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66
Query: 105 VPXXXXXXXXXXXXXXXXXXTRLAPGDWV-----IPSPPSSGTWQSYVVKD-QSVWHKVS 158
           +P                    +  GD V      P  P    +  YV     ++  K+ 
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCC--YAEYVCASPDTIIQKLE 124
Query: 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
           K S ++ AA++    LTAL+ L     +  GD ++ +     VG   IQ+A+ +G   I 
Sbjct: 125 KLSFLQ-AASLPTAGLTALQALNQ-AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVIT 182
Query: 219 IIRDRAGSDEAKEKLKGLGADE 240
               R  +      LK LGA++
Sbjct: 183 TASKRNHA-----FLKALGAEQ 199

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 33/240 (13%)
Query: 47  PSKAVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV 105
           P  AV +++ G P+++ +K +  P     E +V +K+ A+ +N +D+ + +G Y   P  
Sbjct: 6   PMLAVHFDKPGGPENLYVKEVAKP--SPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA 63
Query: 106 PXXXXXXXXXXXXXXXXXXTRLAPG--------DWVIPSPPSSGTWQSYVVKDQSVWHKV 157
                                L PG        D  +   P  G  Q YV   + +   +
Sbjct: 64  -------SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQ-YVTVPEGLLMPI 115
Query: 158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
            +   +  AA I    LTA ++L     + +GD ++ +   S VG   IQ+ R  G  +I
Sbjct: 116 PEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AI 173
Query: 218 NIIRDRAGSDEAKEKLKGLGADEVFTE-----SQLEVKNVKGLLANLPEPALGFNCVGGN 272
            ++   AGS +  +  + LGA   F       S+  +K  KG   NL       +C+GG+
Sbjct: 174 PLV--TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLI-----LDCIGGS 226

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 73  VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDW 132
           + + +V + M AA +N  D     G+YP    +                   T LAPGD 
Sbjct: 236 LGDGEVRIAMRAAGVNFRDALIALGMYPGVASL----GSEGAGVVVETGPGVTGLAPGDR 291
Query: 133 VIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSI 192
           V+   P +  +    V D  +  ++        AA++ +  LTA   L D   L  G+S+
Sbjct: 292 VMGMIPKA--FGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESL 349
Query: 193 VQNGATSIVGQCIIQIARHRG 213
           + + A   VG   IQ+ARH G
Sbjct: 350 LVHSAAGGVGMAAIQLARHLG 370

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 21/180 (11%)
Query: 76  NDVCVKMLAAPINP---SDINRIEGVY--PVRPKVPXXXXXXXXXXXXXXXXXXTRLAPG 130
           NDV VK L    +P   S + +IEG Y     P  P                   +   G
Sbjct: 41  NDVVVKNLYLSCDPYMRSRMRKIEGSYVESFAPGSPITGYGVAKVLESGD----PKFQKG 96
Query: 131 DWVIPSPPSSGTWQSY--VVKDQSVWHKVSKDSPMEYAATIIVNP-LTALRMLEDFTTLN 187
           D V         W+ Y  +   Q+++    KD P+ Y   I+  P +TA     +  +  
Sbjct: 97  DLVWGMT----GWEEYSIITPTQTLFKIHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPK 152
Query: 188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQ 246
            G+++  + A+  VGQ + Q A+  G + +      AGS E  + LK   G DE F   +
Sbjct: 153 KGETVFVSAASGAVGQLVGQFAKMLGCYVVG----SAGSKEKVDLLKSKFGFDEAFNYKE 208

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 33/237 (13%)
Query: 50  AVVYEREGPPDSV-IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXX 108
           AV +++ G P+++ +K +  P     E +V +K+ A+ +N +D+ + +G Y   P     
Sbjct: 25  AVHFDKPGGPENLYVKEVAKP--SPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA--- 79
Query: 109 XXXXXXXXXXXXXXXXTRLAPG--------DWVIPSPPSSGTWQSYVVKDQSVWHKVSKD 160
                             L PG        D  +   P  G  Q YV   + +   + + 
Sbjct: 80  ----SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQ-YVTVPEGLLMPIPEG 134
Query: 161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220
             +  AA I    LTA ++L     + +GD ++ +   S VG   IQ+ R  G  +I ++
Sbjct: 135 LTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLV 192
Query: 221 RDRAGSDEAKEKLKGLGADEVFTE-----SQLEVKNVKGLLANLPEPALGFNCVGGN 272
              AGS +  +  + LGA   F       S+  +K  KG   NL       +C+GG+
Sbjct: 193 --TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLI-----LDCIGGS 242

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLE 181
           L  G  V+ SP     W ++ + D     K+  +     P+  A   +  P LTA   L 
Sbjct: 99  LPKGTIVLASPG----WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLL 154
Query: 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           +   +  G++++ N A   VG  + QIA+ +G   +  +    GSDE    L+ LG D V
Sbjct: 155 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAV----GSDEKVAYLQKLGFDVV 210
Query: 242 FTESQLEVKNVKGLLANLPEPA-LGFNC----VGGNSASKVL 278
           F       K V+ L   L + +  G++C    VGG  ++ V+
Sbjct: 211 FN-----YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVI 247

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 127 LAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKD----SPMEYAATIIVNP-LTALRMLE 181
           L  G  V+ SP     W ++ + D     K+  +     P+  A   +  P LTA   L 
Sbjct: 78  LPKGTIVLASPG----WTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLL 133
Query: 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           +   +  G++++ N A   VG  + QIA+ +G   +  +    GSDE    L+ LG D V
Sbjct: 134 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAV----GSDEKVAYLQKLGFDVV 189
Query: 242 FTESQLEVKNVKGLLANLPEPA-LGFNC----VGGNSASKVL 278
           F       K V+ L   L + +  G++C    VGG  ++ V+
Sbjct: 190 FN-----YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVI 226

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	288
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	6e-91
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	9e-82
3gms_A	340	Putative NADPH:quinone reductase; structural genom	9e-58
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	3e-50
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	3e-35
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-31
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	2e-31
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-29
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-29
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-29
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	4e-29
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	5e-29
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	9e-29
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-28
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	8e-28
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-26
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-26
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	3e-26
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	3e-25
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-25
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	8e-25
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	9e-25
4eye_A	342	Probable oxidoreductase; structural genomics, niai	3e-24
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-23
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	7e-23
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-21
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	6e-20
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-19
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	1e-19
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	1e-17
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-17
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-17
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	3e-17
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-16
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-16
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-16
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	2e-15
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	7e-15
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-14
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-14
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	3e-14
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	3e-14
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	5e-14
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-13
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-13
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-13
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	2e-13
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	4e-13
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	4e-13
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-12
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	6e-12
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	6e-12
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	2e-11
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	4e-11
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	2e-10
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	3e-10
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	8e-09
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	4e-08
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	4e-08
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	1e-07
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-07
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	3e-07
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	3e-07
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	5e-07
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	1e-06
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-06
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	7e-05

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  272 bits (699), Expect = 6e-91
 Identities = 113/254 (44%), Positives = 157/254 (61%)

Query: 31  RVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPS 90
            V       +   M    +A+VY   G P  V+++  L    V+ +DV VKMLAAPINPS
Sbjct: 10  GVDLGTENLYFQSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPS 69

Query: 91  DINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKD 150
           DIN I+G Y + P++PAVGG EGV +V +VGS VT L PGDWVIP+    GTW++  V  
Sbjct: 70  DINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFS 129

Query: 151 QSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIAR 210
           +    +V  D P++ AAT+ VNP TA RML DF  L  GDS++QN + S VGQ +IQIA 
Sbjct: 130 EEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA 189

Query: 211 HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG 270
             G+ +IN++RDR    +  ++LK LGA+ V TE +L    +K    ++P+P L  NCVG
Sbjct: 190 ALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVG 249

Query: 271 GNSASKVLKFLRFR 284
           G S++++L+ L   
Sbjct: 250 GKSSTELLRQLARG 263

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  249 bits (639), Expect = 9e-82
 Identities = 97/265 (36%), Positives = 137/265 (51%), Gaps = 28/265 (10%)

Query: 48  SKAVVYEREGPPDSV--IKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP-- 103
           ++AV+Y + G P  V   +  E+    +  N+V VK L +P+NPSDIN+I+GVYP +P  
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 104 -------KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                  +  A  G EG+ EV  VGS V+ L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 157 VSKDS-----------PMEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQC 204
           +   +            +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+ 
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKY 183

Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE----VKNVKGLLANLP 260
             QI +    +SI++IRDR   DE    LK LGA +V TE Q         +K  +    
Sbjct: 184 ASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 243

Query: 261 EPA-LGFNCVGGNSASKVLKFLRFR 284
             A L  NCVGG S++ + + L   
Sbjct: 244 GEAKLALNCVGGKSSTGIARKLNNN 268

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  187 bits (477), Expect = 9e-58
 Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 5/241 (2%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 103
           MS   K + + + G P  V+++       +K+N+V V+ML  PINPSD+  I G Y  R 
Sbjct: 1   MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRI 60

Query: 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPM 163
            +P + GYEGVG V +VG+ V+R   G  V+P     GTWQ YV         +      
Sbjct: 61  PLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRG-EGTWQEYVKTSADFVVPIPDSIDD 119

Query: 164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 223
             AA + +NPLTA     +   L   D ++ N   S +G    Q+++      I +    
Sbjct: 120 FTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAV---- 175

Query: 224 AGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF 283
             +++  E+L  LGA  V   S   +      L N        + +GG   +++   LR 
Sbjct: 176 TRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRP 235

Query: 284 R 284
            
Sbjct: 236 N 236

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  168 bits (427), Expect = 3e-50
 Identities = 61/257 (23%), Positives = 99/257 (38%), Gaps = 21/257 (8%)

Query: 44  MSPPS--KAVVYEREGPPDS-----------VIKMIELPPVEVKENDVCVKMLAAPINPS 90
           M+ PS  KA++   +G   +            ++   +       + V +K+  A INPS
Sbjct: 5   MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPS 64

Query: 91  DINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS-AVTRLAPGDWVI--PSPPSSGTWQSYV 147
           D+  I+G Y          G+EGVG + + G     +   G  V       + G+W  Y 
Sbjct: 65  DVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYA 124

Query: 148 VKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ 207
           V + +    +      E  A +IVNPLTA+ M  D        + V     S + + II 
Sbjct: 125 VAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DIVKQEGEKAFVMTAGASQLCKLIIG 183

Query: 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN 267
           +A+  G   I         DE    LK +GA  V  E   + +     +    +P +  +
Sbjct: 184 LAKEEGFRPIVT----VRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLD 239

Query: 268 CVGGNSASKVLKFLRFR 284
            V G  AS +   +  R
Sbjct: 240 AVTGPLASAIFNAMPKR 256

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  129 bits (326), Expect = 3e-35
 Identities = 52/270 (19%), Positives = 90/270 (33%), Gaps = 37/270 (13%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-- 101
           M    +     +       + +  +       ++V +++ A+P+NPSD+  + G   +  
Sbjct: 2   MHSALQLRSRIKSSGEL-ELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMST 60

Query: 102 --------------------------RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
                                     R       G EG G V   GS+    A     + 
Sbjct: 61  AKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTV- 119

Query: 136 SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN 195
           +      +  Y          + + +     A+  VNPLTAL M+E    L    ++V  
Sbjct: 120 AAIGGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR-LEGHSALVHT 178

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVKG 254
            A S +GQ + QI    GI  +NI        E  + LK  GA  V    S   ++++  
Sbjct: 179 AAASNLGQMLNQICLKDGIKLVNI----VRKQEQADLLKAQGAVHVCNAASPTFMQDLTE 234

Query: 255 LLANLPEPALGFNCVGGNSASKVLKFLRFR 284
            L +     + F+  GG      +      
Sbjct: 235 ALVST-GATIAFDATGGGKLGGQILTCMEA 263

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  118 bits (299), Expect = 1e-31
 Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 6/194 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
             + + + G P+ V++ +E  P +  EN++ V+  A  IN  D     G+YP  P +P+ 
Sbjct: 3   TRIEFHKHGGPE-VLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSG 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E  G V  VGS V  +  GD V+ +  + G + S           +      E AA 
Sbjct: 61  LGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAA 120

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
             +  LT   +L     +   +  + + A   VG    Q A+  G   I       G+ +
Sbjct: 121 SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGT----VGTAQ 176

Query: 229 AKEKLKGLGADEVF 242
             +     GA +V 
Sbjct: 177 KAQSALKAGAWQVI 190

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  118 bits (297), Expect = 2e-31
 Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 6/194 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           K + +   G P+ V++ ++  P       V V+  A  +N  D     G+YP  P +P+ 
Sbjct: 3   KRIQFSTVGGPE-VLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSG 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G EG G V +VG  VTR   GD V       G +    V  ++   K++     E AA 
Sbjct: 61  LGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAA 120

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           +++  LT   +L     +  G+ I+ + A   VG    Q A+  G   I        S E
Sbjct: 121 LMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGT----VSSPE 176

Query: 229 AKEKLKGLGADEVF 242
                K LGA E  
Sbjct: 177 KAAHAKALGAWETI 190

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  114 bits (287), Expect = 1e-29
 Identities = 52/222 (23%), Positives = 76/222 (34%), Gaps = 32/222 (14%)

Query: 41  SALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
              + PP   A+          V      P   +  + V V++ A  INPSD +      
Sbjct: 4   QPFIPPPQQTALTVNDHDEVT-VWNAAPCP--MLPRDQVYVRVEAVAINPSDTSMRGQF- 59

Query: 100 PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVI-------PSPPSSGTWQSYVVKDQS 152
                  A  G +  G V +VGS VT +  GD V        P  P  G +  Y V    
Sbjct: 60  ---ATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGR 116

Query: 153 VWHKVSKDSPMEYAATIIVNPLTALRMLEDF------------TTLNSGDSIVQNGATSI 200
           VW K+ K    E AA +     TA   ++               T +    ++  G ++ 
Sbjct: 117 VWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTA 176

Query: 201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
                +Q+ R  G   I        S    +  K  GA+EVF
Sbjct: 177 TATVTMQMLRLSGYIPIATC-----SPHNFDLAKSRGAEEVF 213

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  114 bits (287), Expect = 1e-29
 Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 7/218 (3%)

Query: 28  GARRVQAQRVRAFSALMSPPS---KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLA 84
            +  V       +   M+      +AV     G P+ +    ++     K++ V +K+ A
Sbjct: 7   HSSGVDLGTENLYFQSMATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHA 66

Query: 85  APINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQ 144
             +NP +     G Y  +P +P   G +  G + +VG   +    GD V  S   SG + 
Sbjct: 67  CGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYA 126

Query: 145 SYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQC 204
            Y +      +K+ +    +  A I +   TA R L     + +G+S++ +GA+  VG  
Sbjct: 127 EYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLA 186

Query: 205 IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
             QIAR  G+  +      AG++E ++ +   GA EVF
Sbjct: 187 ACQIARAYGLKILGT----AGTEEGQKIVLQNGAHEVF 220

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  112 bits (283), Expect = 2e-29
 Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 21/242 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV----RPK 104
           KA+ +++ GPP  V+K+++ P  E ++N + +K+ AA +NP D     G   V    +  
Sbjct: 8   KAIQFDQFGPPK-VLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66

Query: 105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWV---IPSPPSSGTWQSYVVKDQSVWHKVSKDS 161
           +P+  GY+  GEV  +GS V  +  GD V      P     +  YV        +  +  
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKL 126

Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
               AA++    LTAL+ L     +  GD ++ +     VG   IQ+A+ +G   I    
Sbjct: 127 SFLQAASLPTAGLTALQALNQ-AEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITT-- 183

Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA-LGFNCVGGNSASKVLKF 280
               S      LK LGA++     + +          +  P     + VGG+   + +  
Sbjct: 184 ---ASKRNHAFLKALGAEQCINYHEEDFLLA------ISTPVDAVIDLVGGDVGIQSIDC 234

Query: 281 LR 282
           L+
Sbjct: 235 LK 236

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  112 bits (282), Expect = 4e-29
 Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 31/220 (14%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +AVV    G P+ V+++ +LP  E    +V V++ AA +N  D+   +GV   +  +P V
Sbjct: 2   RAVVMRARGGPE-VLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSSGT 142
            G +G G V +VG  V   APGD V+ +P                             GT
Sbjct: 61  LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +  YVV  ++      K+   E AA I +  LTA +M+ D   +  GD ++   A S V 
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVS 180

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
              IQIA+  G   I      AGS++   + K LGADE  
Sbjct: 181 VAAIQIAKLFGARVIAT----AGSEDKLRRAKALGADETV 216

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  112 bits (282), Expect = 5e-29
 Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 13/204 (6%)

Query: 44  MSPPS--KAVVYEREGP--PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
           +   S  + +V  R  P   ++V    + P     + D+ V+     +N SDIN   G Y
Sbjct: 18  LYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRY 77

Query: 100 PVRPKVPAVGGYEGVGEVYSVGSAVT-RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS 158
               K P   G+EG+GEV ++G + + R   G  V    P  G++  Y V   S+   V 
Sbjct: 78  DPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAP--GSFAEYTVVPASIATPV- 134

Query: 159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSIN 218
             S      T++V+  TA   L++   L+ G  ++   A    GQ  +Q+++    H I 
Sbjct: 135 -PSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 193

Query: 219 IIRDRAGSDEAKEKLKGLGADEVF 242
                  SDE    LK LG D   
Sbjct: 194 T----CSSDEKSAFLKSLGCDRPI 213

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  110 bits (278), Expect = 9e-29
 Identities = 37/238 (15%), Positives = 78/238 (32%), Gaps = 24/238 (10%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +             + +  +    +  +D+ V+  A  INP D   I+   P+      V
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKA-NPINWSNGHV 61

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA 166
            G +G G +  VG+ V     G  V    S    G++  + V +      +  +   E A
Sbjct: 62  PGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERA 121

Query: 167 ATIIVNPLTALRMLEDFTTLN--SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
           A +   P   L   + F  +       ++  G  + V   + Q+  + G           
Sbjct: 122 AAL---PCPLLTAWQAFEKIPLTKQREVLIVGFGA-VNNLLTQMLNNAGYVVDL-----V 172

Query: 225 GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR 282
            +  ++      G   ++ E     +    +          F+ V   +A+ ++  L+
Sbjct: 173 SASLSQALAAKRGVRHLYREPSQVTQKYFAI----------FDAVNSQNAAALVPSLK 220

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  110 bits (277), Expect = 3e-28
 Identities = 60/225 (26%), Positives = 87/225 (38%), Gaps = 30/225 (13%)

Query: 40  FSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY 99
           F ++MS   +    E   P    +K+ E P  E  E+D+ V+ LA  +N  D   +E   
Sbjct: 20  FQSMMSKWMQEWSTETVAP--HDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGM 77

Query: 100 PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP---------------------- 137
            +    P V   +  G V +VG +VTR  PGD VI +                       
Sbjct: 78  GLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLG 137

Query: 138 -PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG 196
               G    YVV  +  +    K      A+T+    LTA   L +   L +GD +V  G
Sbjct: 138 GAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG 197

Query: 197 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
            T  V    +QIA+  G   I      + S E  ++   LGAD  
Sbjct: 198 -TGGVALFGLQIAKATGAEVIVT----SSSREKLDRAFALGADHG 237

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  108 bits (273), Expect = 8e-28
 Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 6/191 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +AVV    G  +  +++      E ++ ++ +++ A  +N  D+   +G     PK P V
Sbjct: 5   RAVVLAGFGGLN-KLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLV 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G+E  G V ++G +V     GD V+        W   V       +K+  D     AA 
Sbjct: 64  PGFECSGIVEALGDSVKGYEIGDRVMAFVN-YNAWAEVVCTPVEFVYKIPDDMSFSEAAA 122

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
             +N +TA  ML +   L  G S++ + A   VGQ + Q+       ++        S  
Sbjct: 123 FPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFG----TASTF 178

Query: 229 AKEKLKGLGAD 239
             E +K     
Sbjct: 179 KHEAIKDSVTH 189

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  105 bits (264), Expect = 1e-26
 Identities = 46/198 (23%), Positives = 75/198 (37%), Gaps = 9/198 (4%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY--PVRPKVP 106
            A V  ++G PD      E+         V ++  A  +N  D     G+    V  + P
Sbjct: 3   MAAVIHKKGGPD-NFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPP 61

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA 166
            V G+E    V  VG  VT    G+ V    P  G +    +       KV KD  ++  
Sbjct: 62  IVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDV 121

Query: 167 --ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
             A +++  +TA  +L     +  GD ++ + A   +G  ++  ARH G   I       
Sbjct: 122 HLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGT----V 177

Query: 225 GSDEAKEKLKGLGADEVF 242
            ++E  E  + LG     
Sbjct: 178 STEEKAETARKLGCHHTI 195

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  104 bits (263), Expect = 2e-26
 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 11/205 (5%)

Query: 41  SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP 100
              +    K ++ +  G  D VIK  + P   + E ++ +K     +N  +    +G+YP
Sbjct: 2   KCTIPEQQKVILIDEIGGYD-VIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP 60

Query: 101 VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH---KV 157
              + P V G E  G V + G  VT    GD V     S+    S +     V       
Sbjct: 61  C--EKPYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGT 118

Query: 158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
           S D  ++  A  ++  LTAL    +   +  GD ++   A   VG  + Q+ + +G H+I
Sbjct: 119 S-DEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTI 177

Query: 218 NIIRDRAGSDEAKEKLKGLGADEVF 242
            +    A +DE  +  K  GA+ + 
Sbjct: 178 AV----ASTDEKLKIAKEYGAEYLI 198

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  104 bits (262), Expect = 3e-26
 Identities = 62/258 (24%), Positives = 99/258 (38%), Gaps = 35/258 (13%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPV------ 101
            A V ++ G  + +     +  P+    N+V VK+ AA +NP D+N   G          
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 102 --------RPKVPAVGGYEGVGEVYSVGSAVTRLAPGD--WVIPSPPSSGTWQSYVVKDQ 151
                     + P   G +  G V   G  V    PGD  W    P   GT   +VV   
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSG 142

Query: 152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN----SGDSIVQNGATSIVGQCIIQ 207
           +      K      AA++    LTA   +     LN    +G  ++  GA+  VG   IQ
Sbjct: 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQ 202

Query: 208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQLEVKNVKGLLANLPEPAL 264
           + +    H   +      S +A E ++ LGAD+V    +       +V+  L +L     
Sbjct: 203 VMKAWDAHVTAV-----CSQDASELVRKLGADDVIDYKSG------SVEEQLKSLKPFDF 251

Query: 265 GFNCVGGNSASKVLKFLR 282
             + VGG++ +    FL+
Sbjct: 252 ILDNVGGSTETWAPDFLK 269

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  102 bits (256), Expect = 3e-25
 Identities = 61/223 (27%), Positives = 88/223 (39%), Gaps = 24/223 (10%)

Query: 34  AQRVRAFSALMSPPS-KAVVYEREGPPDS--VIKMIELPPVEVKENDVCVKMLAAPINPS 90
           +  V   +  +   S KAV Y +  P      +  IELP      +D+ V++ A  +NP 
Sbjct: 8   SSGVDLGTENLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPV 67

Query: 91  DINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGD--WVIPSPPSSGTWQSYVV 148
           D        P       V GY+  G V +VG  VT   PGD  +   S    GT   + +
Sbjct: 68  DYKVRRSTPPDGTD-WKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHL 126

Query: 149 KDQS-VWHKVSKDSPMEYAATIIVNPLTAL--------RMLEDFTTLNSGDSIVQNGATS 199
            D+  V  K       E AA     PLT++        R+  +     +  +I+  G   
Sbjct: 127 VDERIVGRKPKTLDWAEAAAL----PLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAG 182

Query: 200 IVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEV 241
            VG   +QIAR R  +  I      A   E +E +K LGA  V
Sbjct: 183 GVGSIAVQIARQRTDLTVI----ATASRPETQEWVKSLGAHHV 221

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  103 bits (258), Expect = 3e-25
 Identities = 44/258 (17%), Positives = 79/258 (30%), Gaps = 53/258 (20%)

Query: 30  RRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINP 89
              +A  V      M     A +  R+  P   I + ++P  E+   +  V ++A+ +N 
Sbjct: 29  ESYRAITVHKDETEM----FAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNY 84

Query: 90  SDINRIEGVY----------------PVRPKVP-AVGGYEGVGEVYSVGSAVTRLAPGDW 132
           + ++                        R  +P  V G +  G V   G  V     GD 
Sbjct: 85  NSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDE 144

Query: 133 VIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYA 166
           V+                              + G      +   +           E A
Sbjct: 145 VVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEA 204

Query: 167 ATIIVNPLTALRMLEDFTT--LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA 224
           A   +   TA R L       +  GD+++  GA+  +G    Q A   G + I +     
Sbjct: 205 AAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICV----V 260

Query: 225 GSDEAKEKLKGLGADEVF 242
            S +  E  + +GA+ + 
Sbjct: 261 SSPQKAEICRAMGAEAII 278

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  100 bits (252), Expect = 8e-25
 Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 25/207 (12%)

Query: 49  KAVVYEREGPPDS--VIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP 106
           KA+ +E+        + K   L   E K +++ VK+ +  +NP D  +        P+V 
Sbjct: 4   KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKAPRVL 63

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVI--PSPPSSGTWQSYVVKDQS-VWHKVSKDSPM 163
              G++ +G V SVG+ VT    GD V    SP  +G+   Y + ++  V     K+   
Sbjct: 64  ---GFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKA-PKNISA 119

Query: 164 EYAATIIVNPLTAL--------RM-LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI 214
           E A ++   PLT +           +      N G +++       VG    QIA+  G+
Sbjct: 120 EQAVSL---PLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL 176

Query: 215 HSINIIRDRAGSDEAKEKLKGLGADEV 241
             I      A  +E  E  K +GAD V
Sbjct: 177 RVITT----ASRNETIEWTKKMGADIV 199

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  100 bits (251), Expect = 9e-25
 Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 14/204 (6%)

Query: 44  MSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV- 101
           ++ P+  A V E    P  V++ +  P  +     V V++ A+  NP D     G  P  
Sbjct: 3   LTTPTMIAAVVEEANGPF-VLRKLARP--QPAPGQVLVQIEASGTNPLDAKIRAGEAPHA 59

Query: 102 RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----SSGTWQSYVVKDQSVWHKV 157
           +  +PA+ G +  G V +VG  V     GD V           GT   +   D  +    
Sbjct: 60  QQPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASK 119

Query: 158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSI 217
                M  A+ + +  +TA   L D   +  G +++  G    VG   IQIA  RG    
Sbjct: 120 PAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVF 179

Query: 218 NIIRDRAGSDEAKEKLKGLGADEV 241
                        E ++ LGA  +
Sbjct: 180 A-----TARGSDLEYVRDLGATPI 198

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 99.2 bits (248), Expect = 3e-24
 Identities = 47/193 (24%), Positives = 74/193 (38%), Gaps = 7/193 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA+  +    P+  +   ++       N V V + AA +   D    +G Y ++ + P V
Sbjct: 23  KAIQAQSLSGPE-GLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFV 81

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E  G V S     + + PGD V+      G +   V    S             A  
Sbjct: 82  PGIETAGVVRSAP-EGSGIKPGDRVMAFNF-IGGYAERVAVAPSNILPTPPQLDDAEAVA 139

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
           +I N  T          L +G++++  GA   +G   IQIA+  G   I +         
Sbjct: 140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAV----VNRTA 195

Query: 229 AKEKLKGLGADEV 241
           A E +K +GAD V
Sbjct: 196 ATEFVKSVGADIV 208

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 96.9 bits (242), Expect = 2e-23
 Identities = 56/201 (27%), Positives = 80/201 (39%), Gaps = 8/201 (3%)

Query: 44  MSPPS--KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV 101
           MS P   + V  +  G PD V+ + + P     E +V V+  A  +N  DI + +G YP 
Sbjct: 23  MSLPQEMRFVDLKSFGGPD-VMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP 81

Query: 102 RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDS 161
                 + G E  GE+  VG  V+  A GD V     + G +  Y +          K  
Sbjct: 82  PKDASPILGLELSGEIVGVGPGVSGYAVGDKVC-GLANGGAYAEYCLLPAGQILPFPKGY 140

Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
               AA +     T    L     L  G+S++ +G TS +G   IQ+AR  G        
Sbjct: 141 DAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYAT-- 198

Query: 222 DRAGSDEAKEKLKGLGADEVF 242
             AGS    E  + LGA    
Sbjct: 199 --AGSTGKCEACERLGAKRGI 217

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 96.4 bits (240), Expect = 7e-23
 Identities = 52/254 (20%), Positives = 85/254 (33%), Gaps = 55/254 (21%)

Query: 33  QAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI 92
            A  +RA  A M       V +++      +++ E+P  E+  ++V V ++A+ IN + +
Sbjct: 26  LALHLRAEDADM----FKGVADKDVR--KSLRLGEVPMPELAPDEVLVAVMASSINYNTV 79

Query: 93  NRIEGVY-----------------PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
                                       +   V G +  G V   G  V R  PGD VI 
Sbjct: 80  WSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIV 139

Query: 136 SPPSS--------------------------GTWQSYVVKDQSVWHKVSKDSPMEYAATI 169
            P                             G    Y V   S           E AA  
Sbjct: 140 HPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVS 199

Query: 170 IVNPLTALRML--EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD 227
            +   TA RML  +    +  GD ++  GA+  +G   IQ  ++ G   + +      S 
Sbjct: 200 PLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAV----VSSA 255

Query: 228 EAKEKLKGLGADEV 241
           + +  ++ LG D V
Sbjct: 256 QKEAAVRALGCDLV 269

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 7/195 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
            AV +++ G P+  + + E+      E +V +K+ A+ +N +D+ + +G Y   P    +
Sbjct: 24  LAVHFDKPGGPE-NLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 82

Query: 109 GGYEGVGEVYSVGSAV-TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAA 167
            G E  G V  +G         GD  + +    G    YV   + +   + +   +  AA
Sbjct: 83  LGLEASGHVAELGPGCQGHWKIGDTAM-ALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAA 141

Query: 168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD 227
            I    LTA ++L     + +GD ++ +   S VG   IQ+ R  G   +      AGS 
Sbjct: 142 AIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVT----AGSQ 197

Query: 228 EAKEKLKGLGADEVF 242
           +  +  + LGA   F
Sbjct: 198 KKLQMAEKLGAAAGF 212

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 87.3 bits (217), Expect = 6e-20
 Identities = 50/227 (22%), Positives = 87/227 (38%), Gaps = 42/227 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-------PV 101
           +AV     G P   ++ I +P  + K   V +K+ AA +  SD++  +G +        +
Sbjct: 2   RAVRLVEIGKP-LSLQEIGVP--KPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 102 RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------- 140
             K+P   G+E  G++  VG  V   + GD V  +P                        
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 141 -----GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN 195
                G +  YV+     +    +      AA +  + +T  R +    +L+   +++  
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRK-ASLDPTKTLLVV 177

Query: 196 GATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
           GA   +G   +QIA+   G   I +       +EA E  K  GAD V
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGV----DVREEAVEAAKRAGADYV 220

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 86.9 bits (216), Expect = 1e-19
 Identities = 51/258 (19%), Positives = 90/258 (34%), Gaps = 48/258 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAV  E     +  I +  +   E   +D+ VK+ A  I  +D + + G +P  P  P  
Sbjct: 25  KAVRLE--SVGN--ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP--PVT 78

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSSGT 142
            G+E  G V   GSAV  +APG  +   P                             G 
Sbjct: 79  LGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGG 138

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGAT 198
           +  YV+  +    ++       + A     PL      + +      + +G ++   G  
Sbjct: 139 FAEYVLVPRKQAFEIPLTLDPVHGA--FCEPLACCLHGVDLSG----IKAGSTVAILGGG 192

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVKGLLA 257
            I G   +Q+AR  G  ++ I+  R      +   + +GA       +   V+ + G + 
Sbjct: 193 VI-GLLTVQLARLAGATTV-ILSTR--QATKRRLAEEVGATATVDPSAGDVVEAIAGPVG 248

Query: 258 NLPEPA-LGFNCVGGNSA 274
            +P    +   C G    
Sbjct: 249 LVPGGVDVVIECAGVAET 266

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 87.5 bits (217), Expect = 1e-19
 Identities = 53/220 (24%), Positives = 84/220 (38%), Gaps = 16/220 (7%)

Query: 25  EWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELP--PVEVKENDVCVKM 82
                R                  +     R G  D  + +++ P     + + +V + M
Sbjct: 188 GAHAPRLAGLGSDDVLPVPDGTGWRLEA-TRPGSLDG-LALVDEPTATAPLGDGEVRIAM 245

Query: 83  LAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGT 142
            AA +N  D     G+YP    +    G EG G V   G  VT LAPGD V+   P    
Sbjct: 246 RAAGVNFRDALIALGMYPGVASL----GSEGAGVVVETGPGVTGLAPGDRVMGMIP--KA 299

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG 202
           +    V D  +  ++        AA++ +  LTA   L D   L  G+S++ + A   VG
Sbjct: 300 FGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVG 359

Query: 203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
              IQ+ARH G      +   A  D+  + +  L  + + 
Sbjct: 360 MAAIQLARHLGAE----VYATASEDK-WQAV-ELSREHLA 393

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score = 80.8 bits (200), Expect = 1e-17
 Identities = 55/255 (21%), Positives = 95/255 (37%), Gaps = 47/255 (18%)

Query: 38  RAFSALMSPPS-KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE 96
           + FS  +     KA        P   I+ ++ P +E    DV V++  A +  +D++ ++
Sbjct: 5   QDFSQSLGVERLKAARLHEYNKP-LRIEDVDYPRLE-GRFDVIVRIAGAGVCHTDLHLVQ 62

Query: 97  GVYP--VRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS-------------- 140
           G++   ++PK+P   G+E VG +  V   V  L  GD VI  P  +              
Sbjct: 63  GMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMH 122

Query: 141 ------------GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--------ALRML 180
                       G +  ++        K+ KD   E      + PL         A++  
Sbjct: 123 CENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVE--MAPLADAGITAYRAVKKA 180

Query: 181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE 240
               TL  G  +   G    +G   +Q+ +     ++ I  D    +E  +  + LGAD 
Sbjct: 181 AR--TLYPGAYVAIVGVGG-LGHIAVQLLKVMTPATV-IALDV--KEEKLKLAERLGADH 234

Query: 241 VFTESQLEVKNVKGL 255
           V    +  VK V  L
Sbjct: 235 VVDARRDPVKQVMEL 249

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 81.1 bits (201), Expect = 1e-17
 Identities = 51/269 (18%), Positives = 93/269 (34%), Gaps = 71/269 (26%)

Query: 43  LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR 102
           +M   + A+V E+   P  V K  E+  +      + V++L+A +  SD++   G  P R
Sbjct: 13  MMGLKAHAMVLEKFNQP-LVYKEFEISDI--PRGSILVEILSAGVCGSDVHMFRGEDP-R 68

Query: 103 PKVPAVGGYEGVGEVYSVGSAVT-----RLAPGDWVIPS--------------------- 136
             +P + G+EG G V  V           L PGD ++ +                     
Sbjct: 69  VPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCP 128

Query: 137 --------------PPSSGTWQSYVV--KDQSVWHKVSKDSPMEYAATI---IVNPLTAL 177
                         P   G + S++V   +  V  KVS+   ++  A           A 
Sbjct: 129 NRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVL-KVSEKDDLDVLAMAMCSGATAYHAF 187

Query: 178 RMLEDFTTLNSGDSIVQNGATSIV------GQCIIQIARHRGIHSINIIRDRAGSDEAKE 231
                       +     G T ++      G   + IAR  G  ++ I+         + 
Sbjct: 188 --------DEYPE--SFAGKTVVIQGAGPLGLFGVVIARSLGAENV-IVIAG---SPNRL 233

Query: 232 KL-KGLGADEVFTESQLEVKNVKGLLANL 259
           KL + +GAD      +  V+  +  + ++
Sbjct: 234 KLAEEIGADLTLNRRETSVEERRKAIMDI 262

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 79.6 bits (197), Expect = 3e-17
 Identities = 56/256 (21%), Positives = 93/256 (36%), Gaps = 45/256 (17%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           K+VV +        +    +P ++  +++V VK+ ++ +  SD+ RI          P  
Sbjct: 2   KSVVND--TDGIVRVAESVIPEIK-HQDEVRVKIASSGLCGSDLPRIFKNGAHYY--PIT 56

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSSGT 142
            G+E  G + +VGS V  L PGD V   P                             G 
Sbjct: 57  LGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGG 116

Query: 143 WQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGDSIVQNGAT 198
           +  Y+V  +     +  D P+E  A   + P+T    A  + +         +++  GA 
Sbjct: 117 FAEYIVVKRKNVFALPTDMPIEDGA--FIEPITVGLHAFHLAQ----GCENKNVIIIGAG 170

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN 258
           +I G   IQ A   G  S+    D   S E     K  GA + F  S++    ++ +L  
Sbjct: 171 TI-GLLAIQCAVALGAKSV-TAIDI--SSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRE 226

Query: 259 LPEPALGFNCVGGNSA 274
           L    L     G    
Sbjct: 227 LRFNQLILETAGVPQT 242

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 79.1 bits (196), Expect = 3e-17
 Identities = 52/208 (25%), Positives = 79/208 (37%), Gaps = 22/208 (10%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V +R G P  ++   +LP  E +E +V +++ A  +N +D     G Y  R   P +
Sbjct: 2   KAWVLKRLGGPLELV---DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E VG V   G     L P           G     V   +     + +    E AA 
Sbjct: 59  PGMEVVGVV--EGRRYAALVPQ----------GGLAERVAVPKGALLPLPEGLSPEEAAA 106

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDE 228
             V+ LTA   L+       G+ ++   A   +G   +Q+AR  G+  +      A   E
Sbjct: 107 FPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAA----ASRPE 161

Query: 229 AKEKLKGLGADEV--FTESQLEVKNVKG 254
                  LGA+E   + E     K   G
Sbjct: 162 KLALPLALGAEEAATYAEVPERAKAWGG 189

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 40/224 (17%), Positives = 81/224 (36%), Gaps = 37/224 (16%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-PVRPKVPA 107
           KA + ++   P   + + ++   E +  +V +++  A +  +D+   +GV      ++P 
Sbjct: 5   KAALLKKFSEP---LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPI 61

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------------G 141
           + G+E  G +  VG  + ++  GD V+                                G
Sbjct: 62  ILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNG 120

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT---ALRMLEDFTTLNSGDSIVQNGAT 198
            +  Y++   S W           AA +     T   A+R    F +  +   ++ NG  
Sbjct: 121 GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIG 180

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
             +    IQI +    +   +   R  S + ++    LGAD V 
Sbjct: 181 G-LAVYTIQILKALMKNITIVGISR--SKKHRDFALELGADYVS 221

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 52/240 (21%), Positives = 77/240 (32%), Gaps = 40/240 (16%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP-KVPA 107
           KAV Y   G    V+  I  P       ++ +K+ AA +  SDI  ++         +P 
Sbjct: 2   KAVQYTEIGSE-PVVVDIPTP--TPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPL 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------------- 140
             G+EGVG V  +G  VT    GD V    P                             
Sbjct: 59  TLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPG 118

Query: 141 ----GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT-LNSGDSIVQN 195
               G+   Y++ D +       D     AA +    LT    +      L  G + V  
Sbjct: 119 LGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVI 178

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL 255
           G    +G   IQI R      + I  D    D+     + +GAD            ++ L
Sbjct: 179 GVGG-LGHVGIQILRAVSAARV-IAVDL--DDDRLALAREVGADAAVKSGAGAADAIREL 234

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 54/227 (23%), Positives = 87/227 (38%), Gaps = 48/227 (21%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG--VYPVRPKVP 106
            A++  +   P    +++E+   +    +V +K+LA  I  +D++  E       R K P
Sbjct: 6   VAIMKTK---PGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPP 62

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSS 140
            + G+E  GEV  +G  V  +  GD+V                               + 
Sbjct: 63  QIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD 122

Query: 141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL-----TALRMLEDFTTLNSGDSIVQN 195
           G +  Y V       K  K  P EYA   +  PL     T L          SG S++  
Sbjct: 123 GVFAEYAVVPAQNIWKNPKSIPPEYAT--LQEPLGNAVDTVLAGPI------SGKSVLIT 174

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
           GA  + G   I +A+  G + + I+ +   SD  +E  K +GAD V 
Sbjct: 175 GAGPL-GLLGIAVAKASGAYPV-IVSEP--SDFRRELAKKVGADYVI 217

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 74.5 bits (184), Expect = 2e-15
 Identities = 50/274 (18%), Positives = 97/274 (35%), Gaps = 56/274 (20%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           K V++          K I +P  + K N++ + +  + +  +D++   G +P+  K+P V
Sbjct: 7   KGVIFYESHGK-LEYKDIPVP--KPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLV 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV---------------------------IPSPPSSG 141
           GG+EG G V  +G  V     GD+                            +      G
Sbjct: 64  GGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDG 123

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--------ALRMLEDFTTLNSGDSIV 193
           ++Q Y   D      + + + +   A     P+         AL+       L +G  + 
Sbjct: 124 SFQQYATADAVQAAHIPQGTDLAQVA-----PILCAGITVYKALKS----ANLMAGHWVA 174

Query: 194 QNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKN 251
            +GA   +G   +Q A+  G   + I     G +  +E  + +G +    FT+ +  V  
Sbjct: 175 ISGAAGGLGSLAVQYAKAMGYRVLGI----DGGEGKEELFRSIGGEVFIDFTKEKDIVGA 230

Query: 252 VKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFR 284
           V           +  N     +A     +++R  
Sbjct: 231 VLKATDGGAHGVI--NVSVSEAAIEASTRYVRAN 262

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score = 72.6 bits (179), Expect = 7e-15
 Identities = 52/234 (22%), Positives = 85/234 (36%), Gaps = 62/234 (26%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V    G P   I  + +P  +     V VK+ A+ +  +D++  +G +PV+P +P +
Sbjct: 4   KAAVVRAFGAP-LTIDEVPVP--QPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGD-----WVI-----------------PSPPSS-----G 141
            G+EGVG V +VGS V+R+  GD     W+                      ++     G
Sbjct: 61  PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNG 120

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--------ALRMLEDFTTLNSGDSIV 193
            +  YVV D +    +         A     P+          L++    T    G  +V
Sbjct: 121 GYGEYVVADPNYVGLLPDKVGFVEIA-----PILCAGVTVYKGLKV----TDTRPGQWVV 171

Query: 194 QNGATSIV-----GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
                 I      G   +Q AR  G+    +       D      + LGA+   
Sbjct: 172 ------ISGIGGLGHVAVQYARAMGLRVAAV----DIDDAKLNLARRLGAEVAV 215

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 72.3 bits (178), Expect = 1e-14
 Identities = 58/268 (21%), Positives = 98/268 (36%), Gaps = 52/268 (19%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE--GVYPV 101
           M+  + + V       D  +++ + P  E KE++V ++M    I  SD++  E   +   
Sbjct: 1   MASDNLSAVLY--KQND--LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADF 56

Query: 102 RPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV-----IP--------------------- 135
             K P V G+E  G V  VG  V  L  GD V     +P                     
Sbjct: 57  IVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC 116

Query: 136 -SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFTTLNSGD 190
            +PP  G    Y V      HK+  +  +E  A  ++ PL+    A R       +  G 
Sbjct: 117 ATPPDDGNLARYYVHAADFCHKLPDNVSLEEGA--LLEPLSVGVHACRRAG----VQLGT 170

Query: 191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQL 247
           +++  GA  I G   +  A+  G   + +   R  S    E  K  GAD         + 
Sbjct: 171 TVLVIGAGPI-GLVSVLAAKAYGA-FV-VCTAR--SPRRLEVAKNCGADVTLVVDPAKEE 225

Query: 248 EVKNVKGLLANLPEPA-LGFNCVGGNSA 274
           E   ++ + + + +   +  +C G    
Sbjct: 226 ESSIIERIRSAIGDLPNVTIDCSGNEKC 253

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 63/272 (23%), Positives = 106/272 (38%), Gaps = 55/272 (20%)

Query: 41  SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI-----NRI 95
           +A   P + ++V    GP D  +++   P  E   N+V ++M +  I  SD+      RI
Sbjct: 1   AAAAKPNNLSLVVH--GPGD--LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRI 56

Query: 96  EGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV-----IP--------------- 135
            G + V+   P V G+E  G V  VGS+V  L PGD V      P               
Sbjct: 57  -GNFIVKK--PMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLS 113

Query: 136 -------SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDFT 184
                  +PP  G    +   + +  +K+  +   E  A  ++ PL+    A R      
Sbjct: 114 PSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGA--LIEPLSVGIHACRRGG--- 168

Query: 185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE 244
            +  G  ++  GA  I G   + +A+  G   + ++ D   S     K K +GAD V   
Sbjct: 169 -VTLGHKVLVCGAGPI-GMVTLLVAKAMGAAQV-VVTDL--SATRLSKAKEIGADLVLQI 223

Query: 245 SQLEV-KNVKGLLANLPEPA-LGFNCVGGNSA 274
           S+    +  + +   L     +   C G  ++
Sbjct: 224 SKESPQEIARKVEGQLGCKPEVTIECTGAEAS 255

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           AV +E   P    I+ IE+ PP   K ++V +K++A  +  +D   + G  P     P +
Sbjct: 10  AVAWEAGKPL--SIEEIEVAPP---KAHEVRIKIIATAVCHTDAYTLSGADP-EGCFPVI 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
            G+ G G V SVG  VT+L  GD VIP 
Sbjct: 64  LGHLGAGIVESVGEGVTKLKAGDTVIPL 91

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 71.1 bits (175), Expect = 3e-14
 Identities = 50/259 (19%), Positives = 85/259 (32%), Gaps = 49/259 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG--VYPVRPKVP 106
           +A+           + +++ P  E    ++ V++ AA I  +D++  +       R + P
Sbjct: 2   RALAKLAPEEG---LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------------PSS 140
            V G+E  G V +VG  V R   GD V                                 
Sbjct: 59  LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRD 118

Query: 141 GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL-----TALRMLEDFTTLNSGDSIVQN 195
           G +  YVV          KD P E AA  I+ P      T         +  SG S++  
Sbjct: 119 GGFAEYVVVPAENAWVNPKDLPFEVAA--ILEPFGNAVHTVYA-----GSGVSGKSVLIT 171

Query: 196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL 255
           GA  I G     + R  G   I ++ D   +       +      V    +  ++ V+ +
Sbjct: 172 GAGPI-GLMAAMVVRASGAGPI-LVSDP--NPYRLAFARPYADRLVNPLEEDLLEVVRRV 227

Query: 256 LANLPEPALGFNCVGGNSA 274
             +     +     G  +A
Sbjct: 228 TGS--GVEVLLEFSGNEAA 244

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 70.2 bits (173), Expect = 5e-14
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 50  AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVG 109
           AV   +       ++ +++     + ++V VK++A  +  +D+   +  YPV    PAV 
Sbjct: 10  AVTPCKGADF--ELQALKIRQP--QGDEVLVKVVATGMCHTDLIVRDQKYPVPL--PAVL 63

Query: 110 GYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGT 142
           G+EG G + ++G  VT L  GD V+ S    G 
Sbjct: 64  GHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGK 96

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 69.6 bits (171), Expect = 1e-13
 Identities = 56/279 (20%), Positives = 99/279 (35%), Gaps = 60/279 (21%)

Query: 41  SALMSPPSKAVVYE-----REGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDI--- 92
           ++  S  +  V                ++ ++    E+KE +V V + +  I  SD+   
Sbjct: 2   ASSASKTNIGVFTNPQHDLWISEASPSLESVQKGE-ELKEGEVTVAVRSTGICGSDVHFW 60

Query: 93  --NRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV-----IP---------- 135
               I G   V      V G+E  GEV +V  +V  +  GD V     +           
Sbjct: 61  KHGCI-GPMIVEC--DHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTG 117

Query: 136 ------------SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRM 179
                       +PP  G  + YV       HK+  +   E  A  ++ PL+     L+ 
Sbjct: 118 RYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIG-NMSYENGA--MLEPLSVALAGLQR 174

Query: 180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD 239
                 +  GD ++  GA  I G   +  A+  G   + +I D    +   +  K +  +
Sbjct: 175 AG----VRLGDPVLICGAGPI-GLITMLCAKAAGACPL-VITDI--DEGRLKFAKEICPE 226

Query: 240 EVF--TESQLEVKNVKGLLANL--PEPALGFNCVGGNSA 274
            V    E     ++ K ++ +    EPA+   C G  S+
Sbjct: 227 VVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESS 265

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           A+ ++   P    I+ IE+ PP   K  +V ++++A  + P+DIN  +         P V
Sbjct: 12  AIAWKTGSPL--CIEEIEVSPP---KACEVRIQVIATCVCPTDINATDPKKK--ALFPVV 64

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
            G+E  G V SVG  VT   PGD VIP 
Sbjct: 65  LGHECAGIVESVGPGVTNFKPGDKVIPF 92

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 58/233 (24%), Positives = 87/233 (37%), Gaps = 62/233 (26%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V E+   P   IK +E P   +   +V V++ A  +  +D++   G +PV+PK+P +
Sbjct: 2   KAAVVEQFKEP-LKIKEVEKP--TISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWV---------------------------IPSPPSSG 141
            G+EGVG V  VG  VT L  GD V                                  G
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT--------ALRMLEDFTTLNSGDSIV 193
            +  Y         K+  +   E AA     P+         AL++    T    G+ + 
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAA-----PIFCAGVTTYKALKV----TGAKPGEWVA 169

Query: 194 QNGATSIV-----GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
                 I      G   +Q A+  G++ + +       DE  E  K LGAD V
Sbjct: 170 ------IYGIGGLGHVAVQYAKAMGLNVVAV----DIGDEKLELAKELGADLV 212

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 8/88 (9%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           AV +E   P    ++ I + PP   K ++V +K+LA+ I  SD + ++ + P   K P +
Sbjct: 13  AVAWEPHKPL--SLETITVAPP---KAHEVRIKILASGICGSDSSVLKEIIP--SKFPVI 65

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
            G+E VG V S+G+ VT + PGD VIP 
Sbjct: 66  LGHEAVGVVESIGAGVTCVKPGDKVIPL 93

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 67.8 bits (166), Expect = 4e-13
 Identities = 31/270 (11%), Positives = 81/270 (30%), Gaps = 56/270 (20%)

Query: 49  KAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPV----RP 103
           KA++ +   PP++ +++ ++          + ++ +   I  +D   + G   +    + 
Sbjct: 2   KAIIVK---PPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKG 58

Query: 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP-------------------------- 137
           K   V G+E +G V          + GD V+P                            
Sbjct: 59  KDFLVLGHEAIGVVEESYHGF---SQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEA 115

Query: 138 ---PSSGTWQSYVVKDQSVWHKVSKDSPMEYA----ATIIVNPLTALRMLEDFTTLNSGD 190
                 G  + +   D     K+ K              I   +  +  ++    + + D
Sbjct: 116 GIHKMDGFMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCD 175

Query: 191 SIVQNGATSIV------GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE 244
               N    +V      G     + R  G+    +   R  ++  +  ++    +   + 
Sbjct: 176 DGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVW-MANRREPTEVEQTVIEETKTNYYNSS 234

Query: 245 SQLEVKNVKGLLANLPEPALGFNCVGGNSA 274
           +  +      L  ++ +  +  +  G +  
Sbjct: 235 NGYDK-----LKDSVGKFDVIIDATGADVN 259

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 67.8 bits (166), Expect = 4e-13
 Identities = 46/241 (19%), Positives = 80/241 (33%), Gaps = 57/241 (23%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG------VYPVR 102
            + V+     P+  ++ +  P +E K  ++ +K+ A  I  SD++  +       +YP  
Sbjct: 33  GSKVW---RYPEVRVEEVPEPRIE-KPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGL 88

Query: 103 PKVPAVGGYEGVGEVYSVGSAVT------RLAPGDWVIPSP------------------- 137
              P   G+E  G V   G          R   G+ V                       
Sbjct: 89  TGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCE 148

Query: 138 -------PSSGTWQSYVVKDQSVWHKV-------SKDSPMEYAATIIVNPLT-ALR-MLE 181
                     G +  YV  D      +         D      +  +V P + A   ++ 
Sbjct: 149 NLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGS--LVEPTSVAYNAVIV 206

Query: 182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV 241
               +  GD++V  G   I G   + I +H G   + I+ +   S+  +   K LGAD V
Sbjct: 207 RGGGIRPGDNVVILGGGPI-GLAAVAILKHAGASKV-ILSEP--SEVRRNLAKELGADHV 262

Query: 242 F 242
            
Sbjct: 263 I 263

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 67.2 bits (164), Expect = 1e-12
 Identities = 31/173 (17%), Positives = 56/173 (32%), Gaps = 5/173 (2%)

Query: 70   PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAP 129
             +     D    +    +N  D+    G         ++ G     +         R A 
Sbjct: 1554 ALPASCQDRLCSVYYTSLNFRDVMLATGKLSPD----SIPGKWLTRDCMLGMEFSGRDAS 1609

Query: 130  GDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSG 189
            G  V+   P+ G   + V+  Q    +V     +E AA++ +   TA   L     +  G
Sbjct: 1610 GRRVMGMVPAEGL-ATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPG 1668

Query: 190  DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF 242
            +S++ +  +  VGQ  I IA  RG      +         + +   L      
Sbjct: 1669 ESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFA 1721

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 64.2 bits (157), Expect = 6e-12
 Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 8/88 (9%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           AV++E + P    I+ +E+ PP   K ++V +KM+A  I  SD + + G       +P +
Sbjct: 12  AVLWEEKKPF--SIEEVEVAPP---KAHEVRIKMVATGICRSDDHVVSGTLV--TPLPVI 64

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
            G+E  G V S+G  VT + PGD VIP 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPL 92

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 64.2 bits (157), Expect = 6e-12
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 50  AVVYEREGPPDSVIKMIEL-PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           AV +E   P   VI+ IE+  P     N++ +K++A  +  +D+  +          P V
Sbjct: 12  AVAWEANKPL--VIEEIEVDVP---HANEIRIKIIATGVCHTDLYHLFEGKHKDG-FPVV 65

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPS 136
            G+EG G V SVG  VT   PG+ VIP 
Sbjct: 66  LGHEGAGIVESVGPGVTEFQPGEKVIPL 93

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 62.2 bits (152), Expect = 2e-11
 Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 21/193 (10%)

Query: 56  EGPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGV 114
           +G P  S  ++  +    +K  +V ++ L   ++P      +    ++     +G    V
Sbjct: 18  QGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK---RLKEGAVMMGQ--QV 72

Query: 115 GEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK----DSPMEYAATII 170
             V  V S  +    G  V+    +   W ++ + D     K+        P+  A   I
Sbjct: 73  ARV--VESKNSAFPAGSIVL----AQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTI 126

Query: 171 VNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA 229
             P LTA   L +   +  G++++ + A   VG  + QIA+ +G   +      AGSDE 
Sbjct: 127 GMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA----AGSDEK 182

Query: 230 KEKLKGLGADEVF 242
              LK +G D  F
Sbjct: 183 IAYLKQIGFDAAF 195

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 61.6 bits (150), Expect = 4e-11
 Identities = 42/237 (17%), Positives = 74/237 (31%), Gaps = 50/237 (21%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV--P 106
           KA+  +  G       +IE P  E +  +  V+ L   +  +D   I G +   P+    
Sbjct: 2   KAIAVK-RGEDR--PVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDH 58

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWV--IPSPPSS------------------------ 140
            V G+E VG V  V    T L  GD V      P +                        
Sbjct: 59  LVLGHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG 116

Query: 141 -----GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT----ALRMLEDF--TTLNSG 189
                G    +    +    ++   S  E     ++ P++    AL              
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRI-PRSQAELGF--LIEPISITEKALEHAYASRSAFDWDP 173

Query: 190 DSIVQNGATSIVGQCIIQIAR--HRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE 244
            S    G  S+ G   + + +   +G  ++  +  R   D   + ++ L A  V + 
Sbjct: 174 SSAFVLGNGSL-GLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSR 229

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 46/218 (21%), Positives = 75/218 (34%), Gaps = 31/218 (14%)

Query: 44  MSPPSKAVVYER--EGPP---DSVIKMIELP-PVEVKENDVCVKMLAAPINP------SD 91
           M+  +K V+ +    G P   D       +   V    N V VK L    +P        
Sbjct: 1   MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGK 60

Query: 92  INRIEGVY--PVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVK 149
            +           P  P  G   GV  +  + S       GD +         W+ Y V 
Sbjct: 61  PDPSTAALAQAYTPGQPIQGY--GVSRI--IESGHPDYKKGDLLW----GIVAWEEYSVI 112

Query: 150 DQSVWHKVSKDS---PMEYAATIIVNP-LTALRMLEDFTTLNSGDSIVQNGATSIVGQCI 205
                          P+ Y   ++  P +TA     +  +   G+++  + A+  VGQ +
Sbjct: 113 TPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLV 172

Query: 206 IQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVF 242
            Q+A+  G + +      AGS E  + LK   G D+ F
Sbjct: 173 GQLAKMMGCYVVGS----AGSKEKVDLLKTKFGFDDAF 206

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 59.1 bits (144), Expect = 3e-10
 Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 8/96 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRI-EGVYPVRPKVPA 107
           K             +  IE         D  V+ LA     SDI+ + EG    R     
Sbjct: 2   KGFAML--SIGK--VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERH--NM 55

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVI-PSPPSSGT 142
           + G+E VGEV  VGS V    PGD V+ P+      
Sbjct: 56  ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWR 91

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 55.0 bits (133), Expect = 8e-09
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 49  KAVVYEREGPPDSVIK-----MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 103
           + VVY   G     ++      ++ P  +  E+ V +K+++  I  SD + + G    + 
Sbjct: 4   RGVVYL--GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV 61

Query: 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVI 134
               V G+E  GEV   G  V  L  GD V 
Sbjct: 62  --GLVLGHEITGEVIEKGRDVENLQIGDLVS 90

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 51/264 (19%), Positives = 94/264 (35%), Gaps = 51/264 (19%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 103
           MS   +A+  E+     SV  +  +   ++ ++ V +K+  + IN  D    +    +  
Sbjct: 1   MSTLFQALQAEKNADDVSV-HVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVR 59

Query: 104 KVPAVGGYEGVGEV-------YSVGSAV------------------TRLAPGDWVIPSPP 138
           + P + G +  G V       ++ G  V                    + PGDW++P P 
Sbjct: 60  EYPLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASV-PGDWLVPLPQ 118

Query: 139 SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT 198
           +    ++ V                    T       ++  LE         S++  GAT
Sbjct: 119 NLSLKEAMVY------------------GTAGFTAALSVHRLEQNGLSPEKGSVLVTGAT 160

Query: 199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN 258
             VG   + +   RG   +       G+ EA + LK LGA EV +   +    +K L   
Sbjct: 161 GGVGGIAVSMLNKRGYDVVAST----GNREAADYLKQLGASEVISREDVYDGTLKALSK- 215

Query: 259 LPEPALGFNCVGGNSASKVLKFLR 282
             +     + VGG   + +L  ++
Sbjct: 216 -QQWQGAVDPVGGKQLASLLSKIQ 238

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 52.7 bits (127), Expect = 4e-08
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 49  KAVVYEREGPPDSVIKMIELP----PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPK 104
           K+VVY   G  D  ++ +  P         E+ V +K+++  I  SD +   G + V   
Sbjct: 4   KSVVYH--GTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPK- 60

Query: 105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWVI 134
              V G+E  GEV   GS V  +  GD V 
Sbjct: 61  -GHVLGHEITGEVVEKGSDVELMDIGDLVS 89

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 12/95 (12%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG-----V 98
           M    K   +    P   ++        E    DV ++++   I  +D+++ +       
Sbjct: 4   MEAERKTTGWAARDP-SGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSN 62

Query: 99  YPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV 133
           YP+      V G+E VGEV  VGS V++   GD V
Sbjct: 63  YPM------VPGHEVVGEVVEVGSDVSKFTVGDIV 91

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 59  PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVY 118
               ++ +++   E   NDV +++    +  SD++++   +      P V G+E VG V 
Sbjct: 31  AKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA-GTVYPCVPGHEIVGRVV 89

Query: 119 SVGSAVTRLAPGDWV 133
           +VG  V + APGD V
Sbjct: 90  AVGDQVEKYAPGDLV 104

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 46/259 (17%), Positives = 85/259 (32%), Gaps = 51/259 (19%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A V  +     +   +  +   ++ E DV V++  + +N  D         +    P V
Sbjct: 5   QAFVVNKTETEFTA-GVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFV 63

Query: 109 GGYEGVGEV-------YSVGSAV------------------TRLAPGDWVIPSPPSSGTW 143
            G +  G V       +  G  V                   RL  G+W++P P      
Sbjct: 64  PGIDLAGVVVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARL-HGEWLVPLPKGLTLK 122

Query: 144 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203
           ++  +                + A + ++       LE+         ++  GAT  VG 
Sbjct: 123 EAMAIGTAG------------FTAALSIH------RLEEHGLTPERGPVLVTGATGGVGS 164

Query: 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA 263
             + +   RG           G     + L+ LGA EV     +  + ++ L       A
Sbjct: 165 LAVSMLAKRGYTVEAST----GKAAEHDYLRVLGAKEVLAREDVMAERIRPLDK--QRWA 218

Query: 264 LGFNCVGGNSASKVLKFLR 282
              + VGG + + VL  +R
Sbjct: 219 AAVDPVGGRTLATVLSRMR 237

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 52/222 (23%), Positives = 85/222 (38%), Gaps = 31/222 (13%)

Query: 41  SALMSPPSKAVVY----EREGPP-DSVIKMIELP-PVEVKENDVCVKMLAAPINP----- 89
           +A  +   + VV      + G P     +M E+  P  + E  V V+ L   ++P     
Sbjct: 2   AAAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCR 61

Query: 90  -SDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVV 148
            ++    + + P +      GG  G+G +    S  T L  GD+V         WQ+ V+
Sbjct: 62  MNEDTGTDYITPWQLSQVVDGG--GIGII--EESKHTNLTKGDFVTSF---YWPWQTKVI 114

Query: 149 KDQSVWHKVSK---DSPMEYAATIIVNP-LTALRMLEDFTTLNSGDS--IVQNGATSIVG 202
            D +   KV     D  + Y    I  P LT+L  +++   + +G +  +V +GA    G
Sbjct: 115 LDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACG 174

Query: 203 QCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKG-LGADEVF 242
               QI    G    + I     G+ E    L   LG D   
Sbjct: 175 SVAGQIGHFLGCSRVVGI----CGTHEKCILLTSELGFDAAI 212

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 49.1 bits (118), Expect = 5e-07
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 59  PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVY 118
            D   K  +     V   DV + +L A I  SDI+     +      P + G+E  G + 
Sbjct: 13  KDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWK-EGIYPMIPGHEIAGIIK 71

Query: 119 SVGSAVTRLAPGDWV 133
            VG  V +   GD V
Sbjct: 72  EVGKGVKKFKIGDVV 86

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINII 220
              AAT  V  LTA   L +   L+ G+ ++ + AT  VG   + IA+  G  I++    
Sbjct: 13  DNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTT--- 69

Query: 221 RDRAGSDEAKEKLKGLGADEVF 242
              AGSD  +E L  LG + V 
Sbjct: 70  ---AGSDAKREMLSRLGVEYVG 88

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 11/80 (13%)

Query: 59  PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG-----VYPVRPKVPAVGGYEG 113
               +           E DV  K+L   +  SD++ I+      +YP+   VP   G+E 
Sbjct: 25  QSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPL---VP---GHEI 78

Query: 114 VGEVYSVGSAVTRLAPGDWV 133
           VGEV  VGS V ++  GD V
Sbjct: 79  VGEVTEVGSKVKKVNVGDKV 98

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 45/261 (17%), Positives = 82/261 (31%), Gaps = 57/261 (21%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A++ E++        +  L   ++   DV V +  + +N  D   I G   +    P +
Sbjct: 2   QALILEQQDGKTLA-SVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMI 60

Query: 109 GGYEGVGEV-------YSVGSAV------------------TRLAPGDWVIPSPPSSGTW 143
            G +  G V       +  G  V                   R+  GDW++  P    + 
Sbjct: 61  PGIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARV-KGDWLVALPAGLSSR 119

Query: 144 QSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ 203
            + ++                   T     +  +  LED         +V  GA+  VG 
Sbjct: 120 NAMII------------------GTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGS 161

Query: 204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKN--VKGLLANLPE 261
             + +    G     +     G +     LK LGA+ + +  +        K L A    
Sbjct: 162 TAVALLHKLGYQVAAVS----GRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAG--- 214

Query: 262 PALGFNCVGGNSASKVLKFLR 282
                + VG    +KVL  + 
Sbjct: 215 ---AIDTVGDKVLAKVLAQMN 232

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 4e-05
 Identities = 49/273 (17%), Positives = 74/273 (27%), Gaps = 99/273 (36%)

Query: 30  RRVQAQRVRAF---------SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCV 80
              Q + V+ F           LMSP    +  E+  P       IE    +   ND   
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKFLMSP----IKTEQRQPSMMTRMYIE--QRDRLYNDN-- 123

Query: 81  KMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWV-IPSPPS 139
                     +++R++    +R                    A+  L P   V I     
Sbjct: 124 ----QVFAKYNVSRLQPYLKLR-------------------QALLELRPAKNVLIDGVLG 160

Query: 140 SG-TW-QSYVVKDQSV---------WHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS 188
           SG TW    V     V         W  +   +          +P T L ML+       
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN----------SPETVLEMLQKLLYQ-- 208

Query: 189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL- 247
              I  N  +             R  HS NI          + +L+ L   + +    L 
Sbjct: 209 ---IDPNWTS-------------RSDHSSNIKLR---IHSIQAELRRLLKSKPYENCLLV 249

Query: 248 --EVKNVKGLLANLPEPALGFNCVGGNSASKVL 278
              V+N K         A   +C       K+L
Sbjct: 250 LLNVQNAKAW------NAFNLSC-------KIL 269

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 42.5 bits (101), Expect = 7e-05
 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 13/97 (13%)

Query: 44  MSPPSKAVVYEREGP-PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG----- 97
           MS P K      +        K  +  P    ++D+ +K+ A  +  SDI+   G     
Sbjct: 1   MSYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM 60

Query: 98  VYPVRPKVPAVGGYEGVGEVYSVGSAV-TRLAPGDWV 133
             P+   V    G+E VG+V  +G    + L  G  V
Sbjct: 61  KMPL---VV---GHEIVGKVVKLGPKSNSGLKVGQRV 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	288
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.83
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.74
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.51
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.37
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.37
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.37
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.34
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.22
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.18
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.06
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.97
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.91
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.87
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.86
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.84
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.82
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.79
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.76
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.76
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.75
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.74
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.73
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.72
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.7
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.68
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.65
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.63
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.63
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.62
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.61
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.59
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.57
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.56
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.55
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.55
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.54
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.54
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.54
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.53
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.52
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.52
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.52
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.5
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.49
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.47
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.46
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.45
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.45
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.45
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.44
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.43
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.43
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.42
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.42
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.42
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.4
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.39
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.39
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.39
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.38
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.38
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.37
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.37
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.37
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.37
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.37
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.37
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.36
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.36
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.36
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.36
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.35
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.35
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.35
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.35
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.35
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.35
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.34
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.34
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.34
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.34
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.34
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.33
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.33
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.32
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.31
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.31
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.31
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.3
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.3
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.29
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.29
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.28
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.28
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.28
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.28
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.28
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.28
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.27
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.27
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.27
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.27
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.27
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.27
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.26
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.26
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.26
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.26
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.26
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.25
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.25
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.25
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.25
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.25
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.25
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.24
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.24
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.24
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.24
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.23
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.23
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.23
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.23
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.23
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.23
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.23
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.23
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.22
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.22
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.22
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.22
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.21
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.21
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.21
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.2
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.2
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.2
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.2
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.19
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.19
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.18
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.18
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.18
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.18
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.18
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.17
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.17
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.17
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.17
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.17
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.17
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.16
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.16
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.16
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.16
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.16
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.15
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.15
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.15
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.14
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.14
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.14
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.14
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.14
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.14
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.14
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.14
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.14
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.14
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.13
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.13
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.13
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.13
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.13
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.13
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.13
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.13
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.13
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.12
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.12
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.11
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.11
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.1
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.1
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.1
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.09
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.08
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.08
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.08
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.08
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.08
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.08
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.08
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.08
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.08
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.07
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.07
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.07
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.06
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.06
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.06
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.06
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.05
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.05
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.05
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.04
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.04
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.02
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.02
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.02
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.02
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.02
1spx_A	278	Short-chain reductase family member (5L265); paral	97.01
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.99
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.99
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.99
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.98
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.98
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.98
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.98
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.97
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.97
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.96
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.94
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.94
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.94
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.93
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.93
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.92
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.92
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.91
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.9
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.9
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.9
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.9
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.89
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.89
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.89
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.87
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.87
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.87
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.86
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.86
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.86
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.86
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.86
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	96.85
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.84
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.84
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.83
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.82
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.82
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.8
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.8
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.8
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.79
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.78
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.77
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.77
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.76
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.75
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.75
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.73
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.73
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.73
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.73
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.73
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.71
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.7
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.68
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.66
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.62
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.62
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.62
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.6
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.6
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.59
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.58
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.57
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.57
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	96.57
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.56
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.54
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.54
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.53
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.53
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.53
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	96.49
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.49
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	96.49
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.47
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.45
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.44
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.43
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.42
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.41
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.41
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.4
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.39
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.39
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.37
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.36
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.36
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	96.35
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.35
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.34
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.3
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.3
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.29
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.29
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.28
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.28
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.26
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	96.26
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.24
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	96.2
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.2
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.19
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.19
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.18
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.18
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.15
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.14
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.14
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.13
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	96.13
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.11
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.06
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.05
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.05
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.05
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.04
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.02
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.02
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.01
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	96.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	96.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.98
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.97
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.95
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	95.95
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	95.91
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.9
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	95.83
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	95.82
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.81
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	95.8
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.8
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.77
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.77
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.77
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.77
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.76
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	95.75
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.73
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.73
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	95.73
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	95.73
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.71
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.7
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	95.7
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	95.66
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	95.61
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.61
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.6
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	95.59
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	95.58
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.56
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.55
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.53
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.53
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	95.53
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	95.51
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.5
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.47
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.47
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.47
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	95.46
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	95.45
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.44
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	95.36
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.34
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.33
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	95.31
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.3
1r0k_A	388	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	95.28
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.27
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	95.26
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.26
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	95.24
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	95.21
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.21
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.21
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.2
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	95.12
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	95.11
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.05
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.0
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	94.97
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	94.95
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	94.93
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	94.92
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	94.92
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	94.89
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	94.85
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	94.84
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	94.84
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	94.83
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	94.8
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	94.77
4f6c_A	427	AUSA reductase domain protein; thioester reductase	94.74
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	94.72
4fcc_A	450	Glutamate dehydrogenase; protein complex, rossmann	94.72
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	94.71
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	94.71
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	94.68
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	94.66
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	94.66
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	94.64
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	94.63
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.62
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.59
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	94.54
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	94.54

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=8.6e-47  Score=339.13  Aligned_cols=248  Identities=45%  Similarity=0.740  Sum_probs=217.0

Q ss_pred             ccCCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEe
Q 023007           41 SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (288)
Q Consensus        41 ~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~  120 (288)
                      ...||.+||++++.+++.+.+.+++++.|.|+++++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+++
T Consensus        20 ~~~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~v   99 (357)
T 1zsy_A           20 FQSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAV   99 (357)
T ss_dssp             CCCCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEE
T ss_pred             hhhCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEe
Confidence            34578889999999988754458899999999999999999999999999999999876654457899999999999999


Q ss_pred             cCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCCh
Q 023007          121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI  200 (288)
Q Consensus       121 G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~  200 (288)
                      |+++++|++||+|++.....|+|+||++++++.++++|+++++++|++++++++|||+++.+.+++++|++|||+|++|+
T Consensus       100 G~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~  179 (357)
T 1zsy_A          100 GSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSG  179 (357)
T ss_dssp             CTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSH
T ss_pred             CCCCCCCCCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCH
Confidence            99999999999999886556999999999999999999999999999999999999999988889999999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhh
Q 023007          201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF  280 (288)
Q Consensus       201 vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~  280 (288)
                      +|++++|+|+.+|++++++++.....++++++++++|+++++++++...+.+.+++++.+++|+||||+|++....++++
T Consensus       180 vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~  259 (357)
T 1zsy_A          180 VGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQ  259 (357)
T ss_dssp             HHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEECCCcHHHHHHHHh
Confidence            99999999999999999998653333456788999999999987543223455555554249999999999888789999


Q ss_pred             ccCCCeeC
Q 023007          281 LRFREEQW  288 (288)
Q Consensus       281 l~~~G~~v  288 (288)
                      ++++|+++
T Consensus       260 l~~~G~iv  267 (357)
T 1zsy_A          260 LARGGTMV  267 (357)
T ss_dssp             SCTTCEEE
T ss_pred             hCCCCEEE
Confidence            99999985

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=7.1e-46  Score=331.32  Aligned_cols=240  Identities=22%  Similarity=0.223  Sum_probs=218.2

Q ss_pred             ccCCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEe
Q 023007           41 SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (288)
Q Consensus        41 ~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~  120 (288)
                      ...+|.+||++++..++.+.. +++++.|.|++.++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+++
T Consensus        15 ~~~~p~~MkA~~~~~~g~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~v   93 (342)
T 4eye_A           15 QTQGPGSMKAIQAQSLSGPEG-LVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSA   93 (342)
T ss_dssp             ---CCCEEEEEEECSSSGGGG-EEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEEC
T ss_pred             cccCCcceEEEEEecCCCCce-eEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEE
Confidence            345688999999999887643 8999999999999999999999999999999999987665578999999999999999


Q ss_pred             cCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCCh
Q 023007          121 GSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI  200 (288)
Q Consensus       121 G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~  200 (288)
                      |++++ |++||+|+++.. .|+|+||++++.+.++++|+++++++|++++.+++|||+++.+.+++++|++|||+|++|+
T Consensus        94 G~~v~-~~vGDrV~~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~  171 (342)
T 4eye_A           94 PEGSG-IKPGDRVMAFNF-IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGG  171 (342)
T ss_dssp             CTTSS-CCTTCEEEEECS-SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSH
T ss_pred             CCCCC-CCCCCEEEEecC-CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCH
Confidence            99999 999999999864 5999999999999999999999999999999999999999988899999999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhh
Q 023007          201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKF  280 (288)
Q Consensus       201 vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~  280 (288)
                      +|++++|+++..|++|++++    .+++++++++++|+++++++++...+.+.+++++.+ +|++|||+|++.++.++++
T Consensus       172 iG~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g-~Dvvid~~g~~~~~~~~~~  246 (342)
T 4eye_A          172 IGTAAIQIAKGMGAKVIAVV----NRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAG-VDMVVDPIGGPAFDDAVRT  246 (342)
T ss_dssp             HHHHHHHHHHHTTCEEEEEE----SSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSC-EEEEEESCC--CHHHHHHT
T ss_pred             HHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCC-ceEEEECCchhHHHHHHHh
Confidence            99999999999999999998    578899999999999999988555678888888776 9999999999988999999


Q ss_pred             ccCCCeeC
Q 023007          281 LRFREEQW  288 (288)
Q Consensus       281 l~~~G~~v  288 (288)
                      ++++|+++
T Consensus       247 l~~~G~iv  254 (342)
T 4eye_A          247 LASEGRLL  254 (342)
T ss_dssp             EEEEEEEE
T ss_pred             hcCCCEEE
Confidence            99999985

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.6e-45  Score=330.36  Aligned_cols=239  Identities=23%  Similarity=0.237  Sum_probs=220.1

Q ss_pred             cCCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEec
Q 023007           42 ALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        42 ~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G  121 (288)
                      .++|.+||++++.+++.+ +.+++++.|.|++.++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+++|
T Consensus        23 ~~~p~~MkA~~~~~~g~~-~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG  101 (353)
T 4dup_A           23 MSLPQEMRFVDLKSFGGP-DVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVG  101 (353)
T ss_dssp             CCCCSSEEEEEESSSSSG-GGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEEC
T ss_pred             CCCChheeEEEEccCCCc-cceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEEC
Confidence            457889999999998876 3489999999999999999999999999999999999877666678999999999999999


Q ss_pred             CCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChH
Q 023007          122 SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIV  201 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~v  201 (288)
                      +++++|++||+|+++.. .|+|+||+++|++.++++|+++++++|++++.+++|||+++.+.+++++|++|||+|++|++
T Consensus       102 ~~v~~~~vGdrV~~~~~-~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~i  180 (353)
T 4dup_A          102 PGVSGYAVGDKVCGLAN-GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGI  180 (353)
T ss_dssp             TTCCSCCTTCEEEEECS-SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHH
T ss_pred             CCCCCCCCCCEEEEecC-CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHH
Confidence            99999999999999864 59999999999999999999999999999999999999999888999999999999999999


Q ss_pred             HHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhh
Q 023007          202 GQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKF  280 (288)
Q Consensus       202 G~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~  280 (288)
                      |++++|+++..|++|++++    .++++++.++++|++.++++.+.+ .+.+.+++ +.+ +|++|||+|++.++.++++
T Consensus       181 G~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~-~~g-~Dvvid~~g~~~~~~~~~~  254 (353)
T 4dup_A          181 GTTAIQLARAFGAEVYATA----GSTGKCEACERLGAKRGINYRSEDFAAVIKAET-GQG-VDIILDMIGAAYFERNIAS  254 (353)
T ss_dssp             HHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-SSC-EEEEEESCCGGGHHHHHHT
T ss_pred             HHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHh-CCC-ceEEEECCCHHHHHHHHHH
Confidence            9999999999999999998    689999999999999999987654 46777888 544 9999999999988999999


Q ss_pred             ccCCCeeC
Q 023007          281 LRFREEQW  288 (288)
Q Consensus       281 l~~~G~~v  288 (288)
                      ++++|+++
T Consensus       255 l~~~G~iv  262 (353)
T 4dup_A          255 LAKDGCLS  262 (353)
T ss_dssp             EEEEEEEE
T ss_pred             hccCCEEE
Confidence            99999975

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=4.1e-46  Score=332.59  Aligned_cols=239  Identities=29%  Similarity=0.422  Sum_probs=219.2

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      |+.+||+++++++|.+.+++++++.|.|++.++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+++|++
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~   80 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAF   80 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTT
T ss_pred             CCcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCC
Confidence            45689999999999875568999999999999999999999999999999999987765678999999999999999999


Q ss_pred             CCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      +++|++||+|+++.. .|+|+||+++|++.++++|+++++++|+++++.++|||+++.+.+++++|++|||+|++|++|+
T Consensus        81 v~~~~vGdrV~~~~~-~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~  159 (340)
T 3gms_A           81 VSRELIGKRVLPLRG-EGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGH  159 (340)
T ss_dssp             SCGGGTTCEEEECSS-SCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHH
T ss_pred             CCCCCCCCEEEecCC-CccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHH
Confidence            999999999998754 6999999999999999999999999999999999999999998899999999999999889999


Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR  282 (288)
Q Consensus       204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~  282 (288)
                      +++|+++..|++|++++    .+++++++++++|+++++|+++.+ .+.+.+++++.+ +|++|||+|++....++++|+
T Consensus       160 ~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g-~Dvvid~~g~~~~~~~~~~l~  234 (340)
T 3gms_A          160 LFAQLSQILNFRLIAVT----RNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIG-ADAAIDSIGGPDGNELAFSLR  234 (340)
T ss_dssp             HHHHHHHHHTCEEEEEE----SSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSC-EEEEEESSCHHHHHHHHHTEE
T ss_pred             HHHHHHHHcCCEEEEEe----CCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCC-CcEEEECCCChhHHHHHHHhc
Confidence            99999999999999998    577888999999999999987654 577888888776 999999999998877889999


Q ss_pred             CCCeeC
Q 023007          283 FREEQW  288 (288)
Q Consensus       283 ~~G~~v  288 (288)
                      ++|++|
T Consensus       235 ~~G~iv  240 (340)
T 3gms_A          235 PNGHFL  240 (340)
T ss_dssp             EEEEEE
T ss_pred             CCCEEE
Confidence            999985

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.8e-45  Score=331.20  Aligned_cols=239  Identities=28%  Similarity=0.276  Sum_probs=216.2

Q ss_pred             cCCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEec
Q 023007           42 ALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        42 ~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G  121 (288)
                      ..|+.+||++++++++.  +.+++++.|.|++.++||+|||.+++||++|++++.|.++....+|.++|||++|+|+++|
T Consensus        22 ~~m~~~mkA~~~~~~~~--~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG   99 (363)
T 3uog_A           22 SMMSKWMQEWSTETVAP--HDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVG   99 (363)
T ss_dssp             -CCCSEEEEEEBSCTTT--TCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEEC
T ss_pred             ccCchhhEEEEEccCCC--CCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEEC
Confidence            45688899999998742  2389999999999999999999999999999999998776555789999999999999999


Q ss_pred             CCCCCCCCCCEEEecCC-----------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHH
Q 023007          122 SAVTRLAPGDWVIPSPP-----------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR  178 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~~-----------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~  178 (288)
                      +++++|++||+|++.+.                       ..|+|+||+++|++.++++|+++++++||+++.+++|||+
T Consensus       100 ~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  179 (363)
T 3uog_A          100 KSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWF  179 (363)
T ss_dssp             TTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHH
T ss_pred             CCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHH
Confidence            99999999999998621                       2599999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-ccHHHHHHHhc
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-LEVKNVKGLLA  257 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~i~~~~~  257 (288)
                      ++.+.+++++|++|||+| +|++|++++|+|+.+|++|++++    .+++++++++++|+++++|+.. ...+.++++++
T Consensus       180 al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~  254 (363)
T 3uog_A          180 ALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTS----SSREKLDRAFALGADHGINRLEEDWVERVYALTG  254 (363)
T ss_dssp             HHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHT
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEe----cCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhC
Confidence            998889999999999999 59999999999999999999998    6889999999999999999553 34578888998


Q ss_pred             CCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +.+ +|++|||+|+..++.++++|+++|+++
T Consensus       255 g~g-~D~vid~~g~~~~~~~~~~l~~~G~iv  284 (363)
T 3uog_A          255 DRG-ADHILEIAGGAGLGQSLKAVAPDGRIS  284 (363)
T ss_dssp             TCC-EEEEEEETTSSCHHHHHHHEEEEEEEE
T ss_pred             CCC-ceEEEECCChHHHHHHHHHhhcCCEEE
Confidence            876 999999999888899999999999985

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=5.8e-45  Score=323.24  Aligned_cols=234  Identities=26%  Similarity=0.322  Sum_probs=217.2

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||+++++++|.++ .+++++.|.|++.++||+|||.++++|++|++++.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus         2 MkA~~~~~~g~~~-~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~vG~~v~~~   79 (325)
T 3jyn_A            2 AKRIQFSTVGGPE-VLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAGVVEAVGDEVTRF   79 (325)
T ss_dssp             EEEEEBSSCSSGG-GCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             cEEEEEecCCCcc-eeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCceeEEEEEEECCCCCCC
Confidence            8999999998874 4899999999999999999999999999999999997765 4678999999999999999999999


Q ss_pred             CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHH
Q 023007          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (288)
Q Consensus       128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~  207 (288)
                      ++||+|+......|+|+||+++|++.++++|+++++++|++++..++|||+++.+.+++++|++|||+|++|++|++++|
T Consensus        80 ~~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~  159 (325)
T 3jyn_A           80 KVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQ  159 (325)
T ss_dssp             CTTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHH
T ss_pred             CCCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHH
Confidence            99999998875679999999999999999999999999999999999999999998999999999999988999999999


Q ss_pred             HHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCe
Q 023007          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREE  286 (288)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~  286 (288)
                      +++..|++|++++    .+++++++++++|+++++|+.+.+ .+.+.+++++.+ +|++|||+|++.++.++++++++|+
T Consensus       160 ~a~~~Ga~Vi~~~----~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g-~Dvvid~~g~~~~~~~~~~l~~~G~  234 (325)
T 3jyn_A          160 WAKALGAKLIGTV----SSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKK-CPVVYDGVGQDTWLTSLDSVAPRGL  234 (325)
T ss_dssp             HHHHHTCEEEEEE----SSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCC-EEEEEESSCGGGHHHHHTTEEEEEE
T ss_pred             HHHHCCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCC-ceEEEECCChHHHHHHHHHhcCCCE
Confidence            9999999999998    689999999999999999987654 577888888776 9999999999888999999999999


Q ss_pred             eC
Q 023007          287 QW  288 (288)
Q Consensus       287 ~v  288 (288)
                      ++
T Consensus       235 iv  236 (325)
T 3jyn_A          235 VV  236 (325)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1.6e-44  Score=321.58  Aligned_cols=236  Identities=24%  Similarity=0.303  Sum_probs=216.6

Q ss_pred             CCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      ++|.+||++++++++.+ +.+++++.|.|++.++||+|||.+++||++|++++.|.++.  .+|.++|||++|+|+++|+
T Consensus         4 ~~p~~mka~~~~~~g~~-~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~P~i~G~e~~G~V~~vG~   80 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGGY-DVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC--EKPYVLGREASGTVVAKGK   80 (334)
T ss_dssp             -CCSEEEEEEESSSSSG-GGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCC--CSSEECCSEEEEEEEEECT
T ss_pred             CCchheEEEEEecCCCC-ceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCccccceEEEEEEECC
Confidence            46889999999998875 34889999999999999999999999999999999987664  5689999999999999999


Q ss_pred             CCCCCCCCCEEEecCCCCcccceEEEee-CCcEEEcCCCCChhh---hcccccchHHHHHHHHhhcCCCCCCeEEEeCCC
Q 023007          123 AVTRLAPGDWVIPSPPSSGTWQSYVVKD-QSVWHKVSKDSPMEY---AATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT  198 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~~~G~~a~~~~~~-~~~l~~ip~~~~~~~---aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  198 (288)
                      ++++|++||+|+++.  .|+|+||++++ .+.++++|+++++++   +++++..++|||+++.+.+++++|++|||+|++
T Consensus        81 ~v~~~~~GdrV~~~~--~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~  158 (334)
T 3qwb_A           81 GVTNFEVGDQVAYIS--NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAA  158 (334)
T ss_dssp             TCCSCCTTCEEEEEC--SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred             CCCCCCCCCEEEEee--CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCC
Confidence            999999999999875  58999999999 999999999999999   888888999999999988899999999999988


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHH
Q 023007          199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKV  277 (288)
Q Consensus       199 g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a  277 (288)
                      |++|++++|+++..|++|++++    .+++++++++++|+++++++.+.+ .+.+.+++++.+ +|++|||+|+..++.+
T Consensus       159 g~iG~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g-~D~vid~~g~~~~~~~  233 (334)
T 3qwb_A          159 GGVGLILNQLLKMKGAHTIAVA----STDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKG-VDASFDSVGKDTFEIS  233 (334)
T ss_dssp             BHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSC-EEEEEECCGGGGHHHH
T ss_pred             CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCC-ceEEEECCChHHHHHH
Confidence            9999999999999999999998    579999999999999999987654 577888888766 9999999999888999


Q ss_pred             HhhccCCCeeC
Q 023007          278 LKFLRFREEQW  288 (288)
Q Consensus       278 ~~~l~~~G~~v  288 (288)
                      +++|+++|++|
T Consensus       234 ~~~l~~~G~iv  244 (334)
T 3qwb_A          234 LAALKRKGVFV  244 (334)
T ss_dssp             HHHEEEEEEEE
T ss_pred             HHHhccCCEEE
Confidence            99999999985

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.8e-44  Score=326.43  Aligned_cols=236  Identities=21%  Similarity=0.271  Sum_probs=212.9

Q ss_pred             cCCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEec
Q 023007           42 ALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        42 ~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G  121 (288)
                      +.++.+||++++++++.+   +++++.|.|++.++||+|||.+++||++|++++.|.++. ..+|.++|||++|+|+++|
T Consensus         3 ~~~~~tmkA~v~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG   78 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKP---LVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVG   78 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEEEEC
T ss_pred             cccceeeEEEEEecCCCc---cEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCC-CCCCccCCccceEEEEEeC
Confidence            457889999999999875   889999999999999999999999999999999987653 3679999999999999999


Q ss_pred             CCCCCCCCCCEEEecCCC------------------------------------------------CcccceEEEeeCCc
Q 023007          122 SAVTRLAPGDWVIPSPPS------------------------------------------------SGTWQSYVVKDQSV  153 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~~~------------------------------------------------~G~~a~~~~~~~~~  153 (288)
                      +++++|++||+|++.+..                                                .|+|+||+++|++.
T Consensus        79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  158 (378)
T 3uko_A           79 EGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVS  158 (378)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             CCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhh
Confidence            999999999999976531                                                16999999999999


Q ss_pred             EEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHH
Q 023007          154 WHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEK  232 (288)
Q Consensus       154 l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~  232 (288)
                      ++++|+++++++|+.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .+++++++
T Consensus       159 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~----~~~~~~~~  233 (378)
T 3uko_A          159 VAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGID----IDSKKYET  233 (378)
T ss_dssp             EEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEEC----SCTTHHHH
T ss_pred             eEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHH
Confidence            99999999999999999999999999988899999999999998 9999999999999999 788776    57889999


Q ss_pred             HHhCCCCEEEeCCc---ccHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007          233 LKGLGADEVFTESQ---LEVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW  288 (288)
Q Consensus       233 ~~~~g~~~v~~~~~---~~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v  288 (288)
                      ++++|+++++++++   ...+.+++++++ + +|+||||+|++. ++.++++++++ |+++
T Consensus       234 a~~lGa~~vi~~~~~~~~~~~~i~~~~~g-g-~D~vid~~g~~~~~~~~~~~l~~g~G~iv  292 (378)
T 3uko_A          234 AKKFGVNEFVNPKDHDKPIQEVIVDLTDG-G-VDYSFECIGNVSVMRAALECCHKGWGTSV  292 (378)
T ss_dssp             HHTTTCCEEECGGGCSSCHHHHHHHHTTS-C-BSEEEECSCCHHHHHHHHHTBCTTTCEEE
T ss_pred             HHHcCCcEEEccccCchhHHHHHHHhcCC-C-CCEEEECCCCHHHHHHHHHHhhccCCEEE
Confidence            99999999999863   345788889888 5 999999999965 59999999996 9875

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=2.8e-44  Score=321.12  Aligned_cols=234  Identities=23%  Similarity=0.257  Sum_probs=211.5

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCC-CCCCcccccceEEEEEEecCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR-PKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~-~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      |.+||++++.+++.+   +++++.|.|++.++||+|||.++++|++|++++.|..+.. ..+|.++|||++|+|+++|++
T Consensus         5 ~~~mka~~~~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~   81 (343)
T 3gaz_A            5 TPTMIAAVVEEANGP---FVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPE   81 (343)
T ss_dssp             -CEEEEEEECSTTCC---EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTT
T ss_pred             chhheEEEEecCCCc---eEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCC
Confidence            568999999999876   8999999999999999999999999999999998865322 467899999999999999999


Q ss_pred             CCCCCCCCEEEecCC----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCC
Q 023007          124 VTRLAPGDWVIPSPP----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS  199 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g  199 (288)
                      +++|++||+|+++..    ..|+|+||+++|.+.++++|+++++++|+.++.+++|||+++.+.+++++|++|||+|++|
T Consensus        82 v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g  161 (343)
T 3gaz_A           82 VDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGG  161 (343)
T ss_dssp             CCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTS
T ss_pred             CCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCC
Confidence            999999999998753    2699999999999999999999999999999999999999998889999999999999889


Q ss_pred             hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHh
Q 023007          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (288)
Q Consensus       200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~  279 (288)
                      ++|++++|+++..|++|+++.     +++++++++++|++. ++......+.+.+++++.+ +|++|||+|++.++.+++
T Consensus       162 ~iG~~~~q~a~~~Ga~Vi~~~-----~~~~~~~~~~lGa~~-i~~~~~~~~~~~~~~~~~g-~D~vid~~g~~~~~~~~~  234 (343)
T 3gaz_A          162 GVGHVAIQIALARGARVFATA-----RGSDLEYVRDLGATP-IDASREPEDYAAEHTAGQG-FDLVYDTLGGPVLDASFS  234 (343)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEE-----CHHHHHHHHHHTSEE-EETTSCHHHHHHHHHTTSC-EEEEEESSCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEe-----CHHHHHHHHHcCCCE-eccCCCHHHHHHHHhcCCC-ceEEEECCCcHHHHHHHH
Confidence            999999999999999999884     688899999999998 7744445677888888776 999999999988899999


Q ss_pred             hccCCCeeC
Q 023007          280 FLRFREEQW  288 (288)
Q Consensus       280 ~l~~~G~~v  288 (288)
                      +|+++|++|
T Consensus       235 ~l~~~G~iv  243 (343)
T 3gaz_A          235 AVKRFGHVV  243 (343)
T ss_dssp             HEEEEEEEE
T ss_pred             HHhcCCeEE
Confidence            999999985

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=3.5e-44  Score=320.87  Aligned_cols=233  Identities=24%  Similarity=0.287  Sum_probs=211.0

Q ss_pred             cceEEEEccCCC--CCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           47 PSKAVVYEREGP--PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        47 ~~~a~~~~~~g~--~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      +||+++++++|.  +.+.+++++.|.|+++++||+|||.+++||++|++.+.|.   ...+|.++|||++|+|+++|+++
T Consensus         2 ~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~~p~i~G~e~~G~V~~vG~~v   78 (346)
T 3fbg_A            2 SLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD---VSKAPRVLGFDAIGVVESVGNEV   78 (346)
T ss_dssp             CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC---CSSSCBCCCCCEEEEEEEECTTC
T ss_pred             CcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC---CCCCCcCcCCccEEEEEEeCCCC
Confidence            689999999872  2245999999999999999999999999999999998876   23568999999999999999999


Q ss_pred             CCCCCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCC------CCCeEEEeC
Q 023007          125 TRLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN------SGDSIVQNG  196 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~------~g~~vlI~g  196 (288)
                      ++|++||+|++...  ..|+|+||+++|.+.++++|+++++++|++++++++|||+++.+.++++      +|++|||+|
T Consensus        79 ~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~g  158 (346)
T 3fbg_A           79 TMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIIN  158 (346)
T ss_dssp             CSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEES
T ss_pred             CcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEc
Confidence            99999999998742  3699999999999999999999999999999999999999999889998      999999998


Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH-H
Q 023007          197 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-S  275 (288)
Q Consensus       197 ~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~  275 (288)
                      ++|++|++++|+|+..|++|++++    .+++++++++++|+++++++++...+.++++ .+.+ +|++|||+|+... +
T Consensus       159 g~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~~~g-~Dvv~d~~g~~~~~~  232 (346)
T 3fbg_A          159 GAGGVGSIATQIAKAYGLRVITTA----SRNETIEWTKKMGADIVLNHKESLLNQFKTQ-GIEL-VDYVFCTFNTDMYYD  232 (346)
T ss_dssp             TTSHHHHHHHHHHHHTTCEEEEEC----CSHHHHHHHHHHTCSEEECTTSCHHHHHHHH-TCCC-EEEEEESSCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCcEEEECCccHHHHHHHh-CCCC-ccEEEECCCchHHHH
Confidence            889999999999999999999998    5799999999999999999987666777777 4444 9999999998775 9


Q ss_pred             HHHhhccCCCeeC
Q 023007          276 KVLKFLRFREEQW  288 (288)
Q Consensus       276 ~a~~~l~~~G~~v  288 (288)
                      .++++|+++|++|
T Consensus       233 ~~~~~l~~~G~iv  245 (346)
T 3fbg_A          233 DMIQLVKPRGHIA  245 (346)
T ss_dssp             HHHHHEEEEEEEE
T ss_pred             HHHHHhccCCEEE
Confidence            9999999999984

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.8e-44  Score=324.85  Aligned_cols=242  Identities=39%  Similarity=0.595  Sum_probs=210.1

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCCCC--CCeEEEEEeEEecChHHHHHHhCCCCCCCCCC---------cccccceE
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVEVK--ENDVCVKMLAAPINPSDINRIEGVYPVRPKVP---------AVGGYEGV  114 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~--~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p---------~~~G~e~~  114 (288)
                      .+||++++++++.+.+.+++++.|.|++.  ++||+|||.++++|++|++.+.|.++....+|         .++|||++
T Consensus         2 ~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~   81 (364)
T 1gu7_A            2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (364)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeE
Confidence            47999999998864334778888877766  99999999999999999999998765433456         89999999


Q ss_pred             EEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCC-----------CCChhhhcccccchHHHHHHHHhh
Q 023007          115 GEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSK-----------DSPMEYAATIIVNPLTALRMLEDF  183 (288)
Q Consensus       115 G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~-----------~~~~~~aa~l~~~~~ta~~~l~~~  183 (288)
                      |+|+++|+++++|++||+|++.....|+|+||+++|.+.++++|+           ++++++|++++++++|||+++.+.
T Consensus        82 G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~  161 (364)
T 1gu7_A           82 FEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHY  161 (364)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSS
T ss_pred             EEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHh
Confidence            999999999999999999998865569999999999999999998           899999999999999999999987


Q ss_pred             cCCCCC-CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc----ccHHHHHHHh--
Q 023007          184 TTLNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ----LEVKNVKGLL--  256 (288)
Q Consensus       184 ~~~~~g-~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~----~~~~~i~~~~--  256 (288)
                      +++++| ++|||+|++|++|++++|+|+.+|++++++++.....++++++++++|+++++++++    ...+.+++++  
T Consensus       162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQ  241 (364)
T ss_dssp             SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHH
T ss_pred             hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhc
Confidence            899999 999999999999999999999999999999843211123467788999999999864    3457788887  


Q ss_pred             cCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          257 ANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      ++.+ +|+||||+|++....++++++++|+++
T Consensus       242 ~~~g-~Dvvid~~G~~~~~~~~~~l~~~G~~v  272 (364)
T 1gu7_A          242 SGGE-AKLALNCVGGKSSTGIARKLNNNGLML  272 (364)
T ss_dssp             HTCC-EEEEEESSCHHHHHHHHHTSCTTCEEE
T ss_pred             cCCC-ceEEEECCCchhHHHHHHHhccCCEEE
Confidence            5555 999999999988888899999999985

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.2e-44  Score=319.33  Aligned_cols=238  Identities=24%  Similarity=0.348  Sum_probs=215.0

Q ss_pred             CccceEEEEccCCCCCcceEE-EEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKM-IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~-~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      +.+||++++.+++.+ +.+++ ++.|.|+++++||+|||.++++|++|++++.|.++....+|.++|||++|+|+++|++
T Consensus        27 ~~~Mka~~~~~~g~~-~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~  105 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGP-EVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDN  105 (351)
T ss_dssp             -CEEEEEEESSCSSG-GGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTT
T ss_pred             cceEEEEEEccCCCc-ceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCC
Confidence            557999999988765 34888 7899999999999999999999999999999876544467899999999999999999


Q ss_pred             CCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      +++|++||+|++.....|+|+||+++|++.++++|+++++++|++++.++.|||+++.+.+++++|++|+|+|++|++|+
T Consensus       106 v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~  185 (351)
T 1yb5_A          106 ASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGL  185 (351)
T ss_dssp             CTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHH
T ss_pred             CCCCCCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHH
Confidence            99999999999987556999999999999999999999999999999999999999988899999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR  282 (288)
Q Consensus       204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~  282 (288)
                      +++|+++..|++|++++    .++++.+.++++|++.++++.+.. .+.+.+.+++.+ +|++|||+|++.++.++++++
T Consensus       186 ~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~-~D~vi~~~G~~~~~~~~~~l~  260 (351)
T 1yb5_A          186 AACQIARAYGLKILGTA----GTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKG-IDIIIEMLANVNLSKDLSLLS  260 (351)
T ss_dssp             HHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTC-EEEEEESCHHHHHHHHHHHEE
T ss_pred             HHHHHHHHCCCEEEEEe----CChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCC-cEEEEECCChHHHHHHHHhcc
Confidence            99999999999999998    578899999999999999987643 467777777655 999999999987799999999


Q ss_pred             CCCeeC
Q 023007          283 FREEQW  288 (288)
Q Consensus       283 ~~G~~v  288 (288)
                      ++|+++
T Consensus       261 ~~G~iv  266 (351)
T 1yb5_A          261 HGGRVI  266 (351)
T ss_dssp             EEEEEE
T ss_pred             CCCEEE
Confidence            999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=5.1e-44  Score=321.68  Aligned_cols=237  Identities=27%  Similarity=0.321  Sum_probs=211.0

Q ss_pred             CccceEEEEccCCC--CCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007           45 SPPSKAVVYEREGP--PDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        45 ~~~~~a~~~~~~g~--~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      +.+||++++++++.  ....+++++.|.|++.++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+
T Consensus        20 m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~   98 (363)
T 4dvj_A           20 FQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD-GTDWKVIGYDAAGIVSAVGP   98 (363)
T ss_dssp             CCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCCEEEEEEEECT
T ss_pred             hheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC-CCCCCcccceeEEEEEEeCC
Confidence            56799999998732  1244899999999999999999999999999999999887654 36789999999999999999


Q ss_pred             CCCCCCCCCEEEecC--CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCC-----CCCeEEEe
Q 023007          123 AVTRLAPGDWVIPSP--PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN-----SGDSIVQN  195 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~--~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-----~g~~vlI~  195 (288)
                      ++++|++||+|++..  ...|+|+||+++|++.++++|+++++++|++++++++|||+++.+.++++     +|++|||+
T Consensus        99 ~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~  178 (363)
T 4dvj_A           99 DVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIV  178 (363)
T ss_dssp             TCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEE
T ss_pred             CCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEE
Confidence            999999999999864  23699999999999999999999999999999999999999998888988     89999999


Q ss_pred             CCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCccc-
Q 023007          196 GATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS-  273 (288)
Q Consensus       196 g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~-  273 (288)
                      |++|++|++++|+|+. .|++|++++    .+++++++++++|+++++++++...+.++++ .+. ++|+||||+|++. 
T Consensus       179 Ga~G~vG~~a~qlak~~~g~~Vi~~~----~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~-~~~-g~Dvvid~~g~~~~  252 (363)
T 4dvj_A          179 GGAGGVGSIAVQIARQRTDLTVIATA----SRPETQEWVKSLGAHHVIDHSKPLAAEVAAL-GLG-APAFVFSTTHTDKH  252 (363)
T ss_dssp             STTSHHHHHHHHHHHHHCCSEEEEEC----SSHHHHHHHHHTTCSEEECTTSCHHHHHHTT-CSC-CEEEEEECSCHHHH
T ss_pred             CCCCHHHHHHHHHHHHhcCCEEEEEe----CCHHHHHHHHHcCCCEEEeCCCCHHHHHHHh-cCC-CceEEEECCCchhh
Confidence            9889999999999998 589999998    6799999999999999999987666777777 333 4999999999874 


Q ss_pred             HHHHHhhccCCCeeC
Q 023007          274 ASKVLKFLRFREEQW  288 (288)
Q Consensus       274 ~~~a~~~l~~~G~~v  288 (288)
                      ++.++++|+++|+++
T Consensus       253 ~~~~~~~l~~~G~iv  267 (363)
T 4dvj_A          253 AAEIADLIAPQGRFC  267 (363)
T ss_dssp             HHHHHHHSCTTCEEE
T ss_pred             HHHHHHHhcCCCEEE
Confidence            599999999999985

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=7.9e-44  Score=319.48  Aligned_cols=240  Identities=23%  Similarity=0.305  Sum_probs=213.9

Q ss_pred             cCCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEec
Q 023007           42 ALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        42 ~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G  121 (288)
                      ..++.+||++++.+++.++ .+++++.|.|+++++||+|||.+++||++|++.+.|.++..+.+|.++|||++|+|+++|
T Consensus        17 ~~~~~~Mka~~~~~~g~~~-~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG   95 (354)
T 2j8z_A           17 NLYFQSMLAVHFDKPGGPE-NLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELG   95 (354)
T ss_dssp             ----CEEEEEEESSCSSGG-GEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEEC
T ss_pred             ccchhheeEEEEccCCCcc-ceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEEC
Confidence            3457789999999988653 488999999999999999999999999999999998766544578999999999999999


Q ss_pred             CCC-CCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCCh
Q 023007          122 SAV-TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI  200 (288)
Q Consensus       122 ~~~-~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~  200 (288)
                      +++ ++|++||+|+++.. .|+|+||+++|++.++++|+++++++|++++.+++|||+++.+.+++++|++|+|+|++|+
T Consensus        96 ~~v~~~~~vGdrV~~~~~-~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~gg  174 (354)
T 2j8z_A           96 PGCQGHWKIGDTAMALLP-GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSG  174 (354)
T ss_dssp             SCC--CCCTTCEEEEECS-SCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSH
T ss_pred             CCcCCCCCCCCEEEEecC-CCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccH
Confidence            999 99999999998764 5999999999999999999999999999999999999999988899999999999999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHh
Q 023007          201 VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (288)
Q Consensus       201 vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~  279 (288)
                      +|++++|+++..|++|++++    .++++.+.++++|++.++|+.+. ..+.+.+.+++.+ +|++|||+|++.++.+++
T Consensus       175 iG~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~d~vi~~~G~~~~~~~~~  249 (354)
T 2j8z_A          175 VGTAAIQLTRMAGAIPLVTA----GSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAG-VNLILDCIGGSYWEKNVN  249 (354)
T ss_dssp             HHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSC-EEEEEESSCGGGHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCC-ceEEEECCCchHHHHHHH
Confidence            99999999999999999988    57899999999999999998764 3467777777655 999999999988899999


Q ss_pred             hccCCCeeC
Q 023007          280 FLRFREEQW  288 (288)
Q Consensus       280 ~l~~~G~~v  288 (288)
                      +|+++|+++
T Consensus       250 ~l~~~G~iv  258 (354)
T 2j8z_A          250 CLALDGRWV  258 (354)
T ss_dssp             HEEEEEEEE
T ss_pred             hccCCCEEE
Confidence            999999985

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.8e-44  Score=321.83  Aligned_cols=233  Identities=23%  Similarity=0.294  Sum_probs=204.7

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      .+||++++++++.++. +++++.|.|+++++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+++|++++
T Consensus         2 m~mka~~~~~~g~~~~-l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNK-LRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVK   80 (349)
T ss_dssp             CCEEEEEECSSSSGGG-EEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCC
T ss_pred             ceeEEEEEccCCCcce-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCC
Confidence            4799999999987643 899999999999999999999999999999999998766567899999999999999999999


Q ss_pred             CCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHH
Q 023007          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (288)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a  205 (288)
                      +|++||+|+++.. .|+|+||++++.+.++++|+++++++|++++++++|||+++.+.+++++|++|||+|++|++|+++
T Consensus        81 ~~~~GdrV~~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a  159 (349)
T 4a27_A           81 GYEIGDRVMAFVN-YNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAV  159 (349)
T ss_dssp             SCCTTCEEEEECS-SCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHH
T ss_pred             CCCCCCEEEEecC-CCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHH
Confidence            9999999999874 599999999999999999999999999999999999999998889999999999999999999999


Q ss_pred             HHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCC
Q 023007          206 IQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR  284 (288)
Q Consensus       206 ~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~  284 (288)
                      +|+|+.+| ++|+++.     ++++.+.++ +|++++++......+.+++++++  ++|++|||+|++.++.++++|+++
T Consensus       160 ~qla~~~g~~~V~~~~-----~~~~~~~~~-~ga~~~~~~~~~~~~~~~~~~~~--g~Dvv~d~~g~~~~~~~~~~l~~~  231 (349)
T 4a27_A          160 AQLCSTVPNVTVFGTA-----STFKHEAIK-DSVTHLFDRNADYVQEVKRISAE--GVDIVLDCLCGDNTGKGLSLLKPL  231 (349)
T ss_dssp             HHHHTTSTTCEEEEEE-----CGGGHHHHG-GGSSEEEETTSCHHHHHHHHCTT--CEEEEEEECC-------CTTEEEE
T ss_pred             HHHHHHcCCcEEEEeC-----CHHHHHHHH-cCCcEEEcCCccHHHHHHHhcCC--CceEEEECCCchhHHHHHHHhhcC
Confidence            99999995 6777776     456777887 99999999444556778887754  499999999998889999999999


Q ss_pred             CeeC
Q 023007          285 EEQW  288 (288)
Q Consensus       285 G~~v  288 (288)
                      |+++
T Consensus       232 G~~v  235 (349)
T 4a27_A          232 GTYI  235 (349)
T ss_dssp             EEEE
T ss_pred             CEEE
Confidence            9985

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.9e-43  Score=319.18  Aligned_cols=233  Identities=23%  Similarity=0.249  Sum_probs=208.5

Q ss_pred             CCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      ..|.+||++++.+++.+   +++++.|.|++.++||+|||.+++||++|++++.|.++  ..+|.++|||++|+|+++|+
T Consensus         5 ~~p~~mka~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~   79 (373)
T 1p0f_A            5 GKDITCKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGVVESIGA   79 (373)
T ss_dssp             TSCEEEEEEEBSSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEEEEEECT
T ss_pred             CCcceeEEEEEEcCCCC---eeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCcCceEEEEEECC
Confidence            45678999999998754   78889999999999999999999999999999988665  36789999999999999999


Q ss_pred             CCCCCCCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEE
Q 023007          123 AVTRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWH  155 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~  155 (288)
                      ++++|++||+|++.+.                                               ..|+|+||+++|++.++
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  159 (373)
T 1p0f_A           80 GVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVA  159 (373)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEE
T ss_pred             CCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEE
Confidence            9999999999997631                                               13899999999999999


Q ss_pred             EcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHH
Q 023007          156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK  234 (288)
Q Consensus       156 ~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~  234 (288)
                      ++|++++++ |++++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .+++++++++
T Consensus       160 ~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~a~  233 (373)
T 1p0f_A          160 KIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVG----THKDKFPKAI  233 (373)
T ss_dssp             EECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC----SCGGGHHHHH
T ss_pred             ECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC----CCHHHHHHHH
Confidence            999999999 99999999999999988899999999999997 9999999999999999 687776    5789999999


Q ss_pred             hCCCCEEEeCCc---ccHHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCC-CeeC
Q 023007          235 GLGADEVFTESQ---LEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFR-EEQW  288 (288)
Q Consensus       235 ~~g~~~v~~~~~---~~~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~-G~~v  288 (288)
                      ++|+++++++++   ...+.+++++++ + +|+||||+|+. .++.++++++++ |++|
T Consensus       234 ~lGa~~vi~~~~~~~~~~~~i~~~t~g-g-~Dvvid~~g~~~~~~~~~~~l~~~~G~iv  290 (373)
T 1p0f_A          234 ELGATECLNPKDYDKPIYEVICEKTNG-G-VDYAVECAGRIETMMNALQSTYCGSGVTV  290 (373)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHTTS-C-BSEEEECSCCHHHHHHHHHTBCTTTCEEE
T ss_pred             HcCCcEEEecccccchHHHHHHHHhCC-C-CCEEEECCCCHHHHHHHHHHHhcCCCEEE
Confidence            999999999874   345678888887 4 99999999985 459999999999 9985

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.6e-43  Score=319.44  Aligned_cols=231  Identities=22%  Similarity=0.288  Sum_probs=205.2

Q ss_pred             CCCccceEEEEccCCCCCcceEEE-EcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEec
Q 023007           43 LMSPPSKAVVYEREGPPDSVIKMI-ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~~~~~~~~-~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G  121 (288)
                      ++|.+||++++++++.    ++++ +.|.|++.++||+|||.+++||++|++++.+.    ...|.++|||++|+|+++|
T Consensus         7 ~~p~~mkA~v~~~~~~----l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~----~~~p~v~G~e~~G~V~~vG   78 (371)
T 3gqv_A            7 IPPPQQTALTVNDHDE----VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF----ATPWAFLGTDYAGTVVAVG   78 (371)
T ss_dssp             CCCSCEEEEEECTTSC----EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC---------CCTTSCCCSEEEEEEEEEC
T ss_pred             CCchhceeEEEcCCCc----eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC----CCCCccCccccEEEEEEeC
Confidence            4688999999999865    8998 99999999999999999999999999888663    2458999999999999999


Q ss_pred             CCCCCCCCCCEEEecCC-------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhh-cCC-------
Q 023007          122 SAVTRLAPGDWVIPSPP-------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF-TTL-------  186 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~~-------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~-~~~-------  186 (288)
                      +++++|++||+|++.+.       ..|+|+||+++|.+.++++|+++++++|+.+++++.|||+++.+. .++       
T Consensus        79 ~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~  158 (371)
T 3gqv_A           79 SDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQ  158 (371)
T ss_dssp             TTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSS
T ss_pred             CCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCcccc
Confidence            99999999999998863       269999999999999999999999999999999999999999887 553       


Q ss_pred             ----CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCC
Q 023007          187 ----NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPE  261 (288)
Q Consensus       187 ----~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~  261 (288)
                          ++|++|||+|++|++|++++|+|+.+|++|++++     +++++++++++|+++++|+++.+ .+.+++++++  +
T Consensus       159 ~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-----~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g--~  231 (371)
T 3gqv_A          159 PPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-----SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKN--N  231 (371)
T ss_dssp             CCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-----CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTT--C
T ss_pred             ccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-----CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccC--C
Confidence                8999999999999999999999999999999887     57889999999999999997754 4778888887  4


Q ss_pred             ccEEEECCCccc-HHHHHhhc-cCCCeeC
Q 023007          262 PALGFNCVGGNS-ASKVLKFL-RFREEQW  288 (288)
Q Consensus       262 ~D~v~d~~g~~~-~~~a~~~l-~~~G~~v  288 (288)
                      +|++|||+|++. ++.++++| +++|+++
T Consensus       232 ~d~v~d~~g~~~~~~~~~~~l~~~~G~iv  260 (371)
T 3gqv_A          232 LRYALDCITNVESTTFCFAAIGRAGGHYV  260 (371)
T ss_dssp             CCEEEESSCSHHHHHHHHHHSCTTCEEEE
T ss_pred             ccEEEECCCchHHHHHHHHHhhcCCCEEE
Confidence            999999999965 59999999 5999985

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=2.7e-43  Score=314.99  Aligned_cols=231  Identities=23%  Similarity=0.266  Sum_probs=210.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC-CCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-RPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||++++++++++   +++++.|.|++.++||+|||.++++|++|++.+.|.++. ...+|.++|||++|+|+++|+++++
T Consensus         1 MkA~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   77 (345)
T 3jv7_A            1 MKAVQYTEIGSE---PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTG   77 (345)
T ss_dssp             CEEEEECSTTSC---CEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCS
T ss_pred             CeEEEEcCCCCc---eEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCC
Confidence            799999999875   789999999999999999999999999999999987542 2367899999999999999999999


Q ss_pred             CCCCCEEEecCC-------------------------------CCcccceEEEee-CCcEEEcCCCCChhhhcccccchH
Q 023007          127 LAPGDWVIPSPP-------------------------------SSGTWQSYVVKD-QSVWHKVSKDSPMEYAATIIVNPL  174 (288)
Q Consensus       127 ~~~Gd~V~~~~~-------------------------------~~G~~a~~~~~~-~~~l~~ip~~~~~~~aa~l~~~~~  174 (288)
                      |++||+|++.+.                               ..|+|+||+++| .+.++++|+ +++++|+.++.+++
T Consensus        78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~  156 (345)
T 3jv7_A           78 FGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGL  156 (345)
T ss_dssp             CCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTH
T ss_pred             CCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHH
Confidence            999999998531                               269999999999 999999999 99999999999999


Q ss_pred             HHHHHHHh-hcCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHH
Q 023007          175 TALRMLED-FTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNV  252 (288)
Q Consensus       175 ta~~~l~~-~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i  252 (288)
                      |||+++.+ ..++++|++|+|+|+ |++|++++|+|+.+ |++|+++.    .+++++++++++|+++++++++...+.+
T Consensus       157 ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~----~~~~~~~~~~~lGa~~~i~~~~~~~~~v  231 (345)
T 3jv7_A          157 TPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVD----LDDDRLALAREVGADAAVKSGAGAADAI  231 (345)
T ss_dssp             HHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEE----SCHHHHHHHHHTTCSEEEECSTTHHHHH
T ss_pred             HHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHcCCCEEEcCCCcHHHHH
Confidence            99999988 568999999999998 99999999999999 67888887    6899999999999999999987667889


Q ss_pred             HHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      ++++++.+ +|++|||+|++ .++.++++|+++|+++
T Consensus       232 ~~~t~g~g-~d~v~d~~G~~~~~~~~~~~l~~~G~iv  267 (345)
T 3jv7_A          232 RELTGGQG-ATAVFDFVGAQSTIDTAQQVVAVDGHIS  267 (345)
T ss_dssp             HHHHGGGC-EEEEEESSCCHHHHHHHHHHEEEEEEEE
T ss_pred             HHHhCCCC-CeEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            99998876 99999999998 5599999999999985

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.2e-44  Score=319.96  Aligned_cols=240  Identities=23%  Similarity=0.268  Sum_probs=204.4

Q ss_pred             hhhccCC-CccceEEEEccCCCCCcceEEEEcCCCC-CCCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccce
Q 023007           38 RAFSALM-SPPSKAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEG  113 (288)
Q Consensus        38 ~~~~~~~-~~~~~a~~~~~~g~~~~~~~~~~~~~p~-~~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~  113 (288)
                      +++++.+ +.+||++++++++.+   +++++.|.|+ +.++||+|||.++++|++|++.+.|.++.  ...+|.++|||+
T Consensus         5 ~~~~~~~~~~~mka~~~~~~g~~---l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~   81 (359)
T 1h2b_A            5 QDFSQSLGVERLKAARLHEYNKP---LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHEN   81 (359)
T ss_dssp             ------------CEEEESSTTSC---CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCE
T ss_pred             hhhhhcCChhhceEEEEecCCCC---cEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCc
Confidence            3444333 568999999998753   7889999999 99999999999999999999999986541  225689999999


Q ss_pred             EEEEEEecCCCCCCCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhc
Q 023007          114 VGEVYSVGSAVTRLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAA  167 (288)
Q Consensus       114 ~G~V~~~G~~~~~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa  167 (288)
                      +|+|+++|+++++|++||+|+++..                          ..|+|+||+++|++.++++|+++++++|+
T Consensus        82 ~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  161 (359)
T 1h2b_A           82 VGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLV  161 (359)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHH
T ss_pred             eEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHh
Confidence            9999999999999999999987642                          25999999999999999999999999998


Q ss_pred             ---ccccchHHHHHHHHhh-cCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEE
Q 023007          168 ---TIIVNPLTALRMLEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (288)
Q Consensus       168 ---~l~~~~~ta~~~l~~~-~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~  242 (288)
                         .++++++|||+++.+. +++++|++|||+|+ |++|++++|+|+.+ |++|++++    .+++++++++++|+++++
T Consensus       162 ~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~vi  236 (359)
T 1h2b_A          162 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALD----VKEEKLKLAERLGADHVV  236 (359)
T ss_dssp             HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEE----SSHHHHHHHHHTTCSEEE
T ss_pred             hccchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHhCCCEEE
Confidence               7888899999999877 89999999999999 99999999999999 99999988    689999999999999999


Q ss_pred             eCCcccHHHHHHHhcCCCCccEEEECCCcc---cHHHHHhhccCCCeeC
Q 023007          243 TESQLEVKNVKGLLANLPEPALGFNCVGGN---SASKVLKFLRFREEQW  288 (288)
Q Consensus       243 ~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~---~~~~a~~~l~~~G~~v  288 (288)
                      |+++...+.+++++++.+ +|++|||+|++   .++.++++  ++|+++
T Consensus       237 ~~~~~~~~~v~~~~~g~g-~Dvvid~~G~~~~~~~~~~~~~--~~G~~v  282 (359)
T 1h2b_A          237 DARRDPVKQVMELTRGRG-VNVAMDFVGSQATVDYTPYLLG--RMGRLI  282 (359)
T ss_dssp             ETTSCHHHHHHHHTTTCC-EEEEEESSCCHHHHHHGGGGEE--EEEEEE
T ss_pred             eccchHHHHHHHHhCCCC-CcEEEECCCCchHHHHHHHhhc--CCCEEE
Confidence            987664467888887765 99999999998   55788887  888874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=6.8e-44  Score=315.82  Aligned_cols=230  Identities=25%  Similarity=0.376  Sum_probs=204.4

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCC----CCCCCCCcccccceEEEEEEec
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY----PVRPKVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~----~~~~~~p~~~G~e~~G~V~~~G  121 (288)
                      .+||++++++++.++ .+++++.|.|+++++||+|||.++++|++|++.+.|..    .....+|.++|||++|+|+++|
T Consensus         5 ~~Mka~~~~~~g~~~-~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            5 KEMKAIQFDQFGPPK-VLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             CEEEEEEESSSCSGG-GEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             ccceEEEEccCCCcc-eeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            479999999988763 58999999999999999999999999999999988831    0123568999999999999999


Q ss_pred             CCCCCCCCCCEEEecC---CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCC
Q 023007          122 SAVTRLAPGDWVIPSP---PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGAT  198 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~---~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  198 (288)
                      +++++|++||+|++..   ...|+|+||++++.+.++++|+++++++|++++++++|||+++ +.+++++|++|||+|++
T Consensus        84 ~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~  162 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGA  162 (321)
T ss_dssp             TTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTT
T ss_pred             CCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCC
Confidence            9999999999999876   2369999999999999999999999999999999999999999 66999999999999988


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHH
Q 023007          199 SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKV  277 (288)
Q Consensus       199 g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a  277 (288)
                      |++|++++|+|+.+|++|++++     +++++++++++|+++++|+++.+ ..   +..  . ++|++|||+|++..+.+
T Consensus       163 G~vG~~a~q~a~~~Ga~vi~~~-----~~~~~~~~~~lGa~~~i~~~~~~~~~---~~~--~-g~D~v~d~~g~~~~~~~  231 (321)
T 3tqh_A          163 GGVGHLAIQLAKQKGTTVITTA-----SKRNHAFLKALGAEQCINYHEEDFLL---AIS--T-PVDAVIDLVGGDVGIQS  231 (321)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEE-----CHHHHHHHHHHTCSEEEETTTSCHHH---HCC--S-CEEEEEESSCHHHHHHH
T ss_pred             cHHHHHHHHHHHHcCCEEEEEe-----ccchHHHHHHcCCCEEEeCCCcchhh---hhc--c-CCCEEEECCCcHHHHHH
Confidence            9999999999999999999887     56678999999999999988754 22   211  2 39999999999888999


Q ss_pred             HhhccCCCeeC
Q 023007          278 LKFLRFREEQW  288 (288)
Q Consensus       278 ~~~l~~~G~~v  288 (288)
                      +++++++|+++
T Consensus       232 ~~~l~~~G~iv  242 (321)
T 3tqh_A          232 IDCLKETGCIV  242 (321)
T ss_dssp             GGGEEEEEEEE
T ss_pred             HHhccCCCEEE
Confidence            99999999985

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=3.7e-43  Score=317.63  Aligned_cols=234  Identities=22%  Similarity=0.256  Sum_probs=208.2

Q ss_pred             CCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      ..|.+||++++.+++.+   +++++.|.|++.++||+|||.+++||++|++++.|. +. ..+|.++|||++|+|+++|+
T Consensus         4 ~~p~~mka~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~-~~~P~v~GhE~~G~V~~vG~   78 (376)
T 1e3i_A            4 GKVIKCKAAIAWKTGSP---LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KK-ALFPVVLGHECAGIVESVGP   78 (376)
T ss_dssp             TSCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SC-CCSSBCCCCEEEEEEEEECT
T ss_pred             CCChheeEEEEecCCCC---eEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CC-CCCCcccCccccEEEEEECC
Confidence            45678999999998754   788899999999999999999999999999998875 32 35789999999999999999


Q ss_pred             CCCCCCCCCEEEecCC---------------------------------------------------CCcccceEEEeeC
Q 023007          123 AVTRLAPGDWVIPSPP---------------------------------------------------SSGTWQSYVVKDQ  151 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~---------------------------------------------------~~G~~a~~~~~~~  151 (288)
                      ++++|++||+|++.+.                                                   ..|+|+||+++|+
T Consensus        79 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  158 (376)
T 1e3i_A           79 GVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSE  158 (376)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred             CCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEecc
Confidence            9999999999997531                                                   1389999999999


Q ss_pred             CcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHH
Q 023007          152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAK  230 (288)
Q Consensus       152 ~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~  230 (288)
                      +.++++|+++++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .+++++
T Consensus       159 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~  233 (376)
T 1e3i_A          159 ANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAID----INGEKF  233 (376)
T ss_dssp             GGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCGGGH
T ss_pred             ccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHH
Confidence            9999999999999999999999999999988899999999999997 9999999999999999 787776    578999


Q ss_pred             HHHHhCCCCEEEeCCc---ccHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007          231 EKLKGLGADEVFTESQ---LEVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW  288 (288)
Q Consensus       231 ~~~~~~g~~~v~~~~~---~~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v  288 (288)
                      ++++++|+++++|+++   ...+.+++++++ + +|+||||+|+.. ++.++++++++ |++|
T Consensus       234 ~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~-g-~Dvvid~~G~~~~~~~~~~~l~~~~G~iv  294 (376)
T 1e3i_A          234 PKAKALGATDCLNPRELDKPVQDVITELTAG-G-VDYSLDCAGTAQTLKAAVDCTVLGWGSCT  294 (376)
T ss_dssp             HHHHHTTCSEEECGGGCSSCHHHHHHHHHTS-C-BSEEEESSCCHHHHHHHHHTBCTTTCEEE
T ss_pred             HHHHHhCCcEEEccccccchHHHHHHHHhCC-C-ccEEEECCCCHHHHHHHHHHhhcCCCEEE
Confidence            9999999999999874   345678888877 4 999999999854 59999999999 9985

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=5.8e-43  Score=312.23  Aligned_cols=230  Identities=24%  Similarity=0.304  Sum_probs=206.6

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      +||++++++++.+   +++++.|.|++.++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+++|+++++
T Consensus         2 ~MkA~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~   78 (340)
T 3s2e_A            2 MMKAAVVRAFGAP---LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSR   78 (340)
T ss_dssp             EEEEEEBCSTTSC---CEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCS
T ss_pred             ceEEEEEecCCCC---CEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCc
Confidence            6899999998765   8899999999999999999999999999999999987765578999999999999999999999


Q ss_pred             CCCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007          127 LAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (288)
Q Consensus       127 ~~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~  179 (288)
                      |++||+|+...                           ...|+|+||+++|++.++++|+++++++|+.+++++.|||++
T Consensus        79 ~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  158 (340)
T 3s2e_A           79 VKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKG  158 (340)
T ss_dssp             CCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHH
T ss_pred             CCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHH
Confidence            99999994311                           125999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcC
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLAN  258 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~  258 (288)
                      +. ..++++|++|||+|+ |++|++++|+|+.+|++|+++.    .+++++++++++|+++++|+++.+ .+.+.+ +.+
T Consensus       159 l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~-~~g  231 (340)
T 3s2e_A          159 LK-VTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVD----IDDAKLNLARRLGAEVAVNARDTDPAAWLQK-EIG  231 (340)
T ss_dssp             HH-TTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTCSEEEETTTSCHHHHHHH-HHS
T ss_pred             HH-HcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHHcCCCEEEeCCCcCHHHHHHH-hCC
Confidence            95 579999999999998 9999999999999999999998    689999999999999999998754 456666 555


Q ss_pred             CCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                        ++|++|||+|+... +.++++|+++|+++
T Consensus       232 --~~d~vid~~g~~~~~~~~~~~l~~~G~iv  260 (340)
T 3s2e_A          232 --GAHGVLVTAVSPKAFSQAIGMVRRGGTIA  260 (340)
T ss_dssp             --SEEEEEESSCCHHHHHHHHHHEEEEEEEE
T ss_pred             --CCCEEEEeCCCHHHHHHHHHHhccCCEEE
Confidence              39999999987554 99999999999985

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=4e-44  Score=320.85  Aligned_cols=239  Identities=24%  Similarity=0.339  Sum_probs=208.7

Q ss_pred             CCCccceEEEEc--cCCCCCcceEEEEc---------CCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCccccc
Q 023007           43 LMSPPSKAVVYE--REGPPDSVIKMIEL---------PPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGY  111 (288)
Q Consensus        43 ~~~~~~~a~~~~--~~g~~~~~~~~~~~---------~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~  111 (288)
                      ++|.+||+++++  +++.+.+.+++++.         |.|++.++||+|||.+++||++|++.+.|.++....+|.++||
T Consensus         6 ~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~   85 (349)
T 3pi7_A            6 TIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGF   85 (349)
T ss_dssp             CCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCS
T ss_pred             CCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccc
Confidence            467889999999  54322233666777         9999999999999999999999999999987665578999999


Q ss_pred             ceEEEEEEecCCC-CCCCCCCEEEecC--CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCC
Q 023007          112 EGVGEVYSVGSAV-TRLAPGDWVIPSP--PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNS  188 (288)
Q Consensus       112 e~~G~V~~~G~~~-~~~~~Gd~V~~~~--~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  188 (288)
                      |++|+|+++|+++ ++|++||+|++..  ...|+|+||+++|++.++++|+++++++|+++++.++|||+++.. ++ ++
T Consensus        86 E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~-~~-~~  163 (349)
T 3pi7_A           86 EGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDI-VK-QE  163 (349)
T ss_dssp             EEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHH-HH-HH
T ss_pred             eEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHHH-Hh-hC
Confidence            9999999999999 9999999999875  236999999999999999999999999999999999999976654 55 66


Q ss_pred             C-CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEE
Q 023007          189 G-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGF  266 (288)
Q Consensus       189 g-~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~  266 (288)
                      | ++|+|+|++|++|++++|+|+..|++|++++    .+++++++++++|+++++|+++.+ .+.+++++++.+ +|++|
T Consensus       164 g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g-~D~vi  238 (349)
T 3pi7_A          164 GEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTV----RRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQ-PRIFL  238 (349)
T ss_dssp             CCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEE----SCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHC-CCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCC-CcEEE
Confidence            6 7999999999999999999999999999998    578899999999999999987654 567888887655 99999


Q ss_pred             ECCCcccHHHHHhhccCCCeeC
Q 023007          267 NCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       267 d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      ||+|++.++.++++|+++|+++
T Consensus       239 d~~g~~~~~~~~~~l~~~G~iv  260 (349)
T 3pi7_A          239 DAVTGPLASAIFNAMPKRARWI  260 (349)
T ss_dssp             ESSCHHHHHHHHHHSCTTCEEE
T ss_pred             ECCCChhHHHHHhhhcCCCEEE
Confidence            9999998899999999999985

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1e-42  Score=314.48  Aligned_cols=234  Identities=24%  Similarity=0.264  Sum_probs=208.5

Q ss_pred             CCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      ..|.+||++++++++.+   +++++.|.|++.++||+|||.+++||++|++++.|.++.  .+|.++|||++|+|+++|+
T Consensus         4 ~~~~~mkA~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~P~v~GhE~~G~V~~vG~   78 (374)
T 2jhf_A            4 GKVIKCKAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVESIGE   78 (374)
T ss_dssp             TSCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEEEECT
T ss_pred             CCceeEEEEEEecCCCc---eEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC--CCCcccCcCceEEEEEECC
Confidence            34678999999998754   788899999999999999999999999999999987653  3689999999999999999


Q ss_pred             CCCCCCCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEE
Q 023007          123 AVTRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWH  155 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~  155 (288)
                      ++++|++||+|++.+.                                               ..|+|+||+++|++.++
T Consensus        79 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  158 (374)
T 2jhf_A           79 GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVA  158 (374)
T ss_dssp             TCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEE
T ss_pred             CCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeE
Confidence            9999999999997531                                               13899999999999999


Q ss_pred             EcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHH
Q 023007          156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK  234 (288)
Q Consensus       156 ~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~  234 (288)
                      ++|+++++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .+++++++++
T Consensus       159 ~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~----~~~~~~~~~~  233 (374)
T 2jhf_A          159 KIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVD----INKDKFAKAK  233 (374)
T ss_dssp             ECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCGGGHHHHH
T ss_pred             ECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHH
Confidence            999999999999999999999999988899999999999996 9999999999999999 687776    5789999999


Q ss_pred             hCCCCEEEeCCc---ccHHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCC-CeeC
Q 023007          235 GLGADEVFTESQ---LEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFR-EEQW  288 (288)
Q Consensus       235 ~~g~~~v~~~~~---~~~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~-G~~v  288 (288)
                      ++|+++++|+++   ...+.+.+++++ + +|+||||+|+. .++.++++++++ |++|
T Consensus       234 ~lGa~~vi~~~~~~~~~~~~~~~~~~~-g-~D~vid~~g~~~~~~~~~~~l~~~~G~iv  290 (374)
T 2jhf_A          234 EVGATECVNPQDYKKPIQEVLTEMSNG-G-VDFSFEVIGRLDTMVTALSCCQEAYGVSV  290 (374)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHTTS-C-BSEEEECSCCHHHHHHHHHHBCTTTCEEE
T ss_pred             HhCCceEecccccchhHHHHHHHHhCC-C-CcEEEECCCCHHHHHHHHHHhhcCCcEEE
Confidence            999999999874   245678888876 4 99999999985 459999999999 9985

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=7.7e-43  Score=315.19  Aligned_cols=234  Identities=22%  Similarity=0.260  Sum_probs=208.9

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      .|.+||++++.+++.+   +++++.|.|++.++||+|||.+++||++|++++.|.++. ..+|.++|||++|+|+++|++
T Consensus         3 ~p~~mkA~~~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~   78 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVESVGEG   78 (373)
T ss_dssp             CCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT-CCSSBCCCCEEEEEEEEECTT
T ss_pred             CccceEEEEEecCCCC---cEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCC-CCCCccccccccEEEEEECCC
Confidence            4668999999998754   788899999999999999999999999999999987553 357899999999999999999


Q ss_pred             CCCCCCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEEE
Q 023007          124 VTRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWHK  156 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~~  156 (288)
                      +++|++||+|++.+.                                               ..|+|+||+++|++.+++
T Consensus        79 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  158 (373)
T 2fzw_A           79 VTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAK  158 (373)
T ss_dssp             CCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEE
Confidence            999999999997631                                               138999999999999999


Q ss_pred             cCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHh
Q 023007          157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG  235 (288)
Q Consensus       157 ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~  235 (288)
                      +|+++++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .++++++++++
T Consensus       159 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~----~~~~~~~~~~~  233 (373)
T 2fzw_A          159 IDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVD----INKDKFARAKE  233 (373)
T ss_dssp             CCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC----SCGGGHHHHHH
T ss_pred             CCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHH
Confidence            99999999999999999999999988899999999999997 9999999999999999 687776    57899999999


Q ss_pred             CCCCEEEeCCc---ccHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC-CeeC
Q 023007          236 LGADEVFTESQ---LEVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR-EEQW  288 (288)
Q Consensus       236 ~g~~~v~~~~~---~~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~-G~~v  288 (288)
                      +|+++++++++   ...+.+++++++ + +|++|||+|+.. ++.++++++++ |++|
T Consensus       234 lGa~~vi~~~~~~~~~~~~v~~~~~~-g-~D~vid~~g~~~~~~~~~~~l~~~~G~iv  289 (373)
T 2fzw_A          234 FGATECINPQDFSKPIQEVLIEMTDG-G-VDYSFECIGNVKVMRAALEACHKGWGVSV  289 (373)
T ss_dssp             HTCSEEECGGGCSSCHHHHHHHHTTS-C-BSEEEECSCCHHHHHHHHHTBCTTTCEEE
T ss_pred             cCCceEeccccccccHHHHHHHHhCC-C-CCEEEECCCcHHHHHHHHHhhccCCcEEE
Confidence            99999999874   245678888876 4 999999999854 59999999999 9985

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1e-42  Score=314.42  Aligned_cols=233  Identities=21%  Similarity=0.259  Sum_probs=208.1

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHH-HHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDIN-RIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      .|.+||++++.+++.+   +++++.|.|++.++||+|||.+++||++|++ .+.|.++  ..+|.++|||++|+|+++|+
T Consensus         5 ~~~~mka~~~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~   79 (374)
T 1cdo_A            5 KVIKCKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHEGAGIVESVGP   79 (374)
T ss_dssp             SCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCCEEEEEEEECT
T ss_pred             CcceeEEEEEecCCCC---eEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCccceEEEEEECC
Confidence            4668999999998754   7888999999999999999999999999999 8888655  35789999999999999999


Q ss_pred             CCCCCCCCCEEEecCC-----------------------------------------------CCcccceEEEeeCCcEE
Q 023007          123 AVTRLAPGDWVIPSPP-----------------------------------------------SSGTWQSYVVKDQSVWH  155 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~-----------------------------------------------~~G~~a~~~~~~~~~l~  155 (288)
                      ++++|++||+|++.+.                                               ..|+|+||+++|++.++
T Consensus        80 ~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  159 (374)
T 1cdo_A           80 GVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVA  159 (374)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEE
T ss_pred             CCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheE
Confidence            9999999999997631                                               13899999999999999


Q ss_pred             EcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHH
Q 023007          156 KVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK  234 (288)
Q Consensus       156 ~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~  234 (288)
                      ++|+++++++|+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .+++++++++
T Consensus       160 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~----~~~~~~~~~~  234 (374)
T 1cdo_A          160 KIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVD----LNPDKFEKAK  234 (374)
T ss_dssp             ECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCGGGHHHHH
T ss_pred             ECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHH
Confidence            999999999999999999999999988899999999999997 9999999999999999 788876    5889999999


Q ss_pred             hCCCCEEEeCCc---ccHHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCC-CeeC
Q 023007          235 GLGADEVFTESQ---LEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFR-EEQW  288 (288)
Q Consensus       235 ~~g~~~v~~~~~---~~~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~-G~~v  288 (288)
                      ++|+++++++++   ...+.+++++++ + +|++|||+|+. .++.++++++++ |++|
T Consensus       235 ~lGa~~vi~~~~~~~~~~~~~~~~~~~-g-~D~vid~~g~~~~~~~~~~~l~~~~G~iv  291 (374)
T 1cdo_A          235 VFGATDFVNPNDHSEPISQVLSKMTNG-G-VDFSLECVGNVGVMRNALESCLKGWGVSV  291 (374)
T ss_dssp             HTTCCEEECGGGCSSCHHHHHHHHHTS-C-BSEEEECSCCHHHHHHHHHTBCTTTCEEE
T ss_pred             HhCCceEEeccccchhHHHHHHHHhCC-C-CCEEEECCCCHHHHHHHHHHhhcCCcEEE
Confidence            999999999874   245678888876 4 99999999985 459999999999 9985

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=3.8e-43  Score=316.79  Aligned_cols=233  Identities=21%  Similarity=0.286  Sum_probs=204.9

Q ss_pred             ccCCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEe
Q 023007           41 SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (288)
Q Consensus        41 ~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~  120 (288)
                      ...+|.+||++++++++.    +++++.|.|++.++||+|||.+++||++|++.+.|.++.  .+|.++|||++|+|+++
T Consensus        17 ~~~~p~~mkA~v~~~~~~----l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~p~v~G~e~~G~V~~v   90 (370)
T 4ej6_A           17 NLYFQSMMKAVRLESVGN----ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPS--TPPVTLGHEFCGIVVEA   90 (370)
T ss_dssp             ----CCEEEEEEEEETTE----EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSEECCCSEEEEEEEE
T ss_pred             ccccchheEEEEEecCCc----eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCCC--CCCeecCcceEEEEEEE
Confidence            446788999999999865    899999999999999999999999999999999987643  66899999999999999


Q ss_pred             cCCCCCCCCCCEEEecC--------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchH
Q 023007          121 GSAVTRLAPGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL  174 (288)
Q Consensus       121 G~~~~~~~~Gd~V~~~~--------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~  174 (288)
                      |+++++|++||+|++.+                          ...|+|+||+++|.+.++++|+++++++|+ ++.++.
T Consensus        91 G~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~  169 (370)
T 4ej6_A           91 GSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLA  169 (370)
T ss_dssp             CTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHH
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHH
Confidence            99999999999999743                          126999999999999999999999999998 566899


Q ss_pred             HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHH
Q 023007          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNV  252 (288)
Q Consensus       175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i  252 (288)
                      |||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .++++.++++++|+++++|+++.+ .+.+
T Consensus       170 ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~~~~~~i  243 (370)
T 4ej6_A          170 CCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILST----RQATKRRLAEEVGATATVDPSAGDVVEAI  243 (370)
T ss_dssp             HHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCHHHHHHHHHHTCSEEECTTSSCHHHHH
T ss_pred             HHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHcCCCEEECCCCcCHHHHH
Confidence            999999 5699999999999998 9999999999999999 677776    589999999999999999987654 4667


Q ss_pred             HH---HhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          253 KG---LLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~---~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      ++   ++++ | +|+||||+|+.. ++.++++|+++|+++
T Consensus       244 ~~~~~~~~g-g-~Dvvid~~G~~~~~~~~~~~l~~~G~vv  281 (370)
T 4ej6_A          244 AGPVGLVPG-G-VDVVIECAGVAETVKQSTRLAKAGGTVV  281 (370)
T ss_dssp             HSTTSSSTT-C-EEEEEECSCCHHHHHHHHHHEEEEEEEE
T ss_pred             HhhhhccCC-C-CCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence            76   6666 4 999999999754 599999999999985

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.2e-43  Score=314.54  Aligned_cols=228  Identities=21%  Similarity=0.226  Sum_probs=205.8

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHH-HHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDIN-RIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||+++++++++    +++++.|.|++.++||+|||.++++|++|++ ++.|.++.  .+|.++|||++|+|+++|+++++
T Consensus         1 MkA~~~~~~~~----~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~--~~p~v~G~E~~G~V~~vG~~v~~   74 (352)
T 3fpc_A            1 MKGFAMLSIGK----VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE--RHNMILGHEAVGEVVEVGSEVKD   74 (352)
T ss_dssp             CEEEEEEETTE----EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC--CSSEECCCEEEEEEEEECTTCCS
T ss_pred             CeEEEEccCCC----ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC--CCCcccCCcceEEEEEECCCCCc
Confidence            79999999987    7899999999999999999999999999999 55776654  56899999999999999999999


Q ss_pred             CCCCCEEEecC-----------------------------CCCcccceEEEeeCC--cEEEcCCCCChhhhcccccchHH
Q 023007          127 LAPGDWVIPSP-----------------------------PSSGTWQSYVVKDQS--VWHKVSKDSPMEYAATIIVNPLT  175 (288)
Q Consensus       127 ~~~Gd~V~~~~-----------------------------~~~G~~a~~~~~~~~--~l~~ip~~~~~~~aa~l~~~~~t  175 (288)
                      |++||+|++.+                             ...|+|+||++++..  .++++|+++++++|+.++.++.|
T Consensus        75 ~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~t  154 (352)
T 3fpc_A           75 FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTT  154 (352)
T ss_dssp             CCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHH
T ss_pred             CCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHH
Confidence            99999999632                             126999999999976  89999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHH
Q 023007          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVK  253 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~  253 (288)
                      ||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .+++++++++++|+++++++++.+ .+.++
T Consensus       155 a~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~  228 (352)
T 3fpc_A          155 GFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVG----SRKHCCDIALEYGATDIINYKNGDIVEQIL  228 (352)
T ss_dssp             HHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEEC----CCHHHHHHHHHHTCCEEECGGGSCHHHHHH
T ss_pred             HHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEC----CCHHHHHHHHHhCCceEEcCCCcCHHHHHH
Confidence            99999 5699999999999997 9999999999999999 788876    578999999999999999987654 57888


Q ss_pred             HHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +++++.+ +|++|||+|++. ++.++++|+++|+++
T Consensus       229 ~~t~g~g-~D~v~d~~g~~~~~~~~~~~l~~~G~~v  263 (352)
T 3fpc_A          229 KATDGKG-VDKVVIAGGDVHTFAQAVKMIKPGSDIG  263 (352)
T ss_dssp             HHTTTCC-EEEEEECSSCTTHHHHHHHHEEEEEEEE
T ss_pred             HHcCCCC-CCEEEECCCChHHHHHHHHHHhcCCEEE
Confidence            9998876 999999999954 599999999999985

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.3e-43  Score=314.74  Aligned_cols=232  Identities=23%  Similarity=0.263  Sum_probs=207.5

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      +.+||++++++++.+   +++++.|.|++.++||+|||.+++||++|++++.|.++  ..+|.++|||++|+|+++|+++
T Consensus         4 ~~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~v   78 (371)
T 1f8f_A            4 LKDIIAAVTPCKGAD---FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGSGIIEAIGPNV   78 (371)
T ss_dssp             CEEEEEEEBCSTTCC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEEEEEEEECTTC
T ss_pred             cccceEEEEcCCCCC---eEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC--CCCCcccCcccceEEEEeCCCC
Confidence            346999999998754   78899999999999999999999999999999998665  2568999999999999999999


Q ss_pred             CCCCCCCEEEecC------------------------------------------------CCCcccceEEEeeCCcEEE
Q 023007          125 TRLAPGDWVIPSP------------------------------------------------PSSGTWQSYVVKDQSVWHK  156 (288)
Q Consensus       125 ~~~~~Gd~V~~~~------------------------------------------------~~~G~~a~~~~~~~~~l~~  156 (288)
                      ++|++||+|++.+                                                ...|+|+||+++|++.+++
T Consensus        79 ~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~  158 (371)
T 1f8f_A           79 TELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVK  158 (371)
T ss_dssp             CSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEE
Confidence            9999999998632                                                0138999999999999999


Q ss_pred             cCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHh
Q 023007          157 VSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG  235 (288)
Q Consensus       157 ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~  235 (288)
                      +|+++++++|+.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .++++++++++
T Consensus       159 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~----~~~~~~~~a~~  233 (371)
T 1f8f_A          159 VTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVD----IVESRLELAKQ  233 (371)
T ss_dssp             ECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEE----SCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC----CCHHHHHHHHH
Confidence            99999999999999999999999988899999999999997 9999999999999999 577777    58999999999


Q ss_pred             CCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          236 LGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       236 ~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +|+++++++++.+ .+.+++++++ + +|+||||+|+.. ++.++++|+++|+++
T Consensus       234 lGa~~vi~~~~~~~~~~~~~~~~g-g-~D~vid~~g~~~~~~~~~~~l~~~G~iv  286 (371)
T 1f8f_A          234 LGATHVINSKTQDPVAAIKEITDG-G-VNFALESTGSPEILKQGVDALGILGKIA  286 (371)
T ss_dssp             HTCSEEEETTTSCHHHHHHHHTTS-C-EEEEEECSCCHHHHHHHHHTEEEEEEEE
T ss_pred             cCCCEEecCCccCHHHHHHHhcCC-C-CcEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            9999999987654 5678888887 5 999999999854 599999999999985

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=9.4e-43  Score=310.00  Aligned_cols=235  Identities=23%  Similarity=0.311  Sum_probs=207.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCC-CCC-CCCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-PVR-PKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~-~~~-~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      ||++++++++.+. .+++++.|.|++.++||+|||.++++|++|++++.|.+ +.. ..+|.++|||++|+|+++|++++
T Consensus         2 Mka~~~~~~g~~~-~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~   80 (333)
T 1wly_A            2 VMAAVIHKKGGPD-NFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT   80 (333)
T ss_dssp             CEEEEESSCSSGG-GEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred             cEEEEEcccCCcc-eeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence            7999999988653 48999999999999999999999999999999998865 211 35789999999999999999999


Q ss_pred             CCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhh--hcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY--AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~--aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      +|++||+|+......|+|+||+++|++.++++|+++++++  |++++.+++|||+++.+.+++++|++|+|+|++|++|+
T Consensus        81 ~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~  160 (333)
T 1wly_A           81 DFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGH  160 (333)
T ss_dssp             SCCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHH
T ss_pred             CCCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHH
Confidence            9999999987653258999999999999999999999999  99999999999999988899999999999999999999


Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhcc
Q 023007          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLR  282 (288)
Q Consensus       204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~  282 (288)
                      +++|+++..|++|+++.    .++++.+.++++|++.++++.+.. .+.+.+.+++.+ +|++|||+|+..++.++++++
T Consensus       161 ~~~~~a~~~G~~Vi~~~----~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~-~d~vi~~~g~~~~~~~~~~l~  235 (333)
T 1wly_A          161 IMVPWARHLGATVIGTV----STEEKAETARKLGCHHTINYSTQDFAEVVREITGGKG-VDVVYDSIGKDTLQKSLDCLR  235 (333)
T ss_dssp             HHHHHHHHTTCEEEEEE----SSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCC-EEEEEECSCTTTHHHHHHTEE
T ss_pred             HHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCC-CeEEEECCcHHHHHHHHHhhc
Confidence            99999999999999998    578888999999999999887643 467777776655 999999999977799999999


Q ss_pred             CCCeeC
Q 023007          283 FREEQW  288 (288)
Q Consensus       283 ~~G~~v  288 (288)
                      ++|+++
T Consensus       236 ~~G~iv  241 (333)
T 1wly_A          236 PRGMCA  241 (333)
T ss_dssp             EEEEEE
T ss_pred             cCCEEE
Confidence            999985

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3e-42  Score=308.98  Aligned_cols=233  Identities=22%  Similarity=0.288  Sum_probs=202.3

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhC-CCC-CCCCCCcccccceEEEEEEec
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG-VYP-VRPKVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g-~~~-~~~~~p~~~G~e~~G~V~~~G  121 (288)
                      |+.+||++++++++.    +++++.|.|++.++||+|||.++++|++|++.+.+ ..+ ....+|.++|||++|+|+++|
T Consensus         1 m~~~mka~~~~~~~~----l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG   76 (352)
T 1e3j_A            1 MASDNLSAVLYKQND----LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVG   76 (352)
T ss_dssp             ---CCEEEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEEC
T ss_pred             CcccCEEEEEEcCCc----EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeC
Confidence            456799999998764    88999999999999999999999999999998873 322 112568999999999999999


Q ss_pred             CCCCCCCCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchH
Q 023007          122 SAVTRLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPL  174 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~  174 (288)
                      +++++|++||+|++.+                           ...|+|+||+++|++.++++|+++++++|+.+ .++.
T Consensus        77 ~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~  155 (352)
T 1e3j_A           77 KNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLS  155 (352)
T ss_dssp             TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHH
T ss_pred             CCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHH
Confidence            9999999999999753                           12599999999999999999999999999876 4788


Q ss_pred             HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC--cccHHHH
Q 023007          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES--QLEVKNV  252 (288)
Q Consensus       175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~i  252 (288)
                      |||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++|+++.    .+++++++++++|++++++++  ....+.+
T Consensus       156 ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i  229 (352)
T 1e3j_A          156 VGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTA----RSPRRLEVAKNCGADVTLVVDPAKEEESSI  229 (352)
T ss_dssp             HHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTCSEEEECCTTTSCHHHH
T ss_pred             HHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHhCCCEEEcCcccccHHHHH
Confidence            999999 5689999999999997 9999999999999999988887    589999999999999999987  3456778


Q ss_pred             HHHhc---CCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          253 KGLLA---NLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~---~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      .+.++   +.+ +|++|||+|+.. ++.++++|+++|++|
T Consensus       230 ~~~~~~~~g~g-~D~vid~~g~~~~~~~~~~~l~~~G~iv  268 (352)
T 1e3j_A          230 IERIRSAIGDL-PNVTIDCSGNEKCITIGINITRTGGTLM  268 (352)
T ss_dssp             HHHHHHHSSSC-CSEEEECSCCHHHHHHHHHHSCTTCEEE
T ss_pred             HHHhccccCCC-CCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            88776   544 999999999875 599999999999985

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=2.6e-43  Score=325.47  Aligned_cols=242  Identities=24%  Similarity=0.282  Sum_probs=208.8

Q ss_pred             ccCCCccceEEEEccCC----------CCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHh--------------
Q 023007           41 SALMSPPSKAVVYEREG----------PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIE--------------   96 (288)
Q Consensus        41 ~~~~~~~~~a~~~~~~g----------~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~--------------   96 (288)
                      ..++|.+||++++..++          .+.+.+++++.|.|++.++||+|||.+++||++|++...              
T Consensus        18 ~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           18 AAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             HSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             ccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            45689999999999987          122348999999999999999999999999999975432              


Q ss_pred             --CCCCCCCCCC-cccccceEEEEEEecCCCCCCCCCCEEEecCC--------------------------CCcccceEE
Q 023007           97 --GVYPVRPKVP-AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--------------------------SSGTWQSYV  147 (288)
Q Consensus        97 --g~~~~~~~~p-~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~--------------------------~~G~~a~~~  147 (288)
                        +.+.....+| .++|||++|+|+++|+++++|++||+|++.+.                          ..|+|+||+
T Consensus        98 ~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~  177 (447)
T 4a0s_A           98 RQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYG  177 (447)
T ss_dssp             TTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEE
T ss_pred             ccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeee
Confidence              2222222456 69999999999999999999999999998651                          149999999


Q ss_pred             EeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhh--cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC
Q 023007          148 VKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG  225 (288)
Q Consensus       148 ~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~  225 (288)
                      ++|++.++++|+++++++|++++.+++|||+++...  +++++|++|||+|++|++|++++|+++..|+++++++    .
T Consensus       178 ~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~----~  253 (447)
T 4a0s_A          178 VVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV----S  253 (447)
T ss_dssp             EEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE----S
T ss_pred             ecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe----C
Confidence            999999999999999999999999999999999743  8899999999999999999999999999999999998    5


Q ss_pred             CHHHHHHHHhCCCCEEEeCCccc-------------------HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCe
Q 023007          226 SDEAKEKLKGLGADEVFTESQLE-------------------VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREE  286 (288)
Q Consensus       226 ~~~~~~~~~~~g~~~v~~~~~~~-------------------~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~  286 (288)
                      +++++++++++|+++++++.+.+                   .+.+.+++ +.+ +|++|||+|++.++.++++++++|+
T Consensus       254 ~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g-~Dvvid~~G~~~~~~~~~~l~~~G~  331 (447)
T 4a0s_A          254 SAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA-GRE-PDIVFEHTGRVTFGLSVIVARRGGT  331 (447)
T ss_dssp             SHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSC-CSEEEECSCHHHHHHHHHHSCTTCE
T ss_pred             CHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHh-CCC-ceEEEECCCchHHHHHHHHHhcCCE
Confidence            89999999999999999875432                   46777778 544 9999999999877999999999999


Q ss_pred             eC
Q 023007          287 QW  288 (288)
Q Consensus       287 ~v  288 (288)
                      +|
T Consensus       332 iv  333 (447)
T 4a0s_A          332 VV  333 (447)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.1e-42  Score=307.03  Aligned_cols=234  Identities=23%  Similarity=0.307  Sum_probs=209.2

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      +||++++++++.+. .+++++.|.|++.++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus         1 ~Mka~~~~~~g~~~-~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~~   78 (327)
T 1qor_A            1 MATRIEFHKHGGPE-VLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSKVGSGVKH   78 (327)
T ss_dssp             -CEEEEBSSCCSGG-GCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             CcEEEEEcCCCChh-heEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCCCceeEEEEEEECCCCCC
Confidence            38999999887653 4889999999999999999999999999999999987643 357899999999999999999999


Q ss_pred             CCCCCEEEecC-CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHH
Q 023007          127 LAPGDWVIPSP-PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (288)
Q Consensus       127 ~~~Gd~V~~~~-~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a  205 (288)
                      |++||+| +.+ ...|+|+||+++|.+.++++|+++++++|++++.+++|||+++.+.+++++|++|+|+|++|++|+++
T Consensus        79 ~~~GdrV-~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~  157 (327)
T 1qor_A           79 IKAGDRV-VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIA  157 (327)
T ss_dssp             CCTTCEE-EESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHH
T ss_pred             CCCCCEE-EECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHH
Confidence            9999999 443 23599999999999999999999999999999999999999998789999999999999999999999


Q ss_pred             HHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCC
Q 023007          206 IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFR  284 (288)
Q Consensus       206 ~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~  284 (288)
                      +|+++..|++|+++.    .++++.+.++++|++.++++.+.. .+.+.+.+++.+ +|++|||+|.+.++.++++++++
T Consensus       158 ~~~a~~~G~~V~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~D~vi~~~g~~~~~~~~~~l~~~  232 (327)
T 1qor_A          158 CQWAKALGAKLIGTV----GTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKK-VRVVYDSVGRDTWERSLDCLQRR  232 (327)
T ss_dssp             HHHHHHHTCEEEEEE----SSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCC-EEEEEECSCGGGHHHHHHTEEEE
T ss_pred             HHHHHHcCCEEEEEe----CCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCC-ceEEEECCchHHHHHHHHHhcCC
Confidence            999999999999998    578899999999999999886543 467777776655 99999999977779999999999


Q ss_pred             CeeC
Q 023007          285 EEQW  288 (288)
Q Consensus       285 G~~v  288 (288)
                      |+++
T Consensus       233 G~iv  236 (327)
T 1qor_A          233 GLMV  236 (327)
T ss_dssp             EEEE
T ss_pred             CEEE
Confidence            9985

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1e-42  Score=311.65  Aligned_cols=233  Identities=25%  Similarity=0.267  Sum_probs=205.0

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhC-CCC-CCCCCCcccccceEEEEEEec
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEG-VYP-VRPKVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g-~~~-~~~~~p~~~G~e~~G~V~~~G  121 (288)
                      |+.+||++++++++.   .+++++.|.|++.++||+|||.++++|++|++.+.| .++ ....+|.++|||++|+|+++|
T Consensus         1 ~m~~mka~~~~~~g~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG   77 (348)
T 2d8a_A            1 MSEKMVAIMKTKPGY---GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIG   77 (348)
T ss_dssp             --CEEEEEEECSSSS---SCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEEC
T ss_pred             CCCcceEEEEECCCC---CEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEEC
Confidence            345799999999884   288999999999999999999999999999999988 432 112568999999999999999


Q ss_pred             CCCCCCCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHH
Q 023007          122 SAVTRLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT  175 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~t  175 (288)
                      +++++|++||+|++.+.                          ..|+|+||+++|++.++++|+++++++|+.++ ++.|
T Consensus        78 ~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~t  156 (348)
T 2d8a_A           78 PGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGN  156 (348)
T ss_dssp             TTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHH
T ss_pred             CCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHH
Confidence            99999999999998641                          25999999999999999999999999999886 7889


Q ss_pred             HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHH
Q 023007          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVK  253 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~  253 (288)
                      ||+++ +.+++ +|++|||+|+ |++|++++|+|+.+|+ +|+++.    .+++++++++++|+++++++++.+ .+.+.
T Consensus       157 a~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~----~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~  229 (348)
T 2d8a_A          157 AVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSE----PSDFRRELAKKVGADYVINPFEEDVVKEVM  229 (348)
T ss_dssp             HHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHTCSEEECTTTSCHHHHHH
T ss_pred             HHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEECCCCcCHHHHHH
Confidence            99999 56888 9999999999 9999999999999999 899887    578999999999999999987644 46788


Q ss_pred             HHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      +++++.+ +|++|||+|.. .++.++++++++|+++
T Consensus       230 ~~~~g~g-~D~vid~~g~~~~~~~~~~~l~~~G~iv  264 (348)
T 2d8a_A          230 DITDGNG-VDVFLEFSGAPKALEQGLQAVTPAGRVS  264 (348)
T ss_dssp             HHTTTSC-EEEEEECSCCHHHHHHHHHHEEEEEEEE
T ss_pred             HHcCCCC-CCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            8888766 99999999984 4599999999999985

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2.1e-43  Score=311.86  Aligned_cols=222  Identities=17%  Similarity=0.189  Sum_probs=192.2

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      .+||++++++..   +.+++++.|.|++.++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus         3 ~tMka~~~~~~~---~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~   78 (315)
T 3goh_A            3 EQHQVWAYQTKT---HSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPIN-WSNGHVPGVDGAGVIVKVGAKVD   78 (315)
T ss_dssp             CEEEEEEEETTT---TEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC-CCTTCCCCSEEEEEEEEECTTSC
T ss_pred             cceEEEEEeCCC---CeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc-CCCCCEeeeeeEEEEEEeCCCCC
Confidence            479999999611   23899999999999999999999999999999999887654 36799999999999999999999


Q ss_pred             CCCCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          126 RLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       126 ~~~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      +|++||+|++.+.  ..|+|+||+++|++.++++|+++++++|++++.+++|||+++ +.+++++|++|||+|+ |++|+
T Consensus        79 ~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~  156 (315)
T 3goh_A           79 SKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGF-GAVNN  156 (315)
T ss_dssp             GGGTTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECC-SHHHH
T ss_pred             CCCCCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECC-CHHHH
Confidence            9999999999763  269999999999999999999999999999999999999999 7799999999999999 99999


Q ss_pred             HHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccC
Q 023007          204 CIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRF  283 (288)
Q Consensus       204 ~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~  283 (288)
                      +++|+|+.+|++|++++     +++++++++++|++++++  +  .+.+     +. ++|++|||+|++.+..++++|++
T Consensus       157 ~a~qlak~~Ga~Vi~~~-----~~~~~~~~~~lGa~~v~~--d--~~~v-----~~-g~Dvv~d~~g~~~~~~~~~~l~~  221 (315)
T 3goh_A          157 LLTQMLNNAGYVVDLVS-----ASLSQALAAKRGVRHLYR--E--PSQV-----TQ-KYFAIFDAVNSQNAAALVPSLKA  221 (315)
T ss_dssp             HHHHHHHHHTCEEEEEC-----SSCCHHHHHHHTEEEEES--S--GGGC-----CS-CEEEEECC-------TTGGGEEE
T ss_pred             HHHHHHHHcCCEEEEEE-----ChhhHHHHHHcCCCEEEc--C--HHHh-----CC-CccEEEECCCchhHHHHHHHhcC
Confidence            99999999999999887     467788999999999985  2  2222     33 49999999999888889999999


Q ss_pred             CCeeC
Q 023007          284 REEQW  288 (288)
Q Consensus       284 ~G~~v  288 (288)
                      +|+++
T Consensus       222 ~G~~v  226 (315)
T 3goh_A          222 NGHII  226 (315)
T ss_dssp             EEEEE
T ss_pred             CCEEE
Confidence            99985

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=3.6e-42  Score=307.45  Aligned_cols=235  Identities=31%  Similarity=0.367  Sum_probs=209.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++++++.+ +.+++++.|.|++.++||+|||.++++|++|++++.|.++....+|.++|||++|+|+++|+++++|
T Consensus         1 Mka~~~~~~g~~-~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~   79 (343)
T 2eih_A            1 MRAVVMRARGGP-EVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGF   79 (343)
T ss_dssp             CEEEEECSSSSG-GGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSC
T ss_pred             CeEEEEecCCCC-ceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCC
Confidence            799999998865 3488999999999999999999999999999999998765434678999999999999999999999


Q ss_pred             CCCCEEEecC--------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHH
Q 023007          128 APGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLE  181 (288)
Q Consensus       128 ~~Gd~V~~~~--------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~  181 (288)
                      ++||+|+..+                          ...|+|+||+++|++.++++|+++++++|++++.++.|||+++.
T Consensus        80 ~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~  159 (343)
T 2eih_A           80 APGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVV  159 (343)
T ss_dssp             CTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHT
T ss_pred             CCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHH
Confidence            9999999321                          12599999999999999999999999999999999999999998


Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLP  260 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g  260 (288)
                      +.+++++|++|||+|++|++|++++|+++..|++|+++.    .++++.+.++++|+++++|+.+.. .+.+.+.+++.+
T Consensus       160 ~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~----~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~  235 (343)
T 2eih_A          160 DKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATA----GSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKG  235 (343)
T ss_dssp             TTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTC
T ss_pred             HhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCC
Confidence            878999999999999999999999999999999999988    578999999999999999886543 466777776655


Q ss_pred             CccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          261 EPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       261 ~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                       +|++|||+|++..+.++++++++|+++
T Consensus       236 -~d~vi~~~g~~~~~~~~~~l~~~G~~v  262 (343)
T 2eih_A          236 -ADKVVDHTGALYFEGVIKATANGGRIA  262 (343)
T ss_dssp             -EEEEEESSCSSSHHHHHHHEEEEEEEE
T ss_pred             -ceEEEECCCHHHHHHHHHhhccCCEEE
Confidence             999999999777799999999999985

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=2.1e-42  Score=311.28  Aligned_cols=232  Identities=23%  Similarity=0.276  Sum_probs=202.0

Q ss_pred             CCCccceEEEEccCCCCCcceEEEEcCCC--------CCCCCeEEEEEeEEecChHHHHHHhCCC-C-CCCCCCcccccc
Q 023007           43 LMSPPSKAVVYEREGPPDSVIKMIELPPV--------EVKENDVCVKMLAAPINPSDINRIEGVY-P-VRPKVPAVGGYE  112 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p--------~~~~~evlI~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e  112 (288)
                      +++.+||++++.+++.    +++++.|.|        ++.++||+|||.++++|++|++++.+.. . ...++|.++|||
T Consensus         4 ~~~~~mka~~~~~~~~----l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E   79 (363)
T 3m6i_A            4 SASKTNIGVFTNPQHD----LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHE   79 (363)
T ss_dssp             -CCSCCEEEEECTTCC----EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCE
T ss_pred             CCcccceeEEEeCCCc----EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcc
Confidence            4677899999998765    899999999        9999999999999999999999887431 1 223568999999


Q ss_pred             eEEEEEEecCCCCCCCCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhh
Q 023007          113 GVGEVYSVGSAVTRLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEY  165 (288)
Q Consensus       113 ~~G~V~~~G~~~~~~~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~  165 (288)
                      ++|+|+++|+++++|++||+|++.+                           ...|+|+||+++|.+.++++|+ +++++
T Consensus        80 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~  158 (363)
T 3m6i_A           80 SAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYEN  158 (363)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHH
T ss_pred             eEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHH
Confidence            9999999999999999999999753                           1369999999999999999999 99999


Q ss_pred             hcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeC
Q 023007          166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTE  244 (288)
Q Consensus       166 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~  244 (288)
                      |+.+. ++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++ |+++.    .+++++++++++ +++++++
T Consensus       159 aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~a~~l-~~~~~~~  230 (363)
T 3m6i_A          159 GAMLE-PLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITD----IDEGRLKFAKEI-CPEVVTH  230 (363)
T ss_dssp             HHHHH-HHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEE----SCHHHHHHHHHH-CTTCEEE
T ss_pred             HHhhh-HHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHh-chhcccc
Confidence            99884 788999999 5699999999999998 99999999999999997 77776    589999999999 6666554


Q ss_pred             C------cccHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          245 S------QLEVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       245 ~------~~~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      .      +...+.+++++++.| +|++|||+|++. ++.++++|+++|+++
T Consensus       231 ~~~~~~~~~~~~~v~~~t~g~g-~Dvvid~~g~~~~~~~~~~~l~~~G~iv  280 (363)
T 3m6i_A          231 KVERLSAEESAKKIVESFGGIE-PAVALECTGVESSIAAAIWAVKFGGKVF  280 (363)
T ss_dssp             ECCSCCHHHHHHHHHHHTSSCC-CSEEEECSCCHHHHHHHHHHSCTTCEEE
T ss_pred             cccccchHHHHHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhcCCCEEE
Confidence            3      234577888888876 999999999985 599999999999985

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=4.1e-43  Score=324.78  Aligned_cols=243  Identities=19%  Similarity=0.209  Sum_probs=211.2

Q ss_pred             ccCCCccceEEEEccCC------------CCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCC---------
Q 023007           41 SALMSPPSKAVVYEREG------------PPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY---------   99 (288)
Q Consensus        41 ~~~~~~~~~a~~~~~~g------------~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~---------   99 (288)
                      +.++|.+||++++.+++            ++.+.+++++.|.|++.++||+|||.+++||++|++...+..         
T Consensus        24 ~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~  103 (456)
T 3krt_A           24 ALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER  103 (456)
T ss_dssp             HSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHH
T ss_pred             cCCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhh
Confidence            34678999999999862            122348999999999999999999999999999987643211         


Q ss_pred             -------CCCCCCC-cccccceEEEEEEecCCCCCCCCCCEEEecCC--------------------------CCcccce
Q 023007          100 -------PVRPKVP-AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--------------------------SSGTWQS  145 (288)
Q Consensus       100 -------~~~~~~p-~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~--------------------------~~G~~a~  145 (288)
                             .....+| .++|||++|+|+++|+++++|++||+|++.+.                          ..|+|+|
T Consensus       104 ~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~ae  183 (456)
T 3krt_A          104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAE  183 (456)
T ss_dssp             HHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBS
T ss_pred             ccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccc
Confidence                   0112456 58999999999999999999999999998541                          1499999


Q ss_pred             EEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhh--cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          146 YVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       146 ~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      |+++|.+.++++|+++++++|++++.+++|||+++...  +++++|++|||+|++|++|++++|+|+.+|+++++++   
T Consensus       184 y~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~---  260 (456)
T 3krt_A          184 IALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVV---  260 (456)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---
T ss_pred             eEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEE---
Confidence            99999999999999999999999999999999999765  7899999999999999999999999999999999998   


Q ss_pred             CCCHHHHHHHHhCCCCEEEeCCccc------------------HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCC
Q 023007          224 AGSDEAKEKLKGLGADEVFTESQLE------------------VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFRE  285 (288)
Q Consensus       224 ~~~~~~~~~~~~~g~~~v~~~~~~~------------------~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G  285 (288)
                       .+++++++++++|+++++++.+.+                  .+.+++++++.+ +|+||||+|++.+..++++++++|
T Consensus       261 -~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g-~Dvvid~~G~~~~~~~~~~l~~~G  338 (456)
T 3krt_A          261 -SSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGED-IDIVFEHPGRETFGASVFVTRKGG  338 (456)
T ss_dssp             -SSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCC-EEEEEECSCHHHHHHHHHHEEEEE
T ss_pred             -CCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCC-CcEEEEcCCchhHHHHHHHhhCCc
Confidence             589999999999999999987642                  267888888776 999999999977799999999999


Q ss_pred             eeC
Q 023007          286 EQW  288 (288)
Q Consensus       286 ~~v  288 (288)
                      ++|
T Consensus       339 ~iv  341 (456)
T 3krt_A          339 TIT  341 (456)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            985

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.5e-42  Score=306.74  Aligned_cols=235  Identities=19%  Similarity=0.309  Sum_probs=208.1

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      +|.+||++++++++.+   +++++.|.|++.++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+++|++
T Consensus         2 ~p~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~   78 (347)
T 2hcy_A            2 IPETQKGVIFYESHGK---LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGEN   78 (347)
T ss_dssp             CCSEEEEEEESSTTCC---CEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTT
T ss_pred             CCcccEEEEEeCCCCC---CEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCC
Confidence            5778999999998853   7889999999999999999999999999999999876544467899999999999999999


Q ss_pred             CCCCCCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHH
Q 023007          124 VTRLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTA  176 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta  176 (288)
                      +++|++||+|++.+                           ...|+|+||+++|++.++++|+++++++|+.++.+++||
T Consensus        79 v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  158 (347)
T 2hcy_A           79 VKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV  158 (347)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHH
T ss_pred             CCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHH
Confidence            99999999998632                           125899999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC-cc-cHHHHHH
Q 023007          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES-QL-EVKNVKG  254 (288)
Q Consensus       177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~-~~-~~~~i~~  254 (288)
                      |+++.+ .++++|++|||+|++|++|++++++++..|++|+++.    .++++.+.++++|+++++|+. .. ..+.+.+
T Consensus       159 ~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~----~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~  233 (347)
T 2hcy_A          159 YKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGID----GGEGKEELFRSIGGEVFIDFTKEKDIVGAVLK  233 (347)
T ss_dssp             HHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----CSTTHHHHHHHTTCCEEEETTTCSCHHHHHHH
T ss_pred             HHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEc----CCHHHHHHHHHcCCceEEecCccHhHHHHHHH
Confidence            999976 4899999999999999999999999999999999988    467778888999999999876 23 3466777


Q ss_pred             HhcCCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGG-NSASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v  288 (288)
                      .+++ + +|++||++|. ..++.++++|+++|+++
T Consensus       234 ~~~~-~-~D~vi~~~g~~~~~~~~~~~l~~~G~iv  266 (347)
T 2hcy_A          234 ATDG-G-AHGVINVSVSEAAIEASTRYVRANGTTV  266 (347)
T ss_dssp             HHTS-C-EEEEEECSSCHHHHHHHTTSEEEEEEEE
T ss_pred             HhCC-C-CCEEEECCCcHHHHHHHHHHHhcCCEEE
Confidence            7777 5 9999999998 45599999999999985

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=3.2e-43  Score=311.83  Aligned_cols=230  Identities=18%  Similarity=0.216  Sum_probs=203.9

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++++++.++ .+++++.|.|++.++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+++|  +++|
T Consensus         1 MkA~~~~~~g~~~-~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~   77 (324)
T 3nx4_A            1 MQALILEQQDGKT-LASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRF   77 (324)
T ss_dssp             CEEEEEEESSSSE-EEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTC
T ss_pred             CceEEEecCCCCc-eeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCC
Confidence            7999999998763 489999999999999999999999999999999999877656789999999999999998  5789


Q ss_pred             CCCCEEEecC-----CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhh--cCCCCCC-eEEEeCCCC
Q 023007          128 APGDWVIPSP-----PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF--TTLNSGD-SIVQNGATS  199 (288)
Q Consensus       128 ~~Gd~V~~~~-----~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~-~vlI~g~~g  199 (288)
                      ++||+|++.+     ...|+|+||+++|++.++++|+++++++|++++..++|||++++..  .++++++ +|||+|++|
T Consensus        78 ~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G  157 (324)
T 3nx4_A           78 HAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASG  157 (324)
T ss_dssp             CTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTS
T ss_pred             CCCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCc
Confidence            9999999764     1369999999999999999999999999999999999999998643  4566633 499999999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHh
Q 023007          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLK  279 (288)
Q Consensus       200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~  279 (288)
                      ++|++++|+|+.+|++|++++    .+++++++++++|+++++|+++...  +++++++  ++|++|||+|++.++.+++
T Consensus       158 ~vG~~aiqla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~--~~~~~~~--~~d~v~d~~g~~~~~~~~~  229 (324)
T 3nx4_A          158 GVGSTAVALLHKLGYQVAAVS----GRESTHGYLKSLGANRILSRDEFAE--SRPLEKQ--LWAGAIDTVGDKVLAKVLA  229 (324)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEE----SCGGGHHHHHHHTCSEEEEGGGSSC--CCSSCCC--CEEEEEESSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhcCCCEEEecCCHHH--HHhhcCC--CccEEEECCCcHHHHHHHH
Confidence            999999999999999999998    6889999999999999999876542  4445544  4999999999997799999


Q ss_pred             hccCCCeeC
Q 023007          280 FLRFREEQW  288 (288)
Q Consensus       280 ~l~~~G~~v  288 (288)
                      +++++|+++
T Consensus       230 ~l~~~G~iv  238 (324)
T 3nx4_A          230 QMNYGGCVA  238 (324)
T ss_dssp             TEEEEEEEE
T ss_pred             HHhcCCEEE
Confidence            999999985

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.5e-42  Score=310.44  Aligned_cols=225  Identities=20%  Similarity=0.240  Sum_probs=200.1

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      |+.+||++++.+++++   +++++.|.|+++++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus         1 M~m~mka~~~~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~V~~vG~~   76 (348)
T 3two_A            1 MRVQSKGFAIFSKDEH---FKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE-GIYPMIPGHEIAGIIKEVGKG   76 (348)
T ss_dssp             CCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC-CCSSBCCCCCEEEEEEEECTT
T ss_pred             CceEEEEEEEccCCCC---CeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC-CCCCeecCcceeEEEEEECCC
Confidence            4567999999998764   889999999999999999999999999999999987654 367999999999999999999


Q ss_pred             CCCCCCCCEEEecCC--------------------------C----------CcccceEEEeeCCcEEEcCCCCChhhhc
Q 023007          124 VTRLAPGDWVIPSPP--------------------------S----------SGTWQSYVVKDQSVWHKVSKDSPMEYAA  167 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~--------------------------~----------~G~~a~~~~~~~~~l~~ip~~~~~~~aa  167 (288)
                      +++|++||+|++.+.                          .          .|+|+||+++|++.++++|+++++++|+
T Consensus        77 v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  156 (348)
T 3two_A           77 VKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVA  156 (348)
T ss_dssp             CCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHG
T ss_pred             CCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhh
Confidence            999999999986421                          0          1999999999999999999999999999


Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~  247 (288)
                      .+++++.|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|++++    .+++++++++++|+++++ .+..
T Consensus       157 ~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~v~-~~~~  229 (348)
T 3two_A          157 PLLCAGITTYSPLKF-SKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFA----RNEHKKQDALSMGVKHFY-TDPK  229 (348)
T ss_dssp             GGGTHHHHHHHHHHH-TTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEEC----SSSTTHHHHHHTTCSEEE-SSGG
T ss_pred             hhhhhHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEe----CCHHHHHHHHhcCCCeec-CCHH
Confidence            999999999999976 69999999999998 9999999999999999999987    578889999999999998 3332


Q ss_pred             cHHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          248 EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      .   +.    . + +|+||||+|++ .++.++++|+++|+++
T Consensus       230 ~---~~----~-~-~D~vid~~g~~~~~~~~~~~l~~~G~iv  262 (348)
T 3two_A          230 Q---CK----E-E-LDFIISTIPTHYDLKDYLKLLTYNGDLA  262 (348)
T ss_dssp             G---CC----S-C-EEEEEECCCSCCCHHHHHTTEEEEEEEE
T ss_pred             H---Hh----c-C-CCEEEECCCcHHHHHHHHHHHhcCCEEE
Confidence            2   11    1 3 99999999998 6799999999999985

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.5e-41  Score=303.64  Aligned_cols=228  Identities=25%  Similarity=0.244  Sum_probs=200.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCC-CCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTR  126 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~-~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~  126 (288)
                      ||+++++++|.    ++++|.|.|+ +++|||||||.+++||++|++.+.|..+.  .+|.++|||++|+|+++|+++++
T Consensus         1 MkAvv~~~~g~----l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~--~~P~i~G~E~~G~V~~vG~~V~~   74 (346)
T 4a2c_A            1 MKSVVNDTDGI----VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH--YYPITLGHEFSGYIDAVGSGVDD   74 (346)
T ss_dssp             CEEEEECSSSC----EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSS--SSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCEEEEecCCC----EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCC--CCCccccEEEEEEEEEECCCccc
Confidence            89999999986    9999999999 57999999999999999999999886554  57999999999999999999999


Q ss_pred             CCCCCEEEecCC--------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          127 LAPGDWVIPSPP--------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       127 ~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      +++||+|++.+.                          .+|+|+||+++|++.++++|+++++++||.++  .++++...
T Consensus        75 ~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~--~~~~~~~~  152 (346)
T 4a2c_A           75 LHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE--PITVGLHA  152 (346)
T ss_dssp             CCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH--HHHHHHHH
T ss_pred             ccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch--HHHHHHHH
Confidence            999999987542                          25999999999999999999999999999876  44544445


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCC
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANL  259 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~  259 (288)
                      ....++++|++|+|+|+ |++|++++|+|+.+|++++++++   .+++++++++++|+++++|+++.+. +.+.+++++.
T Consensus       153 ~~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~---~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~  228 (346)
T 4a2c_A          153 FHLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAID---ISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELR  228 (346)
T ss_dssp             HHHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEE---SCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGC
T ss_pred             HHHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEe---chHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccC
Confidence            56699999999999998 99999999999999998766654   5899999999999999999987654 5667778776


Q ss_pred             CCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      + +|+++||+|.... +.++++++++|+++
T Consensus       229 g-~d~v~d~~G~~~~~~~~~~~l~~~G~~v  257 (346)
T 4a2c_A          229 F-NQLILETAGVPQTVELAVEIAGPHAQLA  257 (346)
T ss_dssp             S-SEEEEECSCSHHHHHHHHHHCCTTCEEE
T ss_pred             C-cccccccccccchhhhhhheecCCeEEE
Confidence            6 9999999998765 99999999999874

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=6.1e-42  Score=306.41  Aligned_cols=230  Identities=21%  Similarity=0.222  Sum_probs=205.8

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      |||+++...++.  .++++|.|.|+++|+||||||.+++||++|++++.|.++.  ++|.++|||++|+|+++|+++++|
T Consensus         1 MKA~v~~~~~~~--~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~--~~p~i~GhE~aG~V~~vG~~V~~~   76 (348)
T 4eez_A            1 MKAAVVRHNPDG--YADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN--KAGTVLGHEGIGIVKEIGADVSSL   76 (348)
T ss_dssp             CEEEEECSSCCS--SEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC--CTTCBCCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEEcCCCC--cEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC--CCCcccceeEEEEEEEECceeeec
Confidence            799999764432  3899999999999999999999999999999999997765  579999999999999999999999


Q ss_pred             CCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|+..+.                           .+|+|+||+.++++.++++|+++++.+|++++.+++|||+++
T Consensus        77 ~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  156 (348)
T 4eez_A           77 QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI  156 (348)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeee
Confidence            99999976431                           169999999999999999999999999999999999999998


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcC
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLAN  258 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~  258 (288)
                      +. .++++|++|+|+|+ |++|.+++|+++.+ |++|+++.    .+++++++++++|+++++|+++.+ .+.+++++++
T Consensus       157 ~~-~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~----~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g  230 (348)
T 4eez_A          157 KV-SGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVD----INQDKLNLAKKIGADVTINSGDVNPVDEIKKITGG  230 (348)
T ss_dssp             HH-HTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEE----SCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTS
T ss_pred             cc-cCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEE----CcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCC
Confidence            64 88999999999998 99999999999866 67999888    689999999999999999998754 5789999999


Q ss_pred             CCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      .| +|.+++|+++... +.++++++++|+++
T Consensus       231 ~g-~d~~~~~~~~~~~~~~~~~~l~~~G~~v  260 (348)
T 4eez_A          231 LG-VQSAIVCAVARIAFEQAVASLKPMGKMV  260 (348)
T ss_dssp             SC-EEEEEECCSCHHHHHHHHHTEEEEEEEE
T ss_pred             CC-ceEEEEeccCcchhheeheeecCCceEE
Confidence            87 9999999998775 99999999999874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.2e-42  Score=309.52  Aligned_cols=239  Identities=22%  Similarity=0.263  Sum_probs=204.7

Q ss_pred             hhhhccCC-CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEE
Q 023007           37 VRAFSALM-SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVG  115 (288)
Q Consensus        37 ~~~~~~~~-~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G  115 (288)
                      .+.+..+| ..+||+++++++++   .+++++.|.|++.++||+|||.+++||++|++.+.|.++. ..+|.++|||++|
T Consensus         6 ~~~~~~~~~~~~mka~~~~~~g~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~-~~~P~v~GhE~~G   81 (380)
T 1vj0_A            6 IHHHHHHMMGLKAHAMVLEKFNQ---PLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR-VPLPIILGHEGAG   81 (380)
T ss_dssp             --------CCEEEEEEEBCSTTS---CCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEE
T ss_pred             cchhhhhHhhhheEEEEEecCCC---CeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCC-CCCCcccCcCcEE
Confidence            44555454 55899999999882   2889999999999999999999999999999999986542 3578999999999


Q ss_pred             EEEEecCCCC------CCCCCCEEEecC-----------------------------------CCCcccceEEEe-eCCc
Q 023007          116 EVYSVGSAVT------RLAPGDWVIPSP-----------------------------------PSSGTWQSYVVK-DQSV  153 (288)
Q Consensus       116 ~V~~~G~~~~------~~~~Gd~V~~~~-----------------------------------~~~G~~a~~~~~-~~~~  153 (288)
                      +|+++| +++      +|++||+|++.+                                   ...|+|+||+++ |++.
T Consensus        82 ~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~  160 (380)
T 1vj0_A           82 RVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD  160 (380)
T ss_dssp             EEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCC
T ss_pred             EEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccce
Confidence            999999 999      999999999742                                   125999999999 9999


Q ss_pred             EEEcCCCCChh-hhcccccchHHHHHHHHhhcC-CCCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHH
Q 023007          154 WHKVSKDSPME-YAATIIVNPLTALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAK  230 (288)
Q Consensus       154 l~~ip~~~~~~-~aa~l~~~~~ta~~~l~~~~~-~~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~  230 (288)
                      ++++|++++++ +|+.++ ++.|||+++. .++ +++|++|||+| +|++|++++|+|+.+| ++|++++    .+++++
T Consensus       161 ~~~iP~~l~~~~~Aa~~~-~~~ta~~al~-~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~  233 (380)
T 1vj0_A          161 VLKVSEKDDLDVLAMAMC-SGATAYHAFD-EYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIA----GSPNRL  233 (380)
T ss_dssp             EEEECTTSCHHHHHHHTT-HHHHHHHHHH-TCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEE----SCHHHH
T ss_pred             EEECCCCCChHHhHhhhc-HHHHHHHHHH-hcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEc----CCHHHH
Confidence            99999999999 777776 9999999995 478 99999999999 6999999999999999 5999998    689999


Q ss_pred             HHHHhCCCCEEEeCC---ccc-HHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          231 EKLKGLGADEVFTES---QLE-VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       231 ~~~~~~g~~~v~~~~---~~~-~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      ++++++|++++++++   +.+ .+.+++++++.+ +|+||||+|+. .++.++++|+++|++|
T Consensus       234 ~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g-~Dvvid~~g~~~~~~~~~~~l~~~G~iv  295 (380)
T 1vj0_A          234 KLAEEIGADLTLNRRETSVEERRKAIMDITHGRG-ADFILEATGDSRALLEGSELLRRGGFYS  295 (380)
T ss_dssp             HHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSC-EEEEEECSSCTTHHHHHHHHEEEEEEEE
T ss_pred             HHHHHcCCcEEEeccccCcchHHHHHHHHhCCCC-CcEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            999999999999987   443 467888888766 99999999985 5599999999999985

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=9.7e-42  Score=306.14  Aligned_cols=231  Identities=25%  Similarity=0.302  Sum_probs=201.6

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCC-C-CCCCCCcccccceEEEEEEecC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVY-P-VRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      +.+||++++++++.    +++++.|.|++.++||+|||.++++|++|++.+.+.. . ....+|.++|||++|+|+++|+
T Consensus         5 ~~~mka~~~~~~~~----l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~   80 (356)
T 1pl8_A            5 KPNNLSLVVHGPGD----LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGS   80 (356)
T ss_dssp             CCCCEEEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECT
T ss_pred             ccCceEEEEecCCc----EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECC
Confidence            45699999998754    8899999999999999999999999999999887432 1 1124689999999999999999


Q ss_pred             CCCCCCCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHH
Q 023007          123 AVTRLAPGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT  175 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~t  175 (288)
                      ++++|++||+|++.+                           ...|+|+||+++|.+.++++|+++++++|+.+ .++.|
T Consensus        81 ~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~t  159 (356)
T 1pl8_A           81 SVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSV  159 (356)
T ss_dssp             TCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHH
T ss_pred             CCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHH
Confidence            999999999999752                           12599999999999999999999999999876 47889


Q ss_pred             HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC----cccHH
Q 023007          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTES----QLEVK  250 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~----~~~~~  250 (288)
                      ||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .+++++++++++|++++++++    ....+
T Consensus       160 a~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~  233 (356)
T 1pl8_A          160 GIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTD----LSATRLSKAKEIGADLVLQISKESPQEIAR  233 (356)
T ss_dssp             HHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEE----SCHHHHHHHHHTTCSEEEECSSCCHHHHHH
T ss_pred             HHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHhCCCEEEcCcccccchHHH
Confidence            99999 5689999999999997 9999999999999999 888887    589999999999999999987    33456


Q ss_pred             HHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          251 NVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       251 ~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      .+++.++ .+ +|+||||+|++. ++.++++|+++|+++
T Consensus       234 ~i~~~~~-~g-~D~vid~~g~~~~~~~~~~~l~~~G~iv  270 (356)
T 1pl8_A          234 KVEGQLG-CK-PEVTIECTGAEASIQAGIYATRSGGTLV  270 (356)
T ss_dssp             HHHHHHT-SC-CSEEEECSCCHHHHHHHHHHSCTTCEEE
T ss_pred             HHHHHhC-CC-CCEEEECCCChHHHHHHHHHhcCCCEEE
Confidence            7777776 44 999999999875 599999999999985

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.8e-41  Score=302.49  Aligned_cols=229  Identities=25%  Similarity=0.310  Sum_probs=204.4

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++++++.+   +++++.|.|+++++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+++|+++++|
T Consensus         1 Mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~   77 (339)
T 1rjw_A            1 MKAAVVEQFKEP---LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHL   77 (339)
T ss_dssp             CEEEEBSSTTSC---CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSC
T ss_pred             CeEEEEcCCCCC---cEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcC
Confidence            799999998843   78899999999999999999999999999999998765444679999999999999999999999


Q ss_pred             CCCCEEEecC---------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSP---------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~---------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|++.+                           ...|+|+||+++|++.++++|+++++++|+.++.++.|||+++
T Consensus        78 ~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l  157 (339)
T 1rjw_A           78 KVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKAL  157 (339)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence            9999998632                           1258999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCC
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANL  259 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~  259 (288)
                      .+. ++++|++|||+|+ |++|++++|+++.+|++|+++.    .++++++.++++|+++++|+.+.+ .+.+.+.+ + 
T Consensus       158 ~~~-~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~-~-  229 (339)
T 1rjw_A          158 KVT-GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVD----IGDEKLELAKELGADLVVNPLKEDAAKFMKEKV-G-  229 (339)
T ss_dssp             HHH-TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHH-S-
T ss_pred             Hhc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHCCCCEEecCCCccHHHHHHHHh-C-
Confidence            874 8999999999999 8899999999999999999887    689999999999999999987543 45677777 3 


Q ss_pred             CCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                       ++|++|||+|.. .++.++++++++|+++
T Consensus       230 -~~d~vid~~g~~~~~~~~~~~l~~~G~~v  258 (339)
T 1rjw_A          230 -GVHAAVVTAVSKPAFQSAYNSIRRGGACV  258 (339)
T ss_dssp             -SEEEEEESSCCHHHHHHHHHHEEEEEEEE
T ss_pred             -CCCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence             499999999984 4599999999999985

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.2e-41  Score=307.68  Aligned_cols=236  Identities=25%  Similarity=0.278  Sum_probs=204.6

Q ss_pred             CCCccceEEEEccCCCCCcceEE-EEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCC--------------CCCCCC
Q 023007           43 LMSPPSKAVVYEREGPPDSVIKM-IELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYP--------------VRPKVP  106 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~~~~~~~-~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~--------------~~~~~p  106 (288)
                      .++.+||++++++++.+. .+++ ++.|.|.+ .++||+|||.+++||++|++++.|..+              ....+|
T Consensus        17 ~~~~~mka~~~~~~g~~~-~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P   95 (375)
T 2vn8_A           17 NLYFQSMAWVIDKYGKNE-VLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFP   95 (375)
T ss_dssp             -CCCCEEEEEBSSCCSGG-GCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCS
T ss_pred             ccCccceeEEeccCCCcc-ceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCC
Confidence            457789999999988653 4788 89999985 999999999999999999999887531              112378


Q ss_pred             cccccceEEEEEEecCCCCCCCCCCEEEecCC--CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhc
Q 023007          107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPP--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT  184 (288)
Q Consensus       107 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~  184 (288)
                      .++|||++|+|+++|+++++|++||+|++...  ..|+|+||++++++.++++|+++++++|++++.+++|||+++.+.+
T Consensus        96 ~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~  175 (375)
T 2vn8_A           96 LTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVG  175 (375)
T ss_dssp             BCCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTT
T ss_pred             cccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999998753  2699999999999999999999999999999989999999998778


Q ss_pred             C----CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCC
Q 023007          185 T----LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANL  259 (288)
Q Consensus       185 ~----~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~  259 (288)
                      +    +++|++|||+|++|++|++++|+|+..|++|++++     +++++++++++|+++++++++... +.+.+.   .
T Consensus       176 ~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-----~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~---~  247 (375)
T 2vn8_A          176 GLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-----SQDASELVRKLGADDVIDYKSGSVEEQLKSL---K  247 (375)
T ss_dssp             CCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-----CGGGHHHHHHTTCSEEEETTSSCHHHHHHTS---C
T ss_pred             ccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-----ChHHHHHHHHcCCCEEEECCchHHHHHHhhc---C
Confidence            8    99999999999889999999999999999998877     457788999999999999876543 444432   2


Q ss_pred             CCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                       ++|++|||+|++..  +.++++++++|+++
T Consensus       248 -g~D~vid~~g~~~~~~~~~~~~l~~~G~iv  277 (375)
T 2vn8_A          248 -PFDFILDNVGGSTETWAPDFLKKWSGATYV  277 (375)
T ss_dssp             -CBSEEEESSCTTHHHHGGGGBCSSSCCEEE
T ss_pred             -CCCEEEECCCChhhhhHHHHHhhcCCcEEE
Confidence             49999999999843  88899999999985

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=8.2e-42  Score=307.23  Aligned_cols=236  Identities=24%  Similarity=0.302  Sum_probs=207.7

Q ss_pred             CCCccceEEEEccCCCC-CcceEE-EEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEe
Q 023007           43 LMSPPSKAVVYEREGPP-DSVIKM-IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~-~~~~~~-~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~  120 (288)
                      .++.+||++++++++.+ .+.+++ ++.|.|++.++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+++
T Consensus        19 ~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~v   98 (362)
T 2c0c_A           19 YFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVAL   98 (362)
T ss_dssp             HHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEE
T ss_pred             cchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEE
Confidence            34668999999998753 234888 9999999999999999999999999999999876543467899999999999999


Q ss_pred             cCCCC-CCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCC
Q 023007          121 GSAVT-RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS  199 (288)
Q Consensus       121 G~~~~-~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g  199 (288)
                      |++++ +|++||+|++..  .|+|+||+++|++.++++|+. + .++++++.+++|||+++.+.+++++|++|||+|++|
T Consensus        99 G~~V~~~~~vGdrV~~~~--~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G  174 (362)
T 2c0c_A           99 GLSASARYTVGQAVAYMA--PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAG  174 (362)
T ss_dssp             CTTGGGTCCTTCEEEEEC--SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTB
T ss_pred             CCCccCCCCCCCEEEEcc--CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCc
Confidence            99999 999999999875  589999999999999999986 4 466788889999999999888999999999999889


Q ss_pred             hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH-HHHHHHhcCCCCccEEEECCCcccHHHHH
Q 023007          200 IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVL  278 (288)
Q Consensus       200 ~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~  278 (288)
                      ++|++++|+++..|++|++++    .++++++.++++|++.++++++.++ +.+++.++ . ++|++|||+|+..++.++
T Consensus       175 ~iG~~~~q~a~~~Ga~Vi~~~----~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~-~-g~D~vid~~g~~~~~~~~  248 (362)
T 2c0c_A          175 GTGQFAMQLSKKAKCHVIGTC----SSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYP-E-GVDVVYESVGGAMFDLAV  248 (362)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCT-T-CEEEEEECSCTHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEEE----CCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcC-C-CCCEEEECCCHHHHHHHH
Confidence            999999999999999999998    5789999999999999999876543 55666654 3 499999999997779999


Q ss_pred             hhccCCCeeC
Q 023007          279 KFLRFREEQW  288 (288)
Q Consensus       279 ~~l~~~G~~v  288 (288)
                      ++++++|+++
T Consensus       249 ~~l~~~G~iv  258 (362)
T 2c0c_A          249 DALATKGRLI  258 (362)
T ss_dssp             HHEEEEEEEE
T ss_pred             HHHhcCCEEE
Confidence            9999999985

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.2e-41  Score=305.88  Aligned_cols=230  Identities=19%  Similarity=0.206  Sum_probs=201.0

Q ss_pred             CCccceEEEEccCCCCCcceEEEE--cCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEec
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIE--LPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~--~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G  121 (288)
                      +|.+||++++++++.+   +++++  .|.|++.++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|
T Consensus         3 ~p~~mka~~~~~~~~~---l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~GhE~~G~V~~vG   78 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDW---KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGKVVKLG   78 (360)
T ss_dssp             TTTCEEEEEECCSSST---TSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEEEEEEC
T ss_pred             CChheEEEEEecCCCC---eeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC-CCCCcccCcCceEEEEEeC
Confidence            4668999999998754   66778  8999999999999999999999999999886543 3578999999999999999


Q ss_pred             CCCC-CCCCCCEEEecC----------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhh
Q 023007          122 SAVT-RLAPGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYA  166 (288)
Q Consensus       122 ~~~~-~~~~Gd~V~~~~----------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~a  166 (288)
                      ++++ +|++||+|+..+                                  ...|+|+||+++|++.++++|+++++++|
T Consensus        79 ~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  158 (360)
T 1piw_A           79 PKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLA  158 (360)
T ss_dssp             TTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHH
T ss_pred             CCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHh
Confidence            9999 999999995321                                  12589999999999999999999999999


Q ss_pred             cccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc
Q 023007          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (288)
Q Consensus       167 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~  246 (288)
                      +.++.++.|||+++.+ +++++|++|||+|+ |++|++++|+|+.+|++|++++    .+++++++++++|+++++++++
T Consensus       159 a~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~----~~~~~~~~~~~lGa~~v~~~~~  232 (360)
T 1piw_A          159 APLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVIS----RSSRKREDAMKMGADHYIATLE  232 (360)
T ss_dssp             GGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE----SSSTTHHHHHHHTCSEEEEGGG
T ss_pred             hhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHcCCCEEEcCcC
Confidence            9999999999999987 89999999999999 9999999999999999999988    5788889999999999999876


Q ss_pred             c-cHHHHHHHhcCCCCccEEEECCCc---ccHHHHHhhccCCCeeC
Q 023007          247 L-EVKNVKGLLANLPEPALGFNCVGG---NSASKVLKFLRFREEQW  288 (288)
Q Consensus       247 ~-~~~~i~~~~~~~g~~D~v~d~~g~---~~~~~a~~~l~~~G~~v  288 (288)
                      . ..  ..... +  ++|++|||+|+   ..++.++++|+++|+++
T Consensus       233 ~~~~--~~~~~-~--~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv  273 (360)
T 1piw_A          233 EGDW--GEKYF-D--TFDLIVVCASSLTDIDFNIMPKAMKVGGRIV  273 (360)
T ss_dssp             TSCH--HHHSC-S--CEEEEEECCSCSTTCCTTTGGGGEEEEEEEE
T ss_pred             chHH--HHHhh-c--CCCEEEECCCCCcHHHHHHHHHHhcCCCEEE
Confidence            4 32  12222 2  49999999998   55689999999999985

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.5e-41  Score=303.63  Aligned_cols=229  Identities=19%  Similarity=0.254  Sum_probs=197.9

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC-CCCCCcccccceEEEEEEecCCC
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-RPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      .+||++++++++.+   +++++.|.|++.++||+|||.++++|++|++.+.|.++. ...+|.++|||++|+|+++|++ 
T Consensus         2 ~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-   77 (344)
T 2h6e_A            2 VKSKAALLKKFSEP---LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-   77 (344)
T ss_dssp             EEEEBCEECSCCC--------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-
T ss_pred             ceeEEEEEecCCCC---CeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-
Confidence            36899999998743   788899999999999999999999999999999886542 2357899999999999999999 


Q ss_pred             CCCCCCCEEEecCC--------------------------CCcccceEEEee-CCcEEEcCCCCChhhhcccccchHHHH
Q 023007          125 TRLAPGDWVIPSPP--------------------------SSGTWQSYVVKD-QSVWHKVSKDSPMEYAATIIVNPLTAL  177 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~-~~~l~~ip~~~~~~~aa~l~~~~~ta~  177 (288)
                      ++|++||+|++...                          ..|+|+||+++| ++.++++ +++++++|+.++++++|||
T Consensus        78 ~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~  156 (344)
T 2h6e_A           78 AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSM  156 (344)
T ss_dssp             CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHH
T ss_pred             CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHH
Confidence            99999999987641                          259999999999 9999999 9999999999999999999


Q ss_pred             HHHHhh----cCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-ccHH
Q 023007          178 RMLEDF----TTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-LEVK  250 (288)
Q Consensus       178 ~~l~~~----~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~  250 (288)
                      +++...    +++ +|++|||+|+ |++|++++|+|+.+  |++|++++    .+++++++++++|+++++++++ .+  
T Consensus       157 ~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~vi~~~~~~~--  228 (344)
T 2h6e_A          157 GAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGIS----RSKKHRDFALELGADYVSEMKDAES--  228 (344)
T ss_dssp             HHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEEC----SCHHHHHHHHHHTCSEEECHHHHHH--
T ss_pred             HHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEe----CCHHHHHHHHHhCCCEEeccccchH--
Confidence            999875    288 9999999999 99999999999999  99988887    5899999999999999998765 32  


Q ss_pred             HHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          251 NVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       251 ~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      .+.+++++.+ +|+||||+|++ .++.++++++++|+++
T Consensus       229 ~~~~~~~g~g-~D~vid~~g~~~~~~~~~~~l~~~G~iv  266 (344)
T 2h6e_A          229 LINKLTDGLG-ASIAIDLVGTEETTYNLGKLLAQEGAII  266 (344)
T ss_dssp             HHHHHHTTCC-EEEEEESSCCHHHHHHHHHHEEEEEEEE
T ss_pred             HHHHhhcCCC-ccEEEECCCChHHHHHHHHHhhcCCEEE
Confidence            3455665555 99999999998 5699999999999985

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=7.3e-41  Score=300.52  Aligned_cols=229  Identities=22%  Similarity=0.261  Sum_probs=199.5

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      +.+|+++...++++   .+++++.|.|++.++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus         7 ~m~~~a~~~~~~~~---~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~v   82 (357)
T 2cf5_A            7 ERKTTGWAARDPSG---ILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM-SNYPMVPGHEVVGEVVEVGSDV   82 (357)
T ss_dssp             CCEEEEEEECSTTC---CEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC-CCSSBCCCCEEEEEEEEECSSC
T ss_pred             cceeEEEEEccCCC---CcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC-CCCCeecCcceeEEEEEECCCC
Confidence            44677777776543   3889999999999999999999999999999999886543 3578999999999999999999


Q ss_pred             CCCCCCCEEEecC----------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccc
Q 023007          125 TRLAPGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATII  170 (288)
Q Consensus       125 ~~~~~Gd~V~~~~----------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~  170 (288)
                      ++|++||+|+..+                                  ...|+|+||+++|++.++++|+++++++|+.++
T Consensus        83 ~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~  162 (357)
T 2cf5_A           83 SKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLL  162 (357)
T ss_dssp             CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGG
T ss_pred             CCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhh
Confidence            9999999998532                                  135899999999999999999999999999999


Q ss_pred             cchHHHHHHHHhhcCCC-CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCccc
Q 023007          171 VNPLTALRMLEDFTTLN-SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLE  248 (288)
Q Consensus       171 ~~~~ta~~~l~~~~~~~-~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~  248 (288)
                      .++.|||+++.+ .+++ +|++|||+|+ |++|++++|+|+.+|++|++++    .++++++.++ ++|+++++++++. 
T Consensus       163 ~~~~ta~~~l~~-~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~~~lGa~~vi~~~~~-  235 (357)
T 2cf5_A          163 CAGVTVYSPLSH-FGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVIS----SSNKKREEALQDLGADDYVIGSDQ-  235 (357)
T ss_dssp             THHHHHHHHHHH-TSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE----SSTTHHHHHHTTSCCSCEEETTCH-
T ss_pred             hhHHHHHHHHHh-cCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEe----CChHHHHHHHHHcCCceeeccccH-
Confidence            999999999976 6788 9999999997 9999999999999999999988    5778888887 9999999998753 


Q ss_pred             HHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          249 VKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       249 ~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                       +.+.++++   ++|+||||+|+. .++.++++++++|+++
T Consensus       236 -~~~~~~~~---g~D~vid~~g~~~~~~~~~~~l~~~G~iv  272 (357)
T 2cf5_A          236 -AKMSELAD---SLDYVIDTVPVHHALEPYLSLLKLDGKLI  272 (357)
T ss_dssp             -HHHHHSTT---TEEEEEECCCSCCCSHHHHTTEEEEEEEE
T ss_pred             -HHHHHhcC---CCCEEEECCCChHHHHHHHHHhccCCEEE
Confidence             45566553   399999999986 4699999999999985

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=2.7e-41  Score=301.83  Aligned_cols=228  Identities=21%  Similarity=0.178  Sum_probs=201.6

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccceEEEEEEecCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      ||++++++++.+   +++++.|.|++.++||+|||.++++|++|++.+.|.++.  ...+|.++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2dq4_A            1 MRALAKLAPEEG---LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVR   77 (343)
T ss_dssp             CEEEEECSSSSS---CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CeEEEEeCCCCc---EEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCC
Confidence            799999998864   788999999999999999999999999999999886431  125689999999999999999999


Q ss_pred             CCCCCCEEEecC--------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007          126 RLAPGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (288)
Q Consensus       126 ~~~~Gd~V~~~~--------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~  179 (288)
                      +|++||+|++.+                          ...|+|+||+++|++.++++|+++++++|+.+. ++.|||++
T Consensus        78 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~  156 (343)
T 2dq4_A           78 RPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILE-PFGNAVHT  156 (343)
T ss_dssp             SSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHH-HHHHHHHH
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhhh-HHHHHHHH
Confidence            999999999853                          125899999999999999999999999998874 77899999


Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhc
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLA  257 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~  257 (288)
                      +.+.+++ +|++|||+|+ |++|++++|+|+.+|+ +|++++    .+++++++++++ +++++++++.+ .+.+++++ 
T Consensus       157 l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~----~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~-  228 (343)
T 2dq4_A          157 VYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSD----PNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-  228 (343)
T ss_dssp             HHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEEC----SCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHH-
T ss_pred             HHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHh-HHhccCcCccCHHHHHHHhc-
Confidence            9756889 9999999999 9999999999999999 899988    588999999999 99999987644 46777777 


Q ss_pred             CCCCccEEEECCCc-ccHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGG-NSASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~v  288 (288)
                      +.+ +|++|||+|+ ..++.++++|+++|+++
T Consensus       229 ~~g-~D~vid~~g~~~~~~~~~~~l~~~G~iv  259 (343)
T 2dq4_A          229 GSG-VEVLLEFSGNEAAIHQGLMALIPGGEAR  259 (343)
T ss_dssp             SSC-EEEEEECSCCHHHHHHHHHHEEEEEEEE
T ss_pred             CCC-CCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            555 9999999998 45599999999999985

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-41  Score=302.58  Aligned_cols=234  Identities=21%  Similarity=0.211  Sum_probs=197.8

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      .+||++++++++.+ ..+++++.|.|++.++||+|||.++++|++|++.+.|.++....+|.++|||++|+|++.  +++
T Consensus         2 ~~mka~~~~~~g~~-~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~   78 (328)
T 1xa0_A            2 SAFQAFVVNKTETE-FTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHP   78 (328)
T ss_dssp             CEEEEEEEEEETTE-EEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSS
T ss_pred             CcceEEEEecCCCc-ceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCC
Confidence            36899999998743 237889999999999999999999999999999988765443457899999999999995  568


Q ss_pred             CCCCCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHh--hcCCCCCC-eEEEeCC
Q 023007          126 RLAPGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED--FTTLNSGD-SIVQNGA  197 (288)
Q Consensus       126 ~~~~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~-~vlI~g~  197 (288)
                      +|++||+|++...     ..|+|+||+++|++.++++|+++++++|+++++++.|||++++.  ..++++|+ +|||+|+
T Consensus        79 ~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga  158 (328)
T 1xa0_A           79 RFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGA  158 (328)
T ss_dssp             SCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESST
T ss_pred             CCCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecC
Confidence            8999999997631     25899999999999999999999999999999999999988763  36789996 9999999


Q ss_pred             CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHH
Q 023007          198 TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKV  277 (288)
Q Consensus       198 ~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a  277 (288)
                      +|++|++++|+|+.+|++|++++    .+++++++++++|+++++|+++...+.+.+++++  ++|++|||+|++.++.+
T Consensus       159 ~G~vG~~~~q~a~~~Ga~vi~~~----~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~--~~d~vid~~g~~~~~~~  232 (328)
T 1xa0_A          159 TGGVGSLAVSMLAKRGYTVEAST----GKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQ--RWAAAVDPVGGRTLATV  232 (328)
T ss_dssp             TSHHHHHHHHHHHHTTCCEEEEE----SCTTCHHHHHHTTCSEEEECC---------CCSC--CEEEEEECSTTTTHHHH
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCC--cccEEEECCcHHHHHHH
Confidence            99999999999999999999998    5678889999999999999876432334444443  49999999999878999


Q ss_pred             HhhccCCCeeC
Q 023007          278 LKFLRFREEQW  288 (288)
Q Consensus       278 ~~~l~~~G~~v  288 (288)
                      +++++++|+++
T Consensus       233 ~~~l~~~G~~v  243 (328)
T 1xa0_A          233 LSRMRYGGAVA  243 (328)
T ss_dssp             HHTEEEEEEEE
T ss_pred             HHhhccCCEEE
Confidence            99999999985

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=6.1e-41  Score=305.24  Aligned_cols=228  Identities=21%  Similarity=0.190  Sum_probs=202.3

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCC-CC-----CeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEe
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEV-KE-----NDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~-~~-----~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~  120 (288)
                      +||++++++++.    +++++.|.|++ .+     +||+|||.+++||++|++++.|.++  ..+|.++|||++|+|+++
T Consensus         2 ~MkA~~~~~~~~----l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~--~~~p~v~GhE~~G~V~~v   75 (398)
T 2dph_A            2 GNKSVVYHGTRD----LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI--VPKGHVLGHEITGEVVEK   75 (398)
T ss_dssp             CEEEEEEEETTE----EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC--CCTTCBCCCCEEEEEEEE
T ss_pred             ccEEEEEEcCCC----EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC--CCCCcccCCceEEEEEEE
Confidence            689999998764    88999999987 68     9999999999999999999988643  256899999999999999


Q ss_pred             cCCCCCCCCCCEEEecC-------------------------------------CCCcccceEEEeeCC--cEEEcCCCC
Q 023007          121 GSAVTRLAPGDWVIPSP-------------------------------------PSSGTWQSYVVKDQS--VWHKVSKDS  161 (288)
Q Consensus       121 G~~~~~~~~Gd~V~~~~-------------------------------------~~~G~~a~~~~~~~~--~l~~ip~~~  161 (288)
                      |+++++|++||+|++.+                                     ...|+|+||++++.+  .++++|+++
T Consensus        76 G~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~  155 (398)
T 2dph_A           76 GSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKE  155 (398)
T ss_dssp             CTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHH
T ss_pred             CCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCC
Confidence            99999999999999642                                     125899999999987  899999999


Q ss_pred             Chhh----hcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhC
Q 023007          162 PMEY----AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGL  236 (288)
Q Consensus       162 ~~~~----aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~  236 (288)
                      ++++    +++++.++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++    .+++++++++++
T Consensus       156 ~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~a~~l  229 (398)
T 2dph_A          156 QAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGD----QNPERLKLLSDA  229 (398)
T ss_dssp             HHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEE----SCHHHHHHHHTT
T ss_pred             ChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc----CCHHHHHHHHHc
Confidence            9998    899999999999999 5689999999999997 9999999999999999 888887    689999999999


Q ss_pred             CCCEEEeCCccc--HHHHHHHhcCCCCccEEEECCCcc---------------cHHHHHhhccCCCeeC
Q 023007          237 GADEVFTESQLE--VKNVKGLLANLPEPALGFNCVGGN---------------SASKVLKFLRFREEQW  288 (288)
Q Consensus       237 g~~~v~~~~~~~--~~~i~~~~~~~g~~D~v~d~~g~~---------------~~~~a~~~l~~~G~~v  288 (288)
                      |++ ++++++.+  .+.+++++++.+ +|+||||+|+.               .++.++++|+++|+++
T Consensus       230 Ga~-~i~~~~~~~~~~~~~~~~~g~g-~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv  296 (398)
T 2dph_A          230 GFE-TIDLRNSAPLRDQIDQILGKPE-VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIG  296 (398)
T ss_dssp             TCE-EEETTSSSCHHHHHHHHHSSSC-EEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEE
T ss_pred             CCc-EEcCCCcchHHHHHHHHhCCCC-CCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEE
Confidence            995 88886543  577888888766 99999999986               3589999999999985

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=2.9e-42  Score=306.51  Aligned_cols=236  Identities=21%  Similarity=0.239  Sum_probs=200.6

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      |+.+||++++++++.+ ..+++++.|.|++.++||+|||.++++|++|++.+.|.++....+|.++|||++|+|+++  +
T Consensus         1 m~~~mka~~~~~~g~~-~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~   77 (330)
T 1tt7_A            1 MSTLFQALQAEKNADD-VSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--N   77 (330)
T ss_dssp             -CCEEEEEEECCGGGS-CCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--S
T ss_pred             CCCcceEEEEecCCCC-cceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--C
Confidence            5678999999998743 238899999999999999999999999999999998865544467899999999999995  5


Q ss_pred             CCCCCCCCEEEecCC-----CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHh--hcCCCCCC-eEEEe
Q 023007          124 VTRLAPGDWVIPSPP-----SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED--FTTLNSGD-SIVQN  195 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~-----~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~-~vlI~  195 (288)
                      +++|++||+|++...     ..|+|+||+++|++.++++|+++++++|++++.++.|||++++.  ..++++|+ +|||+
T Consensus        78 v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~  157 (330)
T 1tt7_A           78 DPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVT  157 (330)
T ss_dssp             STTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEE
T ss_pred             CCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEE
Confidence            688999999997631     36999999999999999999999999999999999999988763  36789996 99999


Q ss_pred             CCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHH
Q 023007          196 GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSAS  275 (288)
Q Consensus       196 g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~  275 (288)
                      |++|++|++++|+|+.+|++|++++    .+++++++++++|+++++|+++.+.+.+.+++++  ++|++|||+|++.++
T Consensus       158 Ga~G~vG~~~~q~a~~~Ga~vi~~~----~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~--~~d~vid~~g~~~~~  231 (330)
T 1tt7_A          158 GATGGVGGIAVSMLNKRGYDVVAST----GNREAADYLKQLGASEVISREDVYDGTLKALSKQ--QWQGAVDPVGGKQLA  231 (330)
T ss_dssp             STTSHHHHHHHHHHHHHTCCEEEEE----SSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCC--CEEEEEESCCTHHHH
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcC--CccEEEECCcHHHHH
Confidence            9999999999999999999999998    5678888999999999998654211112233333  499999999998779


Q ss_pred             HHHhhccCCCeeC
Q 023007          276 KVLKFLRFREEQW  288 (288)
Q Consensus       276 ~a~~~l~~~G~~v  288 (288)
                      .++++++++|+++
T Consensus       232 ~~~~~l~~~G~iv  244 (330)
T 1tt7_A          232 SLLSKIQYGGSVA  244 (330)
T ss_dssp             HHHTTEEEEEEEE
T ss_pred             HHHHhhcCCCEEE
Confidence            9999999999985

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=9.1e-41  Score=304.61  Aligned_cols=233  Identities=20%  Similarity=0.201  Sum_probs=198.7

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCC-CCCCeEEEEEeEEecChHHHHHHhCCC------CCCCCCCcccccceEEEEE
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVE-VKENDVCVKMLAAPINPSDINRIEGVY------PVRPKVPAVGGYEGVGEVY  118 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~-~~~~evlI~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~  118 (288)
                      .+|++.++...+    .+++++.|.|+ +.++||+|||.+++||++|++++.|..      +....+|.++|||++|+|+
T Consensus        29 ~~m~a~~~~~~~----~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~  104 (404)
T 3ip1_A           29 LTWLGSKVWRYP----EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVV  104 (404)
T ss_dssp             BBSCGGGTEEEE----EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEE
T ss_pred             hhcceEEEEeCC----ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEE
Confidence            344444444443    28999999999 999999999999999999999987642      2223678999999999999


Q ss_pred             EecCCC------CCCCCCCEEEecC--------------------------CCCcccceEEEeeCCcEEEcCCCCC----
Q 023007          119 SVGSAV------TRLAPGDWVIPSP--------------------------PSSGTWQSYVVKDQSVWHKVSKDSP----  162 (288)
Q Consensus       119 ~~G~~~------~~~~~Gd~V~~~~--------------------------~~~G~~a~~~~~~~~~l~~ip~~~~----  162 (288)
                      ++|+++      ++|++||+|++.+                          ...|+|+||+++|.+.++++|++++    
T Consensus       105 ~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~  184 (404)
T 3ip1_A          105 EAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEG  184 (404)
T ss_dssp             EECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTBCT
T ss_pred             EECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEecccccccccc
Confidence            999999      8899999999853                          1269999999999999999999886    


Q ss_pred             --hhhhcccccchHHHHHHHHhh-cCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCC
Q 023007          163 --MEYAATIIVNPLTALRMLEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGA  238 (288)
Q Consensus       163 --~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~  238 (288)
                        ..++++++.+++|||+++... +++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .+++++++++++|+
T Consensus       185 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~----~~~~~~~~~~~lGa  259 (404)
T 3ip1_A          185 DRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSE----PSEVRRNLAKELGA  259 (404)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCHHHHHHHHHHTC
T ss_pred             ccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEC----CCHHHHHHHHHcCC
Confidence              456888888999999999755 48999999999998 9999999999999999 777776    58999999999999


Q ss_pred             CEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcc--cHHHHHhhc----cCCCeeC
Q 023007          239 DEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGN--SASKVLKFL----RFREEQW  288 (288)
Q Consensus       239 ~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~--~~~~a~~~l----~~~G~~v  288 (288)
                      ++++++++.+ .+.+++++++.| +|+||||+|++  ..+.++++|    +++|+++
T Consensus       260 ~~vi~~~~~~~~~~i~~~t~g~g-~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv  315 (404)
T 3ip1_A          260 DHVIDPTKENFVEAVLDYTNGLG-AKLFLEATGVPQLVWPQIEEVIWRARGINATVA  315 (404)
T ss_dssp             SEEECTTTSCHHHHHHHHTTTCC-CSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEE
T ss_pred             CEEEcCCCCCHHHHHHHHhCCCC-CCEEEECCCCcHHHHHHHHHHHHhccCCCcEEE
Confidence            9999987654 578999998877 99999999998  446777777    9999985

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2e-40  Score=298.88  Aligned_cols=230  Identities=21%  Similarity=0.270  Sum_probs=199.5

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      ...+|+++...++++   .+++++.|.|++.++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|++
T Consensus        19 ~~~~~~a~~~~~~~~---~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~   94 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQ---PLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVVAVGDQ   94 (369)
T ss_dssp             ----CEEEEBSSTTS---CCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEEEECTT
T ss_pred             cCceEEEEEEcCCCC---CcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCC-CCCCeecccCceEEEEEECCC
Confidence            355789999876654   3899999999999999999999999999999999886543 356899999999999999999


Q ss_pred             CCCCCCCCEEEecC-----------------------------------CCCcccceEEEeeCCcEEEcCCC-CChhhhc
Q 023007          124 VTRLAPGDWVIPSP-----------------------------------PSSGTWQSYVVKDQSVWHKVSKD-SPMEYAA  167 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~-----------------------------------~~~G~~a~~~~~~~~~l~~ip~~-~~~~~aa  167 (288)
                      +++|++||+|++.+                                   ...|+|+||+++|.+.++++|++ +++++|+
T Consensus        95 V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa  174 (369)
T 1uuf_A           95 VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVA  174 (369)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHG
T ss_pred             CCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhh
Confidence            99999999998632                                   12589999999999999999999 9999999


Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL  247 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~  247 (288)
                      .++.+++|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|++++    .+++++++++++|+++++++++.
T Consensus       175 ~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~----~~~~~~~~a~~lGa~~vi~~~~~  248 (369)
T 1uuf_A          175 PLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFT----TSEAKREAAKALGADEVVNSRNA  248 (369)
T ss_dssp             GGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SSGGGHHHHHHHTCSEEEETTCH
T ss_pred             hhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCcEEeccccH
Confidence            999999999999987 68999999999998 9999999999999999998888    57899999999999999998764


Q ss_pred             cHHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          248 EVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      +  .+.+.. +  ++|++|||+|++ .++.++++|+++|+++
T Consensus       249 ~--~~~~~~-~--g~Dvvid~~g~~~~~~~~~~~l~~~G~iv  285 (369)
T 1uuf_A          249 D--EMAAHL-K--SFDFILNTVAAPHNLDDFTTLLKRDGTMT  285 (369)
T ss_dssp             H--HHHTTT-T--CEEEEEECCSSCCCHHHHHTTEEEEEEEE
T ss_pred             H--HHHHhh-c--CCCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence            3  233333 2  499999999987 4699999999999985

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-40  Score=303.11  Aligned_cols=228  Identities=20%  Similarity=0.157  Sum_probs=200.1

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCC-CCe------EEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEE
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVK-END------VCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYS  119 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~-~~e------vlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~  119 (288)
                      +||++++++++.    +++++.|.|++. ++|      |+|||.+++||++|++++.|.++.  .+|.++|||++|+|++
T Consensus         2 ~Mka~~~~~~~~----l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~p~v~GhE~~G~V~~   75 (398)
T 1kol_A            2 GNRGVVYLGSGK----VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA--QVGLVLGHEITGEVIE   75 (398)
T ss_dssp             CEEEEEEEETTE----EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC--CTTCBCCCCEEEEEEE
T ss_pred             ccEEEEEecCCc----eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCCC--CCCcccCcccEEEEEE
Confidence            689999998764    889999999986 888      999999999999999999886532  4689999999999999


Q ss_pred             ecCCCCCCCCCCEEEecC------------------------------------CCCcccceEEEeeCC--cEEEcCCCC
Q 023007          120 VGSAVTRLAPGDWVIPSP------------------------------------PSSGTWQSYVVKDQS--VWHKVSKDS  161 (288)
Q Consensus       120 ~G~~~~~~~~Gd~V~~~~------------------------------------~~~G~~a~~~~~~~~--~l~~ip~~~  161 (288)
                      +|+++++|++||+|+..+                                    ...|+|+||+++|.+  .++++|+++
T Consensus        76 vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~  155 (398)
T 1kol_A           76 KGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRD  155 (398)
T ss_dssp             ECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHH
T ss_pred             ECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCc
Confidence            999999999999998531                                    124899999999986  899999999


Q ss_pred             Chhh----hcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhC
Q 023007          162 PMEY----AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGL  236 (288)
Q Consensus       162 ~~~~----aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~  236 (288)
                      ++.+    +++++.++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.    .+++++++++++
T Consensus       156 ~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~----~~~~~~~~a~~l  229 (398)
T 1kol_A          156 KAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGD----LNPARLAHAKAQ  229 (398)
T ss_dssp             HHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEE----SCHHHHHHHHHT
T ss_pred             chhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEc----CCHHHHHHHHHc
Confidence            9888    7889989999999997 589999999999996 9999999999999999 577776    589999999999


Q ss_pred             CCCEEEeCCcc--cHHHHHHHhcCCCCccEEEECCCcc----------------cHHHHHhhccCCCeeC
Q 023007          237 GADEVFTESQL--EVKNVKGLLANLPEPALGFNCVGGN----------------SASKVLKFLRFREEQW  288 (288)
Q Consensus       237 g~~~v~~~~~~--~~~~i~~~~~~~g~~D~v~d~~g~~----------------~~~~a~~~l~~~G~~v  288 (288)
                      |++ ++++.+.  ..+.+++++++.+ +|+||||+|++                .++.++++|+++|+++
T Consensus       230 Ga~-~i~~~~~~~~~~~v~~~t~g~g-~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv  297 (398)
T 1kol_A          230 GFE-IADLSLDTPLHEQIAALLGEPE-VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIG  297 (398)
T ss_dssp             TCE-EEETTSSSCHHHHHHHHHSSSC-EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEE
T ss_pred             CCc-EEccCCcchHHHHHHHHhCCCC-CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEE
Confidence            997 7887653  3578888888766 99999999986                3589999999999974

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3.5e-40  Score=295.02  Aligned_cols=230  Identities=23%  Similarity=0.281  Sum_probs=204.1

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCC-------CCCCCcccccceEEEEEEe
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-------RPKVPAVGGYEGVGEVYSV  120 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~-------~~~~p~~~G~e~~G~V~~~  120 (288)
                      ||++++++++.+   +++++.|.|++.++||+|||.++++|++|++++.|.++.       ...+|.++|||++|+|+++
T Consensus         1 Mka~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   77 (347)
T 1jvb_A            1 MRAVRLVEIGKP---LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (347)
T ss_dssp             CEEEEECSTTSC---CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEecCCCC---eEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEE
Confidence            799999998754   789999999999999999999999999999998875441       2357899999999999999


Q ss_pred             cCCCCCCCCCCEEEecCC--------------------------CCcccceEEEeeC-CcEEEcCCCCChhhhcccccch
Q 023007          121 GSAVTRLAPGDWVIPSPP--------------------------SSGTWQSYVVKDQ-SVWHKVSKDSPMEYAATIIVNP  173 (288)
Q Consensus       121 G~~~~~~~~Gd~V~~~~~--------------------------~~G~~a~~~~~~~-~~l~~ip~~~~~~~aa~l~~~~  173 (288)
                      |+++++|++||+|++.+.                          ..|+|+||+++|+ +.++++ +++++++|+.+++++
T Consensus        78 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~  156 (347)
T 1jvb_A           78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSG  156 (347)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHH
T ss_pred             CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhH
Confidence            999999999999987531                          2589999999999 999999 999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHH
Q 023007          174 LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKN  251 (288)
Q Consensus       174 ~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~  251 (288)
                      .|||+++.+ +++++|++|||+|++|++|++++|+++.. |++|+++.    .++++.+.++++|+++++++.+.. .+.
T Consensus       157 ~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~  231 (347)
T 1jvb_A          157 ITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD----VREEAVEAAKRAGADYVINASMQDPLAE  231 (347)
T ss_dssp             HHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEE----SSHHHHHHHHHHTCSEEEETTTSCHHHH
T ss_pred             HHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEc----CCHHHHHHHHHhCCCEEecCCCccHHHH
Confidence            999999975 89999999999999779999999999999 99999888    578999999999999999887643 456


Q ss_pred             HHHHhc-CCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          252 VKGLLA-NLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~-~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                      +.++++ +  ++|++|||+|+. .++.++++|+++|++|
T Consensus       232 ~~~~~~~~--~~d~vi~~~g~~~~~~~~~~~l~~~G~iv  268 (347)
T 1jvb_A          232 IRRITESK--GVDAVIDLNNSEKTLSVYPKALAKQGKYV  268 (347)
T ss_dssp             HHHHTTTS--CEEEEEESCCCHHHHTTGGGGEEEEEEEE
T ss_pred             HHHHhcCC--CceEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence            777776 4  499999999987 5589999999999985

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=9.6e-42  Score=333.32  Aligned_cols=257  Identities=24%  Similarity=0.257  Sum_probs=222.0

Q ss_pred             CchhhhhhhhhcccccccccchhhhhhhhhhhhhHhhhhhccCCCccceEEEEccCCCCCcceEEEEcCC--CCCCCCeE
Q 023007            1 MALARSVAVKLINRSISAASIFSLEWAGARRVQAQRVRAFSALMSPPSKAVVYEREGPPDSVIKMIELPP--VEVKENDV   78 (288)
Q Consensus         1 ~~~~~~~~~l~ipr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~--p~~~~~ev   78 (288)
                      .||+.-.+.+++||+.++....    . . .           ........+.+..+|.++ .+++++.+.  |+++++||
T Consensus       180 ~E~a~r~G~~~V~Rl~~~~~~~----~-~-~-----------~~~~~~~~l~~~~~G~~~-~L~~~~~~~p~~~~~~~eV  241 (795)
T 3slk_A          180 PQLALRRGGAHAPRLAGLGSDD----V-L-P-----------VPDGTGWRLEATRPGSLD-GLALVDEPTATAPLGDGEV  241 (795)
T ss_dssp             SEEEECSSCEECCEEEESCSSC----C-C-C-----------CCCSSSCCEEESSTTSST-TEEECCCHHHHSCCCSSEE
T ss_pred             ceEEEECCcEEEeeeecccccc----c-c-C-----------CCCCceEEEecCCCCCcc-ceEEEeCCccCCCCCCCEE
Confidence            3678889999999999876541    0 0 0           011223567778888765 488888764  56899999


Q ss_pred             EEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcC
Q 023007           79 CVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVS  158 (288)
Q Consensus        79 lI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip  158 (288)
                      +|||.++|||++|++++.|.++.    |.++|||++|+|+++|+++++|++||+|+++.  .|+|++|++++.+.++++|
T Consensus       242 lV~V~a~gin~~D~~~~~G~~~~----~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~--~G~~ae~~~v~~~~~~~iP  315 (795)
T 3slk_A          242 RIAMRAAGVNFRDALIALGMYPG----VASLGSEGAGVVVETGPGVTGLAPGDRVMGMI--PKAFGPLAVADHRMVTRIP  315 (795)
T ss_dssp             EEEEEEEEECHHHHHHTTTCCSS----CCCSCCCEEEEEEEECSSCCSSCTTCEEEECC--SSCSSSEEEEETTSEEECC
T ss_pred             EEEEEEEccCHHHHHHHcCCCCC----CccccceeEEEEEEeCCCCCcCCCCCEEEEEe--cCCCcCEEEeehHHEEECC
Confidence            99999999999999999887654    56799999999999999999999999999885  5899999999999999999


Q ss_pred             CCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC
Q 023007          159 KDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA  238 (288)
Q Consensus       159 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~  238 (288)
                      +++++++|++++.+++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++|++++    .++ +.+.++ +|.
T Consensus       316 ~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~----~~~-k~~~l~-lga  389 (795)
T 3slk_A          316 AGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA----SED-KWQAVE-LSR  389 (795)
T ss_dssp             TTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEEC----CGG-GGGGSC-SCG
T ss_pred             CCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEe----ChH-Hhhhhh-cCh
Confidence            99999999999999999999998889999999999999999999999999999999999987    233 555555 999


Q ss_pred             CEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          239 DEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       239 ~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      ++++++++. +.+.+++.|++.| +|+||||+|++.++.++++|+++|+||
T Consensus       390 ~~v~~~~~~~~~~~i~~~t~g~G-vDvVld~~gg~~~~~~l~~l~~~Gr~v  439 (795)
T 3slk_A          390 EHLASSRTCDFEQQFLGATGGRG-VDVVLNSLAGEFADASLRMLPRGGRFL  439 (795)
T ss_dssp             GGEECSSSSTHHHHHHHHSCSSC-CSEEEECCCTTTTHHHHTSCTTCEEEE
T ss_pred             hheeecCChhHHHHHHHHcCCCC-eEEEEECCCcHHHHHHHHHhcCCCEEE
Confidence            999998765 4578899999887 999999999988899999999999985

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.3e-39  Score=293.37  Aligned_cols=228  Identities=21%  Similarity=0.243  Sum_probs=195.3

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++.+...+.+ ..++++++|.|++.++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus        15 mk~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~   92 (366)
T 1yqd_A           15 VKAFGWAARDQS-GHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF-SMYPLVPGHEIVGEVTEVGSKVKKV   92 (366)
T ss_dssp             EEEEEEEECSTT-CCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC-CCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             eeEEEEEEcCCC-CCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC-CCCCEecccceEEEEEEECCCCCcC
Confidence            444444433332 23889999999999999999999999999999999886543 3578999999999999999999999


Q ss_pred             CCCCEEEecC----------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccch
Q 023007          128 APGDWVIPSP----------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNP  173 (288)
Q Consensus       128 ~~Gd~V~~~~----------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~  173 (288)
                      ++||+|++.+                                  ...|+|+||+++|.+.++++|+++++++|+.++.++
T Consensus        93 ~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~  172 (366)
T 1yqd_A           93 NVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAG  172 (366)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHH
T ss_pred             CCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhH
Confidence            9999998532                                  135899999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCCC-CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHH
Q 023007          174 LTALRMLEDFTTLN-SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKN  251 (288)
Q Consensus       174 ~ta~~~l~~~~~~~-~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~  251 (288)
                      .|||+++.+ .+++ +|++|||+|+ |++|++++|+|+.+|++|++++    .++++++.++ ++|+++++++.+.  +.
T Consensus       173 ~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~----~~~~~~~~~~~~lGa~~v~~~~~~--~~  244 (366)
T 1yqd_A          173 ITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVIS----TSPSKKEEALKNFGADSFLVSRDQ--EQ  244 (366)
T ss_dssp             HHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCGGGHHHHHHTSCCSEEEETTCH--HH
T ss_pred             HHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhcCCceEEeccCH--HH
Confidence            999999976 5777 9999999997 9999999999999999999988    5778888776 9999999998763  35


Q ss_pred             HHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          252 VKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +.++++   ++|+||||+|+.. ++.++++|+++|+++
T Consensus       245 ~~~~~~---~~D~vid~~g~~~~~~~~~~~l~~~G~iv  279 (366)
T 1yqd_A          245 MQAAAG---TLDGIIDTVSAVHPLLPLFGLLKSHGKLI  279 (366)
T ss_dssp             HHHTTT---CEEEEEECCSSCCCSHHHHHHEEEEEEEE
T ss_pred             HHHhhC---CCCEEEECCCcHHHHHHHHHHHhcCCEEE
Confidence            666553   3999999999864 699999999999985

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=8.8e-41  Score=302.23  Aligned_cols=231  Identities=23%  Similarity=0.317  Sum_probs=201.1

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC------------------------
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP------------------------  100 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~------------------------  100 (288)
                      +.+||+++......   .+++++.|.|++.++||+|||.+++||++|++++.|..+                        
T Consensus         5 ~~~mka~v~~~~~~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~   81 (379)
T 3iup_A            5 ALQLRSRIKSSGEL---ELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAM   81 (379)
T ss_dssp             EEEEEEEECTTSEE---EEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHH
T ss_pred             hhhHHHHHhcCCCC---ceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccc
Confidence            34689888764332   389999999999999999999999999999999988521                        


Q ss_pred             ----CCCCCCcccccceEEEEEEecCCC-CCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHH
Q 023007          101 ----VRPKVPAVGGYEGVGEVYSVGSAV-TRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT  175 (288)
Q Consensus       101 ----~~~~~p~~~G~e~~G~V~~~G~~~-~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~t  175 (288)
                          ....+|.++|||++|+|+++|+++ ++|++||+|++..  .|+|+||+++|++.++++|+++++++|+++++.++|
T Consensus        82 ~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~--~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t  159 (379)
T 3iup_A           82 RSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG--GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLT  159 (379)
T ss_dssp             HHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC--SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHH
T ss_pred             cccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC--CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHH
Confidence                012468899999999999999999 8899999999986  489999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCeEEEeC-CCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHH
Q 023007          176 ALRMLEDFTTLNSGDSIVQNG-ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVK  253 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~g-~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~  253 (288)
                      ||+++... . ++|++|||+| ++|++|++++|+|+.+|++|++++    .+++++++++++|+++++|+++.+ .+.++
T Consensus       160 a~~~~~~~-~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~----~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~  233 (379)
T 3iup_A          160 ALGMVETM-R-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIV----RKQEQADLLKAQGAVHVCNAASPTFMQDLT  233 (379)
T ss_dssp             HHHHHHHH-H-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEE----SSHHHHHHHHHTTCSCEEETTSTTHHHHHH
T ss_pred             HHHHHHHh-c-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHhCCCcEEEeCCChHHHHHHH
Confidence            99887664 4 8999999996 779999999999999999999998    689999999999999999987654 57888


Q ss_pred             HHhcCCCCccEEEECCCcccH-HHHHhhcc-----CCCee
Q 023007          254 GLLANLPEPALGFNCVGGNSA-SKVLKFLR-----FREEQ  287 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~-----~~G~~  287 (288)
                      +++++.+ +|++|||+|++.. +.++++++     ++|++
T Consensus       234 ~~t~~~g-~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~  272 (379)
T 3iup_A          234 EALVSTG-ATIAFDATGGGKLGGQILTCMEAALNKSAREY  272 (379)
T ss_dssp             HHHHHHC-CCEEEESCEEESHHHHHHHHHHHHHHTTCCSC
T ss_pred             HHhcCCC-ceEEEECCCchhhHHHHHHhcchhhhccccce
Confidence            8888766 9999999999766 88888884     56554

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.8e-39  Score=289.20  Aligned_cols=229  Identities=23%  Similarity=0.277  Sum_probs=199.7

Q ss_pred             ccceEEEEccC--CCC-CcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccc----eEEEEE
Q 023007           46 PPSKAVVYERE--GPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYE----GVGEVY  118 (288)
Q Consensus        46 ~~~~a~~~~~~--g~~-~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e----~~G~V~  118 (288)
                      .+||+|+++..  |.+ .+.+++++.|.|++.++||+|||.+++||++|+..+.+....  ..|.++|||    ++|+|+
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~~--~~p~~~G~e~g~~~~G~V~   83 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSY--IPPVGIGEVMRALGVGKVL   83 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCCS--SCCCCTTSBCCCEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccccc--CCCCCCCcccCCceEEEEE
Confidence            46899999862  211 245999999999999999999999999999999888764332  346777777    899999


Q ss_pred             EecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhh--cccccchHHHHHHHHhhcCCCCCCeEEEeC
Q 023007          119 SVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYA--ATIIVNPLTALRMLEDFTTLNSGDSIVQNG  196 (288)
Q Consensus       119 ~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~a--a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g  196 (288)
                      +  +++++|++||+|++.    |+|+||+++|++.++++|+++++.++  ++++.+++|||+++.+.+++++|++|||+|
T Consensus        84 ~--~~v~~~~vGdrV~~~----G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~G  157 (336)
T 4b7c_A           84 V--SKHPGFQAGDYVNGA----LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISG  157 (336)
T ss_dssp             E--ECSTTCCTTCEEEEE----CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESS
T ss_pred             e--cCCCCCCCCCEEecc----CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEEC
Confidence            9  458899999999974    79999999999999999999977776  788999999999998889999999999999


Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccH
Q 023007          197 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       197 ~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                      ++|++|++++|+++..|++|++++    .++++.+.+ +++|+++++|+.+.+ .+.+.+.+++  ++|++|||+|++.+
T Consensus       158 a~g~iG~~~~~~a~~~Ga~Vi~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~d~vi~~~g~~~~  231 (336)
T 4b7c_A          158 AAGAVGSVAGQIARLKGCRVVGIA----GGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPK--GIDVFFDNVGGEIL  231 (336)
T ss_dssp             TTSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTT--CEEEEEESSCHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCC--CceEEEECCCcchH
Confidence            999999999999999999999998    588999998 899999999987654 4677777754  49999999999878


Q ss_pred             HHHHhhccCCCeeC
Q 023007          275 SKVLKFLRFREEQW  288 (288)
Q Consensus       275 ~~a~~~l~~~G~~v  288 (288)
                      +.++++++++|+++
T Consensus       232 ~~~~~~l~~~G~iv  245 (336)
T 4b7c_A          232 DTVLTRIAFKARIV  245 (336)
T ss_dssp             HHHHTTEEEEEEEE
T ss_pred             HHHHHHHhhCCEEE
Confidence            99999999999985

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=2.1e-40  Score=297.59  Aligned_cols=223  Identities=19%  Similarity=0.182  Sum_probs=194.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCC---CcccccceEEEEEEecCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV---PAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~---p~~~G~e~~G~V~~~G~~~  124 (288)
                      ||++++++++.+   +++++.|.|++.++||+|||.+++||++|++++.|.++. ..+   |.++|||++| |+++|++ 
T Consensus         1 MkA~~~~~~~~~---l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E~~G-V~~vG~~-   74 (357)
T 2b5w_A            1 MKAIAVKRGEDR---PVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHEAVG-VVVDPND-   74 (357)
T ss_dssp             CEEEEEETTCSS---CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSEEEE-EEEECTT-
T ss_pred             CeEEEEeCCCCc---eEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCceeEE-EEEECCC-
Confidence            799999988763   789999999999999999999999999999999987553 245   8899999999 9999999 


Q ss_pred             CCCCCCCEEEecC-------------------------------CCCcccceEEEeeCCcEEEcCCCCChhhhcccccch
Q 023007          125 TRLAPGDWVIPSP-------------------------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNP  173 (288)
Q Consensus       125 ~~~~~Gd~V~~~~-------------------------------~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~  173 (288)
                      ++|++||+|++.+                               ...|+|+||+++|++.++++|++++ ++ ++++.++
T Consensus        75 ~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-aal~~~~  152 (357)
T 2b5w_A           75 TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-GFLIEPI  152 (357)
T ss_dssp             SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TT-GGGHHHH
T ss_pred             CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hh-hhhhchH
Confidence            9999999999862                               1148999999999999999999999 54 5577799


Q ss_pred             HHHHHHHHhhcCCCCC------CeEEEeCCCChHHHHH-HHHH-HHcCCe-EEEEEcCCCCCHH---HHHHHHhCCCCEE
Q 023007          174 LTALRMLEDFTTLNSG------DSIVQNGATSIVGQCI-IQIA-RHRGIH-SINIIRDRAGSDE---AKEKLKGLGADEV  241 (288)
Q Consensus       174 ~ta~~~l~~~~~~~~g------~~vlI~g~~g~vG~~a-~~la-~~~g~~-vi~~~~~~~~~~~---~~~~~~~~g~~~v  241 (288)
                      .|||+++ +.+++++|      ++|||+|+ |++|+++ +|+| +.+|++ |++++    .+++   ++++++++|++++
T Consensus       153 ~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~----~~~~~~~~~~~~~~lGa~~v  226 (357)
T 2b5w_A          153 SITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLG----RRDRPDPTIDIIEELDATYV  226 (357)
T ss_dssp             HHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEE----CCCSSCHHHHHHHHTTCEEE
T ss_pred             HHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEe----CCcccHHHHHHHHHcCCccc
Confidence            9999999 45889999      99999999 9999999 9999 999998 88888    4666   8899999999999


Q ss_pred             EeCCcccHHHHHHHhcCCCCccEEEECCCcc-cHHHHHhhccCCCeeC
Q 023007          242 FTESQLEVKNVKGLLANLPEPALGFNCVGGN-SASKVLKFLRFREEQW  288 (288)
Q Consensus       242 ~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~-~~~~a~~~l~~~G~~v  288 (288)
                       ++++.++..++++ ++ + +|+||||+|+. .++.++++++++|+++
T Consensus       227 -~~~~~~~~~i~~~-~g-g-~Dvvid~~g~~~~~~~~~~~l~~~G~iv  270 (357)
T 2b5w_A          227 -DSRQTPVEDVPDV-YE-Q-MDFIYEATGFPKHAIQSVQALAPNGVGA  270 (357)
T ss_dssp             -ETTTSCGGGHHHH-SC-C-EEEEEECSCCHHHHHHHHHHEEEEEEEE
T ss_pred             -CCCccCHHHHHHh-CC-C-CCEEEECCCChHHHHHHHHHHhcCCEEE
Confidence             8876443227777 65 4 99999999987 4599999999999985

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=2.1e-39  Score=291.10  Aligned_cols=234  Identities=23%  Similarity=0.274  Sum_probs=201.4

Q ss_pred             CCCccceEEEE-ccC---CCC-CcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhC----CCCCCCCCCcccccc
Q 023007           43 LMSPPSKAVVY-ERE---GPP-DSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEG----VYPVRPKVPAVGGYE  112 (288)
Q Consensus        43 ~~~~~~~a~~~-~~~---g~~-~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g----~~~~~~~~p~~~G~e  112 (288)
                      .++.+||++++ +.+   |.+ ...+++++.|.|++ .++||+|||.++++|++|++.+.+    .+.....+|.++|||
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E   83 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG   83 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcccccc
Confidence            45678999999 565   443 24589999999998 999999999999999999987765    232223568899999


Q ss_pred             eEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCC-----ChhhhcccccchHHHHHHHHhhcCCC
Q 023007          113 GVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDS-----PMEYAATIIVNPLTALRMLEDFTTLN  187 (288)
Q Consensus       113 ~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~-----~~~~aa~l~~~~~ta~~~l~~~~~~~  187 (288)
                      ++|+|++  +++++|++||+|++.   .|+|+||++++.+.++++|+++     +++ +++++.+++|||+++.+.++++
T Consensus        84 ~~G~V~~--~~v~~~~vGdrV~~~---~G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~  157 (357)
T 2zb4_A           84 GIGIIEE--SKHTNLTKGDFVTSF---YWPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHIT  157 (357)
T ss_dssp             EEEEEEE--ECSTTCCTTCEEEEE---EEESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCC
T ss_pred             EEEEEEe--cCCCCCCCCCEEEec---CCCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCC
Confidence            9999999  888999999999986   3899999999999999999999     555 7788889999999998889999


Q ss_pred             CC--CeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCccc-HHHHHHHhcCCCCc
Q 023007          188 SG--DSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLE-VKNVKGLLANLPEP  262 (288)
Q Consensus       188 ~g--~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~-~~~i~~~~~~~g~~  262 (288)
                      +|  ++|||+|++|++|++++|+++..|+ +|++++    .++++.+.+++ +|+++++|+.+.. .+.+.+.+++ + +
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~----~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~-~  231 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGIC----GTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPA-G-V  231 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEE----SCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTT-C-E
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEe----CCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCC-C-C
Confidence            99  9999999999999999999999999 999988    57888888876 9999999987644 4677777776 4 9


Q ss_pred             cEEEECCCcccHHHHHhhccCCCeeC
Q 023007          263 ALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       263 D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      |++|||+|+..++.++++++++|+++
T Consensus       232 d~vi~~~G~~~~~~~~~~l~~~G~iv  257 (357)
T 2zb4_A          232 DVYFDNVGGNISDTVISQMNENSHII  257 (357)
T ss_dssp             EEEEESCCHHHHHHHHHTEEEEEEEE
T ss_pred             CEEEECCCHHHHHHHHHHhccCcEEE
Confidence            99999999877799999999999975

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=4.7e-38  Score=276.04  Aligned_cols=213  Identities=26%  Similarity=0.295  Sum_probs=189.3

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++++++.+   ..+++.|.|+++++||+|||.++++|++|++++.|.++....+|.++|||++|+|+         
T Consensus         1 Mka~~~~~~g~~---~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~---------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGP---LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE---------   68 (302)
T ss_dssp             CEEEEECSTTSC---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET---------
T ss_pred             CeEEEEcCCCCc---hheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE---------
Confidence            799999998875   23558899999999999999999999999999998766544678999999999996         


Q ss_pred             CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHH
Q 023007          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQ  207 (288)
Q Consensus       128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~  207 (288)
                        ||+|++... .|+|+||+++|++.++++|+++++++|++++.+++|||+++.+.+ +++|++|+|+|++|++|++++|
T Consensus        69 --GdrV~~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~  144 (302)
T 1iz0_A           69 --GRRYAALVP-QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQ  144 (302)
T ss_dssp             --TEEEEEECS-SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHH
T ss_pred             --CcEEEEecC-CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHH
Confidence              999999864 599999999999999999999999999999999999999998777 9999999999999999999999


Q ss_pred             HHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-ccH-HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCC
Q 023007          208 IARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-LEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFRE  285 (288)
Q Consensus       208 la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G  285 (288)
                      +++..|++|++++    .++++++.++++|+++++++++ .+. +.+      . ++|++|| +|++.++.++++++++|
T Consensus       145 ~a~~~Ga~Vi~~~----~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~------~-~~d~vid-~g~~~~~~~~~~l~~~G  212 (302)
T 1iz0_A          145 VARAMGLRVLAAA----SRPEKLALPLALGAEEAATYAEVPERAKAW------G-GLDLVLE-VRGKEVEESLGLLAHGG  212 (302)
T ss_dssp             HHHHTTCEEEEEE----SSGGGSHHHHHTTCSEEEEGGGHHHHHHHT------T-SEEEEEE-CSCTTHHHHHTTEEEEE
T ss_pred             HHHHCCCEEEEEe----CCHHHHHHHHhcCCCEEEECCcchhHHHHh------c-CceEEEE-CCHHHHHHHHHhhccCC
Confidence            9999999999998    5788889999999999998865 332 222      2 4999999 99977799999999999


Q ss_pred             eeC
Q 023007          286 EQW  288 (288)
Q Consensus       286 ~~v  288 (288)
                      +++
T Consensus       213 ~~v  215 (302)
T 1iz0_A          213 RLV  215 (302)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            975

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.5e-37  Score=279.82  Aligned_cols=222  Identities=13%  Similarity=0.151  Sum_probs=188.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCC-CeEEEEEeEEecChHHHHHHhC--CCCCCCCC---CcccccceEEEEEEec
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKE-NDVCVKMLAAPINPSDINRIEG--VYPVRPKV---PAVGGYEGVGEVYSVG  121 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~-~evlI~v~~~~i~~~D~~~~~g--~~~~~~~~---p~~~G~e~~G~V~~~G  121 (288)
                      ||++++++++.+   +++++.|.|++.+ +||+|||.++++|++|++++.|  .++. ..+   |.++|||++|+|++  
T Consensus         1 MkA~~~~~~g~~---l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~~~~~p~v~G~E~~G~V~~--   74 (366)
T 2cdc_A            1 MKAIIVKPPNAG---VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLST-LPKGKDFLVLGHEAIGVVEE--   74 (366)
T ss_dssp             CEEEEECTTSCC---CEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSEEEEEECS--
T ss_pred             CeEEEEeCCCCc---eEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCC-CCcCCCCCcCCcceEEEEEe--
Confidence            799999998863   7889999999999 9999999999999999999988  5442 245   89999999999999  


Q ss_pred             CCCCCCCCCCEEEecC---------------------------C--CCcccceEEEeeCCcEEEcCCCCChhhhcccccc
Q 023007          122 SAVTRLAPGDWVIPSP---------------------------P--SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVN  172 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~---------------------------~--~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~  172 (288)
                      ++ ++|++||+|++.+                           .  ..|+|+||++++++.++++|++++ ++|+ ++.+
T Consensus        75 ~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~~~  151 (366)
T 2cdc_A           75 SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LAQP  151 (366)
T ss_dssp             CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GHHH
T ss_pred             CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hcCc
Confidence            66 8899999999753                           1  358999999999999999999999 7765 6678


Q ss_pred             hHHHHHHHH--h--hcCCC--C-------CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCH---HHHHHHHhC
Q 023007          173 PLTALRMLE--D--FTTLN--S-------GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSD---EAKEKLKGL  236 (288)
Q Consensus       173 ~~ta~~~l~--~--~~~~~--~-------g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~---~~~~~~~~~  236 (288)
                      +.|||+++.  +  .++++  +       |++|||+|+ |++|++++|+++.+|++|+++.    .++   ++.++++++
T Consensus       152 ~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~----~~~~~~~~~~~~~~~  226 (366)
T 2cdc_A          152 LADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMAN----RREPTEVEQTVIEET  226 (366)
T ss_dssp             HHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEE----SSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEe----CCccchHHHHHHHHh
Confidence            999999998  4  68888  8       999999999 9999999999999999999998    455   788899999


Q ss_pred             CCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcc-cH-HHHHhhccCCCeeC
Q 023007          237 GADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGN-SA-SKVLKFLRFREEQW  288 (288)
Q Consensus       237 g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~-~~-~~a~~~l~~~G~~v  288 (288)
                      |++++ | .+...+.+.+ +++  ++|++|||+|+. .+ +.++++|+++|++|
T Consensus       227 ga~~v-~-~~~~~~~~~~-~~~--~~d~vid~~g~~~~~~~~~~~~l~~~G~iv  275 (366)
T 2cdc_A          227 KTNYY-N-SSNGYDKLKD-SVG--KFDVIIDATGADVNILGNVIPLLGRNGVLG  275 (366)
T ss_dssp             TCEEE-E-CTTCSHHHHH-HHC--CEEEEEECCCCCTHHHHHHGGGEEEEEEEE
T ss_pred             CCcee-c-hHHHHHHHHH-hCC--CCCEEEECCCChHHHHHHHHHHHhcCCEEE
Confidence            99988 7 5533466666 553  499999999986 56 89999999999985

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.9e-36  Score=269.29  Aligned_cols=227  Identities=22%  Similarity=0.263  Sum_probs=193.0

Q ss_pred             CccceEEEEccC--CCC-CcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEec
Q 023007           45 SPPSKAVVYERE--GPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVG  121 (288)
Q Consensus        45 ~~~~~a~~~~~~--g~~-~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G  121 (288)
                      +.+||++++.+.  |.+ .+.+++++.|.|++.++||+|||.++++|+.|+. +..    ....|.++|||++|+|++. 
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~~----~~~~p~~~g~e~~G~Vv~~-   78 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-ASK----RLKEGAVMMGQQVARVVES-   78 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHH-HTT----TCCTTSBCCCCEEEEEEEE-
T ss_pred             cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHcc-ccC----cCCCCcccccceEEEEEec-
Confidence            457899999985  433 2458999999999999999999999999999873 221    1245788999999999994 


Q ss_pred             CCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCC----CChhh-hcccccchHHHHHHHHhhcCCCCCCeEEEeC
Q 023007          122 SAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKD----SPMEY-AATIIVNPLTALRMLEDFTTLNSGDSIVQNG  196 (288)
Q Consensus       122 ~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~----~~~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g  196 (288)
                       ++++|++||+|++.    |+|+||+++|.+.++++|++    +++.+ +++++.+++|||+++.+.+++++|++|+|+|
T Consensus        79 -~v~~~~vGdrV~~~----g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~G  153 (333)
T 1v3u_A           79 -KNSAFPAGSIVLAQ----SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSA  153 (333)
T ss_dssp             -SCTTSCTTCEEEEC----CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEES
T ss_pred             -CCCCCCCCCEEEec----CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEec
Confidence             67889999999975    79999999999999999997    88887 5889989999999998889999999999999


Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-cc-HHHHHHHhcCCCCccEEEECCCcccH
Q 023007          197 ATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-LE-VKNVKGLLANLPEPALGFNCVGGNSA  274 (288)
Q Consensus       197 ~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~-~~~i~~~~~~~g~~D~v~d~~g~~~~  274 (288)
                      ++|++|++++++++..|++|+++.    .++++.+.++++|++.++|..+ .. .+.+.+.+++  ++|++|||+|++.+
T Consensus       154 a~ggiG~~~~~~~~~~G~~V~~~~----~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~--~~d~vi~~~g~~~~  227 (333)
T 1v3u_A          154 AAGAVGSVVGQIAKLKGCKVVGAA----GSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPD--GYDCYFDNVGGEFL  227 (333)
T ss_dssp             TTBHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTT--CEEEEEESSCHHHH
T ss_pred             CCCcHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCC--CCeEEEECCChHHH
Confidence            999999999999999999999988    5788888889999999999875 43 4566666654  49999999999878


Q ss_pred             HHHHhhccCCCeeC
Q 023007          275 SKVLKFLRFREEQW  288 (288)
Q Consensus       275 ~~a~~~l~~~G~~v  288 (288)
                      +.++++++++|+++
T Consensus       228 ~~~~~~l~~~G~~v  241 (333)
T 1v3u_A          228 NTVLSQMKDFGKIA  241 (333)
T ss_dssp             HHHHTTEEEEEEEE
T ss_pred             HHHHHHHhcCCEEE
Confidence            99999999999985

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=5.2e-36  Score=267.68  Aligned_cols=233  Identities=20%  Similarity=0.194  Sum_probs=193.3

Q ss_pred             CCccceEEEEccC--CCCCc-ceEEE--EcCCCC-CCCCeEEEEEeEEecChHHHHHHhCCCCCC---CCCCcccccceE
Q 023007           44 MSPPSKAVVYERE--GPPDS-VIKMI--ELPPVE-VKENDVCVKMLAAPINPSDINRIEGVYPVR---PKVPAVGGYEGV  114 (288)
Q Consensus        44 ~~~~~~a~~~~~~--g~~~~-~~~~~--~~~~p~-~~~~evlI~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~e~~  114 (288)
                      ||.+||++++...  +.+.. .++++  +.+.|. ++++||+|||.++++|+.|. .+.|.+...   ...|.++|||++
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence            4567899988875  44442 48887  788886 89999999999999999885 344543211   135789999999


Q ss_pred             EEEEE--ecCCCCCCCCCCEEEecCCCCcccceEEEeeCCc--EEEcCC---CCChhhhcccccchHHHHHHHHhhcCCC
Q 023007          115 GEVYS--VGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSV--WHKVSK---DSPMEYAATIIVNPLTALRMLEDFTTLN  187 (288)
Q Consensus       115 G~V~~--~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~--l~~ip~---~~~~~~aa~l~~~~~ta~~~l~~~~~~~  187 (288)
                      |++++  +|+++++|++||+|++.    |+|+||++++.+.  ++++|+   +++++ +++++.+++|||+++.+.++++
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~~----g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~  154 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWGI----VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPK  154 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEEE----EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCC
T ss_pred             cceEEEEEecCCCCCCCCCEEEee----cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCC
Confidence            99999  99999999999999875    7999999999876  999996   35555 6788889999999998889999


Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCc--ccHHHHHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQ--LEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~--~~~~~i~~~~~~~g~~D~  264 (288)
                      +|++|||+|++|++|++++|+++..|++|+++.    .++++.+.++ ++|+++++|+.+  ...+.+.+.++ . ++|+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~----~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~-~~d~  228 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA----GSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFP-N-GIDI  228 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCT-T-CEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhC-C-CCcE
Confidence            999999999999999999999999999999988    5788999988 799999998765  33456666664 3 4999


Q ss_pred             EEECCCcccHHHHHhhccCCCeeC
Q 023007          265 GFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       265 v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +|||+|++.++.++++++++|+++
T Consensus       229 vi~~~g~~~~~~~~~~l~~~G~~v  252 (345)
T 2j3h_A          229 YFENVGGKMLDAVLVNMNMHGRIA  252 (345)
T ss_dssp             EEESSCHHHHHHHHTTEEEEEEEE
T ss_pred             EEECCCHHHHHHHHHHHhcCCEEE
Confidence            999999977799999999999985

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=5.2e-29  Score=266.17  Aligned_cols=220  Identities=20%  Similarity=0.150  Sum_probs=189.3

Q ss_pred             EEccCCCCCcceEEEEcCCCC-CC--CCeEEEEEeEEecChHHHHHHhCCCCCC------CCCCcccccceEEEEEEecC
Q 023007           52 VYEREGPPDSVIKMIELPPVE-VK--ENDVCVKMLAAPINPSDINRIEGVYPVR------PKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        52 ~~~~~g~~~~~~~~~~~~~p~-~~--~~evlI~v~~~~i~~~D~~~~~g~~~~~------~~~p~~~G~e~~G~V~~~G~  122 (288)
                      ....+|.. +.+.|.+.+... +.  ++||+|+|.++++|+.|+.+..|..+..      ...|..+|+|++|+|     
T Consensus      1534 ~~~~~g~l-~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----- 1607 (2512)
T 2vz8_A         1534 NVLSRGDL-SSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----- 1607 (2512)
T ss_dssp             EESSTTCT-TSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE-----
T ss_pred             EccCCCCc-CceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE-----
Confidence            33444443 347888776533 33  7899999999999999999998865421      123568999999987     


Q ss_pred             CCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHH
Q 023007          123 AVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVG  202 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG  202 (288)
                           .+||+|+++.. .|+|++|+++|++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|++|++|
T Consensus      1608 -----~vGdrV~g~~~-~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG 1681 (2512)
T 2vz8_A         1608 -----ASGRRVMGMVP-AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVG 1681 (2512)
T ss_dssp             -----TTSCCEEEECS-SCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHH
T ss_pred             -----ccCCEEEEeec-CCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHH
Confidence                 37999999864 589999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCCCEEEeCCcc-cHHHHHHHhcCCCCccEEEECCCcccHHHH
Q 023007          203 QCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQL-EVKNVKGLLANLPEPALGFNCVGGNSASKV  277 (288)
Q Consensus       203 ~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a  277 (288)
                      ++++|+|+.+|++|++++    .++++++++++    +|+++++++++. +.+.+++.+++.| +|+||||++++.++.+
T Consensus      1682 ~aAiqlAk~~Ga~Viat~----~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~G-vDvVld~~g~~~l~~~ 1756 (2512)
T 2vz8_A         1682 QAAIAIALSRGCRVFTTV----GSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKG-VDLVLNSLAEEKLQAS 1756 (2512)
T ss_dssp             HHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCC-EEEEEECCCHHHHHHH
T ss_pred             HHHHHHHHHcCCEEEEEe----CChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCC-ceEEEECCCchHHHHH
Confidence            999999999999999998    57888888875    789999998765 4577888888876 9999999998778999


Q ss_pred             HhhccCCCeeC
Q 023007          278 LKFLRFREEQW  288 (288)
Q Consensus       278 ~~~l~~~G~~v  288 (288)
                      +++|+++|+||
T Consensus      1757 l~~L~~~Gr~V 1767 (2512)
T 2vz8_A         1757 VRCLAQHGRFL 1767 (2512)
T ss_dssp             HTTEEEEEEEE
T ss_pred             HHhcCCCcEEE
Confidence            99999999985

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.83  E-value=2.2e-20  Score=153.40  Aligned_cols=132  Identities=22%  Similarity=0.244  Sum_probs=106.2

Q ss_pred             CcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007          152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE  231 (288)
Q Consensus       152 ~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  231 (288)
                      +.++++|+++++++|++++.++.|||+++.+.+++++|++|+|+|++|++|++++++++..|++|+++.    .++++.+
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~----~~~~~~~   77 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTA----GSDAKRE   77 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEE----SSHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEe----CCHHHHH
Confidence            468899999999999999999999999998888999999999999999999999999999999999988    5788888


Q ss_pred             HHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          232 KLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       232 ~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      .++++|.+.+++..+.. .+.+.+.+.+.+ +|++|||+|....+.++++|+++|++|
T Consensus        78 ~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~-~D~vi~~~g~~~~~~~~~~l~~~G~~v  134 (198)
T 1pqw_A           78 MLSRLGVEYVGDSRSVDFADEILELTDGYG-VDVVLNSLAGEAIQRGVQILAPGGRFI  134 (198)
T ss_dssp             HHHTTCCSEEEETTCSTHHHHHHHHTTTCC-EEEEEECCCTHHHHHHHHTEEEEEEEE
T ss_pred             HHHHcCCCEEeeCCcHHHHHHHHHHhCCCC-CeEEEECCchHHHHHHHHHhccCCEEE
Confidence            88999999888876543 466777666544 999999999877799999999999985

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.74  E-value=5.1e-11  Score=107.99  Aligned_cols=159  Identities=15%  Similarity=0.114  Sum_probs=115.3

Q ss_pred             cccccceEEEEEEecCCCCCCCCCCEEEe--------cCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHH
Q 023007          107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIP--------SPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALR  178 (288)
Q Consensus       107 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~--------~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~  178 (288)
                      ...|++.++.|.++|++++++.+|+.++.        .....|++++|+..+...++++|++++...++. ..+..++|.
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~  153 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSA  153 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHH
Confidence            56799999999999999999999998621        111146788888888788888888887776554 345667887


Q ss_pred             HHHhhc---CCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHH-HHHHhCCCCEEEeCCcccHHHHH
Q 023007          179 MLEDFT---TLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVK  253 (288)
Q Consensus       179 ~l~~~~---~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~i~  253 (288)
                      ++....   .-.+|++|+|+|+ |.+|.++++.++..|+ +|+++.    .+.++. +.++++|++ +++..  .   +.
T Consensus       154 av~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~----r~~~ra~~la~~~g~~-~~~~~--~---l~  222 (404)
T 1gpj_A          154 AVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVAN----RTYERAVELARDLGGE-AVRFD--E---LV  222 (404)
T ss_dssp             HHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEEC----SSHHHHHHHHHHHTCE-ECCGG--G---HH
T ss_pred             HHHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHcCCc-eecHH--h---HH
Confidence            764322   1257899999999 9999999999999999 777776    467775 567788875 33322  1   22


Q ss_pred             HHhcCCCCccEEEECCCcccH---HHHHhh
Q 023007          254 GLLANLPEPALGFNCVGGNSA---SKVLKF  280 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~~~~---~~a~~~  280 (288)
                      +...   ++|+||+|++....   ...++.
T Consensus       223 ~~l~---~aDvVi~at~~~~~~~~~~~l~~  249 (404)
T 1gpj_A          223 DHLA---RSDVVVSATAAPHPVIHVDDVRE  249 (404)
T ss_dssp             HHHH---TCSEEEECCSSSSCCBCHHHHHH
T ss_pred             HHhc---CCCEEEEccCCCCceecHHHHHH
Confidence            2233   39999999986542   345555

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.51  E-value=3.1e-07  Score=81.83  Aligned_cols=89  Identities=16%  Similarity=0.090  Sum_probs=67.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE--EEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE--VFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +++|+|+|+ |++|+++++.++.+|++|+++.    .++++.+.+++++.+.  +++....   .+.+...   ++|+||
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~d----r~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~DvVI  235 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFD----INVERLSYLETLFGSRVELLYSNSA---EIETAVA---EADLLI  235 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHGGGSEEEECCHH---HHHHHHH---TCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEe----CCHHHHHHHHHhhCceeEeeeCCHH---HHHHHHc---CCCEEE
Confidence            489999999 9999999999999999888887    5788888887766443  3443332   2222222   399999


Q ss_pred             ECCCccc-------HHHHHhhccCCCeeC
Q 023007          267 NCVGGNS-------ASKVLKFLRFREEQW  288 (288)
Q Consensus       267 d~~g~~~-------~~~a~~~l~~~G~~v  288 (288)
                      ||++.+.       ....++.++++|+++
T Consensus       236 ~~~~~~~~~~~~li~~~~~~~~~~g~~iv  264 (361)
T 1pjc_A          236 GAVLVPGRRAPILVPASLVEQMRTGSVIV  264 (361)
T ss_dssp             ECCCCTTSSCCCCBCHHHHTTSCTTCEEE
T ss_pred             ECCCcCCCCCCeecCHHHHhhCCCCCEEE
Confidence            9998644       477889999999874

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.37  E-value=1.2e-06  Score=78.73  Aligned_cols=93  Identities=13%  Similarity=0.175  Sum_probs=67.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc----------------c---
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ----------------L---  247 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~----------------~---  247 (288)
                      ++++|+|+|+ |.+|+++++.++.+|++|+++.    .++++.+.++++|++.+ ++..+                .   
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d----~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~  245 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATD----VRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRK  245 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCSTTHHHHHHTTCEECCC-----------------------C
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHh
Confidence            6899999998 9999999999999999977765    46667777788998654 22211                0   


Q ss_pred             -cHHHHHHHhcCCCCccEEEECC---Cccc---H-HHHHhhccCCCeeC
Q 023007          248 -EVKNVKGLLANLPEPALGFNCV---GGNS---A-SKVLKFLRFREEQW  288 (288)
Q Consensus       248 -~~~~i~~~~~~~g~~D~v~d~~---g~~~---~-~~a~~~l~~~G~~v  288 (288)
                       ..+.+.+...+   .|+||+|+   |.+.   . ...++.|++++.+|
T Consensus       246 ~~~~~l~~~~~~---aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~viv  291 (384)
T 1l7d_A          246 KQAEAVLKELVK---TDIAITTALIPGKPAPVLITEEMVTKMKPGSVII  291 (384)
T ss_dssp             CHHHHHHHHHTT---CSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEE
T ss_pred             hhHHHHHHHhCC---CCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEE
Confidence             11224444443   99999999   5322   3 78899999999875

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.37  E-value=1.5e-06  Score=77.76  Aligned_cols=90  Identities=13%  Similarity=0.077  Sum_probs=68.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCE-EEeCCcccHHHHHHHhcCCCCccEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADE-VFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      +|++|+|+|+ |.+|+.+++.++.+|++|+++.    .++++.+.+++ +|.+. +......   .+.+...   ++|+|
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d----~~~~~l~~~~~~~g~~~~~~~~~~~---~l~~~l~---~aDvV  235 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLD----INIDKLRQLDAEFCGRIHTRYSSAY---ELEGAVK---RADLV  235 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHTTTSSEEEECCHH---HHHHHHH---HCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEe----CCHHHHHHHHHhcCCeeEeccCCHH---HHHHHHc---CCCEE
Confidence            5799999999 9999999999999999988887    57888877765 77653 2222222   2333333   39999


Q ss_pred             EECCCccc-------HHHHHhhccCCCeeC
Q 023007          266 FNCVGGNS-------ASKVLKFLRFREEQW  288 (288)
Q Consensus       266 ~d~~g~~~-------~~~a~~~l~~~G~~v  288 (288)
                      ++|++.+.       ....++.++++|++|
T Consensus       236 i~~~~~p~~~t~~li~~~~l~~mk~g~~iV  265 (377)
T 2vhw_A          236 IGAVLVPGAKAPKLVSNSLVAHMKPGAVLV  265 (377)
T ss_dssp             EECCCCTTSCCCCCBCHHHHTTSCTTCEEE
T ss_pred             EECCCcCCCCCcceecHHHHhcCCCCcEEE
Confidence            99997654       478899999999875

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.37  E-value=2e-06  Score=76.85  Aligned_cols=91  Identities=16%  Similarity=0.130  Sum_probs=66.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++++|+|+|+ |.+|+.+++.++.+|++|+++.    .++++.+.+++ +|.+...+..+  .+.+.+...   ++|++|
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d----~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~~~---~~DvVi  234 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILD----VNHKRLQYLDDVFGGRVITLTAT--EANIKKSVQ---HADLLI  234 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHTTTSEEEEECC--HHHHHHHHH---HCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEE----CCHHHHHHHHHhcCceEEEecCC--HHHHHHHHh---CCCEEE
Confidence            4589999999 9999999999999999998887    57788777765 77763332222  123333333   399999


Q ss_pred             ECCCccc-------HHHHHhhccCCCeeC
Q 023007          267 NCVGGNS-------ASKVLKFLRFREEQW  288 (288)
Q Consensus       267 d~~g~~~-------~~~a~~~l~~~G~~v  288 (288)
                      +|++...       .+.+++.++++|++|
T Consensus       235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV  263 (369)
T 2eez_A          235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIV  263 (369)
T ss_dssp             ECCC-------CCSCHHHHTTSCTTCEEE
T ss_pred             ECCCCCccccchhHHHHHHHhhcCCCEEE
Confidence            9998653       478899999999875

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.34  E-value=2e-06  Score=79.26  Aligned_cols=151  Identities=13%  Similarity=0.078  Sum_probs=97.3

Q ss_pred             CcccccceEEEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhc-
Q 023007          106 PAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFT-  184 (288)
Q Consensus       106 p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~-  184 (288)
                      |..+ +++.|+|+++|.+++++.      ... ..|.+......-.+.+.+   . .+.   .+.....++|+++.+.. 
T Consensus       205 p~~~-~~i~GvveetgtGVd~l~------a~~-~~Gilv~~~~~vn~sVae---~-~~r---~l~~~~~s~~~g~~r~~~  269 (494)
T 3ce6_A          205 TKIA-ESVKGVTEETTTGVLRLY------QFA-AAGDLAFPAINVNDSVTK---S-KFD---NKYGTRHSLIDGINRGTD  269 (494)
T ss_dssp             HHHH-HHCCCEEECSHHHHHHHH------HHH-HTTCCCSCEEECTTSHHH---H-TTH---HHHHHHHHHHHHHHHHHC
T ss_pred             hhhh-cCeEEEEEEeCCChhHHH------HHH-HcCCEEEecCCccHHHHH---H-HHh---hhhhhhhhhhHHHHhccC
Confidence            3344 789999999988877651      000 012222221111111111   0 000   11112345666664432 


Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccE
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      ...+|++|+|+|. |.+|..+++.++.+|++|+++.    .++++.+.++++|++ +.+     .+.   ...   +.|+
T Consensus       270 ~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d----~~~~~~~~A~~~Ga~-~~~-----l~e---~l~---~aDv  332 (494)
T 3ce6_A          270 ALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTE----IDPINALQAMMEGFD-VVT-----VEE---AIG---DADI  332 (494)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCE-ECC-----HHH---HGG---GCSE
T ss_pred             CCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCE-Eec-----HHH---HHh---CCCE
Confidence            2789999999998 9999999999999999988887    578888888889985 322     122   222   3999


Q ss_pred             EEECCCcccH--HHHHhhccCCCeeC
Q 023007          265 GFNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       265 v~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                      |++|+|....  ...++.++++|+++
T Consensus       333 Vi~atgt~~~i~~~~l~~mk~ggilv  358 (494)
T 3ce6_A          333 VVTATGNKDIIMLEHIKAMKDHAILG  358 (494)
T ss_dssp             EEECSSSSCSBCHHHHHHSCTTCEEE
T ss_pred             EEECCCCHHHHHHHHHHhcCCCcEEE
Confidence            9999998764  48899999999874

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.22  E-value=1.8e-06  Score=72.24  Aligned_cols=97  Identities=13%  Similarity=-0.025  Sum_probs=66.0

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCC-CEEEeCCcccHHHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGA-DEVFTESQLEVKNVKG  254 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~i~~  254 (288)
                      +.....+.++++||..|+ | .|..+..+++. +.+++++.    .+++..+.+++    .+. +.+-....+    +.+
T Consensus        83 ~~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~~~~~~~d----~~~  151 (248)
T 2yvl_A           83 IALKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFE----AVEEFYKTAQKNLKKFNLGKNVKFFNVD----FKD  151 (248)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEC----SCHHHHHHHHHHHHHTTCCTTEEEECSC----TTT
T ss_pred             HHHhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEe----cCHHHHHHHHHHHHHcCCCCcEEEEEcC----hhh
Confidence            334477889999999999 6 69999999998 88888886    57877776653    343 111111111    111


Q ss_pred             Hh-cCCCCccEEEECCCcc-c-HHHHHhhccCCCeeC
Q 023007          255 LL-ANLPEPALGFNCVGGN-S-ASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~-~~~g~~D~v~d~~g~~-~-~~~a~~~l~~~G~~v  288 (288)
                      .. .+. ++|+|+.+.+.. . ++.+.+.|+++|+++
T Consensus       152 ~~~~~~-~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~  187 (248)
T 2yvl_A          152 AEVPEG-IFHAAFVDVREPWHYLEKVHKSLMEGAPVG  187 (248)
T ss_dssp             SCCCTT-CBSEEEECSSCGGGGHHHHHHHBCTTCEEE
T ss_pred             cccCCC-cccEEEECCcCHHHHHHHHHHHcCCCCEEE
Confidence            11 222 499999988765 3 488999999999974

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.18  E-value=3.3e-06  Score=76.14  Aligned_cols=93  Identities=12%  Similarity=0.043  Sum_probs=67.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE-eCC--------------ccc----
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TES--------------QLE----  248 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~-~~~--------------~~~----  248 (288)
                      ++++|+|+|+ |.+|+.+++.++.+|++|+++.    .++++.+.++++|++.+. +..              ...    
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D----~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  245 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFD----TRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAE  245 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHH
Confidence            5789999998 9999999999999999887776    577788888889876542 211              000    


Q ss_pred             HHHHHHHhcCCCCccEEEECCCc------ccH-HHHHhhccCCCeeC
Q 023007          249 VKNVKGLLANLPEPALGFNCVGG------NSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       249 ~~~i~~~~~~~g~~D~v~d~~g~------~~~-~~a~~~l~~~G~~v  288 (288)
                      .+.+.+...+   .|+||+|++.      ... ...++.|+++|.+|
T Consensus       246 ~~~l~e~~~~---aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIV  289 (401)
T 1x13_A          246 MELFAAQAKE---VDIIVTTALIPGKPAPKLITREMVDSMKAGSVIV  289 (401)
T ss_dssp             HHHHHHHHHH---CSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEE
T ss_pred             HHHHHHHhCC---CCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEE
Confidence            0124444443   9999999532      223 78899999999875

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.06  E-value=5.6e-05  Score=55.22  Aligned_cols=88  Identities=11%  Similarity=-0.063  Sum_probs=61.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .+.+|+|+|+ |.+|...++.+...| .+++++.    .++++.+.+...+...+. .+-...+.+.+...   ++|+||
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~----r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~---~~d~vi   74 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVAD----HDLAALAVLNRMGVATKQ-VDAKDEAGLAKALG---GFDAVI   74 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEE----SCHHHHHHHHTTTCEEEE-CCTTCHHHHHHHTT---TCSEEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEe----CCHHHHHHHHhCCCcEEE-ecCCCHHHHHHHHc---CCCEEE
Confidence            3568999999 999999999999999 7888887    578888777766654432 22222345555544   399999


Q ss_pred             ECCCcccHH-HHHhhccCC
Q 023007          267 NCVGGNSAS-KVLKFLRFR  284 (288)
Q Consensus       267 d~~g~~~~~-~a~~~l~~~  284 (288)
                      +|++..... .+..+.+.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~g   93 (118)
T 3ic5_A           75 SAAPFFLTPIIAKAAKAAG   93 (118)
T ss_dssp             ECSCGGGHHHHHHHHHHTT
T ss_pred             ECCCchhhHHHHHHHHHhC
Confidence            999876653 333344443

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.97  E-value=2.8e-05  Score=69.14  Aligned_cols=93  Identities=10%  Similarity=0.039  Sum_probs=67.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe---------CCc--------ccHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT---------ESQ--------LEVK  250 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~---------~~~--------~~~~  250 (288)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++..    .++++++.++++|++.+..         +..        ...+
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D----~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~  257 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYD----VRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQ  257 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEEC----SSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHH
Confidence            5789999999 9999999999999999988876    5788888888898764321         000        0112


Q ss_pred             HHHHHhcCCCCccEEEECCCc-----c-cH-HHHHhhccCCCeeC
Q 023007          251 NVKGLLANLPEPALGFNCVGG-----N-SA-SKVLKFLRFREEQW  288 (288)
Q Consensus       251 ~i~~~~~~~g~~D~v~d~~g~-----~-~~-~~a~~~l~~~G~~v  288 (288)
                      .+.+...+   .|+||.|+..     + .+ ...++.+++++.+|
T Consensus       258 ~l~e~l~~---aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIV  299 (381)
T 3p2y_A          258 ALEDAITK---FDIVITTALVPGRPAPRLVTAAAATGMQPGSVVV  299 (381)
T ss_dssp             HHHHHHTT---CSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEE
T ss_pred             HHHHHHhc---CCEEEECCCCCCcccceeecHHHHhcCCCCcEEE
Confidence            34444443   9999999632     1 23 88899999988764

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.91  E-value=4.2e-05  Score=68.54  Aligned_cols=93  Identities=19%  Similarity=0.134  Sum_probs=67.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeC-------------Cc----c---
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE-------------SQ----L---  247 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~-------------~~----~---  247 (288)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++..    .++++++.++++|.+.+...             ..    .   
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D----~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~  263 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATD----VRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQV  263 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SSTTHHHHHHHTTCEECCCCC-----------------CHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhh
Confidence            5689999999 9999999999999999988776    57778888888887533210             00    0   


Q ss_pred             -cHHHHHHHhcCCCCccEEEECCCcc-----c-H-HHHHhhccCCCeeC
Q 023007          248 -EVKNVKGLLANLPEPALGFNCVGGN-----S-A-SKVLKFLRFREEQW  288 (288)
Q Consensus       248 -~~~~i~~~~~~~g~~D~v~d~~g~~-----~-~-~~a~~~l~~~G~~v  288 (288)
                       ..+.+.+...+   .|+||.|+..+     . + ...++.++++..+|
T Consensus       264 ~~~~~l~e~l~~---aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIV  309 (405)
T 4dio_A          264 KQAALVAEHIAK---QDIVITTALIPGRPAPRLVTREMLDSMKPGSVVV  309 (405)
T ss_dssp             HHHHHHHHHHHT---CSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEE
T ss_pred             hhHhHHHHHhcC---CCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEE
Confidence             01234444443   99999996422     2 3 88899999998764

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.87  E-value=8.5e-05  Score=64.01  Aligned_cols=89  Identities=12%  Similarity=0.094  Sum_probs=67.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      --+|++|+|+|. |.+|..+++.++..|++|++..    .+.++.+.++++|... ++.     +.+.++..   +.|+|
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d----r~~~~~~~~~~~g~~~-~~~-----~~l~~~l~---~aDvV  217 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGA----RESDLLARIAEMGMEP-FHI-----SKAAQELR---DVDVC  217 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTSEE-EEG-----GGHHHHTT---TCSEE
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEE----CCHHHHHHHHHCCCee-cCh-----hhHHHHhc---CCCEE
Confidence            346899999998 9999999999999999998887    4666666667788653 221     12233333   39999


Q ss_pred             EECCCcccH-HHHHhhccCCCeeC
Q 023007          266 FNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       266 ~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +.|+..... ...++.+++++.++
T Consensus       218 i~~~p~~~i~~~~l~~mk~~~~li  241 (293)
T 3d4o_A          218 INTIPALVVTANVLAEMPSHTFVI  241 (293)
T ss_dssp             EECCSSCCBCHHHHHHSCTTCEEE
T ss_pred             EECCChHHhCHHHHHhcCCCCEEE
Confidence            999987665 67788899988764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.86  E-value=0.00015  Score=60.26  Aligned_cols=80  Identities=14%  Similarity=0.141  Sum_probs=56.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++++++|+|++|++|...++.+...|++|+++.    .++++.+.+ +++....++..+-.+.+.+.++....+++|++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVS----RTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEE
Confidence            578999999999999999999999999999988    456555443 344322333322233345555554444699999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      ++.|.
T Consensus        82 ~~Ag~   86 (244)
T 3d3w_A           82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.84  E-value=4e-05  Score=59.44  Aligned_cols=91  Identities=15%  Similarity=0.142  Sum_probs=60.6

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHHHHHHhcCCCCc
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      ....++++|+|+|+ |.+|...++.++..|.+|+++.    .++++.+.++ ..|... +.......+.+.+. +-. ++
T Consensus        14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid----~~~~~~~~~~~~~g~~~-~~~d~~~~~~l~~~-~~~-~a   85 (155)
T 2g1u_A           14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVD----KNEYAFHRLNSEFSGFT-VVGDAAEFETLKEC-GME-KA   85 (155)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCGGGGGGSCTTCCSEE-EESCTTSHHHHHTT-TGG-GC
T ss_pred             hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEE----CCHHHHHHHHhcCCCcE-EEecCCCHHHHHHc-Ccc-cC
Confidence            44567889999998 9999999999999999999887    4677766665 566543 33322222333332 111 39


Q ss_pred             cEEEECCCcccH-HHHHhhcc
Q 023007          263 ALGFNCVGGNSA-SKVLKFLR  282 (288)
Q Consensus       263 D~v~d~~g~~~~-~~a~~~l~  282 (288)
                      |+||.|++.... ..+...++
T Consensus        86 d~Vi~~~~~~~~~~~~~~~~~  106 (155)
T 2g1u_A           86 DMVFAFTNDDSTNFFISMNAR  106 (155)
T ss_dssp             SEEEECSSCHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHH
Confidence            999999998665 44444443

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.82  E-value=7.2e-05  Score=64.28  Aligned_cols=94  Identities=13%  Similarity=0.089  Sum_probs=67.3

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCCCEE--EeCCcccHHHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGADEV--FTESQLEVKNVKGL  255 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~~~v--~~~~~~~~~~i~~~  255 (288)
                      ..+++++|++||.+|+ |..+..++.+++..|++|+++.    .+++..+.+++    .|.+.+  +..+...      +
T Consensus       116 ~la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gID----is~~~l~~Ar~~~~~~gl~~v~~v~gDa~~------l  184 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVE----IEPDIAELSRKVIEGLGVDGVNVITGDETV------I  184 (298)
T ss_dssp             HHTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEE----SSHHHHHHHHHHHHHHTCCSEEEEESCGGG------G
T ss_pred             HHcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEE----CCHHHHHHHHHHHHhcCCCCeEEEECchhh------C
Confidence            3578999999999999 7777777888888899999998    57888877653    354322  2222211      2


Q ss_pred             hcCCCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      ..+  .||+|+.....+    .++...+.|+|||+++
T Consensus       185 ~d~--~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lv  219 (298)
T 3fpf_A          185 DGL--EFDVLMVAALAEPKRRVFRNIHRYVDTETRII  219 (298)
T ss_dssp             GGC--CCSEEEECTTCSCHHHHHHHHHHHCCTTCEEE
T ss_pred             CCC--CcCEEEECCCccCHHHHHHHHHHHcCCCcEEE
Confidence            222  499999765543    3488889999999985

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.79  E-value=1.3e-05  Score=61.49  Aligned_cols=100  Identities=7%  Similarity=-0.046  Sum_probs=65.3

Q ss_pred             hHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHH
Q 023007          173 PLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKN  251 (288)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~  251 (288)
                      .+.++.++.. .....+++|+|+|+ |.+|...++.++..|++++++.    .++++.+ +.++++.+. ....+  .+.
T Consensus         6 ~sv~~~a~~~-~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~----r~~~~~~~~a~~~~~~~-~~~~~--~~~   76 (144)
T 3oj0_A            6 VSIPSIVYDI-VRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAG----RNIDHVRAFAEKYEYEY-VLIND--IDS   76 (144)
T ss_dssp             CSHHHHHHHH-HHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEE----SCHHHHHHHHHHHTCEE-EECSC--HHH
T ss_pred             ccHHHHHHHH-HHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc----CCHHHHHHHHHHhCCce-EeecC--HHH
Confidence            4566666654 33334899999998 9999999999988999966665    4666665 456677432 22221  112


Q ss_pred             HHHHhcCCCCccEEEECCCcccHHHHHhhccCCCee
Q 023007          252 VKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQ  287 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~  287 (288)
                         ...   +.|+||+|++..........+++++.+
T Consensus        77 ---~~~---~~Divi~at~~~~~~~~~~~l~~g~~v  106 (144)
T 3oj0_A           77 ---LIK---NNDVIITATSSKTPIVEERSLMPGKLF  106 (144)
T ss_dssp             ---HHH---TCSEEEECSCCSSCSBCGGGCCTTCEE
T ss_pred             ---Hhc---CCCEEEEeCCCCCcEeeHHHcCCCCEE
Confidence               222   399999999976432223667776655

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.76  E-value=0.00015  Score=61.72  Aligned_cols=98  Identities=14%  Similarity=0.070  Sum_probs=63.9

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHH----hCCC-CEEEeCCcccHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGA-DEVFTESQLEVKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~g~-~~v~~~~~~~~~~i  252 (288)
                      +.....+.++++||-.|+ |. |..++.+++..  +.+++++.    .+++..+.++    ..+. +.+-....+. ...
T Consensus       104 i~~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~  176 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYE----KREEFAKLAESNLTKWGLIERVTIKVRDI-SEG  176 (277)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEEC----CCHHHHHHHHHHHHHTTCGGGEEEECCCG-GGC
T ss_pred             HHHHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEE----CCHHHHHHHHHHHHHcCCCCCEEEEECCH-HHc
Confidence            344567899999999998 55 88888999885  46777776    5777776664    3454 2121111111 111


Q ss_pred             HHHhcCCCCccEEEECCCcc--cHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVGGN--SASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~~--~~~~a~~~l~~~G~~v  288 (288)
                        +..+  .+|+|+......  .+..+.++|+++|+++
T Consensus       177 --~~~~--~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~  210 (277)
T 1o54_A          177 --FDEK--DVDALFLDVPDPWNYIDKCWEALKGGGRFA  210 (277)
T ss_dssp             --CSCC--SEEEEEECCSCGGGTHHHHHHHEEEEEEEE
T ss_pred             --ccCC--ccCEEEECCcCHHHHHHHHHHHcCCCCEEE
Confidence              1122  499999876654  3488899999999874

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.76  E-value=0.00034  Score=58.03  Aligned_cols=79  Identities=15%  Similarity=0.112  Sum_probs=54.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++++++|+|++|++|...++.+...|++|+++.    .++++.+.+ +++....++..+-.+.+.+.++....+++|++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVT----RTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEE
Confidence            468999999999999999999999999999988    455555433 333222333222223345555554444699999


Q ss_pred             ECCC
Q 023007          267 NCVG  270 (288)
Q Consensus       267 d~~g  270 (288)
                      ++.|
T Consensus        82 ~~Ag   85 (244)
T 1cyd_A           82 NNAA   85 (244)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9998

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.75  E-value=0.00019  Score=64.52  Aligned_cols=96  Identities=14%  Similarity=0.073  Sum_probs=70.2

Q ss_pred             HHHHHHhhc-CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007          176 ALRMLEDFT-TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       176 a~~~l~~~~-~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~  254 (288)
                      .+.++.+.. ..-.|++|+|.|. |.+|..+++.++.+|++|+++.    .++.+...+...|+.. .        .+.+
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D----~dp~ra~~A~~~G~~v-~--------~Lee  271 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTE----IDPICALQACMDGFRL-V--------KLNE  271 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCEE-C--------CHHH
T ss_pred             HHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEe----CChhhhHHHHHcCCEe-c--------cHHH
Confidence            445554433 3568999999999 9999999999999999988876    4666665566667531 1        1222


Q ss_pred             HhcCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                      ...   ..|+++.|.|....  ...++.|++++.++
T Consensus       272 al~---~ADIVi~atgt~~lI~~e~l~~MK~gailI  304 (435)
T 3gvp_A          272 VIR---QVDIVITCTGNKNVVTREHLDRMKNSCIVC  304 (435)
T ss_dssp             HTT---TCSEEEECSSCSCSBCHHHHHHSCTTEEEE
T ss_pred             HHh---cCCEEEECCCCcccCCHHHHHhcCCCcEEE
Confidence            333   38999999887664  68899999998764

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.74  E-value=0.00017  Score=62.31  Aligned_cols=89  Identities=13%  Similarity=0.100  Sum_probs=67.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      --+|++|+|+|. |.+|..+++.++..|++|++..    .+.++.+.+.++|.. +++.     ..+.++..   +.|+|
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d----~~~~~~~~~~~~g~~-~~~~-----~~l~~~l~---~aDvV  219 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGA----RSSAHLARITEMGLV-PFHT-----DELKEHVK---DIDIC  219 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCE-EEEG-----GGHHHHST---TCSEE
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHCCCe-EEch-----hhHHHHhh---CCCEE
Confidence            346899999999 9999999999999999998887    466666666677764 2222     12333333   39999


Q ss_pred             EECCCcccH-HHHHhhccCCCeeC
Q 023007          266 FNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       266 ~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +.+++.... ...++.+++++.++
T Consensus       220 i~~~p~~~i~~~~~~~mk~g~~li  243 (300)
T 2rir_A          220 INTIPSMILNQTVLSSMTPKTLIL  243 (300)
T ss_dssp             EECCSSCCBCHHHHTTSCTTCEEE
T ss_pred             EECCChhhhCHHHHHhCCCCCEEE
Confidence            999998666 66788899988764

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.73  E-value=8.6e-05  Score=62.63  Aligned_cols=80  Identities=16%  Similarity=0.049  Sum_probs=55.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEEEeCC----cccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVFTES----QLEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v~~~~----~~~~~~-i~~~~~~  258 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+    .+++.|.+.....-    ...++. +.+....
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~----~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILND----IRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECC----SCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999887    3555443    34556655443221    122322 3333344


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|+++|+.|.
T Consensus        84 ~G~iDiLVNNAG~   96 (255)
T 4g81_D           84 GIHVDILINNAGI   96 (255)
T ss_dssp             TCCCCEEEECCCC
T ss_pred             CCCCcEEEECCCC
Confidence            5579999999984

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.72  E-value=0.00013  Score=60.87  Aligned_cols=80  Identities=15%  Similarity=0.135  Sum_probs=52.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+.++.--..+.-+-.+.+.+.+.....+++|++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~   80 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATD----INESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFN   80 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEE
Confidence            468999999999999999999989999999998    4566554433332112222221222333333322335999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      +.|.
T Consensus        81 ~Ag~   84 (246)
T 2ag5_A           81 VAGF   84 (246)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9984

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.70  E-value=0.00026  Score=59.06  Aligned_cols=82  Identities=16%  Similarity=0.163  Sum_probs=56.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEe-CCcccHHHHHHHhcCCCCcc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFT-ESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~-~~~~~~~~i~~~~~~~g~~D  263 (288)
                      ..++++|+|+|++|++|...++.+...|++|+++.    .++++.+.+ +++.....+. .+-.+.+.+.++....+++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISG----SNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence            45789999999999999999998889999999998    466665544 3444332222 22223344444444434599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|++.|.
T Consensus        87 ~li~~Ag~   94 (249)
T 3f9i_A           87 ILVCNAGI   94 (249)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCCC
Confidence            99999984

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.68  E-value=0.00024  Score=60.51  Aligned_cols=84  Identities=11%  Similarity=0.068  Sum_probs=54.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE---eCCc-ccHHHHHHHhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQ-LEVKNVKGLLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~---~~~~-~~~~~i~~~~~~~g~~D  263 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.....++..+.+++.+.....   |-.+ ..++.+.+.....+++|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999899999999987654444444555555644322   2111 12222221111113599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|++.|.
T Consensus       112 ~lvnnAg~  119 (275)
T 4imr_A          112 ILVINASA  119 (275)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.65  E-value=0.00017  Score=60.74  Aligned_cols=79  Identities=15%  Similarity=0.230  Sum_probs=53.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEEEeC---Cc-ccHHHH-HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVFTE---SQ-LEVKNV-KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v~~~---~~-~~~~~i-~~~~~~  258 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+    .+++.|.+.....   .+ ..++.+ .+....
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~----~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVE----LLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE----CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            579999999999999999998889999999987    4555543    3456676543221   11 222222 222222


Q ss_pred             CCCccEEEECCC
Q 023007          259 LPEPALGFNCVG  270 (288)
Q Consensus       259 ~g~~D~v~d~~g  270 (288)
                      .|++|+++|+.|
T Consensus        82 ~G~iDiLVNNAG   93 (254)
T 4fn4_A           82 YSRIDVLCNNAG   93 (254)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence            346999999998

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.63  E-value=0.00018  Score=60.29  Aligned_cols=81  Identities=17%  Similarity=0.125  Sum_probs=56.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc-ccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ-LEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.+.  ..++..+.+++.|.+.....-+ .+.+.+++... .|++|+++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~--~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-~g~iDiLV   84 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARR--APDETLDIIAKDGGNASALLIDFADPLAAKDSFT-DAGFDILV   84 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS--CCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-TTCCCEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCC--cHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-hCCCCEEE
Confidence            58999999999999999999999999999998764  2356677778888664432111 11112222211 23699999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      |+.|.
T Consensus        85 NNAGi   89 (247)
T 4hp8_A           85 NNAGI   89 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99984

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.63  E-value=0.00016  Score=59.80  Aligned_cols=76  Identities=14%  Similarity=0.282  Sum_probs=53.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|.+|+|+|++|.+|...++.+...|++|+++.    .++++.+.+...+...++..+-.  +.+.+..+   ++|+||+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~----R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~---~~D~vi~   90 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMV----RNEEQGPELRERGASDIVVANLE--EDFSHAFA---SIDAVVF   90 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SSGGGHHHHHHTTCSEEEECCTT--SCCGGGGT---TCSEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEE----CChHHHHHHHhCCCceEEEcccH--HHHHHHHc---CCCEEEE
Confidence            468999999999999999999999999999999    46666666666666222222111  22333333   3999999


Q ss_pred             CCCcc
Q 023007          268 CVGGN  272 (288)
Q Consensus       268 ~~g~~  272 (288)
                      |.|..
T Consensus        91 ~ag~~   95 (236)
T 3e8x_A           91 AAGSG   95 (236)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99853

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.62  E-value=0.00035  Score=57.06  Aligned_cols=86  Identities=13%  Similarity=-0.006  Sum_probs=56.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHH-HcCCeEEEEEcCCCCCHH-HHHHHHhCCCC-EEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIAR-HRGIHSINIIRDRAGSDE-AKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~-~~g~~vi~~~~~~~~~~~-~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++|+|+|++|.+|...++.+. ..|++|+++.    .+++ +.+.+...+.. .++..+-.+.+.+.+...+   +|++|
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~d~vv   78 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYG----RQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTN---AEVVF   78 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEE----SSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTT---CSEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEe----cCccccchhhccCCCceEEEECCCCCHHHHHHHHcC---CCEEE
Confidence            569999999999999888887 8999999998    4566 55444322322 2232222234556555543   99999


Q ss_pred             ECCCccc--HHHHHhhcc
Q 023007          267 NCVGGNS--ASKVLKFLR  282 (288)
Q Consensus       267 d~~g~~~--~~~a~~~l~  282 (288)
                      +|.|...  ....++.++
T Consensus        79 ~~ag~~n~~~~~~~~~~~   96 (221)
T 3r6d_A           79 VGAMESGSDMASIVKALS   96 (221)
T ss_dssp             ESCCCCHHHHHHHHHHHH
T ss_pred             EcCCCCChhHHHHHHHHH
Confidence            9998633  244444443

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.61  E-value=0.00019  Score=60.22  Aligned_cols=83  Identities=16%  Similarity=0.109  Sum_probs=52.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-E--eCCc-ccHHHHH-HHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQ-LEVKNVK-GLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~--~~~~-~~~~~i~-~~~~~~g~~  262 (288)
                      .+++++|+|+++++|.+.++.+...|++|+++.+.....++..+.+++.+.... +  |-.+ ..++.+. +.... |++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCc
Confidence            578999999999999999999999999999998543222233334444554322 2  2111 1222211 11111 359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|++.|.
T Consensus        85 d~lv~nAg~   93 (252)
T 3h7a_A           85 EVTIFNVGA   93 (252)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEECCCc
Confidence            999999984

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.59  E-value=0.00046  Score=59.09  Aligned_cols=80  Identities=15%  Similarity=0.172  Sum_probs=56.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-EeCCcccHHHHHHHhcCCCCccEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      +|++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ ++++.... +.-+-.+.+.+.++....+++|++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l   90 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAV----RDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVL   90 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            578999999999999999999989999999998    466666554 34543222 222222334555554443359999


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      |++.|.
T Consensus        91 v~nAg~   96 (291)
T 3rd5_A           91 INNAGI   96 (291)
T ss_dssp             EECCCC
T ss_pred             EECCcC
Confidence            999984

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.57  E-value=0.00063  Score=57.02  Aligned_cols=78  Identities=14%  Similarity=0.092  Sum_probs=53.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCC--c-ccHHH-HHHHhcCCCCccE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTES--Q-LEVKN-VKGLLANLPEPAL  264 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~--~-~~~~~-i~~~~~~~g~~D~  264 (288)
                      ++|+|+|+++++|.+.++.+...|++|+++.    .++++.+.+.+.+.... +.-+  + ..++. +.+.....|++|+
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFID----IDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            7899999999999999999999999999987    56777766655554433 2111  1 12222 2222222346999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      ++|+.|.
T Consensus        79 LVNNAG~   85 (247)
T 3ged_A           79 LVNNACR   85 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.56  E-value=0.00049  Score=58.08  Aligned_cols=83  Identities=12%  Similarity=0.101  Sum_probs=54.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-E--eCCc-ccHHH-HHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQ-LEVKN-VKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~~g~~  262 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.+... ..+..+.+.+.+.... +  |-.+ ..++. +.+.....|++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAP-DGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-CHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcc-cHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999888889999999987543 3344444554454322 2  2222 22222 22222233469


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |+++|+.|.
T Consensus        85 DiLVNnAGi   93 (258)
T 4gkb_A           85 DGLVNNAGV   93 (258)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.55  E-value=0.00061  Score=54.08  Aligned_cols=79  Identities=15%  Similarity=0.130  Sum_probs=58.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +++|+|+|+ |.+|...++.++.. |.+|+++.    .++++.+.+++.|...+.. +..+.+.+.+.++-. ++|+||.
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid----~~~~~~~~~~~~g~~~~~g-d~~~~~~l~~~~~~~-~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIE----IREEAAQQHRSEGRNVISG-DATDPDFWERILDTG-HVKLVLL  111 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEE----SCHHHHHHHHHTTCCEEEC-CTTCHHHHHTBCSCC-CCCEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEE----CCHHHHHHHHHCCCCEEEc-CCCCHHHHHhccCCC-CCCEEEE
Confidence            678999998 99999999999998 99999988    5788888888888765432 222223344331222 3999999


Q ss_pred             CCCcccH
Q 023007          268 CVGGNSA  274 (288)
Q Consensus       268 ~~g~~~~  274 (288)
                      |+++...
T Consensus       112 ~~~~~~~  118 (183)
T 3c85_A          112 AMPHHQG  118 (183)
T ss_dssp             CCSSHHH
T ss_pred             eCCChHH
Confidence            9997654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.55  E-value=0.00045  Score=58.25  Aligned_cols=83  Identities=13%  Similarity=0.133  Sum_probs=49.5

Q ss_pred             CCCeEEEeCCCCh--HHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCC--EEE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSI--VGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGAD--EVF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~--vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~--~v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|++|.  +|.+.++.+...|++|+++.+... ..+.. +..++++..  .++  |-.+ ..++. +.+....
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER-LEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchH-HHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            5789999999955  999988888888999999875321 22222 233444431  222  2222 12222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        85 ~g~id~li~~Ag~   97 (266)
T 3oig_A           85 VGVIHGIAHCIAF   97 (266)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCeeEEEEcccc
Confidence            2359999999874

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.54  E-value=0.00047  Score=58.27  Aligned_cols=80  Identities=14%  Similarity=0.198  Sum_probs=51.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCC-CCEE--EeCCcccHHHHHHHhcCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLG-ADEV--FTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g-~~~v--~~~~~~~~~~i~~~~~~~g  260 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+    ++++.+.    +++.+ ...+  +..+-.+.+.+.+.....+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g   84 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGR----REENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP   84 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC
Confidence            5789999999999999999988889999999984    5544432    22222 1121  2112222233444333344


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        85 ~id~lv~nAg~   95 (267)
T 3t4x_A           85 KVDILINNLGI   95 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.54  E-value=8.7e-05  Score=62.03  Aligned_cols=80  Identities=15%  Similarity=0.162  Sum_probs=52.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcccHHHHHHHhcCCCCccE
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      +-.|++++|+|+++++|.+.++.+...|++|+++.++    +++.+..  .+.... +.-+-.+.+.+.++....|++|+
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~----~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   81 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLD----ADGVHAP--RHPRIRREELDITDSQRLQRLFEALPRLDV   81 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS----TTSTTSC--CCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----HHHHhhh--hcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            4479999999999999999999999999999998853    3332211  122211 11111122344444444557999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      ++|+.|.
T Consensus        82 LVNNAGi   88 (242)
T 4b79_A           82 LVNNAGI   88 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.54  E-value=0.00042  Score=58.96  Aligned_cols=81  Identities=17%  Similarity=0.166  Sum_probs=55.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEEE---eCCc-ccHHHH-HHHhcCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVF---TESQ-LEVKNV-KGLLANLP  260 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~---~~~~-~~~~~i-~~~~~~~g  260 (288)
                      -+|+.++|+|+++++|.+.++.+...|++|+++.    .++++.+ ..+++|.....   |-.+ ..++.+ .+.....|
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~----r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITG----RRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999999999998    4666665 44567754332   2111 222222 22222234


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|+++++.|.
T Consensus       103 ~iDiLVNNAG~  113 (273)
T 4fgs_A          103 RIDVLFVNAGG  113 (273)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999985

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.53  E-value=0.00038  Score=59.81  Aligned_cols=81  Identities=17%  Similarity=0.135  Sum_probs=50.2

Q ss_pred             CCCCeEEEeCCCCh--HHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCC--c-ccHHHH-HHHh
Q 023007          187 NSGDSIVQNGATSI--VGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEVFTES--Q-LEVKNV-KGLL  256 (288)
Q Consensus       187 ~~g~~vlI~g~~g~--vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~--~-~~~~~i-~~~~  256 (288)
                      -.|++++|+|++|.  +|.+.++.+...|++|+++.+    +++..+.+    ++.+...++.-+  + ..++.+ .+..
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQ----GDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEEC----SHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            46789999999865  999999988899999999874    44332222    233432222222  1 122222 2222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|++|+|.|.
T Consensus       105 ~~~g~iD~lVnnAG~  119 (293)
T 3grk_A          105 KKWGKLDFLVHAIGF  119 (293)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HhcCCCCEEEECCcc
Confidence            223359999999985

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.52  E-value=0.00098  Score=56.77  Aligned_cols=81  Identities=16%  Similarity=0.169  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEE-E--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEV-F--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|++|++|.+.++.+...|++|+++.+.   .++..    +.+++.+.+.. +  |-.+ ..++. +.+....
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN---STESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999998853   22222    23345554432 2  2111 11221 1111111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus       105 ~g~iD~lv~~Ag~  117 (283)
T 1g0o_A          105 FGKLDIVCSNSGV  117 (283)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2259999999984

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.52  E-value=0.00052  Score=62.80  Aligned_cols=95  Identities=16%  Similarity=0.080  Sum_probs=67.4

Q ss_pred             HHHHHhhcCC-CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHH
Q 023007          177 LRMLEDFTTL-NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL  255 (288)
Q Consensus       177 ~~~l~~~~~~-~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~  255 (288)
                      +.++.+.... -.|++++|+|+ |++|.+.++.++..|++|+++.    .++.+...+...|++ +.+..        +.
T Consensus       252 ~dgi~r~tg~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D----~~~~~a~~Aa~~g~d-v~~le--------e~  317 (488)
T 3ond_A          252 PDGLMRATDVMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTE----IDPICALQATMEGLQ-VLTLE--------DV  317 (488)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCE-ECCGG--------GT
T ss_pred             HHHHHHHcCCcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHhCCc-cCCHH--------HH
Confidence            3344443333 57899999999 7999999999999999998875    467776666666653 22111        11


Q ss_pred             hcCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                      ..   .+|+++++.|....  ...++.+++++.++
T Consensus       318 ~~---~aDvVi~atG~~~vl~~e~l~~mk~gaiVv  349 (488)
T 3ond_A          318 VS---EADIFVTTTGNKDIIMLDHMKKMKNNAIVC  349 (488)
T ss_dssp             TT---TCSEEEECSSCSCSBCHHHHTTSCTTEEEE
T ss_pred             HH---hcCEEEeCCCChhhhhHHHHHhcCCCeEEE
Confidence            11   38999999997554  66888999887663

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.52  E-value=0.00067  Score=58.16  Aligned_cols=81  Identities=17%  Similarity=0.206  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEEE---eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVF---TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v~---~~~~-~~~~~-i~~~~~~  258 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.+.   .++..    +.+++.+....+   |-.+ ..++. +.+....
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLD---EEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999998853   22222    233455554332   2111 11222 1222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus       123 ~g~iD~lvnnAg~  135 (291)
T 3ijr_A          123 LGSLNILVNNVAQ  135 (291)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.50  E-value=0.00038  Score=57.99  Aligned_cols=80  Identities=18%  Similarity=0.177  Sum_probs=52.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+.    +++.+.... +  |-.+ ..++. +.+....
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTAT----SQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999888889999999984    5554433    334454422 2  2111 12222 2223333


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus        80 ~~~id~li~~Ag~   92 (247)
T 3lyl_A           80 NLAIDILVNNAGI   92 (247)
T ss_dssp             TCCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            3469999999984

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.49  E-value=0.00076  Score=57.38  Aligned_cols=84  Identities=15%  Similarity=0.210  Sum_probs=52.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCC--c-ccHHH-HHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTES--Q-LEVKN-VKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~--~-~~~~~-i~~~~~~~g~~  262 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.....++..+.+++.+.. ..+.-+  + ..++. +.+.....|++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5689999999999999999988899999999986432222233344445533 222222  2 12222 11121222359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|++.|.
T Consensus       111 D~lvnnAg~  119 (276)
T 3r1i_A          111 DIAVCNAGI  119 (276)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.47  E-value=0.001  Score=58.15  Aligned_cols=81  Identities=9%  Similarity=0.067  Sum_probs=57.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC------CCCEEEeCCcccHHHHHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL------GADEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~------g~~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      .+.+|||+|++|.+|...++.+...|.+|+++.+......+..+.++..      .--.++..+-.+.+.+.++..+   
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---  100 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG---  100 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT---
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC---
Confidence            3579999999999999999999999999999997654455555555543      2222333332334556665553   


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|+||+|.+.
T Consensus       101 ~d~Vih~A~~  110 (351)
T 3ruf_A          101 VDHVLHQAAL  110 (351)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999985

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.46  E-value=0.00087  Score=55.86  Aligned_cols=80  Identities=15%  Similarity=0.199  Sum_probs=52.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-EeCCc-ccHHH-HHHHhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQ-LEVKN-VKGLLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~~~~~-~~~~~-i~~~~~~~g~~D  263 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ ++++...+ .|-.+ ..++. +.+.....|++|
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   79 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACD----IEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLD   79 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999989999999998    456665544 45563222 22222 12222 111112223599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|+|.|.
T Consensus        80 ~lvn~Ag~   87 (245)
T 1uls_A           80 GVVHYAGI   87 (245)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.45  E-value=0.00038  Score=58.78  Aligned_cols=81  Identities=14%  Similarity=0.163  Sum_probs=52.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHH-HHHHhc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~-i~~~~~  257 (288)
                      -.|++++|+|+++++|.+.++.+...|++|+++.+    ++++.+.    +++.+.... +  |-.+ ..++. +.+...
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAAR----TVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            36789999999999999999988899999999984    5555433    334454432 2  2222 12222 222222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|+|.|.
T Consensus        85 ~~g~id~lv~nAg~   98 (264)
T 3ucx_A           85 AYGRVDVVINNAFR   98 (264)
T ss_dssp             HTSCCSEEEECCCS
T ss_pred             HcCCCcEEEECCCC
Confidence            23459999999865

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.45  E-value=0.00094  Score=60.27  Aligned_cols=96  Identities=10%  Similarity=-0.026  Sum_probs=69.0

Q ss_pred             HHHHHHhh-cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007          176 ALRMLEDF-TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       176 a~~~l~~~-~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~  254 (288)
                      .+.++.+. ...-.|++|+|.|. |.+|..+++.++.+|++|+++.    .++.+.......|+.. .+     ++   +
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d----~dp~~a~~A~~~G~~v-v~-----Le---E  298 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTE----VDPICALQAAMDGFEV-VT-----LD---D  298 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SSHHHHHHHHHTTCEE-CC-----HH---H
T ss_pred             HHHHHHHhcCCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEe----CCcchhhHHHhcCcee-cc-----HH---H
Confidence            34444432 34568999999999 9999999999999999998886    3565554555566532 21     22   2


Q ss_pred             HhcCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                      +..   ..|+|+.+.|....  ...++.|++++.++
T Consensus       299 lL~---~ADIVv~atgt~~lI~~e~l~~MK~GAILI  331 (464)
T 3n58_A          299 AAS---TADIVVTTTGNKDVITIDHMRKMKDMCIVG  331 (464)
T ss_dssp             HGG---GCSEEEECCSSSSSBCHHHHHHSCTTEEEE
T ss_pred             HHh---hCCEEEECCCCccccCHHHHhcCCCCeEEE
Confidence            233   38999999987654  78899999998764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.45  E-value=0.00047  Score=58.14  Aligned_cols=81  Identities=17%  Similarity=0.074  Sum_probs=52.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcc-cHHH-HHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQL-EVKN-VKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~-i~~~~~~~g~~D~  264 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.+..   ++..+.+++.+...+ .|-.+. .++. +.+.....|++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC---CHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            468999999999999999998888999999998642   233445555554322 122221 2222 2222222335999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +|++.|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.44  E-value=0.0019  Score=48.97  Aligned_cols=91  Identities=11%  Similarity=-0.013  Sum_probs=64.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      .++|+|.|. |.+|...++.++..|.+|+++.    .++++.+.+++.|...+. .+....+.+.+..-.  +.|+++-+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid----~~~~~~~~~~~~g~~~i~-gd~~~~~~l~~a~i~--~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIE----TSRTRVDELRERGVRAVL-GNAANEEIMQLAHLE--CAKWLILT   78 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEE----SCHHHHHHHHHTTCEEEE-SCTTSHHHHHHTTGG--GCSEEEEC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEE----CCHHHHHHHHHcCCCEEE-CCCCCHHHHHhcCcc--cCCEEEEE
Confidence            468999999 9999999999999999999998    688999888888875443 333333344433212  38999999


Q ss_pred             CCcccHH----HHHhhccCCCee
Q 023007          269 VGGNSAS----KVLKFLRFREEQ  287 (288)
Q Consensus       269 ~g~~~~~----~a~~~l~~~G~~  287 (288)
                      ++++..+    ...+.+.+..++
T Consensus        79 ~~~~~~n~~~~~~a~~~~~~~~i  101 (140)
T 3fwz_A           79 IPNGYEAGEIVASARAKNPDIEI  101 (140)
T ss_dssp             CSCHHHHHHHHHHHHHHCSSSEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCeE
Confidence            9986542    223444455443

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.43  E-value=0.00042  Score=58.44  Aligned_cols=86  Identities=12%  Similarity=0.137  Sum_probs=53.5

Q ss_pred             CCCCCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCC--c-ccHHH-HHHHhc
Q 023007          185 TLNSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTES--Q-LEVKN-VKGLLA  257 (288)
Q Consensus       185 ~~~~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~--~-~~~~~-i~~~~~  257 (288)
                      ...++++|+|+|++  +++|...++.+...|++|+++.+.. ...+..+.+ ++.+...++.-+  + ..++. +.+...
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch-hhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            34578999999998  9999999998888999999998542 223333333 344432233222  1 12222 222222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|+|.|.
T Consensus        89 ~~g~id~lv~nAg~  102 (271)
T 3ek2_A           89 HWDSLDGLVHSIGF  102 (271)
T ss_dssp             HCSCEEEEEECCCC
T ss_pred             HcCCCCEEEECCcc
Confidence            23359999999984

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.43  E-value=0.00028  Score=59.89  Aligned_cols=80  Identities=13%  Similarity=0.113  Sum_probs=52.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEEEeC-C--c-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVFTE-S--Q-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v~~~-~--~-~~~~~-i~~~~~~  258 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+    .+++.+....+.. +  + ..++. +.+....
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGT----DPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCS----CHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999899999998873    555443    3344554433221 1  1 11222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus       101 ~g~iD~lv~nAg~  113 (271)
T 4ibo_A          101 GIDVDILVNNAGI  113 (271)
T ss_dssp             TCCCCEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            3359999999984

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.42  E-value=0.00046  Score=59.36  Aligned_cols=83  Identities=13%  Similarity=0.033  Sum_probs=50.6

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCCEEEeCCcc---cHHHHHH-HhcCCC
Q 023007          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQL---EVKNVKG-LLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~~v~~~~~~---~~~~i~~-~~~~~g  260 (288)
                      .|++++|+|++|  ++|.+.++.+...|++|+++.+... ..+.. +..++.+....+.-+-.   .++.+.+ .....|
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET-FKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999986  9999999888889999999885321 11222 22334443333322211   2222211 111123


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus       108 ~iD~lVnnAG~  118 (296)
T 3k31_A          108 SLDFVVHAVAF  118 (296)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            59999999984

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.42  E-value=0.00045  Score=58.50  Aligned_cols=80  Identities=15%  Similarity=0.144  Sum_probs=51.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEEE---eCCc-ccHHHH-HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEVF---TESQ-LEVKNV-KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~---~~~~-~~~~~i-~~~~~~  258 (288)
                      .+++++|+|+++++|.+.++.+...|++|+++.+    ++++.+.+    ++.+.....   |-.+ ..++.+ .+....
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   78 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGAR----RQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT   78 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999899999999984    55554433    344543222   2211 122221 112122


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus        79 ~g~iD~lVnnAG~   91 (264)
T 3tfo_A           79 WGRIDVLVNNAGV   91 (264)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999984

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.40  E-value=0.001  Score=56.30  Aligned_cols=81  Identities=16%  Similarity=0.242  Sum_probs=51.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEEEe-CC--c-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVFT-ES--Q-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v~~-~~--~-~~~~~-i~~~~~~  258 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.+.   +++..    +.+++.+....+. -+  + ..++. +.+....
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN---STKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999987642   33333    2334556543322 11  1 12222 1222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        94 ~g~id~lvnnAg~  106 (270)
T 3is3_A           94 FGHLDIAVSNSGV  106 (270)
T ss_dssp             HSCCCEEECCCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999884

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.39  E-value=0.00056  Score=58.99  Aligned_cols=81  Identities=20%  Similarity=0.164  Sum_probs=51.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEE-E--eCCc-ccHHHH-HHHhc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEV-F--TESQ-LEVKNV-KGLLA  257 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v-~--~~~~-~~~~~i-~~~~~  257 (288)
                      -.|++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+    +..+.... +  |-.+ ..++.+ .+...
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDV----DQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFR  104 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999899999999984    55554433    33444322 2  2111 112221 11111


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|+|.|.
T Consensus       105 ~~g~id~lvnnAg~  118 (301)
T 3tjr_A          105 LLGGVDVVFSNAGI  118 (301)
T ss_dssp             HHSSCSEEEECCCC
T ss_pred             hCCCCCEEEECCCc
Confidence            12259999999984

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.39  E-value=0.00052  Score=58.49  Aligned_cols=82  Identities=18%  Similarity=0.216  Sum_probs=50.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEEE---eCCc-ccHHH-HHHHh
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEVF---TESQ-LEVKN-VKGLL  256 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v~---~~~~-~~~~~-i~~~~  256 (288)
                      ...++++||+|+++++|.+.++.+...|++|+++.+    ++++.+.    +++.+....+   |-.+ ..++. +.+..
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCAR----DAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAV   96 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            346789999999999999999888889999999984    5555433    3344544322   2111 11222 22222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|++|++.|.
T Consensus        97 ~~~g~id~lv~nAg~  111 (279)
T 3sju_A           97 ERFGPIGILVNSAGR  111 (279)
T ss_dssp             HHHCSCCEEEECCCC
T ss_pred             HHcCCCcEEEECCCC
Confidence            222359999999984

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.39  E-value=0.00052  Score=58.29  Aligned_cols=83  Identities=23%  Similarity=0.226  Sum_probs=50.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-E--eCCc-ccHHHHHHHhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQ-LEVKNVKGLLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~--~~~~-~~~~~i~~~~~~~g~~D  263 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.. ..++..+.+++.+.... +  |-.+ ..++.+.+.....+++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            578999999999999999998889999999887421 11222233344443322 2  2111 12222222211123599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|++.|.
T Consensus       109 ~lv~nAg~  116 (273)
T 3uf0_A          109 VLVNNAGI  116 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.38  E-value=0.00055  Score=57.50  Aligned_cols=80  Identities=16%  Similarity=0.256  Sum_probs=51.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+    ++++.+.    +++.+.... +  |-.+ ..++. +.+....
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDL----KSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEES----SHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999998888888999999884    5554433    334454432 2  2111 12222 1112122


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        87 ~g~id~lv~nAg~   99 (256)
T 3gaf_A           87 FGKITVLVNNAGG   99 (256)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999984

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.38  E-value=0.00094  Score=55.75  Aligned_cols=80  Identities=18%  Similarity=0.108  Sum_probs=52.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCCCEEEeC---Cc-ccHHHH-HHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFTE---SQ-LEVKNV-KGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~~~v~~~---~~-~~~~~i-~~~~~~~g~  261 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.    .++++.+. .++++.......   .+ ..++.+ .+.....|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSD----INAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGG   80 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            578999999999999999999999999999987    45555543 345554433221   11 112221 111111235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        81 id~lv~nAg~   90 (247)
T 3rwb_A           81 IDILVNNASI   90 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.37  E-value=0.00069  Score=56.94  Aligned_cols=80  Identities=14%  Similarity=0.128  Sum_probs=50.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHHH-HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKNV-KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~i-~~~~~~  258 (288)
                      .|++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.    +++.+.... +  |-.+ ..++.+ .+....
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSR----NQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999988889999999884    5554432    233343321 2  2222 112221 111111


Q ss_pred             C-CCccEEEECCCc
Q 023007          259 L-PEPALGFNCVGG  271 (288)
Q Consensus       259 ~-g~~D~v~d~~g~  271 (288)
                      . +++|++|++.|.
T Consensus        84 ~~g~id~lv~~Ag~   97 (260)
T 2ae2_A           84 FHGKLNILVNNAGI   97 (260)
T ss_dssp             TTTCCCEEEECCCC
T ss_pred             cCCCCCEEEECCCC
Confidence            2 259999999983

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.37  E-value=0.00041  Score=58.42  Aligned_cols=84  Identities=12%  Similarity=0.148  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC--EEE--eCCc-ccHHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVF--TESQ-LEVKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~--~v~--~~~~-~~~~~-i~~~~~~~  259 (288)
                      +|++++|+|++|  ++|.+.++.+...|++|+++.+.....++..+.+++++..  ..+  |-.+ ..++. +.+.....
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            579999999876  8999999998899999999985322112222333455532  222  2222 22222 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|+++++.|.
T Consensus        85 G~iD~lvnnAg~   96 (256)
T 4fs3_A           85 GNIDGVYHSIAF   96 (256)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEecccc
Confidence            359999999873

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.37  E-value=0.0007  Score=51.03  Aligned_cols=77  Identities=12%  Similarity=0.125  Sum_probs=53.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      ++++|+|+|+ |.+|...++.+...|++|+++.    .++++.+.+++.+.. ++..+..+.+.+.+..-+  ++|+++.
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d----~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~--~~d~vi~   76 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVD----INEEKVNAYASYATH-AVIANATEENELLSLGIR--NFEYVIV   76 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEE----SCHHHHHTTTTTCSE-EEECCTTCHHHHHTTTGG--GCSEEEE
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHhCCE-EEEeCCCCHHHHHhcCCC--CCCEEEE
Confidence            3568999998 9999999999999999988887    467776666555553 332222223344433111  4999999


Q ss_pred             CCCcc
Q 023007          268 CVGGN  272 (288)
Q Consensus       268 ~~g~~  272 (288)
                      |++.+
T Consensus        77 ~~~~~   81 (144)
T 2hmt_A           77 AIGAN   81 (144)
T ss_dssp             CCCSC
T ss_pred             CCCCc
Confidence            99975

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.37  E-value=0.0013  Score=54.92  Aligned_cols=80  Identities=15%  Similarity=0.132  Sum_probs=50.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hC--C--CCEEE--eCCc-ccHHH-HHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GL--G--ADEVF--TESQ-LEVKN-VKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~--g--~~~v~--~~~~-~~~~~-i~~~  255 (288)
                      .+++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+.    +.  +  .-.++  |-.+ ..++. +.+.
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIA----RSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI   81 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEE----SCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence            568999999999999999988888899999998    4555554332    21  2  11222  2222 11222 1122


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|++|++.|.
T Consensus        82 ~~~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           82 HQKYGAVDILVNAAAM   97 (250)
T ss_dssp             HHHHCCEEEEEECCCC
T ss_pred             HHhcCCCCEEEECCCc
Confidence            1222359999999985

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.37  E-value=0.00052  Score=58.37  Aligned_cols=80  Identities=19%  Similarity=0.227  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.    +++.+.... +  |-.+ ..++. +.+....
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999984    5554432    233354322 2  2221 12222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        97 ~g~iD~lv~~Ag~  109 (277)
T 2rhc_B           97 YGPVDVLVNNAGR  109 (277)
T ss_dssp             TCSCSEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence            3359999999984

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.37  E-value=0.0013  Score=54.72  Aligned_cols=84  Identities=19%  Similarity=0.268  Sum_probs=50.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC-CCCCHHHHHHHHhCCCCE-EE--eCCcc-cHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD-RAGSDEAKEKLKGLGADE-VF--TESQL-EVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~-~~~~~~~~~~~~~~g~~~-v~--~~~~~-~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+. ....++..+.++..+... ++  |-.+. .++. +.+.....++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999888899999999864 221122223334444321 22  21111 1221 1111111224


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.36  E-value=0.00058  Score=57.49  Aligned_cols=81  Identities=21%  Similarity=0.191  Sum_probs=51.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEE-E--eCCc-ccHHH-HHHHhc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEV-F--TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v-~--~~~~-~~~~~-i~~~~~  257 (288)
                      -.++++||+|++|++|...++.+...|++|+++.+    ++++.+.+    ++.+.... +  |-.+ ..++. +.....
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTAR----DVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence            35789999999999999999888888999999984    55554433    34444322 2  2111 11222 111111


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|+|.|.
T Consensus       103 ~~g~id~lv~~Ag~  116 (262)
T 3rkr_A          103 AHGRCDVLVNNAGV  116 (262)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence            12359999999985

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.36  E-value=0.00079  Score=56.58  Aligned_cols=80  Identities=10%  Similarity=0.074  Sum_probs=52.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCCCEE-E--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEV-F--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .++++||+|++|++|.+.++.+...|++|+++.    .++++.+. .++++.... +  |-.+ ..++. +.+.....|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   82 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIAD----IDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGG   82 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999998888999999988    45555543 345554322 2  2222 12222 2222223335


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        83 id~lv~~Ag~   92 (259)
T 4e6p_A           83 LDILVNNAAL   92 (259)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.36  E-value=0.00054  Score=57.34  Aligned_cols=86  Identities=19%  Similarity=0.106  Sum_probs=52.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc-CCCCCHHHHHHHHhCCCCE-EEeCC--c-ccHHH-HHHHhcCC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR-DRAGSDEAKEKLKGLGADE-VFTES--Q-LEVKN-VKGLLANL  259 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~~~~g~~~-v~~~~--~-~~~~~-i~~~~~~~  259 (288)
                      ..+++++||+|+++++|.+.++.+...|++|+++.+ .....++..+.+++.+.+. ++..+  + ..++. +.+.....
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            456789999999999999999888889999998873 2222233344445555432 22222  1 12222 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|++.|.
T Consensus        90 g~id~lv~~Ag~  101 (256)
T 3ezl_A           90 GEIDVLVNNAGI  101 (256)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            359999999884

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.36  E-value=0.00043  Score=58.17  Aligned_cols=80  Identities=11%  Similarity=0.155  Sum_probs=51.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEE-E--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEV-F--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v-~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.    .++++.+.+.    +.+.... +  |-.+ ..++. +.+....
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITG----RTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999988    4566554432    2333322 2  2111 12222 1112222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus        81 ~g~id~lv~nAg~   93 (257)
T 3imf_A           81 FGRIDILINNAAG   93 (257)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999983

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.35  E-value=0.0012  Score=55.36  Aligned_cols=79  Identities=19%  Similarity=0.174  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC--c-ccHHH-HHHHhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES--Q-LEVKN-VKGLLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~--~-~~~~~-i~~~~~~~g~~D  263 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+.    +++.+..++++. .++.-+  + ..++. +.+.....|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD   79 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR----PEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVD   79 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS----TTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----hhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999988899999998854    222333334432 333222  2 11222 111111123599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|+|.|.
T Consensus        80 ~lv~~Ag~   87 (256)
T 2d1y_A           80 VLVNNAAI   87 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.35  E-value=0.00057  Score=58.75  Aligned_cols=84  Identities=17%  Similarity=0.168  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC-CE-EE--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-DE-VF--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~-~~-v~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .|++++|+|++|++|.+.++.+...|++|+++.+.....++..+.+++.+. .. .+  |-.+ ..++. +.+.....|+
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999998542222222233334442 21 22  2111 12222 1112222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus       120 iD~lvnnAg~  129 (293)
T 3rih_A          120 LDVVCANAGI  129 (293)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.35  E-value=0.00038  Score=59.28  Aligned_cols=80  Identities=19%  Similarity=0.217  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCC--EE--E--eCCc-ccHHH-HHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD--EV--F--TESQ-LEVKN-VKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~--~v--~--~~~~-~~~~~-i~~~  255 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+    .+++.+..  .+  +  |-.+ ..++. +.+.
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGR----NPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            5789999999999999999988899999999884    555443    33444431  22  1  2111 11222 2222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|++|+|.|.
T Consensus        86 ~~~~g~id~lv~nAg~  101 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            2222359999999985

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.35  E-value=0.0017  Score=54.30  Aligned_cols=82  Identities=17%  Similarity=0.140  Sum_probs=51.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE---eCCc-ccHHHH-HHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF---TESQ-LEVKNV-KGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~---~~~~-~~~~~i-~~~~~~~g~~  262 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+..  .++..+.+++.+....+   |-.+ ..++.+ .+.....|++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD--PAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999988999999987643  23334445555544322   2111 112221 1111112259


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|++.|.
T Consensus        81 d~lv~~Ag~   89 (255)
T 2q2v_A           81 DILVNNAGI   89 (255)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.35  E-value=0.0002  Score=59.96  Aligned_cols=80  Identities=18%  Similarity=0.295  Sum_probs=51.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EE--EeCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EV--FTESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v--~~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ +.++.. ..  .|-.+ ..++. +.+.....|+
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTA----TSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGG   83 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999998    456555443 333322 11  22222 12222 1222222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        84 iD~lv~nAg~   93 (248)
T 3op4_A           84 VDILVNNAGI   93 (248)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.35  E-value=0.00075  Score=57.21  Aligned_cols=80  Identities=13%  Similarity=0.135  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHHHH-HHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKNVK-GLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~i~-~~~~~  258 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.    +++.+.... +  |-.+ ..++.+. +....
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR----NEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999984    5554432    233454322 2  2211 1122211 11111


Q ss_pred             C-CCccEEEECCCc
Q 023007          259 L-PEPALGFNCVGG  271 (288)
Q Consensus       259 ~-g~~D~v~d~~g~  271 (288)
                      . +++|++|++.|.
T Consensus        96 ~~g~id~lv~nAg~  109 (273)
T 1ae1_A           96 FDGKLNILVNNAGV  109 (273)
T ss_dssp             TTSCCCEEEECCCC
T ss_pred             cCCCCcEEEECCCC
Confidence            1 259999999984

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.34  E-value=0.0017  Score=49.00  Aligned_cols=78  Identities=13%  Similarity=0.056  Sum_probs=57.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      .++++|+|+ |.+|...++.+...|.+|+++.    .++++.+.+++.+... +..+..+.+.+.+..- . ++|++|.+
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id----~~~~~~~~~~~~~~~~-~~gd~~~~~~l~~~~~-~-~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVD----KSKEKIELLEDEGFDA-VIADPTDESFYRSLDL-E-GVSAVLIT   77 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEE----SCHHHHHHHHHTTCEE-EECCTTCHHHHHHSCC-T-TCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEE----CCHHHHHHHHHCCCcE-EECCCCCHHHHHhCCc-c-cCCEEEEe
Confidence            468999999 9999999999999999999998    5788888888777643 3333333344444321 2 49999999


Q ss_pred             CCcccH
Q 023007          269 VGGNSA  274 (288)
Q Consensus       269 ~g~~~~  274 (288)
                      +++...
T Consensus        78 ~~~~~~   83 (141)
T 3llv_A           78 GSDDEF   83 (141)
T ss_dssp             CSCHHH
T ss_pred             cCCHHH
Confidence            996544

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.34  E-value=0.00067  Score=56.65  Aligned_cols=77  Identities=12%  Similarity=0.047  Sum_probs=50.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEE-EeCC--c-ccH----HHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEV-FTES--Q-LEV----KNVKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v-~~~~--~-~~~----~~i~~~  255 (288)
                      .+++++|+|+++++|...++.+...|++|+++.+    ++++.+.+    ++.+.... +.-+  + ..+    +.+.+.
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADI----NAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999884    55554433    33343322 2211  1 112    222222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      .   +++|++|+|.|.
T Consensus        84 ~---g~id~li~~Ag~   96 (253)
T 3qiv_A           84 F---GGIDYLVNNAAI   96 (253)
T ss_dssp             H---SCCCEEEECCCC
T ss_pred             c---CCCCEEEECCCc
Confidence            2   259999999985

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.34  E-value=0.00031  Score=61.17  Aligned_cols=80  Identities=14%  Similarity=0.121  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCC--C-EEE--eCCc-ccHHH-HHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGA--D-EVF--TESQ-LEVKN-VKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~--~-~v~--~~~~-~~~~~-i~~~~  256 (288)
                      .|++|||+|++|++|...++.+...|++|+++.+    ++++.+.+    +..+.  . .++  |-.+ ..++. +....
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADI----RQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            5789999999999999999988889999999984    55554433    22232  2 222  2222 11222 22222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...+++|++|++.|.
T Consensus        83 ~~~g~id~lv~nAg~   97 (319)
T 3ioy_A           83 ARFGPVSILCNNAGV   97 (319)
T ss_dssp             HHTCCEEEEEECCCC
T ss_pred             HhCCCCCEEEECCCc
Confidence            222359999999983

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.34  E-value=0.0006  Score=57.36  Aligned_cols=82  Identities=13%  Similarity=0.167  Sum_probs=51.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-EeCC--c-ccHHHH-HHHhc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-FTES--Q-LEVKNV-KGLLA  257 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~~~~--~-~~~~~i-~~~~~  257 (288)
                      .+++++||+|++|++|.+.++.+...|++|+++.+   .++++.+.    +++.+.... +.-+  + ..++.+ .+...
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~---r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYA---RSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDE   78 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999998732   34544433    334554432 2211  1 122221 11112


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|+|.|.
T Consensus        79 ~~g~id~lv~nAg~   92 (258)
T 3oid_A           79 TFGRLDVFVNNAAS   92 (258)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence            22359999999973

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.33  E-value=0.00093  Score=55.88  Aligned_cols=80  Identities=13%  Similarity=0.146  Sum_probs=50.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCCcccHHHHHH----HhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTESQLEVKNVKG----LLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~~~~~~~i~~----~~~~  258 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+    .+++.+... ++..+-.+.+.+.+    ....
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADL----DEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999988889999999984    444433    233344332 22221111122221    1111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus        88 ~~~id~vi~~Ag~  100 (260)
T 3awd_A           88 EGRVDILVACAGI  100 (260)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1249999999873

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.33  E-value=0.0017  Score=54.70  Aligned_cols=83  Identities=18%  Similarity=0.180  Sum_probs=53.3

Q ss_pred             CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEE--eCCc-ccHHH-HHHHhcCCC
Q 023007          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVF--TESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~--~~~~-~~~~~-i~~~~~~~g  260 (288)
                      .+++++|+|++  |++|.+.++.+...|++|+++.+.. ..++..+.+. +.+...++  |-.+ ..++. +.+.....|
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999998  9999999998888999999998643 2334444443 33432333  2222 12222 222333344


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|++.|.
T Consensus        87 ~iD~lv~~Ag~   97 (265)
T 1qsg_A           87 KFDGFVHSIGF   97 (265)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.32  E-value=0.00072  Score=56.98  Aligned_cols=80  Identities=18%  Similarity=0.190  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCC-C-EEEeCC--c-ccHHHH-HHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGA-D-EVFTES--Q-LEVKNV-KGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~-~-~v~~~~--~-~~~~~i-~~~~~  257 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+    ++++.+.    +++.+. . ..+.-+  + ..++.+ .+...
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGR----STADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999899999999984    5555433    334442 2 222211  1 122221 11212


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|+|.|.
T Consensus        85 ~~g~id~lvnnAg~   98 (262)
T 3pk0_A           85 EFGGIDVVCANAGV   98 (262)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HhCCCCEEEECCCC
Confidence            22359999999984

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.31  E-value=0.00068  Score=57.40  Aligned_cols=80  Identities=20%  Similarity=0.205  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+.    +++.+... ++  |-.+ ..++. +.+....
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI----NKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEc----CHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999884    4554433    33345432 22  2111 11222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus       106 ~g~iD~li~~Ag~  118 (272)
T 1yb1_A          106 IGDVSILVNNAGV  118 (272)
T ss_dssp             TCCCSEEEECCCC
T ss_pred             CCCCcEEEECCCc
Confidence            2359999999984

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.31  E-value=0.00097  Score=56.86  Aligned_cols=80  Identities=18%  Similarity=0.189  Sum_probs=49.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC--EEE--eCCc-ccHHHH-HHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD--EVF--TESQ-LEVKNV-KGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~--~v~--~~~~-~~~~~i-~~~~~  257 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+.+    .+.+..  ..+  |-.+ ..++.+ .+...
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGR----RPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999998889999999984    55554433    222221  222  2222 122221 11111


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|+|.|.
T Consensus       108 ~~g~iD~lvnnAG~  121 (281)
T 4dry_A          108 EFARLDLLVNNAGS  121 (281)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence            22359999999984

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.31  E-value=0.00052  Score=58.40  Aligned_cols=79  Identities=20%  Similarity=0.148  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC---CCCEE-E--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL---GADEV-F--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~---g~~~v-~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ +++   + ... +  |-.+ ..++. +.+....
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~----r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICA----RDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999987    455554432 222   3 211 1  1111 11222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus       103 ~g~iD~lvnnAg~  115 (276)
T 2b4q_A          103 SARLDILVNNAGT  115 (276)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            3359999999983

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.30  E-value=0.0015  Score=57.22  Aligned_cols=82  Identities=18%  Similarity=0.186  Sum_probs=55.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH---HhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL---KGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      ..+|||+|++|.+|...++.+...|.+|+++++....++++.+.+   ...+...+ ..+-.+.+.+.+.....+ +|+|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~-~~Dl~d~~~l~~~~~~~~-~d~V   87 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIV-YGLINEQEAMEKILKEHE-IDIV   87 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHHHTT-CCEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEE-EeecCCHHHHHHHHhhCC-CCEE
Confidence            358999999999999999999999999999997643344555433   34455433 222223345555544223 9999


Q ss_pred             EECCCcc
Q 023007          266 FNCVGGN  272 (288)
Q Consensus       266 ~d~~g~~  272 (288)
                      |.+.+..
T Consensus        88 i~~a~~~   94 (346)
T 3i6i_A           88 VSTVGGE   94 (346)
T ss_dssp             EECCCGG
T ss_pred             EECCchh
Confidence            9999864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.30  E-value=0.00073  Score=57.72  Aligned_cols=80  Identities=19%  Similarity=0.265  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEE-E--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEV-F--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v-~--~~~~-~~~~~-i~~~~~~  258 (288)
                      ++++++|+|+++++|.+.++.+...|++|+++.+    ++++.+.+    ++.+.... +  |-.+ ..++. +.+....
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGR----TRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999998899999999984    55554433    23343322 2  2111 12222 1112122


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus       103 ~g~iD~lVnnAg~  115 (283)
T 3v8b_A          103 FGHLDIVVANAGI  115 (283)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence            2359999999984

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.29  E-value=0.0024  Score=53.17  Aligned_cols=80  Identities=19%  Similarity=0.164  Sum_probs=50.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEE-E--eCCc-ccHHHH-HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEV-F--TESQ-LEVKNV-KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v-~--~~~~-~~~~~i-~~~~~~  258 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+    +..+.... +  |-.+ ..++.+ .+....
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAAR----RVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999998889999999884    55554432    23354322 2  2222 122221 111111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        82 ~g~id~lv~nAg~   94 (247)
T 2jah_A           82 LGGLDILVNNAGI   94 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2259999999884

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.29  E-value=0.0011  Score=55.84  Aligned_cols=80  Identities=18%  Similarity=0.206  Sum_probs=51.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCE-EE--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-VF--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~-v~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ ++++... .+  |-.+ ..++. +.+.....|+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVD----REERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGR   80 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999989999999998    456665544 4554322 12  2222 11222 1111122235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        81 iD~lvnnAg~   90 (263)
T 2a4k_A           81 LHGVAHFAGV   90 (263)
T ss_dssp             CCEEEEGGGG
T ss_pred             CcEEEECCCC
Confidence            9999999874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.28  E-value=0.00093  Score=56.16  Aligned_cols=78  Identities=12%  Similarity=0.106  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EEeCCcccHHHH-------HHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VFTESQLEVKNV-------KGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~~~~~~~~~~i-------~~~  255 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+.    +++.+... ++..+-.+.+.+       .+.
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR----NEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999984    5544432    23334332 222221111222       222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      .++  ++|++|++.|.
T Consensus        89 ~~~--~id~li~~Ag~  102 (266)
T 1xq1_A           89 FGG--KLDILINNLGA  102 (266)
T ss_dssp             HTT--CCSEEEEECCC
T ss_pred             hCC--CCcEEEECCCC
Confidence            213  59999999884

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.28  E-value=0.0019  Score=54.07  Aligned_cols=80  Identities=16%  Similarity=0.071  Sum_probs=51.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCCCEE-E--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEV-F--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+. .++++.... +  |-.+ ..++. +.+.....|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLAD----VLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999998    45555543 345553322 2  2221 12222 2212122225


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        80 iD~lv~nAg~   89 (254)
T 1hdc_A           80 VDGLVNNAGI   89 (254)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.28  E-value=0.0027  Score=53.26  Aligned_cols=80  Identities=16%  Similarity=0.123  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EEE--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVF--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ +++... ..+  |-.+ ..++. +.+.....|+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIAD----LDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999988    456555444 344321 222  2222 12222 1111111225


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        87 iD~lv~~Ag~   96 (263)
T 3ak4_A           87 FDLLCANAGV   96 (263)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999983

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.28  E-value=0.00076  Score=56.52  Aligned_cols=79  Identities=16%  Similarity=0.090  Sum_probs=50.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCE-EE--eCCc-ccHHH-HHHHhcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADE-VF--TESQ-LEVKN-VKGLLANL  259 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~~  259 (288)
                      +++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.    ++..+... .+  |-.+ ..++. +.+.....
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADY----NDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL   77 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999884    5554432    23334332 22  2222 12222 22222222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|++|++.|.
T Consensus        78 g~id~lv~nAg~   89 (256)
T 1geg_A           78 GGFDVIVNNAGV   89 (256)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            359999999973

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.28  E-value=0.00032  Score=58.87  Aligned_cols=75  Identities=8%  Similarity=-0.117  Sum_probs=48.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH---HHhCCCCEEEeCCcccH----HHHHHHhcCCCCc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK---LKGLGADEVFTESQLEV----KNVKGLLANLPEP  262 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~---~~~~g~~~v~~~~~~~~----~~i~~~~~~~g~~  262 (288)
                      ++++|+|++|++|.+.++.+...|++|+++.+.    +++.+.   +++.+.+.... +...+    +.+.+..   +++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~l~~~~~~~~~~-d~~~v~~~~~~~~~~~---g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDES----FKQKDELEAFAETYPQLKPM-SEQEPAELIEAVTSAY---GQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGG----GGSHHHHHHHHHHCTTSEEC-CCCSHHHHHHHHHHHH---SCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHHHhcCCcEEEE-CHHHHHHHHHHHHHHh---CCC
Confidence            579999999999999999999999999998754    333222   33334332221 22222    2333322   259


Q ss_pred             cEEEECCCcc
Q 023007          263 ALGFNCVGGN  272 (288)
Q Consensus       263 D~v~d~~g~~  272 (288)
                      |++|++.|..
T Consensus        74 D~lv~nAg~~   83 (254)
T 1zmt_A           74 DVLVSNDIFA   83 (254)
T ss_dssp             CEEEEECCCC
T ss_pred             CEEEECCCcC
Confidence            9999998843

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.28  E-value=0.0016  Score=54.50  Aligned_cols=81  Identities=14%  Similarity=0.120  Sum_probs=51.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhC-C-CCEE--EeC--C-cccHHH-HHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGL-G-ADEV--FTE--S-QLEVKN-VKG  254 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~-g-~~~v--~~~--~-~~~~~~-i~~  254 (288)
                      -.|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+    ++. + ...+  .|-  . ...++. +.+
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLG----RNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR   85 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH
Confidence            3578999999999999999998888999999988    455554433    221 1 1122  222  1 112222 222


Q ss_pred             HhcCCCCccEEEECCCc
Q 023007          255 LLANLPEPALGFNCVGG  271 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~  271 (288)
                      .....|++|++|++.|.
T Consensus        86 ~~~~~g~id~lv~nAg~  102 (252)
T 3f1l_A           86 IAVNYPRLDGVLHNAGL  102 (252)
T ss_dssp             HHHHCSCCSEEEECCCC
T ss_pred             HHHhCCCCCEEEECCcc
Confidence            22223359999999984

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.27  E-value=0.00092  Score=55.67  Aligned_cols=81  Identities=19%  Similarity=0.283  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCc-ccHHHH-HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQ-LEVKNV-KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~-~~~~~i-~~~~~~  258 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+.   ++++.+    .+++.+.... +  |-.+ ..++.+ .+....
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAG---NEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999998841   444443    2333454322 2  2222 122221 111111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        80 ~g~id~lv~nAg~   92 (246)
T 2uvd_A           80 FGQVDILVNNAGV   92 (246)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2259999999984

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.27  E-value=0.00056  Score=58.01  Aligned_cols=80  Identities=19%  Similarity=0.210  Sum_probs=50.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC-EEE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EVF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~-~v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .++++||+|+++++|.+.++.+...|++|+++.+    ++++.+.    +++.+.. ..+  |-.+ ..++. +.+....
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTAT----TEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE  102 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999988889999999984    5554433    2333432 222  2222 12222 1112122


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus       103 ~g~iD~lvnnAg~  115 (270)
T 3ftp_A          103 FGALNVLVNNAGI  115 (270)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999983

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.27  E-value=0.00059  Score=58.23  Aligned_cols=80  Identities=15%  Similarity=0.177  Sum_probs=50.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-Hh---CCCCEEEeC---Cc-ccHHHHH-HHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KG---LGADEVFTE---SQ-LEVKNVK-GLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~---~g~~~v~~~---~~-~~~~~i~-~~~~~  258 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++   .+....+..   .+ ..++.+. +....
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTA----RNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECC----SCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999889999999887    455555433 22   343322211   11 1122211 11112


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus        83 ~g~iD~lvnnAg~   95 (280)
T 3tox_A           83 FGGLDTAFNNAGA   95 (280)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999983

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.27  E-value=0.0018  Score=54.85  Aligned_cols=81  Identities=16%  Similarity=0.136  Sum_probs=51.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EEE--eCCc-ccHHH-HHHHhcCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVF--TESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v~--~~~~-~~~~~-i~~~~~~~g  260 (288)
                      ..++++||+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++.. .++  |-.+ ..++. +.+.....|
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAG----RRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999889999999988    456555433 445432 222  2222 12222 111112223


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus       102 ~iD~lVnnAg~  112 (272)
T 4dyv_A          102 RVDVLFNNAGT  112 (272)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            59999999984

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.27  E-value=0.00072  Score=58.87  Aligned_cols=84  Identities=18%  Similarity=0.172  Sum_probs=52.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC-----CCCHHHH----HHHHhCCCCEEEeCCcc-cHHH-HHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR-----AGSDEAK----EKLKGLGADEVFTESQL-EVKN-VKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~-----~~~~~~~----~~~~~~g~~~v~~~~~~-~~~~-i~~~~  256 (288)
                      .|++++|+|++|++|...++.+...|++|++.....     .++.++.    +.++..+...+.|..+. .++. +.+..
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            578999999999999999999888999999864210     0233333    23344454444554332 2222 22222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...+++|++|++.|.
T Consensus        88 ~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            223359999999983

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.27  E-value=0.00055  Score=57.94  Aligned_cols=80  Identities=14%  Similarity=0.038  Sum_probs=50.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHH-HHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKN-VKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~-i~~~~~~~g~~D~  264 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+.......+ .|-.+ ..++. +.+.....|++|+
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLA----RRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEE----SCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            468999999999999999999999999999998    46655543321111111 12222 12222 1112222235999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +|+|.|.
T Consensus        91 lvnnAg~   97 (266)
T 3p19_A           91 IVNNAGM   97 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999984

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.26  E-value=0.001  Score=55.82  Aligned_cols=80  Identities=11%  Similarity=0.036  Sum_probs=49.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHHHHH----HHHhCCCC-EEEeCC--c-ccHHH-HHHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKE----KLKGLGAD-EVFTES--Q-LEVKN-VKGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~----~~~~~g~~-~v~~~~--~-~~~~~-i~~~~~  257 (288)
                      ++++++|+|++|++|...++.+.. .|++|+++.+    +.++.+    .++..+.. .++.-+  + ..++. +.+...
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR----DVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES----SHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeC----ChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            578999999999999998888877 8999999984    444433    22333432 222222  1 11221 111111


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..+++|++|+|.|.
T Consensus        79 ~~g~id~li~~Ag~   92 (276)
T 1wma_A           79 EYGGLDVLVNNAGI   92 (276)
T ss_dssp             HHSSEEEEEECCCC
T ss_pred             hcCCCCEEEECCcc
Confidence            12249999999874

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.26  E-value=0.0016  Score=52.78  Aligned_cols=71  Identities=18%  Similarity=0.258  Sum_probs=48.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      +|||+|++|.+|...++.+...|.+|+++.+    ++++.+.+. .+.. ++..+-.+.+.  +...   ++|+||+|.|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R----~~~~~~~~~-~~~~-~~~~D~~d~~~--~~~~---~~d~vi~~ag   70 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVR----NAGKITQTH-KDIN-ILQKDIFDLTL--SDLS---DQNVVVDAYG   70 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CSHHHHHHC-SSSE-EEECCGGGCCH--HHHT---TCSEEEECCC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEc----Cchhhhhcc-CCCe-EEeccccChhh--hhhc---CCCEEEECCc
Confidence            6999999999999999999999999999994    555554443 2333 22222111112  2223   3999999998


Q ss_pred             cc
Q 023007          271 GN  272 (288)
Q Consensus       271 ~~  272 (288)
                      ..
T Consensus        71 ~~   72 (221)
T 3ew7_A           71 IS   72 (221)
T ss_dssp             SS
T ss_pred             CC
Confidence            63

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.26  E-value=0.00069  Score=56.81  Aligned_cols=81  Identities=15%  Similarity=0.192  Sum_probs=46.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-EEE--eCCc-ccHHHH-HHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQ-LEVKNV-KGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~--~~~~-~~~~~i-~~~~~~~g~~  262 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+...   ...+..++++.. ..+  |-.+ ..++.+ .+.....|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPP---AGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHV   82 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999986432   112233344432 222  2111 122221 1111222359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|++.|.
T Consensus        83 d~lv~nAg~   91 (257)
T 3tpc_A           83 HGLVNCAGT   91 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.26  E-value=0.0026  Score=53.43  Aligned_cols=80  Identities=20%  Similarity=0.267  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC----CCCEE-E--eCCcc-cHHHH-HHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GADEV-F--TESQL-EVKNV-KGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----g~~~v-~--~~~~~-~~~~i-~~~~~  257 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+ +++    +.... +  |-.+. .++.+ .+...
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR----QVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999989999999884    55554332 222    43322 2  22221 12221 11111


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|+|.|.
T Consensus        82 ~~g~id~lv~~Ag~   95 (263)
T 3ai3_A           82 SFGGADILVNNAGT   95 (263)
T ss_dssp             HHSSCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence            12259999999984

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.26  E-value=0.00077  Score=56.33  Aligned_cols=72  Identities=17%  Similarity=0.174  Sum_probs=47.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCC-CCccEEEEC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL-PEPALGFNC  268 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~-g~~D~v~d~  268 (288)
                      ++++|+|++|++|...++.+...|++|+++.+..    ++.+      ..  +.-+-.+.+.+.++.... +++|++|+|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~----~~~~------~~--~~~Dl~~~~~v~~~~~~~~~~id~lv~~   69 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD----AEVI------AD--LSTAEGRKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS----SSEE------CC--TTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc----hhhc------cc--cccCCCCHHHHHHHHHHhCCCCCEEEEC
Confidence            4799999999999999999988999999998542    2111      00  000001123444444443 469999999


Q ss_pred             CCccc
Q 023007          269 VGGNS  273 (288)
Q Consensus       269 ~g~~~  273 (288)
                      .|...
T Consensus        70 Ag~~~   74 (257)
T 1fjh_A           70 AGLGP   74 (257)
T ss_dssp             CCCCT
T ss_pred             CCCCC
Confidence            98543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.25  E-value=0.0014  Score=55.31  Aligned_cols=80  Identities=16%  Similarity=0.155  Sum_probs=53.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCCCEEEe-CC--c-ccHHHHHH-HhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGADEVFT-ES--Q-LEVKNVKG-LLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~~~v~~-~~--~-~~~~~i~~-~~~~~g~  261 (288)
                      .|++++|+|++|++|.+.++.+...|++|+++.    .++++.+. .++++....+. -+  + ..++.+.+ .....++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHG----TREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEG  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999988    45665543 34566543321 11  1 12222211 1112235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus       102 iD~lvnnAg~  111 (266)
T 3grp_A          102 IDILVNNAGI  111 (266)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.25  E-value=0.00099  Score=56.37  Aligned_cols=81  Identities=15%  Similarity=0.197  Sum_probs=51.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-EeCCcc---cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTESQL---EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~~~~~~---~~~~-i~~~~~~  258 (288)
                      .|++++|+|+++++|...++.+...|++|+++.+.   +++..+    .+++.+.... +..+-.   .++. +.+....
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS---NAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            57899999999999999998888899999999853   333333    3344554432 222211   1221 2222111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus       105 ~g~id~li~nAg~  117 (271)
T 4iin_A          105 DGGLSYLVNNAGV  117 (271)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2259999999985

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.25  E-value=0.00074  Score=57.93  Aligned_cols=81  Identities=15%  Similarity=0.155  Sum_probs=50.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCC--EE--EeCCc--ccHHHHHH-H
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD--EV--FTESQ--LEVKNVKG-L  255 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~--~v--~~~~~--~~~~~i~~-~  255 (288)
                      ..+++++|+|+++++|.+.++.+...|++|+++.+    ++++.+    .+++.+..  .+  .|-.+  ..++.+.+ .
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCR----DVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHH
Confidence            45789999999999999999988889999999994    555433    33333322  11  22222  12222222 1


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....+++|++|+|.|.
T Consensus        86 ~~~~g~iD~lv~nAg~  101 (311)
T 3o26_A           86 KTHFGKLDILVNNAGV  101 (311)
T ss_dssp             HHHHSSCCEEEECCCC
T ss_pred             HHhCCCCCEEEECCcc
Confidence            1111259999999985

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.25  E-value=0.00096  Score=56.48  Aligned_cols=81  Identities=17%  Similarity=0.165  Sum_probs=51.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.   ++++.+    .+++.+.... +  |-.+ ..++. +.+....
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYAS---SAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---ChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999988999999988742   344433    3344554432 2  2112 12222 1112122


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus       104 ~g~id~lv~nAg~  116 (269)
T 4dmm_A          104 WGRLDVLVNNAGI  116 (269)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999885

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.25  E-value=0.0024  Score=52.52  Aligned_cols=79  Identities=11%  Similarity=0.131  Sum_probs=50.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCC--c-ccHHHH-HHHhcCCCCcc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTES--Q-LEVKNV-KGLLANLPEPA  263 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~--~-~~~~~i-~~~~~~~g~~D  263 (288)
                      +++++|+|++|++|...++.+...|++|+++.    .++++.+.+ ++++-...+..+  + ..++.+ .......+++|
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMA----RDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999989999999998    455555443 344322233222  2 112221 11111112499


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|++.|.
T Consensus        81 ~li~~Ag~   88 (234)
T 2ehd_A           81 ALVNNAGV   88 (234)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999883

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.25  E-value=0.001  Score=55.92  Aligned_cols=80  Identities=19%  Similarity=0.210  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEE-E--eCCcc-cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEV-F--TESQL-EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v-~--~~~~~-~~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+    ++.+.... +  |-.+. .++. +.+....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM----NREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999884    55544332    33354322 2  22221 1221 1111111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus        82 ~g~id~lv~nAg~   94 (262)
T 1zem_A           82 FGKIDFLFNNAGY   94 (262)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence            2259999999874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.24  E-value=0.0014  Score=54.93  Aligned_cols=79  Identities=19%  Similarity=0.116  Sum_probs=49.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-EE--eCCc-ccHHHHHH-HhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VF--TESQ-LEVKNVKG-LLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~--~~~~-~~~~~i~~-~~~~  258 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+    +..+... .+  |-.+ ..++.+.+ ....
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGR----HLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999884    55554332    2224322 12  2111 12222222 1111


Q ss_pred             -CCCccEEEECCC
Q 023007          259 -LPEPALGFNCVG  270 (288)
Q Consensus       259 -~g~~D~v~d~~g  270 (288)
                       .|++|++|++.|
T Consensus        80 ~~g~id~lvnnAg   92 (260)
T 2qq5_A           80 QQGRLDVLVNNAY   92 (260)
T ss_dssp             HTTCCCEEEECCC
T ss_pred             cCCCceEEEECCc
Confidence             235999999994

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.24  E-value=0.0024  Score=52.53  Aligned_cols=80  Identities=16%  Similarity=0.133  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-H----hCCCCEE-EeCCcccHHHHHHHhc----
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-K----GLGADEV-FTESQLEVKNVKGLLA----  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~----~~g~~~v-~~~~~~~~~~i~~~~~----  257 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+    ++++.+.+ +    ..+.... +.-+-.+.+.+.++..    
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGAR----SVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE   76 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999984    55554432 1    3344322 2212122222222211    


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|++.|.
T Consensus        77 ~~g~id~li~~Ag~   90 (235)
T 3l77_A           77 RFGDVDVVVANAGL   90 (235)
T ss_dssp             HHSSCSEEEECCCC
T ss_pred             hcCCCCEEEECCcc
Confidence            11259999999984

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.24  E-value=0.0022  Score=54.26  Aligned_cols=80  Identities=16%  Similarity=0.180  Sum_probs=51.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCC--c-ccHHHH-HHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTES--Q-LEVKNV-KGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~--~-~~~~~i-~~~~~~~g~~  262 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ +++.....+.-+  + ..++.+ .+.....|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICD----KDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999988    456655444 344322222222  1 112221 1111112359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|+|.|.
T Consensus        84 D~lv~nAg~   92 (270)
T 1yde_A           84 DCVVNNAGH   92 (270)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.24  E-value=0.0011  Score=55.19  Aligned_cols=77  Identities=9%  Similarity=-0.038  Sum_probs=49.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEE-E--cCCCCCHHHHH-HHHhC-CCCEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINI-I--RDRAGSDEAKE-KLKGL-GADEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~-~--~~~~~~~~~~~-~~~~~-g~~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      |++++|+|++|++|.+.++.+...|++|+++ .  +    ++++.+ ..+++ +. .+.+...- .+.+.+.....|++|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r----~~~~~~~~~~~~~~~-~~~~~~~v-~~~~~~~~~~~g~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFA----DAAERQRFESENPGT-IALAEQKP-ERLVDATLQHGEAID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGG----SHHHHHHHHHHSTTE-EECCCCCG-GGHHHHHGGGSSCEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcC----CHHHHHHHHHHhCCC-cccCHHHH-HHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999888 4  5    344443 33445 32 23322221 122233333334599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|++.|.
T Consensus        75 ~lv~~Ag~   82 (244)
T 1zmo_A           75 TIVSNDYI   82 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999983

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.23  E-value=0.0017  Score=55.00  Aligned_cols=80  Identities=14%  Similarity=0.220  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCC-CEE--E--eCCc-ccHHHH-HHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGA-DEV--F--TESQ-LEVKNV-KGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~-~~v--~--~~~~-~~~~~i-~~~~  256 (288)
                      .++++||+|++|++|...++.+...|++|+++.+    ++++.+.    ++..+. ..+  +  |-.+ ..++.+ .+..
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCAR----TVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC----ChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            4689999999999999999998889999999984    5554433    333442 122  2  2111 112221 1111


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...+++|++|+|.|.
T Consensus       107 ~~~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          107 SQHSGVDICINNAGL  121 (279)
T ss_dssp             HHHCCCSEEEECCCC
T ss_pred             HhCCCCCEEEECCCC
Confidence            112259999999984

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.23  E-value=0.0029  Score=52.69  Aligned_cols=82  Identities=18%  Similarity=0.168  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-E--eCCc-ccHHHH-HHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQ-LEVKNV-KGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~--~~~~-~~~~~i-~~~~~~~g~~  262 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+..  .++..+.+++.+.... +  |-.+ ..++.+ .+.....+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--CHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc--hhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999998531  1222234555664322 2  2222 122221 1111112259


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|++.|.
T Consensus        84 d~lv~nAg~   92 (249)
T 2ew8_A           84 DILVNNAGI   92 (249)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.23  E-value=0.0022  Score=53.81  Aligned_cols=79  Identities=15%  Similarity=0.145  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC-----CCC-EEE--eCCc-ccHHH-HHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL-----GAD-EVF--TESQ-LEVKN-VKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~-----g~~-~v~--~~~~-~~~~~-i~~~~  256 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+ +++     +.. .++  |-.+ ..++. +.+..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSR----NREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            4689999999999999999988889999999884    55554332 222     212 222  2222 12222 23333


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...| +|++|++.|.
T Consensus        82 ~~~g-id~lv~~Ag~   95 (260)
T 2z1n_A           82 DLGG-ADILVYSTGG   95 (260)
T ss_dssp             HTTC-CSEEEECCCC
T ss_pred             HhcC-CCEEEECCCC
Confidence            3445 9999999983

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.23  E-value=0.0022  Score=54.60  Aligned_cols=80  Identities=18%  Similarity=0.159  Sum_probs=52.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE---eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF---TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~---~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++.....   |-.+ ..++. +.+.....|+
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLD----KSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe----CCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999998    456665544 455544322   2111 11221 1111122235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        80 iD~lvnnAg~   89 (281)
T 3zv4_A           80 IDTLIPNAGI   89 (281)
T ss_dssp             CCEEECCCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.23  E-value=0.00061  Score=56.67  Aligned_cols=79  Identities=15%  Similarity=0.022  Sum_probs=48.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHH---HHHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVK---NVKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~i~~~~~~~g~~D~  264 (288)
                      .+++++|+|++|++|.+.++.+.. |++|+++.    .++++.+.+.++.....+..+-.+..   .+.+.....+++|+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~----r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   78 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALG----RNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDT   78 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEE----SCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEe----CCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCE
Confidence            468999999999999998877765 99999888    56777766665432222222211111   11112223346999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +|++.|.
T Consensus        79 lv~~Ag~   85 (245)
T 3e9n_A           79 LVHAAAV   85 (245)
T ss_dssp             EEECC--
T ss_pred             EEECCCc
Confidence            9999985

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.23  E-value=0.00095  Score=56.12  Aligned_cols=81  Identities=17%  Similarity=0.237  Sum_probs=50.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHH----HHHHHhCCCCE-EEeCC--c-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA----KEKLKGLGADE-VFTES--Q-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~----~~~~~~~g~~~-v~~~~--~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.   ++++    .+.+++.+... .+.-+  + ..++. +.+....
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNG---AAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---SCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999988999999998543   2222    23334455432 22222  1 12222 1222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        84 ~g~id~lv~nAg~   96 (259)
T 3edm_A           84 FGEIHGLVHVAGG   96 (259)
T ss_dssp             HCSEEEEEECCCC
T ss_pred             hCCCCEEEECCCc
Confidence            2359999999874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.23  E-value=0.0017  Score=55.25  Aligned_cols=80  Identities=14%  Similarity=0.161  Sum_probs=52.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-E--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-F--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++.... +  |-.+ ..++. +.+.....|+
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVAD----VNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGR  101 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999989999999998    455555433 44554432 2  2111 12222 1112122235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus       102 iD~lv~nAg~  111 (277)
T 4dqx_A          102 VDVLVNNAGF  111 (277)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.23  E-value=0.0012  Score=55.44  Aligned_cols=80  Identities=13%  Similarity=0.106  Sum_probs=50.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHHH-HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKNV-KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~i-~~~~~~  258 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.    +++.+.... +  |-.+ ..++.+ .+....
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSR----KQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999899999999984    5544432    233443322 2  2111 112221 111111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        89 ~g~iD~lv~~Ag~  101 (260)
T 2zat_A           89 HGGVDILVSNAAV  101 (260)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2259999999884

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.22  E-value=0.0017  Score=53.94  Aligned_cols=81  Identities=11%  Similarity=0.114  Sum_probs=51.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCC--CEEEeCCc--cc---HHHH-HH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGA--DEVFTESQ--LE---VKNV-KG  254 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~--~~v~~~~~--~~---~~~i-~~  254 (288)
                      -.|++++|+|++|++|...++.+...|++|+++.+    ++++.+.    +++.+.  ..++..+-  .+   ++.+ .+
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGR----TEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEec----CHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence            35789999999999999999999999999999984    5555443    334442  22222211  22   2221 11


Q ss_pred             HhcCCCCccEEEECCCc
Q 023007          255 LLANLPEPALGFNCVGG  271 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~  271 (288)
                      .....|++|++|++.|.
T Consensus        88 ~~~~~g~id~lv~nAg~  104 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASI  104 (247)
T ss_dssp             HHHHHSCCSEEEECCCC
T ss_pred             HHHhCCCCCEEEECCcc
Confidence            11112259999999884

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.22  E-value=0.0012  Score=54.71  Aligned_cols=79  Identities=18%  Similarity=0.120  Sum_probs=50.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCE-EE--eCCc-ccHHHH-HHHhcCCCCc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-VF--TESQ-LEVKNV-KGLLANLPEP  262 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~-v~--~~~~-~~~~~i-~~~~~~~g~~  262 (288)
                      +++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++... .+  |-.+ ..++.+ .+.....|++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMG----RRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999988888999999998    456665544 3333221 11  2111 122221 1111112359


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|++.|.
T Consensus        79 d~lvnnAg~   87 (235)
T 3l6e_A           79 ELVLHCAGT   87 (235)
T ss_dssp             SEEEEECCC
T ss_pred             cEEEECCCC
Confidence            999999985

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.22  E-value=0.00024  Score=58.33  Aligned_cols=34  Identities=18%  Similarity=0.041  Sum_probs=30.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|+++++|.+.++.+...|++|+++.+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r   38 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASR   38 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESG
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecC
Confidence            4689999999999999999988888999998874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.22  E-value=0.0017  Score=54.42  Aligned_cols=80  Identities=13%  Similarity=0.103  Sum_probs=52.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-EeCC--c-ccHHHHHH-HhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTES--Q-LEVKNVKG-LLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~~~~--~-~~~~~i~~-~~~~~g~  261 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++.... +.-+  + ..++.+.+ .....|+
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTG----RNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGA   82 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999998    466665544 34443322 2211  1 12222111 1111235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        83 id~lv~nAg~   92 (255)
T 4eso_A           83 IDLLHINAGV   92 (255)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.21  E-value=0.0012  Score=55.04  Aligned_cols=80  Identities=18%  Similarity=0.254  Sum_probs=50.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCc-ccHHHHHH-HhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQ-LEVKNVKG-LLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~-~~~~~i~~-~~~~  258 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+    .++..+.... +  |-.+ ..++.+.+ ....
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDI----NADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcC----CHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999998889999999884    454443    2333443322 2  2111 11222111 1111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus        86 ~~~~d~vi~~Ag~   98 (255)
T 1fmc_A           86 LGKVDILVNNAGG   98 (255)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1249999999884

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.21  E-value=0.0017  Score=54.02  Aligned_cols=79  Identities=20%  Similarity=0.181  Sum_probs=50.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCE--EEeCCcccHHHHHH----HhcCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE--VFTESQLEVKNVKG----LLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~--v~~~~~~~~~~i~~----~~~~~g  260 (288)
                      .+++++|+|++|++|...++.+...|++|+++.    .++++.+.+ ++++...  .+..+-.+.+.+.+    ... .+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   84 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILID----REAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA-VA   84 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh-hC
Confidence            468999999999999999999988999999998    455554433 3444332  22211111122221    111 22


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        85 ~id~li~~Ag~   95 (254)
T 2wsb_A           85 PVSILVNSAGI   95 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCcc
Confidence            59999999884

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.21  E-value=0.002  Score=53.30  Aligned_cols=84  Identities=15%  Similarity=0.175  Sum_probs=48.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc-CCCCCHHHHHHHHhCCCCEE-EeCCcccHHHHHH----HhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR-DRAGSDEAKEKLKGLGADEV-FTESQLEVKNVKG----LLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~i~~----~~~~~g~  261 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+ .....++..+.+++.+.... +.-+-.+.+.+.+    .....++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999998843 21111112233344454322 2211111122211    1111124


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.20  E-value=0.0024  Score=53.42  Aligned_cols=80  Identities=18%  Similarity=0.233  Sum_probs=52.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-E--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-F--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++.... +  |-.+ ..++. +.+.....++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   83 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVD----RDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGK   83 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEc----CCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999989999999998    466665544 45554322 2  2111 12222 1112112225


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        84 id~li~~Ag~   93 (261)
T 3n74_A           84 VDILVNNAGI   93 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999884

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.20  E-value=0.0015  Score=56.85  Aligned_cols=85  Identities=12%  Similarity=0.152  Sum_probs=52.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC----------CCCCHHHHHHHHhCCCCEEEeCCc-cc---HHH-
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD----------RAGSDEAKEKLKGLGADEVFTESQ-LE---VKN-  251 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~----------~~~~~~~~~~~~~~g~~~v~~~~~-~~---~~~-  251 (288)
                      -.|+++||+|+++++|.+.++.+...|++|+++.+.          ....++..+.+++.+....+..-+ .+   ++. 
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            357899999999999999999888899999998743          111122233444555443322211 11   221 


Q ss_pred             HHHHhcCCCCccEEEECCCc
Q 023007          252 VKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~g~  271 (288)
                      +.+.....|++|++|+|.|.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            22222222359999999984

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.20  E-value=0.0032  Score=52.98  Aligned_cols=80  Identities=18%  Similarity=0.106  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC-----CCCEE-E--eCCc-ccHHH-HHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL-----GADEV-F--TESQ-LEVKN-VKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~-----g~~~v-~--~~~~-~~~~~-i~~~~  256 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+ +++     +.... +  |-.+ ..++. +.+..
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV----SSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            4689999999999999999988889999999984    55554332 221     43322 2  2222 12222 11111


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|++|++.|.
T Consensus        88 ~~~g~id~lv~nAg~  102 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGI  102 (267)
T ss_dssp             HHHSCCSEEEECCCC
T ss_pred             HHcCCCCEEEECCCc
Confidence            122359999999873

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.20  E-value=0.0022  Score=54.27  Aligned_cols=83  Identities=13%  Similarity=0.111  Sum_probs=52.0

Q ss_pred             CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEE--eCCc-ccHHHH-HHHhcCCC
Q 023007          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVF--TESQ-LEVKNV-KGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~--~~~~-~~~~~i-~~~~~~~g  260 (288)
                      .|++++|+|++  |++|.+.++.+...|++|+++.+... .++..+.+. +.+...++  |-.+ ..++.+ .+.....|
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999998  99999999999889999999986532 233444443 34422222  2222 122222 22222223


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|++.|.
T Consensus        84 ~id~lv~nAg~   94 (275)
T 2pd4_A           84 SLDFIVHSVAF   94 (275)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            59999999984

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.19  E-value=0.0013  Score=55.87  Aligned_cols=84  Identities=11%  Similarity=0.077  Sum_probs=51.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC--------CHHHH----HHHHhCCCCEEE---eCCc-ccHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG--------SDEAK----EKLKGLGADEVF---TESQ-LEVKN  251 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~--------~~~~~----~~~~~~g~~~v~---~~~~-~~~~~  251 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+....        +.++.    +.+++.+....+   |-.+ ..++.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999998853110        13333    233455654332   2222 12222


Q ss_pred             -HHHHhcCCCCccEEEECCCc
Q 023007          252 -VKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       252 -i~~~~~~~g~~D~v~d~~g~  271 (288)
                       +.+.....|++|++|++.|.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence             11111122359999999984

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.19  E-value=0.0014  Score=54.87  Aligned_cols=80  Identities=19%  Similarity=0.165  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-E--eCCc-ccHHHH-HHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-F--TESQ-LEVKNV-KGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~--~~~~-~~~~~i-~~~~~~~g~  261 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ ++++.... +  |-.+ ..++.+ .......|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSD----INEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999998888999999887    455555433 34443322 2  1111 112221 111111235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        81 id~lv~~Ag~   90 (253)
T 1hxh_A           81 LNVLVNNAGI   90 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.18  E-value=0.0016  Score=53.04  Aligned_cols=70  Identities=19%  Similarity=0.210  Sum_probs=49.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE-eCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|||+|++|.+|...++.+...|.+|+++.    .++++.+.+...+...+. |..+..  .  +...   ++|+||+|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~----R~~~~~~~~~~~~~~~~~~D~~d~~--~--~~~~---~~d~vi~~a   70 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVV----RDPQKAADRLGATVATLVKEPLVLT--E--ADLD---SVDAVVDAL   70 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHTCTTSEEEECCGGGCC--H--HHHT---TCSEEEECC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEE----ecccccccccCCCceEEeccccccc--H--hhcc---cCCEEEECC
Confidence            599999999999999999999999999999    467666655433443321 222222  2  2223   399999999


Q ss_pred             Cc
Q 023007          270 GG  271 (288)
Q Consensus       270 g~  271 (288)
                      |.
T Consensus        71 g~   72 (224)
T 3h2s_A           71 SV   72 (224)
T ss_dssp             CC
T ss_pred             cc
Confidence            86

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.18  E-value=0.0036  Score=52.81  Aligned_cols=80  Identities=20%  Similarity=0.220  Sum_probs=50.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-H----hCCCCEE-E--eCCc-ccHHHH-HHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-K----GLGADEV-F--TESQ-LEVKNV-KGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~----~~g~~~v-~--~~~~-~~~~~i-~~~~~  257 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+ +    ..+.... +  |-.+ ..++.+ .+...
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR----NLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999984    55544322 2    2254322 2  2222 122221 11111


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|++.|.
T Consensus        96 ~~g~iD~lvnnAg~  109 (267)
T 1vl8_A           96 KFGKLDTVVNAAGI  109 (267)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence            12259999999884

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.18  E-value=0.0013  Score=55.99  Aligned_cols=80  Identities=15%  Similarity=0.185  Sum_probs=50.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCC---C-EEE--eCCcc-cHHH-HHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGA---D-EVF--TESQL-EVKN-VKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~---~-~v~--~~~~~-~~~~-i~~~  255 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+    ++.+.   . .++  |-.+. .++. +.+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGR----SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            4689999999999999999988889999999984    55554432    23332   2 122  22221 1222 1111


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|++|++.|.
T Consensus        81 ~~~~g~iD~lv~nAg~   96 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGA   96 (280)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            1112359999999984

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.18  E-value=0.0032  Score=52.05  Aligned_cols=80  Identities=15%  Similarity=0.134  Sum_probs=50.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----h-CCCCE-EE--eCCc-ccHHH-HHHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----G-LGADE-VF--TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~-~g~~~-v~--~~~~-~~~~~-i~~~~~  257 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+.+.    + .+... ++  |-.+ ..++. +.+...
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGT----SGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999988889999999984    555544322    1 24332 22  2222 11222 222222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..+++|++|+|.|.
T Consensus        82 ~~~~~d~vi~~Ag~   95 (248)
T 2pnf_A           82 LVDGIDILVNNAGI   95 (248)
T ss_dssp             HSSCCSEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence            22359999999884

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.18  E-value=0.0016  Score=54.04  Aligned_cols=80  Identities=19%  Similarity=0.181  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCC--CC-EEE--eCCc-ccHHHH-HHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG--AD-EVF--TESQ-LEVKNV-KGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g--~~-~v~--~~~~-~~~~~i-~~~~~~~  259 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+    ++++.+.+ +++.  .. .++  |-.+ ..++.+ .......
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR----HSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999998889999999884    55554433 3332  11 222  2221 112221 1111111


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus        81 ~~id~li~~Ag~   92 (251)
T 1zk4_A           81 GPVSTLVNNAGI   92 (251)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            259999999884

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.17  E-value=0.0027  Score=53.97  Aligned_cols=80  Identities=15%  Similarity=0.165  Sum_probs=52.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EEE--eCCcc-cHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVF--TESQL-EVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v~--~~~~~-~~~~-i~~~~~~~g~  261 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++.. ..+  |-.+. .++. +.+.....|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCAD----IDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999998888999999998    455555433 455533 222  22221 2222 1112122235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus       104 iD~lvnnAg~  113 (277)
T 3gvc_A          104 VDKLVANAGV  113 (277)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.17  E-value=0.0015  Score=55.41  Aligned_cols=78  Identities=14%  Similarity=0.131  Sum_probs=52.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-EeCC--c-ccHHHHHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTES--Q-LEVKNVKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~~~~--~-~~~~~i~~~~~~~g~~  262 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++.... +.-+  + ..++.+.+.....+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~----r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i  104 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIAD----LAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRL  104 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe----CChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            568999999999999999998888999999998    456665543 45554322 2211  1 2233333333344459


Q ss_pred             cEEEECC
Q 023007          263 ALGFNCV  269 (288)
Q Consensus       263 D~v~d~~  269 (288)
                      |++|++.
T Consensus       105 d~lv~~a  111 (281)
T 3ppi_A          105 RYAVVAH  111 (281)
T ss_dssp             EEEEECC
T ss_pred             CeEEEcc
Confidence            9999983

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.17  E-value=0.0009  Score=56.52  Aligned_cols=80  Identities=15%  Similarity=0.087  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----Hh-CCCCEE-E--eCCc-ccHHH-HHHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGADEV-F--TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~g~~~v-~--~~~~-~~~~~-i~~~~~  257 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+.+    ++ .+.... +  |-.+ ..++. +.+...
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGR----DVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999984    55554432    22 343322 2  2222 12222 122222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|++.|.
T Consensus        95 ~~g~id~lv~nAg~  108 (266)
T 4egf_A           95 AFGGLDVLVNNAGI  108 (266)
T ss_dssp             HHTSCSEEEEECCC
T ss_pred             HcCCCCEEEECCCc
Confidence            22359999999884

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.17  E-value=0.0014  Score=55.68  Aligned_cols=85  Identities=12%  Similarity=0.067  Sum_probs=52.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC---------CCHHHHHH----HHhCCCCEEE---eCCc-ccH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA---------GSDEAKEK----LKGLGADEVF---TESQ-LEV  249 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~---------~~~~~~~~----~~~~g~~~v~---~~~~-~~~  249 (288)
                      -.|++++|+|+++++|.+.++.+...|++|+++.+...         .++++.+.    +++.+.....   |-.+ ..+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            45789999999999999999999999999999874210         13444433    3345544322   2222 122


Q ss_pred             HHH-HHHhcCCCCccEEEECCCc
Q 023007          250 KNV-KGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       250 ~~i-~~~~~~~g~~D~v~d~~g~  271 (288)
                      +.+ .+.....|++|++|++.|.
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            221 1111122359999999984

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.17  E-value=0.0027  Score=55.34  Aligned_cols=84  Identities=15%  Similarity=0.173  Sum_probs=51.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC-CCCHHHHHHH----HhCCCCE-EE--eCCc-ccHHH-HHHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR-AGSDEAKEKL----KGLGADE-VF--TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~-~~~~~~~~~~----~~~g~~~-v~--~~~~-~~~~~-i~~~~~  257 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+.. ..++++.+.+    +..+... .+  |-.+ ..++. +.+...
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            367999999999999999999999999999988642 2344444433    2334332 22  2111 12221 222222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|++.|.
T Consensus        84 ~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           84 EDGRIDVLIHNAGH   97 (324)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence            22359999999983

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.17  E-value=0.003  Score=52.66  Aligned_cols=75  Identities=16%  Similarity=0.166  Sum_probs=51.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE-eCCcccHHHHHHHhcCCCCccE
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      .-.|++++|+|++|++|.+.++.+...|++|+++.+    +++.   +++++...++ |- ...++.+.+...   ++|+
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r----~~~~---~~~~~~~~~~~D~-~~~~~~~~~~~~---~iD~   84 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR----NEEL---LKRSGHRYVVCDL-RKDLDLLFEKVK---EVDI   84 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHH---HHHTCSEEEECCT-TTCHHHHHHHSC---CCSE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC----CHHH---HHhhCCeEEEeeH-HHHHHHHHHHhc---CCCE
Confidence            346789999999999999999998889999999983    5533   3345522222 22 223444444333   3999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +|++.|.
T Consensus        85 lv~~Ag~   91 (249)
T 1o5i_A           85 LVLNAGG   91 (249)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.16  E-value=0.0027  Score=52.47  Aligned_cols=75  Identities=16%  Similarity=0.201  Sum_probs=51.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      .+++|+|+|++|.+|...++.+...  |++|+++.    .++++.+.+ .-+... +..+-.+.+.+.++..+   +|+|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~----r~~~~~~~~-~~~~~~-~~~D~~d~~~~~~~~~~---~d~v   73 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV----RSAQGKEKI-GGEADV-FIGDITDADSINPAFQG---IDAL   73 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE----SCHHHHHHT-TCCTTE-EECCTTSHHHHHHHHTT---CSEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE----cCCCchhhc-CCCeeE-EEecCCCHHHHHHHHcC---CCEE
Confidence            4678999999999999999988888  89999998    455554432 112222 22222223456555543   9999


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      |+|.|.
T Consensus        74 i~~a~~   79 (253)
T 1xq6_A           74 VILTSA   79 (253)
T ss_dssp             EECCCC
T ss_pred             EEeccc
Confidence            999874

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.16  E-value=0.0023  Score=56.35  Aligned_cols=84  Identities=13%  Similarity=0.191  Sum_probs=53.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-------HHHHHHHHhCCCCEEE---eCCcc-cHHHH-HHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-------DEAKEKLKGLGADEVF---TESQL-EVKNV-KGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-------~~~~~~~~~~g~~~v~---~~~~~-~~~~i-~~~  255 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.....       .+..+.+++.|....+   |-.+. .++.+ .+.
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999998888999999998654321       1233445556644322   22221 22221 112


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|++|+|.|.
T Consensus       124 ~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          124 IKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence            1222359999999984

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.16  E-value=0.0026  Score=53.44  Aligned_cols=80  Identities=15%  Similarity=0.111  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC-EEE--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD-EVF--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~-~v~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ +++... ..+  |-.+ ..++. +.+.....|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   81 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGD----ILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGG   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999998888999999988    455555433 344322 122  2222 11222 1111112225


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        82 iD~lv~~Ag~   91 (260)
T 1nff_A           82 LHVLVNNAGI   91 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.16  E-value=0.0022  Score=54.34  Aligned_cols=84  Identities=15%  Similarity=0.211  Sum_probs=51.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-------HHHHHHHHhCCCCEE-E--eCCc-ccHHH-HHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-------DEAKEKLKGLGADEV-F--TESQ-LEVKN-VKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-------~~~~~~~~~~g~~~v-~--~~~~-~~~~~-i~~~  255 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.....       ++..+.++..+.... +  |-.+ ..++. +.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            578999999999999999998888999999998654211       122233334444322 2  2111 12222 1222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|++|+|.|.
T Consensus        85 ~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            2222359999999984

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.16  E-value=0.0013  Score=55.56  Aligned_cols=82  Identities=15%  Similarity=0.151  Sum_probs=49.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEEE---eCCc-ccHHHH-HHHhc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVF---TESQ-LEVKNV-KGLLA  257 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v~---~~~~-~~~~~i-~~~~~  257 (288)
                      ..|++++|+|+++++|.+.++.+...|++|+++.+.   ++++.    +.++..+.....   |-.+ ..++.+ .+...
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAG---KAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESS---CSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            357899999999999999888888889999987542   33332    233455544322   2211 122221 11112


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|+|.|.
T Consensus       102 ~~g~iD~lvnnAG~  115 (267)
T 3u5t_A          102 AFGGVDVLVNNAGI  115 (267)
T ss_dssp             HHSCEEEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence            22359999999984

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.15  E-value=0.0011  Score=56.41  Aligned_cols=41  Identities=24%  Similarity=0.379  Sum_probs=34.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK  232 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~  232 (288)
                      +|++++|+|++|++|...++.+...|++|+++.+    ++++.+.
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r----~~~~~~~   67 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR----SKETLQK   67 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC----CHHHHHH
Confidence            4689999999999999999988889999999984    5555443

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.15  E-value=0.0015  Score=56.15  Aligned_cols=85  Identities=13%  Similarity=0.094  Sum_probs=52.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC--------CCHHHHH----HHHhCCCCEEE---eCCc-ccHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA--------GSDEAKE----KLKGLGADEVF---TESQ-LEVK  250 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~--------~~~~~~~----~~~~~g~~~v~---~~~~-~~~~  250 (288)
                      -.|++++|+|+++++|.+.++.+...|++|+++.+...        .++++.+    .++..+....+   |-.+ ..++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            35789999999999999999999899999999874311        1234333    33455654332   2121 1222


Q ss_pred             H-HHHHhcCCCCccEEEECCCc
Q 023007          251 N-VKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       251 ~-i~~~~~~~g~~D~v~d~~g~  271 (288)
                      . +.+.....|++|++|+|.|.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCC
Confidence            2 22221222359999999884

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.15  E-value=0.0015  Score=55.49  Aligned_cols=34  Identities=12%  Similarity=0.061  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~   42 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDI   42 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcc
Confidence            5789999999999999999999999999999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.14  E-value=0.0023  Score=53.68  Aligned_cols=83  Identities=19%  Similarity=0.213  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCC--c-ccHHHH-HHHhcCCC
Q 023007          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTES--Q-LEVKNV-KGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~--~-~~~~~i-~~~~~~~g  260 (288)
                      .+++++|+|++  |++|.+.++.+...|++|+++.+... .++..+.+. +.+...++.-+  + ..++.+ .+.....|
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999998  89999988888888999999885321 122333332 34432333222  2 122221 11111122


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|++.|.
T Consensus        86 ~iD~lv~~Ag~   96 (261)
T 2wyu_A           86 GLDYLVHAIAF   96 (261)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            59999999984

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.14  E-value=0.0013  Score=55.73  Aligned_cols=83  Identities=12%  Similarity=0.164  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE-EE--eCCc-ccHHH-HHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE-VF--TESQ-LEVKN-VKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~~g~~  262 (288)
                      .+++++|+|++|++|...+..+...|++|+++.+.....++..+.++..+... ++  |-.+ ..++. +.......+++
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999888888889999999865332222223333344332 22  2111 11222 11111112259


Q ss_pred             cEEEECCC
Q 023007          263 ALGFNCVG  270 (288)
Q Consensus       263 D~v~d~~g  270 (288)
                      |++|++.|
T Consensus       113 d~li~~Ag  120 (279)
T 3ctm_A          113 DVFVANAG  120 (279)
T ss_dssp             SEEEECGG
T ss_pred             CEEEECCc
Confidence            99999987

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.14  E-value=0.0021  Score=53.10  Aligned_cols=79  Identities=24%  Similarity=0.244  Sum_probs=50.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHhC-CCC-EEE--eCCc-ccH----HHHHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL-GAD-EVF--TESQ-LEV----KNVKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~-g~~-~v~--~~~~-~~~----~~i~~~~  256 (288)
                      ++++++|+|++|++|...++.+...|  ++|+++.+    ++++.+.++++ +.. .++  |-.+ ..+    +.+.+..
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR----DVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES----SGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec----CHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999998899  99999984    45555555555 222 222  2111 112    2222222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      +.. ++|++|+|.|.
T Consensus        78 g~~-~id~li~~Ag~   91 (250)
T 1yo6_A           78 GSD-GLSLLINNAGV   91 (250)
T ss_dssp             GGG-CCCEEEECCCC
T ss_pred             CCC-CCcEEEECCcc
Confidence            211 39999999874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.14  E-value=0.0014  Score=56.29  Aligned_cols=80  Identities=18%  Similarity=0.256  Sum_probs=50.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCC---C-EEE--eCCcc-cHHH-HHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGA---D-EVF--TESQL-EVKN-VKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~---~-~v~--~~~~~-~~~~-i~~~  255 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+    ++.+.   . .++  |-.+. .++. +.+.
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR----NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            4689999999999999999998889999999984    55554332    23343   2 122  22221 1222 1111


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|++|++.|.
T Consensus       101 ~~~~g~iD~lvnnAG~  116 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGA  116 (297)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCc
Confidence            1112259999999883

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.14  E-value=0.0022  Score=54.56  Aligned_cols=83  Identities=17%  Similarity=0.169  Sum_probs=50.7

Q ss_pred             CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEE--eCCc-ccHHH-HHHHhcCCC
Q 023007          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVF--TESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~--~~~~-~~~~~-i~~~~~~~g  260 (288)
                      .|++++|+|++  |++|.+.++.+...|++|+++.+... .++..+.+. +.+...++  |-.+ ..++. +.+.....|
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999998  89999999988889999999985421 122333333 34422222  2222 12222 222222233


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|++.|.
T Consensus        99 ~iD~lv~~Ag~  109 (285)
T 2p91_A           99 SLDIIVHSIAY  109 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            59999999984

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.14  E-value=0.00099  Score=55.20  Aligned_cols=77  Identities=18%  Similarity=0.165  Sum_probs=49.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCcccHHHH-HHHhcCCCCccEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQLEVKNV-KGLLANLPEPALGF  266 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~i-~~~~~~~g~~D~v~  266 (288)
                      +++++|+|++|++|.+.++.+...|++|+++.+    ++++  ..++++...+ .|-.+..++.+ .+.....+++|++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r----~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASR----NPEE--AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----SCHH--HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC----CHHH--HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999999999999999999999999985    3333  2233453222 22222223222 22211122599999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      ++.|.
T Consensus        76 ~~Ag~   80 (239)
T 2ekp_A           76 HAAAV   80 (239)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99884

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.14  E-value=0.00087  Score=57.14  Aligned_cols=81  Identities=15%  Similarity=0.158  Sum_probs=50.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhC-CCCEEE---eCCc-ccHHH-HHHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGL-GADEVF---TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~-g~~~v~---~~~~-~~~~~-i~~~~~  257 (288)
                      .++++||+|+++++|.+.++.+...|++|+++.+.   ++++.+.    +++. +....+   |-.+ ..++. +.+...
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFG---APDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCC---CHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---ChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999988742   3443332    2333 333222   1111 12222 222222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|++.|.
T Consensus       101 ~~g~iD~lv~nAg~  114 (281)
T 3v2h_A          101 RFGGADILVNNAGV  114 (281)
T ss_dssp             HTSSCSEEEECCCC
T ss_pred             HCCCCCEEEECCCC
Confidence            23359999999985

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.14  E-value=0.0028  Score=52.84  Aligned_cols=78  Identities=19%  Similarity=0.192  Sum_probs=50.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCE-EEeCCcccHHHHHHH----hcCCCCcc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-VFTESQLEVKNVKGL----LANLPEPA  263 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~i~~~----~~~~g~~D  263 (288)
                      ++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ ++++... .+.-+-.+.+.+.++    ....|++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATG----RRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4789999999999999999888999999988    456655443 3444322 222221222233332    22334699


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|+|.|.
T Consensus        77 ~lvnnAg~   84 (248)
T 3asu_A           77 ILVNNAGL   84 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999984

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.14  E-value=0.0018  Score=54.28  Aligned_cols=33  Identities=12%  Similarity=0.079  Sum_probs=30.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +++++|+|++|++|.+.++.+...|++|+++.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   34 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADL   34 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            578999999999999998888888999999884

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.14  E-value=0.0015  Score=55.62  Aligned_cols=82  Identities=18%  Similarity=0.183  Sum_probs=51.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEEE---eCCc-ccHHH-HHHHhc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVF---TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v~---~~~~-~~~~~-i~~~~~  257 (288)
                      -.+++++|+|+++++|.+.++.+...|++|+++.+.   ++++.+    .++..+....+   |-.+ ..++. +.+...
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIG---DAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---CHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999998742   344333    33444544322   2222 22222 222222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|++.|.
T Consensus       104 ~~g~iD~lvnnAg~  117 (280)
T 4da9_A          104 EFGRIDCLVNNAGI  117 (280)
T ss_dssp             HHSCCCEEEEECC-
T ss_pred             HcCCCCEEEECCCc
Confidence            22359999999985

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.13  E-value=0.0028  Score=53.76  Aligned_cols=80  Identities=20%  Similarity=0.182  Sum_probs=51.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEE-E--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEV-F--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+ ...+++.... +  |-.+ ..++. +.+.....|+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTAR----RTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGR   79 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES----SGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999985    444443 3345554322 2  2112 11222 1112122225


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        80 id~lv~~Ag~   89 (281)
T 3m1a_A           80 VDVLVNNAGR   89 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.13  E-value=0.0021  Score=54.83  Aligned_cols=84  Identities=12%  Similarity=0.154  Sum_probs=52.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-------HHHHHHHHhCCCCEEE---eCCc-ccHHH-HHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-------DEAKEKLKGLGADEVF---TESQ-LEVKN-VKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-------~~~~~~~~~~g~~~v~---~~~~-~~~~~-i~~~  255 (288)
                      .+++++|+|+++++|.+.++.+...|++|+++.+.....       ++..+.+++.+....+   |-.+ ..++. +.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            478999999999999999998888999999998653311       1223344444543222   2222 12222 1222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|++|+|.|.
T Consensus        88 ~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           88 VEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHSCCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence            2222359999999984

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.13  E-value=0.0015  Score=54.60  Aligned_cols=81  Identities=15%  Similarity=0.249  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+.   ++++.+    .+++.+... ++  |-.+ ..++. +.+....
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS---KEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999888889999998841   444433    233344332 22  2111 11221 2212111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        83 ~g~id~li~~Ag~   95 (261)
T 1gee_A           83 FGKLDVMINNAGL   95 (261)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2249999999883

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.13  E-value=0.0027  Score=53.29  Aligned_cols=83  Identities=16%  Similarity=0.200  Sum_probs=50.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcC---CeEEEEEcCCCCCHHHHHHHHhCCCC-EEE--eCCc-ccHH----HHHHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRG---IHSINIIRDRAGSDEAKEKLKGLGAD-EVF--TESQ-LEVK----NVKGL  255 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g---~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~--~~~~-~~~~----~i~~~  255 (288)
                      -++++++|+|++|++|...++.+...|   ++|+++.+.....+ ..+.+.+.+.. .++  |-.+ ..++    .+.+.
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH-HHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            456899999999999999999988889   89999986543222 22223222322 222  2222 2222    22222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      .+.. ++|++|+|.|.
T Consensus        98 ~g~~-~id~li~~Ag~  112 (267)
T 1sny_A           98 TKDQ-GLNVLFNNAGI  112 (267)
T ss_dssp             HGGG-CCSEEEECCCC
T ss_pred             cCCC-CccEEEECCCc
Confidence            2211 39999999984

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.13  E-value=0.0023  Score=54.16  Aligned_cols=81  Identities=14%  Similarity=0.214  Sum_probs=51.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-EeCC--c-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTES--Q-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~~~~--~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.   ++++.+    .+++.+.... +.-+  + ..++. +.+....
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN---AAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999888999999988642   333332    3345565433 2211  1 12222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus       107 ~g~iD~lvnnAg~  119 (271)
T 3v2g_A          107 LGGLDILVNSAGI  119 (271)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCcEEEECCCC
Confidence            2359999999884

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.13  E-value=0.0012  Score=55.78  Aligned_cols=80  Identities=16%  Similarity=0.139  Sum_probs=50.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----Hh-CCCC-E-EE--eCCc-ccHHHH-HHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-LGAD-E-VF--TESQ-LEVKNV-KGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~g~~-~-v~--~~~~-~~~~~i-~~~~  256 (288)
                      .+++++|+|+++++|.+.++.+...|++|+++.+    ++++.+.+    ++ .+.. . .+  |-.+ ..++.+ .+..
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCAR----DGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            4789999999999999999998899999999884    55554332    22 3332 2 22  2222 122221 1121


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|++|+|.|.
T Consensus        83 ~~~g~id~lvnnAg~   97 (265)
T 3lf2_A           83 RTLGCASILVNNAGQ   97 (265)
T ss_dssp             HHHCSCSEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            222359999999984

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.13  E-value=0.0026  Score=53.91  Aligned_cols=78  Identities=17%  Similarity=0.083  Sum_probs=50.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCC--C-EEEeCCcccHHHHHHHh----cCCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--D-EVFTESQLEVKNVKGLL----ANLPE  261 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~--~-~v~~~~~~~~~~i~~~~----~~~g~  261 (288)
                      ++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ +++..  . ..+.-+-.+.+.+.++.    ...|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTG----RREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999889999999998    456555443 23321  1 22222212222333322    22245


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        98 iD~lvnnAG~  107 (272)
T 2nwq_A           98 LRGLINNAGL  107 (272)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.13  E-value=0.0018  Score=54.91  Aligned_cols=34  Identities=18%  Similarity=0.118  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r   43 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDI   43 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence            5789999999999999999999999999999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.13  E-value=0.0039  Score=52.66  Aligned_cols=80  Identities=9%  Similarity=0.065  Sum_probs=50.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCE-EE--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADE-VF--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~-v~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.    +++.+ ..++++... .+  |-.+ ..++. +.+.....|+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLP----ETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGR   85 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECT----TSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCC----HHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999998854    33332 333445332 22  2222 12222 1111122235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        86 id~lv~nAg~   95 (271)
T 3tzq_B           86 LDIVDNNAAH   95 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.12  E-value=0.0013  Score=55.68  Aligned_cols=34  Identities=18%  Similarity=0.129  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   45 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDL   45 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec
Confidence            5789999999999999999999999999999874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.12  E-value=0.0035  Score=52.48  Aligned_cols=80  Identities=16%  Similarity=0.179  Sum_probs=50.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCCE-EE--eCCc-ccHHHH-HHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADE-VF--TESQ-LEVKNV-KGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~~-v~--~~~~-~~~~~i-~~~~~~~g~  261 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+.    +++. +..++++... ++  |-.+ ..++.+ .+.....++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLP----NSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGR   86 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECT----TSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC----cHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            46899999999999999999999999999999854    2222 2334444332 22  2121 112221 111111225


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        87 id~li~~Ag~   96 (265)
T 2o23_A           87 VDVAVNCAGI   96 (265)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999884

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.11  E-value=0.0036  Score=54.39  Aligned_cols=84  Identities=8%  Similarity=0.099  Sum_probs=53.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC-CC-CEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GA-DEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-g~-~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      .+.+|||+|++|.+|...++.+...|++|+++.+.....++..+.+... +. -.++..+-.+.+.+.++.... ++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAH-PITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHS-CCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhcc-CCcEE
Confidence            4679999999999999999999999999999986543333333333221 21 122222222234444443322 39999


Q ss_pred             EECCCcc
Q 023007          266 FNCVGGN  272 (288)
Q Consensus       266 ~d~~g~~  272 (288)
                      |+|.+..
T Consensus        83 ih~A~~~   89 (341)
T 3enk_A           83 IHFAALK   89 (341)
T ss_dssp             EECCCCC
T ss_pred             EECcccc
Confidence            9999853

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.11  E-value=0.00097  Score=55.12  Aligned_cols=95  Identities=17%  Similarity=0.159  Sum_probs=65.1

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKNVKGL  255 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~i~~~  255 (288)
                      ....++++++||-+|+ | .|..+..+++..+.+++++.    .+++..+.++    ..|...+  +..+.     ...+
T Consensus        85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~v~~~~~d~-----~~~~  153 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIE----RIPELVEFAKRNLERAGVKNVHVILGDG-----SKGF  153 (235)
T ss_dssp             HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEESCG-----GGCC
T ss_pred             HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEe----CCHHHHHHHHHHHHHcCCCCcEEEECCc-----ccCC
Confidence            3357889999999998 5 78889999998777888886    5777766664    3554322  21111     0111


Q ss_pred             hcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      ..+. ++|+|+.+..-... +.+.+.|+++|+++
T Consensus       154 ~~~~-~fD~Ii~~~~~~~~~~~~~~~L~pgG~lv  186 (235)
T 1jg1_A          154 PPKA-PYDVIIVTAGAPKIPEPLIEQLKIGGKLI  186 (235)
T ss_dssp             GGGC-CEEEEEECSBBSSCCHHHHHTEEEEEEEE
T ss_pred             CCCC-CccEEEECCcHHHHHHHHHHhcCCCcEEE
Confidence            1222 39999988776655 88899999999975

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.10  E-value=0.00039  Score=57.54  Aligned_cols=87  Identities=11%  Similarity=0.170  Sum_probs=55.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .++|||+|++|.+|...++.+...| ++|+++.+    ++++.+.+...+. .++..+-.+.+.+.+...+   +|+||+
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R----~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~---~D~vv~   94 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFAR----QPAKIHKPYPTNS-QIIMGDVLNHAALKQAMQG---QDIVYA   94 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES----SGGGSCSSCCTTE-EEEECCTTCHHHHHHHHTT---CSEEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc----ChhhhcccccCCc-EEEEecCCCHHHHHHHhcC---CCEEEE
Confidence            3689999999999999999999999 89999984    4443322111122 1222222233455555553   999999


Q ss_pred             CCCcccH----HHHHhhccC
Q 023007          268 CVGGNSA----SKVLKFLRF  283 (288)
Q Consensus       268 ~~g~~~~----~~a~~~l~~  283 (288)
                      |.|....    +..++.++.
T Consensus        95 ~a~~~~~~~~~~~~~~~~~~  114 (236)
T 3qvo_A           95 NLTGEDLDIQANSVIAAMKA  114 (236)
T ss_dssp             ECCSTTHHHHHHHHHHHHHH
T ss_pred             cCCCCchhHHHHHHHHHHHH
Confidence            9987543    344554433

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.10  E-value=0.0033  Score=52.56  Aligned_cols=41  Identities=15%  Similarity=0.075  Sum_probs=34.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK  232 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~  232 (288)
                      .+++++|+|++|++|...++.+...|++|+++.    .++++.+.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~----r~~~~~~~   46 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACD----LDRAAAQE   46 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe----CChHHHHH
Confidence            468999999999999999998888999999998    45555543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.10  E-value=0.0016  Score=54.85  Aligned_cols=81  Identities=25%  Similarity=0.262  Sum_probs=50.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCcc-cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQL-EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~~-~~~~-i~~~~~~  258 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+.   ++++.+    .+++.+.... +  |-.+. .++. +.+....
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~---~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS---SSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC---chHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999988899999998842   444433    3334454422 2  22221 1222 1111111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|+|.|.
T Consensus        97 ~~~~d~vi~~Ag~  109 (274)
T 1ja9_A           97 FGGLDFVMSNSGM  109 (274)
T ss_dssp             HSCEEEEECCCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2249999999874

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.09  E-value=0.0019  Score=55.03  Aligned_cols=34  Identities=18%  Similarity=0.140  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~   43 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDI   43 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEec
Confidence            5789999999999999999999999999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.08  E-value=0.0031  Score=54.00  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC----CCCE-EE--eCCc-ccHHH-HHHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GADE-VF--TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----g~~~-v~--~~~~-~~~~~-i~~~~~  257 (288)
                      .|++++|+|++|++|.+.++.+...|++|+++.+    ++++.+.+ +++    +... ++  |-.+ ..++. +.....
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR----KMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999889999999984    55554322 222    4332 22  2111 12222 111222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..+++|++|+|.|.
T Consensus       101 ~~g~id~li~~Ag~  114 (302)
T 1w6u_A          101 VAGHPNIVINNAAG  114 (302)
T ss_dssp             HTCSCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence            22359999999983

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.08  E-value=0.0011  Score=56.50  Aligned_cols=80  Identities=18%  Similarity=0.260  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|...++.+...|++|+++.    .++++.+.    +++.+.... +  |-.+ ..++. +.+....
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~----r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICIS----RTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEE----SSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEc----CCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            468999999999999999998888999999976    34544432    233454322 2  2221 12222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus       119 ~~~id~li~~Ag~  131 (285)
T 2c07_A          119 HKNVDILVNNAGI  131 (285)
T ss_dssp             CSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999884

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.08  E-value=0.0013  Score=55.39  Aligned_cols=80  Identities=15%  Similarity=0.130  Sum_probs=49.4

Q ss_pred             CCCeEEEeCCCC-hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC--EEEeC--Cc-ccHHH-HHHHh
Q 023007          188 SGDSIVQNGATS-IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD--EVFTE--SQ-LEVKN-VKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g-~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~--~v~~~--~~-~~~~~-i~~~~  256 (288)
                      .+++++|+|++| ++|...++.+...|++|+++.+    ++++.+.    +++.+..  .++.-  .+ ..++. +.+..
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDY----HERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecC----CHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            578999999986 8999999988888999999984    5554433    2333322  12221  11 12222 11111


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...+++|++|++.|.
T Consensus        97 ~~~g~id~li~~Ag~  111 (266)
T 3o38_A           97 EKAGRLDVLVNNAGL  111 (266)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCCcEEEECCCc
Confidence            112359999999984

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.08  E-value=0.00016  Score=61.28  Aligned_cols=35  Identities=14%  Similarity=0.229  Sum_probs=32.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.+.
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~   44 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARA   44 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECC
Confidence            68999999999999999999999999999999864

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.08  E-value=0.0024  Score=54.27  Aligned_cols=83  Identities=14%  Similarity=0.096  Sum_probs=52.5

Q ss_pred             CCCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcc---cHHH-HHHHhcCC
Q 023007          187 NSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQL---EVKN-VKGLLANL  259 (288)
Q Consensus       187 ~~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~---~~~~-i~~~~~~~  259 (288)
                      -++++++|+|++  +++|.+.++.+...|++|+++.+..  .++..+.+. +.+.-.++.-+-.   .++. +.+.....
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            357899999998  5699999988888999999998542  335555553 3333333322211   2222 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus       102 g~id~li~nAg~  113 (280)
T 3nrc_A          102 DGLDAIVHSIAF  113 (280)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            359999999984

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.08  E-value=0.0019  Score=53.79  Aligned_cols=81  Identities=22%  Similarity=0.252  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-EeCC--c-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-FTES--Q-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~~~~--~-~~~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+.   ++++.+    .+++.+.+.. +.-+  + ..++. +.+....
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAG---SKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999988742   334333    3344555433 2211  1 11222 1112122


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        80 ~g~id~lv~nAg~   92 (246)
T 3osu_A           80 FGSLDVLVNNAGI   92 (246)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999984

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.08  E-value=0.002  Score=58.01  Aligned_cols=88  Identities=11%  Similarity=0.134  Sum_probs=55.9

Q ss_pred             cCC-CCCCeEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHH------------HHHHHHhCCCCEE-EeCC--c
Q 023007          184 TTL-NSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDE------------AKEKLKGLGADEV-FTES--Q  246 (288)
Q Consensus       184 ~~~-~~g~~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~------------~~~~~~~~g~~~v-~~~~--~  246 (288)
                      .++ +.++++||+|+++++|.+.+..+.. .|++|+++.+.....++            ..+.+++.|.... +.-+  +
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd  134 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFS  134 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCC
Confidence            455 4678999999999999998777777 89999998765433222            1245566776543 2222  1


Q ss_pred             -ccHHH-HHHHhcCC-CCccEEEECCCc
Q 023007          247 -LEVKN-VKGLLANL-PEPALGFNCVGG  271 (288)
Q Consensus       247 -~~~~~-i~~~~~~~-g~~D~v~d~~g~  271 (288)
                       ..++. +....... |++|+++++.|.
T Consensus       135 ~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          135 DAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence             12222 22222223 469999999875

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.08  E-value=0.0029  Score=53.53  Aligned_cols=97  Identities=12%  Similarity=0.093  Sum_probs=63.5

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHhC-----C--CC--EEEeCCccc
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGL-----G--AD--EVFTESQLE  248 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~-----g--~~--~v~~~~~~~  248 (288)
                      +.....++++++||-.|+ | .|..+..+++..  +.+++++.    .+++..+.+++.     |  .+  .++..+...
T Consensus        91 i~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~  164 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYE----QRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD  164 (280)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEC----SCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred             HHHHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEe----CCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence            334467899999999998 5 788888899875  46777776    577777666532     4  22  222221111


Q ss_pred             HHHHHHHhcCCCCccEEEECCCcc--cHHHHHhhccCCCeeC
Q 023007          249 VKNVKGLLANLPEPALGFNCVGGN--SASKVLKFLRFREEQW  288 (288)
Q Consensus       249 ~~~i~~~~~~~g~~D~v~d~~g~~--~~~~a~~~l~~~G~~v  288 (288)
                         . .+..+  .+|+|+......  .+..+.+.|+++|+++
T Consensus       165 ---~-~~~~~--~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~  200 (280)
T 1i9g_A          165 ---S-ELPDG--SVDRAVLDMLAPWEVLDAVSRLLVAGGVLM  200 (280)
T ss_dssp             ---C-CCCTT--CEEEEEEESSCGGGGHHHHHHHEEEEEEEE
T ss_pred             ---c-CCCCC--ceeEEEECCcCHHHHHHHHHHhCCCCCEEE
Confidence               0 01112  499988776654  3488899999999874

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.08  E-value=0.0033  Score=52.71  Aligned_cols=34  Identities=24%  Similarity=0.170  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   36 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGF   36 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeC
Confidence            4689999999999999999999999999998874

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.07  E-value=0.0033  Score=53.86  Aligned_cols=40  Identities=18%  Similarity=0.258  Sum_probs=33.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE  231 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  231 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r----~~~~~~   56 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASR----KLERLK   56 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC----CHHHHH
Confidence            4689999999999999999988889999999984    555443

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.07  E-value=0.001  Score=55.64  Aligned_cols=74  Identities=12%  Similarity=0.202  Sum_probs=48.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe-CCcccHHH-HHHHhcCCCCccEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT-ESQLEVKN-VKGLLANLPEPALGF  266 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~-~~~~~~~~-i~~~~~~~g~~D~v~  266 (288)
                      +++++|+|++|++|.+.++.+...|++|+++.+...    +.+     .....++ .+...++. +.+.....+++|++|
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~----~~~-----~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN----PNA-----DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC----TTS-----SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc----ccc-----ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            689999999999999999999999999999986432    111     0011122 12222322 222333344699999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      +|.|.
T Consensus        93 ~~Ag~   97 (251)
T 3orf_A           93 CAAGG   97 (251)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99983

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.07  E-value=0.003  Score=56.42  Aligned_cols=88  Identities=11%  Similarity=0.121  Sum_probs=54.9

Q ss_pred             cCC-CCCCeEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHH------------HHHHHHhCCCCEE-EeCC---
Q 023007          184 TTL-NSGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDE------------AKEKLKGLGADEV-FTES---  245 (288)
Q Consensus       184 ~~~-~~g~~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~------------~~~~~~~~g~~~v-~~~~---  245 (288)
                      ..+ ..++++||+|+++++|.+.++.+.. .|++|+++.......++            ..+.+++.|.... +.-+   
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS  120 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC
Confidence            444 5678899999999999998877777 89999988754332221            1234556675533 2222   


Q ss_pred             cccHHH-HHHHhcCCCCccEEEECCCc
Q 023007          246 QLEVKN-VKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       246 ~~~~~~-i~~~~~~~g~~D~v~d~~g~  271 (288)
                      ...++. +.+.....|++|+++++.|.
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            112222 22222333469999999885

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.06  E-value=0.0025  Score=53.65  Aligned_cols=40  Identities=18%  Similarity=0.183  Sum_probs=33.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE  231 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  231 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+    ++++.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~   45 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW----NLEAGV   45 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEEC----CHHHHH
Confidence            5789999999999999999999999999999884    555443

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.06  E-value=0.0011  Score=63.05  Aligned_cols=84  Identities=15%  Similarity=0.182  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc---------CCCCCHHHHHHHHhCCCCEEEeCCcc-cHHHH-HHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR---------DRAGSDEAKEKLKGLGADEVFTESQL-EVKNV-KGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~---------~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~i-~~~~  256 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+         .....++..+.+++.+...+.|..+. ..+.+ .+..
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            5789999999999999999988889999998753         11112223344556666666655442 22222 2222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|++|+|.|.
T Consensus        98 ~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           98 KAFGRVDILVNNAGI  112 (613)
T ss_dssp             -------CEECCCCC
T ss_pred             HHCCCCcEEEECCCC
Confidence            333469999999984

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.06  E-value=0.0015  Score=55.16  Aligned_cols=80  Identities=15%  Similarity=0.209  Sum_probs=49.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-HHhCCC--C-EEEeCCcccHHHHHHH----hcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-LKGLGA--D-EVFTESQLEVKNVKGL----LANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~g~--~-~v~~~~~~~~~~i~~~----~~~~  259 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+    ++++.+. .++++.  . .++..+-.+.+.+.++    ....
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI----ADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC----ChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999988889999999873    4544433 233332  1 2222221111222111    1111


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|+|.|.
T Consensus        91 ~~id~li~~Ag~  102 (278)
T 2bgk_A           91 GKLDIMFGNVGV  102 (278)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            249999999884

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.06  E-value=0.0027  Score=53.11  Aligned_cols=84  Identities=20%  Similarity=0.234  Sum_probs=50.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCE-EE--eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-VF--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~-v~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      .+++++|+|++|++|...++.+...|++|+++.+......+..+.+ ++.+... .+  |-.+ ..++. +.......++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4679999999999999999988889999999986432222222222 2224332 22  2222 12222 2222222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999884

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.05  E-value=0.0016  Score=55.76  Aligned_cols=76  Identities=11%  Similarity=0.039  Sum_probs=51.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC----CCC-EEEeCCcccHHHHHHHhcCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----GAD-EVFTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----g~~-~v~~~~~~~~~~i~~~~~~~g  260 (288)
                      -+|++++|+|++|++|.+++..+...|++|+++.+    ++++.+.+ +++    +.. ...|..+  .+.+.+....  
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R----~~~~~~~l~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~--  188 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR----KLDKAQAAADSVNKRFKVNVTAAETAD--DASRAEAVKG--  188 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHHHTCCCEEEECCS--HHHHHHHTTT--
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEecCCC--HHHHHHHHHh--
Confidence            46789999998899999999999999999888773    55554433 222    222 1223222  2345444443  


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                       +|++|+|+|.
T Consensus       189 -~DvlVn~ag~  198 (287)
T 1lu9_A          189 -AHFVFTAGAI  198 (287)
T ss_dssp             -CSEEEECCCT
T ss_pred             -CCEEEECCCc
Confidence             8999999973

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.05  E-value=0.0041  Score=53.28  Aligned_cols=80  Identities=18%  Similarity=0.233  Sum_probs=53.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC-HHHHHHHH---hCCCCEEEeCCcccHHHHHHHhcCCCCccE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLK---GLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~---~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      ..+|+|+|++|.+|...++.+...|.+|+++++..... +++.+.++   ..+.. ++..+-.+.+.+.+...+   +|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~l~~~~~~---~d~   79 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDDHQRLVDALKQ---VDV   79 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSCHHHHHHHHTT---CSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCCCHHHHHHHHhC---CCE
Confidence            46799999999999999999988999999998653211 44444332   33443 332222233556665554   999


Q ss_pred             EEECCCcc
Q 023007          265 GFNCVGGN  272 (288)
Q Consensus       265 v~d~~g~~  272 (288)
                      ||++++..
T Consensus        80 vi~~a~~~   87 (313)
T 1qyd_A           80 VISALAGG   87 (313)
T ss_dssp             EEECCCCS
T ss_pred             EEECCccc
Confidence            99998853

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.05  E-value=0.005  Score=53.03  Aligned_cols=79  Identities=15%  Similarity=0.176  Sum_probs=54.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      ++|+|+|++|.+|...++.+...|.+|+++++......+..+.+...++..+ ..+-.+.+.+.+...+   +|+||++.
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v-~~Dl~d~~~l~~a~~~---~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIV-KGELDEHEKLVELMKK---VDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHTT---CSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEE-EecCCCHHHHHHHHcC---CCEEEECC
Confidence            5799999999999999999998999999999754222222333344565433 2222233456665554   99999999


Q ss_pred             Ccc
Q 023007          270 GGN  272 (288)
Q Consensus       270 g~~  272 (288)
                      +..
T Consensus        88 ~~~   90 (318)
T 2r6j_A           88 AFP   90 (318)
T ss_dssp             CGG
T ss_pred             chh
Confidence            853

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.04  E-value=0.0025  Score=57.38  Aligned_cols=95  Identities=14%  Similarity=0.066  Sum_probs=66.9

Q ss_pred             HHHHHhhc-CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHH
Q 023007          177 LRMLEDFT-TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGL  255 (288)
Q Consensus       177 ~~~l~~~~-~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~  255 (288)
                      +.++.+.. ..-.|++|+|.|. |.+|...++.++.+|++|+++.    .++.+...+...|....         .+.++
T Consensus       198 ldgi~ratg~~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D----~~p~~a~~A~~~G~~~~---------sL~ea  263 (436)
T 3h9u_A          198 VDGIKRATDVMIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTE----VDPINALQAAMEGYQVL---------LVEDV  263 (436)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCEEC---------CHHHH
T ss_pred             HHHHHHhcCCcccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEC----CChhhhHHHHHhCCeec---------CHHHH
Confidence            44443322 3457899999998 9999999999999999998876    46666656666775321         12233


Q ss_pred             hcCCCCccEEEECCCcccH--HHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                      ..   ..|+++.+.+....  ...++.|+++..++
T Consensus       264 l~---~ADVVilt~gt~~iI~~e~l~~MK~gAIVI  295 (436)
T 3h9u_A          264 VE---EAHIFVTTTGNDDIITSEHFPRMRDDAIVC  295 (436)
T ss_dssp             TT---TCSEEEECSSCSCSBCTTTGGGCCTTEEEE
T ss_pred             Hh---hCCEEEECCCCcCccCHHHHhhcCCCcEEE
Confidence            33   38999988887554  56788888887653

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.04  E-value=0.0017  Score=52.52  Aligned_cols=94  Identities=17%  Similarity=0.227  Sum_probs=64.1

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-E--EEeCCcccHHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-E--VFTESQLEVKNVKG  254 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~--v~~~~~~~~~~i~~  254 (288)
                      ....+.++++||-.|+ |. |..++.+++. +.+|+++.    .+++..+.++    ..|.. .  ++..+...  .+  
T Consensus        49 ~~l~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~v~~vD----~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~--~~--  117 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-GS-GSVSVEWCLA-GGRAITIE----PRADRIENIQKNIDTYGLSPRMRAVQGTAPA--AL--  117 (204)
T ss_dssp             HHHCCCTTCEEEEETC-TT-CHHHHHHHHT-TCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEESCTTG--GG--
T ss_pred             HhcCCCCCCEEEEecC-CC-CHHHHHHHHc-CCEEEEEe----CCHHHHHHHHHHHHHcCCCCCEEEEeCchhh--hc--
Confidence            4467889999999999 44 8888888888 88999987    5788777664    45554 2  22222111  01  


Q ss_pred             HhcCCCCccEEEECCCccc--HHHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNS--ASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~--~~~a~~~l~~~G~~v  288 (288)
                        ...+.+|+|+...+...  ++.+.+.|+|+|+++
T Consensus       118 --~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv  151 (204)
T 3njr_A          118 --ADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIV  151 (204)
T ss_dssp             --TTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEE
T ss_pred             --ccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEE
Confidence              11124999997655433  488889999999985

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.02  E-value=0.0014  Score=55.62  Aligned_cols=73  Identities=14%  Similarity=-0.087  Sum_probs=50.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|||+|++|.+|...++.+... |.+|+++++    ++++...+...+... +..+-.+.+.+.+...+   +|+||+|.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R----~~~~~~~~~~~~v~~-~~~D~~d~~~l~~~~~~---~d~vi~~a   73 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVR----NVEKVPDDWRGKVSV-RQLDYFNQESMVEAFKG---MDTVVFIP   73 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEES----SGGGSCGGGBTTBEE-EECCTTCHHHHHHHTTT---CSEEEECC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC----CHHHHHHhhhCCCEE-EEcCCCCHHHHHHHHhC---CCEEEEeC
Confidence            5999999999999998888877 999999995    444433333334332 22222233556665553   99999998


Q ss_pred             Cc
Q 023007          270 GG  271 (288)
Q Consensus       270 g~  271 (288)
                      +.
T Consensus        74 ~~   75 (289)
T 3e48_A           74 SI   75 (289)
T ss_dssp             CC
T ss_pred             CC
Confidence            85

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.02  E-value=0.00083  Score=54.74  Aligned_cols=72  Identities=14%  Similarity=0.052  Sum_probs=49.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|+|+|++|.+|...++.+...|++|+++.+    ++++.+.   +.--.++..+-.+ .+.+.+...+   +|+||+|.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R----~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~---~d~vi~~a   71 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR----KVEQVPQ---YNNVKAVHFDVDWTPEEMAKQLHG---MDAIINVS   71 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEES----SGGGSCC---CTTEEEEECCTTSCHHHHHTTTTT---CSEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEEC----Cccchhh---cCCceEEEecccCCHHHHHHHHcC---CCEEEECC
Confidence            6999999999999999999999999999995    4433221   1111233333233 4566665553   99999999


Q ss_pred             Ccc
Q 023007          270 GGN  272 (288)
Q Consensus       270 g~~  272 (288)
                      |..
T Consensus        72 g~~   74 (219)
T 3dqp_A           72 GSG   74 (219)
T ss_dssp             CCT
T ss_pred             cCC
Confidence            853

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.02  E-value=0.0014  Score=54.94  Aligned_cols=78  Identities=15%  Similarity=0.194  Sum_probs=48.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-E--eCCc-ccHHHHHHHhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-F--TESQ-LEVKNVKGLLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~--~~~~-~~~~~i~~~~~~~g~~D  263 (288)
                      .++++||+|+++++|.+.++.+...|++|+++.+.   .++   ..++++.... +  |-.+ ..++.+.+.....|++|
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GED---VVADLGDRARFAAADVTDEAAVASALDLAETMGTLR   81 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS---CHH---HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc---hHH---HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999998888889999999842   222   3334554322 2  2111 12222222111123599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|+|.|.
T Consensus        82 ~lv~nAg~   89 (257)
T 3tl3_A           82 IVVNCAGT   89 (257)
T ss_dssp             EEEECGGG
T ss_pred             EEEECCCC
Confidence            99999984

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.02  E-value=0.0027  Score=54.13  Aligned_cols=35  Identities=17%  Similarity=0.263  Sum_probs=31.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~   56 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHN   56 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            46899999999999999999888899999999853

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.02  E-value=0.0054  Score=53.14  Aligned_cols=85  Identities=19%  Similarity=0.139  Sum_probs=52.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC--------CCHHHHH----HHHhCCCCEEE---eCCc-ccHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA--------GSDEAKE----KLKGLGADEVF---TESQ-LEVK  250 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~--------~~~~~~~----~~~~~g~~~v~---~~~~-~~~~  250 (288)
                      -.|+++||+|+++++|.+.++.+...|++|+++.....        .++++.+    .+++.+....+   |-.+ ..++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            35789999999999999999999999999999864310        1233332    23445544332   2211 1222


Q ss_pred             H-HHHHhcCCCCccEEEECCCc
Q 023007          251 N-VKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       251 ~-i~~~~~~~g~~D~v~d~~g~  271 (288)
                      . +.+.....|++|++|++.|.
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            2 12221222359999999984

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.01  E-value=0.0029  Score=53.52  Aligned_cols=41  Identities=12%  Similarity=0.141  Sum_probs=34.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK  232 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~  232 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.    .++++.+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~----r~~~~~~~   45 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITG----RHAERLEE   45 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHH
Confidence            468999999999999999998888999999998    45555543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.00  E-value=0.0054  Score=50.32  Aligned_cols=78  Identities=18%  Similarity=0.190  Sum_probs=51.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCE-EEeCCcccHHHHHHHhcCC-CCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADE-VFTESQLEVKNVKGLLANL-PEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~i~~~~~~~-g~~D~v~  266 (288)
                      ++++|+|++|++|.+.++.+...|++|+++.    .++++.+.+ ++++... .+.-+-.+.+.+.++.... ..+|++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv   77 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTG----RSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVV   77 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEE----SCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEe----CCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEE
Confidence            4799999999999999999999999999998    466666554 4454321 1211222233444443331 1359999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      ++.|.
T Consensus        78 ~~Ag~   82 (230)
T 3guy_A           78 HSAGS   82 (230)
T ss_dssp             ECCCC
T ss_pred             EeCCc
Confidence            99984

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.00  E-value=0.0047  Score=52.16  Aligned_cols=34  Identities=18%  Similarity=0.268  Sum_probs=30.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r   43 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYR   43 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999999999988889999999984

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.99  E-value=0.002  Score=54.47  Aligned_cols=83  Identities=12%  Similarity=0.175  Sum_probs=51.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEE-E--eCCc-ccHHHH-HHHh
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEV-F--TESQ-LEVKNV-KGLL  256 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v-~--~~~~-~~~~~i-~~~~  256 (288)
                      ..++++++|+|++|++|.+.++.+...|++|+++..   .++++.+.    +++.+.... +  |-.+ ..++.+ .+..
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   99 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYA---ANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVD   99 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC---CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999988743   34444433    234444322 2  1111 122221 1111


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...+++|++|+|.|.
T Consensus       100 ~~~g~id~li~nAg~  114 (272)
T 4e3z_A          100 RQFGRLDGLVNNAGI  114 (272)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhCCCCCEEEECCCC
Confidence            112359999999884

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.99  E-value=0.0043  Score=54.36  Aligned_cols=80  Identities=10%  Similarity=0.205  Sum_probs=53.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHc-CC-eEEEEEcCCCCCHHHHHHHH-hCCCC--EEEeCCcccHHHHHHHhcCCC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHR-GI-HSINIIRDRAGSDEAKEKLK-GLGAD--EVFTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~-g~-~vi~~~~~~~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~i~~~~~~~g  260 (288)
                      .-.+++|||+|++|.+|...++.+... |. +|+++.    .++.+.+.+. .+...  .++..+-.+.+.+.+...+  
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~----r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~--   91 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYS----RDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEG--   91 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEE----SCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTT--
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEE----CChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhc--
Confidence            345789999999999999998888887 97 898888    4565554432 23211  2222222233456555543  


Q ss_pred             CccEEEECCCcc
Q 023007          261 EPALGFNCVGGN  272 (288)
Q Consensus       261 ~~D~v~d~~g~~  272 (288)
                       +|+||++++..
T Consensus        92 -~D~Vih~Aa~~  102 (344)
T 2gn4_A           92 -VDICIHAAALK  102 (344)
T ss_dssp             -CSEEEECCCCC
T ss_pred             -CCEEEECCCCC
Confidence             99999999854

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.99  E-value=0.0024  Score=54.69  Aligned_cols=82  Identities=11%  Similarity=0.063  Sum_probs=50.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEEEeCCc----ccHHHH-HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVFTESQ----LEVKNV-KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v~~~~~----~~~~~i-~~~~~~  258 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.+..  .++..    +.+++.+....+..-+    ..++.+ .+....
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPA--EEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGG--GHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc--chhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999998886421  12222    2334556543322211    112221 111121


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus       126 ~g~iD~lv~nAg~  138 (294)
T 3r3s_A          126 LGGLDILALVAGK  138 (294)
T ss_dssp             HTCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999884

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.98  E-value=0.0035  Score=52.51  Aligned_cols=80  Identities=11%  Similarity=0.138  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCCC-EEE--eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGAD-EVF--TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~~-~v~--~~~~-~~~~~-i~~~~~~  258 (288)
                      .+++++|+|+++++|.+.++.+...|++|+++.+.   +++..+.+++    .+.. .++  |-.+ ..++. +.+....
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS---DTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999888899999998753   4444443332    2222 122  2121 12222 2222122


Q ss_pred             CCCccEEEECCC
Q 023007          259 LPEPALGFNCVG  270 (288)
Q Consensus       259 ~g~~D~v~d~~g  270 (288)
                      .+++|++|+|.|
T Consensus        83 ~g~id~lv~~Ag   94 (264)
T 3i4f_A           83 FGKIDFLINNAG   94 (264)
T ss_dssp             HSCCCEEECCCC
T ss_pred             hCCCCEEEECCc
Confidence            235999999999

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.98  E-value=0.0032  Score=53.25  Aligned_cols=38  Identities=13%  Similarity=0.233  Sum_probs=33.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ....|++|||+|+++++|.+.++.+...|++|+++.+.
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~   47 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLD   47 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            34678999999999999999999888899999998853

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.98  E-value=0.0037  Score=53.43  Aligned_cols=80  Identities=14%  Similarity=0.209  Sum_probs=53.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC-C-CCH-HHHHHH---HhCCCCEEEeCCcccHHHHHHHhcCCCCc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR-A-GSD-EAKEKL---KGLGADEVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~-~-~~~-~~~~~~---~~~g~~~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      +++|+|+|++|.+|...++.+...|.+|+++++.. . ..+ ++.+.+   ...+...+ ..+-.+.+.+.+...+   +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d~~~l~~~~~~---~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL-EGDINDHETLVKAIKQ---V   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHTT---C
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEE-EeCCCCHHHHHHHHhC---C
Confidence            46799999999999999998888899999998642 0 011 443333   33455433 2222233456555554   9


Q ss_pred             cEEEECCCcc
Q 023007          263 ALGFNCVGGN  272 (288)
Q Consensus       263 D~v~d~~g~~  272 (288)
                      |+||+|.+..
T Consensus        78 d~vi~~a~~~   87 (307)
T 2gas_A           78 DIVICAAGRL   87 (307)
T ss_dssp             SEEEECSSSS
T ss_pred             CEEEECCccc
Confidence            9999999853

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.98  E-value=0.0057  Score=53.47  Aligned_cols=79  Identities=5%  Similarity=0.072  Sum_probs=52.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hC------CCCEEEeCCcccHHHHHHHhcCCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GL------GADEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~------g~~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      +.+|||+|++|.+|...++.+...|++|+++.+......++.+.+. .+      +. .++..+-.+.+.+.++..+   
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~---  102 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF-KFIQGDIRNLDDCNNACAG---  102 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTE-EEEECCTTSHHHHHHHHTT---
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCce-EEEECCCCCHHHHHHHhcC---
Confidence            4789999999999999999988889999999864332333443332 22      22 2222222233455555543   


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|+||+|++.
T Consensus       103 ~d~vih~A~~  112 (352)
T 1sb8_A          103 VDYVLHQAAL  112 (352)
T ss_dssp             CSEEEECCSC
T ss_pred             CCEEEECCcc
Confidence            9999999985

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.97  E-value=0.0074  Score=50.19  Aligned_cols=96  Identities=11%  Similarity=0.027  Sum_probs=64.9

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHh----CCCCE---EEeCCcccHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKG----LGADE---VFTESQLEVK  250 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~----~g~~~---v~~~~~~~~~  250 (288)
                      +.....++++++||-.|+ |. |..+..+++..  +.+++++.    .+++..+.+++    .|...   ++..+..   
T Consensus        85 i~~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D----~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~---  155 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGV-GS-GALTLFLANIVGPEGRVVSYE----IREDFAKLAWENIKWAGFDDRVTIKLKDIY---  155 (255)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTSEEEEEC----SCHHHHHHHHHHHHHHTCTTTEEEECSCGG---
T ss_pred             HHHhhCCCCCCEEEEecC-Cc-hHHHHHHHHHhCCCeEEEEEe----cCHHHHHHHHHHHHHcCCCCceEEEECchh---
Confidence            445577899999999998 43 88888899885  56777776    57777766643    35332   2221111   


Q ss_pred             HHHHHhcCCCCccEEEECCCcc--cHHHHHhhccCCCeeC
Q 023007          251 NVKGLLANLPEPALGFNCVGGN--SASKVLKFLRFREEQW  288 (288)
Q Consensus       251 ~i~~~~~~~g~~D~v~d~~g~~--~~~~a~~~l~~~G~~v  288 (288)
                         +..... .+|+|+......  .+..+.+.|+|+|+++
T Consensus       156 ---~~~~~~-~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~  191 (255)
T 3mb5_A          156 ---EGIEEE-NVDHVILDLPQPERVVEHAAKALKPGGFFV  191 (255)
T ss_dssp             ---GCCCCC-SEEEEEECSSCGGGGHHHHHHHEEEEEEEE
T ss_pred             ---hccCCC-CcCEEEECCCCHHHHHHHHHHHcCCCCEEE
Confidence               111222 499999877765  3499999999999874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.97  E-value=0.0015  Score=55.93  Aligned_cols=34  Identities=18%  Similarity=0.149  Sum_probs=31.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE-c
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII-R  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~-~  221 (288)
                      .+++++|+|+++++|.+.++.+...|++|+++. +
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r   42 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR   42 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCC
Confidence            468999999999999999999999999999987 5

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.96  E-value=0.0024  Score=55.85  Aligned_cols=97  Identities=10%  Similarity=0.074  Sum_probs=60.0

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHhC----C-----------CC--EEE
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGL----G-----------AD--EVF  242 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~----g-----------~~--~v~  242 (288)
                      ....+.+|++||-.|+ |. |..++.+++..|  .+++++.    .+++..+.+++.    +           .+  .++
T Consensus        99 ~~l~~~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~  172 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFE----VRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI  172 (336)
T ss_dssp             HHHTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEE----SSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred             HhcCCCCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEe----CCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence            3457899999999998 44 888888888876  6788876    577777666431    1           01  122


Q ss_pred             eCCcccHHHHHHHhcCCCCccEEEECCCccc--HHHHHhhccCCCeeC
Q 023007          243 TESQLEVKNVKGLLANLPEPALGFNCVGGNS--ASKVLKFLRFREEQW  288 (288)
Q Consensus       243 ~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~--~~~a~~~l~~~G~~v  288 (288)
                      ..+...  ....+..+  .+|+|+-....+.  +..+.++|+|+|+++
T Consensus       173 ~~d~~~--~~~~~~~~--~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv  216 (336)
T 2b25_A          173 HKDISG--ATEDIKSL--TFDAVALDMLNPHVTLPVFYPHLKHGGVCA  216 (336)
T ss_dssp             ESCTTC--CC---------EEEEEECSSSTTTTHHHHGGGEEEEEEEE
T ss_pred             ECChHH--cccccCCC--CeeEEEECCCCHHHHHHHHHHhcCCCcEEE
Confidence            221111  01112222  4999887655443  488999999999974

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.94  E-value=0.004  Score=52.79  Aligned_cols=79  Identities=19%  Similarity=0.187  Sum_probs=50.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-H----hCCCCEE-E--eCCc-ccHHH-HHHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-K----GLGADEV-F--TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~----~~g~~~v-~--~~~~-~~~~~-i~~~~~  257 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+    ++++.+.. +    ..+.... +  |-.+ ..++. +.+...
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASR----SLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEES----CHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999984    55443322 2    2243322 2  2222 12222 222212


Q ss_pred             CCCCccEEEECCC
Q 023007          258 NLPEPALGFNCVG  270 (288)
Q Consensus       258 ~~g~~D~v~d~~g  270 (288)
                      ..|++|++|+|.|
T Consensus       102 ~~g~id~lv~nAg  114 (277)
T 4fc7_A          102 EFGRIDILINCAA  114 (277)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence            2235999999998

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.94  E-value=0.0018  Score=50.57  Aligned_cols=96  Identities=15%  Similarity=0.148  Sum_probs=62.7

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHH----hCCCC-EE-EeCCcccHHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLK----GLGAD-EV-FTESQLEVKNVKG  254 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v-~~~~~~~~~~i~~  254 (288)
                      ....++++++||-.|+ | .|..+..+++.. +.+++++.    .+++..+.++    ..+.. .+ +..+..  +   .
T Consensus        19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~~~~~~d~~--~---~   87 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFE----ISEERRERILSNAINLGVSDRIAVQQGAP--R---A   87 (178)
T ss_dssp             HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEEC----SCHHHHHHHHHHHHTTTCTTSEEEECCTT--G---G
T ss_pred             HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEe----CCHHHHHHHHHHHHHhCCCCCEEEecchH--h---h
Confidence            3356889999999998 5 388888988887 56777765    5777777665    44544 22 221111  1   1


Q ss_pred             HhcCCCCccEEEECCCccc---HHHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNS---ASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~---~~~a~~~l~~~G~~v  288 (288)
                      +....+.+|+|+.+.....   ++.+.+.|+|+|+++
T Consensus        88 ~~~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~  124 (178)
T 3hm2_A           88 FDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLV  124 (178)
T ss_dssp             GGGCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEE
T ss_pred             hhccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEE
Confidence            1121025999997665443   489999999999974

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.94  E-value=0.0058  Score=55.10  Aligned_cols=88  Identities=17%  Similarity=0.104  Sum_probs=54.5

Q ss_pred             cCCCCCCeEEEeCCCChHHHH--HHHHHHHcCCeEEEEEcCCCCC------------HHHHHHHHhCCCCEE-EeCC--c
Q 023007          184 TTLNSGDSIVQNGATSIVGQC--IIQIARHRGIHSINIIRDRAGS------------DEAKEKLKGLGADEV-FTES--Q  246 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~--a~~la~~~g~~vi~~~~~~~~~------------~~~~~~~~~~g~~~v-~~~~--~  246 (288)
                      .....|++++|+|+++++|.+  .+......|++|+++.+.....            +...+.+++.|.... +.-+  +
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCC
Confidence            446789999999999999998  4444445599999988654322            222234456675433 2222  1


Q ss_pred             -ccHHH-HHHHhcCCCCccEEEECCCc
Q 023007          247 -LEVKN-VKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       247 -~~~~~-i~~~~~~~g~~D~v~d~~g~  271 (288)
                       ..++. +.......|++|++|++.|.
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence             12222 22233334569999999886

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.93  E-value=0.0016  Score=52.53  Aligned_cols=95  Identities=7%  Similarity=-0.016  Sum_probs=64.5

Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCE--EEeCCcccHHHHHH
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADE--VFTESQLEVKNVKG  254 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~i~~  254 (288)
                      .....++++++||-+|+ | .|..+..+++. +.+++++.    .+++..+.++    ..+...  ++..+...  ... 
T Consensus        70 ~~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD----~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~-  139 (210)
T 3lbf_A           70 TELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVE----RIKGLQWQARRRLKNLDLHNVSTRHGDGWQ--GWQ-  139 (210)
T ss_dssp             HHHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEESCGGG--CCG-
T ss_pred             HHhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEe----cCHHHHHHHHHHHHHcCCCceEEEECCccc--CCc-
Confidence            34467889999999999 4 58888888888 88998887    5777776664    345432  22221111  000 


Q ss_pred             HhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                       ..+  .+|+|+.+..-+.. +...+.|+|+|+++
T Consensus       140 -~~~--~~D~i~~~~~~~~~~~~~~~~L~pgG~lv  171 (210)
T 3lbf_A          140 -ARA--PFDAIIVTAAPPEIPTALMTQLDEGGILV  171 (210)
T ss_dssp             -GGC--CEEEEEESSBCSSCCTHHHHTEEEEEEEE
T ss_pred             -cCC--CccEEEEccchhhhhHHHHHhcccCcEEE
Confidence             112  49999987666555 78899999999975

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.93  E-value=0.0045  Score=53.34  Aligned_cols=80  Identities=10%  Similarity=0.137  Sum_probs=53.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC-CC-CHHHHHHH---HhCCCCEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR-AG-SDEAKEKL---KGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~-~~-~~~~~~~~---~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      ..+|+|+|++|.+|...++.+...|.+|+++++.. .. .+++.+.+   ...++..+ ..+-.+.+.+.+...+   +|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v-~~D~~d~~~l~~a~~~---~d   79 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTII-EGEMEEHEKMVSVLKQ---VD   79 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEE-ECCTTCHHHHHHHHTT---CS
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEE-EecCCCHHHHHHHHcC---CC
Confidence            46799999999999999999888999999998652 10 12333332   33454433 2222234556666554   99


Q ss_pred             EEEECCCcc
Q 023007          264 LGFNCVGGN  272 (288)
Q Consensus       264 ~v~d~~g~~  272 (288)
                      +||+|.+..
T Consensus        80 ~vi~~a~~~   88 (321)
T 3c1o_A           80 IVISALPFP   88 (321)
T ss_dssp             EEEECCCGG
T ss_pred             EEEECCCcc
Confidence            999999853

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.93  E-value=0.0058  Score=50.60  Aligned_cols=40  Identities=25%  Similarity=0.160  Sum_probs=33.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK  232 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~  232 (288)
                      +++++|+|++|++|...+..+...|++|+++.+    ++++.+.
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r----~~~~~~~   41 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDL----SAETLEE   41 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC----CHHHHHH
Confidence            578999999999999999988889999999984    5555443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.92  E-value=0.002  Score=55.86  Aligned_cols=79  Identities=16%  Similarity=0.164  Sum_probs=50.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-----CCCC-EEE-eCCcccHHHHHHHhcC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-----LGAD-EVF-TESQLEVKNVKGLLAN  258 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-----~g~~-~v~-~~~~~~~~~i~~~~~~  258 (288)
                      ..++.+|||+|++|.+|...++.+...|++|+++.+    +.++.+.+.+     .+.. .++ ..+-.+.+.+.++.. 
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR----SASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC----CcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-
Confidence            345789999999999999999988888999999984    4554443321     1211 122 111111122333322 


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                        ++|+||+|.+.
T Consensus        83 --~~d~vih~A~~   93 (342)
T 1y1p_A           83 --GAAGVAHIASV   93 (342)
T ss_dssp             --TCSEEEECCCC
T ss_pred             --CCCEEEEeCCC
Confidence              39999999874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.92  E-value=0.0037  Score=53.38  Aligned_cols=80  Identities=18%  Similarity=0.131  Sum_probs=50.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCC---eEEEEEcCCCCCHHHHHHHH-hC-----CCCE-EE--eCC-cccHHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGI---HSINIIRDRAGSDEAKEKLK-GL-----GADE-VF--TES-QLEVKNVKG  254 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~---~vi~~~~~~~~~~~~~~~~~-~~-----g~~~-v~--~~~-~~~~~~i~~  254 (288)
                      .|++++|+|+++++|.+.++.+...|+   +|+++.    .++++.+.+. ++     +... ++  |-. ...++.+.+
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~----r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAA----RRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEE----SCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEE----CCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            468999999999999998877777777   888887    4565554432 21     3222 12  222 223333333


Q ss_pred             -HhcCCCCccEEEECCCc
Q 023007          255 -LLANLPEPALGFNCVGG  271 (288)
Q Consensus       255 -~~~~~g~~D~v~d~~g~  271 (288)
                       .....|++|++|++.|.
T Consensus       108 ~~~~~~g~iD~lVnnAG~  125 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGK  125 (287)
T ss_dssp             TSCGGGCSCCEEEECCCC
T ss_pred             HHHHhcCCCCEEEECCCc
Confidence             22233469999999984

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.91  E-value=0.0057  Score=52.27  Aligned_cols=80  Identities=20%  Similarity=0.256  Sum_probs=53.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC--HHHHHHHH---hCCCCEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS--DEAKEKLK---GLGADEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~--~~~~~~~~---~~g~~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      .++|+|+|++|.+|...++.+...|.+|+++++.....  +++.+.++   ..+... +..+-.+.+.+.+...+   +|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~~d~~~l~~~~~~---~d   79 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI-VHGSIDDHASLVEAVKN---VD   79 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEE-ECCCTTCHHHHHHHHHT---CS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEE-EEeccCCHHHHHHHHcC---CC
Confidence            46799999999999999999998999999998653221  44443332   345433 22222233455555554   99


Q ss_pred             EEEECCCcc
Q 023007          264 LGFNCVGGN  272 (288)
Q Consensus       264 ~v~d~~g~~  272 (288)
                      +||+|++..
T Consensus        80 ~vi~~a~~~   88 (308)
T 1qyc_A           80 VVISTVGSL   88 (308)
T ss_dssp             EEEECCCGG
T ss_pred             EEEECCcch
Confidence            999999864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.90  E-value=0.0045  Score=51.81  Aligned_cols=35  Identities=17%  Similarity=0.191  Sum_probs=31.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+.
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   54 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRS   54 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999998999999999854

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.90  E-value=0.003  Score=52.16  Aligned_cols=80  Identities=14%  Similarity=0.049  Sum_probs=48.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCC-EE-E--eCCcc-cHHHH-HHHhcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGAD-EV-F--TESQL-EVKNV-KGLLAN  258 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~-~v-~--~~~~~-~~~~i-~~~~~~  258 (288)
                      +++++|+|++|++|...++.+...|++|+++.+   .++++.+.    ++..+.. .. +  |-.+. .++.+ .+....
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~---r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYG---QNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEV   77 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES---SCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHh
Confidence            468999999999999999999889999998832   34444432    2333433 22 2  22221 12221 111111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        78 ~~~~d~li~~Ag~   90 (245)
T 2ph3_A           78 LGGLDTLVNNAGI   90 (245)
T ss_dssp             HTCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1249999999884

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.90  E-value=0.0015  Score=54.06  Aligned_cols=80  Identities=20%  Similarity=0.244  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCE-EE--eCCc-ccHHH-HHHHhcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADE-VF--TESQ-LEVKN-VKGLLANL  259 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~--~~~~-~~~~~-i~~~~~~~  259 (288)
                      |++++|+|++|++|...++.+...|++|+++.+   .++++.+.+    ++.+... .+  |-.+ ..++. +.+.....
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~---r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYA---RSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999998632   344444322    2334322 12  2121 12222 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|++.|.
T Consensus        78 g~id~li~~Ag~   89 (244)
T 1edo_A           78 GTIDVVVNNAGI   89 (244)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            359999999884

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.90  E-value=0.0031  Score=55.23  Aligned_cols=82  Identities=10%  Similarity=0.079  Sum_probs=49.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      +.+|||+|++|.+|...++.+...|++|+++.+.....++..+.+..-.--.++..+-.+.+.+.++..+. ++|+||+|
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih~   87 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-QPEIVFHM   87 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-CCCEEEEC
Confidence            57899999999999999999888999999998653222211111110111122322222223444433322 28999999


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      .+.
T Consensus        88 A~~   90 (357)
T 1rkx_A           88 AAQ   90 (357)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            984

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.89  E-value=0.0052  Score=51.20  Aligned_cols=82  Identities=16%  Similarity=0.131  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHh-C-CCC-EEE--eCCcc--cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKG-L-GAD-EVF--TESQL--EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~-~-g~~-~v~--~~~~~--~~~~-i~~~~~~  258 (288)
                      .+++++|+|++|++|...++.+...|++ |+++.+..  .++..+.+.+ . +.. .++  |-.+.  .++. +.+....
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE--NPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC--CHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCc--hHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            4689999999999999999999999997 77777542  2234444433 2 222 112  22221  2222 1211111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        82 ~g~id~lv~~Ag~   94 (254)
T 1sby_A           82 LKTVDILINGAGI   94 (254)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence            2259999999984

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.89  E-value=0.002  Score=56.27  Aligned_cols=34  Identities=18%  Similarity=0.149  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE-c
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII-R  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~-~  221 (288)
                      .++++||+|+++++|.+.++.+...|++|+++. +
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r   79 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR   79 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence            468999999999999999999999999999987 5

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.89  E-value=0.003  Score=50.42  Aligned_cols=74  Identities=19%  Similarity=0.160  Sum_probs=49.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      .+|+|+|++|.+|...++.+...|.+|+++.+    ++++.+.....+. .++..+-.+.+.+.+...+   +|+||+|.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r----~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~---~d~vi~~a   75 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR----DSSRLPSEGPRPA-HVVVGDVLQAADVDKTVAG---QDAVIVLL   75 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CGGGSCSSSCCCS-EEEESCTTSHHHHHHHHTT---CSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe----ChhhcccccCCce-EEEEecCCCHHHHHHHHcC---CCEEEECc
Confidence            68999999999999999999989999999985    4433221111122 2232222233455555543   99999999


Q ss_pred             Cc
Q 023007          270 GG  271 (288)
Q Consensus       270 g~  271 (288)
                      |.
T Consensus        76 ~~   77 (206)
T 1hdo_A           76 GT   77 (206)
T ss_dssp             CC
T ss_pred             cC
Confidence            85

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.87  E-value=0.0036  Score=51.83  Aligned_cols=36  Identities=17%  Similarity=0.168  Sum_probs=31.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ..+++++|+|++|++|.+.++.+...|++|+++.+.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV   40 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            457899999999999999999999999999999864

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.87  E-value=0.0075  Score=50.69  Aligned_cols=81  Identities=11%  Similarity=0.089  Sum_probs=49.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCE-EEeCC--c-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADE-VFTES--Q-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~-v~~~~--~-~~~~~-i~~~~~~  258 (288)
                      .+++++|+|+++++|...++.+...|++|++..+   .++++.+    .+++.+... ++..+  + ..++. +.+....
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~---r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYH---RDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---CchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999977664   2343332    233444332 22222  1 11222 1111112


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus       102 ~g~id~li~nAg~  114 (267)
T 4iiu_A          102 HGAWYGVVSNAGI  114 (267)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             hCCccEEEECCCC
Confidence            2359999999884

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.87  E-value=0.0028  Score=53.35  Aligned_cols=83  Identities=17%  Similarity=0.172  Sum_probs=50.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEEE---eCCc-ccHHHHH-HHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEVF---TESQ-LEVKNVK-GLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v~---~~~~-~~~~~i~-~~~~~  258 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.. .+.++.+.    +++.+....+   |-.+ ..++.+. +....
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQA-KDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCG-GGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCc-cCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999986421 13333332    2334443222   2111 1222211 11112


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|+|.|.
T Consensus        89 ~g~iD~lvnnAg~  101 (262)
T 3ksu_A           89 FGKVDIAINTVGK  101 (262)
T ss_dssp             HCSEEEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2359999999983

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.86  E-value=0.0015  Score=53.01  Aligned_cols=95  Identities=18%  Similarity=0.177  Sum_probs=64.9

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHh----CCCCE--EEeCCcccHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKG----LGADE--VFTESQLEVKNVK  253 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~i~  253 (288)
                      ....+.++++||.+|+ | .|..+..+++..|  .+++++.    .+++..+.+++    .+...  +...+..  .   
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~v~~~~~d~~--~---  139 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIE----RIPELAEKAERTLRKLGYDNVIVIVGDGT--L---  139 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEE----SCHHHHHHHHHHHHHHTCTTEEEEESCGG--G---
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEe----CCHHHHHHHHHHHHHcCCCCeEEEECCcc--c---
Confidence            4457889999999999 5 5888889999876  7888887    57777766643    34332  2221111  0   


Q ss_pred             HHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      .+... +.+|+|+.+..-... +.+.++|+++|+++
T Consensus       140 ~~~~~-~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv  174 (215)
T 2yxe_A          140 GYEPL-APYDRIYTTAAGPKIPEPLIRQLKDGGKLL  174 (215)
T ss_dssp             CCGGG-CCEEEEEESSBBSSCCHHHHHTEEEEEEEE
T ss_pred             CCCCC-CCeeEEEECCchHHHHHHHHHHcCCCcEEE
Confidence            01111 149999988776665 88899999999974

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.86  E-value=0.0026  Score=55.50  Aligned_cols=84  Identities=10%  Similarity=0.014  Sum_probs=49.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC------CCC-EEEeCCcccHHHHHHHhcC--
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL------GAD-EVFTESQLEVKNVKGLLAN--  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~------g~~-~v~~~~~~~~~~i~~~~~~--  258 (288)
                      ++++++|+|++|++|.+.+..+...|++|+.+.+.....++..+.++.+      +.. .++.-+-.+.+.+.++...  
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            3678999999999999999999999999887764322222222222222      222 2222221222233322211  


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        81 ~g~iD~lVnnAG~   93 (327)
T 1jtv_A           81 EGRVDVLVCNAGL   93 (327)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2359999999974

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.86  E-value=0.0027  Score=53.61  Aligned_cols=82  Identities=12%  Similarity=0.176  Sum_probs=49.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCC-EEE--eCCc-ccHHH-HHHHhc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD-EVF--TESQ-LEVKN-VKGLLA  257 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~-~v~--~~~~-~~~~~-i~~~~~  257 (288)
                      ..+++++|+|+++++|.+.++.+...|++|+++.+.   +.+..+    .++..+.. .++  |-.+ ..++. +.+...
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSE---RNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECS---CHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---chHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            457899999999999999999998999999988742   333332    22333432 222  2222 11222 111111


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|++.|.
T Consensus       100 ~~g~id~li~nAg~  113 (269)
T 3gk3_A          100 DFGKVDVLINNAGI  113 (269)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence            12359999999984

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.86  E-value=0.0024  Score=52.67  Aligned_cols=35  Identities=20%  Similarity=0.406  Sum_probs=31.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+.
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~   36 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS   36 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            35789999999999999999999999999999864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.86  E-value=0.0012  Score=53.97  Aligned_cols=74  Identities=18%  Similarity=0.198  Sum_probs=49.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      .+|||+|++|.+|...++.+...|.+|+++.+    ++++.+.+.  ..-.++..+-.+.+.+.+...+   +|+||+|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r----~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~---~d~vi~~a   75 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVR----HPEKIKIEN--EHLKVKKADVSSLDEVCEVCKG---ADAVISAF   75 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECS----CGGGCCCCC--TTEEEECCCTTCHHHHHHHHTT---CSEEEECC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEc----Ccccchhcc--CceEEEEecCCCHHHHHHHhcC---CCEEEEeC
Confidence            68999999999999999999999999999985    443322110  1112222222234556665553   99999999


Q ss_pred             Ccc
Q 023007          270 GGN  272 (288)
Q Consensus       270 g~~  272 (288)
                      |..
T Consensus        76 ~~~   78 (227)
T 3dhn_A           76 NPG   78 (227)
T ss_dssp             CC-
T ss_pred             cCC
Confidence            864

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=96.85  E-value=0.0056  Score=53.17  Aligned_cols=81  Identities=20%  Similarity=0.276  Sum_probs=50.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      .+|||+|++|.+|...++.+...|++|+++.+... ..++..+.++..+--.++..+-.+.+.+.++..+. ++|+||+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih~   80 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-MPDSCFHL   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-CCCEEEEC
Confidence            47999999999999999988889999999875321 11222333443332223322222223343333222 39999999


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      .+.
T Consensus        81 A~~   83 (347)
T 1orr_A           81 AGQ   83 (347)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            985

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.84  E-value=0.004  Score=51.90  Aligned_cols=76  Identities=16%  Similarity=0.100  Sum_probs=48.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHH-HHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKN-VKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~-i~~~~~~~g~~D~  264 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+..    +.    ++.+...+ .|-.+ ..++. +.+.....|++|+
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~----~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAF----TQ----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCC----CS----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCch----hh----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999999999998542    11    12332211 12222 12222 2222222335999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +|+|.|.
T Consensus        78 lv~~Ag~   84 (250)
T 2fwm_X           78 LVNAAGI   84 (250)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999984

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.84  E-value=0.0023  Score=53.78  Aligned_cols=84  Identities=18%  Similarity=0.188  Sum_probs=51.0

Q ss_pred             CCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCC-HHHHHHHH-hCCCCEEEeC---Cc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGS-DEAKEKLK-GLGADEVFTE---SQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~-~~~~~~~~-~~g~~~v~~~---~~-~~~~~-i~~~~~~  258 (288)
                      .|++++|+|++  +++|...++.+...|++|+++.+..... ++..+.+. ..+....+..   .+ ..++. +.+....
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            56899999998  8999999888888999999987543211 23333332 3344322211   11 11222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .+++|++|++.|.
T Consensus        99 ~g~id~li~nAg~  111 (267)
T 3gdg_A           99 FGQIDAFIANAGA  111 (267)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            3359999999984

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.83  E-value=0.0022  Score=55.62  Aligned_cols=84  Identities=15%  Similarity=0.234  Sum_probs=49.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC--CC-EEEeCCcccHHHHHHHhcCCCC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG--AD-EVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g--~~-~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      ..+++.+|||+|++|.+|...++.+...|++|+++.+.....  ..+.++.+.  .. .++..+-.+.+.+.++..+. +
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~   86 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSD--TRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-Q   86 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSC--CCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-C
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccc--cccchhhccccCceEEEECCCCCHHHHHHHHHHc-C
Confidence            467889999999999999999998888999999998653211  111222231  11 12222222233444443332 2


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|+||+|.+.
T Consensus        87 ~d~Vih~A~~   96 (335)
T 1rpn_A           87 PQEVYNLAAQ   96 (335)
T ss_dssp             CSEEEECCSC
T ss_pred             CCEEEECccc
Confidence            8999999885

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.82  E-value=0.0072  Score=49.85  Aligned_cols=79  Identities=15%  Similarity=0.101  Sum_probs=48.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCC-------eEEEEEcCCCCCHHHHHHH----HhCCCCE-EE--eCCc-ccHHH-H
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGI-------HSINIIRDRAGSDEAKEKL----KGLGADE-VF--TESQ-LEVKN-V  252 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~-------~vi~~~~~~~~~~~~~~~~----~~~g~~~-v~--~~~~-~~~~~-i  252 (288)
                      +++++|+|++|++|...++.+...|+       +|+++.    .++++.+.+    +..+... ++  |-.+ ..++. +
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSS----RTAADLEKISLECRAEGALTDTITADISDMADVRRLT   77 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEE----SCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEe----CCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHH
Confidence            57899999999999998888888899       888888    355554433    2224321 22  2111 11222 2


Q ss_pred             HHHhcCCCCccEEEECCCc
Q 023007          253 KGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~  271 (288)
                      .+.....+++|++|+|.|.
T Consensus        78 ~~~~~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           78 THIVERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHHHHHTSCCSEEEECCCC
T ss_pred             HHHHHhCCCCCEEEEcCCc
Confidence            2222222359999999884

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.82  E-value=0.0074  Score=52.48  Aligned_cols=82  Identities=12%  Similarity=0.128  Sum_probs=51.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC------CHHHHHHHHh-CCC-CEEEeCCcccHHHHHHHhcCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG------SDEAKEKLKG-LGA-DEVFTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~------~~~~~~~~~~-~g~-~~v~~~~~~~~~~i~~~~~~~g  260 (288)
                      +++|||+|++|.+|...++.+...|++|+++.+....      .++..+.+++ .+. -.++..+-.+.+.+.++....+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            4689999999999999998888889999998754221      2333443332 121 1222222222334444433223


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                       +|+||+|.+.
T Consensus        82 -~d~vih~A~~   91 (348)
T 1ek6_A           82 -FMAVIHFAGL   91 (348)
T ss_dssp             -EEEEEECCSC
T ss_pred             -CCEEEECCCC
Confidence             9999999985

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.80  E-value=0.0041  Score=53.97  Aligned_cols=80  Identities=19%  Similarity=0.284  Sum_probs=49.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC--C-EEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA--D-EVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~--~-~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      +++|||+|++|.+|...++.+...|++|+++.+.....+  .+.++.++.  . .++..+-.+.+.+.++..+. ++|+|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~v   79 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFA--SWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-QPDEV   79 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTT--THHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-CCSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccc--cccHhhccccCceeEEECCCCCHHHHHHHHHhc-CCCEE
Confidence            578999999999999999988888999999986432111  123334421  1 12211112223444433322 28999


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      |+|.|.
T Consensus        80 ih~A~~   85 (345)
T 2z1m_A           80 YNLAAQ   85 (345)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999985

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.80  E-value=0.01  Score=50.54  Aligned_cols=77  Identities=18%  Similarity=0.157  Sum_probs=52.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .++|+|+|++|.+|...++.+...| .+|+++++...  ....+.+...+...+ ..+-.+.+.+.+...+   +|+||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~--~~~~~~l~~~~~~~~-~~D~~d~~~l~~~~~~---~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR--KKAAKELRLQGAEVV-QGDQDDQVIMELALNG---AYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT--SHHHHHHHHTTCEEE-ECCTTCHHHHHHHHTT---CSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC--CHHHHHHHHCCCEEE-EecCCCHHHHHHHHhc---CCEEEE
Confidence            4789999999999999998888888 89999986432  111233344455433 2222233456665554   999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      +.+.
T Consensus        79 ~a~~   82 (299)
T 2wm3_A           79 VTNY   82 (299)
T ss_dssp             CCCH
T ss_pred             eCCC
Confidence            9874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.80  E-value=0.00036  Score=59.06  Aligned_cols=34  Identities=21%  Similarity=0.306  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r   60 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADR   60 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            5789999999999999999988889999998874

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.79  E-value=0.017  Score=42.96  Aligned_cols=78  Identities=14%  Similarity=0.158  Sum_probs=52.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +.+|+|+|+ |.+|...++.+...|.+|+++.    .++++.+.++ .++...+ ..+....+.+.+..-.  ++|+||.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d----~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~~--~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLID----IDKDICKKASAEIDALVI-NGDCTKIKTLEDAGIE--DADMYIA   75 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHCSSEEE-ESCTTSHHHHHHTTTT--TCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEE----CCHHHHHHHHHhcCcEEE-EcCCCCHHHHHHcCcc--cCCEEEE
Confidence            357999998 9999999999998999998887    4677776665 4565433 2222222333322111  4999999


Q ss_pred             CCCcccH
Q 023007          268 CVGGNSA  274 (288)
Q Consensus       268 ~~g~~~~  274 (288)
                      |++....
T Consensus        76 ~~~~~~~   82 (140)
T 1lss_A           76 VTGKEEV   82 (140)
T ss_dssp             CCSCHHH
T ss_pred             eeCCchH
Confidence            9987654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.78  E-value=0.0076  Score=50.37  Aligned_cols=40  Identities=18%  Similarity=0.147  Sum_probs=32.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHH---cCCeEEEEEcCCCCCHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARH---RGIHSINIIRDRAGSDEAKE  231 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~---~g~~vi~~~~~~~~~~~~~~  231 (288)
                      .+++++|+|+++++|.+.++.+..   .|++|+++.+    ++++.+
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r----~~~~~~   47 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR----SESMLR   47 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES----CHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeC----CHHHHH
Confidence            467899999999999998887777   8999999984    555544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.77  E-value=0.0051  Score=58.24  Aligned_cols=84  Identities=13%  Similarity=0.084  Sum_probs=52.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC---------CCCHHHHHHHHhCCCCEEEeCCcc-cHHH-HHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR---------AGSDEAKEKLKGLGADEVFTESQL-EVKN-VKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~---------~~~~~~~~~~~~~g~~~v~~~~~~-~~~~-i~~~~  256 (288)
                      .|++++|+|+++++|.+.++.+...|++|++.....         ...++..+.+++.|...+.|..+. +.+. +.+..
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            478999999999999999999999999998875321         001111233445565555554332 2222 22222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|++||+.|.
T Consensus        87 ~~~G~iDiLVnNAGi  101 (604)
T 2et6_A           87 KNFGTVHVIINNAGI  101 (604)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            222359999999984

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.77  E-value=0.0062  Score=51.12  Aligned_cols=35  Identities=20%  Similarity=0.350  Sum_probs=31.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .++++||+|++|++|.+.++.+...|++|+++.+.
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   61 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS   61 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56899999999999999999998999999999864

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.76  E-value=0.0021  Score=51.47  Aligned_cols=31  Identities=19%  Similarity=0.269  Sum_probs=27.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +++|+|++|.+|...++.+. .|++|+++.+.
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~   35 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRH   35 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESS
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecC
Confidence            79999999999999988888 89999998853

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.75  E-value=0.011  Score=49.60  Aligned_cols=35  Identities=17%  Similarity=0.283  Sum_probs=31.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .++++||+|++|++|...++.+...|++|+++.+.
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   41 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH   41 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecC
Confidence            46899999999999999999999999999998854

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.75  E-value=0.007  Score=50.94  Aligned_cols=81  Identities=15%  Similarity=0.141  Sum_probs=49.7

Q ss_pred             CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC--EE-EeCCc-ccHH----HHHHHh
Q 023007          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD--EV-FTESQ-LEVK----NVKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~--~v-~~~~~-~~~~----~i~~~~  256 (288)
                      .+++++|+|+  ++++|.+.++.+...|++|+++.+.   .++..+.+ ++++..  .+ .|-.+ ..++    .+.+..
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD---RLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECS---CHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC---hHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            4689999998  8999999999998999999998842   22222333 345432  11 22222 1222    222222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      +..+++|++|+|.|.
T Consensus        83 g~~~~iD~lv~nAg~   97 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGF   97 (269)
T ss_dssp             CTTCCEEEEEECCCC
T ss_pred             CCCCCceEEEECCcc
Confidence            201149999999984

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.73  E-value=0.0023  Score=55.62  Aligned_cols=81  Identities=16%  Similarity=0.157  Sum_probs=49.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      -.+.+|||+|++|.+|...++.+...|++|+++.+......   +.++.+.--.++..+-.+.+.+.++....+ +|+||
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~-~D~vi   93 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIEGSVTDAGLLERAFDSFK-PTHVV   93 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG---GGSCSCTTEEEEECCTTCHHHHHHHHHHHC-CSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch---hhhhccCCceEEEeeCCCHHHHHHHHhhcC-CCEEE
Confidence            34679999999999999999988888999999986422111   111122111222222222334444333112 99999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      +|+|.
T Consensus        94 h~A~~   98 (330)
T 2pzm_A           94 HSAAA   98 (330)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99984

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.73  E-value=0.0031  Score=53.07  Aligned_cols=72  Identities=11%  Similarity=-0.007  Sum_probs=49.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      +++|+|+|++|.+|...++.+...|++|+++.+......       ..+. .++..+-.+.+.+.++..+   +|++|+|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------~~~~-~~~~~Dl~d~~~~~~~~~~---~D~vi~~   71 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-------GPNE-ECVQCDLADANAVNAMVAG---CDGIVHL   71 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-------CTTE-EEEECCTTCHHHHHHHHTT---CSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-------CCCC-EEEEcCCCCHHHHHHHHcC---CCEEEEC
Confidence            468999999999999999998889999999986432111       1111 2222222234566666553   9999999


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      .|.
T Consensus        72 Ag~   74 (267)
T 3rft_A           72 GGI   74 (267)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.73  E-value=0.008  Score=55.74  Aligned_cols=86  Identities=17%  Similarity=0.268  Sum_probs=54.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCC---CHHHHHHHHhCCCCEE-EeCCcccHHHHHHHhcCC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAG---SDEAKEKLKGLGADEV-FTESQLEVKNVKGLLANL  259 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~---~~~~~~~~~~~g~~~v-~~~~~~~~~~i~~~~~~~  259 (288)
                      .+++++++||+|++|++|...++.+...|+ +++.+.+....   .++..+.++..|.... +.-+-.+.+.+.++..+ 
T Consensus       255 ~~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          255 SWQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence            357889999999999999999888888899 47777653211   1223344556665422 22222223344443322 


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|+||+|.|.
T Consensus       334 ~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 YPPNAVFHTAGI  345 (511)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCcEEEECCcc
Confidence            259999999984

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.73  E-value=0.0092  Score=52.51  Aligned_cols=91  Identities=15%  Similarity=0.185  Sum_probs=63.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc------c-----------cH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ------L-----------EV  249 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~------~-----------~~  249 (288)
                      -+|++|.|.|. |.+|+.+++.++.+|++|+ +.+   .++++.++.++++++.+ +..+      +           ..
T Consensus       173 L~GktV~I~G~-GnVG~~~A~~l~~~GakVv-vsD---~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~  246 (355)
T 1c1d_A          173 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLL-VAD---TDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITT  246 (355)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EEC---SCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEE-EEe---CCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCH
Confidence            57899999998 9999999999999999999 444   34555556666775433 1111      0           01


Q ss_pred             HHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          250 KNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       250 ~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +.+..+     +.++|+|+..++.. ..+.+.|+.+|.++
T Consensus       247 ~~~~~l-----k~~iVie~AN~p~t~~eA~~~L~~~gIlv  281 (355)
T 1c1d_A          247 EVARTL-----DCSVVAGAANNVIADEAASDILHARGILY  281 (355)
T ss_dssp             HHHHHC-----CCSEECCSCTTCBCSHHHHHHHHHTTCEE
T ss_pred             HHHhhC-----CCCEEEECCCCCCCCHHHHHHHHhCCEEE
Confidence            222222     37899999888876 47788888887653

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.73  E-value=0.0058  Score=54.22  Aligned_cols=87  Identities=16%  Similarity=0.118  Sum_probs=56.3

Q ss_pred             CCCCCeEEEeCCCChHHHH-HHHHHHHcCCeEEEEEcCCCCCHH------------HHHHHHhCCCCEE-EeCCcc---c
Q 023007          186 LNSGDSIVQNGATSIVGQC-IIQIARHRGIHSINIIRDRAGSDE------------AKEKLKGLGADEV-FTESQL---E  248 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~-a~~la~~~g~~vi~~~~~~~~~~~------------~~~~~~~~g~~~v-~~~~~~---~  248 (288)
                      ...++++||+|+++++|++ ++.+|...|+.++++.......++            -.+.+++.|...+ ++-+..   .
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            3457999999999999998 456666789999998865443322            1245566776544 443322   2


Q ss_pred             HHH-HHHHhcCCCCccEEEECCCcc
Q 023007          249 VKN-VKGLLANLPEPALGFNCVGGN  272 (288)
Q Consensus       249 ~~~-i~~~~~~~g~~D~v~d~~g~~  272 (288)
                      .++ +.+.....|++|+++.+.+..
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccc
Confidence            222 223333455799999998854

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.71  E-value=0.0055  Score=57.01  Aligned_cols=87  Identities=10%  Similarity=0.067  Sum_probs=53.5

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEE--EcCC-------------CCCHHHHHHHHhCCCCEEE-eCCccc
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI--IRDR-------------AGSDEAKEKLKGLGADEVF-TESQLE  248 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~--~~~~-------------~~~~~~~~~~~~~g~~~v~-~~~~~~  248 (288)
                      .+++++++||+|++|++|...++.+...|++++++  .+..             ...++..+.+++.|....+ .-+-.+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            35788999999999999999888888889985554  4331             1223344455566654322 222122


Q ss_pred             ---HHHHHHHhcCCCCccEEEECCCc
Q 023007          249 ---VKNVKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       249 ---~~~i~~~~~~~g~~D~v~d~~g~  271 (288)
                         ++.+.+.....+++|.||+|.|.
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence               23333222233469999999984

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.70  E-value=0.0065  Score=53.37  Aligned_cols=81  Identities=14%  Similarity=0.113  Sum_probs=49.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHH--cCCeEEEEEcCCCCCH---------HHHHHHHhCCCCEEEeCCcccHHHHHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARH--RGIHSINIIRDRAGSD---------EAKEKLKGLGADEVFTESQLEVKNVKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~--~g~~vi~~~~~~~~~~---------~~~~~~~~~g~~~v~~~~~~~~~~i~~~~  256 (288)
                      .+.+|||+|++|.+|...++.+..  .|++|+++.+......         .+.......+. .++..+-.+.+.+.++.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~   87 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG-EVIAADINNPLDLRRLE   87 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCS-EEEECCTTCHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCc-eEEECCCCCHHHHHHhh
Confidence            468999999999999998888888  8999999986422000         00001111122 22222222334555551


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ..  ++|+||+|.|.
T Consensus        88 ~~--~~D~vih~A~~  100 (362)
T 3sxp_A           88 KL--HFDYLFHQAAV  100 (362)
T ss_dssp             TS--CCSEEEECCCC
T ss_pred             cc--CCCEEEECCcc
Confidence            22  49999999984

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.68  E-value=0.0054  Score=50.98  Aligned_cols=35  Identities=17%  Similarity=0.169  Sum_probs=31.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      -++++++|+|+++++|.+.++.+...|++|+++.+
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~   39 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYG   39 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC
Confidence            35789999999999999999999999999988754

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.66  E-value=0.0068  Score=51.89  Aligned_cols=95  Identities=11%  Similarity=0.037  Sum_probs=64.7

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-E--EEeCCcccHHH
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-E--VFTESQLEVKN  251 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~--v~~~~~~~~~~  251 (288)
                      .+.....++++++||-+|+ | .|..+..+++..|++++++.    .+++..+.++    ..|.. .  ++..+.     
T Consensus        63 ~~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-----  131 (302)
T 3hem_A           63 LALDKLNLEPGMTLLDIGC-G-WGSTMRHAVAEYDVNVIGLT----LSENQYAHDKAMFDEVDSPRRKEVRIQGW-----  131 (302)
T ss_dssp             HHHHTTCCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEE----CCHHHHHHHHHHHHHSCCSSCEEEEECCG-----
T ss_pred             HHHHHcCCCCcCEEEEeec-c-CcHHHHHHHHhCCCEEEEEE----CCHHHHHHHHHHHHhcCCCCceEEEECCH-----
Confidence            3445567899999999999 4 48889999999899998887    5787777664    34433 1  222111     


Q ss_pred             HHHHhcCCCCccEEEECCCc----------------ccHHHHHhhccCCCeeC
Q 023007          252 VKGLLANLPEPALGFNCVGG----------------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~g~----------------~~~~~a~~~l~~~G~~v  288 (288)
                       ..+ .+  .+|+|+....-                ..+..+.++|+|+|+++
T Consensus       132 -~~~-~~--~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~  180 (302)
T 3hem_A          132 -EEF-DE--PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRML  180 (302)
T ss_dssp             -GGC-CC--CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEE
T ss_pred             -HHc-CC--CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEE
Confidence             112 22  59998875321                22377889999999985

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.62  E-value=0.0016  Score=53.72  Aligned_cols=76  Identities=17%  Similarity=0.230  Sum_probs=48.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +++|+|+|++|.+|...++.+...|+  +|+++.+.....++    ...-+. .++..+-.+.+.+.+...   ++|++|
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~----~~~~~~-~~~~~D~~d~~~~~~~~~---~~d~vi   89 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE----EAYKNV-NQEVVDFEKLDDYASAFQ---GHDVGF   89 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS----GGGGGC-EEEECCGGGGGGGGGGGS---SCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccc----cccCCc-eEEecCcCCHHHHHHHhc---CCCEEE
Confidence            57999999999999999998888999  99999865321111    100112 222222112233444443   399999


Q ss_pred             ECCCcc
Q 023007          267 NCVGGN  272 (288)
Q Consensus       267 d~~g~~  272 (288)
                      +|.|..
T Consensus        90 ~~ag~~   95 (242)
T 2bka_A           90 CCLGTT   95 (242)
T ss_dssp             ECCCCC
T ss_pred             ECCCcc
Confidence            999863

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.62  E-value=0.012  Score=55.65  Aligned_cols=82  Identities=11%  Similarity=0.134  Sum_probs=53.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc--ccHHH-HHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ--LEVKN-VKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~-i~~~~~~~g~~D~  264 (288)
                      .|++++|+|+++++|.+.++.+...|++|++....  ..++..+.+++.|...+...-+  ...+. +.+.....|++|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence            47899999999999999999999999999887532  2344445566666544433222  11222 2222222235999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +||+.|.
T Consensus       399 LVnNAGi  405 (604)
T 2et6_A          399 LVNNAGI  405 (604)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.62  E-value=0.0023  Score=55.66  Aligned_cols=80  Identities=19%  Similarity=0.214  Sum_probs=48.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .+.+|||+|++|.+|...++.+...|++|+++.+......+   .++.+.--.++..+-.+.+.+.++..+. ++|+||+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~D~vih   95 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKDHPNLTFVEGSIADHALVNQLIGDL-QPDAVVH   95 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCCCTTEEEEECCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhhcCCceEEEEeCCCHHHHHHHHhcc-CCcEEEE
Confidence            45789999999999999999888889999999864221111   1111211122222222223444433221 3999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      |.|.
T Consensus        96 ~A~~   99 (333)
T 2q1w_A           96 TAAS   99 (333)
T ss_dssp             CCCC
T ss_pred             Ccee
Confidence            9874

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.60  E-value=0.011  Score=50.96  Aligned_cols=95  Identities=11%  Similarity=0.149  Sum_probs=64.0

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCCC---EEEeCCcccHHH
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGAD---EVFTESQLEVKN  251 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~  251 (288)
                      .+.....++++++||-+|+ |. |..+..+++..|++++++.    .+++..+.+++    .|..   .++..+.     
T Consensus        81 ~~~~~~~~~~~~~vLDiGc-G~-G~~~~~la~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-----  149 (318)
T 2fk8_A           81 LNLDKLDLKPGMTLLDIGC-GW-GTTMRRAVERFDVNVIGLT----LSKNQHARCEQVLASIDTNRSRQVLLQGW-----  149 (318)
T ss_dssp             HHHTTSCCCTTCEEEEESC-TT-SHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHTSCCSSCEEEEESCG-----
T ss_pred             HHHHhcCCCCcCEEEEEcc-cc-hHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCCCceEEEECCh-----
Confidence            3444566789999999998 44 8888899988899999887    57887776653    3432   1222111     


Q ss_pred             HHHHhcCCCCccEEEEC-----CCcc----cHHHHHhhccCCCeeC
Q 023007          252 VKGLLANLPEPALGFNC-----VGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~-----~g~~----~~~~a~~~l~~~G~~v  288 (288)
                       ..+ .+  .+|+|+.+     .+.+    .+..+.++|+|+|+++
T Consensus       150 -~~~-~~--~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~  191 (318)
T 2fk8_A          150 -EDF-AE--PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMT  191 (318)
T ss_dssp             -GGC-CC--CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred             -HHC-CC--CcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEE
Confidence             111 12  59999876     4322    2377789999999974

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.60  E-value=0.0058  Score=49.03  Aligned_cols=96  Identities=14%  Similarity=0.034  Sum_probs=63.0

Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHh----CCCC--EEEeCCcccHHHHH
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKG----LGAD--EVFTESQLEVKNVK  253 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~i~  253 (288)
                      .....++++++||-+|+ | .|..++.+++.. +.+++++.    .+++..+.+++    .+.+  .++..+..      
T Consensus        33 l~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~v~~~~~d~~------  100 (204)
T 3e05_A           33 LSKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALE----RNPQYLGFIRDNLKKFVARNVTLVEAFAP------  100 (204)
T ss_dssp             HHHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEE----CCHHHHHHHHHHHHHHTCTTEEEEECCTT------
T ss_pred             HHHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHHHHhCCCcEEEEeCChh------
Confidence            34467889999999999 4 488888888885 36788776    57887776643    3433  22222211      


Q ss_pred             HHhcCCCCccEEEECCCc----ccHHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVGG----NSASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~----~~~~~a~~~l~~~G~~v  288 (288)
                      +.....+.+|+|+.....    ..++.+.+.|+|+|+++
T Consensus       101 ~~~~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~  139 (204)
T 3e05_A          101 EGLDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIV  139 (204)
T ss_dssp             TTCTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEE
T ss_pred             hhhhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEE
Confidence            011111249999987652    23378889999999985

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.59  E-value=0.0035  Score=55.25  Aligned_cols=75  Identities=8%  Similarity=0.004  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcc-cHHHHHHHhcCCCCccEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQL-EVKNVKGLLANLPEPALG  265 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~-~~~~i~~~~~~~g~~D~v  265 (288)
                      +.+|||+|++|.+|...++.+... |.+|+++.+..    ++...+.. .+... +..+-. +.+.+.+...+   +|+|
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~----~~~~~~~~~~~v~~-~~~Dl~~d~~~~~~~~~~---~d~V   95 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT----DRLGDLVKHERMHF-FEGDITINKEWVEYHVKK---CDVI   95 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCC----TTTGGGGGSTTEEE-EECCTTTCHHHHHHHHHH---CSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCCh----hhhhhhccCCCeEE-EeCccCCCHHHHHHHhcc---CCEE
Confidence            478999999999999999888887 89999998642    22222211 23332 222222 23444444443   9999


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      |+|.+.
T Consensus        96 ih~A~~  101 (372)
T 3slg_A           96 LPLVAI  101 (372)
T ss_dssp             EECBCC
T ss_pred             EEcCcc
Confidence            999875

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.58  E-value=0.0048  Score=56.34  Aligned_cols=82  Identities=18%  Similarity=0.227  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHH-HHHHHhCCCCEE-EeCCc-ccHHHHHH-HhcCCCC-c
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA-KEKLKGLGADEV-FTESQ-LEVKNVKG-LLANLPE-P  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~-~~~~~~~g~~~v-~~~~~-~~~~~i~~-~~~~~g~-~  262 (288)
                      ++++++|+|++|++|...++.+...|++|+++.+..  ..+. .+..++++...+ .|-.+ ..++.+.+ .....++ +
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~--~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG--AAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG--GHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc--cHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            578999999999999998888888899998887431  2222 233445555432 22222 22322222 2222223 9


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|+|.|.
T Consensus       290 d~lV~nAGv  298 (454)
T 3u0b_A          290 DILVNNAGI  298 (454)
T ss_dssp             SEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999885

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.57  E-value=0.0085  Score=52.15  Aligned_cols=71  Identities=14%  Similarity=0.164  Sum_probs=47.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .++++|||+|++|.+|...++.+...|++|+++.+...    +      .+...+. .+-.+.+.+.+...+   +|+||
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~----~------~~~~~~~-~Dl~d~~~~~~~~~~---~d~vi   82 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS----G------TGGEEVV-GSLEDGQALSDAIMG---VSAVL   82 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC----S------SCCSEEE-SCTTCHHHHHHHHTT---CSEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC----C------CCccEEe-cCcCCHHHHHHHHhC---CCEEE
Confidence            45679999999999999999999999999999986421    1      2333222 122223445555443   99999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      .|.+.
T Consensus        83 h~A~~   87 (347)
T 4id9_A           83 HLGAF   87 (347)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.57  E-value=0.011  Score=49.41  Aligned_cols=79  Identities=15%  Similarity=0.165  Sum_probs=48.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-E--eCCc-ccHHH-HHHHhcCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL-KGLGADEV-F--TESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~--~~~~-~~~~~-i~~~~~~~g  260 (288)
                      |++++|+|+++++|.+.++.+...  |++|+.+.    .++++.+.+ ++++.... +  |-.+ ..++. +.+.....|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVA----RSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEE----SCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEec----CCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999988766665  47888777    466665544 34443322 2  2122 12222 111112223


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|++.|.
T Consensus        78 ~id~lvnnAg~   88 (254)
T 3kzv_A           78 KIDSLVANAGV   88 (254)
T ss_dssp             CCCEEEEECCC
T ss_pred             CccEEEECCcc
Confidence            59999999985

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=96.57  E-value=0.011  Score=51.14  Aligned_cols=80  Identities=10%  Similarity=0.065  Sum_probs=48.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC-CC-CEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GA-DEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-g~-~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      +|||+|++|.+|...++.+...|++|+++.+.....++..+.++++ +. -.++..+-.+.+.+.+...+.+ +|+||+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~D~vih~   80 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHA-IDTVIHF   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTT-CSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccC-CCEEEEC
Confidence            6899999999999999988889999998864322223333333322 21 1222222222234444333223 9999999


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      .|.
T Consensus        81 A~~   83 (338)
T 1udb_A           81 AGL   83 (338)
T ss_dssp             CSC
T ss_pred             Ccc
Confidence            984

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.56  E-value=0.013  Score=54.10  Aligned_cols=82  Identities=20%  Similarity=0.265  Sum_probs=51.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCC---CCHHHHHHHHhCCCCEEEe-CCccc---HHHHHHHhcCCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRA---GSDEAKEKLKGLGADEVFT-ESQLE---VKNVKGLLANLPE  261 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~---~~~~~~~~~~~~g~~~v~~-~~~~~---~~~i~~~~~~~g~  261 (288)
                      +++||+|++|++|...++.+...|+ +++.+.+...   ..++..+.+++.|....+. -+-.+   ++.+.+.....++
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~  319 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAP  319 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSC
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            8999999999999998888888899 5666664311   1123344556677653322 22122   2333332222245


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus       320 ld~vVh~AGv  329 (496)
T 3mje_A          320 LTAVFHSAGV  329 (496)
T ss_dssp             EEEEEECCCC
T ss_pred             CeEEEECCcc
Confidence            9999999985

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.54  E-value=0.01  Score=50.80  Aligned_cols=70  Identities=14%  Similarity=0.187  Sum_probs=47.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      .+|||+|++|.+|...++.+...|.+|+++.+.    +.+.+ ++  +... +..+-. .+.+.+...+   +|+||+|.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----~~~~~-~~--~~~~-~~~Dl~-~~~~~~~~~~---~d~Vih~a   70 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS----IGNKA-IN--DYEY-RVSDYT-LEDLINQLND---VDAVVHLA   70 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC----CC--------CCEE-EECCCC-HHHHHHHTTT---CSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC----CCccc-CC--ceEE-EEcccc-HHHHHHhhcC---CCEEEEcc
Confidence            689999999999999999999999999999964    22222 22  3332 222222 3455555553   99999998


Q ss_pred             Cc
Q 023007          270 GG  271 (288)
Q Consensus       270 g~  271 (288)
                      +.
T Consensus        71 ~~   72 (311)
T 3m2p_A           71 AT   72 (311)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.54  E-value=0.012  Score=53.96  Aligned_cols=87  Identities=14%  Similarity=0.171  Sum_probs=54.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHh-CCCCEE-EeCCcccHHHHHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKG-LGADEV-FTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v-~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      ++++|+|+|+ |++|.+++..+... |.+|+++.    .+.++.+.+.+ .+...+ ++..  +.+.+.+...+   +|+
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~----R~~~ka~~la~~~~~~~~~~D~~--d~~~l~~~l~~---~Dv   91 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVAC----RTLANAQALAKPSGSKAISLDVT--DDSALDKVLAD---NDV   91 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEE----SSHHHHHHHHGGGTCEEEECCTT--CHHHHHHHHHT---SSE
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEE----CCHHHHHHHHHhcCCcEEEEecC--CHHHHHHHHcC---CCE
Confidence            4578999998 99999988888877 67877777    46666655533 233221 2222  22344444443   999


Q ss_pred             EEECCCcccH-HHHHhhccCC
Q 023007          265 GFNCVGGNSA-SKVLKFLRFR  284 (288)
Q Consensus       265 v~d~~g~~~~-~~a~~~l~~~  284 (288)
                      ||+|++.... .....+++++
T Consensus        92 VIn~tp~~~~~~v~~a~l~~g  112 (467)
T 2axq_A           92 VISLIPYTFHPNVVKSAIRTK  112 (467)
T ss_dssp             EEECSCGGGHHHHHHHHHHHT
T ss_pred             EEECCchhhhHHHHHHHHhcC
Confidence            9999997543 3333455444

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.53  E-value=0.012  Score=48.31  Aligned_cols=88  Identities=14%  Similarity=0.043  Sum_probs=57.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++|||.|+ |.+|...++.+...|++|+++...  .+++-.++..+.+.. .+. +....+.    ..   ++|+||-
T Consensus        30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~--~~~~l~~l~~~~~i~-~i~-~~~~~~d----L~---~adLVIa   97 (223)
T 3dfz_A           30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPT--VSAEINEWEAKGQLR-VKR-KKVGEED----LL---NVFFIVV   97 (223)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSS--CCHHHHHHHHTTSCE-EEC-SCCCGGG----SS---SCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCC--CCHHHHHHHHcCCcE-EEE-CCCCHhH----hC---CCCEEEE
Confidence            5689999999 999999999999999999988743  344433444443333 222 1111001    11   3999999


Q ss_pred             CCCcccHHHHHhhccCCCee
Q 023007          268 CVGGNSASKVLKFLRFREEQ  287 (288)
Q Consensus       268 ~~g~~~~~~a~~~l~~~G~~  287 (288)
                      +++.+..+..+......|.+
T Consensus        98 AT~d~~~N~~I~~~ak~gi~  117 (223)
T 3dfz_A           98 ATNDQAVNKFVKQHIKNDQL  117 (223)
T ss_dssp             CCCCTHHHHHHHHHSCTTCE
T ss_pred             CCCCHHHHHHHHHHHhCCCE
Confidence            99998886555544445544

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.53  E-value=0.0094  Score=51.63  Aligned_cols=78  Identities=18%  Similarity=0.145  Sum_probs=49.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHH-Hh----CCCC-EEEeCCcccHHHHHHHhcCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL-KG----LGAD-EVFTESQLEVKNVKGLLANL  259 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~-~~----~g~~-~v~~~~~~~~~~i~~~~~~~  259 (288)
                      -.|++++|+|+ |++|.+++..+...|+ +++++.++.. ..++.+.+ ++    ++.. .+++..+  .+.+.+...  
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~-~~~~a~~la~~~~~~~~~~~~~~~~~~--~~~l~~~l~--  225 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDD-FYANAEKTVEKINSKTDCKAQLFDIED--HEQLRKEIA--  225 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSST-THHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHH--
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCc-hHHHHHHHHHHhhhhcCCceEEeccch--HHHHHhhhc--
Confidence            46899999998 9999999999999999 7777774310 15554433 22    3322 2233332  123333333  


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                       .+|+||+|++-
T Consensus       226 -~aDiIINaTp~  236 (315)
T 3tnl_A          226 -ESVIFTNATGV  236 (315)
T ss_dssp             -TCSEEEECSST
T ss_pred             -CCCEEEECccC
Confidence             39999999863

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.53  E-value=0.0052  Score=51.91  Aligned_cols=74  Identities=22%  Similarity=0.199  Sum_probs=50.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      ++|||+|++|.+|...++.+...  |++|+++.+.    +++.+.+...+... +..+-.+.+.+.+...+   +|+||+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~----~~~~~~l~~~~~~~-~~~D~~d~~~l~~~~~~---~d~vi~   72 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRN----VEKASTLADQGVEV-RHGDYNQPESLQKAFAG---VSKLLF   72 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESC----TTTTHHHHHTTCEE-EECCTTCHHHHHHHTTT---CSEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcC----HHHHhHHhhcCCeE-EEeccCCHHHHHHHHhc---CCEEEE
Confidence            36999999999999999888887  9999999864    33333333344432 22222233456555543   999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      +.+.
T Consensus        73 ~a~~   76 (287)
T 2jl1_A           73 ISGP   76 (287)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            9885

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=96.49  E-value=0.011  Score=51.18  Aligned_cols=35  Identities=20%  Similarity=0.436  Sum_probs=30.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+++|||+|++|.+|...++.+...|++|+++++.
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~   38 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRD   38 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECC
Confidence            46899999999999999999888899999988864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.49  E-value=0.004  Score=51.78  Aligned_cols=35  Identities=20%  Similarity=0.195  Sum_probs=31.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+++++|+|++|++|.+.++.+...|++|+++.+.
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   48 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG   48 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999988899999999854

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=96.49  E-value=0.004  Score=52.29  Aligned_cols=90  Identities=9%  Similarity=-0.013  Sum_probs=63.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCCcccHHHHHHHhcCCCCccE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      .++.+||.+|+ |. |..+..+++.. |.+++++.    .+++..+.+++.+.. .++..+...   + .+..+  .+|+
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~d~~~---~-~~~~~--~fD~  151 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLD----VSKVAIKAAAKRYPQVTFCVASSHR---L-PFSDT--SMDA  151 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEE----SCHHHHHHHHHHCTTSEEEECCTTS---C-SBCTT--CEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEe----CCHHHHHHHHHhCCCcEEEEcchhh---C-CCCCC--ceeE
Confidence            67899999999 66 88888999886 77888887    588888888765432 232222111   0 01122  4999


Q ss_pred             EEECCCcccHHHHHhhccCCCeeC
Q 023007          265 GFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       265 v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      |+.......+..+.+.|+|+|+++
T Consensus       152 v~~~~~~~~l~~~~~~L~pgG~l~  175 (269)
T 1p91_A          152 IIRIYAPCKAEELARVVKPGGWVI  175 (269)
T ss_dssp             EEEESCCCCHHHHHHHEEEEEEEE
T ss_pred             EEEeCChhhHHHHHHhcCCCcEEE
Confidence            997655556699999999999874

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.47  E-value=0.012  Score=54.20  Aligned_cols=87  Identities=20%  Similarity=0.236  Sum_probs=53.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCC---HHHHHHHHhCCCCEE-EeCCcccHHHHHHHh---
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGS---DEAKEKLKGLGADEV-FTESQLEVKNVKGLL---  256 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~---~~~~~~~~~~g~~~v-~~~~~~~~~~i~~~~---  256 (288)
                      .+++++++||+|++|++|...++.+...|++ ++.+.+.....   ++..+.++..|.... +.-+-.+.+.+.++.   
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            3678899999999999999988888888995 77777532111   122344556665422 222212222333222   


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...+++|.||++.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence            223458999999984

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.45  E-value=0.0069  Score=51.09  Aligned_cols=73  Identities=15%  Similarity=0.148  Sum_probs=48.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          191 SIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      +|||+|++|.+|...++.+...  |++|+++.+.    +++.+.+...+... +..+-.+.+.+.+...+   +|+||++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~----~~~~~~~~~~~~~~-~~~D~~d~~~~~~~~~~---~d~vi~~   72 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRN----PAKAQALAAQGITV-RQADYGDEAALTSALQG---VEKLLLI   72 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESC----TTTCHHHHHTTCEE-EECCTTCHHHHHHHTTT---CSEEEEC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcC----hHhhhhhhcCCCeE-EEcCCCCHHHHHHHHhC---CCEEEEe
Confidence            4899999999999999888887  9999999864    33333333344432 22222233456555543   9999999


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      .+.
T Consensus        73 a~~   75 (286)
T 2zcu_A           73 SSS   75 (286)
T ss_dssp             C--
T ss_pred             CCC
Confidence            885

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.44  E-value=0.0015  Score=53.88  Aligned_cols=96  Identities=16%  Similarity=0.129  Sum_probs=61.3

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCcccHHHHHHH
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNVKGL  255 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~i~~~  255 (288)
                      ....++++||-+|+ | .|..+..+++.. +.+++++.    .+++..+.++    ..|..   .++.....  +.+...
T Consensus        50 ~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~  121 (233)
T 2gpy_A           50 LKMAAPARILEIGT-A-IGYSAIRMAQALPEATIVSIE----RDERRYEEAHKHVKALGLESRIELLFGDAL--QLGEKL  121 (233)
T ss_dssp             HHHHCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEEC----CCHHHHHHHHHHHHHTTCTTTEEEECSCGG--GSHHHH
T ss_pred             HhccCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEECCHH--HHHHhc
Confidence            44567889999998 4 788888999887 56787776    5777776664    34542   22222211  112222


Q ss_pred             hcCCCCccEEEECCCc----ccHHHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGG----NSASKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~----~~~~~a~~~l~~~G~~v  288 (288)
                      ... +.+|+|+....-    ..+..+.+.|+|+|+++
T Consensus       122 ~~~-~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv  157 (233)
T 2gpy_A          122 ELY-PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLIL  157 (233)
T ss_dssp             TTS-CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEE
T ss_pred             ccC-CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            111 149998876553    22377889999999875

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.42  E-value=0.0067  Score=50.09  Aligned_cols=99  Identities=15%  Similarity=0.112  Sum_probs=62.2

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHH----hCCCCE-EEeCCcccHHHHHHHh
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGADE-VFTESQLEVKNVKGLL  256 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~i~~~~  256 (288)
                      ....++++||-+|+ | .|..+..+++..  +.+++++.    .+++..+.++    ..|.+. +-....+..+.+..+.
T Consensus        56 ~~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~  129 (239)
T 2hnk_A           56 TKISGAKRIIEIGT-F-TGYSSLCFASALPEDGKILCCD----VSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLI  129 (239)
T ss_dssp             HHHHTCSEEEEECC-T-TCHHHHHHHHHSCTTCEEEEEE----SCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH
T ss_pred             HHhhCcCEEEEEeC-C-CCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHH
Confidence            44567889999998 4 688888999987  56888776    5777766654    345432 2111111112233332


Q ss_pred             cC------------C-CCccEEEECCCccc----HHHHHhhccCCCeeC
Q 023007          257 AN------------L-PEPALGFNCVGGNS----ASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~------------~-g~~D~v~d~~g~~~----~~~a~~~l~~~G~~v  288 (288)
                      ..            . +.+|+|+.......    +..+.++|+++|+++
T Consensus       130 ~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv  178 (239)
T 2hnk_A          130 DSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLI  178 (239)
T ss_dssp             HCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEE
T ss_pred             hhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            11            0 24999998766432    377789999999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.41  E-value=0.0069  Score=52.50  Aligned_cols=73  Identities=18%  Similarity=0.147  Sum_probs=47.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      +|||+|++|.+|...++.+...|++|+++.+..    .+.+.+...+.. ++..+-.+.+.+.+...+   +|+||+|.+
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----~~~~~l~~~~~~-~~~~Dl~d~~~~~~~~~~---~d~vih~a~   86 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPS----SQIQRLAYLEPE-CRVAEMLDHAGLERALRG---LDGVIFSAG   86 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTT----SCGGGGGGGCCE-EEECCTTCHHHHHHHTTT---CSEEEEC--
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecCh----HhhhhhccCCeE-EEEecCCCHHHHHHHHcC---CCEEEECCc
Confidence            799999999999999999988999999998643    222222222332 222222233456555543   999999987


Q ss_pred             c
Q 023007          271 G  271 (288)
Q Consensus       271 ~  271 (288)
                      .
T Consensus        87 ~   87 (342)
T 2x4g_A           87 Y   87 (342)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.41  E-value=0.016  Score=50.98  Aligned_cols=78  Identities=21%  Similarity=0.237  Sum_probs=50.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC-cccHHHHHHHhcCCCCccEEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES-QLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~-~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +.+|+|+|++|.+|...++.+...|.+|+++++...  ....+.+.....-.++..+ -.+.+.+.+...+   +|+||.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~--~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~---~d~Vi~   79 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK--GLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEG---AHLAFI   79 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC--SHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTT---CSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCC--hhhHHHHhhcCCcEEEECCccCCHHHHHHHHhc---CCEEEE
Confidence            568999999999999999888888999999986432  1111333333212233223 2233455555543   999998


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      +.+.
T Consensus        80 ~a~~   83 (352)
T 1xgk_A           80 NTTS   83 (352)
T ss_dssp             CCCS
T ss_pred             cCCC
Confidence            8764

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.40  E-value=0.026  Score=45.88  Aligned_cols=95  Identities=9%  Similarity=0.007  Sum_probs=62.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcC------CeEEEEEcCCCCCHHHHHHHHh----CC-----CC--EEEeCCcc
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRG------IHSINIIRDRAGSDEAKEKLKG----LG-----AD--EVFTESQL  247 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g------~~vi~~~~~~~~~~~~~~~~~~----~g-----~~--~v~~~~~~  247 (288)
                      .++++++||-+|+ |. |..+..+++..+      .+++++.    .+++..+.+++    .+     .+  .++..+..
T Consensus        77 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~  150 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-GS-GYLTVCMAIKMNVLENKNSYVIGLE----RVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIY  150 (227)
T ss_dssp             TSCTTCEEEEESC-TT-SHHHHHHHHHTTTTTCTTCEEEEEE----SCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGG
T ss_pred             hCCCCCEEEEECC-CC-CHHHHHHHHHhcccCCCCCEEEEEe----CCHHHHHHHHHHHHHcCccccccCCEEEEECChH
Confidence            5789999999998 44 888888888876      5888887    57777766643    23     11  22222211


Q ss_pred             c-HHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          248 E-VKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       248 ~-~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      . ..... ...+  .+|+|+.+.....+ ..+.+.|+++|+++
T Consensus       151 ~~~~~~~-~~~~--~fD~I~~~~~~~~~~~~~~~~LkpgG~lv  190 (227)
T 2pbf_A          151 QVNEEEK-KELG--LFDAIHVGASASELPEILVDLLAENGKLI  190 (227)
T ss_dssp             GCCHHHH-HHHC--CEEEEEECSBBSSCCHHHHHHEEEEEEEE
T ss_pred             hcccccC-ccCC--CcCEEEECCchHHHHHHHHHhcCCCcEEE
Confidence            1 00000 1122  49999887766555 88999999999975

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.39  E-value=0.0051  Score=51.24  Aligned_cols=97  Identities=14%  Similarity=0.076  Sum_probs=64.8

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC----EEEeCCcccHHHHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD----EVFTESQLEVKNVKGL  255 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~i~~~  255 (288)
                      +.....++++.+||-+|+ | .|..+..+++..+++++++.    .+++..+.+++....    .++..+..   .. .+
T Consensus        47 ~~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~~~~d~~---~~-~~  116 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGS-G-LGGGCMYINEKYGAHTHGID----ICSNIVNMANERVSGNNKIIFEANDIL---TK-EF  116 (266)
T ss_dssp             HTTTCCCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHTCCSCTTEEEEECCTT---TC-CC
T ss_pred             HHHhcCCCCCCEEEEECC-C-CCHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHHhhcCCCeEEEECccc---cC-CC
Confidence            334456789999999998 4 78888888888789999987    688888888765432    12211111   10 11


Q ss_pred             hcCCCCccEEEECCCccc---------HHHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGNS---------ASKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~~---------~~~a~~~l~~~G~~v  288 (288)
                      ..+  .+|+|+.+..-..         +..+.+.|+|+|+++
T Consensus       117 ~~~--~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~  156 (266)
T 3ujc_A          117 PEN--NFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLL  156 (266)
T ss_dssp             CTT--CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             CCC--cEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEE
Confidence            112  5999998643221         377788999999874

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.39  E-value=0.013  Score=53.63  Aligned_cols=86  Identities=15%  Similarity=0.078  Sum_probs=62.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      .-.|++|+|+|. |.+|..+++.++.+|++|+++.    .+..+.......|+. +.        .+.++..   ..|+|
T Consensus       254 ~l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d----~~~~~~~~a~~~g~~-~~--------~l~ell~---~aDiV  316 (479)
T 1v8b_A          254 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITE----IDPICAIQAVMEGFN-VV--------TLDEIVD---KGDFF  316 (479)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SCHHHHHHHHTTTCE-EC--------CHHHHTT---TCSEE
T ss_pred             ccCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEe----CChhhHHHHHHcCCE-ec--------CHHHHHh---cCCEE
Confidence            457899999998 9999999999999999999987    456554344455652 11        1223333   38999


Q ss_pred             EECCCcccH--HHHHhhccCCCeeC
Q 023007          266 FNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       266 ~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                      +-+++....  ...++.|+++..++
T Consensus       317 i~~~~t~~lI~~~~l~~MK~gaili  341 (479)
T 1v8b_A          317 ITCTGNVDVIKLEHLLKMKNNAVVG  341 (479)
T ss_dssp             EECCSSSSSBCHHHHTTCCTTCEEE
T ss_pred             EECCChhhhcCHHHHhhcCCCcEEE
Confidence            999876554  67788899987764

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.37  E-value=0.012  Score=54.00  Aligned_cols=86  Identities=14%  Similarity=0.026  Sum_probs=62.3

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      .-.|++|+|+|. |.+|..+++.++.+|++|+++.    .+..+.......|... .        .+.++..   ..|+|
T Consensus       274 ~L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d----~~~~~~~~a~~~G~~~-~--------~l~ell~---~aDiV  336 (494)
T 3d64_A          274 MIAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTE----IDPICALQAAMEGYRV-V--------TMEYAAD---KADIF  336 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEC----SCHHHHHHHHTTTCEE-C--------CHHHHTT---TCSEE
T ss_pred             ccCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEe----CChHhHHHHHHcCCEe-C--------CHHHHHh---cCCEE
Confidence            457899999998 9999999999999999999987    4555543334456531 1        1223333   38999


Q ss_pred             EECCCcccH--HHHHhhccCCCeeC
Q 023007          266 FNCVGGNSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       266 ~d~~g~~~~--~~a~~~l~~~G~~v  288 (288)
                      +.+++....  ...++.|+++..++
T Consensus       337 i~~~~t~~lI~~~~l~~MK~gAilI  361 (494)
T 3d64_A          337 VTATGNYHVINHDHMKAMRHNAIVC  361 (494)
T ss_dssp             EECSSSSCSBCHHHHHHCCTTEEEE
T ss_pred             EECCCcccccCHHHHhhCCCCcEEE
Confidence            999876553  67788999987663

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.36  E-value=0.006  Score=48.91  Aligned_cols=75  Identities=19%  Similarity=0.188  Sum_probs=46.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      ++++|+|++|++|...++.+...  +|+++.    .++++.+.+ ++++. .++..+-.+.+.+.++....+++|++|+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~----r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSG----RRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEEC----SCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEE----CCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            47999999999999887776665  888887    456555443 33332 33322222223333332212259999999


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      .|.
T Consensus        74 ag~   76 (207)
T 2yut_A           74 VGK   76 (207)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            884

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.36  E-value=0.027  Score=49.89  Aligned_cols=33  Identities=6%  Similarity=0.087  Sum_probs=29.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHH-HcCCeEEEEEcC
Q 023007          190 DSIVQNGATSIVGQCIIQIAR-HRGIHSINIIRD  222 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~-~~g~~vi~~~~~  222 (288)
                      .+|||+|++|.+|...++.+. ..|++|+++.+.
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~   36 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSL   36 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecC
Confidence            479999999999999988888 899999998854

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=96.35  E-value=0.0068  Score=52.06  Aligned_cols=33  Identities=24%  Similarity=0.355  Sum_probs=30.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      |++|||+|++|.+|...++.+...|++|+++.+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r   33 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIR   33 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEe
Confidence            578999999999999999988889999998875

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.35  E-value=0.014  Score=51.62  Aligned_cols=86  Identities=13%  Similarity=0.112  Sum_probs=58.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      +|+|+|+ |.+|..+++.+.. ..+|.+..    .+.++.+.+++......+|..  +.+.+.++..+   .|+|++|++
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~----~~~~~~~~~~~~~~~~~~d~~--d~~~l~~~~~~---~DvVi~~~p   86 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGD----VNNENLEKVKEFATPLKVDAS--NFDKLVEVMKE---FELVIGALP   86 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEE----SCHHHHHHHTTTSEEEECCTT--CHHHHHHHHTT---CSEEEECCC
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEE----cCHHHHHHHhccCCcEEEecC--CHHHHHHHHhC---CCEEEEecC
Confidence            6999999 9999998888754 56777665    577777777654322223332  34566666664   999999998


Q ss_pred             cccH-HHHHhhccCCCee
Q 023007          271 GNSA-SKVLKFLRFREEQ  287 (288)
Q Consensus       271 ~~~~-~~a~~~l~~~G~~  287 (288)
                      ...- ..+-.|++.+=.|
T Consensus        87 ~~~~~~v~~~~~~~g~~y  104 (365)
T 3abi_A           87 GFLGFKSIKAAIKSKVDM  104 (365)
T ss_dssp             GGGHHHHHHHHHHHTCEE
T ss_pred             CcccchHHHHHHhcCcce
Confidence            7654 5555566655443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.34  E-value=0.02  Score=52.16  Aligned_cols=88  Identities=14%  Similarity=0.145  Sum_probs=53.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +++|+|+|+ |.+|..+++.+...|++|+++.    .+.++.+.+. .++....+..+-.+.+.+.++..   ++|+|++
T Consensus         3 ~k~VlViGa-G~iG~~ia~~L~~~G~~V~v~~----R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~---~~DvVIn   74 (450)
T 1ff9_A            3 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVAC----RTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA---KHDLVIS   74 (450)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEE----SSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT---TSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCcCEEEEEE----CCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc---CCcEEEE
Confidence            578999985 9999999988888899987777    4566655432 33321122112122234444444   3999999


Q ss_pred             CCCcccH-HHHHhhccCC
Q 023007          268 CVGGNSA-SKVLKFLRFR  284 (288)
Q Consensus       268 ~~g~~~~-~~a~~~l~~~  284 (288)
                      |++.... ..+..+++++
T Consensus        75 ~a~~~~~~~i~~a~l~~g   92 (450)
T 1ff9_A           75 LIPYTFHATVIKSAIRQK   92 (450)
T ss_dssp             CCC--CHHHHHHHHHHHT
T ss_pred             CCccccchHHHHHHHhCC
Confidence            9986432 3334444443

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.30  E-value=0.0088  Score=49.68  Aligned_cols=97  Identities=11%  Similarity=-0.050  Sum_probs=64.7

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHhC-----CCCEE--EeCCcccHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGL-----GADEV--FTESQLEVK  250 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~-----g~~~v--~~~~~~~~~  250 (288)
                      +.....++++++||-.|+ | .|..+..+++..  +.+++++.    .+++..+.+++.     |.+.+  +..+...  
T Consensus        88 ~~~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D----~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~--  159 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYE----ARPHHLAQAERNVRAFWQVENVRFHLGKLEE--  159 (258)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEE----SCHHHHHHHHHHHHHHCCCCCEEEEESCGGG--
T ss_pred             HHHHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEe----CCHHHHHHHHHHHHHhcCCCCEEEEECchhh--
Confidence            334467899999999998 5 488888999886  56888887    578877776542     53322  2221111  


Q ss_pred             HHHHHhcCCCCccEEEECCCcc--cHHHHHhhccCCCeeC
Q 023007          251 NVKGLLANLPEPALGFNCVGGN--SASKVLKFLRFREEQW  288 (288)
Q Consensus       251 ~i~~~~~~~g~~D~v~d~~g~~--~~~~a~~~l~~~G~~v  288 (288)
                       . .+..+  .+|+|+......  .+..+.+.|+++|+++
T Consensus       160 -~-~~~~~--~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~  195 (258)
T 2pwy_A          160 -A-ELEEA--AYDGVALDLMEPWKVLEKAALALKPDRFLV  195 (258)
T ss_dssp             -C-CCCTT--CEEEEEEESSCGGGGHHHHHHHEEEEEEEE
T ss_pred             -c-CCCCC--CcCEEEECCcCHHHHHHHHHHhCCCCCEEE
Confidence             0 01112  499998776654  3488999999999874

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.30  E-value=0.0025  Score=51.29  Aligned_cols=139  Identities=12%  Similarity=0.070  Sum_probs=77.7

Q ss_pred             CCCCCEEEecCCCCcccceEEE-eeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHH
Q 023007          127 LAPGDWVIPSPPSSGTWQSYVV-KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCI  205 (288)
Q Consensus       127 ~~~Gd~V~~~~~~~G~~a~~~~-~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a  205 (288)
                      ++.|+.+...+    .|.+|.. .+....+.+++++.+..+..-.  .......+..  .++++++||-.|+ |. |..+
T Consensus         6 ~~~~~~~~~~p----~w~~~~~~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~l~~--~~~~~~~vLDiG~-G~-G~~~   75 (205)
T 3grz_A            6 INLSRHLAIVP----EWEDYQPVFKDQEIIRLDPGLAFGTGNHQT--TQLAMLGIER--AMVKPLTVADVGT-GS-GILA   75 (205)
T ss_dssp             EEEETTEEEEE----TTCCCCCSSTTCEEEEESCC-----CCHHH--HHHHHHHHHH--HCSSCCEEEEETC-TT-SHHH
T ss_pred             EEECCcEEEec----cccccccCCCCceeEEecCCcccCCCCCcc--HHHHHHHHHH--hccCCCEEEEECC-CC-CHHH
Confidence            44566555432    5677766 6677888888887765542100  0111112221  2678899999998 43 6777


Q ss_pred             HHHHHHcCC-eEEEEEcCCCCCHHHHHHHHh----CCCC--EEEeCCcccHHHHHHHhcCCCCccEEEECCCcccH----
Q 023007          206 IQIARHRGI-HSINIIRDRAGSDEAKEKLKG----LGAD--EVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA----  274 (288)
Q Consensus       206 ~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~----  274 (288)
                      ..+++. +. +++++.    .+++..+.+++    .+..  .++..+..      ....+  .+|+|+.+..-...    
T Consensus        76 ~~l~~~-~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~v~~~~~d~~------~~~~~--~fD~i~~~~~~~~~~~~l  142 (205)
T 3grz_A           76 IAAHKL-GAKSVLATD----ISDESMTAAEENAALNGIYDIALQKTSLL------ADVDG--KFDLIVANILAEILLDLI  142 (205)
T ss_dssp             HHHHHT-TCSEEEEEE----SCHHHHHHHHHHHHHTTCCCCEEEESSTT------TTCCS--CEEEEEEESCHHHHHHHG
T ss_pred             HHHHHC-CCCEEEEEE----CCHHHHHHHHHHHHHcCCCceEEEecccc------ccCCC--CceEEEECCcHHHHHHHH
Confidence            777764 55 777776    57777766643    4543  22222211      11122  59999876654432    


Q ss_pred             HHHHhhccCCCeeC
Q 023007          275 SKVLKFLRFREEQW  288 (288)
Q Consensus       275 ~~a~~~l~~~G~~v  288 (288)
                      ..+.+.|+++|+++
T Consensus       143 ~~~~~~L~~gG~l~  156 (205)
T 3grz_A          143 PQLDSHLNEDGQVI  156 (205)
T ss_dssp             GGSGGGEEEEEEEE
T ss_pred             HHHHHhcCCCCEEE
Confidence            45567889999874

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.29  E-value=0.017  Score=47.40  Aligned_cols=34  Identities=18%  Similarity=0.210  Sum_probs=30.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +++++|+|++|++|...++.+...|++|+++.+.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   35 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLR   35 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccC
Confidence            5789999999999999988888889999999854

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.29  E-value=0.0059  Score=52.89  Aligned_cols=97  Identities=18%  Similarity=0.157  Sum_probs=64.1

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKN  251 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~  251 (288)
                      +.....++++++||-+|+ |. |..+..+++..+  .+|+++.    .+++..+.++    ..|...+  +..+...  .
T Consensus        67 l~~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD----~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~--~  138 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVE----YSRKICEIAKRNVERLGIENVIFVCGDGYY--G  138 (317)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEESCGGG--C
T ss_pred             HHHhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCeEEEECChhh--c
Confidence            334467889999999998 44 788888888753  3588887    5777776664    3454322  2211110  0


Q ss_pred             HHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          252 VKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      ..  ..+  ++|+|+....-+.. +.+.+.|+|+|+++
T Consensus       139 ~~--~~~--~fD~Iv~~~~~~~~~~~~~~~LkpgG~lv  172 (317)
T 1dl5_A          139 VP--EFS--PYDVIFVTVGVDEVPETWFTQLKEGGRVI  172 (317)
T ss_dssp             CG--GGC--CEEEEEECSBBSCCCHHHHHHEEEEEEEE
T ss_pred             cc--cCC--CeEEEEEcCCHHHHHHHHHHhcCCCcEEE
Confidence            10  122  49999988776655 88889999999974

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.28  E-value=0.034  Score=50.08  Aligned_cols=79  Identities=13%  Similarity=0.167  Sum_probs=60.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .+.+|+|.|. |.+|+.+++.++..|..|+++.    .++++.+.+++.|...+ ..+....+.+.+..-.  +.|++|-
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId----~d~~~v~~~~~~g~~vi-~GDat~~~~L~~agi~--~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLD----HDPDHIETLRKFGMKVF-YGDATRMDLLESAGAA--KAEVLIN   74 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEE----CCHHHHHHHHHTTCCCE-ESCTTCHHHHHHTTTT--TCSEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEE----CCHHHHHHHHhCCCeEE-EcCCCCHHHHHhcCCC--ccCEEEE
Confidence            3467999999 9999999999999999999998    68999999998887643 3344333444443222  4899999


Q ss_pred             CCCcccH
Q 023007          268 CVGGNSA  274 (288)
Q Consensus       268 ~~g~~~~  274 (288)
                      ++++...
T Consensus        75 ~~~~~~~   81 (413)
T 3l9w_A           75 AIDDPQT   81 (413)
T ss_dssp             CCSSHHH
T ss_pred             CCCChHH
Confidence            9998664

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.28  E-value=0.037  Score=47.42  Aligned_cols=74  Identities=16%  Similarity=0.027  Sum_probs=51.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHH-HHHhCCCC--EEEeCCcccHHHHHHHhcCCCCc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKE-KLKGLGAD--EVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~-~~~~~g~~--~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      -++++++|+|+ |++|.+++..+...|+ +++++.    .+.++.+ +.++++..  .+++     .+.+.+...   ++
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~n----R~~~ka~~la~~~~~~~~~~~~-----~~~~~~~~~---~a  205 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMAN----RTVEKAERLVREGDERRSAYFS-----LAEAETRLA---EY  205 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEEC----SSHHHHHHHHHHSCSSSCCEEC-----HHHHHHTGG---GC
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHhhhccCceee-----HHHHHhhhc---cC
Confidence            36789999999 9999999999999998 777766    4666654 44566642  1221     233444333   39


Q ss_pred             cEEEECCCccc
Q 023007          263 ALGFNCVGGNS  273 (288)
Q Consensus       263 D~v~d~~g~~~  273 (288)
                      |+||+|++...
T Consensus       206 DivIn~t~~~~  216 (297)
T 2egg_A          206 DIIINTTSVGM  216 (297)
T ss_dssp             SEEEECSCTTC
T ss_pred             CEEEECCCCCC
Confidence            99999998654

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.26  E-value=0.0085  Score=51.89  Aligned_cols=89  Identities=7%  Similarity=0.063  Sum_probs=59.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHH--HcCCeEEEEEcCCCCCHHH--HHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          190 DSIVQNGATSIVGQCIIQIAR--HRGIHSINIIRDRAGSDEA--KEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~--~~g~~vi~~~~~~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      -+|.|+|+ |.+|...+..+.  ..+.+++.+++.   ++++  .+..+++|.....    ..++.+.+.+++. ++|+|
T Consensus         5 irVaIIG~-G~iG~~~~~~l~~~~~~~elvav~d~---~~~~~~~~~a~~~g~~~~~----~~~e~ll~~~~~~-~iDvV   75 (312)
T 1nvm_B            5 LKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGI---DAASDGLARAQRMGVTTTY----AGVEGLIKLPEFA-DIDFV   75 (312)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECS---CTTCHHHHHHHHTTCCEES----SHHHHHHHSGGGG-GEEEE
T ss_pred             CEEEEEcC-cHHHHHHHHHHHhhCcCeEEEEEEeC---ChhhhHHHHHHHcCCCccc----CCHHHHHhccCCC-CCcEE
Confidence            47999996 999998888774  346788888764   3232  4566778865221    2234454433333 39999


Q ss_pred             EECCCcccH-HHHHhhccC--CCee
Q 023007          266 FNCVGGNSA-SKVLKFLRF--REEQ  287 (288)
Q Consensus       266 ~d~~g~~~~-~~a~~~l~~--~G~~  287 (288)
                      |+|++...- +.+.++++.  |.++
T Consensus        76 ~~atp~~~h~~~a~~al~a~~Gk~V  100 (312)
T 1nvm_B           76 FDATSASAHVQNEALLRQAKPGIRL  100 (312)
T ss_dssp             EECSCHHHHHHHHHHHHHHCTTCEE
T ss_pred             EECCChHHHHHHHHHHHHhCCCCEE
Confidence            999996554 777888877  7654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=96.26  E-value=0.0062  Score=52.99  Aligned_cols=81  Identities=9%  Similarity=0.060  Sum_probs=47.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHhCC---CCEEEeCCcccHHHHHHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKGLG---ADEVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      .+.+|||+|++|.+|...++.+...|  .+|++..+...  ....+.++.+.   --.++..+-.+.+.+.++..+. ++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~   99 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTY--SGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-DV   99 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCT--TCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-TC
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccc--ccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-CC
Confidence            45789999999999999999888888  67777664321  11112222221   1122222222234444443332 39


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |+||+|++.
T Consensus       100 d~Vih~A~~  108 (346)
T 4egb_A          100 QVIVNFAAE  108 (346)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999884

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.24  E-value=0.005  Score=49.04  Aligned_cols=94  Identities=16%  Similarity=0.137  Sum_probs=59.9

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCCC-C--EEEeCCcccHHHHHH
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGA-D--EVFTESQLEVKNVKG  254 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g~-~--~v~~~~~~~~~~i~~  254 (288)
                      ..++++++||-.|+ |. |..+..+++..+  .+++++.    .+++..+.++    ..|. .  .++..+.   ..+..
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~l~~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~   88 (197)
T 3eey_A           18 MFVKEGDTVVDATC-GN-GNDTAFLASLVGENGRVFGFD----IQDKAIANTTKKLTDLNLIDRVTLIKDGH---QNMDK   88 (197)
T ss_dssp             HHCCTTCEEEESCC-TT-SHHHHHHHHHHCTTCEEEEEC----SCHHHHHHHHHHHHHTTCGGGEEEECSCG---GGGGG
T ss_pred             hcCCCCCEEEEcCC-CC-CHHHHHHHHHhCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCCeEEEECCH---HHHhh
Confidence            45788999999988 33 788888888864  5777776    5777776664    3443 1  2222221   11211


Q ss_pred             HhcCCCCccEEEECCCc----------------ccHHHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGG----------------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~----------------~~~~~a~~~l~~~G~~v  288 (288)
                      ...+  .+|+|+.+.+-                ..+..+.+.|+++|+++
T Consensus        89 ~~~~--~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~  136 (197)
T 3eey_A           89 YIDC--PVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIIT  136 (197)
T ss_dssp             TCCS--CEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             hccC--CceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEE
Confidence            2222  59998865432                23488889999999874

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=96.20  E-value=0.014  Score=51.63  Aligned_cols=79  Identities=10%  Similarity=0.023  Sum_probs=49.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .+.+|||+|++|.+|...++.+...| .+|+++.+......+...  ..-+. .++..+-.+.+.+.++..   ++|+||
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~--~~~~v-~~~~~Dl~d~~~l~~~~~---~~d~Vi  104 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP--DHPAV-RFSETSITDDALLASLQD---EYDYVF  104 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC--CCTTE-EEECSCTTCHHHHHHCCS---CCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc--CCCce-EEEECCCCCHHHHHHHhh---CCCEEE
Confidence            35789999999999999999998899 999999854321111110  00111 222222223345555544   399999


Q ss_pred             ECCCcc
Q 023007          267 NCVGGN  272 (288)
Q Consensus       267 d~~g~~  272 (288)
                      +|++..
T Consensus       105 h~A~~~  110 (377)
T 2q1s_A          105 HLATYH  110 (377)
T ss_dssp             ECCCCS
T ss_pred             ECCCcc
Confidence            999853

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.20  E-value=0.012  Score=49.18  Aligned_cols=34  Identities=12%  Similarity=0.186  Sum_probs=28.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      +.+|+|.|+ |++|..+++.+...|...+.+++.+
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d   64 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   64 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            378999999 9999999999999999666666543

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.19  E-value=0.017  Score=45.65  Aligned_cols=93  Identities=11%  Similarity=0.043  Sum_probs=55.8

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcC----------CeEEEEEcCCCCCHHHHHHHHhCCCCEEE-eCCccc---H
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRG----------IHSINIIRDRAGSDEAKEKLKGLGADEVF-TESQLE---V  249 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g----------~~vi~~~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~---~  249 (288)
                      ..++++++||-+|+ |. |..+..+++..|          .+++++.-    ++..     .+....++ ..+-..   .
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~----s~~~-----~~~~~~~~~~~d~~~~~~~   86 (196)
T 2nyu_A           18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDL----LHIF-----PLEGATFLCPADVTDPRTS   86 (196)
T ss_dssp             CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECS----SCCC-----CCTTCEEECSCCTTSHHHH
T ss_pred             CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEec----hhcc-----cCCCCeEEEeccCCCHHHH
Confidence            44788999999999 66 889999999986          56776652    3211     01112233 222111   1


Q ss_pred             HHHHHHhcCCCCccEEEE-----CCCcc-------------cHHHHHhhccCCCeeC
Q 023007          250 KNVKGLLANLPEPALGFN-----CVGGN-------------SASKVLKFLRFREEQW  288 (288)
Q Consensus       250 ~~i~~~~~~~g~~D~v~d-----~~g~~-------------~~~~a~~~l~~~G~~v  288 (288)
                      +.+.....+. .+|+|+.     +++..             .+..+.+.|+|+|+|+
T Consensus        87 ~~~~~~~~~~-~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv  142 (196)
T 2nyu_A           87 QRILEVLPGR-RADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFL  142 (196)
T ss_dssp             HHHHHHSGGG-CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             HHHHHhcCCC-CCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence            2233333332 4999994     33432             2366789999999985

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.19  E-value=0.011  Score=51.96  Aligned_cols=34  Identities=18%  Similarity=0.245  Sum_probs=29.7

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +++|||+|++|.+|...++.+...|++|+++.+.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRR   34 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            3689999999999999999888889999998853

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.18  E-value=0.036  Score=45.29  Aligned_cols=99  Identities=15%  Similarity=0.012  Sum_probs=60.5

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHH----hCCCC--EEEeCCcccHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGAD--EVFTESQLEVKNVK  253 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~g~~--~v~~~~~~~~~~i~  253 (288)
                      ...+.+++.+||=+|+  +.|..++.+++.+  +.+++++.    .+++..+.++    ..|..  .+-....+..+.+.
T Consensus        50 ~~~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~  123 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITP--AAGLVGLYILNGLADNTTLTCID----PESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS  123 (221)
T ss_dssp             HHSCCTTCCEEEEEST--THHHHHHHHHHHSCTTSEEEEEC----SCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG
T ss_pred             HhhCCCCCCCEEEEcC--CchHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHH
Confidence            3344455569998887  6788888999976  57887776    5777766553    45543  22111111112222


Q ss_pred             HHhcCCCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      .+..+  .||+||-.....    .++.+.++|+|||.++
T Consensus       124 ~~~~~--~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv  160 (221)
T 3dr5_A          124 RLAND--SYQLVFGQVSPMDLKALVDAAWPLLRRGGALV  160 (221)
T ss_dssp             GSCTT--CEEEEEECCCTTTHHHHHHHHHHHEEEEEEEE
T ss_pred             HhcCC--CcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEE
Confidence            22122  599988654332    2378889999999875

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.18  E-value=0.019  Score=49.54  Aligned_cols=83  Identities=16%  Similarity=0.115  Sum_probs=57.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++|.|+|. |.+|...++.++..|++|++...    +.++ +...++|++. .     ..+.+..      +.|+|+.
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~----~~~~-~~~~~~g~~~-~-----~l~ell~------~aDvV~l  202 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDP----YPNE-ERAKEVNGKF-V-----DLETLLK------ESDVVTI  202 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS----SCCH-HHHHHTTCEE-C-----CHHHHHH------HCSEEEE
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECC----CCCh-hhHhhcCccc-c-----CHHHHHh------hCCEEEE
Confidence            5789999999 99999999999999999988874    3333 3455677632 1     1222222      2888888


Q ss_pred             CCCccc-----H-HHHHhhccCCCeeC
Q 023007          268 CVGGNS-----A-SKVLKFLRFREEQW  288 (288)
Q Consensus       268 ~~g~~~-----~-~~a~~~l~~~G~~v  288 (288)
                      |+....     + ...++.++++..++
T Consensus       203 ~~p~~~~t~~li~~~~l~~mk~ga~li  229 (307)
T 1wwk_A          203 HVPLVESTYHLINEERLKLMKKTAILI  229 (307)
T ss_dssp             CCCCSTTTTTCBCHHHHHHSCTTCEEE
T ss_pred             ecCCChHHhhhcCHHHHhcCCCCeEEE
Confidence            876422     2 45677888877653

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.15  E-value=0.012  Score=49.07  Aligned_cols=98  Identities=16%  Similarity=0.118  Sum_probs=60.3

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccH-HHHHHHh
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEV-KNVKGLL  256 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~-~~i~~~~  256 (288)
                      ....++++||-+|+  +.|..++.+++..  +.+++++.    .+++..+.++    ..|...-+.....+. +.+..+.
T Consensus        59 ~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~  132 (248)
T 3tfw_A           59 VRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLE----ADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG  132 (248)
T ss_dssp             HHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEE----CCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC
T ss_pred             HhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC
Confidence            34567899999998  3488888888887  46787776    5777776664    346431111111122 2233332


Q ss_pred             cCCCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          257 ANLPEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      . .+.+|+||-.....    .++.+.++|+|||.++
T Consensus       133 ~-~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv  167 (248)
T 3tfw_A          133 E-CPAFDLIFIDADKPNNPHYLRWALRYSRPGTLII  167 (248)
T ss_dssp             S-CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEE
T ss_pred             C-CCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEE
Confidence            2 12499988433322    2377889999999875

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.14  E-value=0.018  Score=47.00  Aligned_cols=92  Identities=13%  Similarity=0.051  Sum_probs=61.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcC-------CeEEEEEcCCCCCHHHHHHHHh----CC-------CCEEEeCCc
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRG-------IHSINIIRDRAGSDEAKEKLKG----LG-------ADEVFTESQ  246 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g-------~~vi~~~~~~~~~~~~~~~~~~----~g-------~~~v~~~~~  246 (288)
                      .++++++||-+|+ |. |..+..+++..+       .+++++.    .+++..+.+++    .+       .-.++..+.
T Consensus        81 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~  154 (227)
T 1r18_A           81 HLKPGARILDVGS-GS-GYLTACFYRYIKAKGVDADTRIVGIE----HQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG  154 (227)
T ss_dssp             TCCTTCEEEEESC-TT-SHHHHHHHHHHHHSCCCTTCEEEEEE----SCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG
T ss_pred             hCCCCCEEEEECC-Cc-cHHHHHHHHhcccccCCccCEEEEEE----cCHHHHHHHHHHHHhcCccccCCCceEEEECCc
Confidence            5789999999998 44 888888888776       4788876    57777766543    11       112222211


Q ss_pred             ccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          247 LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       247 ~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      ..     .+... +.+|+|+.+..-... ..+.+.|+++|+++
T Consensus       155 ~~-----~~~~~-~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv  191 (227)
T 1r18_A          155 RK-----GYPPN-APYNAIHVGAAAPDTPTELINQLASGGRLI  191 (227)
T ss_dssp             GG-----CCGGG-CSEEEEEECSCBSSCCHHHHHTEEEEEEEE
T ss_pred             cc-----CCCcC-CCccEEEECCchHHHHHHHHHHhcCCCEEE
Confidence            10     11111 149999988776665 88999999999975

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.14  E-value=0.02  Score=48.42  Aligned_cols=65  Identities=18%  Similarity=0.213  Sum_probs=44.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      +++++|+|+ |++|.+++..+...|.+++++.+    +.++.+.+.+++.. .....+.         .   .+|+||+|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nR----t~~ka~~la~~~~~-~~~~~~l---------~---~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNR----SSRGLDFFQRLGCD-CFMEPPK---------S---AFDLIINA  179 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS----SCTTHHHHHHHTCE-EESSCCS---------S---CCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC----CHHHHHHHHHCCCe-EecHHHh---------c---cCCEEEEc
Confidence            899999999 99999999999999988888875    34444333355532 2222111         0   27888887


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      ++.
T Consensus       180 Tp~  182 (269)
T 3phh_A          180 TSA  182 (269)
T ss_dssp             CTT
T ss_pred             ccC
Confidence            653

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.13  E-value=0.03  Score=47.29  Aligned_cols=94  Identities=10%  Similarity=0.055  Sum_probs=62.2

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCCC---EEEeCCcccHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGAD---EVFTESQLEVKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~i  252 (288)
                      +.....++++.+||-+|+ | .|..+..+++..|++++++.    .+++..+.+++    .|..   .++..+.      
T Consensus        56 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~v~gvd----~s~~~~~~a~~~~~~~~~~~~~~~~~~d~------  123 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGC-G-WGATMMRAVEKYDVNVVGLT----LSKNQANHVQQLVANSENLRSKRVLLAGW------  123 (287)
T ss_dssp             HHTTTTCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHTCCCCSCEEEEESCG------
T ss_pred             HHHHcCCCCcCEEEEECC-c-ccHHHHHHHHHcCCEEEEEE----CCHHHHHHHHHHHHhcCCCCCeEEEECCh------
Confidence            344456789999999998 3 47888889988899998887    57887776653    3321   1222111      


Q ss_pred             HHHhcCCCCccEEEEC-----CCc----ccHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNC-----VGG----NSASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~-----~g~----~~~~~a~~~l~~~G~~v  288 (288)
                      ..+. +  .+|+|+..     .+.    ..+..+.++|+|+|+++
T Consensus       124 ~~~~-~--~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~  165 (287)
T 1kpg_A          124 EQFD-E--PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVML  165 (287)
T ss_dssp             GGCC-C--CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEE
T ss_pred             hhCC-C--CeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEE
Confidence            1122 2  59999875     221    22377789999999974

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=96.13  E-value=0.022  Score=54.81  Aligned_cols=83  Identities=7%  Similarity=0.059  Sum_probs=51.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH---hCCCCEEEeCCcccHHHHHHHhcCCCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK---GLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      .+++|||+|++|.+|...++.+...|++|+++.+......+..+.++   .-+...+ ..+-.+.+.+.++....+ +|+
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v-~~Dl~d~~~l~~~~~~~~-~D~   87 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFY-EVDLCDRKGLEKVFKEYK-IDS   87 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEE-ECCTTCHHHHHHHHHHSC-CCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEE-EcCCCCHHHHHHHHHhCC-CCE
Confidence            46799999999999999999888889999998864322222222222   2233322 122122234444333223 999


Q ss_pred             EEECCCcc
Q 023007          265 GFNCVGGN  272 (288)
Q Consensus       265 v~d~~g~~  272 (288)
                      ||+|++..
T Consensus        88 Vih~A~~~   95 (699)
T 1z45_A           88 VIHFAGLK   95 (699)
T ss_dssp             EEECCSCC
T ss_pred             EEECCccc
Confidence            99999853

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.11  E-value=0.0087  Score=51.40  Aligned_cols=76  Identities=11%  Similarity=0.262  Sum_probs=47.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      -++..+|||+|++|.+|...++.+...|++|+++.+....     +.   ++.. ++..+-.+.+.+.++..+. ++|+|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~---l~~~-~~~~Dl~d~~~~~~~~~~~-~~d~v   78 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-----KL---PNVE-MISLDIMDSQRVKKVISDI-KPDYI   78 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-----CC---TTEE-EEECCTTCHHHHHHHHHHH-CCSEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-----cc---ceee-EEECCCCCHHHHHHHHHhc-CCCEE
Confidence            4566899999999999999999988899999999864321     11   2322 2222212233444433321 49999


Q ss_pred             EECCCc
Q 023007          266 FNCVGG  271 (288)
Q Consensus       266 ~d~~g~  271 (288)
                      |+|.+.
T Consensus        79 ih~A~~   84 (321)
T 2pk3_A           79 FHLAAK   84 (321)
T ss_dssp             EECCSC
T ss_pred             EEcCcc
Confidence            999885

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.06  E-value=0.019  Score=49.64  Aligned_cols=34  Identities=26%  Similarity=0.177  Sum_probs=29.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~  221 (288)
                      -.+++++|+|+ |+.|.+++..+...|+ +++++.+
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nR  180 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNR  180 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEEC
Confidence            36789999999 9999999999999999 6777764

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.05  E-value=0.04  Score=45.97  Aligned_cols=119  Identities=13%  Similarity=0.068  Sum_probs=64.6

Q ss_pred             CcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007          152 SVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE  231 (288)
Q Consensus       152 ~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  231 (288)
                      ...+.+++++.+.....-.  .......+...  ++++++||-.|+ |. |..++.+++ .|++++++.    .++...+
T Consensus        88 ~~~~~l~p~~~fgtg~~~t--t~~~~~~l~~~--~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvD----i~~~~v~  156 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHHET--TRLALKALARH--LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVD----IDPMVLP  156 (254)
T ss_dssp             SEEEECCCC-----CCSHH--HHHHHHHHHHH--CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEE----SCGGGHH
T ss_pred             ceEEEECCCccccCCCCHH--HHHHHHHHHHh--cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEE----CCHHHHH
Confidence            4455666665544322111  01122333332  678899999998 44 777777666 577888876    4666665


Q ss_pred             HHH----hCCCC-EEEeCCcccHHHHHHHhcCCCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          232 KLK----GLGAD-EVFTESQLEVKNVKGLLANLPEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       232 ~~~----~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      .++    ..+.. .++..   +....  +..+  .+|+|+.+.-.+    .+..+.++|+|+|+++
T Consensus       157 ~a~~n~~~~~~~v~~~~~---d~~~~--~~~~--~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~li  215 (254)
T 2nxc_A          157 QAEANAKRNGVRPRFLEG---SLEAA--LPFG--PFDLLVANLYAELHAALAPRYREALVPGGRAL  215 (254)
T ss_dssp             HHHHHHHHTTCCCEEEES---CHHHH--GGGC--CEEEEEEECCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             HHHHHHHHcCCcEEEEEC---Chhhc--CcCC--CCCEEEECCcHHHHHHHHHHHHHHcCCCCEEE
Confidence            554    34543 22211   11111  2233  499998765322    2367788999999874

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.05  E-value=0.009  Score=49.39  Aligned_cols=33  Identities=24%  Similarity=0.346  Sum_probs=29.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++|||+|++|.+|...+..+...|++|+++.+.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~   34 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRG   34 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            479999999999999999888899999999854

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.04  E-value=0.1  Score=39.69  Aligned_cols=79  Identities=18%  Similarity=0.154  Sum_probs=52.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH---hCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK---GLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      .++++|.|+ |.+|...++.+...|.+|+++.+.   .+++.+.++   ..|.. ++..+..+.+.+.+..-.  +.|+|
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~---~~~~~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~--~ad~v   75 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNL---PEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGID--RCRAI   75 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECC---CHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTT--TCSEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECC---ChHHHHHHHHhhcCCCe-EEEcCCCCHHHHHHcChh--hCCEE
Confidence            467999998 999999999999999999999831   245444443   23433 443333333444443112  49999


Q ss_pred             EECCCcccH
Q 023007          266 FNCVGGNSA  274 (288)
Q Consensus       266 ~d~~g~~~~  274 (288)
                      +-+++++..
T Consensus        76 i~~~~~d~~   84 (153)
T 1id1_A           76 LALSDNDAD   84 (153)
T ss_dssp             EECSSCHHH
T ss_pred             EEecCChHH
Confidence            999988655

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.02  E-value=0.011  Score=46.46  Aligned_cols=93  Identities=14%  Similarity=0.108  Sum_probs=59.3

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCE--EEeCCcccHHHHHHHhc
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADE--VFTESQLEVKNVKGLLA  257 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~i~~~~~  257 (288)
                      ..+++|++||=.|+  +.|..+..+++. +.+|+++.    .+++..+.++    +.+.+.  ++...   .+.+....+
T Consensus        18 ~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD----~s~~~l~~a~~~~~~~~~~~v~~~~~~---~~~l~~~~~   87 (185)
T 3mti_A           18 EVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFD----VQEQALGKTSQRLSDLGIENTELILDG---HENLDHYVR   87 (185)
T ss_dssp             TTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEE----SCHHHHHHHHHHHHHHTCCCEEEEESC---GGGGGGTCC
T ss_pred             HhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEE----CCHHHHHHHHHHHHHcCCCcEEEEeCc---HHHHHhhcc
Confidence            46789999998888  347788888887 88999997    5787776664    334332  22211   112222222


Q ss_pred             CCCCccEEEECCCc----------------ccHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGG----------------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~----------------~~~~~a~~~l~~~G~~v  288 (288)
                      +  .+|+|+-+.+-                ..+..+.+.|+|||+++
T Consensus        88 ~--~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~  132 (185)
T 3mti_A           88 E--PIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLA  132 (185)
T ss_dssp             S--CEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             C--CcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEE
Confidence            2  49998765321                11266778999999874

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.02  E-value=0.06  Score=45.40  Aligned_cols=74  Identities=12%  Similarity=0.002  Sum_probs=49.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCC-EEEeCCcccHHHHHHHhcCCCCccE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGAD-EVFTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      -++++++|+|+ |++|.+++..+...|++|+++.    .+.++.+ ..++++.. .+ +..+  .+.+   ..  +++|+
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~----R~~~~~~~la~~~~~~~~~-~~~~--~~~~---~~--~~~Di  183 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITN----RTVSRAEELAKLFAHTGSI-QALS--MDEL---EG--HEFDL  183 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SSHHHHHHHHHHTGGGSSE-EECC--SGGG---TT--CCCSE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEE----CCHHHHHHHHHHhhccCCe-eEec--HHHh---cc--CCCCE
Confidence            36789999999 8999999999999999888876    4666654 44555431 11 1111  1111   11  24999


Q ss_pred             EEECCCccc
Q 023007          265 GFNCVGGNS  273 (288)
Q Consensus       265 v~d~~g~~~  273 (288)
                      +|+|++...
T Consensus       184 vVn~t~~~~  192 (271)
T 1nyt_A          184 IINATSSGI  192 (271)
T ss_dssp             EEECCSCGG
T ss_pred             EEECCCCCC
Confidence            999998654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.01  E-value=0.021  Score=48.39  Aligned_cols=53  Identities=19%  Similarity=0.240  Sum_probs=39.2

Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .+|+....++..+.....--.|++++|.|.++.+|..++.++...|++|+++-
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~h  192 (285)
T 3l07_A          140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCH  192 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEe
Confidence            34433344445555544445899999999977799999999999999987664

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.00  E-value=0.025  Score=47.99  Aligned_cols=53  Identities=19%  Similarity=0.081  Sum_probs=40.0

Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .+|+....++..+.....--.|++++|.|.++.+|..++.++...|++|+++-
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~h  192 (286)
T 4a5o_A          140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTH  192 (286)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEe
Confidence            34433344455555544445899999999977899999999999999998875

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=96.00  E-value=0.022  Score=49.22  Aligned_cols=78  Identities=15%  Similarity=0.149  Sum_probs=47.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCC-CCHHHHHHHHhC--CCC-EEEeCCcccHHHHHHHhcCCCCc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRA-GSDEAKEKLKGL--GAD-EVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~-~~~~~~~~~~~~--g~~-~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      +.+|||+|++|.+|...++.+...|  ++|+++.+... .+.+.   ++++  +.. .++..+-.+.+.+.++..   ++
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~   76 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN---LKDLEDDPRYTFVKGDVADYELVKELVR---KV   76 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---GTTTTTCTTEEEEECCTTCHHHHHHHHH---TC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH---HhhhccCCceEEEEcCCCCHHHHHHHhh---CC
Confidence            3579999999999999888887776  89998875321 11122   2222  111 222222222344545443   39


Q ss_pred             cEEEECCCcc
Q 023007          263 ALGFNCVGGN  272 (288)
Q Consensus       263 D~v~d~~g~~  272 (288)
                      |+||+|.|..
T Consensus        77 d~vih~A~~~   86 (336)
T 2hun_A           77 DGVVHLAAES   86 (336)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCc
Confidence            9999999853

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=96.00  E-value=0.021  Score=52.37  Aligned_cols=37  Identities=19%  Similarity=0.274  Sum_probs=32.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHc---CCeEEEEEcC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHR---GIHSINIIRD  222 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~---g~~vi~~~~~  222 (288)
                      ..++++|||+|++|.+|...++.+...   |.+|+++++.
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~  109 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRA  109 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECC
Confidence            456789999999999999988777777   8999999965

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.98  E-value=0.033  Score=49.17  Aligned_cols=76  Identities=13%  Similarity=0.051  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .+.+|||+|++|.+|...++.+...|++|+++.+......    .....+.. ++..+-.+.+.+.++..   ++|+||+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~v~-~~~~Dl~d~~~~~~~~~---~~d~Vih   99 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM----TEDMFCDE-FHLVDLRVMENCLKVTE---GVDHVFN   99 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS----CGGGTCSE-EEECCTTSHHHHHHHHT---TCSEEEE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccch----hhccCCce-EEECCCCCHHHHHHHhC---CCCEEEE
Confidence            3578999999999999999988888999999986532111    11112222 22222222345555554   3999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      |.+.
T Consensus       100 ~A~~  103 (379)
T 2c5a_A          100 LAAD  103 (379)
T ss_dssp             CCCC
T ss_pred             Ccee
Confidence            9874

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.97  E-value=0.016  Score=51.34  Aligned_cols=86  Identities=13%  Similarity=0.069  Sum_probs=58.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      -.|++|.|+|. |.+|...++.++.+|++ |++..+    +....+...++|+..+    . ..+.+.   .   ..|+|
T Consensus       162 l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~----~~~~~~~~~~~g~~~~----~-~l~ell---~---~aDvV  225 (364)
T 2j6i_A          162 IEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDY----QALPKDAEEKVGARRV----E-NIEELV---A---QADIV  225 (364)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECS----SCCCHHHHHHTTEEEC----S-SHHHHH---H---TCSEE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECC----CccchhHHHhcCcEec----C-CHHHHH---h---cCCEE
Confidence            36789999999 99999999999999997 888763    3323344556674321    1 122322   2   38999


Q ss_pred             EECCCcc-----cH-HHHHhhccCCCeeC
Q 023007          266 FNCVGGN-----SA-SKVLKFLRFREEQW  288 (288)
Q Consensus       266 ~d~~g~~-----~~-~~a~~~l~~~G~~v  288 (288)
                      +.|+...     .+ ...++.|++++.|+
T Consensus       226 ~l~~P~t~~t~~li~~~~l~~mk~ga~lI  254 (364)
T 2j6i_A          226 TVNAPLHAGTKGLINKELLSKFKKGAWLV  254 (364)
T ss_dssp             EECCCCSTTTTTCBCHHHHTTSCTTEEEE
T ss_pred             EECCCCChHHHHHhCHHHHhhCCCCCEEE
Confidence            9988753     23 56778888877653

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.97  E-value=0.031  Score=54.68  Aligned_cols=86  Identities=15%  Similarity=0.245  Sum_probs=53.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHH-HcCCe-EEEEEcCCC---CCHHHHHHHHhCCCCEEEeC-Cc---ccHHHHHHHh
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIAR-HRGIH-SINIIRDRA---GSDEAKEKLKGLGADEVFTE-SQ---LEVKNVKGLL  256 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~-~~g~~-vi~~~~~~~---~~~~~~~~~~~~g~~~v~~~-~~---~~~~~i~~~~  256 (288)
                      +.++++++|+|++|++|.+.++.+. ..|++ ++.+.+...   ..++..+.+++.|....+.. +-   ..++.+.+..
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            4678999999999999999887776 78996 666665421   12233445566776533221 11   2233333322


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ....++|++|++.|.
T Consensus       607 ~~~~~id~lVnnAGv  621 (795)
T 3slk_A          607 PDEHPLTAVVHAAGV  621 (795)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HHhCCCEEEEECCCc
Confidence            222249999999885

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.95  E-value=0.046  Score=44.32  Aligned_cols=77  Identities=9%  Similarity=0.049  Sum_probs=55.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|+|.|+ |.+|...++.+...|.+++++.    .++++.+.+. ..+.. ++..+..+.+.+.+..-.  +.|+++-++
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid----~~~~~~~~l~~~~~~~-~i~gd~~~~~~l~~a~i~--~ad~vi~~~   73 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIIN----KDRELCEEFAKKLKAT-IIHGDGSHKEILRDAEVS--KNDVVVILT   73 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEE----SCHHHHHHHHHHSSSE-EEESCTTSHHHHHHHTCC--TTCEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEE----CCHHHHHHHHHHcCCe-EEEcCCCCHHHHHhcCcc--cCCEEEEec
Confidence            5899998 9999999999999999999998    5788877654 46654 444444333444443222  499999999


Q ss_pred             CcccHH
Q 023007          270 GGNSAS  275 (288)
Q Consensus       270 g~~~~~  275 (288)
                      +.+..+
T Consensus        74 ~~d~~n   79 (218)
T 3l4b_C           74 PRDEVN   79 (218)
T ss_dssp             SCHHHH
T ss_pred             CCcHHH
Confidence            987653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=95.95  E-value=0.011  Score=50.48  Aligned_cols=75  Identities=12%  Similarity=0.040  Sum_probs=47.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +.+|||+|++|.+|...++.+...  |.+|+++.+.....    +...  +... +..+-.+.+.+.+.....+ +|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----~~~~--~~~~-~~~D~~d~~~~~~~~~~~~-~d~vi   73 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT----DVVN--SGPF-EVVNALDFNQIEHLVEVHK-ITDIY   73 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC----HHHH--SSCE-EECCTTCHHHHHHHHHHTT-CCEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc----cccC--CCce-EEecCCCHHHHHHHHhhcC-CCEEE
Confidence            367999999999999988888777  89999998643221    1222  2222 2222222334444443223 99999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      +|.+.
T Consensus        74 h~a~~   78 (312)
T 2yy7_A           74 LMAAL   78 (312)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99985

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=95.91  E-value=0.046  Score=48.43  Aligned_cols=36  Identities=8%  Similarity=0.087  Sum_probs=29.5

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      -+.+.+|||+|++|.+|...+..+...|++|+++.+
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r   43 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDN   43 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEe
Confidence            456789999999999999999888888999999873

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.90  E-value=0.022  Score=44.52  Aligned_cols=97  Identities=15%  Similarity=0.111  Sum_probs=60.5

Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCC-CEEEeCCcccHHHHHHH
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGA-DEVFTESQLEVKNVKGL  255 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~i~~~  255 (288)
                      .....+.++++||-.|+ |. |..+..+++.. .+++++.    .+++..+.+++    .+. ..+.. ...+...  .+
T Consensus        26 ~~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D----~~~~~~~~a~~~~~~~~~~~~~~~-~~~d~~~--~~   95 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAID----RNPEAISTTEMNLQRHGLGDNVTL-MEGDAPE--AL   95 (192)
T ss_dssp             HHHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEE----SCHHHHHHHHHHHHHTTCCTTEEE-EESCHHH--HH
T ss_pred             HHhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEE----CCHHHHHHHHHHHHHcCCCcceEE-EecCHHH--hc
Confidence            34457889999999998 44 77777887766 7888776    57777766643    444 21111 1111111  12


Q ss_pred             hcCCCCccEEEECCCc----ccHHHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGG----NSASKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~----~~~~~a~~~l~~~G~~v  288 (288)
                      .. .+.+|+|+.+...    ..+..+.+.|+++|+++
T Consensus        96 ~~-~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~  131 (192)
T 1l3i_A           96 CK-IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRII  131 (192)
T ss_dssp             TT-SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEE
T ss_pred             cc-CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEE
Confidence            11 1149999976542    22377788999999874

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.86  E-value=0.037  Score=47.31  Aligned_cols=52  Identities=13%  Similarity=0.127  Sum_probs=39.8

Q ss_pred             cccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       169 l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      +|+....++..+.....--.|++++|.|.++.+|..++.++...|++|+++-
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~  196 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVH  196 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence            3433444455555555556899999999977799999999999999988775

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=95.83  E-value=0.023  Score=49.12  Aligned_cols=34  Identities=18%  Similarity=0.339  Sum_probs=30.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +++|||+|++|.+|...++.+...|++|+++++.
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~   42 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRD   42 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcC
Confidence            6899999999999999999988899999988864

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=95.82  E-value=0.035  Score=47.72  Aligned_cols=77  Identities=12%  Similarity=0.255  Sum_probs=47.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      .+|||+|++|.+|...++.+...|.+|+++.+......+.   +.. +. .++..+-.+.+.+.++.... ++|+||+|.
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~-~~-~~~~~D~~~~~~~~~~~~~~-~~d~vih~a   75 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDA---ITE-GA-KFYNGDLRDKAFLRDVFTQE-NIEAVMHFA   75 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCT-TS-EEEECCTTCHHHHHHHHHHS-CEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhh---cCC-Cc-EEEECCCCCHHHHHHHHhhc-CCCEEEECC
Confidence            4799999999999999999988999999988543221111   111 22 22222222233444433312 399999999


Q ss_pred             Ccc
Q 023007          270 GGN  272 (288)
Q Consensus       270 g~~  272 (288)
                      +..
T Consensus        76 ~~~   78 (330)
T 2c20_A           76 ADS   78 (330)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            853

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.81  E-value=0.032  Score=45.48  Aligned_cols=96  Identities=11%  Similarity=0.013  Sum_probs=63.0

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC----CCCEEEeCCcccHHHHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL----GADEVFTESQLEVKNVKGL  255 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~i~~~  255 (288)
                      +.....+.++++||-+|+ |. |..+..+++. +.+++++.    .+++..+.+++.    +.-.++..+...  ...  
T Consensus        62 ~~~~~~~~~~~~vLdiG~-G~-G~~~~~l~~~-~~~v~~vD----~~~~~~~~a~~~~~~~~~v~~~~~d~~~--~~~--  130 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGT-GI-GYYTALIAEI-VDKVVSVE----INEKMYNYASKLLSYYNNIKLILGDGTL--GYE--  130 (231)
T ss_dssp             HHHHTTCCTTCEEEEECC-TT-SHHHHHHHHH-SSEEEEEE----SCHHHHHHHHHHHTTCSSEEEEESCGGG--CCG--
T ss_pred             HHHhcCCCCCCEEEEEcC-CC-CHHHHHHHHH-cCEEEEEe----CCHHHHHHHHHHHhhcCCeEEEECCccc--ccc--
Confidence            334467889999999998 43 7788888876 47888887    578887777542    211222222111  000  


Q ss_pred             hcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      ..+  .+|+|+.+..-... +.+.+.|+|+|+++
T Consensus       131 ~~~--~fD~v~~~~~~~~~~~~~~~~L~pgG~l~  162 (231)
T 1vbf_A          131 EEK--PYDRVVVWATAPTLLCKPYEQLKEGGIMI  162 (231)
T ss_dssp             GGC--CEEEEEESSBBSSCCHHHHHTEEEEEEEE
T ss_pred             cCC--CccEEEECCcHHHHHHHHHHHcCCCcEEE
Confidence            122  49999987665555 88899999999874

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=95.80  E-value=0.017  Score=47.03  Aligned_cols=98  Identities=12%  Similarity=0.053  Sum_probs=60.7

Q ss_pred             hcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCcccHHHHH
Q 023007          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNVK  253 (288)
Q Consensus       183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~i~  253 (288)
                      .....++++||-+|+ | .|..++.+++..  +.+++++.    .+++..+.++    ..|..   .++..+.  .+.+.
T Consensus        64 l~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~g~~~~i~~~~~d~--~~~~~  135 (229)
T 2avd_A           64 LARLIQAKKALDLGT-F-TGYSALALALALPADGRVVTCE----VDAQPPELGRPLWRQAEAEHKIDLRLKPA--LETLD  135 (229)
T ss_dssp             HHHHTTCCEEEEECC-T-TSHHHHHHHTTSCTTCEEEEEE----SCSHHHHHHHHHHHHTTCTTTEEEEESCH--HHHHH
T ss_pred             HHHhcCCCEEEEEcC-C-ccHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHCCCCCeEEEEEcCH--HHHHH
Confidence            344567889999998 4 788888898876  46777776    4666665554    34542   2222221  22333


Q ss_pred             HHhcCC--CCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          254 GLLANL--PEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~--g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      .+....  +.+|+|+-.....    .+..+.++|+++|.++
T Consensus       136 ~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv  176 (229)
T 2avd_A          136 ELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILA  176 (229)
T ss_dssp             HHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEE
T ss_pred             HHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            333210  1499987654332    2488889999999874

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.80  E-value=0.0088  Score=51.28  Aligned_cols=33  Identities=15%  Similarity=0.302  Sum_probs=29.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +++|||+|++|.+|...++.+...|++|+++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r   34 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGF   34 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEcc
Confidence            468999999999999999998889999999874

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.77  E-value=0.043  Score=44.40  Aligned_cols=99  Identities=14%  Similarity=0.110  Sum_probs=61.4

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHH----hCCCCE---EEeCCcccHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGADE---VFTESQLEVKNV  252 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~g~~~---v~~~~~~~~~~i  252 (288)
                      ......++++||=+|+  +.|..++.+++..  +.+++++.    .+++..+.++    ..|...   ++....  .+.+
T Consensus        52 ~l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~  123 (223)
T 3duw_A           52 LLVQIQGARNILEIGT--LGGYSTIWLARGLSSGGRVVTLE----ASEKHADIARSNIERANLNDRVEVRTGLA--LDSL  123 (223)
T ss_dssp             HHHHHHTCSEEEEECC--TTSHHHHHHHTTCCSSCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEESCH--HHHH
T ss_pred             HHHHhhCCCEEEEecC--CccHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCH--HHHH
Confidence            3344567889999988  4678888888887  57888887    5777766553    456432   222221  1223


Q ss_pred             HHHhcCC-CCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          253 KGLLANL-PEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~-g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      ..+.... +.+|+||-.....    .+..+.+.|+|+|.++
T Consensus       124 ~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv  164 (223)
T 3duw_A          124 QQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVII  164 (223)
T ss_dssp             HHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEE
T ss_pred             HHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEE
Confidence            3332211 2499988544332    2377789999999874

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.77  E-value=0.034  Score=46.91  Aligned_cols=51  Identities=8%  Similarity=0.180  Sum_probs=39.3

Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .+|+.....+..+....  -.|++++|.|.++.+|..++.++...|++|+++-
T Consensus       131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~  181 (276)
T 3ngx_A          131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCH  181 (276)
T ss_dssp             SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEe
Confidence            34434444555566554  6889999999977899999999999999998775

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.77  E-value=0.11  Score=44.26  Aligned_cols=43  Identities=23%  Similarity=0.152  Sum_probs=33.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHH
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~  233 (288)
                      --.+++++|+|+ |++|.+++..+...|+ +++++.    ++.++.+.+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~----R~~~~a~~l  167 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVAD----LDTSRAQAL  167 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SSHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEE----CCHHHHHHH
Confidence            346789999999 9999999999999999 576666    456665533

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.77  E-value=0.027  Score=47.81  Aligned_cols=52  Identities=21%  Similarity=0.322  Sum_probs=38.9

Q ss_pred             cccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       169 l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      +|+....++..+.....--.|++++|.|.++.+|..++.++...|++|+++-
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h  191 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCH  191 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence            3433333444555544456899999999977799999999999999988775

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.76  E-value=0.057  Score=43.78  Aligned_cols=92  Identities=12%  Similarity=-0.003  Sum_probs=60.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHh----CC-----CC--EEEeCCcccHHH
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKG----LG-----AD--EVFTESQLEVKN  251 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~----~g-----~~--~v~~~~~~~~~~  251 (288)
                      .++++++||-.|+ | .|..+..+++..|  .+++++.    .+++..+.+++    .+     .+  .++..+...   
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~---  144 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGID----HIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM---  144 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEE----SCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG---
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEe----CCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc---
Confidence            4788999999998 4 3888888888876  5788776    57777766642    22     11  222221110   


Q ss_pred             HHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          252 VKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      .. ...+  .+|+|+....-..+ ..+.++|+|+|+++
T Consensus       145 ~~-~~~~--~fD~i~~~~~~~~~~~~~~~~LkpgG~lv  179 (226)
T 1i1n_A          145 GY-AEEA--PYDAIHVGAAAPVVPQALIDQLKPGGRLI  179 (226)
T ss_dssp             CC-GGGC--CEEEEEECSBBSSCCHHHHHTEEEEEEEE
T ss_pred             Cc-ccCC--CcCEEEECCchHHHHHHHHHhcCCCcEEE
Confidence            00 0122  49999877665554 88999999999975

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=95.75  E-value=0.021  Score=46.95  Aligned_cols=99  Identities=17%  Similarity=0.087  Sum_probs=60.6

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHh----CCCCE-EEeCCcccHHHHHHHh
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKG----LGADE-VFTESQLEVKNVKGLL  256 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~i~~~~  256 (288)
                      ....++++||-+|+ | .|..++.+++..  +.+++++.    .+++..+.+++    .|... +-.......+.+..+.
T Consensus        68 ~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~~v~~iD----~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~  141 (232)
T 3cbg_A           68 ISLTGAKQVLEIGV-F-RGYSALAMALQLPPDGQIIACD----QDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLT  141 (232)
T ss_dssp             HHHHTCCEEEEECC-T-TSHHHHHHHTTSCTTCEEEEEE----SCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH
T ss_pred             HHhcCCCEEEEecC-C-CCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence            34456789999998 3 788888999876  46787776    57777766643    34421 1111111122334443


Q ss_pred             cCC--CCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          257 ANL--PEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~--g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      ...  +.+|+||-.....    .+..+.++|+|+|.++
T Consensus       142 ~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv  179 (232)
T 3cbg_A          142 QGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMV  179 (232)
T ss_dssp             TSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred             hcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            211  2599988443322    2478889999999874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.73  E-value=0.02  Score=47.27  Aligned_cols=74  Identities=15%  Similarity=0.152  Sum_probs=45.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC--c-ccHHHHHHHhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES--Q-LEVKNVKGLLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~--~-~~~~~i~~~~~~~g~~D  263 (288)
                      ++++++|+|+++++|.+.++.+.. .|++|+.+.+......+         .-..+.-+  + ..++.+.+... .+++|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~---------~~~~~~~Dv~~~~~v~~~~~~~~-~~~id   72 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE---------NLKFIKADLTKQQDITNVLDIIK-NVSFD   72 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT---------TEEEEECCTTCHHHHHHHHHHTT-TCCEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc---------cceEEecCcCCHHHHHHHHHHHH-hCCCC
Confidence            568999999999999998876665 78888887643211111         00222211  1 22333333333 33599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|++.|.
T Consensus        73 ~lv~nAg~   80 (244)
T 4e4y_A           73 GIFLNAGI   80 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999985

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.73  E-value=0.017  Score=50.02  Aligned_cols=73  Identities=8%  Similarity=-0.026  Sum_probs=45.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-EeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +|||+|++|.+|...++.+... |++|+++.+.    .++.+.+ ...+...+ .|-.+. .+.+.+...+   +|+||+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~----~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~---~d~vih   73 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIG----SDAISRFLNHPHFHFVEGDISIH-SEWIEYHVKK---CDVVLP   73 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC----CGGGGGGTTCTTEEEEECCTTTC-SHHHHHHHHH---CSEEEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCC----cchHHHhhcCCCeEEEeccccCc-HHHHHhhccC---CCEEEE
Confidence            6999999999999999888887 8999999853    3322211 11122222 122211 1233333332   999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      |.+.
T Consensus        74 ~A~~   77 (345)
T 2bll_A           74 LVAI   77 (345)
T ss_dssp             CBCC
T ss_pred             cccc
Confidence            9874

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=95.73  E-value=0.037  Score=47.78  Aligned_cols=79  Identities=6%  Similarity=-0.021  Sum_probs=47.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc---C---CeEEEEEcCCC-CCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          191 SIVQNGATSIVGQCIIQIARHR---G---IHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~---g---~~vi~~~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      +|||+|++|.+|...++.+...   |   .+|+++.+... .+.++.+.+..-.--.++..+-.+.+.+.++..   ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d   78 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR---GVD   78 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT---TCC
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc---CCC
Confidence            6999999999999988888775   7   89999885421 122222111110111222222223345555553   399


Q ss_pred             EEEECCCcc
Q 023007          264 LGFNCVGGN  272 (288)
Q Consensus       264 ~v~d~~g~~  272 (288)
                      +||+|.+..
T Consensus        79 ~Vih~A~~~   87 (337)
T 1r6d_A           79 AIVHFAAES   87 (337)
T ss_dssp             EEEECCSCC
T ss_pred             EEEECCCcc
Confidence            999999853

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=95.73  E-value=0.021  Score=49.57  Aligned_cols=79  Identities=14%  Similarity=0.207  Sum_probs=48.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCC-CCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .+|||+|++|.+|...++.+...  |++|+++.+... ...+..+.+..-+. .++..+-.+.+.+.++..+   +|+||
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~---~d~vi   80 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRV-ELVVGDIADAELVDKLAAK---ADAIV   80 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSE-EEEECCTTCHHHHHHHHTT---CSEEE
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCe-EEEECCCCCHHHHHHHhhc---CCEEE
Confidence            58999999999999988888777  889999985421 11122111111111 1222222233455555554   89999


Q ss_pred             ECCCcc
Q 023007          267 NCVGGN  272 (288)
Q Consensus       267 d~~g~~  272 (288)
                      +|.+..
T Consensus        81 h~A~~~   86 (348)
T 1oc2_A           81 HYAAES   86 (348)
T ss_dssp             ECCSCC
T ss_pred             ECCccc
Confidence            999854

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.71  E-value=0.022  Score=47.57  Aligned_cols=34  Identities=12%  Similarity=0.163  Sum_probs=29.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      +.+|+|.|+ |++|..++..+.+.|...+.++|.+
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            379999999 9999999999999999877777543

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.70  E-value=0.018  Score=50.67  Aligned_cols=86  Identities=19%  Similarity=0.088  Sum_probs=56.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      -.|++|.|+|. |.+|...++.++.+|++|+...+    +....+..+++|...+     .   .+.++..   ..|+|+
T Consensus       162 l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr----~~~~~~~~~~~g~~~~-----~---~l~ell~---~aDvV~  225 (351)
T 3jtm_A          162 LEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDR----LQMAPELEKETGAKFV-----E---DLNEMLP---KCDVIV  225 (351)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECS----SCCCHHHHHHHCCEEC-----S---CHHHHGG---GCSEEE
T ss_pred             ccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCC----CccCHHHHHhCCCeEc-----C---CHHHHHh---cCCEEE
Confidence            35789999999 99999999999999999888863    2223334445564321     1   1222222   278888


Q ss_pred             ECCCcc-----cH-HHHHhhccCCCeeC
Q 023007          267 NCVGGN-----SA-SKVLKFLRFREEQW  288 (288)
Q Consensus       267 d~~g~~-----~~-~~a~~~l~~~G~~v  288 (288)
                      .++...     .+ ...++.|+++..||
T Consensus       226 l~~Plt~~t~~li~~~~l~~mk~gailI  253 (351)
T 3jtm_A          226 INMPLTEKTRGMFNKELIGKLKKGVLIV  253 (351)
T ss_dssp             ECSCCCTTTTTCBSHHHHHHSCTTEEEE
T ss_pred             ECCCCCHHHHHhhcHHHHhcCCCCCEEE
Confidence            877632     22 56677777776553

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=95.70  E-value=0.027  Score=46.23  Aligned_cols=74  Identities=11%  Similarity=0.042  Sum_probs=47.9

Q ss_pred             CCCeEEEeCC----------------CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc--cH
Q 023007          188 SGDSIVQNGA----------------TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EV  249 (288)
Q Consensus       188 ~g~~vlI~g~----------------~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~  249 (288)
                      .|++|||+|+                +|++|.+.++.+...|++|+.+.+...     .+.  ..|. .+++....  ..
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-----l~~--~~g~-~~~dv~~~~~~~   78 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-----LPT--PPFV-KRVDVMTALEME   78 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-----CCC--CTTE-EEEECCSHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-----ccc--CCCC-eEEccCcHHHHH
Confidence            5789999999                689999999999999999999874321     000  1122 23333221  12


Q ss_pred             HHHHHHhcCCCCccEEEECCCcc
Q 023007          250 KNVKGLLANLPEPALGFNCVGGN  272 (288)
Q Consensus       250 ~~i~~~~~~~g~~D~v~d~~g~~  272 (288)
                      +.+.+..+   ++|++|+|.|-.
T Consensus        79 ~~v~~~~~---~~Dili~~Aav~   98 (226)
T 1u7z_A           79 AAVNASVQ---QQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHHGG---GCSEEEECCBCC
T ss_pred             HHHHHhcC---CCCEEEECCccc
Confidence            33333332   499999998853

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=95.66  E-value=0.04  Score=45.41  Aligned_cols=75  Identities=11%  Similarity=0.059  Sum_probs=48.1

Q ss_pred             CCCeEEEeCC----------------CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc--cH
Q 023007          188 SGDSIVQNGA----------------TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL--EV  249 (288)
Q Consensus       188 ~g~~vlI~g~----------------~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~  249 (288)
                      .|++|||+|+                +|.+|.+.++.+...|++|+.+.+.....+    . ...+. .+++....  -.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----~-~~~~~-~~~~v~s~~em~   75 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP----E-PHPNL-SIREITNTKDLL   75 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----C-CCTTE-EEEECCSHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----c-CCCCe-EEEEHhHHHHHH
Confidence            5889999999                889999999999999999999985421110    0 00122 23332221  12


Q ss_pred             HHHHHHhcCCCCccEEEECCCc
Q 023007          250 KNVKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       250 ~~i~~~~~~~g~~D~v~d~~g~  271 (288)
                      +.+.+..+   ++|++|.|.+-
T Consensus        76 ~~v~~~~~---~~Dili~aAAv   94 (232)
T 2gk4_A           76 IEMQERVQ---DYQVLIHSMAV   94 (232)
T ss_dssp             HHHHHHGG---GCSEEEECSBC
T ss_pred             HHHHHhcC---CCCEEEEcCcc
Confidence            33444333   49999999874

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=95.61  E-value=0.055  Score=47.14  Aligned_cols=85  Identities=11%  Similarity=0.054  Sum_probs=58.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHH-H-cCCeEEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIAR-H-RGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~-~-~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      -+|.|+|+ |.+|...++.++ . .+++++++++   .++++.+ ..+++|...+++.    ++   ++.... ++|+|+
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d---~~~~~~~~~a~~~g~~~~~~~----~~---~~l~~~-~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACA---LDSNQLEWAKNELGVETTYTN----YK---DMIDTE-NIDAIF   76 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEEC---SCHHHHHHHHHTTCCSEEESC----HH---HHHTTS-CCSEEE
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEec---CCHHHHHHHHHHhCCCcccCC----HH---HHhcCC-CCCEEE
Confidence            47999999 999998888776 4 4778887775   3666664 4466787554431    22   223322 399999


Q ss_pred             ECCCcccH-HHHHhhccCCCe
Q 023007          267 NCVGGNSA-SKVLKFLRFREE  286 (288)
Q Consensus       267 d~~g~~~~-~~a~~~l~~~G~  286 (288)
                      .|+....- +.+.++++.|-.
T Consensus        77 i~tp~~~h~~~~~~al~~G~~   97 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAGLN   97 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCE
T ss_pred             EeCChHhHHHHHHHHHHCCCE
Confidence            99987664 778888877643

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.61  E-value=0.032  Score=47.68  Aligned_cols=35  Identities=14%  Similarity=0.157  Sum_probs=30.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA  224 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~  224 (288)
                      ..+|+|.|+ |++|..+++.+.+.|...+.++|.+.
T Consensus        36 ~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           36 TFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            479999999 99999999999999997777776543

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.60  E-value=0.063  Score=47.20  Aligned_cols=84  Identities=13%  Similarity=0.033  Sum_probs=58.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++|.|+|. |.+|...++.++..|++|++..    .+ .+.+...+.|+..+     ...+.+..      ..|+|+.
T Consensus       159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d----~~-~~~~~~~~~g~~~~-----~~l~ell~------~aDiV~l  221 (352)
T 3gg9_A          159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWG----RE-NSKERARADGFAVA-----ESKDALFE------QSDVLSV  221 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SH-HHHHHHHHTTCEEC-----SSHHHHHH------HCSEEEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEC----CC-CCHHHHHhcCceEe-----CCHHHHHh------hCCEEEE
Confidence            4789999999 9999999999999999999886    23 34455566776421     11222222      2888888


Q ss_pred             CCCcc-----cH-HHHHhhccCCCeeC
Q 023007          268 CVGGN-----SA-SKVLKFLRFREEQW  288 (288)
Q Consensus       268 ~~g~~-----~~-~~a~~~l~~~G~~v  288 (288)
                      ++...     .. ...++.|+++..||
T Consensus       222 ~~Plt~~t~~li~~~~l~~mk~gailI  248 (352)
T 3gg9_A          222 HLRLNDETRSIITVADLTRMKPTALFV  248 (352)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEE
T ss_pred             eccCcHHHHHhhCHHHHhhCCCCcEEE
Confidence            87532     22 56778888887664

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=95.59  E-value=0.029  Score=48.98  Aligned_cols=77  Identities=12%  Similarity=0.082  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcC-----CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRG-----IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g-----~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      +.+|||+|++|.+|...++.+...|     .+|+++.+......     ....+. .++..+-.+.+.+.+...+.+++|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HEDNPI-NYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----CCSSCC-EEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----cccCce-EEEEeecCCHHHHHHHHhcCCCCC
Confidence            3589999999999999998888889     89999986532111     111122 222222222345555544432399


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      +||+|.+.
T Consensus        75 ~vih~a~~   82 (364)
T 2v6g_A           75 HVFYVTWA   82 (364)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=95.58  E-value=0.035  Score=48.40  Aligned_cols=78  Identities=12%  Similarity=0.215  Sum_probs=45.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCC-CCHHHHHHHHhC--CCC-EEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRA-GSDEAKEKLKGL--GAD-EVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~-~~~~~~~~~~~~--g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      +|||+|++|.+|...++.+... |++|+++.+... ...+.   ++++  +.. .++..+-.+.+.+.++.... ++|+|
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~v   77 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES---LSDISESNRYNFEHADICDSAEITRIFEQY-QPDAV   77 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG---GTTTTTCTTEEEEECCTTCHHHHHHHHHHH-CCSEE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh---hhhhhcCCCeEEEECCCCCHHHHHHHHhhc-CCCEE
Confidence            5999999999999988877776 799999875321 11122   2222  111 22222222233444433311 39999


Q ss_pred             EECCCcc
Q 023007          266 FNCVGGN  272 (288)
Q Consensus       266 ~d~~g~~  272 (288)
                      |+|.|..
T Consensus        78 ih~A~~~   84 (361)
T 1kew_A           78 MHLAAES   84 (361)
T ss_dssp             EECCSCC
T ss_pred             EECCCCc
Confidence            9999853

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.56  E-value=0.035  Score=48.50  Aligned_cols=84  Identities=8%  Similarity=-0.007  Sum_probs=57.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      -.|++|.|+|. |.+|...++.++..|++|++....    .++ +...++|++. .     ..+   ++..   +.|+|+
T Consensus       163 l~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~----~~~-~~~~~~g~~~-~-----~l~---ell~---~aDvV~  224 (335)
T 2g76_A          163 LNGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPI----ISP-EVSASFGVQQ-L-----PLE---EIWP---LCDFIT  224 (335)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSS----SCH-HHHHHTTCEE-C-----CHH---HHGG---GCSEEE
T ss_pred             CCcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCC----cch-hhhhhcCcee-C-----CHH---HHHh---cCCEEE
Confidence            35789999999 999999999999999999888632    222 2455677642 1     122   2222   288888


Q ss_pred             ECCCccc-----H-HHHHhhccCCCeeC
Q 023007          267 NCVGGNS-----A-SKVLKFLRFREEQW  288 (288)
Q Consensus       267 d~~g~~~-----~-~~a~~~l~~~G~~v  288 (288)
                      .|+....     + ...++.+++++.|+
T Consensus       225 l~~P~t~~t~~li~~~~l~~mk~gailI  252 (335)
T 2g76_A          225 VHTPLLPSTTGLLNDNTFAQCKKGVRVV  252 (335)
T ss_dssp             ECCCCCTTTTTSBCHHHHTTSCTTEEEE
T ss_pred             EecCCCHHHHHhhCHHHHhhCCCCcEEE
Confidence            8876532     2 45677888876653

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.55  E-value=0.02  Score=50.09  Aligned_cols=78  Identities=13%  Similarity=0.133  Sum_probs=45.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcC--CCCccE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLAN--LPEPAL  264 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~--~g~~D~  264 (288)
                      ++.+|||+|++|.+|...++.+...| .+|+++.+..  ...+.+.+..+...  .|.  .+.+.+..+..+  .+++|+
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~--~~~~~~~~~~~~~~--~d~--~~~~~~~~~~~~~~~~~~d~  118 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLK--DGTKFVNLVDLNIA--DYM--DKEDFLIQIMAGEEFGDVEA  118 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCS--SGGGGGGTTTSCCS--EEE--EHHHHHHHHHTTCCCSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCC--CcchhhcccCceEe--eec--CcHHHHHHHHhhcccCCCCE
Confidence            34789999999999999999888889 8999988542  11111111111110  111  112334444332  124999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      ||+|.+.
T Consensus       119 Vih~A~~  125 (357)
T 2x6t_A          119 IFHEGAC  125 (357)
T ss_dssp             EEECCSC
T ss_pred             EEECCcc
Confidence            9999874

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.53  E-value=0.04  Score=45.78  Aligned_cols=97  Identities=10%  Similarity=0.058  Sum_probs=59.2

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCcccHHHHHH
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNVKG  254 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~i~~  254 (288)
                      ....++++||-+|+  +.|..++.+++.+  +.+++++.    .+++..+.++    +.|..   .++..+.  .+.+..
T Consensus        75 ~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD----~s~~~~~~a~~~~~~~g~~~~i~~~~gda--~~~l~~  146 (247)
T 1sui_A           75 LKLINAKNTMEIGV--YTGYSLLATALAIPEDGKILAMD----INKENYELGLPVIKKAGVDHKIDFREGPA--LPVLDE  146 (247)
T ss_dssp             HHHTTCCEEEEECC--GGGHHHHHHHHHSCTTCEEEEEE----SCCHHHHHHHHHHHHTTCGGGEEEEESCH--HHHHHH
T ss_pred             HHhhCcCEEEEeCC--CcCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCCeEEEECCH--HHHHHH
Confidence            34556789999987  5688888888886  57888876    4666655553    45653   1222221  122333


Q ss_pred             Hhc-C--CCCccEEEECCCc----ccHHHHHhhccCCCeeC
Q 023007          255 LLA-N--LPEPALGFNCVGG----NSASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~-~--~g~~D~v~d~~g~----~~~~~a~~~l~~~G~~v  288 (288)
                      +.. +  .+.||+||-....    ..+..+.++|+|||.++
T Consensus       147 l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv  187 (247)
T 1sui_A          147 MIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIG  187 (247)
T ss_dssp             HHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEE
T ss_pred             HHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEE
Confidence            321 0  1259998854332    22378889999999874

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.53  E-value=0.04  Score=47.07  Aligned_cols=45  Identities=16%  Similarity=0.190  Sum_probs=34.9

Q ss_pred             HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .+..+.....--.|++++|.|.+..+|.-++.++...|++|+++-
T Consensus       152 i~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~h  196 (301)
T 1a4i_A          152 CLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCH  196 (301)
T ss_dssp             HHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEE
Confidence            334444433345789999999966799999999999999988774

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=95.53  E-value=0.029  Score=49.41  Aligned_cols=33  Identities=18%  Similarity=0.264  Sum_probs=30.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++|||+|++|.+|...++.+...|++|+++.+.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~   61 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   61 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Confidence            689999999999999999988899999999864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=95.51  E-value=0.015  Score=51.30  Aligned_cols=33  Identities=18%  Similarity=0.309  Sum_probs=30.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++|||+|++|.+|...++.+...|++|+++.+.
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   57 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRR   57 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence            589999999999999999888899999999864

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.50  E-value=0.047  Score=47.19  Aligned_cols=83  Identities=13%  Similarity=0.057  Sum_probs=55.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      -.|++|.|+|. |.+|...++.++..|++|++....    .++. ..+++|... .     ..+.+..      ..|+|+
T Consensus       140 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~----~~~~-~~~~~g~~~-~-----~l~ell~------~aDvVv  201 (313)
T 2ekl_A          140 LAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDIL----DIRE-KAEKINAKA-V-----SLEELLK------NSDVIS  201 (313)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSS----CCHH-HHHHTTCEE-C-----CHHHHHH------HCSEEE
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCC----cchh-HHHhcCcee-c-----CHHHHHh------hCCEEE
Confidence            45789999999 999999999999999999888642    3222 345677542 1     1222222      278888


Q ss_pred             ECCCccc-----H-HHHHhhccCCCee
Q 023007          267 NCVGGNS-----A-SKVLKFLRFREEQ  287 (288)
Q Consensus       267 d~~g~~~-----~-~~a~~~l~~~G~~  287 (288)
                      .|+....     + ...++.+++++.+
T Consensus       202 l~~P~~~~t~~li~~~~l~~mk~ga~l  228 (313)
T 2ekl_A          202 LHVTVSKDAKPIIDYPQFELMKDNVII  228 (313)
T ss_dssp             ECCCCCTTSCCSBCHHHHHHSCTTEEE
T ss_pred             EeccCChHHHHhhCHHHHhcCCCCCEE
Confidence            8876321     2 4566777777655

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.47  E-value=0.017  Score=47.91  Aligned_cols=96  Identities=17%  Similarity=0.175  Sum_probs=61.8

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCcccHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~i  252 (288)
                      +.....+.++.+||-+|+ |. |..+..+++..|.+++++.    .+++..+.++    ..|..   .++..+..   ..
T Consensus        28 l~~~~~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~v~gvD----~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~---~~   98 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGS-GS-GEMLCTWARDHGITGTGID----MSSLFTAQAKRRAEELGVSERVHFIHNDAA---GY   98 (256)
T ss_dssp             HHHHTCCCTTCEEEEETC-TT-CHHHHHHHHHTCCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEESCCT---TC
T ss_pred             HHHhcCCCCCCEEEEECC-CC-CHHHHHHHHhcCCeEEEEe----CCHHHHHHHHHHHHhcCCCcceEEEECChH---hC
Confidence            344567889999999998 33 7788889988899998887    5777776654    34432   12221111   11


Q ss_pred             HHHhcCCCCccEEEECCC-----c--ccHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVG-----G--NSASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g-----~--~~~~~a~~~l~~~G~~v  288 (288)
                      . . .+  .+|+|+....     +  ..+..+.++|+|||+++
T Consensus        99 ~-~-~~--~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~  137 (256)
T 1nkv_A           99 V-A-NE--KCDVAACVGATWIAGGFAGAEELLAQSLKPGGIML  137 (256)
T ss_dssp             C-C-SS--CEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEE
T ss_pred             C-c-CC--CCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEE
Confidence            0 1 22  4999986322     1  12477788999999874

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.47  E-value=0.043  Score=46.59  Aligned_cols=52  Identities=21%  Similarity=0.176  Sum_probs=38.8

Q ss_pred             cccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          169 IIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       169 l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      +|+.....+..+.....--.|++++|.|.+..+|.-++.++...|++|+++-
T Consensus       139 ~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~h  190 (288)
T 1b0a_A          139 RPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTH  190 (288)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEEC
T ss_pred             CCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEe
Confidence            3433333444455544456789999999966799999999999999998885

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.47  E-value=0.04  Score=46.39  Aligned_cols=68  Identities=13%  Similarity=0.162  Sum_probs=48.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      .+|||+|+ |.+|...++.+...|.+|+++++    ++++.+.+...+...+. .+-.+++     ..   ++|+||+|.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r----~~~~~~~~~~~~~~~~~-~D~~d~~-----~~---~~d~vi~~a   71 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSR----NPDQMEAIRASGAEPLL-WPGEEPS-----LD---GVTHLLIST   71 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEES----CGGGHHHHHHTTEEEEE-SSSSCCC-----CT---TCCEEEECC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEc----ChhhhhhHhhCCCeEEE-ecccccc-----cC---CCCEEEECC
Confidence            58999998 99999999999989999999994    56666666655654332 1111111     11   499999998


Q ss_pred             Cc
Q 023007          270 GG  271 (288)
Q Consensus       270 g~  271 (288)
                      +.
T Consensus        72 ~~   73 (286)
T 3ius_A           72 AP   73 (286)
T ss_dssp             CC
T ss_pred             Cc
Confidence            75

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=95.46  E-value=0.043  Score=47.55  Aligned_cols=35  Identities=14%  Similarity=0.143  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++.+|||+|++|.+|...++.+...|++|+++.+.
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   60 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   60 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45799999999999999999888889999999864

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=95.45  E-value=0.028  Score=48.70  Aligned_cols=76  Identities=17%  Similarity=0.154  Sum_probs=46.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcC-------CeEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCCcccHHHHHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRG-------IHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g-------~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~  259 (288)
                      .+.+|||+|++|.+|...++.+...|       ++|+++.+......+      ..+.. .++..+-.+.+.+.++..+ 
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~-   85 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLVEA-   85 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHHHT-
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHHhc-
Confidence            45689999999999999998888889       789988854321111      11111 1121111112234333322 


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                       ++|+||+|.+.
T Consensus        86 -~~d~vih~A~~   96 (342)
T 2hrz_A           86 -RPDVIFHLAAI   96 (342)
T ss_dssp             -CCSEEEECCCC
T ss_pred             -CCCEEEECCcc
Confidence             49999999985

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.44  E-value=0.07  Score=47.80  Aligned_cols=89  Identities=15%  Similarity=0.144  Sum_probs=51.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcC---CeEEEEEcCCCCCHHHHHHH-HhCCC-----CEEEeCCcccHHHHHHHhcCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRG---IHSINIIRDRAGSDEAKEKL-KGLGA-----DEVFTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g---~~vi~~~~~~~~~~~~~~~~-~~~g~-----~~v~~~~~~~~~~i~~~~~~~g  260 (288)
                      .+|+|+|+ |.+|..+++.+...|   .++++..    .+.++.+.+ ++++.     -..+.-+..+.+.+.++..+. 
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~----r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLAS----RTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEE----SCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEE----CCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-
Confidence            47999999 999999999888877   3777776    466665543 33321     112211111223333333322 


Q ss_pred             CccEEEECCCcccH-HHHHhhccCC
Q 023007          261 EPALGFNCVGGNSA-SKVLKFLRFR  284 (288)
Q Consensus       261 ~~D~v~d~~g~~~~-~~a~~~l~~~  284 (288)
                      ++|+||+|++.... ..+..|++.+
T Consensus        76 ~~DvVin~ag~~~~~~v~~a~l~~g  100 (405)
T 4ina_A           76 KPQIVLNIALPYQDLTIMEACLRTG  100 (405)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHHT
T ss_pred             CCCEEEECCCcccChHHHHHHHHhC
Confidence            28999999986543 4444455443

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=95.36  E-value=0.028  Score=47.47  Aligned_cols=36  Identities=17%  Similarity=0.171  Sum_probs=30.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .++..+|||+|++|.+|...++.+...|++|+++.+
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r   44 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDV   44 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECT
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccC
Confidence            456689999999999999999999888999998874

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.34  E-value=0.025  Score=45.45  Aligned_cols=93  Identities=11%  Similarity=-0.055  Sum_probs=61.0

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE--EeCCcccHHHHHHHhcCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV--FTESQLEVKNVKGLLANL  259 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~i~~~~~~~  259 (288)
                      .+..+.++.+||-+|+ | .|..+..+++. |.+++++.    .+++..+.+++.+...+  +..+..   ..  ...+ 
T Consensus        40 ~l~~~~~~~~vLdiG~-G-~G~~~~~l~~~-~~~v~~~D----~s~~~~~~a~~~~~~~~~~~~~d~~---~~--~~~~-  106 (218)
T 3ou2_A           40 RLRAGNIRGDVLELAS-G-TGYWTRHLSGL-ADRVTALD----GSAEMIAEAGRHGLDNVEFRQQDLF---DW--TPDR-  106 (218)
T ss_dssp             HHTTTTSCSEEEEESC-T-TSHHHHHHHHH-SSEEEEEE----SCHHHHHHHGGGCCTTEEEEECCTT---SC--CCSS-
T ss_pred             HHhcCCCCCeEEEECC-C-CCHHHHHHHhc-CCeEEEEe----CCHHHHHHHHhcCCCCeEEEecccc---cC--CCCC-
Confidence            3345788899999998 3 37777777777 88998887    68888888877553222  211111   11  1122 


Q ss_pred             CCccEEEECCCc---------ccHHHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGG---------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~---------~~~~~a~~~l~~~G~~v  288 (288)
                       .+|+|+.+..-         ..+..+.+.|+|+|+++
T Consensus       107 -~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~  143 (218)
T 3ou2_A          107 -QWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVE  143 (218)
T ss_dssp             -CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             -ceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEE
Confidence             59999875432         12366778999999874

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.33  E-value=0.014  Score=50.23  Aligned_cols=91  Identities=15%  Similarity=0.124  Sum_probs=59.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCcccHHHHHHHhcC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNVKGLLAN  258 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~i~~~~~~  258 (288)
                      ++++++||-+|+  +.|..+..+++..|++++++.    .+++..+.++    ..|..   .++..+...   +. +..+
T Consensus       115 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~-~~~~  184 (312)
T 3vc1_A          115 AGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVT----LSAAQADFGNRRARELRIDDHVRSRVCNMLD---TP-FDKG  184 (312)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEECCTTS---CC-CCTT
T ss_pred             CCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHHHHHcCCCCceEEEECChhc---CC-CCCC
Confidence            788999999998  347888888888799999887    5777776664    34432   222211111   00 1112


Q ss_pred             CCCccEEEECCC------cccHHHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCVG------GNSASKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~g------~~~~~~a~~~l~~~G~~v  288 (288)
                        .+|+|+.+..      ...+..+.++|+|||+++
T Consensus       185 --~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~  218 (312)
T 3vc1_A          185 --AVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYV  218 (312)
T ss_dssp             --CEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEE
T ss_pred             --CEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEE
Confidence              5999987433      122378889999999974

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=95.31  E-value=0.036  Score=47.09  Aligned_cols=32  Identities=22%  Similarity=0.441  Sum_probs=29.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +|||+|++|-+|...++.+...|.+|+++++.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~   33 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRK   33 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            59999999999999999999999999999864

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.30  E-value=0.046  Score=46.47  Aligned_cols=71  Identities=14%  Similarity=0.017  Sum_probs=46.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHH-HhCCC---CEEEeCCcccHHHHHHHhcCCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL-KGLGA---DEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~-~~~g~---~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      -.+++++|+|+ |++|.+++..+...|+ +++++.    ++.++.+.+ ++++.   -.+....+        +.  . +
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~----R~~~~a~~la~~~~~~~~~~~~~~~~--------l~--~-~  187 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTN----RTFAKAEQLAELVAAYGEVKAQAFEQ--------LK--Q-S  187 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEE----SSHHHHHHHHHHHGGGSCEEEEEGGG--------CC--S-C
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEE----CCHHHHHHHHHHhhccCCeeEeeHHH--------hc--C-C
Confidence            36789999999 8999999998888997 777777    456665433 34432   12222111        11  1 3


Q ss_pred             ccEEEECCCccc
Q 023007          262 PALGFNCVGGNS  273 (288)
Q Consensus       262 ~D~v~d~~g~~~  273 (288)
                      +|+||+|++...
T Consensus       188 aDiIInaTp~gm  199 (281)
T 3o8q_A          188 YDVIINSTSASL  199 (281)
T ss_dssp             EEEEEECSCCCC
T ss_pred             CCEEEEcCcCCC
Confidence            888888886543

>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*

Probab=95.28  E-value=0.2  Score=44.48  Aligned_cols=94  Identities=11%  Similarity=0.127  Sum_probs=62.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHH-HHHHHhCCCCEEEeCCcccHHHH--------------
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEVKNV--------------  252 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~i--------------  252 (288)
                      .+|.|+|+||.+|...+.+.+...  +++.++...  .+.++ .+.+++++...+...+......+              
T Consensus         5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag--~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~v~~g   82 (388)
T 1r0k_A            5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN--RNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAG   82 (388)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES--SCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEES
T ss_pred             eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcC--CCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcEEEeC
Confidence            579999999999999998888753  677766322  34444 45667899988765554322222              


Q ss_pred             ----HHHhcCCCCccEEEECCCc-ccHHHHHhhccCCCee
Q 023007          253 ----KGLLANLPEPALGFNCVGG-NSASKVLKFLRFREEQ  287 (288)
Q Consensus       253 ----~~~~~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~~  287 (288)
                          .++.. .. +|+|+++.++ ..+..++..++.|=++
T Consensus        83 ~~~~~el~~-~~-iDvVV~ai~G~aGl~ptlaAi~aGK~V  120 (388)
T 1r0k_A           83 ADALVEAAM-MG-ADWTMAAIIGCAGLKATLAAIRKGKTV  120 (388)
T ss_dssp             HHHHHHHHT-SC-CSEEEECCCSGGGHHHHHHHHHTTSEE
T ss_pred             ccHHHHHHc-CC-CCEEEEeCCCHHHHHHHHHHHHCCCEE
Confidence                22333 24 8999999944 4447777777766444

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.27  E-value=0.031  Score=47.14  Aligned_cols=98  Identities=10%  Similarity=0.017  Sum_probs=61.0

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHh----C-CCCEEEeCCcccHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKG----L-GADEVFTESQLEVKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~----~-g~~~v~~~~~~~~~~i  252 (288)
                      +.....++++++||-.|+ | .|..+..+++..  +.+++++.    .+++..+.+++    . |.+.+-....+. .. 
T Consensus       102 ~~~~~~~~~~~~VLD~G~-G-~G~~~~~la~~~~~~~~v~~vD----~s~~~~~~a~~~~~~~~g~~~v~~~~~d~-~~-  173 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGV-G-SGNMSSYILYALNGKGTLTVVE----RDEDNLKKAMDNLSEFYDIGNVRTSRSDI-AD-  173 (275)
T ss_dssp             ----CCCCTTCEEEEECC-T-TSHHHHHHHHHHTTSSEEEEEC----SCHHHHHHHHHHHHTTSCCTTEEEECSCT-TT-
T ss_pred             HHHHcCCCCcCEEEEecC-C-CCHHHHHHHHHcCCCCEEEEEE----CCHHHHHHHHHHHHhcCCCCcEEEEECch-hc-
Confidence            334467889999999988 3 677788888874  57888876    57777766643    3 533221111111 01 


Q ss_pred             HHHhcCCCCccEEEECCCcc--cHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVGGN--SASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~~--~~~~a~~~l~~~G~~v  288 (288)
                        .... +.+|+|+-.....  .++.+.+.|+|+|+++
T Consensus       174 --~~~~-~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~  208 (275)
T 1yb2_A          174 --FISD-QMYDAVIADIPDPWNHVQKIASMMKPGSVAT  208 (275)
T ss_dssp             --CCCS-CCEEEEEECCSCGGGSHHHHHHTEEEEEEEE
T ss_pred             --cCcC-CCccEEEEcCcCHHHHHHHHHHHcCCCCEEE
Confidence              1111 2499999866543  3488999999999874

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=95.26  E-value=0.048  Score=46.93  Aligned_cols=33  Identities=15%  Similarity=0.098  Sum_probs=29.8

Q ss_pred             CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEEEE
Q 023007          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .|++++|+|+  ++++|.+.++.+...|++|+++.
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~   42 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGT   42 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEe
Confidence            5789999999  79999999998888999999886

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.26  E-value=0.077  Score=44.86  Aligned_cols=71  Identities=10%  Similarity=-0.060  Sum_probs=46.8

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHH-HhCCC--CEEEeCCcccHHHHHHHhcCCCCc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL-KGLGA--DEVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~-~~~g~--~~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      -.+++++|+|+ |++|.+++..+...|+ +++++.    ++.++.+.+ ++++.  -.+....+        +.. . ++
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~----R~~~~a~~la~~~~~~~~~~~~~~~--------l~~-~-~~  182 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIAN----RDMAKALALRNELDHSRLRISRYEA--------LEG-Q-SF  182 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEEC----SCHHHHHHHHHHHCCTTEEEECSGG--------GTT-C-CC
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHHHHHhccCCeeEeeHHH--------hcc-c-CC
Confidence            36789999999 9999999998889997 777776    466665543 44442  12222211        111 1 48


Q ss_pred             cEEEECCCcc
Q 023007          263 ALGFNCVGGN  272 (288)
Q Consensus       263 D~v~d~~g~~  272 (288)
                      |+||+|++..
T Consensus       183 DivInaTp~g  192 (272)
T 3pwz_A          183 DIVVNATSAS  192 (272)
T ss_dssp             SEEEECSSGG
T ss_pred             CEEEECCCCC
Confidence            9999988653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=95.24  E-value=0.077  Score=45.09  Aligned_cols=42  Identities=10%  Similarity=0.090  Sum_probs=33.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~  233 (288)
                      -.+++++|+|+ |+.|.+++..+...|+ +++++.    ++.++.+.+
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~n----Rt~~ka~~L  162 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVT----RNPEKTSEI  162 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEE----SCHHHHHHH
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEe----CCHHHHHHH
Confidence            46889999999 8999999999999999 677776    466666544

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=95.21  E-value=0.054  Score=45.99  Aligned_cols=75  Identities=12%  Similarity=0.089  Sum_probs=46.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCC--CCccEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANL--PEPALGFN  267 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~--g~~D~v~d  267 (288)
                      +|||+|++|.+|...++.+...| .+|+++.+..  ...+...+..+...  .|.  .+.+.+..+..+.  +++|+||+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~--~~~~~~~~~~~~~~--~d~--~~~~~~~~~~~~~~~~~~d~vi~   74 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLK--DGTKFVNLVDLNIA--DYM--DKEDFLIQIMAGEEFGDVEAIFH   74 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCS--SGGGGHHHHTSCCS--EEE--EHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCC--CCchhhhcCcceec--ccc--ccHHHHHHHHhccccCCCcEEEE
Confidence            48999999999999999888889 8999988542  11112223322211  111  1123444444331  13999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      |.+.
T Consensus        75 ~a~~   78 (310)
T 1eq2_A           75 EGAC   78 (310)
T ss_dssp             CCSC
T ss_pred             Cccc
Confidence            9874

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.21  E-value=0.012  Score=48.69  Aligned_cols=92  Identities=9%  Similarity=-0.022  Sum_probs=57.8

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC----CC-EEEeCCcccHHHHH-HHhcCC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG----AD-EVFTESQLEVKNVK-GLLANL  259 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g----~~-~v~~~~~~~~~~i~-~~~~~~  259 (288)
                      ..+|.+||=+|+  +.|..+..+++..+.+++++.    .+++..+.+++..    .. .++..+   .+.+. .+..+ 
T Consensus        58 ~~~G~rVLdiG~--G~G~~~~~~~~~~~~~v~~id----~~~~~~~~a~~~~~~~~~~~~~~~~~---a~~~~~~~~~~-  127 (236)
T 3orh_A           58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIE----CNDGVFQRLRDWAPRQTHKVIPLKGL---WEDVAPTLPDG-  127 (236)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHTTSCEEEEEEEE----CCHHHHHHHHHHGGGCSSEEEEEESC---HHHHGGGSCTT-
T ss_pred             ccCCCeEEEECC--CccHHHHHHHHhCCcEEEEEe----CCHHHHHHHHHHHhhCCCceEEEeeh---HHhhccccccc-
Confidence            468899999999  357778888887777887776    5788888776532    21 122211   12222 22222 


Q ss_pred             CCccEE-EECCCc-----------ccHHHHHhhccCCCeeC
Q 023007          260 PEPALG-FNCVGG-----------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v-~d~~g~-----------~~~~~a~~~l~~~G~~v  288 (288)
                       .||.| +|+...           ..+..+.++|+|||+|+
T Consensus       128 -~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~  167 (236)
T 3orh_A          128 -HFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLT  167 (236)
T ss_dssp             -CEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred             -CCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEE
Confidence             48876 565432           11256788999999973

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.21  E-value=0.018  Score=48.91  Aligned_cols=34  Identities=15%  Similarity=-0.118  Sum_probs=29.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~  221 (288)
                      -.+++++|+|+ |++|.+++..+...|+ +++++.+
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R  149 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANR  149 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC
Confidence            36789999999 9999999999999999 7777763

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.20  E-value=0.047  Score=48.19  Aligned_cols=47  Identities=15%  Similarity=0.152  Sum_probs=37.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGA  238 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~  238 (288)
                      -+|++|+|.|. |.+|..+++.+...|++|+++ +   .+.++.+ +.+++|+
T Consensus       171 L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~-D---~~~~~l~~~a~~~ga  218 (364)
T 1leh_A          171 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVT-D---VNKAAVSAAVAEEGA  218 (364)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEE-C---SCHHHHHHHHHHHCC
T ss_pred             CCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEE-c---CCHHHHHHHHHHcCC
Confidence            47899999999 999999999999999998844 3   4566655 4455554

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=95.12  E-value=0.048  Score=46.58  Aligned_cols=70  Identities=11%  Similarity=0.104  Sum_probs=44.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          191 SIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      +|||+|++|.+|...++.+...  |.+|+++.+.....+         +... +..+-.+.+.+.++.... ++|+||+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------~~~~-~~~D~~d~~~~~~~~~~~-~~d~vih~   69 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---------GIKF-ITLDVSNRDEIDRAVEKY-SIDAIFHL   69 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---------TCCE-EECCTTCHHHHHHHHHHT-TCCEEEEC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---------CceE-EEecCCCHHHHHHHHhhc-CCcEEEEC
Confidence            4899999999999988877777  789998875422111         2222 222212233444443322 39999999


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      .+.
T Consensus        70 a~~   72 (317)
T 3ajr_A           70 AGI   72 (317)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            984

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=95.11  E-value=0.017  Score=48.24  Aligned_cols=71  Identities=14%  Similarity=0.033  Sum_probs=46.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      ++|||+|++|.+|...++.+...|++|+++.+......       ..+. .++..+-.+.+.+.++..+   +|+||+|.
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~-~~~~~Dl~d~~~~~~~~~~---~d~vi~~a   71 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------EAHE-EIVACDLADAQAVHDLVKD---CDGIIHLG   71 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------CTTE-EECCCCTTCHHHHHHHHTT---CSEEEECC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------CCCc-cEEEccCCCHHHHHHHHcC---CCEEEECC
Confidence            47999999999999999888888999999886432110       0121 2222222233455555553   99999998


Q ss_pred             Cc
Q 023007          270 GG  271 (288)
Q Consensus       270 g~  271 (288)
                      +.
T Consensus        72 ~~   73 (267)
T 3ay3_A           72 GV   73 (267)
T ss_dssp             SC
T ss_pred             cC
Confidence            74

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.05  E-value=0.072  Score=43.83  Aligned_cols=97  Identities=14%  Similarity=0.111  Sum_probs=59.6

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHH----hCCCCE---EEeCCcccHHHHHH
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGADE---VFTESQLEVKNVKG  254 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~g~~~---v~~~~~~~~~~i~~  254 (288)
                      ....++++||-+|+  +.|..++.+++.+  +.+++.+.    .+++..+.++    +.|...   ++..+.  .+.+..
T Consensus        66 ~~~~~~~~VLeiG~--G~G~~~~~la~~~~~~~~v~~iD----~~~~~~~~a~~~~~~~g~~~~i~~~~gda--~~~l~~  137 (237)
T 3c3y_A           66 LKLVNAKKTIEVGV--FTGYSLLLTALSIPDDGKITAID----FDREAYEIGLPFIRKAGVEHKINFIESDA--MLALDN  137 (237)
T ss_dssp             HHHTTCCEEEEECC--TTSHHHHHHHHHSCTTCEEEEEE----SCHHHHHHHHHHHHHTTCGGGEEEEESCH--HHHHHH
T ss_pred             HHhhCCCEEEEeCC--CCCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcEEEEEcCH--HHHHHH
Confidence            34556789999988  4677778888876  56777776    5777766654    456531   222221  222333


Q ss_pred             Hh-cC--CCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          255 LL-AN--LPEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~-~~--~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      +. .+  .+.+|+||-.....    .++.+.++|+|||.++
T Consensus       138 l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv  178 (237)
T 3c3y_A          138 LLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVA  178 (237)
T ss_dssp             HHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEE
T ss_pred             HHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEE
Confidence            32 11  12599988554322    2377889999999874

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.00  E-value=0.054  Score=45.79  Aligned_cols=53  Identities=15%  Similarity=0.185  Sum_probs=38.0

Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEE
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINII  220 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~  220 (288)
                      .+|+....++..+.+...--.|++++|.|.+..+|..+++++...  |++|+++-
T Consensus       137 ~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h  191 (281)
T 2c2x_A          137 PLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCH  191 (281)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEEC
T ss_pred             CCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence            334333334445555443457899999999667899999999999  89988774

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=94.97  E-value=0.075  Score=46.89  Aligned_cols=83  Identities=11%  Similarity=0.054  Sum_probs=56.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++|.|+|. |.+|...++.++.+|.+|++...    +. +.+...+.|+..      ..++.+.   .   ..|+|+.
T Consensus       175 ~gktvGIIGl-G~IG~~vA~~l~~fG~~V~~~d~----~~-~~~~~~~~g~~~------~~l~ell---~---~aDvV~l  236 (365)
T 4hy3_A          175 AGSEIGIVGF-GDLGKALRRVLSGFRARIRVFDP----WL-PRSMLEENGVEP------ASLEDVL---T---KSDFIFV  236 (365)
T ss_dssp             SSSEEEEECC-SHHHHHHHHHHTTSCCEEEEECS----SS-CHHHHHHTTCEE------CCHHHHH---H---SCSEEEE
T ss_pred             CCCEEEEecC-CcccHHHHHhhhhCCCEEEEECC----CC-CHHHHhhcCeee------CCHHHHH---h---cCCEEEE
Confidence            3789999999 99999999999999999998863    22 223444566531      1122322   2   3888888


Q ss_pred             CCCcc-----cH-HHHHhhccCCCeeC
Q 023007          268 CVGGN-----SA-SKVLKFLRFREEQW  288 (288)
Q Consensus       268 ~~g~~-----~~-~~a~~~l~~~G~~v  288 (288)
                      ++...     .. ...++.|+++..||
T Consensus       237 ~~Plt~~T~~li~~~~l~~mk~gailI  263 (365)
T 4hy3_A          237 VAAVTSENKRFLGAEAFSSMRRGAAFI  263 (365)
T ss_dssp             CSCSSCC---CCCHHHHHTSCTTCEEE
T ss_pred             cCcCCHHHHhhcCHHHHhcCCCCcEEE
Confidence            76532     22 56678888887664

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=94.95  E-value=0.035  Score=49.54  Aligned_cols=84  Identities=10%  Similarity=-0.042  Sum_probs=54.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++|.|+|. |.+|...++.++.+|.+|++...    +.+..+..+++|+...    . ..+   ++..   ..|+|+.
T Consensus       190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~----~~~~~~~~~~~G~~~~----~-~l~---ell~---~aDvV~l  253 (393)
T 2nac_A          190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDR----HRLPESVEKELNLTWH----A-TRE---DMYP---VCDVVTL  253 (393)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECS----SCCCHHHHHHHTCEEC----S-SHH---HHGG---GCSEEEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcC----CccchhhHhhcCceec----C-CHH---HHHh---cCCEEEE
Confidence            5789999999 99999999999999999988863    2222334445564321    0 112   2222   2788887


Q ss_pred             CCCcc-----cH-HHHHhhccCCCee
Q 023007          268 CVGGN-----SA-SKVLKFLRFREEQ  287 (288)
Q Consensus       268 ~~g~~-----~~-~~a~~~l~~~G~~  287 (288)
                      ++...     .+ ...++.|+++..|
T Consensus       254 ~~Plt~~t~~li~~~~l~~mk~gail  279 (393)
T 2nac_A          254 NCPLHPETEHMINDETLKLFKRGAYI  279 (393)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEE
T ss_pred             ecCCchHHHHHhhHHHHhhCCCCCEE
Confidence            76631     22 4566777776554

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=94.93  E-value=0.066  Score=46.71  Aligned_cols=35  Identities=14%  Similarity=0.298  Sum_probs=30.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .+.+|+|.|+ |++|..++..+...|...+.++|.+
T Consensus        33 ~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           33 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             hCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            3579999999 9999999999999999888877653

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=94.92  E-value=0.087  Score=43.46  Aligned_cols=95  Identities=13%  Similarity=0.042  Sum_probs=59.9

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHhC----C-CCEEEeCCcccHHHHHHHh
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGL----G-ADEVFTESQLEVKNVKGLL  256 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~----g-~~~v~~~~~~~~~~i~~~~  256 (288)
                      ..++||++||=+|+  +.|..+..+++..|.  +|+++.    .+++..+.+++.    + ...+. .+....+..... 
T Consensus        73 l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD----~s~~~~~~l~~~a~~~~ni~~V~-~d~~~p~~~~~~-  144 (233)
T 4df3_A           73 LPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVE----FAPRVMRDLLTVVRDRRNIFPIL-GDARFPEKYRHL-  144 (233)
T ss_dssp             CCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEE----CCHHHHHHHHHHSTTCTTEEEEE-SCTTCGGGGTTT-
T ss_pred             cCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEe----CCHHHHHHHHHhhHhhcCeeEEE-EeccCccccccc-
Confidence            56899999999988  557888889988774  788887    578877766432    2 12222 111111111111 


Q ss_pred             cCCCCccEEEECCCccc-----HHHHHhhccCCCeeC
Q 023007          257 ANLPEPALGFNCVGGNS-----ASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~~~-----~~~a~~~l~~~G~~v  288 (288)
                      .+  .+|+||.....+.     +..+.+.|+|+|+++
T Consensus       145 ~~--~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lv  179 (233)
T 4df3_A          145 VE--GVDGLYADVAQPEQAAIVVRNARFFLRDGGYML  179 (233)
T ss_dssp             CC--CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEE
T ss_pred             cc--eEEEEEEeccCChhHHHHHHHHHHhccCCCEEE
Confidence            11  4898886554322     366678999999974

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=94.92  E-value=0.029  Score=45.93  Aligned_cols=96  Identities=11%  Similarity=0.032  Sum_probs=59.5

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCC-C-CE--EEeCCcccHHHHHHHhcC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLG-A-DE--VFTESQLEVKNVKGLLAN  258 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g-~-~~--v~~~~~~~~~~i~~~~~~  258 (288)
                      ..++++++||-.|+ |. |..+..+++..| .+|+++.    .+++..+.+++.- . ..  ++..+.........+ .+
T Consensus        70 ~~~~~~~~VLDlGc-G~-G~~~~~la~~~~~~~v~gvD----~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~-~~  142 (230)
T 1fbn_A           70 MPIKRDSKILYLGA-SA-GTTPSHVADIADKGIVYAIE----YAPRIMRELLDACAERENIIPILGDANKPQEYANI-VE  142 (230)
T ss_dssp             CCCCTTCEEEEESC-CS-SHHHHHHHHHTTTSEEEEEE----SCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTT-SC
T ss_pred             cCCCCCCEEEEEcc-cC-CHHHHHHHHHcCCcEEEEEE----CCHHHHHHHHHHhhcCCCeEEEECCCCCccccccc-Cc
Confidence            45778999999998 44 888888898876 5788876    5777776664321 1 11  111111110000011 12


Q ss_pred             CCCccEEEECCCcc----c-HHHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCVGGN----S-ASKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~g~~----~-~~~a~~~l~~~G~~v  288 (288)
                        .+|+|+.....+    . +..+.+.|+|+|+++
T Consensus       143 --~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~  175 (230)
T 1fbn_A          143 --KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGM  175 (230)
T ss_dssp             --CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEE
T ss_pred             --cEEEEEEecCChhHHHHHHHHHHHhCCCCcEEE
Confidence              499999665543    2 477788999999874

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=94.89  E-value=0.045  Score=46.66  Aligned_cols=75  Identities=15%  Similarity=0.219  Sum_probs=45.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      +|||+|++|.+|...++.+...|++|+++.+......+.   +. -+... +..+-.+.+.+.+..... ++|+|+++.+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~---~~-~~~~~-~~~Dl~~~~~~~~~~~~~-~~d~vi~~a~   75 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKREN---VP-KGVPF-FRVDLRDKEGVERAFREF-RPTHVSHQAA   75 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGG---SC-TTCCE-ECCCTTCHHHHHHHHHHH-CCSEEEECCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhh---cc-cCeEE-EECCCCCHHHHHHHHHhc-CCCEEEECcc
Confidence            699999999999999998888899999887532111111   10 12222 211111223333333211 3999999987


Q ss_pred             c
Q 023007          271 G  271 (288)
Q Consensus       271 ~  271 (288)
                      .
T Consensus        76 ~   76 (311)
T 2p5y_A           76 Q   76 (311)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=94.85  E-value=0.027  Score=46.65  Aligned_cols=102  Identities=10%  Similarity=0.070  Sum_probs=58.6

Q ss_pred             hcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHHhCCCC---EEEeCCcccHHHHHHHhc
Q 023007          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLKGLGAD---EVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~i~~~~~  257 (288)
                      .....++++||=+|+  +.|..++.+++..  +.+++++......-+...+.++..|..   .++..+.  .+.+..+..
T Consensus        55 l~~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda--~~~l~~~~~  130 (242)
T 3r3h_A           55 LIRLTRAKKVLELGT--FTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA--LDTLHSLLN  130 (242)
T ss_dssp             HHHHHTCSEEEEEES--CCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH--HHHHHHHHH
T ss_pred             HHhhcCcCEEEEeeC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH--HHHHHHHhh
Confidence            344566789998887  4566777788865  578888874433233334455666653   2222222  122222211


Q ss_pred             --CCCCccEEEECCCccc----HHHHHhhccCCCeeC
Q 023007          258 --NLPEPALGFNCVGGNS----ASKVLKFLRFREEQW  288 (288)
Q Consensus       258 --~~g~~D~v~d~~g~~~----~~~a~~~l~~~G~~v  288 (288)
                        ..+.+|+||-......    ++.+.+.|+|||.++
T Consensus       131 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv  167 (242)
T 3r3h_A          131 EGGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIA  167 (242)
T ss_dssp             HHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEE
T ss_pred             ccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEE
Confidence              0125998775443322    377889999999874

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=94.84  E-value=0.036  Score=44.89  Aligned_cols=98  Identities=13%  Similarity=0.063  Sum_probs=60.3

Q ss_pred             hcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHHH----hCCCCE---EEeCCcccHHHHH
Q 023007          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKLK----GLGADE---VFTESQLEVKNVK  253 (288)
Q Consensus       183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~~----~~g~~~---v~~~~~~~~~~i~  253 (288)
                      .....++++||=+|+  +.|..++.+++..  +.+++++.    .+++..+.++    ..|...   ++..+.  .+.+.
T Consensus        59 l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD----~~~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~~  130 (225)
T 3tr6_A           59 LVKLMQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCD----VDEKSTALAKEYWEKAGLSDKIGLRLSPA--KDTLA  130 (225)
T ss_dssp             HHHHHTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEESCH--HHHHH
T ss_pred             HHHhhCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEe----CCHHHHHHHHHHHHHCCCCCceEEEeCCH--HHHHH
Confidence            344567789999988  3478888888876  56787776    5777766654    445432   222111  12333


Q ss_pred             HHhcC--CCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          254 GLLAN--LPEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~--~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      .+...  .+.+|+||-.....    .+..+.+.|+|||.++
T Consensus       131 ~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv  171 (225)
T 3tr6_A          131 ELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIA  171 (225)
T ss_dssp             HHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEE
T ss_pred             HhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            33321  02599988544432    2377789999999884

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=94.83  E-value=0.022  Score=48.01  Aligned_cols=31  Identities=10%  Similarity=0.150  Sum_probs=28.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +|||+|++|.+|...++.+...|++|+++.+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDK   37 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecc
Confidence            7999999999999999998888999999974

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=94.80  E-value=0.11  Score=45.25  Aligned_cols=83  Identities=10%  Similarity=0.081  Sum_probs=52.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|.+|.|+|. |.+|...++.++..|.+|++....    .++.+.+.+.|....      ..+.+..      ..|+|+.
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~----~~~~~~~~~~g~~~~------~l~e~l~------~aDvVi~  216 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGR----QPRPEEAAEFQAEFV------STPELAA------QSDFIVV  216 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESS----SCCHHHHHTTTCEEC------CHHHHHH------HCSEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCC----CcchhHHHhcCceeC------CHHHHHh------hCCEEEE
Confidence            4689999999 999999999999999999888743    323333445554321      1122211      2777777


Q ss_pred             CCCcc-----cH-HHHHhhccCCCee
Q 023007          268 CVGGN-----SA-SKVLKFLRFREEQ  287 (288)
Q Consensus       268 ~~g~~-----~~-~~a~~~l~~~G~~  287 (288)
                      ++...     .+ ...++.++++..|
T Consensus       217 ~vp~~~~t~~~i~~~~~~~mk~gail  242 (330)
T 2gcg_A          217 ACSLTPATEGLCNKDFFQKMKETAVF  242 (330)
T ss_dssp             CCCCCTTTTTCBSHHHHHHSCTTCEE
T ss_pred             eCCCChHHHHhhCHHHHhcCCCCcEE
Confidence            77542     11 3445666666544

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=94.77  E-value=0.075  Score=46.06  Aligned_cols=83  Identities=8%  Similarity=-0.040  Sum_probs=54.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc-CCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR-DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~-~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .|++|.|+|. |.+|...++.++..|++|++... .    .++ +...++|... .   + ..+.+.   .   ..|+|+
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~----~~~-~~~~~~g~~~-~---~-~l~ell---~---~aDvVi  207 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHR----ASS-SDEASYQATF-H---D-SLDSLL---S---VSQFFS  207 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSC----CCH-HHHHHHTCEE-C---S-SHHHHH---H---HCSEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCC----cCh-hhhhhcCcEE-c---C-CHHHHH---h---hCCEEE
Confidence            5789999999 99999999999999999988863 2    222 2344556531 1   1 122222   2   278888


Q ss_pred             ECCCcc-----cH-HHHHhhccCCCee
Q 023007          267 NCVGGN-----SA-SKVLKFLRFREEQ  287 (288)
Q Consensus       267 d~~g~~-----~~-~~a~~~l~~~G~~  287 (288)
                      .|+...     .+ ...++.++++..+
T Consensus       208 l~~p~~~~t~~~i~~~~l~~mk~gail  234 (320)
T 1gdh_A          208 LNAPSTPETRYFFNKATIKSLPQGAIV  234 (320)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTTEEE
T ss_pred             EeccCchHHHhhcCHHHHhhCCCCcEE
Confidence            887642     12 4466777777654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=94.74  E-value=0.019  Score=51.65  Aligned_cols=36  Identities=19%  Similarity=0.249  Sum_probs=31.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .++++|||+|++|.+|...+..+...|++|+++++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~  102 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRA  102 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEEC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECC
Confidence            456799999999999999888888889999999975

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=94.72  E-value=0.1  Score=47.63  Aligned_cols=95  Identities=12%  Similarity=0.049  Sum_probs=59.2

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccHHHHHHHhc
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~i~~~~~  257 (288)
                      ..+++|++||=.|+  +.|..++.+++.++  .+|+++.    .++++.+.++    .+|.. +..... +...+.....
T Consensus        97 L~~~~g~~VLDlga--GpG~kt~~LA~~~~~~g~V~AvD----is~~~l~~a~~n~~r~G~~-v~~~~~-Da~~l~~~~~  168 (464)
T 3m6w_A           97 LDPKPGERVLDLAA--APGGKTTHLAARMGGKGLLLANE----VDGKRVRGLLENVERWGAP-LAVTQA-PPRALAEAFG  168 (464)
T ss_dssp             HCCCTTCEEEESSC--TTCHHHHHHHHHTTTCSEEEEEC----SCHHHHHHHHHHHHHHCCC-CEEECS-CHHHHHHHHC
T ss_pred             cCcCCCCEEEEEcC--CcCHHHHHHHHhCCCCCEEEEEE----CCHHHHHHHHHHHHHcCCe-EEEEEC-CHHHhhhhcc
Confidence            45789999887766  45666777777764  4677765    5788876664    46665 322222 2223333223


Q ss_pred             CCCCccEEEE---CCCcc--------------------------cHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFN---CVGGN--------------------------SASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d---~~g~~--------------------------~~~~a~~~l~~~G~~v  288 (288)
                      +  .+|.|+-   |+|..                          .+..++++|+|||++|
T Consensus       169 ~--~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lv  226 (464)
T 3m6w_A          169 T--YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLV  226 (464)
T ss_dssp             S--CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred             c--cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            3  5998874   54421                          2367888999999985

>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E

Probab=94.72  E-value=0.26  Score=44.49  Aligned_cols=35  Identities=23%  Similarity=0.161  Sum_probs=31.7

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      --+|++|+|.|. |.+|..+++.+...|++++++.+
T Consensus       232 ~l~Gk~vaVQG~-GnVG~~aa~~L~e~GakvVavsD  266 (450)
T 4fcc_A          232 GFEGMRVSVSGS-GNVAQYAIEKAMEFGARVITASD  266 (450)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CcCCCEEEEeCC-ChHHHHHHHHHHhcCCeEEEEec
Confidence            346899999998 99999999999999999998875

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=94.71  E-value=0.44  Score=42.75  Aligned_cols=102  Identities=16%  Similarity=0.123  Sum_probs=61.7

Q ss_pred             HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHH-----------hCCC--CEE-
Q 023007          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLK-----------GLGA--DEV-  241 (288)
Q Consensus       177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~-----------~~g~--~~v-  241 (288)
                      +..+.....+++|++|+=+|+  +.|..++++++..|+. ++++.    .+++..+.++           .+|.  ..+ 
T Consensus       162 i~~il~~l~l~~gd~VLDLGC--GtG~l~l~lA~~~g~~kVvGID----iS~~~lelAr~n~e~frkr~~~~Gl~~~rVe  235 (438)
T 3uwp_A          162 VAQMIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVE----KADIPAKYAETMDREFRKWMKWYGKKHAEYT  235 (438)
T ss_dssp             HHHHHHHHCCCTTCEEEEESC--TTSHHHHHHHHHCCCSEEEEEE----CCHHHHHHHHHHHHHHHHHHHHHTBCCCEEE
T ss_pred             HHHHHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEe----CCHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence            344445578999999988887  6788888999888986 88887    4665444432           2343  333 


Q ss_pred             -EeCCcccHHHHHHHhcCCCCccEEEECCC--c----ccHHHHHhhccCCCeeC
Q 023007          242 -FTESQLEVKNVKGLLANLPEPALGFNCVG--G----NSASKVLKFLRFREEQW  288 (288)
Q Consensus       242 -~~~~~~~~~~i~~~~~~~g~~D~v~d~~g--~----~~~~~a~~~l~~~G~~v  288 (288)
                       +..+-.... ......   .+|+||-+.-  .    ..+...++.|+|||+||
T Consensus       236 fi~GD~~~lp-~~d~~~---~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIV  285 (438)
T 3uwp_A          236 LERGDFLSEE-WRERIA---NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIV  285 (438)
T ss_dssp             EEECCTTSHH-HHHHHH---TCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEE
T ss_pred             EEECcccCCc-cccccC---CccEEEEcccccCchHHHHHHHHHHcCCCCcEEE
Confidence             222211111 111112   3899884321  1    12355678999999986

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=94.71  E-value=0.072  Score=44.95  Aligned_cols=72  Identities=7%  Similarity=0.031  Sum_probs=47.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCC--C-EEEeCCcccHHHHHHHhcCCCCc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--D-EVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~--~-~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      -++++++|+|+ |++|.+++..+...|++++++.    ++.++.+.+ ++++.  . .+.+.     +   ++..  +.+
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~----R~~~~a~~l~~~~~~~~~~~~~~~-----~---~~~~--~~~  181 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLAN----RTFSKTKELAERFQPYGNIQAVSM-----D---SIPL--QTY  181 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEE----SSHHHHHHHHHHHGGGSCEEEEEG-----G---GCCC--SCC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHccccCCeEEeeH-----H---Hhcc--CCC
Confidence            36789999999 9999999998888998888887    466665443 34332  1 11111     1   1111  149


Q ss_pred             cEEEECCCccc
Q 023007          263 ALGFNCVGGNS  273 (288)
Q Consensus       263 D~v~d~~g~~~  273 (288)
                      |++|+|++...
T Consensus       182 DivIn~t~~~~  192 (272)
T 1p77_A          182 DLVINATSAGL  192 (272)
T ss_dssp             SEEEECCCC--
T ss_pred             CEEEECCCCCC
Confidence            99999998654

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=94.68  E-value=0.062  Score=50.31  Aligned_cols=34  Identities=15%  Similarity=0.306  Sum_probs=30.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      +.+|+|.|+ |++|..++..+.+.|...+.++|.+
T Consensus       327 ~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          327 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            479999999 9999999999999999888777654

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=94.66  E-value=0.18  Score=42.34  Aligned_cols=71  Identities=15%  Similarity=0.097  Sum_probs=48.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .+|.|+|+ |.+|.+.++.+...|.  +|+++.    .++++.+.+++.|.. .......       +....  ..|+||
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d----~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~--~aDvVi   67 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYD----INPESISKAVDLGIIDEGTTSIA-------KVEDF--SPDFVM   67 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEEC----SCHHHHHHHHHTTSCSEEESCGG-------GGGGT--CCSEEE
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEe----CCHHHHHHHHHCCCcccccCCHH-------HHhcC--CCCEEE
Confidence            37999998 9999999999998887  787775    577888888778763 2221110       11120  277888


Q ss_pred             ECCCcccH
Q 023007          267 NCVGGNSA  274 (288)
Q Consensus       267 d~~g~~~~  274 (288)
                      .|+.....
T Consensus        68 lavp~~~~   75 (281)
T 2g5c_A           68 LSSPVRTF   75 (281)
T ss_dssp             ECSCHHHH
T ss_pred             EcCCHHHH
Confidence            88776544

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=94.66  E-value=0.028  Score=45.73  Aligned_cols=95  Identities=11%  Similarity=0.039  Sum_probs=60.1

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCC-CEEEeCCcccHHHHHHHhcC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGA-DEVFTESQLEVKNVKGLLAN  258 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~-~~v~~~~~~~~~~i~~~~~~  258 (288)
                      ..++++++||=.|+ |..|..++.+++..+.+++++.    .+++..+.++    ..+. -.++..+...   ...+..+
T Consensus        51 ~~~~~~~~vLDlG~-G~~G~~~~~la~~~~~~v~~vD----~s~~~~~~a~~~~~~~~~~v~~~~~d~~~---~~~~~~~  122 (230)
T 3evz_A           51 TFLRGGEVALEIGT-GHTAMMALMAEKFFNCKVTATE----VDEEFFEYARRNIERNNSNVRLVKSNGGI---IKGVVEG  122 (230)
T ss_dssp             TTCCSSCEEEEECC-TTTCHHHHHHHHHHCCEEEEEE----CCHHHHHHHHHHHHHTTCCCEEEECSSCS---STTTCCS
T ss_pred             hhcCCCCEEEEcCC-CHHHHHHHHHHHhcCCEEEEEE----CCHHHHHHHHHHHHHhCCCcEEEeCCchh---hhhcccC
Confidence            44678999999988 5467777777777688998887    5777776664    3443 2233222111   1111122


Q ss_pred             CCCccEEEECCC--------------------------cccHHHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCVG--------------------------GNSASKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~g--------------------------~~~~~~a~~~l~~~G~~v  288 (288)
                        .+|+|+-+-.                          ...+..+.+.|+|+|+++
T Consensus       123 --~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~  176 (230)
T 3evz_A          123 --TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVA  176 (230)
T ss_dssp             --CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEE
T ss_pred             --ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEE
Confidence              5999885411                          123477888999999874

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=94.64  E-value=0.067  Score=46.93  Aligned_cols=34  Identities=15%  Similarity=0.098  Sum_probs=30.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHH-HcCCeEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIAR-HRGIHSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~-~~g~~vi~~~~  221 (288)
                      -.|++|.|+|. |.+|...++.++ ..|.+|++...
T Consensus       161 l~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~  195 (348)
T 2w2k_A          161 PRGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDV  195 (348)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS
T ss_pred             CCCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECC
Confidence            45789999999 999999999999 99999988764

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=94.63  E-value=0.12  Score=56.73  Aligned_cols=85  Identities=16%  Similarity=0.082  Sum_probs=51.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHH---HHHHHhCCCCEEEeC---Cc-ccHHHHHHHhcC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEA---KEKLKGLGADEVFTE---SQ-LEVKNVKGLLAN  258 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~---~~~~~~~g~~~v~~~---~~-~~~~~i~~~~~~  258 (288)
                      .++++++|+|++|++|.+.++.+...|++ ++.+.+.....++.   .+.+++.|....+..   .+ ..++.+.+....
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            46889999999999999999999999998 55555443223222   233344565433221   11 122222211111


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus      1962 ~g~id~lVnnAgv 1974 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMV 1974 (2512)
T ss_dssp             HSCEEEEEECCCC
T ss_pred             cCCCcEEEECCCc
Confidence            2359999999984

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.62  E-value=0.12  Score=43.68  Aligned_cols=73  Identities=21%  Similarity=0.255  Sum_probs=50.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      .+|.|+|++|.+|...+..+...|.+|+++.    .++++.+.+.+.|.+. .+..        +...   ..|+||.|+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~----r~~~~~~~~~~~g~~~-~~~~--------~~~~---~aDvVi~av   75 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIE----IAPEGRDRLQGMGIPL-TDGD--------GWID---EADVVVLAL   75 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEEC----CSHHHHHHHHHTTCCC-CCSS--------GGGG---TCSEEEECS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEE----CCHHHHHHHHhcCCCc-CCHH--------HHhc---CCCEEEEcC
Confidence            4799999999999999998888899988776    5777777777666432 1111        1111   278888888


Q ss_pred             CcccHHHHH
Q 023007          270 GGNSASKVL  278 (288)
Q Consensus       270 g~~~~~~a~  278 (288)
                      ........+
T Consensus        76 ~~~~~~~v~   84 (286)
T 3c24_A           76 PDNIIEKVA   84 (286)
T ss_dssp             CHHHHHHHH
T ss_pred             CchHHHHHH
Confidence            765554443

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.59  E-value=0.22  Score=42.54  Aligned_cols=46  Identities=15%  Similarity=0.030  Sum_probs=39.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      .+|.|+|. |.+|...+..+...|.+|++..    .++++.+.+.+.|...
T Consensus         8 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~d----r~~~~~~~~~~~g~~~   53 (303)
T 3g0o_A            8 FHVGIVGL-GSMGMGAARSCLRAGLSTWGAD----LNPQACANLLAEGACG   53 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCeEEEEE----CCHHHHHHHHHcCCcc
Confidence            57999999 9999999988888999999887    5788888888777654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=94.54  E-value=0.09  Score=45.23  Aligned_cols=33  Identities=18%  Similarity=0.244  Sum_probs=29.8

Q ss_pred             CCCeEEEeCC--CChHHHHHHHHHHHcCCeEEEEE
Q 023007          188 SGDSIVQNGA--TSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       188 ~g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .|++++|+|+  ++++|.+.++.+...|++|+++.
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~   42 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGT   42 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEe
Confidence            4789999998  89999999998888999999886

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=94.54  E-value=0.042  Score=47.88  Aligned_cols=83  Identities=10%  Similarity=0.046  Sum_probs=53.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .|++|.|+|. |.+|...++.++..|++|++....    .++.+....+|...    .  ..+.+.+      ..|+|+.
T Consensus       144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~----~~~~~~~~~~g~~~----~--~l~ell~------~aDvV~l  206 (330)
T 4e5n_A          144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAK----ALDTQTEQRLGLRQ----V--ACSELFA------SSDFILL  206 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSS----CCCHHHHHHHTEEE----C--CHHHHHH------HCSEEEE
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCC----CCcHhHHHhcCcee----C--CHHHHHh------hCCEEEE
Confidence            4789999999 999999999999999999988643    22233334445321    1  1222222      2778777


Q ss_pred             CCCcc-----cH-HHHHhhccCCCee
Q 023007          268 CVGGN-----SA-SKVLKFLRFREEQ  287 (288)
Q Consensus       268 ~~g~~-----~~-~~a~~~l~~~G~~  287 (288)
                      ++...     .+ ...++.|+++..|
T Consensus       207 ~~P~t~~t~~li~~~~l~~mk~gail  232 (330)
T 4e5n_A          207 ALPLNADTLHLVNAELLALVRPGALL  232 (330)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEE
T ss_pred             cCCCCHHHHHHhCHHHHhhCCCCcEE
Confidence            76531     22 4667777777655

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	288
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	7e-16
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	2e-12
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	1e-11
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	2e-11
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	6e-11
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	2e-10
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	3e-10
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	6e-10
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	6e-10
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	1e-09
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	1e-09
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	7e-08
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	9e-08
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	1e-07
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	6e-07
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	1e-06
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	9e-06
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	9e-06
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-05
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	2e-05
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-05
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	4e-05
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	9e-05
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-04
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	2e-04
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	2e-04
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-04
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	0.001
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	0.002
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	0.002
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	0.002
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	0.003
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	0.003
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	0.004

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (173), Expect = 7e-16
 Identities = 28/146 (19%), Positives = 56/146 (38%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +AV     G P+ +    ++     K++ V +K+ A  +NP +     G Y  +P +P  
Sbjct: 4   RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G +  G + +VG   +    GD V  S   SG +  Y +      +K+ +       + 
Sbjct: 64  PGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQ 123

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIVQ 194
             +  +          +  +G  I+ 
Sbjct: 124 YPLEKVAEAHENIIHGSGATGKMILL 149

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 62.1 bits (149), Expect = 2e-12
 Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 15/173 (8%)

Query: 48  SKAVVYEREGPPDSVIKM--IELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVR--- 102
           ++AV+Y + G P  V+     E+    +  N+V VK L +P+NPSDIN+I+GVYP +   
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 103 ------PKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHK 156
                  +  A  G EG+ EV  VGS V+ L  GDWVIPS  + GTW+++ + +   + K
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 157 VSKDSPMEYAATIIVNPLTALRMLED-FTTLNSGDSIVQNG-ATSIVGQCIIQ 207
               +P +  A    N LT  + +E  +        + Q+G A S  G+ +I 
Sbjct: 124 --LPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 60.4 bits (145), Expect = 1e-11
 Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 6/126 (4%)

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDS-IVQNGATSIVGQCIIQIARHRGIHSINIIR 221
           +   ATI VNPLTA  ML  +  L  G    +QNG TS VG+   QI +    +SI++IR
Sbjct: 3   INQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIR 62

Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG-----FNCVGGNSASK 276
           DR   DE    LK LGA +V TE Q   +     +    + + G      NCVGG S++ 
Sbjct: 63  DRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTG 122

Query: 277 VLKFLR 282
           + + L 
Sbjct: 123 IARKLN 128

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 59.1 bits (142), Expect = 2e-11
 Identities = 20/163 (12%), Positives = 53/163 (32%), Gaps = 8/163 (4%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A+  E+       + +  +   ++ ++ V +K+  + IN  D    +    +  + P +
Sbjct: 5   QALQAEKNADDV-SVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLI 63

Query: 109 GGYEGVG---EVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY 165
            G +  G          A                 G    Y          + ++  ++ 
Sbjct: 64  LGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKE 123

Query: 166 AATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQI 208
           A    +  +    +  +  T  +   I+QN      G+ I+++
Sbjct: 124 AMVDQLLTIVDREVSLE-ETPGALKDILQNRIQ---GRVIVKL 162

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 6e-11
 Identities = 37/193 (19%), Positives = 61/193 (31%), Gaps = 51/193 (26%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA V    G P   + + E+     K ++V +K++A  +  +D   + G  P     P 
Sbjct: 7   CKAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP-EGCFPV 62

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS--------------------------- 140
           + G+ G G V SVG  VT+L  GD VIP                                
Sbjct: 63  ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 122

Query: 141 --------------------GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
                                T+  Y V       K+     ++   T  ++     +  
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAF 182

Query: 181 EDFTTLNSGDSIV 193
           E   +  S  ++V
Sbjct: 183 ELMHSGKSIRTVV 195

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 56.1 bits (134), Expect = 2e-10
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 30/159 (18%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V    G P   +++ E+         V VK+ A+ +  +D++  EG +PV+P +P +
Sbjct: 7   KAAVVHAYGAP---LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFI 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSG--------------------------- 141
            G+EGVG V +VGS VTR+  GD V      +                            
Sbjct: 64  PGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNG 123

Query: 142 TWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
            +  YV+ D +    + K+         + +    L  +
Sbjct: 124 GYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM 162

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 55.3 bits (132), Expect = 3e-10
 Identities = 29/153 (18%), Positives = 48/153 (31%), Gaps = 10/153 (6%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A V  +         +  +   ++ E DV V++  + +N  D         +    P V
Sbjct: 5   QAFVVNKTETEF-TAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFV 63

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP-----PSSGTWQSYVVKDQSVWHKVSKDSPM 163
            G +  G V  V S   R   GD VI +         G +  Y          + K    
Sbjct: 64  PGIDLAGVV--VSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLER 121

Query: 164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG 196
             A  I +  L           L  G ++V+  
Sbjct: 122 I-AQEISLAELPQALKRILRGELR-GRTVVRLA 152

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 55.0 bits (131), Expect = 6e-10
 Identities = 38/185 (20%), Positives = 59/185 (31%), Gaps = 41/185 (22%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKV--P 106
            AV+Y      D  ++   +P  E KE++V ++M    I  SD++  E        V  P
Sbjct: 4   SAVLY---KQNDLRLEQRPIP--EPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDP 58

Query: 107 AVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSS-------------------------- 140
            V G+E  G V  VG  V  L  GD V   P                             
Sbjct: 59  MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 118

Query: 141 -GTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATS 199
            G    Y V      HK+  +  ++   T        +   E      + ++I       
Sbjct: 119 DGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFE-AARKKADNTIK------ 171

Query: 200 IVGQC 204
           ++  C
Sbjct: 172 VMISC 176

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 54.5 bits (130), Expect = 6e-10
 Identities = 20/137 (14%), Positives = 42/137 (30%), Gaps = 8/137 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           +A++ E++     +  +  L    + E DV V +  + +N  D   I G   +    P +
Sbjct: 2   QALLLEQQDGKT-LASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI 60

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP-----PSSGTWQSYVVKDQSVWHKVSKDSPM 163
            G +  G V +  S   R   G  V+ +         G               + +    
Sbjct: 61  PGIDFAGTVRT--SEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAA 118

Query: 164 EYAATIIVNPLTALRML 180
           +  +           + 
Sbjct: 119 KEISLSEAPNFAEAIIN 135

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 53.3 bits (127), Expect = 1e-09
 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 17/145 (11%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V +R G P   +++++LP  E +E +V +++ A  +N +D     G Y  R   P +
Sbjct: 2   KAWVLKRLGGP---LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAAT 168
            G E VG V                  +    G     V   +     + +  P+     
Sbjct: 59  PGMEVVGVVE------------GRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVF 106

Query: 169 IIVNPLTALRMLEDFTTLNSGDSIV 193
                  A R L      ++G  +V
Sbjct: 107 PFAEAEAAFRAL--LDRGHTGKVVV 129

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.8 bits (131), Expect = 1e-09
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 40/187 (21%)

Query: 44  MSPPS--KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV 101
           MS P   + +  +      +  K  +  P    ++D+ +K+ A  +  SDI+   G +  
Sbjct: 1   MSYPEKFEGIAIQSHEDWKN-PKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG- 58

Query: 102 RPKVPAVGGYEGVGEVYSVGSA-VTRLAPGDWV--------------------------- 133
             K+P V G+E VG+V  +G    + L  G  V                           
Sbjct: 59  NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFV 118

Query: 134 -------IPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTL 186
                       S G + +YV   +     + ++  +E           A   +E    +
Sbjct: 119 TTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEK-GDV 177

Query: 187 NSGDSIV 193
               ++V
Sbjct: 178 RYRFTLV 184

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 49.2 bits (116), Expect = 7e-08
 Identities = 35/169 (20%), Positives = 61/169 (36%), Gaps = 37/169 (21%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP----- 103
           +AV     G P   + + E+   + K   V +K+ AA +  SD++  +G +         
Sbjct: 2   RAVRLVEIGKP---LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 104 --KVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPS---------------------- 139
             K+P   G+E  G++  VG  V   + GD V  +P                        
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 140 ----SGTWQSY-VVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDF 183
                G +  Y +V      +K+ +  PM      +     A+  LE+F
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENF 167

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 49.1 bits (116), Expect = 9e-08
 Identities = 32/193 (16%), Positives = 60/193 (31%), Gaps = 51/193 (26%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA V      P   + + E+       N++ +K++A  +  +D+  +      +   P 
Sbjct: 9   CKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLF-EGKHKDGFPV 64

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSP------------------------------ 137
           V G+EG G V SVG  VT   PG+ VIP                                
Sbjct: 65  VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124

Query: 138 -----------------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML 180
                              + T+  Y V +Q    K+     ++   T  +   +    +
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAI 184

Query: 181 EDFTTLNSGDSIV 193
           +         +++
Sbjct: 185 DLMKHGKCIRTVL 197

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 47.7 bits (112), Expect = 1e-07
 Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 5/148 (3%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
           +  + + + G P+ V++ +E  P +  EN++ V+  A  IN  D     G+YP  P +P+
Sbjct: 1   ATRIEFHKHGGPE-VLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPS 58

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY-- 165
             G E  G V  VGS V  +  GD V+ +  + G + S           +     ++   
Sbjct: 59  GLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAE 118

Query: 166 AATIIVNPLTALRMLEDFTTLNSGDSIV 193
                +        + + +    G S++
Sbjct: 119 QQKYPLKDAQRAHEILE-SRATQGSSLL 145

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 46.5 bits (109), Expect = 6e-07
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KA V E+   P   +K+ E+    +   +V V++ A  +  +D++   G +PV+PK+P +
Sbjct: 2   KAAVVEQFKEP---LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPP 138
            G+EGVG V  VG  VT L  GD V     
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWL 88

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA V   E  P     + E+     K ++V +KM+A  I  SD + + G       V A
Sbjct: 9   CKAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIA 65

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 155
              +E  G V S+G  VT + PGD VIP               +  + 
Sbjct: 66  G--HEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFC 111

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 42.7 bits (100), Expect = 9e-06
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 18/153 (11%)

Query: 48  SKAVVYER--EGPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPK 104
           +K+   ++  +G P  S  ++  +    +K  +V ++ L   ++P            R K
Sbjct: 4   AKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-----ASKRLK 58

Query: 105 VPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPME 164
             AV   + V  V  V S  +    G  V+    +   W ++ + D     K+  + P +
Sbjct: 59  EGAVMMGQQVARV--VESKNSAFPAGSIVL----AQSGWTTHFISDGKGLEKLLTEWPDK 112

Query: 165 YAATIIVNPLTALRMLEDFTTL----NSGDSIV 193
                         M   F  +    N G ++V
Sbjct: 113 KIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 145

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 43.3 bits (101), Expect = 9e-06
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA +  + G P   I+ IE+     K  +V ++++A  + P+DIN  +        V  
Sbjct: 9   CKAAIAWKTGSPL-CIEEIEVS--PPKACEVRIQVIATCVCPTDINATDPKKKALFPVVL 65

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIP 135
              +E  G V SVG  VT   PGD VIP
Sbjct: 66  G--HECAGIVESVGPGVTNFKPGDKVIP 91

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 28/208 (13%), Positives = 56/208 (26%), Gaps = 51/208 (24%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVE-----VKENDVCVKMLAAPINPSDINRIEGVYPVR 102
           ++ VVY   G     ++ I+ P ++       E+ V +K+++  I  SD + + G    +
Sbjct: 2   NRGVVYL--GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQ 59

Query: 103 PKVPAVGGYEGVG----------------------------------EVYSVGSAVTRLA 128
             +       G                                        +     R  
Sbjct: 60  VGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAG 119

Query: 129 PGDWVIPSPPSSGTWQSYVV---KDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTT 185
                +     +G    YV+    D ++     +D  ME    I       +  L+D   
Sbjct: 120 GAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAME-KINIAEVVGVQVISLDD--- 175

Query: 186 LNSGDSIVQNGATSIVGQCIIQIARHRG 213
              G      G      + +I   +   
Sbjct: 176 APRGYGEFDAGV---PKKFVIDPHKTFS 200

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 38/183 (20%)

Query: 41  SALMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSD--INRIEGV 98
           +A   P + ++V    GP D  ++   +P  E   N+V ++M +  I  SD        +
Sbjct: 1   AAAAKPNNLSLVVH--GPGDLRLENYPIP--EPGPNEVLLRMHSVGICGSDVHYWEYGRI 56

Query: 99  YPVRPKVPAVGGYEGVGEVYSVGSAVTRLAPGDWVIPSP--------------------- 137
                K P V G+E  G V  VGS+V  L PGD V   P                     
Sbjct: 57  GNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSI 116

Query: 138 ------PSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNP-LTALRMLEDFTTLNSGD 190
                 P  G    +   + +  +K+  +          +   L A    +       G 
Sbjct: 117 FFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALEAFETFK----KGLGL 172

Query: 191 SIV 193
            I+
Sbjct: 173 KIM 175

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 3e-05
 Identities = 15/114 (13%), Positives = 28/114 (24%), Gaps = 5/114 (4%)

Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
           P++    +     T      +   L  G      G   +    I+          I +  
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD- 60

Query: 222 DRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA-LGFNCVGGNSA 274
               + +   + K  GA E            + L+          F C+G    
Sbjct: 61  ---INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKV 111

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 41.4 bits (96), Expect = 4e-05
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 48  SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPA 107
            KA V      P   + +  +     K ++V +K+LA+ I  SD + ++ + P +  V  
Sbjct: 9   CKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVI- 64

Query: 108 VGGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSY 146
             G+E VG V S+G+ VT + PGD VIP           
Sbjct: 65  -LGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRA 102

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 40.0 bits (92), Expect = 9e-05
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK 234
            ++  LE         S++  GAT  VG   + +   RG   +        + EA + LK
Sbjct: 10  LSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTG----NREAADYLK 65

Query: 235 GLGAD 239
            LGA 
Sbjct: 66  QLGAS 70

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 38/191 (19%), Positives = 65/191 (34%), Gaps = 27/191 (14%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
            A V   +G      ++  L   + + ++V VK++A  +  +D+   +  YPV    PAV
Sbjct: 5   IAAVTPCKGAD---FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL--PAV 59

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPP----------------SSGTWQSYVVKDQS 152
            G+EG G + ++G  VT L  GD V+ S                  S    +++   D  
Sbjct: 60  LGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSE 119

Query: 153 VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLN------SGDSIVQNGATSIVGQCII 206
             H +                  A   L               D +V+  A   + Q  I
Sbjct: 120 GNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAI 179

Query: 207 QIARHRGIHSI 217
              +   +  I
Sbjct: 180 DSRKGITLKPI 190

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 44  MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP 103
           M   + A+V E+   P   +   E    ++    + V++L+A +  SD++   G  P R 
Sbjct: 1   MGLKAHAMVLEKFNQP---LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP-RV 56

Query: 104 KVPAVGGYEGVGEVYSVGSAVTRLAPGDW 132
            +P + G+EG G V  V      L     
Sbjct: 57  PLPIILGHEGAGRVVEVNGEKRDLNGELL 85

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 12/53 (22%), Positives = 19/53 (35%)

Query: 163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH 215
            E AA   +  LT   +L     +   +  + + A   VG    Q A+  G  
Sbjct: 3   FEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK 55

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 15/82 (18%), Positives = 24/82 (29%), Gaps = 4/82 (4%)

Query: 161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220
           SP+E    I     T          +  G +    G   +    I+      G   I  +
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK-AAGAARIIGV 59

Query: 221 RDRAGSDEAKEKLKGLGADEVF 242
                + +   K K +GA E  
Sbjct: 60  D---INKDKFAKAKEVGATECV 78

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 162 PMEYA-ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII 220
           P+  A  TI +  LTA   L +   +  G++++ + A   VG  + QIA+ +G   +   
Sbjct: 2   PLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAA 61

Query: 221 RDRAGSDEAK 230
                    K
Sbjct: 62  GSDEKIAYLK 71

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 34.2 bits (78), Expect = 0.002
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 7/79 (8%)

Query: 163 MEYAATIIVNPLTA---LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINI 219
              A  I     TA   +  LED         IV  GA+  VG   + +    G   + +
Sbjct: 3   ARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAV 62

Query: 220 IRDRAGSDEAKEKLKGLGA 238
               +G +   E LK LGA
Sbjct: 63  ----SGRESTHEYLKSLGA 77

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 36.2 bits (82), Expect = 0.002
 Identities = 17/58 (29%), Positives = 25/58 (43%)

Query: 164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
             AAT  V  LTA   L +   L+ G+ ++ + AT  VG   + IA+  G        
Sbjct: 1   NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG 58

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 36.1 bits (82), Expect = 0.002
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 4/107 (3%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           KAV       P   ++ +++   E   NDV +++    +  SD++++   +         
Sbjct: 2   KAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 58

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWH 155
           G    VG V +VG  V + APGD V               +D    +
Sbjct: 59  GHEI-VGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENY 104

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 35.7 bits (81), Expect = 0.003
 Identities = 26/89 (29%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 49  KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAV 108
           K             +  IE         D  V+ LA     SDI+ +        K   +
Sbjct: 2   KGFAMLGINK----LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRK-NMI 56

Query: 109 GGYEGVGEVYSVGSAVTRLAPGDWVIPSP 137
            G+E VGEV  VGS V    PGD VI   
Sbjct: 57  LGHEAVGEVVEVGSEVKDFKPGDRVIVPC 85

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 35.4 bits (80), Expect = 0.003
 Identities = 10/81 (12%), Positives = 24/81 (29%), Gaps = 4/81 (4%)

Query: 162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR 221
           P++    +     T      +   +  G +    G  ++    ++          I +  
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 222 DRAGSDEAKEKLKGLGADEVF 242
           +     +  EK K  GA +  
Sbjct: 62  N----PDKFEKAKVFGATDFV 78

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.4 bits (80), Expect = 0.004
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 165 YAATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 222
           +   I +  LT+L  +++   +++G   ++V +GA    G    QI    G   +  I  
Sbjct: 5   FLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG 64

Query: 223 R 223
            
Sbjct: 65  T 65

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	288
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.97
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.96
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.95
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.93
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.93
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.93
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.93
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.92
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.92
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.92
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.91
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.9
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.9
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.88
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.88
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.88
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.87
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.86
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.86
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.85
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.85
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.84
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.83
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.83
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.82
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.82
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.82
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.81
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.81
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.8
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.8
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.8
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.79
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.79
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.79
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.78
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.78
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.74
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.72
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.57
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.17
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.13
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.88
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.83
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.82
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.8
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.76
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.75
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.71
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.7
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.68
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.65
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.64
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.64
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.63
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.63
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.63
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.62
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.61
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.61
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.6
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.6
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.58
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.58
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.58
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.56
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.56
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.55
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.55
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.54
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.53
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.53
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.52
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.5
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.48
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.48
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.46
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.46
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.45
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.44
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.43
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.42
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.41
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.4
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.38
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.37
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.37
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.37
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.3
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.29
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.28
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.27
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.24
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.24
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.23
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.22
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.22
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.2
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.19
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.18
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.16
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.08
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.05
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.03
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	96.98
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	96.96
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.93
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.92
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.9
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.81
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.79
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.76
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.74
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.73
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.73
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.71
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.7
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.69
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.69
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.68
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.67
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.64
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.6
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	96.58
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.51
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.5
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.46
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.42
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.42
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.41
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.39
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.35
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.31
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.22
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	96.18
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	96.17
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.15
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.1
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.09
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.07
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.0
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	95.8
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	95.78
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.78
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	95.72
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.68
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.65
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.61
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	95.59
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	95.59
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	95.56
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.56
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	95.46
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.46
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.44
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	95.38
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.36
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.25
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.23
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	95.22
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.22
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.2
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.13
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	95.12
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.93
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	94.71
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.65
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	94.61
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	94.6
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.56
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	94.46
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.44
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.43
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.38
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.22
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	94.08
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.07
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	94.07
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.99
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	93.94
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	93.87
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.83
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.81
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.79
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.7
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.56
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.54
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.47
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.38
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.37
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.36
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.32
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	93.31
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.22
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	93.18
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	93.06
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	93.06
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.03
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.96
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	92.92
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	92.72
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.69
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	92.63
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.59
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	92.49
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.45
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.32
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	92.3
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.28
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	92.22
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.07
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.97
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.95
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.92
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.86
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.83
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	91.79
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.75
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.63
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	91.5
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	91.42
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.41
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.41
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.41
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	91.27
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.26
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	91.24
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	91.22
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	91.2
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.17
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.9
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	90.9
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	90.81
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	90.69
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	90.67
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	90.58
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.54
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.49
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	90.39
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	90.3
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	89.96
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	89.95
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	89.58
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.52
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	89.49
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	89.43
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.4
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.38
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	89.35
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	89.33
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.32
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.25
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	89.23
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.17
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	89.16
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	88.98
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	88.66
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.18
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	88.06
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	88.02
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.96
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.87
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	87.81
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	87.76
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	87.66
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	87.56
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	87.56
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	87.36
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	87.13
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	87.03
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	86.96
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	86.95
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	86.76
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	86.6
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	86.41
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.37
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	86.31
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	86.28
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	86.21
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	85.93
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	85.9
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	85.89
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	85.78
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	85.77
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	85.53
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	85.43
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	85.42
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	85.06
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.01
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	84.83
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	84.77
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	84.77
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	84.75
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	84.63
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.59
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	84.46
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	84.25
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.19
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	84.06
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	84.02
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	83.96
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	83.84
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	83.63
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	83.33
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.03
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	82.97
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	82.8
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.58
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	82.4
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	82.17
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	81.89
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	81.73
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	81.58
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	81.54
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	81.49
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	81.42
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	81.41
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	81.35
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	80.98
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	80.78
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	80.74
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	80.73
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	80.5
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	80.44
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	80.31

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.6e-31  Score=205.10  Aligned_cols=148  Identities=20%  Similarity=0.270  Sum_probs=137.7

Q ss_pred             cceEEEEccCCCCCcceEEE-EcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMI-ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~-~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      .||+++++++|+++ +++++ +.+.|++.++||+|||.++++|++|.+.+.|.++....+|.++|||++|+|+++|++++
T Consensus         2 ~MkAv~~~~~G~p~-~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~   80 (150)
T d1yb5a1           2 LMRAVRVFEFGGPE-VLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNAS   80 (150)
T ss_dssp             EEEEEEESSCSSGG-GEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCT
T ss_pred             ceeEEEEEccCCcc-eEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceee
Confidence            58999999998875 47765 68999999999999999999999999999998877778899999999999999999999


Q ss_pred             CCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEe
Q 023007          126 RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (288)
Q Consensus       126 ~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  195 (288)
                      +|++||+|++.....|+|+||+.++++.++++|+++++.+|+++++..+|+|+.+...+..+.|+++||+
T Consensus        81 ~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          81 AFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ccccCccccccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999887789999999999999999999999999999999999999999988999999999984

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=8.1e-30  Score=204.20  Aligned_cols=148  Identities=26%  Similarity=0.350  Sum_probs=132.2

Q ss_pred             CCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      ++|.||||++++++|.+   ++++++|.|.++++||+||+.++++|++|.+.+.|.++....+|.++|||++|+|+++|+
T Consensus         1 ~~P~tMkA~v~~~~g~p---l~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~   77 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAP---LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGS   77 (175)
T ss_dssp             CCCSEEEEEEBCSTTSC---CEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECT
T ss_pred             CcchhcEEEEEEeCCCC---CEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCC
Confidence            47889999999999876   789999999999999999999999999999999998877667899999999999999999


Q ss_pred             CCCCCCCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHH
Q 023007          123 AVTRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLT  175 (288)
Q Consensus       123 ~~~~~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~t  175 (288)
                      ++++|++||+|+..+.                           .+|+|+||+.+++++++++|+++++..++++..++.|
T Consensus        78 ~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t  157 (175)
T d1llua1          78 GVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQ  157 (175)
T ss_dssp             TCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHH
T ss_pred             CccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHH
Confidence            9999999999986421                           1579999999999999999999999888888888889


Q ss_pred             HHHHHHhhcCCCCCCeEEEe
Q 023007          176 ALRMLEDFTTLNSGDSIVQN  195 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~  195 (288)
                      +++.++. + ..+|++|||+
T Consensus       158 ~~~~~~~-g-~~~G~~VLVl  175 (175)
T d1llua1         158 ILDQMRA-G-QIEGRIVLEM  175 (175)
T ss_dssp             HHHHHHT-T-CCSSEEEEEC
T ss_pred             HHHHHHh-C-CCCCCEEEeC
Confidence            9988753 3 4479999985

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=1.4e-29  Score=203.37  Aligned_cols=143  Identities=24%  Similarity=0.273  Sum_probs=125.9

Q ss_pred             EEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC--CCCCCCcccccceEEEEEEecCCCCCC
Q 023007           50 AVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        50 a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      +++++++++    ++++++|.|+++++||+||+.+++||++|++.+.+...  ...+.|.++|||++|+|+++|+++++|
T Consensus         4 aAVl~g~~~----l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~   79 (178)
T d1e3ja1           4 SAVLYKQND----LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHL   79 (178)
T ss_dssp             EEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSC
T ss_pred             EEEEEcCCc----EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCC
Confidence            445666654    99999999999999999999999999999998876432  223568899999999999999999999


Q ss_pred             CCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|+..+.                           .+|+|+||+++|+++++++|+++++++++.++.++.|+|+++
T Consensus        80 ~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~  159 (178)
T d1e3ja1          80 KKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF  159 (178)
T ss_dssp             CTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHH
T ss_pred             CCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHH
Confidence            99999987531                           258999999999999999999999999999999999999998


Q ss_pred             HhhcCCCCCCeEEEeCC
Q 023007          181 EDFTTLNSGDSIVQNGA  197 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~  197 (288)
                      . .+++++|++|+|+|+
T Consensus       160 ~-~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         160 E-AARKKADNTIKVMIS  175 (178)
T ss_dssp             H-HHHHCCTTCSEEEEE
T ss_pred             H-HhCCCCCCEEEEEcc
Confidence            6 489999999999986

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3.8e-28  Score=188.82  Aligned_cols=143  Identities=22%  Similarity=0.336  Sum_probs=126.8

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCCC
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRLA  128 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~  128 (288)
                      +.+.++++|.+ +++++++.+.|++.++||+|||.++++|++|++++.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~i~~~~~G~p-e~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   79 (147)
T d1qora1           2 TRIEFHKHGGP-EVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSKVGSGVKHIK   79 (147)
T ss_dssp             EEEEBSSCCSG-GGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             eEEEEcccCCC-ceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCC-Ccceeeeccccccceeeeeeeccccc
Confidence            46888999988 46999999999999999999999999999999999998765 47889999999999999999999999


Q ss_pred             CCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhh--hcccccchHHHHHHHHhhcCCCCCCeEEE
Q 023007          129 PGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEY--AATIIVNPLTALRMLEDFTTLNSGDSIVQ  194 (288)
Q Consensus       129 ~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~--aa~l~~~~~ta~~~l~~~~~~~~g~~vlI  194 (288)
                      +||+|+......|+|++|.+++.+.++++|+++++.+  +++++....++++++.+ .++++|++|||
T Consensus        80 vGdrV~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          80 AGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             TTCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             ccceeeeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            9999987666679999999999999999999998774  45556666778888766 68999999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=2.8e-28  Score=198.98  Aligned_cols=147  Identities=22%  Similarity=0.236  Sum_probs=133.5

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      +.++||+++++++.+   ++++|++.|+++++||+||+.++++|++|++.+.+.... ..+|.++|||++|+|+++|+++
T Consensus         6 ~~~~kAav~~~~~~p---l~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~-~~~p~i~GhE~~G~v~~vG~~v   81 (199)
T d1cdoa1           6 VIKCKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGV   81 (199)
T ss_dssp             CEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTC
T ss_pred             ceEEEEEEEecCCCC---cEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccc-cccccccccccceEEEEEcCCC
Confidence            345689999999876   889999999999999999999999999999999886543 3679999999999999999999


Q ss_pred             CCCCCCCEEEecCCC-----------------------------------------------CcccceEEEeeCCcEEEc
Q 023007          125 TRLAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHKV  157 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~~-----------------------------------------------~G~~a~~~~~~~~~l~~i  157 (288)
                      ++|++||+|+..+..                                               .|+|+||++++.+.++++
T Consensus        82 ~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~i  161 (199)
T d1cdoa1          82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (199)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             ceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEEC
Confidence            999999999886431                                               289999999999999999


Q ss_pred             CCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEe
Q 023007          158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (288)
Q Consensus       158 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  195 (288)
                      |+++++++++++.+++.|+++++......+.|++|||+
T Consensus       162 P~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         162 DPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999999999999998999999999985

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=6.1e-28  Score=192.46  Aligned_cols=143  Identities=25%  Similarity=0.363  Sum_probs=123.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      |||+++++++++   +++++++.|++.++||+|||.+++||++|++.+.+........|.++|||++|+|+++|++++++
T Consensus         1 MkA~v~~~~g~p---l~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~   77 (171)
T d1rjwa1           1 MKAAVVEQFKEP---LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHL   77 (171)
T ss_dssp             CEEEEBSSTTSC---CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSC
T ss_pred             CeEEEEecCCCC---cEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCc
Confidence            899999998876   88999999999999999999999999999999988766666889999999999999999999999


Q ss_pred             CCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|+..+.                           .+|+|+||+++++++++++|++++++.|+ +. ...++++.+
T Consensus        78 ~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~~~  155 (171)
T d1rjwa1          78 KVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFDRM  155 (171)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHHHH
T ss_pred             eeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHHHH
Confidence            99999976431                           15899999999999999999999986654 33 456777776


Q ss_pred             HhhcCCCCCCeEEEeCC
Q 023007          181 EDFTTLNSGDSIVQNGA  197 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~  197 (288)
                      .+ +.+ +|++|||+|.
T Consensus       156 ~~-~~~-~G~tVlViG~  170 (171)
T d1rjwa1         156 LK-GQI-NGRVVLTLED  170 (171)
T ss_dssp             HT-TCC-SSEEEEECCC
T ss_pred             Hh-cCC-CCCEEEEeCC
Confidence            54 555 5999999985

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=4.2e-28  Score=184.27  Aligned_cols=131  Identities=26%  Similarity=0.338  Sum_probs=121.3

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||+++++++|++   +++++.+.|+++++||+||+.++++|++|.+.+.|.++....+|.++|||++|+|          
T Consensus         1 MkA~~~~~~G~~---l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP---LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV----------   67 (131)
T ss_dssp             CEEEEECSTTSC---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE----------
T ss_pred             CcEEEEccCCCC---CEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee----------
Confidence            799999999876   8999999999999999999999999999999999988777789999999999999          


Q ss_pred             CCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEe
Q 023007          128 APGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (288)
Q Consensus       128 ~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  195 (288)
                       +||+|+++.. .|+|+||++++++.++++|+++++++|+++++.+.|||+++.+.+  +.|++||++
T Consensus        68 -vGd~V~~~~~-~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          68 -EGRRYAALVP-QGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             -TTEEEEEECS-SCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             -ccceEEEEec-cCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence             4999999876 599999999999999999999999999999999999999998765  459999874

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.95  E-value=8e-28  Score=191.56  Aligned_cols=141  Identities=23%  Similarity=0.348  Sum_probs=125.8

Q ss_pred             eEEEEccCCCCCcceEEEEcCCCCC-CCCeEEEEEeEEecChHHHHHHhCCCCC--CCCCCcccccceEEEEEEecCCCC
Q 023007           49 KAVVYEREGPPDSVIKMIELPPVEV-KENDVCVKMLAAPINPSDINRIEGVYPV--RPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        49 ~a~~~~~~g~~~~~~~~~~~~~p~~-~~~evlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      ||++++++|.+   +++++++.|++ .++||+||+.+++||++|++.+.|..+.  .+.+|.++|||++|+|+++|++++
T Consensus         1 kA~~~~~~g~p---l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~   77 (171)
T d1h2ba1           1 KAARLHEYNKP---LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVE   77 (171)
T ss_dssp             CEEEESSTTSC---CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CEEEEEeCCCC---CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCC
Confidence            68999999987   88999999985 6899999999999999999999886532  235789999999999999999999


Q ss_pred             CCCCCCEEEecCCC--------------------------CcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHH
Q 023007          126 RLAPGDWVIPSPPS--------------------------SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRM  179 (288)
Q Consensus       126 ~~~~Gd~V~~~~~~--------------------------~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~  179 (288)
                      +|++||||+..+..                          +|+|+||++++.+.++++|++++++.++++..++.|+|++
T Consensus        78 ~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~a  157 (171)
T d1h2ba1          78 GLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLER  157 (171)
T ss_dssp             SCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHH
T ss_pred             cCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHH
Confidence            99999999876421                          5899999999999999999999998888888899999999


Q ss_pred             HHhhcCCCCCCeEEE
Q 023007          180 LEDFTTLNSGDSIVQ  194 (288)
Q Consensus       180 l~~~~~~~~g~~vlI  194 (288)
                      +.. +++ .|++|||
T Consensus       158 l~~-~~~-~G~~VlI  170 (171)
T d1h2ba1         158 LEK-GEV-LGRAVLI  170 (171)
T ss_dssp             HHT-TCC-SSEEEEE
T ss_pred             HHh-cCC-CCCEEEe
Confidence            965 777 8999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=3.5e-28  Score=190.02  Aligned_cols=146  Identities=20%  Similarity=0.129  Sum_probs=129.9

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      .+|||+++++++++. .+++++.+.|++++|||+|||.++++|++|++.+.|.++.....|.++|+|++|+|++  ..+.
T Consensus         2 ~~~KA~v~~~~~~~~-~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~   78 (152)
T d1xa0a1           2 SAFQAFVVNKTETEF-TAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHP   78 (152)
T ss_dssp             CEEEEEEEEEETTEE-EEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSS
T ss_pred             CceEEEEEEecCCce-EEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCC
Confidence            478999999988763 3678899999999999999999999999999998888777667899999999999998  6677


Q ss_pred             CCCCCCEEEecCCC-----CcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeC
Q 023007          126 RLAPGDWVIPSPPS-----SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG  196 (288)
Q Consensus       126 ~~~~Gd~V~~~~~~-----~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g  196 (288)
                      +|++||+|+.....     +|+|+||+++|++.++++|++++. +|++++++++|+|..+...++++ |++|||+|
T Consensus        79 ~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          79 RFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             SCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             ccccCCEEEEecCccccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            89999999877542     689999999999999999999984 78889999999999988888886 99999986

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=1.8e-27  Score=193.52  Aligned_cols=147  Identities=25%  Similarity=0.273  Sum_probs=132.9

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      ..+|||+++++++.+   ++++++|.|+|+++||||||.+++||++|++++.|.+.. ..+|.++|||++|+|+++|+++
T Consensus         4 ~~~~kAav~~~~g~~---l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~-~~~p~v~GhE~~G~V~~vG~~V   79 (197)
T d2fzwa1           4 VIKCKAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVESVGEGV   79 (197)
T ss_dssp             CEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT-CCSSBCCCCEEEEEEEEECTTC
T ss_pred             ceEEEEEEEccCCCC---CEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCccc-ccccccCCcceeeEEEeecCCc
Confidence            346899999999987   899999999999999999999999999999999987654 3689999999999999999999


Q ss_pred             CCCCCCCEEEecCCC-----------------------------------------------CcccceEEEeeCCcEEEc
Q 023007          125 TRLAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHKV  157 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~~-----------------------------------------------~G~~a~~~~~~~~~l~~i  157 (288)
                      +++++||+|+..+..                                               .|+|+||+++++..++++
T Consensus        80 ~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~v  159 (197)
T d2fzwa1          80 TKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI  159 (197)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             eecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEEC
Confidence            999999999875321                                               289999999999999999


Q ss_pred             CCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEe
Q 023007          158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (288)
Q Consensus       158 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  195 (288)
                      |+++++++++.+.+++.|++.++......+.+++|||+
T Consensus       160 p~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         160 DPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             CTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99999999999999999999998776777889999985

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=1.2e-27  Score=195.85  Aligned_cols=145  Identities=25%  Similarity=0.307  Sum_probs=129.5

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      -+.+|||+++++++.+   ++++|+|.|+|+++||||||.+++||++|++.+.|.++.  .+|.++|||++|+|+++|++
T Consensus         5 ~~~~~KAaV~~~~g~p---l~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~--~~P~v~GHE~~G~V~~vG~~   79 (202)
T d1e3ia1           5 KVIKCKAAIAWKTGSP---LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA--LFPVVLGHECAGIVESVGPG   79 (202)
T ss_dssp             SCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCC--CSSBCCCCEEEEEEEEECTT
T ss_pred             CeEEEEEEEEccCCCC---CEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeeccc--ccccccccccceEEeeecCC
Confidence            3568999999999876   889999999999999999999999999999999987664  56999999999999999999


Q ss_pred             CCCCCCCCEEEecCCC---------------------------------------------------CcccceEEEeeCC
Q 023007          124 VTRLAPGDWVIPSPPS---------------------------------------------------SGTWQSYVVKDQS  152 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~~---------------------------------------------------~G~~a~~~~~~~~  152 (288)
                      ++++++||+|+..+..                                                   .|+|+||+++++.
T Consensus        80 V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~  159 (202)
T d1e3ia1          80 VTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEA  159 (202)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             ceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehh
Confidence            9999999999875421                                                   2899999999999


Q ss_pred             cEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeC
Q 023007          153 VWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG  196 (288)
Q Consensus       153 ~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g  196 (288)
                      .++++|++++++.++++.+++.+.+.++..   +++|++|.|+.
T Consensus       160 ~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         160 NLARVDDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             GEEECCTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             hEEECCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence            999999999999999999889999888865   57899998763

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2e-27  Score=192.32  Aligned_cols=150  Identities=19%  Similarity=0.181  Sum_probs=128.0

Q ss_pred             CCCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecC
Q 023007           43 LMSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGS  122 (288)
Q Consensus        43 ~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~  122 (288)
                      +.|.+||++.+.++++... +++++.+.++++++||+||+.++|||++|++.+.|..+. .++|.++|||++|+|+++|+
T Consensus         2 ~~P~~~ka~~~~~~~~~~~-~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~-~~~P~i~GHE~~G~Vv~vG~   79 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKN-PKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGKVVKLGP   79 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTS-CEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEEEEEECT
T ss_pred             CCCceeEEEEEeCCCcCCc-ceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCC-CCCCcCcccccccchhhccc
Confidence            3578999999999987654 677777766689999999999999999999999987654 37899999999999999999


Q ss_pred             CC-CCCCCCCEEEecCC----------------------------------CCcccceEEEeeCCcEEEcCCCCChhhhc
Q 023007          123 AV-TRLAPGDWVIPSPP----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAA  167 (288)
Q Consensus       123 ~~-~~~~~Gd~V~~~~~----------------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa  167 (288)
                      ++ +.+++||||...+.                                  .+|+|+||+++++++++++|++++++.|+
T Consensus        80 ~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aa  159 (192)
T d1piwa1          80 KSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLP  159 (192)
T ss_dssp             TCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEE
T ss_pred             ccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHH
Confidence            87 66999999964321                                  15899999999999999999999998877


Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEe
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~  195 (288)
                      .+...+.|||+++. .+++++|++|+|.
T Consensus       160 l~~~~~~ta~~~l~-~~~vk~g~~Vvv~  186 (192)
T d1piwa1         160 VGEAGVHEAFERME-KGDVRYRFTLVGY  186 (192)
T ss_dssp             SSHHHHHHHHHHHH-HTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHH-HhCCCCCCEEEEE
Confidence            66544678999996 4999999999986

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.7e-27  Score=189.46  Aligned_cols=143  Identities=24%  Similarity=0.254  Sum_probs=122.3

Q ss_pred             cceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC--CCCCCCcccccceEEEEEEecCCC
Q 023007           47 PSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP--VRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        47 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      .|++++++++++    ++++++|.|+++++||+|||.+++||++|++.+.+...  ...+.|.++|||++|+|+++|+++
T Consensus         7 ~~~a~V~~gp~~----l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v   82 (185)
T d1pl8a1           7 NNLSLVVHGPGD----LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSV   82 (185)
T ss_dssp             CCEEEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTC
T ss_pred             CCEEEEEeCCCe----EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccce
Confidence            678999999875    99999999999999999999999999999999875421  123568999999999999999999


Q ss_pred             CCCCCCCEEEecCC---------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHH
Q 023007          125 TRLAPGDWVIPSPP---------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTAL  177 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~---------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~  177 (288)
                      ++|++||+|+..+.                           .+|+|+||++++.++++++|+++++++++.++  +.+|+
T Consensus        83 ~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p--l~~a~  160 (185)
T d1pl8a1          83 KHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP--LEKAL  160 (185)
T ss_dssp             CSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE--GGGHH
T ss_pred             eeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHH--HHHHH
Confidence            99999999986531                           25789999999999999999999999987765  55677


Q ss_pred             HHHHhhcCCCCCCeEEEeCC
Q 023007          178 RMLEDFTTLNSGDSIVQNGA  197 (288)
Q Consensus       178 ~~l~~~~~~~~g~~vlI~g~  197 (288)
                      +++.. .++++|++|+| |+
T Consensus       161 ~a~~~-~~~~~G~~VlI-g~  178 (185)
T d1pl8a1         161 EAFET-FKKGLGLKIML-KC  178 (185)
T ss_dssp             HHHHH-HHTTCCSEEEE-EC
T ss_pred             HHHHH-hCCCCCCEEEE-Ee
Confidence            77654 67899999998 44

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=3.6e-26  Score=185.27  Aligned_cols=144  Identities=26%  Similarity=0.330  Sum_probs=124.7

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      .+|+++++.+.+.+   ++++++|.|+++++||+||+.++++|++|++.+.|.++.  ++|.++|||++|+|+++|++++
T Consensus         2 k~~~Aav~~~~g~~---l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~--~~P~i~GHE~~G~V~~vG~~v~   76 (194)
T d1f8fa1           2 KDIIAAVTPCKGAD---FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV--PLPAVLGHEGSGIIEAIGPNVT   76 (194)
T ss_dssp             EEEEEEEBCSTTCC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCEEEEEEEEECTTCC
T ss_pred             ceeEEEEEcCCCCC---cEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc--cCCcccccceEEEeeecCccce
Confidence            36799999998876   899999999999999999999999999999999987764  6799999999999999999999


Q ss_pred             CCCCCCEEEecCCC------------------------------------------------CcccceEEEeeCCcEEEc
Q 023007          126 RLAPGDWVIPSPPS------------------------------------------------SGTWQSYVVKDQSVWHKV  157 (288)
Q Consensus       126 ~~~~Gd~V~~~~~~------------------------------------------------~G~~a~~~~~~~~~l~~i  157 (288)
                      +|++||+|+..+..                                                .|+|+||.+++...++++
T Consensus        77 ~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~i  156 (194)
T d1f8fa1          77 ELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  156 (194)
T ss_dssp             SCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             eEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEEC
Confidence            99999999763210                                                268899999999999999


Q ss_pred             CCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       158 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      |++++++++                         +++.|+ |++|++++|+++.+|++.++.+
T Consensus       157 p~~i~~~~~-------------------------~~i~g~-g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         157 TKDFPFDQL-------------------------VKFYAF-DEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             CTTCCGGGG-------------------------EEEEEG-GGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCCcccE-------------------------EEEeCc-HHHHHHHHHHHHHcCCCEEEEe
Confidence            998876543                         444555 9999999999999999877664

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=3.5e-26  Score=183.46  Aligned_cols=142  Identities=24%  Similarity=0.301  Sum_probs=122.4

Q ss_pred             CCccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           44 MSPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        44 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      |+.+|||+++++++.+   +++++++.|+++++||+|||.++|||++|++.+.|..+.. ++|.++|||++|+|+++|++
T Consensus         1 m~~k~kA~v~~~~~~p---l~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~-~~P~vlGHE~~G~V~~vG~~   76 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQP---LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV-PLPIILGHEGAGRVVEVNGE   76 (184)
T ss_dssp             CCEEEEEEEBCSTTSC---CEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTC-CSSBCCCCEEEEEEEEESSC
T ss_pred             CCceEEEEEEecCCCC---cEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCcc-ccccccceeeeeeeeEEecc
Confidence            5678899999999876   8899999999999999999999999999999999876643 68999999999999999999


Q ss_pred             CC-----CCCCCCEEEecCC-----------------------------------CCcccceEEEee-CCcEEEcCCCCC
Q 023007          124 VT-----RLAPGDWVIPSPP-----------------------------------SSGTWQSYVVKD-QSVWHKVSKDSP  162 (288)
Q Consensus       124 ~~-----~~~~Gd~V~~~~~-----------------------------------~~G~~a~~~~~~-~~~l~~ip~~~~  162 (288)
                      +.     ++++||+|+..+.                                   .+|+|+||+.++ ..+++++|++++
T Consensus        77 v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~  156 (184)
T d1vj0a1          77 KRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKIT  156 (184)
T ss_dssp             CBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCC
T ss_pred             ccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCC
Confidence            86     4689999986431                                   168999999996 579999999999


Q ss_pred             hhhhcccccchHHHHHHHHhhcCCCCCCeEEEeC
Q 023007          163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNG  196 (288)
Q Consensus       163 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g  196 (288)
                      +++      ++.+|++++.. +.+++|++|+|+.
T Consensus       157 ~~~------pl~~A~~a~~~-~~~~~G~~VlI~~  183 (184)
T d1vj0a1         157 HRL------PLKEANKALEL-MESREALKVILYP  183 (184)
T ss_dssp             EEE------EGGGHHHHHHH-HHHTSCSCEEEEC
T ss_pred             HHH------HHHHHHHHHHH-hCCCcCCEEEEee
Confidence            653      36678888854 8899999999984

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=4.3e-28  Score=191.48  Aligned_cols=152  Identities=18%  Similarity=0.160  Sum_probs=134.1

Q ss_pred             ccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCC
Q 023007           46 PPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVT  125 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~  125 (288)
                      .+||++++++.++... +++++++.|++++|||+|||.|++||++|++.+.|.++..+..|.++|+|++|+|++  +.++
T Consensus         2 ~~~ka~~~~~~g~~~~-l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~   78 (162)
T d1tt7a1           2 TLFQALQAEKNADDVS-VHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDP   78 (162)
T ss_dssp             CEEEEEEECCGGGSCC-CEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSST
T ss_pred             CcEEEEEEEecCCCeE-EEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--cccc
Confidence            4789999999888654 999999999999999999999999999999999998877667789999999999998  6678


Q ss_pred             CCCCCCEEEecCCC-----CcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCCh
Q 023007          126 RLAPGDWVIPSPPS-----SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSI  200 (288)
Q Consensus       126 ~~~~Gd~V~~~~~~-----~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~  200 (288)
                      ++++||+|+.....     .|+|+||+++|++.++++|+++++++||.++..++|||.++.. .+...+++|||.|++|+
T Consensus        79 ~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1          79 RFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQNRIQGR  157 (162)
T ss_dssp             TCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THHHHHHHTTTTCCSSE
T ss_pred             ccccceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCcce
Confidence            89999999887542     6899999999999999999999999999999999999977654 34555688999988776


Q ss_pred             H
Q 023007          201 V  201 (288)
Q Consensus       201 v  201 (288)
                      +
T Consensus       158 v  158 (162)
T d1tt7a1         158 V  158 (162)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=1.4e-25  Score=179.60  Aligned_cols=142  Identities=25%  Similarity=0.331  Sum_probs=117.5

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCC-------CCCCCCcccccceEEEEEEe
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYP-------VRPKVPAVGGYEGVGEVYSV  120 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~-------~~~~~p~~~G~e~~G~V~~~  120 (288)
                      |||++++++|++   +++++++.|+++++||+||+.+++||++|++++.|.++       ...++|.++|||++|+|+++
T Consensus         1 MKA~~~~~~G~p---l~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~   77 (177)
T d1jvba1           1 MRAVRLVEIGKP---LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (177)
T ss_dssp             CEEEEECSTTSC---CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEEeCCCC---CEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeee
Confidence            899999999876   88999999999999999999999999999999988643       22367999999999999999


Q ss_pred             cCCCCCCCCCCEEEecCCC--------------------------CcccceEEEeeCC-cEEEcCCCCChhhhcccccch
Q 023007          121 GSAVTRLAPGDWVIPSPPS--------------------------SGTWQSYVVKDQS-VWHKVSKDSPMEYAATIIVNP  173 (288)
Q Consensus       121 G~~~~~~~~Gd~V~~~~~~--------------------------~G~~a~~~~~~~~-~l~~ip~~~~~~~aa~l~~~~  173 (288)
                      |+++++|++||+|+..+..                          +|+|+||++++.. .++++|+..+.+.++....++
T Consensus        78 g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~  157 (177)
T d1jvba1          78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEA  157 (177)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGH
T ss_pred             ccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHH
Confidence            9999999999999876421                          4899999999765 466766665555554445577


Q ss_pred             HHHHHHHHhhcCCCCCCeEEE
Q 023007          174 LTALRMLEDFTTLNSGDSIVQ  194 (288)
Q Consensus       174 ~ta~~~l~~~~~~~~g~~vlI  194 (288)
                      .++++++.. .++ .|++|||
T Consensus       158 ~~a~~~~~~-~~~-~G~~VlI  176 (177)
T d1jvba1         158 NEAIDNLEN-FKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHHHHT-TCC-CSEEEEE
T ss_pred             HHHHHHHHh-hcc-cCCceEC
Confidence            889998865 555 5899987

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.6e-25  Score=173.18  Aligned_cols=130  Identities=15%  Similarity=0.127  Sum_probs=114.8

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      |||+++++++++. .+++++++.|+++++||+|||.|++||+.|.....|.++.....|.++|+|++|+|+++|.  ..+
T Consensus         1 MkA~v~~~~~~~~-~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~   77 (146)
T d1o89a1           1 LQALLLEQQDGKT-LASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRF   77 (146)
T ss_dssp             CEEEEEECC---C-EEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTC
T ss_pred             CeEEEEEcCCCce-EEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCc
Confidence            8999999988864 4889999999999999999999999999999999998887778899999999999999765  479


Q ss_pred             CCCCEEEecCCC-----CcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHH
Q 023007          128 APGDWVIPSPPS-----SGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRML  180 (288)
Q Consensus       128 ~~Gd~V~~~~~~-----~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l  180 (288)
                      ++||+|+.....     +|+|+||+++|+++++++|+++|+++||++++++.||+..+
T Consensus        78 ~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          78 HAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             CTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             cceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999876532     69999999999999999999999999999998888886554

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.93  E-value=3.7e-28  Score=194.43  Aligned_cols=160  Identities=36%  Similarity=0.576  Sum_probs=134.9

Q ss_pred             ccceEEEEccCCCCCcceE--EEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCC---------CCCcccccceE
Q 023007           46 PPSKAVVYEREGPPDSVIK--MIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---------KVPAVGGYEGV  114 (288)
Q Consensus        46 ~~~~a~~~~~~g~~~~~~~--~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~---------~~p~~~G~e~~  114 (288)
                      .+||++++++.|+|.+.++  ..+.|.|+++++||+|||.++++|++|++++.|.++...         ..|.++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            4789999999998765444  556778889999999999999999999999988654322         35678899999


Q ss_pred             EEEEEecCCCCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCChhhhcccccchHHHHHHHHh-hcCCCCCCeEE
Q 023007          115 GEVYSVGSAVTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVNPLTALRMLED-FTTLNSGDSIV  193 (288)
Q Consensus       115 G~V~~~G~~~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~~g~~vl  193 (288)
                      |+|++.|.++..++.||+|.......|+|+||+.+++++++++|++++...+  +...++|||+++.. ...+++|++|+
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vl  159 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLHELY  159 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHHHHH
T ss_pred             cccccccccccccccccceeccccccccccceeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCCEEE
Confidence            9999999999999999999988777899999999999999999998764444  44568899988764 46799999999


Q ss_pred             EeC-CCChHHHHHHH
Q 023007          194 QNG-ATSIVGQCIIQ  207 (288)
Q Consensus       194 I~g-~~g~vG~~a~~  207 (288)
                      |.| ++|++|++++|
T Consensus       160 i~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         160 QDGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHHTGGGSCEEEE
T ss_pred             EECccchhhhheEEe
Confidence            998 45789998776

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=6.5e-27  Score=186.82  Aligned_cols=140  Identities=21%  Similarity=0.199  Sum_probs=112.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      ||++++.++++    ++++|.|.|.++++||+||+.+++||++|++.+.+.... .++|.++|||++|+|+++|+++++|
T Consensus         1 MKa~v~~~~~~----l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~-~~~P~i~GhE~~G~V~~vG~~v~~~   75 (177)
T d1jqba1           1 MKGFAMLGINK----LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALG-DRKNMILGHEAVGEVVEVGSEVKDF   75 (177)
T ss_dssp             CEEEEEEETTE----EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTC-CCSSEECCCCEEEEEEEECTTCCSC
T ss_pred             CeEEEEEeCCC----eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCC-CCCCccCcceeeEEeeeccccccee
Confidence            79999999986    999999999999999999999999999999877644333 2669999999999999999999999


Q ss_pred             CCCCEEEecCC-----------------------------CCcccceEEEeeC--CcEEEcCCCCChhhhcccccchHHH
Q 023007          128 APGDWVIPSPP-----------------------------SSGTWQSYVVKDQ--SVWHKVSKDSPMEYAATIIVNPLTA  176 (288)
Q Consensus       128 ~~Gd~V~~~~~-----------------------------~~G~~a~~~~~~~--~~l~~ip~~~~~~~aa~l~~~~~ta  176 (288)
                      ++||||+..+.                             .+|+|+||+++|.  .+++++|+++++++++........+
T Consensus        76 ~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~~~~~  155 (177)
T d1jqba1          76 KPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYHGFDH  155 (177)
T ss_dssp             CTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEESGGG
T ss_pred             cCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHHHHHH
Confidence            99999985432                             1689999999996  4689999999998876554332222


Q ss_pred             HHHHHhhcCCCCCCeEEEeCCCChHHHH
Q 023007          177 LRMLEDFTTLNSGDSIVQNGATSIVGQC  204 (288)
Q Consensus       177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~  204 (288)
                         +        ++.++++|+ |++|+.
T Consensus       156 ---~--------~~~vlv~g~-gp~gl~  171 (177)
T d1jqba1         156 ---I--------EEALLLMKD-KPKDLI  171 (177)
T ss_dssp             ---H--------HHHHHHHHH-CCTTCS
T ss_pred             ---h--------cCceEEECC-CHHHhh
Confidence               1        234666666 666553

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.92  E-value=4.1e-25  Score=179.94  Aligned_cols=143  Identities=29%  Similarity=0.345  Sum_probs=121.8

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      ..+|||++++.++.+   +++++++.|+++++||+|||.++|||++|++.+.|.++.  .+|.++|||++|+|+++|+++
T Consensus         6 ~~k~KAavl~~~~~~---l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~--~~P~i~GHE~~G~Vv~vG~~v   80 (198)
T d2jhfa1           6 VIKCKAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVESIGEGV   80 (198)
T ss_dssp             CEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEEEECTTC
T ss_pred             ceEEEEEEEecCCCC---CEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc--ccceecccceeEEEEecCccc
Confidence            447899999998876   889999999999999999999999999999999998765  579999999999999999999


Q ss_pred             CCCCCCCEEEecCCC-----------------------------------------------CcccceEEEeeCCcEEEc
Q 023007          125 TRLAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHKV  157 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~~-----------------------------------------------~G~~a~~~~~~~~~l~~i  157 (288)
                      +++++||+|+..+..                                               .|+|+||+++++.+++++
T Consensus        81 ~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~  160 (198)
T d2jhfa1          81 TTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (198)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             cCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEEC
Confidence            999999999875421                                               289999999999999999


Q ss_pred             CCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEe
Q 023007          158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN  195 (288)
Q Consensus       158 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  195 (288)
                      |++++++.++....++.+...+.   ..+++|++|+|.
T Consensus       161 p~~~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi  195 (198)
T d2jhfa1         161 DAAFALDPLITHVLPFEKINEGF---DLLRSGESIRTI  195 (198)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEE
T ss_pred             CCCCCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEE
Confidence            99999887766655554433332   236789999875

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.92  E-value=5.9e-28  Score=196.80  Aligned_cols=155  Identities=22%  Similarity=0.213  Sum_probs=127.4

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCC-------CCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEe
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEV-------KENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSV  120 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~-------~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~  120 (288)
                      +||+++++++.    ++++|++.|++       .++||+|||.+++||++|++.+.|..+.  .+|.++|||++|+|+++
T Consensus         2 ~kA~v~~~~~~----le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~--~~P~v~GHE~~G~Vv~v   75 (201)
T d1kola1           2 NRGVVYLGSGK----VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA--QVGLVLGHEITGEVIEK   75 (201)
T ss_dssp             EEEEEEEETTE----EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC--CTTCBCCCCEEEEEEEE
T ss_pred             cEEEEEeCCCc----eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc--ccceeccceeeeeeecc
Confidence            58999999886    89999998864       4699999999999999999999987764  67999999999999999


Q ss_pred             cCCCCCCCCCCEEEecCC------------------------------------CCcccceEEEeeC--CcEEEcCCCCC
Q 023007          121 GSAVTRLAPGDWVIPSPP------------------------------------SSGTWQSYVVKDQ--SVWHKVSKDSP  162 (288)
Q Consensus       121 G~~~~~~~~Gd~V~~~~~------------------------------------~~G~~a~~~~~~~--~~l~~ip~~~~  162 (288)
                      |+++++|++||||+..+.                                    .+|+|+||+++|.  .+++++|++..
T Consensus        76 G~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~  155 (201)
T d1kola1          76 GRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDK  155 (201)
T ss_dssp             CTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHH
T ss_pred             ccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCC
Confidence            999999999999985431                                    1589999999985  36999999877


Q ss_pred             hhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC
Q 023007          163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI  214 (288)
Q Consensus       163 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~  214 (288)
                      ..+++.+..++.++++++.. ...+.+    ++|+ |++|++++|+||.+|+
T Consensus       156 ~~~~~~~~~~~~~~~~a~~~-~~~~~g----~~g~-G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         156 AMEKINIAEVVGVQVISLDD-APRGYG----EFDA-GVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HHHTCCHHHHHTEEEECGGG-HHHHHH----HHHH-TCSCEEEECTTCSSCC
T ss_pred             hHHHHHHHHHHHHHHHHHHh-CCCCCe----EEee-CHHHHHHHHHHHHcCC
Confidence            66666666666677666543 333333    3577 9999999999999886

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=3.2e-25  Score=180.29  Aligned_cols=143  Identities=25%  Similarity=0.351  Sum_probs=121.2

Q ss_pred             CccceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCC
Q 023007           45 SPPSKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAV  124 (288)
Q Consensus        45 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~  124 (288)
                      ..||||+++++++++   ++++|+|.|+++++||+|||.+++||++|++++.|.++.  .+|.++|||++|+|+++|+++
T Consensus         6 ~~~~KAav~~~~g~~---l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~--~~P~i~GHE~~G~Vv~~G~~v   80 (198)
T d1p0fa1           6 DITCKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS--KFPVILGHEAVGVVESIGAGV   80 (198)
T ss_dssp             CEEEEEEEBSSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCCEEEEEEEECTTC
T ss_pred             ceEEEEEEEccCCCC---CEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc--ccccccceeeeeeeeecCccc
Confidence            348999999999876   899999999999999999999999999999999988765  679999999999999999999


Q ss_pred             CCCCCCCEEEecCCC-----------------------------------------------CcccceEEEeeCCcEEEc
Q 023007          125 TRLAPGDWVIPSPPS-----------------------------------------------SGTWQSYVVKDQSVWHKV  157 (288)
Q Consensus       125 ~~~~~Gd~V~~~~~~-----------------------------------------------~G~~a~~~~~~~~~l~~i  157 (288)
                      .++++||+|+..+..                                               .|+|+||+.++...++++
T Consensus        81 ~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~ki  160 (198)
T d1p0fa1          81 TCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKI  160 (198)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEE
T ss_pred             ccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEEC
Confidence            999999999975421                                               278999999999999999


Q ss_pred             CCCCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHH
Q 023007          158 SKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQ  203 (288)
Q Consensus       158 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~  203 (288)
                      |+++++..++...+...+          +.++++|+|.|+ |++|+
T Consensus       161 p~~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~-G~iGl  195 (198)
T d1p0fa1         161 DPKINVNFLVSTKLTLDQ----------INKAFELLSSGQ-GVRSI  195 (198)
T ss_dssp             CTTSCGGGGEEEEECGGG----------HHHHHHHTTTSS-CSEEE
T ss_pred             CCCCCHHHHHHhhcchhh----------cCCCCEEEEECC-CcceE
Confidence            999998877665544333          233445788887 77764

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5e-25  Score=175.85  Aligned_cols=123  Identities=24%  Similarity=0.320  Sum_probs=114.7

Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      +|+++||+++++++|||+++.+.+++++|++|||+|++|++|++++|+|+.+|++|++++    .++++.++++++|+++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~----~~~~~~~~~~~~Ga~~   76 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA----GTEEGQKIVLQNGAHE   76 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccc----ccccccccccccCccc
Confidence            589999999999999999999889999999999999999999999999999999999999    5788999999999999


Q ss_pred             EEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          241 VFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       241 v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      ++|+++.+ .+.+++.+++.+ +|++|||+|++.++.++++++++|++|
T Consensus        77 vi~~~~~~~~~~i~~~t~~~g-~d~v~d~~g~~~~~~~~~~l~~~G~iv  124 (174)
T d1yb5a2          77 VFNHREVNYIDKIKKYVGEKG-IDIIIEMLANVNLSKDLSLLSHGGRVI  124 (174)
T ss_dssp             EEETTSTTHHHHHHHHHCTTC-EEEEEESCHHHHHHHHHHHEEEEEEEE
T ss_pred             ccccccccHHHHhhhhhccCC-ceEEeecccHHHHHHHHhccCCCCEEE
Confidence            99998754 578899999876 999999999888899999999999985

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=7.2e-25  Score=175.68  Aligned_cols=123  Identities=20%  Similarity=0.230  Sum_probs=115.4

Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      +|+++||+++++++|||+++++.+++++|++|+|+|++|++|++++|+|+..|++|++++    .+++++++++++|+++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~----~s~~k~~~~~~lGa~~   76 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV----GTAQKAQSALKAGAWQ   76 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEE----SSHHHHHHHHHHTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecc----cchHHHHHHHhcCCeE
Confidence            589999999999999999999989999999999999999999999999999999999998    6899999999999999


Q ss_pred             EEeCCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          241 VFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       241 v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      ++|+++.+ .++++++|++.+ +|+++||+|++.+..++++++++|+++
T Consensus        77 vi~~~~~d~~~~v~~~t~g~g-~d~v~d~~g~~~~~~~~~~l~~~G~~v  124 (179)
T d1qora2          77 VINYREEDLVERLKEITGGKK-VRVVYDSVGRDTWERSLDCLQRRGLMV  124 (179)
T ss_dssp             EEETTTSCHHHHHHHHTTTCC-EEEEEECSCGGGHHHHHHTEEEEEEEE
T ss_pred             EEECCCCCHHHHHHHHhCCCC-eEEEEeCccHHHHHHHHHHHhcCCeee
Confidence            99998764 588999999877 999999999998999999999999874

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=2.9e-24  Score=172.71  Aligned_cols=120  Identities=24%  Similarity=0.279  Sum_probs=111.9

Q ss_pred             hhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe
Q 023007          164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (288)
Q Consensus       164 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~  243 (288)
                      +|||+++++++|||+++++.+++++|++|||+|++|++|++++|+|+.+|+++++++    .++++.++++++|++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~----~~~~~~~~l~~~Ga~~vi~   76 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTA----GSDAKREMLSRLGVEYVGD   76 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEE----SSHHHHHHHHTTCCSEEEE
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeee----ccccccccccccccccccc
Confidence            478999999999999999999999999999999999999999999999999999999    5788999999999999999


Q ss_pred             CCccc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          244 ESQLE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       244 ~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +++.+ .+.+++++++.| +|++|||+|++.++.++++|+++|++|
T Consensus        77 ~~~~~~~~~v~~~t~~~g-~d~v~d~~g~~~~~~~~~~l~~~G~~v  121 (183)
T d1pqwa_          77 SRSVDFADEILELTDGYG-VDVVLNSLAGEAIQRGVQILAPGGRFI  121 (183)
T ss_dssp             TTCSTHHHHHHHHTTTCC-EEEEEECCCTHHHHHHHHTEEEEEEEE
T ss_pred             CCccCHHHHHHHHhCCCC-EEEEEecccchHHHHHHHHhcCCCEEE
Confidence            88764 588999999887 999999999988899999999999985

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=1.6e-24  Score=172.49  Aligned_cols=122  Identities=21%  Similarity=0.266  Sum_probs=103.7

Q ss_pred             CChhhhcccccchHHHHHHHH---hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC
Q 023007          161 SPMEYAATIIVNPLTALRMLE---DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG  237 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g  237 (288)
                      +++++||+++++++|||++++   +.++.++|++|||+|++|++|.+++|+|+..|++|++++    +++++.++++++|
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~----~s~~k~~~~~~lG   76 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEAST----GKAAEHDYLRVLG   76 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEE----SCTTCHHHHHHTT
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEec----CchHHHHHHHhcc
Confidence            589999999999999997654   557889999999999999999999999999999999999    6788999999999


Q ss_pred             CCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          238 ADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       238 ~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +++++|+++.+.+.++ .+++.+ +|+|||++|++.++.++++|+++||++
T Consensus        77 a~~vi~~~~~~~~~~~-~~~~~g-vD~vid~vgg~~~~~~l~~l~~~Griv  125 (176)
T d1xa0a2          77 AKEVLAREDVMAERIR-PLDKQR-WAAAVDPVGGRTLATVLSRMRYGGAVA  125 (176)
T ss_dssp             CSEEEECC----------CCSCC-EEEEEECSTTTTHHHHHHTEEEEEEEE
T ss_pred             cceeeecchhHHHHHH-HhhccC-cCEEEEcCCchhHHHHHHHhCCCceEE
Confidence            9999998776544444 445544 999999999999999999999999985

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=2.8e-23  Score=165.89  Aligned_cols=131  Identities=21%  Similarity=0.226  Sum_probs=109.7

Q ss_pred             ceEEEEccCCCCCcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCCCCCC
Q 023007           48 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSAVTRL  127 (288)
Q Consensus        48 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~~~~~  127 (288)
                      |||+....++++   ++++|++.|+|+++||+||+.+++||++|++.+.|.... ..+|.++|||++|+|+++|++++++
T Consensus         1 m~a~~~~~~~~p---l~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~-~~~P~i~GhE~~G~V~~vG~~V~~~   76 (179)
T d1uufa1           1 IKAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVVAVGDQVEKY   76 (179)
T ss_dssp             CEEEEBSSTTSC---CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CeEEEEccCCCC---CEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeecc-ccccccccccccccchhhccccccC
Confidence            789999999887   899999999999999999999999999999999987654 3779999999999999999999999


Q ss_pred             CCCCEEEecCC-----------------------------------CCcccceEEEeeCCcEEEcCCCCChhhhcccccc
Q 023007          128 APGDWVIPSPP-----------------------------------SSGTWQSYVVKDQSVWHKVSKDSPMEYAATIIVN  172 (288)
Q Consensus       128 ~~Gd~V~~~~~-----------------------------------~~G~~a~~~~~~~~~l~~ip~~~~~~~aa~l~~~  172 (288)
                      ++||+|...+.                                   ..|+|+||+.+++++++++|+.....  + +..+
T Consensus        77 ~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~--~-~a~~  153 (179)
T d1uufa1          77 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEM--I-RADQ  153 (179)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEE--E-CGGG
T ss_pred             CCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcCh--h-Hhch
Confidence            99999964320                                   14899999999999999999654322  2 2225


Q ss_pred             hHHHHHHHHhhcCC
Q 023007          173 PLTALRMLEDFTTL  186 (288)
Q Consensus       173 ~~ta~~~l~~~~~~  186 (288)
                      +.++++++.+ +.+
T Consensus       154 l~~a~~a~~~-a~v  166 (179)
T d1uufa1         154 INEAYERMLR-GDV  166 (179)
T ss_dssp             HHHHHHHHHT-TCS
T ss_pred             hHHHHHHHHH-hCc
Confidence            6788888865 444

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=5.2e-23  Score=163.50  Aligned_cols=117  Identities=22%  Similarity=0.201  Sum_probs=104.5

Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      +++++||+++++++|||+++.+ +++++|++|||+|++|++|++++|+|+.+|++|++++    .++++.+.++++|+++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~----~~~~~~~~~~~lGa~~   75 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAA----SRPEKLALPLALGAEE   75 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEE----SSGGGSHHHHHTTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhccccccccccc----ccccccccccccccce
Confidence            5789999999999999999976 8999999999999999999999999999999999998    5788999999999999


Q ss_pred             EEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       241 v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      ++|+.+    ...+.+++.| +|+||||+| +.++.++++++++|+++
T Consensus        76 ~i~~~~----~~~~~~~~~g-~D~v~d~~G-~~~~~~~~~l~~~G~~v  117 (171)
T d1iz0a2          76 AATYAE----VPERAKAWGG-LDLVLEVRG-KEVEESLGLLAHGGRLV  117 (171)
T ss_dssp             EEEGGG----HHHHHHHTTS-EEEEEECSC-TTHHHHHTTEEEEEEEE
T ss_pred             eeehhh----hhhhhhcccc-ccccccccc-hhHHHHHHHHhcCCcEE
Confidence            998864    3345556665 999999988 56789999999999985

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.88  E-value=1.6e-22  Score=162.36  Aligned_cols=117  Identities=25%  Similarity=0.277  Sum_probs=107.1

Q ss_pred             cccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCc
Q 023007          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQ  246 (288)
Q Consensus       167 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~  246 (288)
                      +++.++++|||+++++.+++++|++|||+|++|++|++++|+++..|++||+++    .++++.++++++|+++++++++
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~----~~~~~~~~~~~~Ga~~vi~~~~   83 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAA----GSDEKIAYLKQIGFDAAFNYKT   83 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHTTCSEEEETTS
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeC----CCHHHHHHHHhhhhhhhccccc
Confidence            467788999999999999999999999999999999999999999999999999    6889999999999999999876


Q ss_pred             cc-HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          247 LE-VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       247 ~~-~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      .. .+.+.+.+++.| +|+||||+|++.++.++++++++|+++
T Consensus        84 ~~~~~~~~~~~~~~G-vd~v~D~vG~~~~~~~~~~l~~~G~~v  125 (182)
T d1v3va2          84 VNSLEEALKKASPDG-YDCYFDNVGGEFLNTVLSQMKDFGKIA  125 (182)
T ss_dssp             CSCHHHHHHHHCTTC-EEEEEESSCHHHHHHHGGGEEEEEEEE
T ss_pred             ccHHHHHHHHhhcCC-CceeEEecCchhhhhhhhhccCCCeEE
Confidence            54 567777877776 999999999988899999999999874

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.88  E-value=1.4e-22  Score=163.58  Aligned_cols=127  Identities=37%  Similarity=0.487  Sum_probs=110.1

Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEe-CCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQN-GATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD  239 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~-g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~  239 (288)
                      +++++||+++++++|||+++.+.+++++|++|+|+ |++|++|++++|+||.+|++||++++.....+++.+.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            58999999999999999999999999999999886 77899999999999999999999997766667788899999999


Q ss_pred             EEEeCCcc----cHHHHHHHhc--CCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          240 EVFTESQL----EVKNVKGLLA--NLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       240 ~v~~~~~~----~~~~i~~~~~--~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +++++++.    ..+.+.+.++  +. ++|++|||+|++.+..++++|+++|++|
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~-~vdvv~D~vg~~~~~~~~~~l~~~G~~v  134 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGG-EAKLALNCVGGKSSTGIARKLNNNGLML  134 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTC-CEEEEEESSCHHHHHHHHHTSCTTCEEE
T ss_pred             EEEeccccchhHHHHHHHHHHhhccC-CceEEEECCCcchhhhhhhhhcCCcEEE
Confidence            99988643    2344555442  33 4999999999999999999999999985

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.87  E-value=2.2e-22  Score=160.20  Aligned_cols=121  Identities=22%  Similarity=0.153  Sum_probs=108.7

Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCC
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGAD  239 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~  239 (288)
                      +++++|+.++.++.|+|+++.. +++++|++|+|+|+ |++|++++|+++.+|++ |+++.    .+++|++.++++|++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~-a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d----~~~~r~~~a~~lGa~   74 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAEL-ADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVG----SRPICVEAAKFYGAT   74 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHH-TTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEEC----CCHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHH-hCCCCCCEEEEEcC-Ccchhhhhhhhhccccccccccc----chhhhHHHHHhhCcc
Confidence            5789999999999999999865 99999999999998 99999999999999984 66565    689999999999999


Q ss_pred             EEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          240 EVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       240 ~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +++|+++.. .+.+.+++++.| +|++|||+|++.. +.++++++++|+++
T Consensus        75 ~~i~~~~~~~~~~v~~~t~g~G-~D~vid~~g~~~~~~~a~~~~~~~G~iv  124 (174)
T d1jqba2          75 DILNYKNGHIEDQVMKLTNGKG-VDRVIMAGGGSETLSQAVKMVKPGGIIS  124 (174)
T ss_dssp             EEECGGGSCHHHHHHHHTTTSC-EEEEEECSSCTTHHHHHHHHEEEEEEEE
T ss_pred             ccccccchhHHHHHHHHhhccC-cceEEEccCCHHHHHHHHHHHhcCCEEE
Confidence            999997754 578999999887 9999999998775 99999999999975

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.86  E-value=1.2e-21  Score=157.21  Aligned_cols=121  Identities=21%  Similarity=0.250  Sum_probs=107.8

Q ss_pred             ChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       162 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      |+..+|.+.+++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++.    .++++++.++++|+++
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~----~~~~~~~~a~~lGa~~   76 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIA----GSPNRLKLAEEIGADL   76 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEE----SCHHHHHHHHHTTCSE
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccc----cccccccccccccceE
Confidence            456788899999999999999899999999999998 9999999999999998 677777    6899999999999999


Q ss_pred             EEeCCcccH----HHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          241 VFTESQLEV----KNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       241 v~~~~~~~~----~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      ++|+++...    +.+.+++++.| +|+||||+|++.. +.++++++++|+++
T Consensus        77 vi~~~~~~~~~~~~~i~~~~~~~g-~Dvvid~vG~~~~~~~a~~~l~~~G~iv  128 (182)
T d1vj0a2          77 TLNRRETSVEERRKAIMDITHGRG-ADFILEATGDSRALLEGSELLRRGGFYS  128 (182)
T ss_dssp             EEETTTSCHHHHHHHHHHHTTTSC-EEEEEECSSCTTHHHHHHHHEEEEEEEE
T ss_pred             EEeccccchHHHHHHHHHhhCCCC-ceEEeecCCchhHHHHHHHHhcCCCEEE
Confidence            999987543    45788888877 9999999998765 99999999999974

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=8.7e-22  Score=158.63  Aligned_cols=123  Identities=20%  Similarity=0.193  Sum_probs=102.0

Q ss_pred             CCChhhhcccccchHHHHHHHHhhcCCCCC--CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhC
Q 023007          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSG--DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGL  236 (288)
Q Consensus       160 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g--~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~  236 (288)
                      ++++.+.+ ++++++|||+++++.+++++|  ++|||+|++|++|++++|+|+.+|+++++++.   .++++. +..+++
T Consensus         1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~---~~~e~~~~l~~~~   76 (187)
T d1vj1a2           1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGIC---GTQEKCLFLTSEL   76 (187)
T ss_dssp             CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEE---SSHHHHHHHHHHS
T ss_pred             CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceeccc---chHHHHhhhhhcc
Confidence            35566643 677899999999999999988  89999999999999999999999997665543   355554 455689


Q ss_pred             CCCEEEeCCcccH-HHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          237 GADEVFTESQLEV-KNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       237 g~~~v~~~~~~~~-~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      |+++++|+++.+. +.+++.++ .| +|+||||+|++.++.++++++++|+++
T Consensus        77 gad~vi~~~~~~~~~~~~~~~~-~G-vDvv~D~vGg~~~~~~~~~l~~~G~iv  127 (187)
T d1vj1a2          77 GFDAAVNYKTGNVAEQLREACP-GG-VDVYFDNVGGDISNTVISQMNENSHII  127 (187)
T ss_dssp             CCSEEEETTSSCHHHHHHHHCT-TC-EEEEEESSCHHHHHHHHTTEEEEEEEE
T ss_pred             cceEEeeccchhHHHHHHHHhc-cC-ceEEEecCCchhHHHHhhhccccccEE
Confidence            9999999988764 56666665 45 999999999998999999999999985

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.85  E-value=3.2e-21  Score=153.46  Aligned_cols=121  Identities=18%  Similarity=0.176  Sum_probs=109.3

Q ss_pred             ChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE
Q 023007          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (288)
Q Consensus       162 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v  241 (288)
                      +++.++.+++++.|||+++.+.+++++|++|+|+|+ |++|++++|+++.+|++++++++   .+++++++++++|++++
T Consensus         2 P~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~---~~~~k~~~a~~~Ga~~~   77 (174)
T d1f8fa2           2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVD---IVESRLELAKQLGATHV   77 (174)
T ss_dssp             CGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEE---SCHHHHHHHHHHTCSEE
T ss_pred             CHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeec---cHHHHHHHHHHcCCeEE
Confidence            567899999999999999999899999999999998 99999999999999998877765   58999999999999999


Q ss_pred             EeCCccc-HHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          242 FTESQLE-VKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       242 ~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +|+++.+ .+.+++++++  ++|+||||+|++.. +.++++++++|+++
T Consensus        78 i~~~~~~~~~~i~~~t~g--g~D~vid~~G~~~~~~~~~~~~~~~G~i~  124 (174)
T d1f8fa2          78 INSKTQDPVAAIKEITDG--GVNFALESTGSPEILKQGVDALGILGKIA  124 (174)
T ss_dssp             EETTTSCHHHHHHHHTTS--CEEEEEECSCCHHHHHHHHHTEEEEEEEE
T ss_pred             EeCCCcCHHHHHHHHcCC--CCcEEEEcCCcHHHHHHHHhcccCceEEE
Confidence            9987754 5788999888  59999999998765 99999999999874

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.85  E-value=6.1e-21  Score=151.64  Aligned_cols=122  Identities=18%  Similarity=0.164  Sum_probs=106.3

Q ss_pred             ChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE
Q 023007          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (288)
Q Consensus       162 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v  241 (288)
                      ++++||.+.+++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|++.+++++   .+++|++.++++|++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d---~~~~r~~~a~~~Ga~~~   77 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAID---INGEKFPKAKALGATDC   77 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC---SCGGGHHHHHHTTCSEE
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeec---cchHHHHHHHHhCCCcc
Confidence            578999999999999999988899999999999998 99999999999999997666665   58899999999999999


Q ss_pred             EeCCcc--cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCC-CeeC
Q 023007          242 FTESQL--EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFR-EEQW  288 (288)
Q Consensus       242 ~~~~~~--~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~-G~~v  288 (288)
                      +++...  ..+.+...+.+.| +|++|||+|.+.. +.++++++++ |+++
T Consensus        78 i~~~~~~~~~~~~~~~~~~~G-~d~vie~~G~~~~~~~a~~~~~~g~G~~v  127 (174)
T d1e3ia2          78 LNPRELDKPVQDVITELTAGG-VDYSLDCAGTAQTLKAAVDCTVLGWGSCT  127 (174)
T ss_dssp             ECGGGCSSCHHHHHHHHHTSC-BSEEEESSCCHHHHHHHHHTBCTTTCEEE
T ss_pred             cCCccchhhhhhhHhhhhcCC-CcEEEEecccchHHHHHHHHhhcCCeEEE
Confidence            987543  4556666666655 9999999999876 9999999996 9875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.84  E-value=1e-20  Score=150.26  Aligned_cols=122  Identities=19%  Similarity=0.181  Sum_probs=109.1

Q ss_pred             ChhhhcccccchHHHHHHHHhhc-CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          162 PMEYAATIIVNPLTALRMLEDFT-TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       162 ~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      .+.++|.++++++|||+++.+.. .+++|++|+|+|+ |++|++++|+++.+|++++++++   .+++|+++++++|+++
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~---~~~~k~~~~~~~ga~~   80 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALD---VKEEKLKLAERLGADH   80 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEE---SSHHHHHHHHHTTCSE
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCccccccc---chhHHHHHHhhcccce
Confidence            35788999999999999998866 4899999999998 99999999999999986666554   5789999999999999


Q ss_pred             EEeCCcccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          241 VFTESQLEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       241 v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      ++++.+++.+.+.+.+++.| +|++|||+|+... +.++++++++|++|
T Consensus        81 ~i~~~~~~~~~~~~~~~~~g-~d~vid~~g~~~~~~~a~~~l~~~G~iv  128 (172)
T d1h2ba2          81 VVDARRDPVKQVMELTRGRG-VNVAMDFVGSQATVDYTPYLLGRMGRLI  128 (172)
T ss_dssp             EEETTSCHHHHHHHHTTTCC-EEEEEESSCCHHHHHHGGGGEEEEEEEE
T ss_pred             eecCcccHHHHHHHhhCCCC-ceEEEEecCcchHHHHHHHHHhCCCEEE
Confidence            99999888888888888877 9999999999764 99999999999985

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.83  E-value=1.7e-20  Score=149.32  Aligned_cols=121  Identities=16%  Similarity=0.155  Sum_probs=103.0

Q ss_pred             ChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE
Q 023007          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (288)
Q Consensus       162 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v  241 (288)
                      ++++||.+++++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|++++++++   .+++++++++++|++++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~---~~~~k~~~ak~lGa~~~   77 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVD---INKDKFARAKEFGATEC   77 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC---SCGGGHHHHHHHTCSEE
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEc---ccHHHHHHHHHhCCcEE
Confidence            578899999999999999998899999999999998 89999999999999986666654   58899999999999999


Q ss_pred             EeCCc--ccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCee
Q 023007          242 FTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQ  287 (288)
Q Consensus       242 ~~~~~--~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~  287 (288)
                      +|+.+  .+.....+.+.+.| +|++|||+|++.+ ..++.+++++|++
T Consensus        78 i~~~~~~~~~~~~~~~~~~~g-~D~vid~~G~~~~~~~~~~~~~~g~~~  125 (176)
T d2fzwa2          78 INPQDFSKPIQEVLIEMTDGG-VDYSFECIGNVKVMRAALEACHKGWGV  125 (176)
T ss_dssp             ECGGGCSSCHHHHHHHHTTSC-BSEEEECSCCHHHHHHHHHTBCTTTCE
T ss_pred             EeCCchhhHHHHHHHHHcCCC-CcEeeecCCCHHHHHHHHHhhcCCcee
Confidence            99865  34555544444445 9999999999777 8889999988764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.83  E-value=1.1e-20  Score=149.62  Aligned_cols=122  Identities=20%  Similarity=0.174  Sum_probs=108.7

Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD  239 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~  239 (288)
                      +|+.+||.+++++.|||+++++ .++++|++|+|+|++|++|++++++++.+|+ +|+++.    .+++++++++++|++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~-~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~----~~~~~~~~~~~~Ga~   75 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD----VREEAVEAAKRAGAD   75 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEE----SSHHHHHHHHHHTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccceeeeeecccccccccccccc----cchhhHHHHHHcCCc
Confidence            5789999999999999999965 8999999999999889999999999999997 565665    589999999999999


Q ss_pred             EEEeCCccc-HHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          240 EVFTESQLE-VKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       240 ~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +++++++.+ .+.+++.+++.+ +|++|||+|++.. +.++++++++|+++
T Consensus        76 ~~i~~~~~~~~~~~~~~~~~~~-~d~vid~~g~~~~~~~a~~~l~~~G~iv  125 (170)
T d1jvba2          76 YVINASMQDPLAEIRRITESKG-VDAVIDLNNSEKTLSVYPKALAKQGKYV  125 (170)
T ss_dssp             EEEETTTSCHHHHHHHHTTTSC-EEEEEESCCCHHHHTTGGGGEEEEEEEE
T ss_pred             eeeccCCcCHHHHHHHHhhccc-chhhhcccccchHHHhhhhhcccCCEEE
Confidence            999987654 577888888765 9999999999776 99999999999985

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.82  E-value=6.2e-20  Score=144.78  Aligned_cols=119  Identities=20%  Similarity=0.192  Sum_probs=103.2

Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      +|+++||.++++++|||+++++ +++++|++|+|+|+ |++|++++|+++.+|++|+++.    .++++++.++++|+++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~-~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~----~~~~~~~~a~~~Ga~~   74 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQ-TNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAID----IDDAKLELARKLGASL   74 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceec----chhhHHHhhhccCccc
Confidence            4789999999999999999976 89999999999998 9999999999999999999998    6899999999999999


Q ss_pred             EEeCCccc-HHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          241 VFTESQLE-VKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       241 v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      ++|+.+.+ .+.+.+.+.+   .|.+++|+++.. ++.++++++++|+++
T Consensus        75 ~i~~~~~~~~~~~~~~~~g---~~~~i~~~~~~~~~~~~~~~l~~~G~iv  121 (166)
T d1llua2          75 TVNARQEDPVEAIQRDIGG---AHGVLVTAVSNSAFGQAIGMARRGGTIA  121 (166)
T ss_dssp             EEETTTSCHHHHHHHHHSS---EEEEEECCSCHHHHHHHHTTEEEEEEEE
T ss_pred             cccccchhHHHHHHHhhcC---CcccccccccchHHHHHHHHhcCCcEEE
Confidence            99987764 4666666654   666666666555 499999999999985

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.82  E-value=7.9e-20  Score=145.24  Aligned_cols=121  Identities=16%  Similarity=0.071  Sum_probs=101.8

Q ss_pred             hhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE
Q 023007          163 MEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (288)
Q Consensus       163 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~  242 (288)
                      +.+||.+.+++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|++.+++++   .+++|+++++++|+++++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d---~~~~kl~~a~~lGa~~~i   77 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVG---THKDKFPKAIELGATECL   77 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC---SCGGGHHHHHHTTCSEEE
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccC---ChHHHHHHHHHcCCcEEE
Confidence            35689999999999999988899999999999998 99999999999999986555554   589999999999999999


Q ss_pred             eCCccc--HHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccC-CCeeC
Q 023007          243 TESQLE--VKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRF-REEQW  288 (288)
Q Consensus       243 ~~~~~~--~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~-~G~~v  288 (288)
                      |+++.+  .+.+...+.+.| +|++|||+|+... +.++..+++ +|+++
T Consensus        78 ~~~~~d~~~~~~~~~~~~~G-~d~vid~~g~~~~~~~~~~~~~~~~G~~v  126 (174)
T d1p0fa2          78 NPKDYDKPIYEVICEKTNGG-VDYAVECAGRIETMMNALQSTYCGSGVTV  126 (174)
T ss_dssp             CGGGCSSCHHHHHHHHTTSC-BSEEEECSCCHHHHHHHHHTBCTTTCEEE
T ss_pred             cCCCchhHHHHHHHHhcCCC-CcEEEEcCCCchHHHHHHHHHHHhcCceE
Confidence            986543  555555555545 9999999999876 788887766 58764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.82  E-value=9.4e-20  Score=145.01  Aligned_cols=121  Identities=18%  Similarity=0.153  Sum_probs=104.9

Q ss_pred             ChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       162 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      ++++|+.+++++.|+|+++.+.+++++|++|+|+|+ |++|++++|+++.+|+. |+++.    .+++|++.++++|+++
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd----~~~~kl~~Ak~~GA~~   77 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGID----LNKDKFEKAMAVGATE   77 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCGGGHHHHHHHTCSE
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEec----CcHHHHHHHHhcCCcE
Confidence            588999999999999999988899999999999998 99999999999999975 55555    5899999999999999


Q ss_pred             EEeCCccc--HHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCC-CeeC
Q 023007          241 VFTESQLE--VKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFR-EEQW  288 (288)
Q Consensus       241 v~~~~~~~--~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~-G~~v  288 (288)
                      ++|+.+.+  .+.+.+.+++.| +|++|||+|.... ..++..+.++ |++|
T Consensus        78 ~in~~~~~~~~~~~~~~~~g~G-~d~vi~~~g~~~~~~~a~~~~~~~~G~~v  128 (176)
T d1d1ta2          78 CISPKDSTKPISEVLSEMTGNN-VGYTFEVIGHLETMIDALASCHMNYGTSV  128 (176)
T ss_dssp             EECGGGCSSCHHHHHHHHHTSC-CCEEEECSCCHHHHHHHHTTSCTTTCEEE
T ss_pred             EECccccchHHHHHHHHhcccc-ceEEEEeCCchHHHHHHHHHhhcCCeEEE
Confidence            99987643  566777777776 9999999999876 7777777555 8874

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=5.2e-21  Score=152.20  Aligned_cols=120  Identities=23%  Similarity=0.245  Sum_probs=102.2

Q ss_pred             CChhhhcccccchHHHHHHHH---hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC
Q 023007          161 SPMEYAATIIVNPLTALRMLE---DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG  237 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g  237 (288)
                      +|+.+|+.++++++|||++++   +....+++++|||+|++|++|.+++|+||.+|++||+++    +++++.++++++|
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~----~~~~k~~~~~~lG   76 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVS----GRESTHEYLKSLG   76 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEE----SCGGGHHHHHHHT
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEe----cchhHHHHHHhhc
Confidence            588999999999999998764   334455667999999999999999999999999999999    6889999999999


Q ss_pred             CCEEEeCCcccHHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          238 ADEVFTESQLEVKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       238 ~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +++++|+++.+.  .+.+.+.  ..|.++|++|++.+..++++++++|++|
T Consensus        77 ad~vi~~~~~~~--~~~l~~~--~~~~vvD~Vgg~~~~~~l~~l~~~Griv  123 (177)
T d1o89a2          77 ASRVLPRDEFAE--SRPLEKQ--VWAGAIDTVGDKVLAKVLAQMNYGGCVA  123 (177)
T ss_dssp             EEEEEEGGGSSS--CCSSCCC--CEEEEEESSCHHHHHHHHHTEEEEEEEE
T ss_pred             cccccccccHHH--HHHHHhh--cCCeeEEEcchHHHHHHHHHhccccceE
Confidence            999999876532  1222222  3799999999999999999999999985

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=9.6e-20  Score=143.97  Aligned_cols=118  Identities=19%  Similarity=0.215  Sum_probs=101.1

Q ss_pred             CCChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007          160 DSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD  239 (288)
Q Consensus       160 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~  239 (288)
                      +.++..+|.+.+++.|+|+++++ +++++|++|+|+|+ |++|++++|+++.+|++++++.    .+++++++++++|++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al~~-~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~----~~~~~~~~a~~lGad   76 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFT----TSEAKREAAKALGAD   76 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SSGGGHHHHHHHTCS
T ss_pred             cccHHHHHHHHhHHHHHHHHHHH-hCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhc----cchhHHHHHhccCCc
Confidence            45677888889999999999965 99999999999998 9999999999999999999887    578888999999999


Q ss_pred             EEEeCCcccHHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          240 EVFTESQLEVKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       240 ~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      +++|+.+...  .  ..... ++|++|||+|++. ++.++++++++|+++
T Consensus        77 ~~i~~~~~~~--~--~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv  121 (168)
T d1uufa2          77 EVVNSRNADE--M--AAHLK-SFDFILNTVAAPHNLDDFTTLLKRDGTMT  121 (168)
T ss_dssp             EEEETTCHHH--H--HTTTT-CEEEEEECCSSCCCHHHHHTTEEEEEEEE
T ss_pred             EEEECchhhH--H--HHhcC-CCceeeeeeecchhHHHHHHHHhcCCEEE
Confidence            9999877531  1  12233 3999999999876 599999999999975

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=5.2e-19  Score=140.09  Aligned_cols=120  Identities=18%  Similarity=0.160  Sum_probs=100.3

Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD  239 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~  239 (288)
                      +++++||.+. ++.+||+++.+ +++++|++|+|+|+ |++|++++|+++.+|+ +|+++.    .++++++.++++|++
T Consensus         1 vS~e~Aal~e-pla~a~~a~~~-~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d----~~~~rl~~a~~~Ga~   73 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHACRR-GGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTD----LSATRLSKAKEIGAD   73 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHHHH-HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEE----SCHHHHHHHHHTTCS
T ss_pred             CCHHHHHHHH-HHHHHHHHHHH-hCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEecc----CCHHHHHHHHHhCCc
Confidence            3678888774 78899999875 89999999999998 9999999999999999 566665    689999999999999


Q ss_pred             EEEeCCcccHH---HHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          240 EVFTESQLEVK---NVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       240 ~v~~~~~~~~~---~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +++++.+.+..   .....+.+.+ +|++|||+|++.. +.++++++++|+++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~g~g-~Dvvid~~G~~~~~~~a~~~~~~gG~iv  125 (171)
T d1pl8a2          74 LVLQISKESPQEIARKVEGQLGCK-PEVTIECTGAEASIQAGIYATRSGGTLV  125 (171)
T ss_dssp             EEEECSSCCHHHHHHHHHHHHTSC-CSEEEECSCCHHHHHHHHHHSCTTCEEE
T ss_pred             ccccccccccccccccccccCCCC-ceEEEeccCCchhHHHHHHHhcCCCEEE
Confidence            99998766432   2222334444 9999999999876 99999999999975

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.80  E-value=5.9e-19  Score=139.57  Aligned_cols=119  Identities=16%  Similarity=0.211  Sum_probs=99.1

Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      +++++||.+. ++.+||+++.+ .++++|++|+|+|+ |++|++++|+++.+|++|+++.    .+++|+++++++|++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a~~~-~~~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~----~~~~r~~~a~~~ga~~   73 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHACRR-AGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTA----RSPRRLEVAKNCGADV   73 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHHHH-HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHHH-HHHHHHHHHHH-hCCCCCCEEEEEcc-cccchhhHhhHhhhcccccccc----hHHHHHHHHHHcCCcE
Confidence            4688888774 78899999965 88999999999986 9999999999999999999988    6899999999999998


Q ss_pred             EEeCCcc--cH----HHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          241 VFTESQL--EV----KNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       241 v~~~~~~--~~----~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      .++.+..  +.    +.+.+.. +.+ +|++|||+|++.. +.++++++++|+++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~-g~g-~D~vid~~g~~~~~~~a~~~~~~~G~iv  126 (170)
T d1e3ja2          74 TLVVDPAKEEESSIIERIRSAI-GDL-PNVTIDCSGNEKCITIGINITRTGGTLM  126 (170)
T ss_dssp             EEECCTTTSCHHHHHHHHHHHS-SSC-CSEEEECSCCHHHHHHHHHHSCTTCEEE
T ss_pred             EEeccccccccchhhhhhhccc-ccC-CceeeecCCChHHHHHHHHHHhcCCceE
Confidence            7765432  22    2333333 334 9999999999875 99999999999985

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.80  E-value=4e-19  Score=140.17  Aligned_cols=119  Identities=21%  Similarity=0.193  Sum_probs=103.4

Q ss_pred             CChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          161 SPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      +++++||+++++++|||++++. .++++|++|+|+|+ |++|++++++++..|++|+++.    .+++++++++++|++.
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~-~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~----~~~~r~~~~k~~Ga~~   74 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVD----IGDEKLELAKELGADL   74 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccC----CCHHHhhhhhhcCcce
Confidence            5899999999999999999975 88999999999987 9999999999999999998887    6899999999999999


Q ss_pred             EEeCCccc-HHHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCCCeeC
Q 023007          241 VFTESQLE-VKNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFREEQW  288 (288)
Q Consensus       241 v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~G~~v  288 (288)
                      ++++.+.+ .+.+++.+++   .|.+++++++.. ++.++++++++|+++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~a~~~l~~~G~i~  121 (168)
T d1rjwa2          75 VVNPLKEDAAKFMKEKVGG---VHAAVVTAVSKPAFQSAYNSIRRGGACV  121 (168)
T ss_dssp             EECTTTSCHHHHHHHHHSS---EEEEEESSCCHHHHHHHHHHEEEEEEEE
T ss_pred             ecccccchhhhhcccccCC---CceEEeecCCHHHHHHHHHHhccCCceE
Confidence            99998765 4567777775   555555666555 599999999999975

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.79  E-value=6.5e-19  Score=140.17  Aligned_cols=119  Identities=18%  Similarity=0.166  Sum_probs=102.0

Q ss_pred             ChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       162 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      ++++||.+++++.|+|+++.+.+++++|++|+|+|+ |++|++++++++..|+ +|+++.    .+++|+++++++|+++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~----~~~~k~~~a~~~Ga~~   76 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVD----INKDKFAKAKEVGATE   76 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC----SCGGGHHHHHHTTCSE
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeec----CcHHHHHHHHHhCCee
Confidence            578899999999999999999999999999999999 8999999999999997 555554    5899999999999999


Q ss_pred             EEeCCc--ccHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCe
Q 023007          241 VFTESQ--LEVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREE  286 (288)
Q Consensus       241 v~~~~~--~~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~  286 (288)
                      ++++.+  ...+...+.+.+.| +|++|||+|.+.. +.++.+++++|.
T Consensus        77 ~i~~~~~~~~~~~~~~~~~~~G-~D~vid~~G~~~~~~~a~~~~~~~~g  124 (176)
T d2jhfa2          77 CVNPQDYKKPIQEVLTEMSNGG-VDFSFEVIGRLDTMVTALSCCQEAYG  124 (176)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSC-BSEEEECSCCHHHHHHHHHHBCTTTC
T ss_pred             EEecCCchhHHHHHHHHHhcCC-CCEEEecCCchhHHHHHHHHHhcCCc
Confidence            998754  34566666666655 9999999999887 888999988743

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.79  E-value=1.1e-20  Score=148.86  Aligned_cols=111  Identities=24%  Similarity=0.278  Sum_probs=92.6

Q ss_pred             chHHHHH---HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc
Q 023007          172 NPLTALR---MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE  248 (288)
Q Consensus       172 ~~~ta~~---~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~  248 (288)
                      +++|||.   +|.+.+..+++++|||+|++|++|.+++|+|+.+|++|++++    +++++.++++++|+++++++++..
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~----~s~~k~~~~~~lGad~vi~~~~~~   79 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVAST----GNREAADYLKQLGASEVISREDVY   79 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEE----SSSSTHHHHHHHTCSEEEEHHHHC
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEe----cCHHHHHHHHhhcccceEeccchh
Confidence            4667764   455656677889999999999999999999999999999999    678899999999999999876543


Q ss_pred             HHHHHHHhcCCCCccEEEECCCcccHHHHHhhccCCCeeC
Q 023007          249 VKNVKGLLANLPEPALGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       249 ~~~i~~~~~~~g~~D~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      .+.+ ..+.+.+ +|+|||++|++.++.++++|+++|++|
T Consensus        80 ~~~~-~~~~~~g-vd~vid~vgg~~~~~~~~~l~~~G~iv  117 (167)
T d1tt7a2          80 DGTL-KALSKQQ-WQGAVDPVGGKQLASLLSKIQYGGSVA  117 (167)
T ss_dssp             SSCC-CSSCCCC-EEEEEESCCTHHHHHHHTTEEEEEEEE
T ss_pred             chhh-hcccCCC-ceEEEecCcHHHHHHHHHHhccCceEE
Confidence            2233 2334444 999999999999999999999999985

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.79  E-value=8.4e-19  Score=139.32  Aligned_cols=120  Identities=16%  Similarity=0.181  Sum_probs=102.7

Q ss_pred             ChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE
Q 023007          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (288)
Q Consensus       162 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v  241 (288)
                      ++++||.+++++.|+|+++.+.+++++|++|+|+|+ |++|+.+++.++..|+..+++++   .+++|++.++++|++++
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~---~~~~rl~~a~~~GAd~~   77 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVD---LNPDKFEKAKVFGATDF   77 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC---SCGGGHHHHHHTTCCEE
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeec---chHHHHHHHHHcCCcEE
Confidence            578999999999999999988899999999999998 99999999999999986555544   58999999999999999


Q ss_pred             EeCCcc--cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCe
Q 023007          242 FTESQL--EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREE  286 (288)
Q Consensus       242 ~~~~~~--~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~  286 (288)
                      +|+.+.  ..+.+.+.+.+.| +|++|||+|+... ..++.+++++|.
T Consensus        78 in~~~~~~~~~~~~~~~~~~G-~d~vid~~G~~~~~~~a~~~~~~g~~  124 (175)
T d1cdoa2          78 VNPNDHSEPISQVLSKMTNGG-VDFSLECVGNVGVMRNALESCLKGWG  124 (175)
T ss_dssp             ECGGGCSSCHHHHHHHHHTSC-BSEEEECSCCHHHHHHHHHTBCTTTC
T ss_pred             EcCCCcchhHHHHHHhhccCC-cceeeeecCCHHHHHHHHHHhhCCCc
Confidence            998654  3567777776665 9999999999776 888888877643

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=1.4e-19  Score=143.03  Aligned_cols=117  Identities=17%  Similarity=0.161  Sum_probs=98.5

Q ss_pred             ChhhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE
Q 023007          162 PMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV  241 (288)
Q Consensus       162 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v  241 (288)
                      +.+.||.+.+++.|+|+++++ .++++|++|+|+|+ |++|++++|+++.+|++|+++.    .+++|+++++++|++++
T Consensus         2 p~e~AApl~cag~Ta~~al~~-~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~----~~~~k~~~a~~lGa~~~   75 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVIS----RSSRKREDAMKMGADHY   75 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE----SSSTTHHHHHHHTCSEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHH-hCcCCCCEEEEECC-CCcchhHHHHhhhccccccccc----cchhHHHHhhccCCcEE
Confidence            456788999999999999975 89999999999998 9999999999999999999987    57889999999999999


Q ss_pred             EeCCcccHHHHHHHhcCCCCccEEEECCCccc---HHHHHhhccCCCeeC
Q 023007          242 FTESQLEVKNVKGLLANLPEPALGFNCVGGNS---ASKVLKFLRFREEQW  288 (288)
Q Consensus       242 ~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~~~---~~~a~~~l~~~G~~v  288 (288)
                      +++.+.. +...... +  ++|.++||++...   ++.++++++++|+++
T Consensus        76 i~~~~~~-~~~~~~~-~--~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv  121 (168)
T d1piwa2          76 IATLEEG-DWGEKYF-D--TFDLIVVCASSLTDIDFNIMPKAMKVGGRIV  121 (168)
T ss_dssp             EEGGGTS-CHHHHSC-S--CEEEEEECCSCSTTCCTTTGGGGEEEEEEEE
T ss_pred             eeccchH-HHHHhhh-c--ccceEEEEecCCccchHHHHHHHhhccceEE
Confidence            9986543 1222222 2  4999999988643   478999999999985

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.78  E-value=9.2e-19  Score=141.41  Aligned_cols=119  Identities=13%  Similarity=0.054  Sum_probs=103.3

Q ss_pred             hhhcccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe
Q 023007          164 EYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (288)
Q Consensus       164 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~  243 (288)
                      ++.++++.++.|||+++. .+++++|++|+|+|+ |++|++++++++.+|+..+++++   .+++|++.++++|++++++
T Consensus         2 ~d~~~l~d~~~ta~~a~~-~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d---~~~~rl~~a~~~Ga~~~~~   76 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGD---LNPARLAHAKAQGFEIADL   76 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEE---SCHHHHHHHHHTTCEEEET
T ss_pred             chHHhcccHHHHHHHHHH-HhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeec---ccchhhHhhhhccccEEEe
Confidence            466788889999999986 499999999999998 99999999999999996555554   5899999999999999999


Q ss_pred             CCccc-HHHHHHHhcCCCCccEEEECCCcc----------------cHHHHHhhccCCCeeC
Q 023007          244 ESQLE-VKNVKGLLANLPEPALGFNCVGGN----------------SASKVLKFLRFREEQW  288 (288)
Q Consensus       244 ~~~~~-~~~i~~~~~~~g~~D~v~d~~g~~----------------~~~~a~~~l~~~G~~v  288 (288)
                      +.+.+ .+.+.++|++.| +|++|||+|.+                .++.++++++++|+++
T Consensus        77 ~~~~~~~~~i~~~t~g~g-~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~  137 (195)
T d1kola2          77 SLDTPLHEQIAALLGEPE-VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIG  137 (195)
T ss_dssp             TSSSCHHHHHHHHHSSSC-EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEE
T ss_pred             CCCcCHHHHHHHHhCCCC-cEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEE
Confidence            87654 578899999877 99999999953                3599999999999974

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.72  E-value=1.1e-16  Score=122.64  Aligned_cols=135  Identities=19%  Similarity=0.217  Sum_probs=105.3

Q ss_pred             cceEEEEccC--CCC-CcceEEEEcCCCCCCCCeEEEEEeEEecChHHHHHHhCCCCCCCCCCcccccceEEEEEEecCC
Q 023007           47 PSKAVVYERE--GPP-DSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPAVGGYEGVGEVYSVGSA  123 (288)
Q Consensus        47 ~~~a~~~~~~--g~~-~~~~~~~~~~~p~~~~~evlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~  123 (288)
                      +.|+|++.+.  |.+ .+++++++.+.|++++|||+||+.|.++++..+......     ..+.++..+++|+|++  ++
T Consensus         3 ~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~~-----~~g~~~~g~~vg~Vv~--S~   75 (147)
T d1v3va1           3 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKRL-----KEGAVMMGQQVARVVE--SK   75 (147)
T ss_dssp             EEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGGS-----CTTSBCCCCEEEEEEE--ES
T ss_pred             ccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccccc-----ccCCccccceEEEEEE--eC
Confidence            4588999886  333 356999999999999999999999999999876544321     2345677789999988  77


Q ss_pred             CCCCCCCCEEEecCCCCcccceEEEeeCCcEEEcCCCCCh-----hhhcccccchHHH-HHHHHhhcCCCCCCeEEE
Q 023007          124 VTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKVSKDSPM-----EYAATIIVNPLTA-LRMLEDFTTLNSGDSIVQ  194 (288)
Q Consensus       124 ~~~~~~Gd~V~~~~~~~G~~a~~~~~~~~~l~~ip~~~~~-----~~aa~l~~~~~ta-~~~l~~~~~~~~g~~vlI  194 (288)
                      +++|++||+|++.    ++|+||.+.+...+.++|++.+.     ...+++....+|| |..+.  ...+.|+||++
T Consensus        76 ~~~f~~GD~V~g~----~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getvv~  146 (147)
T d1v3va1          76 NSAFPAGSIVLAQ----SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAVVT  146 (147)
T ss_dssp             CTTSCTTCEEEEC----CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEEEE
T ss_pred             CCcccCCCEEEEc----cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhh--CCCCCCCEEEe
Confidence            8899999999975    58999999999999999876543     2355666677775 44664  44577999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=1.8e-15  Score=102.04  Aligned_cols=74  Identities=26%  Similarity=0.302  Sum_probs=67.0

Q ss_pred             CChhhhcccccchHHHHHHHH---hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC
Q 023007          161 SPMEYAATIIVNPLTALRMLE---DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG  237 (288)
Q Consensus       161 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g  237 (288)
                      +|+++|+.++++++|||.+++   +....+++++|+|+|++|++|.+++|+++.+|++|++++    .++++.++++++|
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t----~s~~k~~~~~~lG   76 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVS----GRESTHEYLKSLG   76 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEE----SCGGGHHHHHHHT
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEE----CCHHHHHHHHHCC
Confidence            588999999999999998765   445678999999999999999999999999999999999    6899999999987


Q ss_pred             C
Q 023007          238 A  238 (288)
Q Consensus       238 ~  238 (288)
                      +
T Consensus        77 A   77 (77)
T d1o8ca2          77 A   77 (77)
T ss_dssp             E
T ss_pred             C
Confidence            4

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=1e-05  Score=65.87  Aligned_cols=80  Identities=14%  Similarity=0.141  Sum_probs=59.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++....+.-+-.+.+.+.+..+..|++|++|
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~----r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilV   81 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVS----RTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE----CCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEE
Confidence            689999999999999999999999999999988    467766544 456544333333233355666666666799999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      ++.|.
T Consensus        82 nnAg~   86 (244)
T d1pr9a_          82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99875

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=1.4e-05  Score=65.03  Aligned_cols=80  Identities=15%  Similarity=0.093  Sum_probs=58.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++....+.-+-.+.+.+.+.....|++|++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~----r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilV   79 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVT----RTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLV   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEE
Confidence            589999999999999999999999999999998    466665544 455543333322223345666666666799999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      +|.|.
T Consensus        80 nnAg~   84 (242)
T d1cyda_          80 NNAAL   84 (242)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99884

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.00  E-value=5.9e-06  Score=64.75  Aligned_cols=78  Identities=10%  Similarity=0.016  Sum_probs=54.9

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-h----CCCC-EEEeCCcccHHHHHHHhcC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-G----LGAD-EVFTESQLEVKNVKGLLAN  258 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~----~g~~-~v~~~~~~~~~~i~~~~~~  258 (288)
                      .--+|++++|+|++|++|...++.+...|++|+++.+    ++++.+.+. +    .... ...|-.+  .+.+.+..+ 
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-   91 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR----KLDKAQAAADSVNKRFKVNVTAAETAD--DASRAEAVK-   91 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHHHHHHHHHHTCCCEEEECCS--HHHHHHHTT-
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhccc----chHHHHHHHHHHHhccchhhhhhhccc--HHHHHHHhc-
Confidence            3457899999999999999999999999999999984    566654442 1    2221 2233222  245555554 


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                        ++|++|+|.|.
T Consensus        92 --~iDilin~Ag~  102 (191)
T d1luaa1          92 --GAHFVFTAGAI  102 (191)
T ss_dssp             --TCSEEEECCCT
T ss_pred             --CcCeeeecCcc
Confidence              49999999874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=2.4e-05  Score=63.68  Aligned_cols=79  Identities=16%  Similarity=0.174  Sum_probs=54.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.    .++++.+.+.+ .+..... .+....+.+.......+++|+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~----r~~~~l~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATD----INESKLQELEKYPGIQTRV-LDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHGGGGGSTTEEEEE-CCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHhccCCceee-eeccccccccccccccccceeEE
Confidence            679999999999999999999999999999998    56777766554 4432222 22111222222222233599999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      +|.|.
T Consensus        80 n~ag~   84 (245)
T d2ag5a1          80 NVAGF   84 (245)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99885

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.83  E-value=2.8e-05  Score=63.41  Aligned_cols=81  Identities=17%  Similarity=0.107  Sum_probs=56.5

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEE-EeCCc-ccHHH-HHHHhcCCCCcc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEV-FTESQ-LEVKN-VKGLLANLPEPA  263 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~-i~~~~~~~g~~D  263 (288)
                      -+|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+..++++...+ .|-.+ ..++. +.+..+..|++|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   78 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL----RPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVD   78 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----STTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCC
Confidence            36899999999999999999999999999998884    5566667777775443 22222 22222 222222234699


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|++.|.
T Consensus        79 iLVnnAG~   86 (248)
T d2d1ya1          79 VLVNNAAI   86 (248)
T ss_dssp             EEEECCCC
T ss_pred             eEEEeCcC
Confidence            99999884

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.82  E-value=6e-05  Score=61.11  Aligned_cols=80  Identities=15%  Similarity=0.185  Sum_probs=55.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE-EeCCc-ccHHHH-HHHhcCCCCcc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV-FTESQ-LEVKNV-KGLLANLPEPA  263 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v-~~~~~-~~~~~i-~~~~~~~g~~D  263 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++...+ .|-.+ ..++.+ .+.....|++|
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~----r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   79 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACD----IEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLD   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCce
Confidence            579999999999999999999999999999998    467776654 55665443 22222 222221 12222223599


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      ++|+|.|.
T Consensus        80 ilVnnAG~   87 (242)
T d1ulsa_          80 GVVHYAGI   87 (242)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999885

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.80  E-value=6.5e-05  Score=57.65  Aligned_cols=92  Identities=13%  Similarity=0.169  Sum_probs=67.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC---------------------cc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES---------------------QL  247 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~---------------------~~  247 (288)
                      .-+|+|+|+ |.+|+.|+..|+.+|++|.+..    .+.++++.+++++...+....                     ..
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D----~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~  103 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATD----VRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKK  103 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCSTTHHHHHHTTCEECCC-----------------------CC
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEe----ccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHH
Confidence            369999999 9999999999999999999997    578888899988875542110                     00


Q ss_pred             cHHHHHHHhcCCCCccEEEECC---Cc--cc-H-HHHHhhccCCCeeC
Q 023007          248 EVKNVKGLLANLPEPALGFNCV---GG--NS-A-SKVLKFLRFREEQW  288 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d~~---g~--~~-~-~~a~~~l~~~G~~v  288 (288)
                      ..+.+.+....   .|+||-++   |.  +. . +..++.|+||..+|
T Consensus       104 ~~~~l~~~l~~---aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIV  148 (183)
T d1l7da1         104 QAEAVLKELVK---TDIAITTALIPGKPAPVLITEEMVTKMKPGSVII  148 (183)
T ss_dssp             HHHHHHHHHTT---CSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEE
T ss_pred             HHHHHHHHHHh---hhhheeeeecCCcccceeehHHHHHhcCCCcEEE
Confidence            11334444443   99999986   22  22 2 88899999998875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.76  E-value=4.3e-05  Score=62.61  Aligned_cols=78  Identities=14%  Similarity=0.152  Sum_probs=54.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEEE---eCCc-ccH----HHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVF---TESQ-LEV----KNVKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v~---~~~~-~~~----~~i~~~  255 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+    .+++.+.....   |-.+ ..+    +.+.+.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r----~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR----NEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999984    555543    44566655432   2211 122    233333


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      .++  .+|++++|.|.
T Consensus        81 ~~g--~idilinnag~   94 (258)
T d1ae1a_          81 FDG--KLNILVNNAGV   94 (258)
T ss_dssp             TTS--CCCEEEECCCC
T ss_pred             hCC--CcEEEeccccc
Confidence            333  59999999886

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.75  E-value=7.7e-06  Score=65.26  Aligned_cols=105  Identities=15%  Similarity=0.114  Sum_probs=70.6

Q ss_pred             chHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEEEeCCcc
Q 023007          172 NPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEVFTESQL  247 (288)
Q Consensus       172 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v~~~~~~  247 (288)
                      +.+.|.  +.+..++++|++||.+|+  +.|..++.+++..|.+|+.+.    ..++..+.    ++++|.+.+.....+
T Consensus        64 P~~~a~--ml~~L~l~~g~~VLeIGs--GsGY~taila~l~g~~V~~ie----~~~~l~~~a~~~l~~~g~~nv~~~~gd  135 (215)
T d1jg1a_          64 PHMVAI--MLEIANLKPGMNILEVGT--GSGWNAALISEIVKTDVYTIE----RIPELVEFAKRNLERAGVKNVHVILGD  135 (215)
T ss_dssp             HHHHHH--HHHHHTCCTTCCEEEECC--TTSHHHHHHHHHHCSCEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred             hhhHHH--HHHhhccCccceEEEecC--CCChhHHHHHHhhCceeEEEe----ccHHHHHHHHHHHHHcCCceeEEEECc
Confidence            444454  334578999999999998  567888888888888898887    35554444    456787654332221


Q ss_pred             cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          248 EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      ..+.   +... +.+|.|+-+.+-+.. +..++.|++||++|
T Consensus       136 ~~~g---~~~~-~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv  173 (215)
T d1jg1a_         136 GSKG---FPPK-APYDVIIVTAGAPKIPEPLIEQLKIGGKLI  173 (215)
T ss_dssp             GGGC---CGGG-CCEEEEEECSBBSSCCHHHHHTEEEEEEEE
T ss_pred             cccC---Cccc-CcceeEEeecccccCCHHHHHhcCCCCEEE
Confidence            1000   1111 259998887776665 88899999999985

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.71  E-value=5e-05  Score=57.47  Aligned_cols=89  Identities=16%  Similarity=0.090  Sum_probs=65.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC--EEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ..+|+|+|+ |..|+.|++.|+.+|++|.+..    .+.++++.++.....  .....+.   +.+.+....   .|+||
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D----~~~~~l~~l~~~~~~~~~~~~~~~---~~l~~~~~~---aDivI  100 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFD----INVERLSYLETLFGSRVELLYSNS---AEIETAVAE---ADLLI  100 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHHT---CSEEE
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEe----CcHHHHHHHHHhhcccceeehhhh---hhHHHhhcc---CcEEE
Confidence            479999999 9999999999999999999998    688888888764322  2222222   234444443   99999


Q ss_pred             ECCC---c--ccH--HHHHhhccCCCeeC
Q 023007          267 NCVG---G--NSA--SKVLKFLRFREEQW  288 (288)
Q Consensus       267 d~~g---~--~~~--~~a~~~l~~~G~~v  288 (288)
                      .++=   .  +.+  ...++.|+||..+|
T Consensus       101 ~aalipG~~aP~lIt~~mv~~Mk~GSVIV  129 (168)
T d1pjca1         101 GAVLVPGRRAPILVPASLVEQMRTGSVIV  129 (168)
T ss_dssp             ECCCCTTSSCCCCBCHHHHTTSCTTCEEE
T ss_pred             EeeecCCcccCeeecHHHHhhcCCCcEEE
Confidence            9863   2  222  88899999998765

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.70  E-value=0.00013  Score=58.70  Aligned_cols=74  Identities=14%  Similarity=0.160  Sum_probs=53.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.    .++++.   ++.+...+.-.-...++.+.+..   |++|++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~----r~~~~l---~~~~~~~~~~Dv~~~~~~~~~~~---g~iD~lVn   72 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICA----RNEELL---KRSGHRYVVCDLRKDLDLLFEKV---KEVDILVL   72 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHH---HHTCSEEEECCTTTCHHHHHHHS---CCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHH---HhcCCcEEEcchHHHHHHHHHHh---CCCcEEEe
Confidence            579999999999999999999999999999988    466544   45565443322222344554433   35999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      +.|.
T Consensus        73 nAG~   76 (234)
T d1o5ia_          73 NAGG   76 (234)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9885

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.68  E-value=0.00013  Score=59.47  Aligned_cols=83  Identities=16%  Similarity=0.152  Sum_probs=53.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEE----EeCC-c-ccHHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEV----FTES-Q-LEVKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v----~~~~-~-~~~~~-i~~~~~~~  259 (288)
                      +|++|+|+|+++++|.+.+..+...|++|+++.+... .++..+.++ ..+...+    .|-. + ..++. +.......
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC-CHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcc-cHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999988999999999987654 344444333 3443332    1221 1 12222 22222222


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|++++|.|.
T Consensus        83 g~iDilvnnAG~   94 (254)
T d1sbya1          83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEeCCCC
Confidence            359999999985

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.65  E-value=6.3e-05  Score=61.45  Aligned_cols=80  Identities=18%  Similarity=0.246  Sum_probs=54.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEEEeC-C--c-ccHHHHHH-HhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVFTE-S--Q-LEVKNVKG-LLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v~~~-~--~-~~~~~i~~-~~~~  258 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+    .+++.|....... +  + ..++.+.+ ....
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~----r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSD----INADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEE----SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999998    4555544    3456665543221 1  1 22222222 2222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++++|.|.
T Consensus        86 ~g~iDilvnnAG~   98 (255)
T d1fmca_          86 LGKVDILVNNAGG   98 (255)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             cCCCCEeeeCCcC
Confidence            2359999999885

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.64  E-value=0.00023  Score=57.67  Aligned_cols=82  Identities=18%  Similarity=0.171  Sum_probs=56.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeC---Cc-ccHHHH-HHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTE---SQ-LEVKNV-KGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~---~~-~~~~~i-~~~~~~~g~~  262 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.+..  .++..+.+++.|.......   .+ ..++.+ .+.....|++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~--~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--CHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc--hHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999999987642  3444556677886543221   11 222222 2222223469


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |+++++.|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=0.00017  Score=58.65  Aligned_cols=80  Identities=16%  Similarity=0.179  Sum_probs=54.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCC--c-ccHHHH-HHHhcCCCCc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTES--Q-LEVKNV-KGLLANLPEP  262 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~--~-~~~~~i-~~~~~~~g~~  262 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+. +++-...+.-+  + ..++.+ .+..+..|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~----r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICD----KDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999987    5677776664 44432222211  1 222222 2222223469


Q ss_pred             cEEEECCCc
Q 023007          263 ALGFNCVGG  271 (288)
Q Consensus       263 D~v~d~~g~  271 (288)
                      |++|++.|.
T Consensus        81 DilVnnAG~   89 (250)
T d1ydea1          81 DCVVNNAGH   89 (250)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEecccc
Confidence            999999883

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.63  E-value=4.1e-05  Score=63.04  Aligned_cols=80  Identities=16%  Similarity=0.231  Sum_probs=52.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCC---CCEEE--eCCc-ccHHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLG---ADEVF--TESQ-LEVKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g---~~~v~--~~~~-~~~~~-i~~~~~~~  259 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++   ....+  |-.+ ..++. +.+..+..
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~----r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIAD----IADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            679999999999999999999999999999988    466666544 3333   22222  2111 22222 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|++|+|.|.
T Consensus        81 g~iD~lVnnAG~   92 (268)
T d2bgka1          81 GKLDIMFGNVGV   92 (268)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCcceecccccc
Confidence            469999999884

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.63  E-value=8e-05  Score=62.40  Aligned_cols=84  Identities=18%  Similarity=0.154  Sum_probs=55.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-----CCHHHH----HHHHhCCCCEEEeCCcc-cHH-HHHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-----GSDEAK----EKLKGLGADEVFTESQL-EVK-NVKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-----~~~~~~----~~~~~~g~~~v~~~~~~-~~~-~i~~~~  256 (288)
                      +|++++|+|+++++|.+.++.+...|++|++......     ..++..    +.+...+.....+..+. ..+ .+....
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            5899999999999999999999999999988743211     122232    23344555555554432 222 233333


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      +..|++|++|++.|.
T Consensus        86 ~~~G~iDiLVnNAGi  100 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGI  100 (302)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCcc
Confidence            344569999999884

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.63  E-value=8.1e-05  Score=60.93  Aligned_cols=80  Identities=13%  Similarity=0.108  Sum_probs=53.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEEE---eCCc-ccHHHH-HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEVF---TESQ-LEVKNV-KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v~---~~~~-~~~~~i-~~~~~~  258 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.    +++.+.....   |-.+ ..++.+ .+..+.
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~----r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCS----RNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999988    45655543    3445544332   2111 222222 222222


Q ss_pred             CC-CccEEEECCCc
Q 023007          259 LP-EPALGFNCVGG  271 (288)
Q Consensus       259 ~g-~~D~v~d~~g~  271 (288)
                      .+ ++|+++++.|.
T Consensus        83 ~~~~idilvnnAG~   96 (259)
T d2ae2a_          83 FHGKLNILVNNAGI   96 (259)
T ss_dssp             TTTCCCEEEECCCC
T ss_pred             hCCCceEEEECCce
Confidence            22 59999999884

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=8.5e-05  Score=60.25  Aligned_cols=80  Identities=20%  Similarity=0.191  Sum_probs=54.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEE-E--eCCcc-cHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEV-F--TESQL-EVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v-~--~~~~~-~~~~-i~~~~~~  258 (288)
                      .|++++|+|+++++|...+..+...|++|+++.    .++++++.+    ++.|.... +  |-.+. .++. +......
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~----r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWD----INKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            589999999999999998888888899999998    466665433    45665432 2  22221 2222 2222233


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++++|.|.
T Consensus        82 ~g~idilinnag~   94 (244)
T d1yb1a_          82 IGDVSILVNNAGV   94 (244)
T ss_dssp             TCCCSEEEECCCC
T ss_pred             cCCCceeEeeccc
Confidence            4469999999985

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.61  E-value=9.4e-05  Score=60.55  Aligned_cols=80  Identities=19%  Similarity=0.188  Sum_probs=53.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEEE---eCC-cccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEVF---TES-QLEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v~---~~~-~~~~~~-i~~~~~~  258 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.    +++.|.+...   |-. ...++. +......
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~----r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLD----MNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999988    45665543    3456655332   211 122222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        80 ~g~iDilVnnaG~   92 (260)
T d1zema1          80 FGKIDFLFNNAGY   92 (260)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCeehhhhcc
Confidence            3469999999874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.61  E-value=8.6e-05  Score=60.79  Aligned_cols=78  Identities=14%  Similarity=0.172  Sum_probs=52.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEE---EeCCc-ccHHH----HHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEV---FTESQ-LEVKN----VKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v---~~~~~-~~~~~----i~~~  255 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+    ++.+....   .|-.+ ..++.    +.+.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~----r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCA----RNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999988    456655433    34444322   22222 22222    2222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      .++  .+|++++|.|.
T Consensus        83 ~~g--~idilvnnAG~   96 (259)
T d1xq1a_          83 FGG--KLDILINNLGA   96 (259)
T ss_dssp             HTT--CCSEEEEECCC
T ss_pred             hCC--Ccccccccccc
Confidence            233  59999999985

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=4e-05  Score=62.79  Aligned_cols=80  Identities=13%  Similarity=0.177  Sum_probs=53.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCC-CEEE----eCC-cccHHH-HHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGA-DEVF----TES-QLEVKN-VKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~-~~v~----~~~-~~~~~~-i~~~~  256 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.    .++++.+.    +++.+. ..++    |-. ++.++. +....
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~----r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCA----RTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999988    46666554    344443 2322    222 222222 22222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|++|+|.|.
T Consensus        85 ~~~g~iD~lVnnAg~   99 (257)
T d1xg5a_          85 SQHSGVDICINNAGL   99 (257)
T ss_dssp             HHHCCCSEEEECCCC
T ss_pred             HhcCCCCEEEecccc
Confidence            222359999999986

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.60  E-value=0.00018  Score=58.58  Aligned_cols=80  Identities=19%  Similarity=0.192  Sum_probs=55.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCc----ccHHHHHH-HhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQ----LEVKNVKG-LLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~----~~~~~i~~-~~~~~g~  261 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++...+...-+    ..++.+.+ .....|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   80 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSD----INEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            679999999999999999999999999999887    466666544 5677655433222    12222222 2222346


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|+++++.|.
T Consensus        81 iDilVnnAG~   90 (253)
T d1hxha_          81 LNVLVNNAGI   90 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCeEEecccc
Confidence            9999999985

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.58  E-value=0.00022  Score=57.77  Aligned_cols=80  Identities=15%  Similarity=0.126  Sum_probs=54.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE---eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF---TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~---~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++.....   |-.+ ..++. +.+.....|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGD----ILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGG   80 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            579999999999999999999999999999988    466666544 566644332   2111 22222 2222222335


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++++|.|.
T Consensus        81 idilinnAG~   90 (244)
T d1nffa_          81 LHVLVNNAGI   90 (244)
T ss_dssp             CCEEEECCCC
T ss_pred             CeEEEECCcc
Confidence            9999999985

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.58  E-value=9.5e-05  Score=60.37  Aligned_cols=79  Identities=16%  Similarity=0.200  Sum_probs=53.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEEEeC---Cc-ccHHHH-HHHhcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVFTE---SQ-LEVKNV-KGLLANL  259 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v~~~---~~-~~~~~i-~~~~~~~  259 (288)
                      |+.+||+|+++++|.+.++.+...|++|+++.    .++++.+    .+++.|.......   .+ ..++.+ .+.....
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~----r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCA----RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY   77 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            67789999999999999999999999999998    4555554    3356665543221   11 223222 2223334


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|++|+|.|.
T Consensus        78 g~iDilVnnAG~   89 (257)
T d2rhca1          78 GPVDVLVNNAGR   89 (257)
T ss_dssp             CSCSEEEECCCC
T ss_pred             CCCCEEEecccc
Confidence            469999999885

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.58  E-value=4.1e-05  Score=62.17  Aligned_cols=80  Identities=20%  Similarity=0.308  Sum_probs=54.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE---EeCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV---FTESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v---~~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++....   .|-.+ ..++. +.+.....|+
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~----r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTA----TSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGE   78 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE----SSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence            589999999999999999999999999999888    466666544 45554322   22222 22222 2333333446


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|+++++.|.
T Consensus        79 iDilVnnAg~   88 (243)
T d1q7ba_          79 VDILVNNAGI   88 (243)
T ss_dssp             CSEEEECCCC
T ss_pred             cceehhhhhh
Confidence            9999999874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.56  E-value=0.00016  Score=58.90  Aligned_cols=80  Identities=14%  Similarity=0.117  Sum_probs=55.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEEE---eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVF---TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~---~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+ ..++++.....   |-.+ ..++. +.+.....|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~----r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   79 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIAD----INLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGS   79 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEE----SCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            579999999999999999999999999999987    4566654 44677765432   2111 22222 2222222336


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|+++++.|.
T Consensus        80 iDilVnnAg~   89 (256)
T d1k2wa_          80 IDILVNNAAL   89 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             ccEEEeeccc
Confidence            9999999884

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.56  E-value=0.00018  Score=58.63  Aligned_cols=80  Identities=16%  Similarity=0.133  Sum_probs=54.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEEE---eCC-cccHHHHHH-HhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVF---TES-QLEVKNVKG-LLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~---~~~-~~~~~~i~~-~~~~~g~  261 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+ ..++++.....   |-. ...++.+.+ .....|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLAD----VLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999888    4566554 44677754332   211 122222222 2222336


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        80 iDilVnnAg~   89 (254)
T d1hdca_          80 VDGLVNNAGI   89 (254)
T ss_dssp             CCEEEECCCC
T ss_pred             ccEEEecCcc
Confidence            9999999885

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.55  E-value=7.5e-05  Score=60.84  Aligned_cols=80  Identities=18%  Similarity=0.221  Sum_probs=54.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEEE---eCCc-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEVF---TESQ-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v~---~~~~-~~~~~-i~~~~~~  258 (288)
                      +++.++|+|+++++|.+.++.+...|++|+++.    .++++.+    .+++.|.+...   |-.+ ..++. +.+..+.
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~----r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICIS----RTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEE----SSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEE----CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            478999999999999999998889999999988    4565554    34556654332   2111 22222 2222333


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|+++++.|.
T Consensus        85 ~g~iDilvnnag~   97 (251)
T d2c07a1          85 HKNVDILVNNAGI   97 (251)
T ss_dssp             CSCCCEEEECCCC
T ss_pred             cCCceeeeecccc
Confidence            4469999999875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.55  E-value=9.2e-05  Score=61.10  Aligned_cols=80  Identities=16%  Similarity=0.225  Sum_probs=52.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC--E--EE--eCCc-ccHHH-HHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD--E--VF--TESQ-LEVKN-VKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~--~--v~--~~~~-~~~~~-i~~~  255 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+    ++.+..  .  .+  |-.+ ..++. +.+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~----r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITG----RNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT   78 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHH
Confidence            589999999999999999999999999999998    456655433    444432  1  12  2222 22222 2222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|+++++.|.
T Consensus        79 ~~~~G~iDilVnnAG~   94 (274)
T d1xhla_          79 LAKFGKIDILVNNAGA   94 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCceEEEeeccc
Confidence            2223359999999874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.54  E-value=0.00016  Score=58.87  Aligned_cols=84  Identities=15%  Similarity=0.145  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcc---cHHHHHH-HhcCCCC
Q 023007          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQL---EVKNVKG-LLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~i~~-~~~~~g~  261 (288)
                      +|++++|+|++|  ++|.+.++.+...|++|+++.+.+...++..+..+..+....+..+-.   .++.+.+ .....|+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            589999999977  799999988888999998877432111111223334554444433222   2222211 1222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|+++++.|.
T Consensus        87 iDilVnnag~   96 (256)
T d1ulua_          87 LDYLVHAIAF   96 (256)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999875

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.53  E-value=7.6e-05  Score=61.55  Aligned_cols=80  Identities=15%  Similarity=0.176  Sum_probs=53.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC--EE--E--eCCc-ccHHH-HHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD--EV--F--TESQ-LEVKN-VKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~--~v--~--~~~~-~~~~~-i~~~  255 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+    ++.+..  .+  +  |-.+ ..++. +.+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~----r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   79 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITG----RSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   79 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHH
Confidence            579999999999999999999999999999998    466665433    344421  11  2  2222 22222 2222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|++|++.|.
T Consensus        80 ~~~~g~iDilvnnAG~   95 (272)
T d1xkqa_          80 LKQFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHhCCceEEEeCCcc
Confidence            2223469999999875

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.53  E-value=0.00013  Score=59.66  Aligned_cols=84  Identities=20%  Similarity=0.194  Sum_probs=54.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE---eCC-cccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF---TES-QLEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~---~~~-~~~~~~-i~~~~~~~g~  261 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.+.....++..+.+ ++.|.+...   |-. ...++. +.+.....|+
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999986533222222222 445654332   211 122322 2222333446


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|+|.|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.52  E-value=6.6e-05  Score=61.17  Aligned_cols=80  Identities=18%  Similarity=0.154  Sum_probs=52.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCC--C-EEE--eCCc-ccHHH-HHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGA--D-EVF--TESQ-LEVKN-VKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~--~-~v~--~~~~-~~~~~-i~~~~~~~  259 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+ ++++.  . ..+  |-.+ ..++. +.+.....
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITG----RHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999988    466666544 33331  2 222  2111 12222 22222223


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      |++|++|+|.|.
T Consensus        81 G~iDiLVnnAg~   92 (251)
T d1zk4a1          81 GPVSTLVNNAGI   92 (251)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            369999999875

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.50  E-value=0.00034  Score=56.82  Aligned_cols=80  Identities=19%  Similarity=0.180  Sum_probs=53.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH-----HHhCCCCEEE---eCCc-ccHHHH-HHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK-----LKGLGADEVF---TESQ-LEVKNV-KGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~-----~~~~g~~~v~---~~~~-~~~~~i-~~~~~  257 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.+    ++++.+.     .++.|.+...   |-.+ ..++.+ .+...
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r----~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR----NLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999984    5555432     2345654332   2222 222222 22222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|+|.|.
T Consensus        80 ~~g~iDiLVnnAG~   93 (251)
T d1vl8a_          80 KFGKLDTVVNAAGI   93 (251)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence            23359999999885

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.48  E-value=0.00013  Score=59.81  Aligned_cols=80  Identities=13%  Similarity=0.142  Sum_probs=52.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCC--EE--E--eCCc-ccHHH-HHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGAD--EV--F--TESQ-LEVKN-VKGL  255 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~--~v--~--~~~~-~~~~~-i~~~  255 (288)
                      +|+.++|+|+++++|.+.++.+...|++|+++.    .++++.+.+    ++.+..  .+  +  |-.+ ..++. +.+.
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~----r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~   79 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITG----RHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   79 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence            579999999999999999999999999999998    466665433    344422  12  2  2222 22222 2222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|++++|.|.
T Consensus        80 ~~~~g~iDilvnnAG~   95 (264)
T d1spxa_          80 LGKFGKLDILVNNAGA   95 (264)
T ss_dssp             HHHHSCCCEEEECCC-
T ss_pred             HHHhCCCCEeeccccc
Confidence            2223469999999885

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.48  E-value=0.00042  Score=56.43  Aligned_cols=83  Identities=22%  Similarity=0.198  Sum_probs=55.6

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEEEe-CC--c-ccHH-HHHHHh
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVFT-ES--Q-LEVK-NVKGLL  256 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v~~-~~--~-~~~~-~i~~~~  256 (288)
                      .-.|+++||+|+++++|.+.++.+...|++|+++.+.   +++..    +.+++.|.+.+.. .+  + ..++ .+....
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~---~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   79 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGS---SSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV   79 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCC---ChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHH
Confidence            3468999999999999999999999999999987653   44443    3445677654422 22  1 1221 122222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|+++++.|.
T Consensus        80 ~~~g~idilinnag~   94 (259)
T d1ja9a_          80 SHFGGLDFVMSNSGM   94 (259)
T ss_dssp             HHHSCEEEEECCCCC
T ss_pred             HHcCCCcEEEecccc
Confidence            223359999999985

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.46  E-value=0.00033  Score=56.48  Aligned_cols=80  Identities=18%  Similarity=0.215  Sum_probs=55.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH-HHHhCCCCEEEeC---Cc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE-KLKGLGADEVFTE---SQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~---~~-~~~~~-i~~~~~~~g~  261 (288)
                      .|++++|+|+++++|.+.++-+...|++|+++.    .++++.+ ..++++.......   .+ +..++ +....+..|+
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVD----REERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999998    4566554 5567886543221   11 12222 2222222235


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|++|++.|.
T Consensus        80 iDiLinnAg~   89 (241)
T d2a4ka1          80 LHGVAHFAGV   89 (241)
T ss_dssp             CCEEEEGGGG
T ss_pred             ccEecccccc
Confidence            9999999875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.46  E-value=0.00026  Score=58.31  Aligned_cols=80  Identities=15%  Similarity=0.150  Sum_probs=54.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEE---eCCc-ccHHH-HHHHhcCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVF---TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~---~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++++.+ ++++.....   |-.+ ..++. +.......|+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~----r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLD----KSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGK   79 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999998    466766544 456644322   2222 12222 2222222346


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|+++++.|.
T Consensus        80 idilvnnAG~   89 (276)
T d1bdba_          80 IDTLIPNAGI   89 (276)
T ss_dssp             CCEEECCCCC
T ss_pred             cccccccccc
Confidence            9999999883

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.45  E-value=5.6e-05  Score=61.92  Aligned_cols=80  Identities=16%  Similarity=0.057  Sum_probs=51.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhC--CCCEE-E--eCCc-ccHHHH-HHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGL--GADEV-F--TESQ-LEVKNV-KGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~--g~~~v-~--~~~~-~~~~~i-~~~~  256 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+    .+.  +...+ +  |-.+ ..++.+ .+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~----r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   78 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVD----VSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   78 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999988    466665433    222  22222 1  2222 222222 2222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|++|++.|.
T Consensus        79 ~~~G~iDiLVnnAG~   93 (258)
T d1iy8a_          79 ERFGRIDGFFNNAGI   93 (258)
T ss_dssp             HHHSCCSEEEECCCC
T ss_pred             HHhCCCCEEEECCcc
Confidence            222359999999873

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.44  E-value=0.00024  Score=58.13  Aligned_cols=81  Identities=15%  Similarity=0.263  Sum_probs=53.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHH----HHHHHhCCCCEEE---eCC-cccHHHH-HHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEA----KEKLKGLGADEVF---TES-QLEVKNV-KGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~----~~~~~~~g~~~v~---~~~-~~~~~~i-~~~~~~  258 (288)
                      +|++++|+|+++++|.+.++.+...|++|+++.+.   .+++    .+.+++.|.+...   |-. ...++.+ .+..+.
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~---~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRS---KEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57999999999999999998888999999999853   3333    3345567765332   211 1222222 222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|++|++.|.
T Consensus        83 ~G~iDiLVnnAG~   95 (261)
T d1geea_          83 FGKLDVMINNAGL   95 (261)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEeecccee
Confidence            2359999999885

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=4.4e-05  Score=62.34  Aligned_cols=80  Identities=13%  Similarity=0.165  Sum_probs=52.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhC----C-CCEE---EeCCc-ccHHH-HHHHh
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGL----G-ADEV---FTESQ-LEVKN-VKGLL  256 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~----g-~~~v---~~~~~-~~~~~-i~~~~  256 (288)
                      .|+++||+|+++++|.+.++.+...|++|+++.    .++++.+.+ +++    + ....   .|-.+ ..++. +....
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~----r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVD----WNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV   77 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            589999999999999999999999999999998    456655433 222    2 1221   12222 12222 22222


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...|++|+++++.|.
T Consensus        78 ~~~G~iDilVnnAg~   92 (254)
T d2gdza1          78 DHFGRLDILVNNAGV   92 (254)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCcCeecccccc
Confidence            223369999999985

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.42  E-value=0.00019  Score=58.46  Aligned_cols=78  Identities=18%  Similarity=0.090  Sum_probs=51.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH----HHhCCCCEEE---eCCc-ccHHH-HHHHhcCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEK----LKGLGADEVF---TESQ-LEVKN-VKGLLANLP  260 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v~---~~~~-~~~~~-i~~~~~~~g  260 (288)
                      +.+||+|+++++|.+.++.+...|++|+++.    .++++.+.    +++.|.+...   |-.+ ..++. +....+..|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~----r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIAD----YNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG   77 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            3469999999999999988888999999988    45665543    3556655332   2211 12222 222233344


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|++|+|.|.
T Consensus        78 ~iDilVnnAG~   88 (255)
T d1gega_          78 GFDVIVNNAGV   88 (255)
T ss_dssp             CCCEEEECCCC
T ss_pred             CccEEEecccc
Confidence            69999999885

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.41  E-value=0.00039  Score=57.62  Aligned_cols=80  Identities=16%  Similarity=0.198  Sum_probs=52.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-----HhCCCCEE-EeCC--c-ccHHH-HHHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-----KGLGADEV-FTES--Q-LEVKN-VKGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----~~~g~~~v-~~~~--~-~~~~~-i~~~~~  257 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.+    ++++.+.+     ++.|.... +..+  + ..++. +.....
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r----~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR----KMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----CHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC----CHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            5799999999999999999999999999999984    55554322     23444433 2221  1 12222 222223


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..+++|++++|.|.
T Consensus       100 ~~g~iDilvnnAg~  113 (294)
T d1w6ua_         100 VAGHPNIVINNAAG  113 (294)
T ss_dssp             HTCSCSEEEECCCC
T ss_pred             hccccchhhhhhhh
Confidence            33469999999885

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=0.00019  Score=56.18  Aligned_cols=75  Identities=19%  Similarity=0.143  Sum_probs=53.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      .++|+|+||+|.+|...+..+...|.+|+++++    ++++.......+. .++..+-.+.+.+.+...+   +|+||.|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R----~~~~~~~~~~~~~-~~~~gD~~d~~~l~~al~~---~d~vi~~   74 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR----DSSRLPSEGPRPA-HVVVGDVLQAADVDKTVAG---QDAVIVL   74 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES----CGGGSCSSSCCCS-EEEESCTTSHHHHHHHHTT---CSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEc----Chhhccccccccc-ccccccccchhhHHHHhcC---CCEEEEE
Confidence            478999999999999999988889999999994    5555433323333 3333333344566665554   9999999


Q ss_pred             CCc
Q 023007          269 VGG  271 (288)
Q Consensus       269 ~g~  271 (288)
                      +|.
T Consensus        75 ~g~   77 (205)
T d1hdoa_          75 LGT   77 (205)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            985

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.38  E-value=0.00021  Score=57.95  Aligned_cols=78  Identities=22%  Similarity=0.204  Sum_probs=51.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHhCCCC--EEE--eCCc-ccH----HHHHHHhc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGAD--EVF--TESQ-LEV----KNVKGLLA  257 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~g~~--~v~--~~~~-~~~----~~i~~~~~  257 (288)
                      .++|||+|+++++|.+.++.+...|+  +|+.+.    +++++.+.+++....  +++  |-.+ ..+    +.+.+..+
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~----R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATA----RDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEE----SSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEe----CCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            38999999999999998888777786  577777    466676667664432  222  2222 122    33433333


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      .. ++|++|+|.|.
T Consensus        79 ~~-~idilinnAG~   91 (250)
T d1yo6a1          79 SD-GLSLLINNAGV   91 (250)
T ss_dssp             GG-CCCEEEECCCC
T ss_pred             CC-CeEEEEEcCcc
Confidence            32 39999999984

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.37  E-value=0.00043  Score=56.65  Aligned_cols=83  Identities=11%  Similarity=0.063  Sum_probs=53.4

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCC--c-ccH-HHHHHHhcCCC
Q 023007          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTES--Q-LEV-KNVKGLLANLP  260 (288)
Q Consensus       188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~--~-~~~-~~i~~~~~~~g  260 (288)
                      +|+++||+|++|  ++|.+.++.+...|++|+++.++.. .+++.+.+. +.+...++...  . ... +.+.+.....|
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            589999999876  7999999999999999999986532 334444443 33332232222  1 112 22333333344


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      ++|+++++.|.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            69999999885

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.37  E-value=2.3e-05  Score=62.36  Aligned_cols=98  Identities=16%  Similarity=0.089  Sum_probs=64.9

Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccHHHHHH
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~i~~  254 (288)
                      .+..++++|++||-+|+  +.|..++.+++..|  .+|+++.    .+++..+.++    ..+.+.+.....+. ...  
T Consensus        68 l~~l~l~~g~~VLdiG~--GtG~~s~~la~~~~~~g~V~~id----~~~~~~~~a~~~~~~~~~~n~~~~~~d~-~~~--  138 (213)
T d1dl5a1          68 MEWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVE----YSRKICEIAKRNVERLGIENVIFVCGDG-YYG--  138 (213)
T ss_dssp             HHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEESCG-GGC--
T ss_pred             HHhhhccccceEEEecC--ccchhHHHHHHHhCCCCcEEEee----cchhhHHHhhhhHhhhcccccccccCch-HHc--
Confidence            34578999999999998  34888888998876  4677776    4677666554    45544332111110 000  


Q ss_pred             HhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      +... +.||+|+.+.+-+.. +..++.|+|||++|
T Consensus       139 ~~~~-~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv  172 (213)
T d1dl5a1         139 VPEF-SPYDVIFVTVGVDEVPETWFTQLKEGGRVI  172 (213)
T ss_dssp             CGGG-CCEEEEEECSBBSCCCHHHHHHEEEEEEEE
T ss_pred             cccc-cchhhhhhhccHHHhHHHHHHhcCCCcEEE
Confidence            0111 249999988776665 88889999999985

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=0.00017  Score=59.38  Aligned_cols=77  Identities=14%  Similarity=0.151  Sum_probs=49.3

Q ss_pred             CCCeE-EEeCCCChHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCC-EEE--eCCc-ccH----HHHH
Q 023007          188 SGDSI-VQNGATSIVGQCIIQ-IARHRGIHSINIIRDRAGSDEAKE----KLKGLGAD-EVF--TESQ-LEV----KNVK  253 (288)
Q Consensus       188 ~g~~v-lI~g~~g~vG~~a~~-la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~-~v~--~~~~-~~~----~~i~  253 (288)
                      .|++| ||+|+++++|.+.++ +++..|++|+++.+    ++++.+    .+++.+.. .++  |-.+ ..+    +.+.
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~   76 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR----DVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLR   76 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES----SHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEEC----CHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHH
Confidence            47788 899999999998765 56666999999994    565554    33444543 222  2212 112    2333


Q ss_pred             HHhcCCCCccEEEECCCc
Q 023007          254 GLLANLPEPALGFNCVGG  271 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~  271 (288)
                      +..   |++|++|++.|-
T Consensus        77 ~~~---g~iDiLVnNAGi   91 (275)
T d1wmaa1          77 KEY---GGLDVLVNNAGI   91 (275)
T ss_dssp             HHH---SSEEEEEECCCC
T ss_pred             Hhc---CCcEEEEEcCCc
Confidence            322   359999999984

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.30  E-value=0.00062  Score=51.60  Aligned_cols=69  Identities=10%  Similarity=0.143  Sum_probs=47.7

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHHHHHHhcCCCC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      .++.++++|+|+|+ |+.+.+++..++..|+ ++.++.    ++.++.+.+. .++...+ +....          .  +
T Consensus        12 ~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~n----R~~~ka~~L~~~~~~~~~-~~~~~----------~--~   73 (167)
T d1npya1          12 YHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYA----RNVKTGQYLAALYGYAYI-NSLEN----------Q--Q   73 (167)
T ss_dssp             TTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEEC----SCHHHHHHHHHHHTCEEE-SCCTT----------C--C
T ss_pred             cCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEec----ccHHHHHHHHHhhhhhhh-hcccc----------c--c
Confidence            55667899999999 9999999999999998 455555    5777776554 4554322 21111          1  3


Q ss_pred             ccEEEECCC
Q 023007          262 PALGFNCVG  270 (288)
Q Consensus       262 ~D~v~d~~g  270 (288)
                      +|++|||+.
T Consensus        74 ~DliINaTp   82 (167)
T d1npya1          74 ADILVNVTS   82 (167)
T ss_dssp             CSEEEECSS
T ss_pred             hhhheeccc
Confidence            788888764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.29  E-value=0.001  Score=54.47  Aligned_cols=81  Identities=16%  Similarity=0.178  Sum_probs=54.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH----HHHHhCCCCEEEeC-C--c-ccHHH-HHHHhcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK----EKLKGLGADEVFTE-S--Q-LEVKN-VKGLLAN  258 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~----~~~~~~g~~~v~~~-~--~-~~~~~-i~~~~~~  258 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.+.   +++..    +.+++.+.+..... +  + ..++. +.+....
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~---~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN---STESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC---chHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999988742   34433    34456676544322 2  1 12222 2222222


Q ss_pred             CCCccEEEECCCc
Q 023007          259 LPEPALGFNCVGG  271 (288)
Q Consensus       259 ~g~~D~v~d~~g~  271 (288)
                      .|++|+++++.|.
T Consensus        94 ~g~idilV~nag~  106 (272)
T d1g0oa_          94 FGKLDIVCSNSGV  106 (272)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCcccccccc
Confidence            2359999999875

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.28  E-value=0.00076  Score=54.87  Aligned_cols=81  Identities=19%  Similarity=0.184  Sum_probs=52.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-----HhCCCCEEEeC---Cc-ccHHHH-HHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-----KGLGADEVFTE---SQ-LEVKNV-KGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-----~~~g~~~v~~~---~~-~~~~~i-~~~~~  257 (288)
                      +|+++||+|+++++|.+.++.+...|++|+++.+.   .+++.+.+     ...|.......   .+ ..++.+ .+..+
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~---~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG---DAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS---CHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999998753   23333322     23454433222   11 222222 22222


Q ss_pred             CCCCccEEEECCCc
Q 023007          258 NLPEPALGFNCVGG  271 (288)
Q Consensus       258 ~~g~~D~v~d~~g~  271 (288)
                      ..|++|++|++.|.
T Consensus        80 ~~G~iDiLVnnAG~   93 (260)
T d1x1ta1          80 QMGRIDILVNNAGI   93 (260)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HhCCCcEEEeeccc
Confidence            23469999999885

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.27  E-value=0.00054  Score=55.34  Aligned_cols=81  Identities=16%  Similarity=0.192  Sum_probs=48.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHH---HcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE--eCCc-ccHH----HHHHHhcCC
Q 023007          190 DSIVQNGATSIVGQCIIQIAR---HRGIHSINIIRDRAGSDEAKEKLKGLGADEVF--TESQ-LEVK----NVKGLLANL  259 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~---~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~--~~~~-~~~~----~i~~~~~~~  259 (288)
                      +||||+|+++++|.+.++.+.   ..|++|+++.++....++-.+..+.-+--.++  |-.+ ..++    .+..... .
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~-~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK-D   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG-G
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh-c
Confidence            689999999999999776554   45899999997654333333333332222222  2222 2233    2332222 2


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +++|++|++.|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            259999999874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.24  E-value=0.00075  Score=47.53  Aligned_cols=88  Identities=9%  Similarity=-0.119  Sum_probs=59.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe-CCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT-ESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~-~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .|++|||.|+ |.+|..-++.+...|++++++...  .+++...++++-.....-. +.+.+       ..   ++++|+
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~--~~~~~~~~~~~~~i~~~~~~~~~~d-------l~---~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALT--FIPQFTVWANEGMLTLVEGPFDETL-------LD---SCWLAI   77 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESS--CCHHHHHHHTTTSCEEEESSCCGGG-------GT---TCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecc--CChHHHHHHhcCCceeeccCCCHHH-------hC---CCcEEe
Confidence            4789999999 999999999999999999998754  3555555554433322211 11111       11   389999


Q ss_pred             ECCCcccH-HHHHhhccCCCeeC
Q 023007          267 NCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       267 d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      -|++.+.. ....+..++.|.+|
T Consensus        78 ~at~d~~~n~~i~~~a~~~~ilV  100 (113)
T d1pjqa1          78 AATDDDTVNQRVSDAAESRRIFC  100 (113)
T ss_dssp             ECCSCHHHHHHHHHHHHHTTCEE
T ss_pred             ecCCCHHHHHHHHHHHHHcCCEE
Confidence            99999887 45556666666553

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.0012  Score=54.74  Aligned_cols=81  Identities=21%  Similarity=0.211  Sum_probs=52.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----Hh-C----CCCEEE---eCCc-ccHHH-H
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KG-L----GADEVF---TESQ-LEVKN-V  252 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~-~----g~~~v~---~~~~-~~~~~-i  252 (288)
                      -+|++++|+|+++++|.+.++.+...|++|+++.    .++++.+.+    ++ +    +...+.   |-.+ ..++. +
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~----r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   85 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIAS----RKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   85 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence            4789999999999999999999999999999998    456555432    21 1    223221   2111 22222 2


Q ss_pred             HHHhcCCCCccEEEECCCc
Q 023007          253 KGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~  271 (288)
                      .+.....|++|++|++.|.
T Consensus        86 ~~~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHhCCeEEEEeeccc
Confidence            2222223359999999885

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.0011  Score=54.04  Aligned_cols=43  Identities=21%  Similarity=0.309  Sum_probs=37.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~  233 (288)
                      =+|+++||+|+++++|.+.++.+...|++|+++.    .++++++.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~----r~~~~l~~~   54 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTA----RSKETLQKV   54 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHH
Confidence            4689999999999999999998888999999999    567776544

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.22  E-value=0.00091  Score=54.17  Aligned_cols=87  Identities=20%  Similarity=0.253  Sum_probs=54.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCC---CCHHHHHHHHhCCCCEEE-eCCcc---cHHHHHHHh
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRA---GSDEAKEKLKGLGADEVF-TESQL---EVKNVKGLL  256 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~---~~~~~~~~~~~~g~~~v~-~~~~~---~~~~i~~~~  256 (288)
                      ..+|+.++||+|+++++|.+.++.+...|++ ++.+.+...   ..++..+.++..|....+ .-+-.   .++.+.+..
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            4688999999999999999988888888996 555543211   122333455667754322 11212   233333333


Q ss_pred             cCCCCccEEEECCCc
Q 023007          257 ANLPEPALGFNCVGG  271 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~  271 (288)
                      ...+.+|.++++.|.
T Consensus        85 ~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          85 GDDVPLSAVFHAAAT   99 (259)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             ccccccccccccccc
Confidence            333458999999884

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.22  E-value=0.0013  Score=53.16  Aligned_cols=84  Identities=20%  Similarity=0.137  Sum_probs=54.1

Q ss_pred             CCCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCCEEEeCCccc---H-HHHHHHhcCC
Q 023007          187 NSGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLE---V-KNVKGLLANL  259 (288)
Q Consensus       187 ~~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~~v~~~~~~~---~-~~i~~~~~~~  259 (288)
                      -+|+++||+|+++  ++|.+.+..+...|++|+++.+++. ..++. +.....+....+......   . +.........
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            3689999999988  7888888999999999998886532 23333 333455544443332221   1 2233334444


Q ss_pred             CCccEEEECCCc
Q 023007          260 PEPALGFNCVGG  271 (288)
Q Consensus       260 g~~D~v~d~~g~  271 (288)
                      +.+|+.+++.+.
T Consensus        82 ~~~d~~v~~a~~   93 (258)
T d1qsga_          82 PKFDGFVHSIGF   93 (258)
T ss_dssp             SSEEEEEECCCC
T ss_pred             cccceEEEeecc
Confidence            568999998765

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.20  E-value=0.00028  Score=57.30  Aligned_cols=74  Identities=9%  Similarity=-0.056  Sum_probs=48.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcc--cHHHHHHHhcCCCCccE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQL--EVKNVKGLLANLPEPAL  264 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~--~~~~i~~~~~~~g~~D~  264 (288)
                      |++|+|+++++|.+.++.+...|++|+++.+    +.++.+.++    .+....+.+..+-  .++.+.+.   .|++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r----~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~---~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDE----SFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSA---YGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCG----GGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHH---HSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEEC----CHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHH---cCCCCE
Confidence            7899999999999999988899999988874    334443332    3333334333221  12333333   335999


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      +|+|.|.
T Consensus        75 LVnNAg~   81 (252)
T d1zmta1          75 LVSNDIF   81 (252)
T ss_dssp             EEEECCC
T ss_pred             EEECCcC
Confidence            9998763

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.00043  Score=52.66  Aligned_cols=51  Identities=16%  Similarity=0.064  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 023007          178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       178 ~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~  233 (288)
                      .+|.+..-..+|++|+|+|+ |+.+.+++..+..+|++++++.    ++.++.+.+
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~n----Rt~~ka~~l   57 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITN----RTVSRAEEL   57 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SSHHHHHHH
T ss_pred             HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEecc----chHHHHHHH
Confidence            34555455568899999999 9999999999999999977776    466666544

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.18  E-value=0.00096  Score=54.51  Aligned_cols=98  Identities=15%  Similarity=0.066  Sum_probs=65.1

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCCCC-EEEeCCcccHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQLEVKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~i  252 (288)
                      +....+++||++||=.|+  +.|..++.+|+..|  .+++.+.    .+++..+.++    .+|.. .+.....+    +
T Consensus        95 Ii~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD----~~~~~~~~A~~~~~~~g~~~~v~~~~~d----~  164 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYE----KREEFAKLAESNLTKWGLIERVTIKVRD----I  164 (266)
T ss_dssp             HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEEC----CCHHHHHHHHHHHHHTTCGGGEEEECCC----G
T ss_pred             HHHhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEe----CCHHHHHHHHHHHHHhccccCcEEEecc----c
Confidence            445589999999998888  44778888898875  5788886    5788776663    56642 22111111    1


Q ss_pred             HHHhcCCCCccEEEECCCccc--HHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVGGNS--ASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~~~--~~~a~~~l~~~G~~v  288 (288)
                      ....... .+|.|+--...+.  ++.+.++|+|||+++
T Consensus       165 ~~~~~~~-~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv  201 (266)
T d1o54a_         165 SEGFDEK-DVDALFLDVPDPWNYIDKCWEALKGGGRFA  201 (266)
T ss_dssp             GGCCSCC-SEEEEEECCSCGGGTHHHHHHHEEEEEEEE
T ss_pred             ccccccc-ceeeeEecCCCHHHHHHHHHhhcCCCCEEE
Confidence            1111222 3888777666644  399999999999985

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.16  E-value=4.5e-05  Score=61.70  Aligned_cols=35  Identities=20%  Similarity=0.195  Sum_probs=32.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .|++++|+|+++++|.+.++.+...|++|+++.+.
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~   40 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG   40 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            68999999999999999999999999999999864

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.08  E-value=0.0015  Score=54.07  Aligned_cols=100  Identities=8%  Similarity=-0.017  Sum_probs=66.4

Q ss_pred             HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccHHHH
Q 023007          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEVKNV  252 (288)
Q Consensus       177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~i  252 (288)
                      ..-+.+.+++++|++||=+|+  +.|..+..+|+..|++|++++    .+++..+.+    ++.|....+.....+.   
T Consensus        50 ~~~~~~~l~l~~G~~VLDiGC--G~G~~~~~~a~~~g~~v~git----~s~~q~~~a~~~~~~~~l~~~v~~~~~d~---  120 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLT----LSENQYAHDKAMFDEVDSPRRKEVRIQGW---  120 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHHSCCSSCEEEEECCG---
T ss_pred             HHHHHHhcCCCCCCEEEEecC--cchHHHHHHHHhcCcceeecc----chHHHHHHHHHHHHhhccchhhhhhhhcc---
Confidence            344556688999999999998  556678899999999999998    577776554    4556432221111110   


Q ss_pred             HHHhcCCCCccEEEEC-----CCc-----------ccHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNC-----VGG-----------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~-----~g~-----------~~~~~a~~~l~~~G~~v  288 (288)
                       ....+  .+|.|+..     ++.           ..++.+.++|+|||+++
T Consensus       121 -~~~~~--~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~  169 (291)
T d1kpia_         121 -EEFDE--PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRML  169 (291)
T ss_dssp             -GGCCC--CCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEE
T ss_pred             -ccccc--ccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceE
Confidence             11122  59988763     332           12477889999999974

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.05  E-value=8.9e-05  Score=59.73  Aligned_cols=34  Identities=18%  Similarity=0.202  Sum_probs=31.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +|++|||+|+++++|.+.++.+...|++|+.+..
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~   34 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDV   34 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            5899999999999999999999999999998864

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.03  E-value=0.0018  Score=48.46  Aligned_cols=79  Identities=14%  Similarity=0.151  Sum_probs=53.4

Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHHHHHHhcC
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLAN  258 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~i~~~~~~  258 (288)
                      .+...--.+++|||+|+ |.+|...++.+...|++ ++++.    ++.++.+ ++++++.. +..+     +.+.+... 
T Consensus        16 ~~~~~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~n----Rt~~ka~~l~~~~~~~-~~~~-----~~~~~~l~-   83 (159)
T d1gpja2          16 ERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVAN----RTYERAVELARDLGGE-AVRF-----DELVDHLA-   83 (159)
T ss_dssp             HHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEEC----SSHHHHHHHHHHHTCE-ECCG-----GGHHHHHH-
T ss_pred             HHHhCCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEc----CcHHHHHHHHHhhhcc-cccc-----hhHHHHhc-
Confidence            33333346689999999 99999999999999996 55555    4555654 56677743 3322     22333333 


Q ss_pred             CCCccEEEECCCccc
Q 023007          259 LPEPALGFNCVGGNS  273 (288)
Q Consensus       259 ~g~~D~v~d~~g~~~  273 (288)
                        .+|+||.|++.+.
T Consensus        84 --~~Divi~atss~~   96 (159)
T d1gpja2          84 --RSDVVVSATAAPH   96 (159)
T ss_dssp             --TCSEEEECCSSSS
T ss_pred             --cCCEEEEecCCCC
Confidence              3999999998753

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=96.98  E-value=0.0017  Score=54.69  Aligned_cols=83  Identities=11%  Similarity=0.110  Sum_probs=53.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC-CCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++++|||+|++|-+|...++.+...|++|+++.+.....+...+..+.. +... +..+-.+.+.+.+...+. .+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~-~~~Dl~d~~~l~~~~~~~-~~~~v~   84 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQS-EIGDIRDQNKLLESIREF-QPEIVF   84 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEE-EECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeE-EEeeccChHhhhhhhhhc-hhhhhh
Confidence            5799999999999999999999999999999987544333332222111 2222 222212234444444332 389999


Q ss_pred             ECCCcc
Q 023007          267 NCVGGN  272 (288)
Q Consensus       267 d~~g~~  272 (288)
                      .+++..
T Consensus        85 ~~aa~~   90 (356)
T d1rkxa_          85 HMAAQP   90 (356)
T ss_dssp             ECCSCC
T ss_pred             hhhccc
Confidence            988754

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=96.96  E-value=0.0016  Score=51.62  Aligned_cols=102  Identities=11%  Similarity=-0.021  Sum_probs=65.5

Q ss_pred             chHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC--CCC--EEEeCCcc
Q 023007          172 NPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL--GAD--EVFTESQL  247 (288)
Q Consensus       172 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~--g~~--~v~~~~~~  247 (288)
                      +...|.  +.+...+++|++||-+|+  +.|..++.+++. +.+|+.+.    .+++..+.+++.  ...  .++..+..
T Consensus        56 p~~~a~--ml~~L~l~~g~~VLdIG~--GsGy~ta~La~l-~~~V~aiE----~~~~~~~~A~~~~~~~~nv~~~~~d~~  126 (224)
T d1vbfa_          56 LNLGIF--MLDELDLHKGQKVLEIGT--GIGYYTALIAEI-VDKVVSVE----INEKMYNYASKLLSYYNNIKLILGDGT  126 (224)
T ss_dssp             HHHHHH--HHHHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEE----SCHHHHHHHHHHHTTCSSEEEEESCGG
T ss_pred             hhhHHH--HHHHhhhcccceEEEecC--CCCHHHHHHHHH-hccccccc----ccHHHHHHHHHHHhcccccccccCchh
Confidence            344444  334578999999999998  356777777765 67888887    577777776542  111  22222211


Q ss_pred             cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          248 EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      .  .   +.. .++||.|+-+.+-+.. +..++.|++||++|
T Consensus       127 ~--g---~~~-~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV  162 (224)
T d1vbfa_         127 L--G---YEE-EKPYDRVVVWATAPTLLCKPYEQLKEGGIMI  162 (224)
T ss_dssp             G--C---CGG-GCCEEEEEESSBBSSCCHHHHHTEEEEEEEE
T ss_pred             h--c---chh-hhhHHHHHhhcchhhhhHHHHHhcCCCCEEE
Confidence            0  0   011 1259998876666555 78889999999985

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.93  E-value=0.0043  Score=46.58  Aligned_cols=79  Identities=13%  Similarity=0.114  Sum_probs=52.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .+++|+|+|+ |.+|..+++.+...|.+|+++.    .+.++.+.+.+ ++...+................   ..|.++
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~d----r~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~i   72 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVAC----RTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA---KHDLVI   72 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEE----SCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHT---TSSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEE----CChHHHHHHHhcccccccccccccchhhhHhhhh---ccceeE
Confidence            3689999999 9999999999999999998888    57777776654 4433333222222222222222   378888


Q ss_pred             ECCCcccH
Q 023007          267 NCVGGNSA  274 (288)
Q Consensus       267 d~~g~~~~  274 (288)
                      .+......
T Consensus        73 ~~~~~~~~   80 (182)
T d1e5qa1          73 SLIPYTFH   80 (182)
T ss_dssp             ECSCGGGH
T ss_pred             eeccchhh
Confidence            88776554

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.92  E-value=0.0021  Score=48.84  Aligned_cols=86  Identities=8%  Similarity=0.012  Sum_probs=57.3

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCC-------cccHHHHHHHhcCCCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTES-------QLEVKNVKGLLANLPE  261 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~-------~~~~~~i~~~~~~~g~  261 (288)
                      .+++.|+|+ |.+|++.+..+...|.+|.++.    .++++.+.+++.+........       ......+.+...   .
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~   72 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWD----IDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK---D   72 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT---T
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc---C
Confidence            368999999 9999999999999999999998    578888877765532211110       000012233223   3


Q ss_pred             ccEEEECCCcccHHHHHhhcc
Q 023007          262 PALGFNCVGGNSASKVLKFLR  282 (288)
Q Consensus       262 ~D~v~d~~g~~~~~~a~~~l~  282 (288)
                      .|++|-|+........++.++
T Consensus        73 aD~iii~v~~~~~~~~~~~i~   93 (184)
T d1bg6a2          73 ADVILIVVPAIHHASIAANIA   93 (184)
T ss_dssp             CSEEEECSCGGGHHHHHHHHG
T ss_pred             CCEEEEEEchhHHHHHHHHhh
Confidence            899999998776655544433

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.90  E-value=0.0051  Score=44.18  Aligned_cols=77  Identities=14%  Similarity=0.162  Sum_probs=57.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK-GLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|+|.|+ |.+|...++.+...|.+|+++.    .++++.+.+. +++.. ++..+..+.+.+.+..-.  ..|.++-++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid----~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~~i~--~a~~vv~~t   73 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLID----IDKDICKKASAEIDAL-VINGDCTKIKTLEDAGIE--DADMYIAVT   73 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEE----SCHHHHHHHHHHCSSE-EEESCTTSHHHHHHTTTT--TCSEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceec----CChhhhhhhhhhhhhh-hccCcccchhhhhhcChh--hhhhhcccC
Confidence            5899999 9999999999999999999998    5788888775 46654 454554444555554322  489999998


Q ss_pred             CcccHH
Q 023007          270 GGNSAS  275 (288)
Q Consensus       270 g~~~~~  275 (288)
                      +++..+
T Consensus        74 ~~d~~N   79 (132)
T d1lssa_          74 GKEEVN   79 (132)
T ss_dssp             SCHHHH
T ss_pred             CcHHHH
Confidence            886653

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.81  E-value=0.00075  Score=54.41  Aligned_cols=78  Identities=21%  Similarity=0.270  Sum_probs=50.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH----HHHhCCCCEE-E--eCCc-ccHHH-HHHHhcCCCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE----KLKGLGADEV-F--TESQ-LEVKN-VKGLLANLPE  261 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~----~~~~~g~~~v-~--~~~~-~~~~~-i~~~~~~~g~  261 (288)
                      -+||+|+++++|.+.++.+...|++|++...   .+++..+    .+++.|.+.. +  |-.+ ..++. +....+..|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~---~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYA---RSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999988753   3444443    3345554432 2  2111 12222 2222333446


Q ss_pred             ccEEEECCCc
Q 023007          262 PALGFNCVGG  271 (288)
Q Consensus       262 ~D~v~d~~g~  271 (288)
                      +|+++++.|.
T Consensus        80 iDiLVnnAg~   89 (244)
T d1edoa_          80 IDVVVNNAGI   89 (244)
T ss_dssp             CSEEEECCCC
T ss_pred             CCcccccccc
Confidence            9999999885

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.79  E-value=0.00074  Score=55.79  Aligned_cols=100  Identities=8%  Similarity=0.019  Sum_probs=66.2

Q ss_pred             HHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccHHHH
Q 023007          177 LRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNV  252 (288)
Q Consensus       177 ~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~i  252 (288)
                      ..-+.+..++++|++||=+|+  +.|..++.+++..|++|++++    .+++..++++    +.|...-+.....+   .
T Consensus        51 ~~~~~~~l~l~~G~~VLDiGC--G~G~~a~~~a~~~g~~v~git----~s~~Q~~~a~~~~~~~g~~~~v~~~~~d---~  121 (285)
T d1kpga_          51 IDLALGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLT----LSKNQANHVQQLVANSENLRSKRVLLAG---W  121 (285)
T ss_dssp             HHHHHTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHTCCCCSCEEEEESC---G
T ss_pred             HHHHHHHcCCCCCCEEEEecC--cchHHHHHHHhcCCcceEEEe----ccHHHHHHHHHHHHhhhhhhhhHHHHhh---h
Confidence            344556688999999999998  668889999999999999999    6888877664    34422111100001   1


Q ss_pred             HHHhcCCCCccEEEE-----CCCcc----cHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFN-----CVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d-----~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      ..+ ++  .+|.|+.     .+|..    .+..+.++|+|+|+++
T Consensus       122 ~~~-~~--~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~  163 (285)
T d1kpga_         122 EQF-DE--PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVML  163 (285)
T ss_dssp             GGC-CC--CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEE
T ss_pred             hcc-cc--cccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEE
Confidence            111 22  4887665     34433    2377888999999974

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.76  E-value=0.014  Score=42.93  Aligned_cols=93  Identities=11%  Similarity=0.121  Sum_probs=65.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHH-HHHHHhCCCCEEEeCCcccH-----------------
Q 023007          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEA-KEKLKGLGADEVFTESQLEV-----------------  249 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~-----------------  249 (288)
                      ++|.|+|+||.+|..+.++.+..  .+++++.+..  ++-++ .+.+++|.+..++..++...                 
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~--~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g   80 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN--RNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAG   80 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES--SCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEES
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC--CCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccC
Confidence            78999999999999999999986  4788888755  34333 45668999998876654322                 


Q ss_pred             -HHHHHHhcCCCCccEEEECCCc-ccHHHHHhhccCCCe
Q 023007          250 -KNVKGLLANLPEPALGFNCVGG-NSASKVLKFLRFREE  286 (288)
Q Consensus       250 -~~i~~~~~~~g~~D~v~d~~g~-~~~~~a~~~l~~~G~  286 (288)
                       +.+.+....  ++|+++++..+ .-+...+..++.+-+
T Consensus        81 ~~~l~~~~~~--~~D~vv~Ai~G~~GL~~tl~ai~~gk~  117 (150)
T d1r0ka2          81 ADALVEAAMM--GADWTMAAIIGCAGLKATLAAIRKGKT  117 (150)
T ss_dssp             HHHHHHHHTS--CCSEEEECCCSGGGHHHHHHHHHTTSE
T ss_pred             ccchheeccc--ccceeeeecCchhHHHHHHHHHhcCCE
Confidence             223333222  48999999655 445777777766543

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.0042  Score=49.16  Aligned_cols=92  Identities=13%  Similarity=0.030  Sum_probs=60.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCCC-----C--EEEeCCcccHHH
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLGA-----D--EVFTESQLEVKN  251 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g~-----~--~v~~~~~~~~~~  251 (288)
                      .+++|++||-.|+  +.|..++.+++..|  .+|+.+.    .+++..+.++    +.+.     .  .+...+...   
T Consensus        73 ~l~~g~~VLdiG~--GsGy~ta~la~l~~~~g~V~~ie----~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~---  143 (224)
T d1i1na_          73 QLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGID----HIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM---  143 (224)
T ss_dssp             TSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEE----SCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG---
T ss_pred             ccCCCCeEEEecC--CCCHHHHHHHHHhCCCceEEEEc----CCHHHHHHHHHhccccCcccccccceEEEEeeccc---
Confidence            7899999999998  56778888888765  4788886    4666665553    2221     1  112111100   


Q ss_pred             HHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          252 VKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                        ..... +.||+|+-+..-+.. +..++.|+|||++|
T Consensus       144 --~~~~~-~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV  178 (224)
T d1i1na_         144 --GYAEE-APYDAIHVGAAAPVVPQALIDQLKPGGRLI  178 (224)
T ss_dssp             --CCGGG-CCEEEEEECSBBSSCCHHHHHTEEEEEEEE
T ss_pred             --ccchh-hhhhhhhhhcchhhcCHHHHhhcCCCcEEE
Confidence              00111 149999887776665 88899999999985

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.73  E-value=0.0055  Score=49.70  Aligned_cols=99  Identities=11%  Similarity=-0.019  Sum_probs=64.0

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHh----C---CCCEEEeCCcccHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG----L---GADEVFTESQLEVK  250 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~----~---g~~~v~~~~~~~~~  250 (288)
                      +....+++||++||=.|+  +.|.++..+|+..|.  +|+.+.    .+++..+.+++    +   ..+.+.....+   
T Consensus        88 Ii~~l~i~PG~~VLE~G~--GsG~lt~~La~~vgp~G~V~~~d----~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d---  158 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGA--GSGALTLSLLRAVGPAGQVISYE----QRADHAEHARRNVSGCYGQPPDNWRLVVSD---  158 (264)
T ss_dssp             HHHHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEEC----SCHHHHHHHHHHHHHHHTSCCTTEEEECSC---
T ss_pred             HHHHhCCCCCCEEEecCc--CCcHHHHHHHHhhCCCcEEEEec----CCHHHHHHHHHhhhhhccCCCceEEEEecc---
Confidence            445689999999997776  668888899998864  777776    57777776642    2   12222111111   


Q ss_pred             HHHHHhcCCCCccEEEECCCccc--HHHHHhhccCCCeeC
Q 023007          251 NVKGLLANLPEPALGFNCVGGNS--ASKVLKFLRFREEQW  288 (288)
Q Consensus       251 ~i~~~~~~~g~~D~v~d~~g~~~--~~~a~~~l~~~G~~v  288 (288)
                       +.+..-..+.+|.||--...+.  +..+.+.|+|+|+++
T Consensus       159 -~~~~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv  197 (264)
T d1i9ga_         159 -LADSELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLM  197 (264)
T ss_dssp             -GGGCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEE
T ss_pred             -cccccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEE
Confidence             1111001124998776666654  388999999999985

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.73  E-value=0.00069  Score=45.94  Aligned_cols=79  Identities=15%  Similarity=0.125  Sum_probs=50.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +|++|+|+|. |..|+++++++...|++|++..+..  +++..+.+++ +....+.....  ..+.       .+|.++-
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~--~~~~~~~~~~-~~~~~~~~~~~--~~~~-------~~d~vi~   70 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRM--TPPGLDKLPE-AVERHTGSLND--EWLM-------AADLIVA   70 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSS--SCTTGGGSCT-TSCEEESBCCH--HHHH-------HCSEEEE
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCc--CchhHHHHhh-ccceeecccch--hhhc-------cCCEEEE
Confidence            5789999999 9999999999999999999997532  2222222222 23333333221  1221       2899998


Q ss_pred             CCCcccHHHHHh
Q 023007          268 CVGGNSASKVLK  279 (288)
Q Consensus       268 ~~g~~~~~~a~~  279 (288)
                      .-|-+.....++
T Consensus        71 SPGi~~~~~~~~   82 (93)
T d2jfga1          71 SPGIALAHPSLS   82 (93)
T ss_dssp             CTTSCTTSHHHH
T ss_pred             CCCCCCCCHHHH
Confidence            888655433333

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.71  E-value=0.0013  Score=52.72  Aligned_cols=76  Identities=17%  Similarity=0.139  Sum_probs=48.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCe-------EEEEEcCCCCCHHHHHHH----HhCCCCEE-E--eCCc-ccHHH-HHHH
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIH-------SINIIRDRAGSDEAKEKL----KGLGADEV-F--TESQ-LEVKN-VKGL  255 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~-------vi~~~~~~~~~~~~~~~~----~~~g~~~v-~--~~~~-~~~~~-i~~~  255 (288)
                      |||+|+++++|.+.+..+...|++       ++.+.    .++++.+.+    ++.|.... +  |-.+ ..++. +.+.
T Consensus         4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~----r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSS----RTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEE----SCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEe----CCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            689999999999988888888987       66666    466665433    44554432 2  2222 22222 2222


Q ss_pred             hcCCCCccEEEECCCc
Q 023007          256 LANLPEPALGFNCVGG  271 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~  271 (288)
                      ....|++|+++++.|.
T Consensus        80 ~~~~g~iDilvnnAg~   95 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGV   95 (240)
T ss_dssp             HHHTSCCSEEEECCCC
T ss_pred             HHHcCCcceeeccccc
Confidence            2334469999999885

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.70  E-value=0.00068  Score=55.86  Aligned_cols=101  Identities=9%  Similarity=0.065  Sum_probs=65.1

Q ss_pred             HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccHHH
Q 023007          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKN  251 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~  251 (288)
                      -+.-+.+..++++|++||=+|+  +.|..+..+++..|++|+++.    .+++..++++    +.|....+.....+   
T Consensus        40 k~~~~~~~l~l~~g~~VLDiGC--G~G~~a~~~a~~~g~~v~gi~----ls~~q~~~a~~~~~~~~l~~~~~~~~~d---  110 (280)
T d2fk8a1          40 KVDLNLDKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLT----LSKNQHARCEQVLASIDTNRSRQVLLQG---  110 (280)
T ss_dssp             HHHHHHTTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHTSCCSSCEEEEESC---
T ss_pred             HHHHHHHHcCCCCCCEEEEecC--CchHHHHHHHHhCceeEEEec----chHHHHHHHHHHHHhhccccchhhhhhh---
Confidence            3445556678999999999999  334566778888899999998    6888877664    34532111111111   


Q ss_pred             HHHHhcCCCCccEEEEC-----CCcc----cHHHHHhhccCCCeeC
Q 023007          252 VKGLLANLPEPALGFNC-----VGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~-----~g~~----~~~~a~~~l~~~G~~v  288 (288)
                      ...+ .+  .+|.|+..     ++.+    .++...++|+|+|+++
T Consensus       111 ~~~~-~~--~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~  153 (280)
T d2fk8a1         111 WEDF-AE--PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMT  153 (280)
T ss_dssp             GGGC-CC--CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred             hhhh-cc--chhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEE
Confidence            0111 22  48887653     3433    2377789999999984

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.69  E-value=0.00056  Score=54.43  Aligned_cols=95  Identities=15%  Similarity=0.192  Sum_probs=55.9

Q ss_pred             cCCCCCCeEEEeCCCCh-HHHHHHHHHHHcC----CeEEEEEcCCCCCHHHHHHHHh---------CCCCEE--EeCCcc
Q 023007          184 TTLNSGDSIVQNGATSI-VGQCIIQIARHRG----IHSINIIRDRAGSDEAKEKLKG---------LGADEV--FTESQL  247 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~-vG~~a~~la~~~g----~~vi~~~~~~~~~~~~~~~~~~---------~g~~~v--~~~~~~  247 (288)
                      ..+++|++||.+|+.++ ....+.+++...|    .+|+.+.    ..++..+.+++         ++...+  +..+..
T Consensus        76 ~~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE----~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~  151 (223)
T d1r18a_          76 DHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIE----HQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGR  151 (223)
T ss_dssp             TTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEE----SCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGG
T ss_pred             hccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEe----cCHHHHHHHHHhhhhcchhhcCccEEEEEecccc
Confidence            37899999999998332 3333444444445    3788886    45655554422         122222  211111


Q ss_pred             cHHHHHHHhcCCCCccEEEECCCcccH-HHHHhhccCCCeeC
Q 023007          248 EVKNVKGLLANLPEPALGFNCVGGNSA-SKVLKFLRFREEQW  288 (288)
Q Consensus       248 ~~~~i~~~~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~G~~v  288 (288)
                      .     ..... +.||.|+-+.+-+.. +..++.|++||++|
T Consensus       152 ~-----~~~~~-~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV  187 (223)
T d1r18a_         152 K-----GYPPN-APYNAIHVGAAAPDTPTELINQLASGGRLI  187 (223)
T ss_dssp             G-----CCGGG-CSEEEEEECSCBSSCCHHHHHTEEEEEEEE
T ss_pred             c-----ccccc-cceeeEEEEeechhchHHHHHhcCCCcEEE
Confidence            0     00111 249988887776665 88889999999985

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.69  E-value=0.0048  Score=46.93  Aligned_cols=48  Identities=15%  Similarity=0.052  Sum_probs=39.1

Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG  235 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~  235 (288)
                      .....+.||.+||..|+  +.|..+..+|+. |++|+++.    .+++..+.+++
T Consensus        13 ~~~l~~~~~~rvLd~GC--G~G~~a~~la~~-G~~V~gvD----~S~~~i~~a~~   60 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAE----LSEAAVERYFT   60 (201)
T ss_dssp             HHHHCCCTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEE----ECHHHHHHHHH
T ss_pred             HHHcCCCCCCEEEEecC--cCCHHHHHHHHc-CCceEeec----ccHHHHHHHHH
Confidence            33457899999999999  557788888875 99999997    58888888864

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.68  E-value=0.00068  Score=54.49  Aligned_cols=100  Identities=19%  Similarity=0.208  Sum_probs=65.9

Q ss_pred             HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCccc
Q 023007          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLE  248 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~  248 (288)
                      -+..+....+++||++||=+|+  +.|..+..+++..|++|+++.    .+++..+.++    +.|..   .+.....  
T Consensus        21 ~~~~l~~~~~l~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD----~s~~~~~~ar~~~~~~gl~~~v~~~~~d~--   92 (245)
T d1nkva_          21 KYATLGRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGID----MSSLFTAQAKRRAEELGVSERVHFIHNDA--   92 (245)
T ss_dssp             HHHHHHHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEE----SCHHHHHHHHHHHHHTTCTTTEEEEESCC--
T ss_pred             HHHHHHHHcCCCCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEe----cccchhhHHHHHHHHhhccccchhhhhHH--
Confidence            3455777789999999998888  445667788888899999887    5777776554    45543   1222111  


Q ss_pred             HHHHHHHhcCCCCccEEEECCC-----c--ccHHHHHhhccCCCeeC
Q 023007          249 VKNVKGLLANLPEPALGFNCVG-----G--NSASKVLKFLRFREEQW  288 (288)
Q Consensus       249 ~~~i~~~~~~~g~~D~v~d~~g-----~--~~~~~a~~~l~~~G~~v  288 (288)
                          .++... +.+|+|+..-.     +  ..+....+.|+|||+++
T Consensus        93 ----~~~~~~-~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~  134 (245)
T d1nkva_          93 ----AGYVAN-EKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIML  134 (245)
T ss_dssp             ----TTCCCS-SCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEE
T ss_pred             ----hhcccc-CceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEE
Confidence                111122 25998886422     2  22377789999999974

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.67  E-value=0.0002  Score=57.45  Aligned_cols=34  Identities=18%  Similarity=0.396  Sum_probs=30.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +.+|||+|+++++|.+.++.+...|++|+.+.+.
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~   35 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS   35 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            4579999999999999999999999999998753

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.64  E-value=0.0023  Score=50.18  Aligned_cols=73  Identities=18%  Similarity=0.259  Sum_probs=48.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCe--EEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIH--SINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~--vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      .||||+|++|.+|...+..+...|.+  ++...    +++++.+.+.. +.. ++..+..+.+.+.+...+   +|.|+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~----R~~~~~~~~~~-~~~-~~~~d~~~~~~~~~~~~~---~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV----RSAQGKEKIGG-EAD-VFIGDITDADSINPAFQG---IDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEE----SCHHHHHHTTC-CTT-EEECCTTSHHHHHHHHTT---CSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEc----CCHHHHHhccC-CcE-EEEeeecccccccccccc---ceeeEE
Confidence            68999999999999999999988865  55555    45655544321 233 222232333455555554   999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      +.+.
T Consensus        75 ~a~~   78 (252)
T d2q46a1          75 LTSA   78 (252)
T ss_dssp             CCCC
T ss_pred             EEee
Confidence            9864

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.01  Score=44.18  Aligned_cols=94  Identities=15%  Similarity=0.048  Sum_probs=65.2

Q ss_pred             HHHHHHhhcC-CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007          176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       176 a~~~l~~~~~-~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~  254 (288)
                      .+.++.+..+ .-.|++++|.|= |-+|...++.++.+|++|+++.    ..+-+.-.+.--|+. +.        .+.+
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e----~dp~~al~A~~dG~~-v~--------~~~~   75 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITE----IDPINALQAAMEGYE-VT--------TMDE   75 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCE-EC--------CHHH
T ss_pred             HHHHHHHHhCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeee----cccchhHHhhcCceE-ee--------ehhh
Confidence            4555555444 568999999999 9999999999999999999997    345443222223332 21        1222


Q ss_pred             HhcCCCCccEEEECCCcccH--HHHHhhccCCCe
Q 023007          255 LLANLPEPALGFNCVGGNSA--SKVLKFLRFREE  286 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~  286 (288)
                      ...   ..|+++-|+|+...  ..-++.|+++-.
T Consensus        76 a~~---~adivvtaTGn~~vI~~eh~~~MKdgaI  106 (163)
T d1li4a1          76 ACQ---EGNIFVTTTGCIDIILGRHFEQMKDDAI  106 (163)
T ss_dssp             HTT---TCSEEEECSSCSCSBCHHHHTTCCTTEE
T ss_pred             hhh---hccEEEecCCCccchhHHHHHhccCCeE
Confidence            222   37999999998654  888899888744

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=96.58  E-value=0.0029  Score=53.14  Aligned_cols=46  Identities=20%  Similarity=0.301  Sum_probs=38.0

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~  233 (288)
                      .-+++|++|||+|++|-+|...+..+...|++|+++++    +.++.+.+
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR----~~~~~~~~   51 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR----SASKLANL   51 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES----SHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeC----CchhHHHH
Confidence            34678999999999999999999888888999999984    55555444

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.51  E-value=0.016  Score=44.03  Aligned_cols=87  Identities=15%  Similarity=0.090  Sum_probs=49.5

Q ss_pred             HHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhC----CCC-EEEeCCcccHHH
Q 023007          178 RMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGL----GAD-EVFTESQLEVKN  251 (288)
Q Consensus       178 ~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~----g~~-~v~~~~~~~~~~  251 (288)
                      .++.....--.+++|+|+|+ |+.+.+++..+...|++.+.++.-...+.++. .+++++    ... .+.+..+  .+.
T Consensus         7 ~~l~~~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~   83 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD--QQA   83 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHH
T ss_pred             HHHHHcCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc--ccc
Confidence            34544333346789999999 99999999888889986555543221223332 223322    221 1222222  223


Q ss_pred             HHHHhcCCCCccEEEECCC
Q 023007          252 VKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~g  270 (288)
                      +.+...   .+|++|||+.
T Consensus        84 ~~~~~~---~~diiIN~Tp   99 (182)
T d1vi2a1          84 FAEALA---SADILTNGTK   99 (182)
T ss_dssp             HHHHHH---TCSEEEECSS
T ss_pred             hhhhhc---ccceeccccC
Confidence            333333   3899999976

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.50  E-value=0.0062  Score=50.40  Aligned_cols=80  Identities=20%  Similarity=0.281  Sum_probs=51.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|||+|++|-+|...++.+...|++|+++.+... ...++...+...+--.++..+-.+.+.+.+...+. ++|+||.+.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-MPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-CCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-CCceEEeec
Confidence            6999999999999999999888999998753211 22333444454443334333322334444444432 389999998


Q ss_pred             Cc
Q 023007          270 GG  271 (288)
Q Consensus       270 g~  271 (288)
                      +.
T Consensus        81 a~   82 (338)
T d1orra_          81 GQ   82 (338)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.46  E-value=0.0053  Score=49.53  Aligned_cols=83  Identities=16%  Similarity=0.126  Sum_probs=52.9

Q ss_pred             CCCCCeEEEeCCC--ChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEE---EeCCc-cc----HHHHHH
Q 023007          186 LNSGDSIVQNGAT--SIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEV---FTESQ-LE----VKNVKG  254 (288)
Q Consensus       186 ~~~g~~vlI~g~~--g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v---~~~~~-~~----~~~i~~  254 (288)
                      +=+|+++||+|++  .++|.+.++-+...|++|+.+.++   .++..+.+ ++++....   .|-.+ ..    .+.+.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~---~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD---RLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECS---CHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCC---hHHHHHHHHHHcCCceeeEeeecccccccccccchhhh
Confidence            3468999999964  469999999899999999998743   33333433 45554321   22221 11    234444


Q ss_pred             HhcCCCCccEEEECCCc
Q 023007          255 LLANLPEPALGFNCVGG  271 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~  271 (288)
                      .....+++|+++++.|.
T Consensus        80 ~~~~~~~ld~~i~~ag~   96 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGF   96 (268)
T ss_dssp             HHCTTCCEEEEEECCCC
T ss_pred             ccccCCCcceeeecccc
Confidence            44444469999999884

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.0056  Score=48.95  Aligned_cols=48  Identities=19%  Similarity=0.210  Sum_probs=38.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH-HHHHhCCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK-EKLKGLGAD  239 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~-~~~~~~g~~  239 (288)
                      +|+.++|+|+++++|.+.++-+...|++|+++.++    +++. +..++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~----~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLP----NSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECT----TSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC----hHHHHHHHHHhCCC
Confidence            68999999999999999999999999999998853    3333 344566654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.42  E-value=0.0045  Score=48.06  Aligned_cols=49  Identities=18%  Similarity=0.247  Sum_probs=41.9

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADE  240 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~  240 (288)
                      -.|++|+|.|- |.+|..+++++...|++++++.    .+.++......+|.+.
T Consensus        25 L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d----~d~~~~~~~~~~g~~~   73 (201)
T d1c1da1          25 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVAD----TDTERVAHAVALGHTA   73 (201)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEec----chHHHHHHHHhhcccc
Confidence            47899999998 9999999999999999998775    4678888877787653

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.41  E-value=0.0039  Score=50.81  Aligned_cols=37  Identities=16%  Similarity=0.144  Sum_probs=30.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE  231 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  231 (288)
                      ++|+|+++++|.+.++.+...|++|+++.+   .++++.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~---~~~~~~~   41 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYH---RSAAEAN   41 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEES---SCHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeC---CCHHHHH
Confidence            589999999999999999999999998875   2444443

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.39  E-value=0.0042  Score=46.97  Aligned_cols=50  Identities=10%  Similarity=0.034  Sum_probs=37.1

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~  233 (288)
                      ++.......++++|+|+|+ |+.+.+++..+...+.+++++.    ++.++.+.+
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~n----R~~~~a~~l   57 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLAN----RTFSKTKEL   57 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEE----SSHHHHHHH
T ss_pred             HHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeecc----chHHHHHHH
Confidence            3444344557899999999 9999998888877777888887    466666544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=96.35  E-value=0.0098  Score=49.60  Aligned_cols=80  Identities=10%  Similarity=0.035  Sum_probs=50.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH---HhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL---KGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~---~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +|||+|++|-+|...+..+...|.+|+++.+............   ..-.+..+ ..+-.+.+.+.+.....+ +|+||.
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~l~~~~~~~~-~d~ViH   79 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFV-EGDIRNEALMTEILHDHA-IDTVIH   79 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEE-ECCTTCHHHHHHHHHHTT-CSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEE-EeecCCHHHHHHHHhccC-CCEEEE
Confidence            4999999999999999999999999999864322223333322   22233322 222222345555444333 999999


Q ss_pred             CCCcc
Q 023007          268 CVGGN  272 (288)
Q Consensus       268 ~~g~~  272 (288)
                      +++..
T Consensus        80 lAa~~   84 (338)
T d1udca_          80 FAGLK   84 (338)
T ss_dssp             CCSCC
T ss_pred             CCCcc
Confidence            98643

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.31  E-value=0.0033  Score=50.65  Aligned_cols=96  Identities=10%  Similarity=-0.015  Sum_probs=61.5

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHH----hCC-CCEEEeCCcccHHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLK----GLG-ADEVFTESQLEVKNVKG  254 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~----~~g-~~~v~~~~~~~~~~i~~  254 (288)
                      ...+++||++||=.|+  +.|.++..+|+..|  .+|+.+.    .+++..+.++    +++ .+.+-..+.+    +.+
T Consensus        79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD----~~e~~~~~A~~n~~~~~~~~nv~~~~~D----i~~  148 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVE----RDEDNLKKAMDNLSEFYDIGNVRTSRSD----IAD  148 (250)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEEC----SCHHHHHHHHHHHHTTSCCTTEEEECSC----TTT
T ss_pred             HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEE----CCHHHHHHHHHHHHHhcCCCceEEEEee----eec
Confidence            4488999999999888  44677778888765  4677776    5777777664    333 3322211211    111


Q ss_pred             HhcCCCCccEEEECCCccc--HHHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGNS--ASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~--~~~a~~~l~~~G~~v  288 (288)
                      ..... .+|.||--...+.  +..+.+.|+|||+++
T Consensus       149 ~~~~~-~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv  183 (250)
T d1yb2a1         149 FISDQ-MYDAVIADIPDPWNHVQKIASMMKPGSVAT  183 (250)
T ss_dssp             CCCSC-CEEEEEECCSCGGGSHHHHHHTEEEEEEEE
T ss_pred             ccccc-eeeeeeecCCchHHHHHHHHHhcCCCceEE
Confidence            11222 4998886555543  499999999999975

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.22  E-value=0.0076  Score=48.39  Aligned_cols=32  Identities=19%  Similarity=0.315  Sum_probs=29.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +.||+|+++++|.+.++.+...|++|+++.+.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~   34 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRH   34 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            57999999999999999999999999999853

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=96.18  E-value=0.014  Score=48.79  Aligned_cols=77  Identities=21%  Similarity=0.264  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC-CCCEEEeCC-cccHHHHHHHhcCCCCccEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GADEVFTES-QLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-g~~~v~~~~-~~~~~~i~~~~~~~g~~D~v  265 (288)
                      +.++|+|+|++|.+|...+..+...|.+|++++++.  +..+...+... +++ ++..+ .+..+.+.....+   +|.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~--~~~~~~~~~~~~~v~-~~~gD~~d~~~~~~~a~~~---~~~~   75 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSL--KGLIAEELQAIPNVT-LFQGPLLNNVPLMDTLFEG---AHLA   75 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCS--CSHHHHHHHTSTTEE-EEESCCTTCHHHHHHHHTT---CSEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCc--chhhhhhhcccCCCE-EEEeeCCCcHHHHHHHhcC---CceE
Confidence            458999999999999999999999999999999753  22333344443 333 33222 1222344444444   7776


Q ss_pred             EECCC
Q 023007          266 FNCVG  270 (288)
Q Consensus       266 ~d~~g  270 (288)
                      +....
T Consensus        76 ~~~~~   80 (350)
T d1xgka_          76 FINTT   80 (350)
T ss_dssp             EECCC
T ss_pred             Eeecc
Confidence            66543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=96.17  E-value=0.015  Score=47.27  Aligned_cols=79  Identities=16%  Similarity=0.229  Sum_probs=52.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCC-CHHHHH---HHHhCCCCEEEeCCcccHHHHHHHhcCCCCccE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAG-SDEAKE---KLKGLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~-~~~~~~---~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      -++|||+|++|-+|...+..+...|.+|+++++.... +..+.+   .+...+++.+ ..+-.+.+.+.+...+   .+.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v-~~d~~d~~~~~~~~~~---~~~   78 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI-EASLDDHQRLVDALKQ---VDV   78 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE-CCCSSCHHHHHHHHTT---CSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEE-EeecccchhhhhhccC---cch
Confidence            4679999999999999999888999999999875432 222222   3344555433 2222233455555554   788


Q ss_pred             EEECCCc
Q 023007          265 GFNCVGG  271 (288)
Q Consensus       265 v~d~~g~  271 (288)
                      ++.+.+.
T Consensus        79 ~~~~~~~   85 (312)
T d1qyda_          79 VISALAG   85 (312)
T ss_dssp             EEECCCC
T ss_pred             hhhhhhh
Confidence            8887754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.15  E-value=0.012  Score=43.74  Aligned_cols=47  Identities=23%  Similarity=0.194  Sum_probs=38.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC-CEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA-DEVF  242 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~-~~v~  242 (288)
                      +|.|+|. |.+|...+..++..|.+|++..    .++++.+.+++.|. +...
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d----~~~~~~~~a~~~~~~~~~~   49 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVS----RQQSTCEKAVERQLVDEAG   49 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTSCSEEE
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEE----CCchHHHHHHHhhccceee
Confidence            5889999 9999998888899999999886    57888888888884 4443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.10  E-value=0.015  Score=41.48  Aligned_cols=77  Identities=13%  Similarity=0.135  Sum_probs=56.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      ++++|.|. |.+|...++.+...|.+++++.    .++++.+.++..+...++ .+....+.+.+..-.  ..|.++-++
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid----~d~~~~~~~~~~~~~~~~-gd~~~~~~l~~a~i~--~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVD----INEEKVNAYASYATHAVI-ANATEENELLSLGIR--NFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEE----SCHHHHHHTTTTCSEEEE-CCTTCTTHHHHHTGG--GCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEec----CcHHHHHHHHHhCCccee-eecccchhhhccCCc--cccEEEEEc
Confidence            45788999 9999999999999999999998    689999888887765443 333333344443222  388888888


Q ss_pred             CcccH
Q 023007          270 GGNSA  274 (288)
Q Consensus       270 g~~~~  274 (288)
                      ++...
T Consensus        73 ~~~~~   77 (134)
T d2hmva1          73 GANIQ   77 (134)
T ss_dssp             CSCHH
T ss_pred             CchHH
Confidence            76543

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.09  E-value=0.0078  Score=45.91  Aligned_cols=94  Identities=14%  Similarity=0.071  Sum_probs=59.3

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EE--EeCCcccHHHHHH
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EV--FTESQLEVKNVKG  254 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v--~~~~~~~~~~i~~  254 (288)
                      ...++++|++||=+|+  +.|..++.+++. +.+|+++.    .+++..+.++    +.|.. .+  +..+   ..... 
T Consensus        27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD----~~~~~l~~a~~n~~~~gl~~~v~~~~gd---a~~~~-   95 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAID----RNPEAISTTEMNLQRHGLGDNVTLMEGD---APEAL-   95 (186)
T ss_dssp             HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEE----SCHHHHHHHHHHHHHTTCCTTEEEEESC---HHHHH-
T ss_pred             HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEec----CCHHHHHHHHHHHHHcCCCcceEEEECc---hhhcc-
Confidence            3468999999998888  445556666664 66888876    5777776664    56652 22  2221   11221 


Q ss_pred             HhcCCCCccEEEECCCcc----cHHHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGGN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~----~~~~a~~~l~~~G~~v  288 (288)
                       ... ..+|.|+-..+..    .++.+.+.|+|+|++|
T Consensus        96 -~~~-~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lv  131 (186)
T d1l3ia_          96 -CKI-PDIDIAVVGGSGGELQEILRIIKDKLKPGGRII  131 (186)
T ss_dssp             -TTS-CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEE
T ss_pred             -ccc-CCcCEEEEeCccccchHHHHHHHHHhCcCCEEE
Confidence             121 2499888654432    2377788999999874

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.07  E-value=0.014  Score=48.79  Aligned_cols=81  Identities=9%  Similarity=0.029  Sum_probs=50.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHH---HHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAK---EKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~---~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +.|||+|++|-+|...+..+...|.+|+++........+..   +....-+...+. -+-.+.+.+.......+ +|+||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~-~Dl~d~~~l~~~~~~~~-~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYE-VDLCDRKGLEKVFKEYK-IDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEE-CCTTCHHHHHHHHHHSC-CCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEE-eecCCHHHHHHHHhccC-CCEEE
Confidence            57999999999999999999999999998753221222222   222233343332 12123345555444444 99999


Q ss_pred             ECCCcc
Q 023007          267 NCVGGN  272 (288)
Q Consensus       267 d~~g~~  272 (288)
                      .+.+..
T Consensus        80 hlAa~~   85 (347)
T d1z45a2          80 HFAGLK   85 (347)
T ss_dssp             ECCSCC
T ss_pred             Eccccc
Confidence            998753

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.031  Score=40.99  Aligned_cols=92  Identities=11%  Similarity=0.152  Sum_probs=63.0

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHH-HHHHhCCCCEEEeCCcccH-----------------
Q 023007          190 DSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEV-----------------  249 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~-----------------  249 (288)
                      ++|.|+|+||.+|..+..+.+..  .++|...+..  .+-+.+ +.+++|.+..++..++...                 
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~--~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~   79 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG--KNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVL   79 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES--SCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec--CcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccc
Confidence            47999999999999999999987  4788888754  344443 5667899988876654322                 


Q ss_pred             ---HHHHHHhcCCCCccEEEECCCccc-HHHHHhhccCC
Q 023007          250 ---KNVKGLLANLPEPALGFNCVGGNS-ASKVLKFLRFR  284 (288)
Q Consensus       250 ---~~i~~~~~~~g~~D~v~d~~g~~~-~~~a~~~l~~~  284 (288)
                         +.+.++.... ++|+|+....+-. +...+..++.+
T Consensus        80 ~g~~~l~~~~~~~-~~D~vi~AI~G~aGL~~t~~aik~g  117 (151)
T d1q0qa2          80 SGQQAACDMAALE-DVDQVMAAIVGAAGLLPTLAAIRAG  117 (151)
T ss_dssp             ESHHHHHHHHTCT-TCCEEEECCSSGGGHHHHHHHHHTT
T ss_pred             cChHHHHHHhcCC-CCCEEEEecCcccHHHHHHHHHhcC
Confidence               1223322222 4899999876644 46666666554

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=95.80  E-value=0.038  Score=44.27  Aligned_cols=80  Identities=20%  Similarity=0.280  Sum_probs=52.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCC--HHHHHHHH---hCCCCEEEeCCcccHHHHHHHhcCCCCccE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGS--DEAKEKLK---GLGADEVFTESQLEVKNVKGLLANLPEPAL  264 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~--~~~~~~~~---~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~  264 (288)
                      ++|||+|++|-+|...+..+...|.+|+++++.....  .++...+.   ..++ .++..+........+...+   .|.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~---~~~   79 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGSIDDHASLVEAVKN---VDV   79 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTC-EEECCCTTCHHHHHHHHHT---CSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCc-EEEEeecccchhhhhhhhh---cee
Confidence            6899999999999999999999999999998754322  22333332   3333 3343333333444444443   888


Q ss_pred             EEECCCccc
Q 023007          265 GFNCVGGNS  273 (288)
Q Consensus       265 v~d~~g~~~  273 (288)
                      ++++.+...
T Consensus        80 vi~~~~~~~   88 (307)
T d1qyca_          80 VISTVGSLQ   88 (307)
T ss_dssp             EEECCCGGG
T ss_pred             eeecccccc
Confidence            888887543

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=95.78  E-value=0.0013  Score=52.35  Aligned_cols=97  Identities=10%  Similarity=0.088  Sum_probs=61.6

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHHH
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKNV  252 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~i  252 (288)
                      .+.+.+.++||++||=+|+  +.|..+..+++. +.+++++.    -++...+.++    ..+.+.+  +..+..   .+
T Consensus         7 ~l~~~~~~~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD----~S~~~l~~A~~~~~~~~~~~~~~~~~d~~---~~   76 (234)
T d1xxla_           7 LMIKTAECRAEHRVLDIGA--GAGHTALAFSPY-VQECIGVD----ATKEMVEVASSFAQEKGVENVRFQQGTAE---SL   76 (234)
T ss_dssp             HHHHHHTCCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEE----SCHHHHHHHHHHHHHHTCCSEEEEECBTT---BC
T ss_pred             HHHHHhCCCCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEe----CChhhhhhhhhhhcccccccccccccccc---cc
Confidence            4556789999999999988  556777777764 78988887    5777766553    3333222  111111   10


Q ss_pred             HHHhcCCCCccEEEECCCc-------ccHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVGG-------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g~-------~~~~~a~~~l~~~G~~v  288 (288)
                       .+.++  .+|+|+.+-.-       ..++.+.+.|+|+|+++
T Consensus        77 -~~~~~--~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~  116 (234)
T d1xxla_          77 -PFPDD--SFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFL  116 (234)
T ss_dssp             -CSCTT--CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred             -ccccc--ccceeeeeceeecccCHHHHHHHHHHeeCCCcEEE
Confidence             01122  59998875442       12377889999999863

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.78  E-value=0.019  Score=46.09  Aligned_cols=90  Identities=13%  Similarity=0.080  Sum_probs=56.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EEEeCCcccHHHHHHHhcCC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQLEVKNVKGLLANL  259 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~i~~~~~~~  259 (288)
                      ..++|++||=.|+ | .|..++.++ ..|++|+++.    .+++..+.++    ..+.. .++...   ...  ....+ 
T Consensus       117 ~~~~g~~VLDiGc-G-sG~l~i~aa-~~g~~V~gvD----is~~av~~A~~na~~n~~~~~~~~~d---~~~--~~~~~-  183 (254)
T d2nxca1         117 HLRPGDKVLDLGT-G-SGVLAIAAE-KLGGKALGVD----IDPMVLPQAEANAKRNGVRPRFLEGS---LEA--ALPFG-  183 (254)
T ss_dssp             HCCTTCEEEEETC-T-TSHHHHHHH-HTTCEEEEEE----SCGGGHHHHHHHHHHTTCCCEEEESC---HHH--HGGGC-
T ss_pred             hcCccCEEEEccc-c-hhHHHHHHH-hcCCEEEEEE----CChHHHHHHHHHHHHcCCceeEEecc---ccc--ccccc-
Confidence            3689999999898 3 356666555 4689998876    4666665554    34543 223221   111  12223 


Q ss_pred             CCccEEEECCCcccH----HHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGGNSA----SKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~~~~----~~a~~~l~~~G~~v  288 (288)
                       ++|+|+.+...+..    ....++|+|||+++
T Consensus       184 -~fD~V~ani~~~~l~~l~~~~~~~LkpGG~li  215 (254)
T d2nxca1         184 -PFDLLVANLYAELHAALAPRYREALVPGGRAL  215 (254)
T ss_dssp             -CEEEEEEECCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             -ccchhhhccccccHHHHHHHHHHhcCCCcEEE
Confidence             59999876554332    56678999999974

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.72  E-value=0.022  Score=48.35  Aligned_cols=32  Identities=9%  Similarity=0.103  Sum_probs=28.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      |.+|||+|++|-+|...+..+...|.+|+++.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            68999999999999999999999999998874

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.68  E-value=0.057  Score=39.85  Aligned_cols=95  Identities=16%  Similarity=0.062  Sum_probs=65.4

Q ss_pred             HHHHHHhhcC-CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHH
Q 023007          176 ALRMLEDFTT-LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKG  254 (288)
Q Consensus       176 a~~~l~~~~~-~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~  254 (288)
                      .+.++.+..+ +-.|++++|.|= |-+|.-.++-++.+|++|+++.    .++-+.-.+.--|+ ++.        .+.+
T Consensus         9 ~~d~i~r~t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E----~DPi~alqA~mdGf-~v~--------~~~~   74 (163)
T d1v8ba1           9 LPDGLMRATDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITE----IDPICAIQAVMEGF-NVV--------TLDE   74 (163)
T ss_dssp             HHHHHHHHHCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SCHHHHHHHHTTTC-EEC--------CHHH
T ss_pred             HHHHHHHHhCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEe----cCchhhHHHHhcCC-ccC--------chhH
Confidence            3444444434 578999999998 9999999999999999999997    35533222222222 222        2333


Q ss_pred             HhcCCCCccEEEECCCcccH--HHHHhhccCCCee
Q 023007          255 LLANLPEPALGFNCVGGNSA--SKVLKFLRFREEQ  287 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~~~~--~~a~~~l~~~G~~  287 (288)
                      ..+   ..|++|-++|+...  ..-++.|+.+..+
T Consensus        75 a~~---~aDi~vTaTGn~~vI~~~h~~~MKdgaIl  106 (163)
T d1v8ba1          75 IVD---KGDFFITCTGNVDVIKLEHLLKMKNNAVV  106 (163)
T ss_dssp             HTT---TCSEEEECCSSSSSBCHHHHTTCCTTCEE
T ss_pred             ccc---cCcEEEEcCCCCccccHHHHHHhhCCeEE
Confidence            333   38999999999764  7778898887543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.012  Score=46.31  Aligned_cols=77  Identities=19%  Similarity=0.312  Sum_probs=46.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +++|||+||+|-+|...++.+...|.  +++++.+.......  +....+  . ....+-...+.+.....+   +|++|
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~--~~~~~i--~-~~~~D~~~~~~~~~~~~~---~d~vi   85 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE--EAYKNV--N-QEVVDFEKLDDYASAFQG---HDVGF   85 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS--GGGGGC--E-EEECCGGGGGGGGGGGSS---CSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc--ccccee--e-eeeecccccccccccccc---ccccc
Confidence            47899999999999999998888785  78888864322111  111111  1 111111112333333333   99999


Q ss_pred             ECCCccc
Q 023007          267 NCVGGNS  273 (288)
Q Consensus       267 d~~g~~~  273 (288)
                      .|.|...
T Consensus        86 ~~~~~~~   92 (232)
T d2bkaa1          86 CCLGTTR   92 (232)
T ss_dssp             ECCCCCH
T ss_pred             ccccccc
Confidence            9998643

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.038  Score=44.97  Aligned_cols=80  Identities=10%  Similarity=0.056  Sum_probs=44.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC---CCCCHHHHHHHHhCC---CCE-EE--eCCc-ccHHHHHHHhcCCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD---RAGSDEAKEKLKGLG---ADE-VF--TESQ-LEVKNVKGLLANLP  260 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~---~~~~~~~~~~~~~~g---~~~-v~--~~~~-~~~~~i~~~~~~~g  260 (288)
                      -|||+|+++++|.+.+..+...|++++.+...   ....++..+.++++.   ... .+  |-.+ ...+.+.+.... |
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-g   82 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE-G   82 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT-S
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc-c
Confidence            35889999999999999888899986554321   111122223344433   222 22  2211 122333332222 3


Q ss_pred             CccEEEECCCc
Q 023007          261 EPALGFNCVGG  271 (288)
Q Consensus       261 ~~D~v~d~~g~  271 (288)
                      .+|+++++.|.
T Consensus        83 ~idilvnnag~   93 (285)
T d1jtva_          83 RVDVLVCNAGL   93 (285)
T ss_dssp             CCSEEEECCCC
T ss_pred             chhhhhhcccc
Confidence            69999999874

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.59  E-value=0.022  Score=47.11  Aligned_cols=82  Identities=10%  Similarity=0.179  Sum_probs=48.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHH----HhCC--CCEEEeCCcccHHHHHHHhcCCCCc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEAKEKL----KGLG--ADEVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~----~~~g--~~~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      +++||+|++|-+|...+..+...|++|+++.+... .+.++.+.+    ....  ...++..+-...+.+....... ++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~-~~   80 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-KP   80 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-CC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh-cc
Confidence            68999999999999999999999999999986321 011121111    1111  1112222222334444433332 39


Q ss_pred             cEEEECCCcc
Q 023007          263 ALGFNCVGGN  272 (288)
Q Consensus       263 D~v~d~~g~~  272 (288)
                      |+|+.+++..
T Consensus        81 D~Vih~Aa~~   90 (339)
T d1n7ha_          81 DEVYNLAAQS   90 (339)
T ss_dssp             SEEEECCSCC
T ss_pred             chhhhccccc
Confidence            9999998753

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.59  E-value=0.02  Score=46.95  Aligned_cols=79  Identities=15%  Similarity=0.271  Sum_probs=47.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC---EEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD---EVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ++|||+|++|-+|...+..+...|++|+++.+...  ....+.++.++.+   .++..+-.+.+.+....... ..++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-QPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCC--cccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-cccccc
Confidence            58999999999999999988888999999986532  2223444444432   12222111223333322221 267777


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      .+...
T Consensus        78 ~~a~~   82 (321)
T d1rpna_          78 NLAAQ   82 (321)
T ss_dssp             ECCSC
T ss_pred             ccccc
Confidence            77654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.56  E-value=0.0064  Score=49.81  Aligned_cols=34  Identities=12%  Similarity=0.067  Sum_probs=30.5

Q ss_pred             CCCeEEEeCCCC--hHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATS--IVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g--~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +|+++||+|++|  ++|.+.++.+...|++|+++.+
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~   42 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTW   42 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            679999999976  8999999999999999998874

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.56  E-value=0.0042  Score=50.72  Aligned_cols=97  Identities=14%  Similarity=0.013  Sum_probs=62.7

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCcccHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~i  252 (288)
                      +.....+++|.+||=+|+  +.|..+..+++..|++|+++.    .++...+.++    ..|..   .++......    
T Consensus        59 l~~~~~l~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD----~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~----  128 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLN----IAPVQNKRNEEYNNQAGLADNITVKYGSFLE----  128 (282)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEE----SCHHHHHHHHHHHHHHTCTTTEEEEECCTTS----
T ss_pred             HHHhcCCCCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEe----ccchhhhhhhccccccccccccccccccccc----
Confidence            445567999999999998  456778888888899999887    5777766554    33432   222221111    


Q ss_pred             HHHhcCCCCccEEEECCC-----c--ccHHHHHhhccCCCeeC
Q 023007          253 KGLLANLPEPALGFNCVG-----G--NSASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~~~~g~~D~v~d~~g-----~--~~~~~a~~~l~~~G~~v  288 (288)
                        +.-..+.+|+|+-.-.     +  ..+..+.++|+|||+++
T Consensus       129 --l~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~  169 (282)
T d2o57a1         129 --IPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMA  169 (282)
T ss_dssp             --CSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred             --ccccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEE
Confidence              1111125999886432     2  12377789999999874

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=95.46  E-value=0.0096  Score=46.93  Aligned_cols=90  Identities=13%  Similarity=0.090  Sum_probs=62.1

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      +.++.+||=.|+  +.|..+..+++ .|++|+++.    .+++..+.+++-+....+......   + .+.++  .+|+|
T Consensus        40 ~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~giD----~s~~~l~~a~~~~~~~~~~~~~~~---l-~~~~~--~fD~i  106 (246)
T d2avna1          40 LKNPCRVLDLGG--GTGKWSLFLQE-RGFEVVLVD----PSKEMLEVAREKGVKNVVEAKAED---L-PFPSG--AFEAV  106 (246)
T ss_dssp             CCSCCEEEEETC--TTCHHHHHHHT-TTCEEEEEE----SCHHHHHHHHHHTCSCEEECCTTS---C-CSCTT--CEEEE
T ss_pred             cCCCCEEEEECC--CCchhcccccc-cceEEEEee----cccccccccccccccccccccccc---c-ccccc--cccce
Confidence            567789988888  47888888876 599999987    689999999876665555443322   1 11122  59998


Q ss_pred             EECCCc--------ccHHHHHhhccCCCeeC
Q 023007          266 FNCVGG--------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       266 ~d~~g~--------~~~~~a~~~l~~~G~~v  288 (288)
                      +.+...        ..+....++|+|||.++
T Consensus       107 i~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~i  137 (246)
T d2avna1         107 LALGDVLSYVENKDKAFSEIRRVLVPDGLLI  137 (246)
T ss_dssp             EECSSHHHHCSCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeecchhhhhhhHHHHHHHHHhhcCcCcEEE
Confidence            865431        11266778999999874

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.46  E-value=0.013  Score=49.30  Aligned_cols=77  Identities=16%  Similarity=0.140  Sum_probs=49.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      ..+-+|||+|++|-+|...+..+...|.+|+++....  .+...   .......+...+-...+.+.....+   +|.|+
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~--~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~---~d~Vi   84 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKK--NEHMT---EDMFCDEFHLVDLRVMENCLKVTEG---VDHVF   84 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--CSSSC---GGGTCSEEEECCTTSHHHHHHHHTT---CSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCC--ccchh---hhcccCcEEEeechhHHHHHHHhhc---CCeEe
Confidence            3466899999999999999999999999999886421  11111   1122223332232334555555543   99999


Q ss_pred             ECCCc
Q 023007          267 NCVGG  271 (288)
Q Consensus       267 d~~g~  271 (288)
                      .+.+.
T Consensus        85 h~a~~   89 (363)
T d2c5aa1          85 NLAAD   89 (363)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            98754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.44  E-value=0.018  Score=46.15  Aligned_cols=42  Identities=21%  Similarity=0.240  Sum_probs=32.5

Q ss_pred             CCCeEEEeCCCChHHHHHHH-HHH--HcCCeEEEEEcCCCCCHHHHHHH
Q 023007          188 SGDSIVQNGATSIVGQCIIQ-IAR--HRGIHSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~-la~--~~g~~vi~~~~~~~~~~~~~~~~  233 (288)
                      .|+.++|+|+++++|.+.++ +|+  ..|++|+++.    +++++.+.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~----r~~~~l~~~   49 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSA----RSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEE----SCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEE----CCHHHHHHH
Confidence            57889999999999998665 455  3689999998    467666544

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.38  E-value=0.071  Score=44.02  Aligned_cols=79  Identities=6%  Similarity=0.088  Sum_probs=49.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC------CEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA------DEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      +++||+|++|-+|...+..+...|.+|+++.+....+.+..+..+.+..      -.++..+..+.........+   .+
T Consensus        17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~---~~   93 (341)
T d1sb8a_          17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG---VD   93 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT---CS
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccc---cc
Confidence            7899999999999999999999999999987433234444444433321      12333333333344443333   67


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      .++.+...
T Consensus        94 ~v~~~~a~  101 (341)
T d1sb8a_          94 YVLHQAAL  101 (341)
T ss_dssp             EEEECCSC
T ss_pred             cccccccc
Confidence            77766543

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.36  E-value=0.069  Score=45.68  Aligned_cols=104  Identities=18%  Similarity=0.173  Sum_probs=64.0

Q ss_pred             HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHh-----------CC----C
Q 023007          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG-----------LG----A  238 (288)
Q Consensus       175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~-----------~g----~  238 (288)
                      ...+.+ +..++++|++++=+|+  ++|..+.++|+..|+ +++++.    .++...+.+++           .|    .
T Consensus       204 ~i~~Il-~~l~Lkpgd~fLDLGC--G~G~~vl~aA~~~g~~~v~GID----iS~~~i~~Ak~~~~e~~~~~~~~g~~~~~  276 (406)
T d1u2za_         204 FLSDVY-QQCQLKKGDTFMDLGS--GVGNCVVQAALECGCALSFGCE----IMDDASDLTILQYEELKKRCKLYGMRLNN  276 (406)
T ss_dssp             HHHHHH-HHTTCCTTCEEEEESC--TTSHHHHHHHHHHCCSEEEEEE----CCHHHHHHHHHHHHHHHHHHHHTTBCCCC
T ss_pred             HHHHHH-HHhCCCCCCEEEeCCC--CCcHHHHHHHHHcCCCeEEEEe----CCHHHHHHHHHHHHHHhhhhhhhcccccc
Confidence            344445 4488999999887777  789999999999987 688887    57777666532           11    1


Q ss_pred             CEEEeCCc-ccHHHHHHHhcCCCCccEEEECCC--cc----cHHHHHhhccCCCeeC
Q 023007          239 DEVFTESQ-LEVKNVKGLLANLPEPALGFNCVG--GN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       239 ~~v~~~~~-~~~~~i~~~~~~~g~~D~v~d~~g--~~----~~~~a~~~l~~~G~~v  288 (288)
                      .......+ ...+.......   .+|+++-...  .+    .+...++.|+|||++|
T Consensus       277 ~~~~~~~~f~~~~~~d~~~~---~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIV  330 (406)
T d1u2za_         277 VEFSLKKSFVDNNRVAELIP---QCDVILVNNFLFDEDLNKKVEKILQTAKVGCKII  330 (406)
T ss_dssp             EEEEESSCSTTCHHHHHHGG---GCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEE
T ss_pred             ceeeeeechhhccccccccc---cceEEEEecccCchHHHHHHHHHHHhcCCCcEEE
Confidence            11111111 11123333323   2777764321  22    2356778999999985

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.25  E-value=0.017  Score=48.61  Aligned_cols=81  Identities=14%  Similarity=0.172  Sum_probs=45.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHHHh----CCCC-EEEeCCcccHHHHHHHhcCCCCcc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA-GSDEAKEKLKG----LGAD-EVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~-~~~~~~~~~~~----~g~~-~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      +.|||+|++|-+|...+..+...|.+|+++.+... .+.++.+.+..    .... .++..+-.+.+.+.+...+. ++|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-QPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-CCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc-CCC
Confidence            67899999999999999999999999998874211 01222222211    1111 11111112344555554443 289


Q ss_pred             EEEECCCc
Q 023007          264 LGFNCVGG  271 (288)
Q Consensus       264 ~v~d~~g~  271 (288)
                      +|+.+.+.
T Consensus        81 ~v~h~aa~   88 (357)
T d1db3a_          81 EVYNLGAM   88 (357)
T ss_dssp             EEEECCCC
T ss_pred             EEEEeecc
Confidence            99999764

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.01  Score=46.74  Aligned_cols=100  Identities=14%  Similarity=0.015  Sum_probs=61.1

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCE------------EEeCCcc-
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADE------------VFTESQL-  247 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~------------v~~~~~~-  247 (288)
                      ....+.++.+||..|+  +.|..+..+|+ .|++|+++.    .+++..+.+++ .+...            ....... 
T Consensus        39 ~~l~~~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD----~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVE----ISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGN  111 (229)
T ss_dssp             HHHTTCCSCEEEETTC--TTCTHHHHHHH-TTCEEEEEC----SCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred             HhcCCCCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEe----CCHHHHHHHHHHhhccccccchhcccccceeeecCCc
Confidence            4456889999999999  44777888876 599999997    68888877653 22211            1111000 


Q ss_pred             --c-HHHHHHHhc-CCCCccEEEECCCc-----c----cHHHHHhhccCCCeeC
Q 023007          248 --E-VKNVKGLLA-NLPEPALGFNCVGG-----N----SASKVLKFLRFREEQW  288 (288)
Q Consensus       248 --~-~~~i~~~~~-~~g~~D~v~d~~g~-----~----~~~~a~~~l~~~G~~v  288 (288)
                        + ...+..+.. ..+.+|+|+++..-     +    ......++|+|+|+++
T Consensus       112 v~~~~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~  165 (229)
T d2bzga1         112 ISLYCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYL  165 (229)
T ss_dssp             EEEEESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred             EEEEEcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEE
Confidence              0 011222221 11248999997532     1    1266789999999863

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.0096  Score=47.00  Aligned_cols=94  Identities=10%  Similarity=0.005  Sum_probs=56.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC---CEEEeCCcccHHHHH-HHhcCCCC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA---DEVFTESQLEVKNVK-GLLANLPE  261 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~i~-~~~~~~g~  261 (288)
                      ..+|.+||=+|+  +.|..+..+++..+.+++++.    .+++..+.+++...   ..+... ......+. .+.++  .
T Consensus        51 ~~~g~~VLdIGc--G~G~~a~~~a~~~~~~v~~id----~s~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~  121 (229)
T d1zx0a1          51 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIE----CNDGVFQRLRDWAPRQTHKVIPL-KGLWEDVAPTLPDG--H  121 (229)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEE----CCHHHHHHHHHHGGGCSSEEEEE-ESCHHHHGGGSCTT--C
T ss_pred             ccCCCeEEEeec--cchHHHHHHHHcCCCeEEEeC----CCHHHHHHHHHHhhhcccccccc-cccccccccccccc--c
Confidence            367889999998  556788888887667887776    57888887764321   111111 11112222 22223  5


Q ss_pred             ccEE-EECCCcc-----------cHHHHHhhccCCCeeC
Q 023007          262 PALG-FNCVGGN-----------SASKVLKFLRFREEQW  288 (288)
Q Consensus       262 ~D~v-~d~~g~~-----------~~~~a~~~l~~~G~~v  288 (288)
                      +|.+ ||.....           .+..+.+.|+|||+|+
T Consensus       122 fD~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~  160 (229)
T d1zx0a1         122 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLT  160 (229)
T ss_dssp             EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred             ccceeecccccccccccccCHHHHHHHHHHHcCCCcEEE
Confidence            8876 4654321           1255678999999874

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.22  E-value=0.056  Score=39.42  Aligned_cols=44  Identities=16%  Similarity=0.291  Sum_probs=31.5

Q ss_pred             eEEEeCCCChHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHH-hCCCC
Q 023007          191 SIVQNGATSIVGQCIIQ-IARHRGIHSINIIRDRAGSDEAKEKLK-GLGAD  239 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~-la~~~g~~vi~~~~~~~~~~~~~~~~~-~~g~~  239 (288)
                      +|.++|+ |.+|.+.++ +.+.-+.+++++.    .++++.+.+. ++|..
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~----r~~~~~~~l~~~~~~~   47 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIAN----RGAEKRERLEKELGVE   47 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEEC----SSHHHHHHHHHHTCCE
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEe----CChhHHHHhhhhcccc
Confidence            4788999 999998777 4444347787776    5777777664 56754

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.20  E-value=0.01  Score=46.41  Aligned_cols=96  Identities=9%  Similarity=0.104  Sum_probs=61.3

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKNVK  253 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~i~  253 (288)
                      +.+.++++++++||=+|+ | .|..+..+++. |++++++.    .+++..+.++    ..+.+.+  +.....   .+ 
T Consensus         7 ll~~~~l~~~~rVLDiGc-G-~G~~~~~l~~~-~~~v~gvD----~s~~~i~~A~~~~~~~~~~~i~~~~~d~~---~l-   75 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVAT-G-GGHVANAFAPF-VKKVVAFD----LTEDILKVARAFIEGNGHQQVEYVQGDAE---QM-   75 (231)
T ss_dssp             HHHHHTCCSCCEEEEETC-T-TCHHHHHHGGG-SSEEEEEE----SCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-
T ss_pred             HHHhcCCCCcCEEEEecc-c-CcHHHHHHHHh-CCEEEEEE----CCHHHHhhhhhcccccccccccccccccc---cc-
Confidence            445688999999999998 3 56666666654 78988886    5777666553    4554432  222111   11 


Q ss_pred             HHhcCCCCccEEEECCC-----c--ccHHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVG-----G--NSASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g-----~--~~~~~a~~~l~~~G~~v  288 (288)
                      .+..+  .+|+|+..-.     +  ..+..+.++|+|||+++
T Consensus        76 ~~~~~--~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~  115 (231)
T d1vl5a_          76 PFTDE--RFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLL  115 (231)
T ss_dssp             CSCTT--CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEE
T ss_pred             ccccc--ccccccccccccccCCHHHHHHHHHHhcCCCcEEE
Confidence            11222  5999987543     2  22377889999999874

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.13  E-value=0.039  Score=38.18  Aligned_cols=36  Identities=17%  Similarity=0.275  Sum_probs=30.7

Q ss_pred             CCCC-CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          186 LNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       186 ~~~g-~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +.++ .+|.|+|+ |.+|...++.|+.+|+++++...+
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~   43 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRY   43 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCC
Confidence            3444 46999999 999999999999999999998743

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.12  E-value=0.037  Score=45.39  Aligned_cols=32  Identities=16%  Similarity=0.208  Sum_probs=29.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ++|||+|++|-+|...+..+...|.+|+++..
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            68999999999999999998889999999864

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.93  E-value=0.066  Score=39.60  Aligned_cols=48  Identities=21%  Similarity=0.244  Sum_probs=38.2

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHhCCC-CEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKGLGA-DEVF  242 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~~g~-~~v~  242 (288)
                      ++|+|+|. |.+|...+..++..|.  +++++.    .+++..+.+++.+. +...
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D----~~~~~~~~a~~~~~~~~~~   52 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYD----INPESISKAVDLGIIDEGT   52 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEEC----SCHHHHHHHHHTTSCSEEE
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEE----CChHHHHHHHHhhcchhhh
Confidence            46999999 9999999988888885  666665    58888888888875 4443

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.71  E-value=0.027  Score=45.01  Aligned_cols=31  Identities=19%  Similarity=0.254  Sum_probs=28.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +|||+|++|-+|...+..++..|.+|+++.+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r   33 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDV   33 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeec
Confidence            4899999999999999999999999988863

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.65  E-value=0.033  Score=42.80  Aligned_cols=32  Identities=22%  Similarity=0.256  Sum_probs=30.0

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .|++|.|+|. |.+|...+++++.+|++|++..
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d   73 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYD   73 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEEC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcccccccC
Confidence            4789999999 9999999999999999999885

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.61  E-value=0.038  Score=42.46  Aligned_cols=31  Identities=16%  Similarity=0.260  Sum_probs=26.6

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCC--eEEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGI--HSINII  220 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~  220 (288)
                      ++|||+||+|-+|...+..+...|.  +|+...
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~   35 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA   35 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEe
Confidence            7999999999999999998888886  555555

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.031  Score=46.51  Aligned_cols=98  Identities=11%  Similarity=0.092  Sum_probs=59.9

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEEcCCCCCHHHHHHHHh----CC-----------CCEE-
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI--HSINIIRDRAGSDEAKEKLKG----LG-----------ADEV-  241 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~~~~~~~~~~~~~~~~----~g-----------~~~v-  241 (288)
                      +....+++||++||=.|+  +.|.+++.+|+..|.  +|+.+.    .+++..+.+++    ++           .+.+ 
T Consensus        90 Il~~l~i~pG~rVLE~Gt--GsG~lt~~LAr~vg~~G~V~t~E----~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~  163 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGS--GSGGMSLFLSKAVGSQGRVISFE----VRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD  163 (324)
T ss_dssp             HHHHHTCCTTCEEEEECC--TTSHHHHHHHHHHCTTCEEEEEE----SSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred             HHHHhCCCCCCEEEEecc--cccHHHHHHHHHhCCCcEEEEec----CCHHHHHHHHHHHHHhhhhhhhhhhhcccccee
Confidence            334588999999987777  558889999998875  788887    57777766542    11           1111 


Q ss_pred             -EeCCc-ccHHHHHHHhcCCCCccEEEECCCcc--cHHHHHhhccCCCeeC
Q 023007          242 -FTESQ-LEVKNVKGLLANLPEPALGFNCVGGN--SASKVLKFLRFREEQW  288 (288)
Q Consensus       242 -~~~~~-~~~~~i~~~~~~~g~~D~v~d~~g~~--~~~~a~~~l~~~G~~v  288 (288)
                       .+.+- .....+   ..+  .+|.||=-...+  .+..+.+.|+|||+++
T Consensus       164 ~~~~di~~~~~~~---~~~--~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv  209 (324)
T d2b25a1         164 FIHKDISGATEDI---KSL--TFDAVALDMLNPHVTLPVFYPHLKHGGVCA  209 (324)
T ss_dssp             EEESCTTCCC------------EEEEEECSSSTTTTHHHHGGGEEEEEEEE
T ss_pred             EEecchhhccccc---CCC--CcceEeecCcCHHHHHHHHHHhccCCCEEE
Confidence             11111 000111   111  388776444443  3489999999999975

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.099  Score=43.16  Aligned_cols=82  Identities=12%  Similarity=0.120  Sum_probs=49.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC------CCCCHHHHHHHHhCCC--CEEEeCCcccHHHHHHHhcCCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD------RAGSDEAKEKLKGLGA--DEVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~------~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      ++|||+|++|-+|...+..+...|.+|+++...      .....+.....+.+..  -.++..+-.+.+.+.+...+. .
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~   81 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-S   81 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-C
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc-c
Confidence            689999999999999999999999999987521      1112233333322211  123332223344555544443 3


Q ss_pred             ccEEEECCCcc
Q 023007          262 PALGFNCVGGN  272 (288)
Q Consensus       262 ~D~v~d~~g~~  272 (288)
                      +|+++.+++..
T Consensus        82 ~~~i~h~Aa~~   92 (346)
T d1ek6a_          82 FMAVIHFAGLK   92 (346)
T ss_dssp             EEEEEECCSCC
T ss_pred             ccccccccccc
Confidence            88888887743

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=94.46  E-value=0.048  Score=45.76  Aligned_cols=79  Identities=9%  Similarity=0.190  Sum_probs=45.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC-CC--EEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-AD--EVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-~~--~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +|||+|++|-+|...+..+...|.++++.++..... ...+.++.+. ..  ..+..+-.+...+..+..+. ++|+||.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~d~Vih   79 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYA-GNLESLSDISESNRYNFEHADICDSAEITRIFEQY-QPDAVMH   79 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTT-CCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc-ccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-CCCEEEE
Confidence            599999999999999999988899877766542111 1111222221 11  11111111223444433322 3999999


Q ss_pred             CCCc
Q 023007          268 CVGG  271 (288)
Q Consensus       268 ~~g~  271 (288)
                      |++.
T Consensus        80 lAa~   83 (361)
T d1kewa_          80 LAAE   83 (361)
T ss_dssp             CCSC
T ss_pred             Cccc
Confidence            9864

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.44  E-value=0.096  Score=35.07  Aligned_cols=74  Identities=11%  Similarity=0.030  Sum_probs=51.2

Q ss_pred             CCCCCCeEEEeCCCChHHHHH-HHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          185 TLNSGDSIVQNGATSIVGQCI-IQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a-~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      .++..+++.++|- |++|+.+ +++++..|++|......   .....+.+.+.|..-...+....   +    .   +.|
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~---~~~~~~~L~~~Gi~v~~g~~~~~---i----~---~~d   69 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIA---DGVVTQRLAQAGAKIYIGHAEEH---I----E---GAS   69 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESC---CSHHHHHHHHTTCEEEESCCGGG---G----T---TCS
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCC---CChhhhHHHHCCCeEEECCcccc---C----C---CCC
Confidence            4566789999999 9999877 89999999999999753   23444566678875433333321   1    1   388


Q ss_pred             EEEECCCcc
Q 023007          264 LGFNCVGGN  272 (288)
Q Consensus       264 ~v~d~~g~~  272 (288)
                      +|+-..+-+
T Consensus        70 ~vV~S~AI~   78 (96)
T d1p3da1          70 VVVVSSAIK   78 (96)
T ss_dssp             EEEECTTSC
T ss_pred             EEEECCCcC
Confidence            888776643

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.43  E-value=0.23  Score=36.93  Aligned_cols=90  Identities=13%  Similarity=0.172  Sum_probs=56.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH--H--------HHHHHhcCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV--K--------NVKGLLANL  259 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~--------~i~~~~~~~  259 (288)
                      +|.|.|- |-+|...++.+... ..+++.+.+.  .......++...+.+......+...  .        .+..+..  
T Consensus         4 rIaINGf-GRIGR~v~Ral~~~~dieiVaINd~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   78 (172)
T d2czca2           4 KVGVNGY-GTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE--   78 (172)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT--
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCceEEEEecC--CChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhc--
Confidence            6899998 99999888877654 4688888765  3445556677777654432222110  0        1222222  


Q ss_pred             CCccEEEECCCcccH-HHHHhhccCCCe
Q 023007          260 PEPALGFNCVGGNSA-SKVLKFLRFREE  286 (288)
Q Consensus       260 g~~D~v~d~~g~~~~-~~a~~~l~~~G~  286 (288)
                       ++|+|+||+|.-.. +.+-..+..|-+
T Consensus        79 -~vDvViEcTG~f~~~~~~~~hl~~G~k  105 (172)
T d2czca2          79 -KVDIIVDATPGGIGAKNKPLYEKAGVK  105 (172)
T ss_dssp             -TCSEEEECCSTTHHHHHHHHHHHHTCE
T ss_pred             -cCCEEEECCCCCCCHHHHHHHHHcCCC
Confidence             39999999998665 566566655533

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.38  E-value=0.071  Score=42.26  Aligned_cols=40  Identities=15%  Similarity=0.127  Sum_probs=34.1

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ....--.|++|+|.|- |.+|..+++++...|++++++.+.
T Consensus        24 ~~~~~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          24 KLWGGIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             HHHSCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             HcCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence            3334457899999999 999999999999999999988853

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.22  E-value=0.03  Score=39.87  Aligned_cols=75  Identities=16%  Similarity=0.086  Sum_probs=47.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-HHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-VKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|.|.|++|-+|+...+++...|.+++...+..  +.+..     -.+|-++|..... .....++.... +..+|+=++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~--~~~~~-----~~~DVvIDFS~p~~~~~~l~~~~~~-~~p~ViGTT   73 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVN--GVEEL-----DSPDVVIDFSSPEALPKTVDLCKKY-RAGLVLGTT   73 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETT--EEEEC-----SCCSEEEECSCGGGHHHHHHHHHHH-TCEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCC--cHHHh-----ccCCEEEEecCHHHHHHHHHHHHhc-CCCEEEEcC
Confidence            589999999999999999999999988777431  11111     2367777764432 22222222222 377888888


Q ss_pred             Cccc
Q 023007          270 GGNS  273 (288)
Q Consensus       270 g~~~  273 (288)
                      |-..
T Consensus        74 G~~~   77 (128)
T d1vm6a3          74 ALKE   77 (128)
T ss_dssp             SCCH
T ss_pred             CCCH
Confidence            7433

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.08  E-value=0.42  Score=39.29  Aligned_cols=99  Identities=16%  Similarity=0.143  Sum_probs=59.9

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHh-----------CC--CC--EEEe
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKG-----------LG--AD--EVFT  243 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~-----------~g--~~--~v~~  243 (288)
                      +.+..+++++++|+=+|+  +.|..+.++|+..++ +++++.    .+++..+.+++           .|  ..  .++.
T Consensus       143 ~~~~~~l~~~~~vlD~Gc--G~G~~~~~~a~~~~~~~~~Gid----~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~  216 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGS--GVGQVVLQVAAATNCKHHYGVE----KADIPAKYAETMDREFRKWMKWYGKKHAEYTLER  216 (328)
T ss_dssp             HHHHSCCCTTCEEEEETC--TTSHHHHHHHHHCCCSEEEEEE----CSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEE
T ss_pred             HHHHcCCCCCCEEEEcCC--CCCHHHHHHHHHhCCCeEEEEe----CCHHHHHHHHHHHHHHHHHhhhccccCCceEEEE
Confidence            335588999999998887  678888999999887 577776    57776655532           12  11  2222


Q ss_pred             CCcccHHHHHHHhcCCCCccEEEECCC--ccc----HHHHHhhccCCCeeC
Q 023007          244 ESQLEVKNVKGLLANLPEPALGFNCVG--GNS----ASKVLKFLRFREEQW  288 (288)
Q Consensus       244 ~~~~~~~~i~~~~~~~g~~D~v~d~~g--~~~----~~~a~~~l~~~G~~v  288 (288)
                      .+..... ..+...   ..|+|+-..-  .+.    +...++.|+|||++|
T Consensus       217 gd~~~~~-~~~~~~---~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv  263 (328)
T d1nw3a_         217 GDFLSEE-WRERIA---NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIV  263 (328)
T ss_dssp             CCTTSHH-HHHHHH---HCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEE
T ss_pred             Ccccccc-cccccC---cceEEEEcceecchHHHHHHHHHHHhCCCCcEEE
Confidence            2222111 122111   1677774322  222    255678899999985

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.07  E-value=0.19  Score=37.40  Aligned_cols=90  Identities=14%  Similarity=0.206  Sum_probs=55.9

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccH--H--------HHHHHhcCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEV--K--------NVKGLLANL  259 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~--------~i~~~~~~~  259 (288)
                      +|.|.|- |-+|....+.+...+ .+++.+.+..  ......++...+.+......+...  +        ....+..  
T Consensus         3 ~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~--   77 (171)
T d1cf2o1           3 AVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTR--PDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLD--   77 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESS--CSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHH--
T ss_pred             EEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCC--cHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhc--
Confidence            6889987 999999998876654 6788877652  344455666677665433222110  0        1222223  


Q ss_pred             CCccEEEECCCcccH-HHHHhhccCCCe
Q 023007          260 PEPALGFNCVGGNSA-SKVLKFLRFREE  286 (288)
Q Consensus       260 g~~D~v~d~~g~~~~-~~a~~~l~~~G~  286 (288)
                       ++|+|+||+|.-.. ..+-..+..|-+
T Consensus        78 -~vDvViEcTG~f~~~~~~~~hl~~G~K  104 (171)
T d1cf2o1          78 -EADIVIDCTPEGIGAKNLKMYKEKGIK  104 (171)
T ss_dssp             -TCSEEEECCSTTHHHHHHHHHHHTTCE
T ss_pred             -CCCEEEEccCCCCCHHHHHHHHHcCCC
Confidence             39999999998655 555556655433

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=94.07  E-value=0.85  Score=36.45  Aligned_cols=58  Identities=19%  Similarity=0.387  Sum_probs=46.0

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~  243 (288)
                      +.+.++.+|+ ...+|..|++++..++.+|.+.++++... .++.+.+.++.+|++-++.
T Consensus        55 g~~~~~~~vv-~aSsGN~g~a~A~~a~~~G~~~~i~~p~~-~~~~k~~~~~~~GA~v~~v  112 (292)
T d2bhsa1          55 GEIKPGDVLI-EATSGNTGIALAMIAALKGYRMKLLMPDN-MSQERRAAMRAYGAELILV  112 (292)
T ss_dssp             TSCCTTSEEE-EECCSHHHHHHHHHHHHHTCEEEEEEESC-CCHHHHHHHHHTTCEEEEE
T ss_pred             CCcCCCceee-eecccchhHHHHHHHHhcCcceEeeeccC-chhhhhHHHHHhCCCccee
Confidence            5556666555 45559999999999999999998888665 4888899999999975543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.99  E-value=0.22  Score=35.94  Aligned_cols=82  Identities=17%  Similarity=0.085  Sum_probs=52.1

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      -+.++|.|. |.+|...++.+...|.+++++..++....+..+.....|.. ++..+..+.+.+++..-.  +.|.++-+
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d~~~L~~a~i~--~a~~vi~~   78 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGID--RCRAILAL   78 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTT--TCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE-EEEccCcchHHHHHhccc--cCCEEEEc
Confidence            357999999 99999999999999999998874211011122333334443 444444444455554333  48899988


Q ss_pred             CCcccH
Q 023007          269 VGGNSA  274 (288)
Q Consensus       269 ~g~~~~  274 (288)
                      ++++..
T Consensus        79 ~~~d~~   84 (153)
T d1id1a_          79 SDNDAD   84 (153)
T ss_dssp             SSCHHH
T ss_pred             cccHHH
Confidence            887554

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=93.94  E-value=0.11  Score=40.88  Aligned_cols=32  Identities=19%  Similarity=0.255  Sum_probs=28.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +-|+|+|+++++|.+.++.+...|++|+++.+
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~   33 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDI   33 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            35799999999999999999999999998874

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=93.87  E-value=0.073  Score=41.75  Aligned_cols=102  Identities=12%  Similarity=0.077  Sum_probs=62.1

Q ss_pred             HhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcc-cHHHHH
Q 023007          181 EDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQL-EVKNVK  253 (288)
Q Consensus       181 ~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~-~~~~i~  253 (288)
                      ....+....++||=+|.  .+|..++.+|+.+  +.+++.+.    .+++..+.+    ++.|.+.-+..... ..+.+.
T Consensus        52 ~~L~~~~~~k~iLEiGT--~~GyStl~la~al~~~g~v~tie----~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~  125 (227)
T d1susa1          52 SMLLKLINAKNTMEIGV--YTGYSLLATALAIPEDGKILAMD----INKENYELGLPVIKKAGVDHKIDFREGPALPVLD  125 (227)
T ss_dssp             HHHHHHHTCCEEEEECC--GGGHHHHHHHHHSCTTCEEEEEE----SCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred             HHHHHhcCCCcEEEecc--hhhhhHHHHHhhCCCCcEEEEEe----ccchhHHHHHHHHHHhccccceeeeehHHHHHHH
Confidence            33344555689999987  7788888888876  46787777    355555444    56776532222222 123344


Q ss_pred             HHhc---CCCCccEEE-ECCCcc---cHHHHHhhccCCCeeC
Q 023007          254 GLLA---NLPEPALGF-NCVGGN---SASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~---~~g~~D~v~-d~~g~~---~~~~a~~~l~~~G~~v  288 (288)
                      ++..   ..+.||.|| |+--..   .++.++++|++||.++
T Consensus       126 ~l~~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii  167 (227)
T d1susa1         126 EMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIG  167 (227)
T ss_dssp             HHHHCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEE
T ss_pred             HHHhccccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEE
Confidence            4321   123599765 554432   2388999999999874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.83  E-value=0.04  Score=43.20  Aligned_cols=34  Identities=18%  Similarity=0.210  Sum_probs=30.4

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+++||+|+++++|.+.++.+...|++|+++.+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~   34 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLR   34 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            3789999999999999999999999999998853

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.81  E-value=0.098  Score=41.03  Aligned_cols=48  Identities=17%  Similarity=0.136  Sum_probs=38.2

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGAD  239 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~  239 (288)
                      -.|++|+|.|- |.+|..+++++...|++++++.    .+..+.+.+ ...|..
T Consensus        37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d----~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTD----VNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeec----ccHHHHHHHHHhcCCc
Confidence            46899999999 9999999999999999999876    356665544 345543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.79  E-value=0.061  Score=40.15  Aligned_cols=39  Identities=15%  Similarity=0.089  Sum_probs=32.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~  233 (288)
                      +|.|+|++|.+|.+.++.+...|++|++..    +++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~----R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGS----RREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEE----SSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHH
Confidence            578887779999999999999999999998    466665544

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.70  E-value=0.18  Score=37.31  Aligned_cols=53  Identities=21%  Similarity=0.165  Sum_probs=40.9

Q ss_pred             ccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          168 TIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       168 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .+|+.....+..+..+.---.|++|+|.|-+..+|.-...++...|++|+.+-
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h   68 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTH   68 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEEC
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccc
Confidence            44544444455555555566899999999999999999999999999997764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.56  E-value=0.17  Score=36.67  Aligned_cols=80  Identities=18%  Similarity=0.119  Sum_probs=54.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH-HhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL-KGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|.++|+ |.+|.+.+.-....|.++++..    .+.++.+.+ +++|.....+     .+.+.+      +.|+||=|+
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~----r~~~~~~~l~~~~g~~~~~~-----~~~~~~------~~dvIilav   65 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISG----SSLERSKEIAEQLALPYAMS-----HQDLID------QVDLVILGI   65 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEEC----SSHHHHHHHHHHHTCCBCSS-----HHHHHH------TCSEEEECS
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEc----ChHHhHHhhccccceeeech-----hhhhhh------ccceeeeec
Confidence            4788999 9999998887777788998887    466666554 5667542211     122222      388888888


Q ss_pred             CcccHHHHHhhccCCCe
Q 023007          270 GGNSASKVLKFLRFREE  286 (288)
Q Consensus       270 g~~~~~~a~~~l~~~G~  286 (288)
                      ........++.++++-.
T Consensus        66 kp~~~~~vl~~l~~~~~   82 (152)
T d2ahra2          66 KPQLFETVLKPLHFKQP   82 (152)
T ss_dssp             CGGGHHHHHTTSCCCSC
T ss_pred             chHhHHHHhhhccccee
Confidence            76666777777766543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.019  Score=47.47  Aligned_cols=39  Identities=10%  Similarity=0.194  Sum_probs=27.4

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEE
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINII  220 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~  220 (288)
                      ++.+.....+|++||-+|+ | .|.+++.+|++ |+ +|+++.
T Consensus        26 ai~~~~~~~~~~~VLDiGc-G-~G~lsl~aa~~-Ga~~V~aid   65 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGC-G-TGILSMFAAKA-GAKKVLGVD   65 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETC-T-TSHHHHHHHHT-TCSEEEEEE
T ss_pred             HHHhccccCCcCEEEEECC-C-CCHHHHHHHHc-CCCEEEEEe
Confidence            4555456778999999998 3 56666666664 76 677665

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.47  E-value=0.12  Score=40.67  Aligned_cols=34  Identities=12%  Similarity=0.191  Sum_probs=30.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA  224 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~  224 (288)
                      .+|+|.|+ |++|..++..+.+.|...+.++|.+.
T Consensus        31 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          31 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            79999999 99999999999999998888887654

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.38  E-value=0.12  Score=40.55  Aligned_cols=95  Identities=12%  Similarity=0.007  Sum_probs=59.9

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCCC-EEEeCCcccHHHHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGAD-EVFTESQLEVKNVKG  254 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~i~~  254 (288)
                      +.......++++||=.|+ | .|..+..+++ .|++++++.    .+++..+.+++    .+.. .++..+.      ..
T Consensus        33 ~~~~~~~~~~~~iLDiGc-G-tG~~~~~l~~-~~~~v~gvD----~s~~mi~~a~~~~~~~~~~i~~~~~d~------~~   99 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLAC-G-TGIPTLELAE-RGYEVVGLD----LHEEMLRVARRKAKERNLKIEFLQGDV------LE   99 (251)
T ss_dssp             HHHHTCSSCCCEEEEETC-T-TCHHHHHHHH-TTCEEEEEE----SCHHHHHHHHHHHHHTTCCCEEEESCG------GG
T ss_pred             HHHHhcCCCCCEEEEeCC-C-CCccchhhcc-cceEEEEEe----eccccccccccccccccccchheehhh------hh
Confidence            334456677789999998 3 3777777776 589998886    58888877653    3322 2232221      11


Q ss_pred             HhcCCCCccEEEECCCc----------ccHHHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGG----------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~----------~~~~~a~~~l~~~G~~v  288 (288)
                      +.-. +++|+|+...+.          ..++.+.++|+|||+++
T Consensus       100 l~~~-~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~li  142 (251)
T d1wzna1         100 IAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFI  142 (251)
T ss_dssp             CCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             cccc-cccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEE
Confidence            2112 149998875432          12367789999999874

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.37  E-value=0.076  Score=40.53  Aligned_cols=34  Identities=21%  Similarity=0.205  Sum_probs=31.1

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      -.|++|.|+|. |.+|...++.++.+|++|+....
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~   80 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDP   80 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECT
T ss_pred             eeCceEEEecc-ccccccceeeeeccccceeeccC
Confidence            35789999999 99999999999999999999864

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.36  E-value=0.008  Score=44.57  Aligned_cols=80  Identities=15%  Similarity=0.067  Sum_probs=47.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC--EEEeCCc-ccHHHHHHHhcCCCCccEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQ-LEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~--~v~~~~~-~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +|+|+|+ |.+|.+.+..+...|.+|..+.+...    +.+.....+.+  ....... ...+.+    .   .+|++|-
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~D~iii   69 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ----PYCSVNLVETDGSIFNESLTANDPDFL----A---TSDLLLV   69 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC----SEEEEEEECTTSCEEEEEEEESCHHHH----H---TCSEEEE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH----HhhhhccccCCccccccccccchhhhh----c---ccceEEE
Confidence            5899999 99999988888888999999986432    21111111111  1100000 011111    1   3999999


Q ss_pred             CCCcccHHHHHhhcc
Q 023007          268 CVGGNSASKVLKFLR  282 (288)
Q Consensus       268 ~~g~~~~~~a~~~l~  282 (288)
                      |+....+..+++.++
T Consensus        70 ~vka~~~~~~~~~l~   84 (167)
T d1ks9a2          70 TLKAWQVSDAVKSLA   84 (167)
T ss_dssp             CSCGGGHHHHHHHHH
T ss_pred             eecccchHHHHHhhc
Confidence            999877765555443

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.32  E-value=1.1  Score=37.10  Aligned_cols=59  Identities=29%  Similarity=0.387  Sum_probs=47.2

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~  242 (288)
                      +.+.++++++|+. ..+|..|.+.+..|+.+|.+.++++... .++++.+.++.+|++-+.
T Consensus        90 ~~g~~~~~~~vv~-aSsGN~g~a~A~~a~~~Gi~~~iv~p~~-~~~~k~~~i~~~GA~vv~  148 (355)
T d1jbqa_          90 RDGTLKPGDTIIE-PTSGNTGIGLALAAAVRGYRCIIVMPEK-MSSEKVDVLRALGAEIVR  148 (355)
T ss_dssp             HHTCSCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEECSC-CCHHHHHHHHHTTCEEEE
T ss_pred             HcCCcccCceEEE-ecccchhhHHHHHHHhccCCeEEEeecc-chHHHHHHHHhcCCeEEE
Confidence            3356677666555 4559999999999999999998888655 588999999999998654

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.31  E-value=0.2  Score=37.46  Aligned_cols=82  Identities=7%  Similarity=-0.059  Sum_probs=54.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHH-HHHhCCCC---EEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKE-KLKGLGAD---EVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~-~~~~~g~~---~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      ++.|+|+ |.+|...++..+.. +++++++++.   ++++.+ ..++++..   .+++    +.+.+.+   .. ++|+|
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~---~~~~~~~~~~~~~~~~~~~~~~----~~~~ll~---~~-~iD~v   70 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASR---SLEKAKAFATANNYPESTKIHG----SYESLLE---DP-EIDAL   70 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECS---SHHHHHHHHHHTTCCTTCEEES----SHHHHHH---CT-TCCEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeC---CccccccchhccccccceeecC----cHHHhhh---cc-cccee
Confidence            5789998 89998888877766 6788888753   555544 44566642   2222    1233322   22 49999


Q ss_pred             EECCCccc-HHHHHhhccCC
Q 023007          266 FNCVGGNS-ASKVLKFLRFR  284 (288)
Q Consensus       266 ~d~~g~~~-~~~a~~~l~~~  284 (288)
                      +-|+.... ++.+..+++.|
T Consensus        71 ~I~tp~~~h~~~~~~~l~~g   90 (184)
T d1ydwa1          71 YVPLPTSLHVEWAIKAAEKG   90 (184)
T ss_dssp             EECCCGGGHHHHHHHHHTTT
T ss_pred             eecccchhhcchhhhhhhcc
Confidence            99988755 48888888765

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.22  E-value=0.074  Score=40.25  Aligned_cols=34  Identities=18%  Similarity=0.106  Sum_probs=30.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      -.|+++.|.|. |.+|...++.++.+|.+|+....
T Consensus        42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~   75 (184)
T d1ygya1          42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDP   75 (184)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECT
T ss_pred             ccceeeeeccc-cchhHHHHHHhhhccceEEeecC
Confidence            35789999999 99999999999999999998863

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.18  E-value=0.087  Score=43.61  Aligned_cols=33  Identities=24%  Similarity=0.117  Sum_probs=27.9

Q ss_pred             CCeEEEeCC--CChHHHHHHHHHHHcCCeEEEEEc
Q 023007          189 GDSIVQNGA--TSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       189 g~~vlI~g~--~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ++-.||+|+  +.++|.+.++.+...|++|+++..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~   36 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIW   36 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeC
Confidence            466799994  469999999999999999998863

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.06  E-value=0.12  Score=40.43  Aligned_cols=96  Identities=14%  Similarity=0.066  Sum_probs=60.2

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcC--CeEEEEEcCCCCCHHHHHHHHh----CCCCEEEeCCcccHHHHHHHhc
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRG--IHSINIIRDRAGSDEAKEKLKG----LGADEVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g--~~vi~~~~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~i~~~~~  257 (288)
                      ..++||++||=.|+  +.|..+..+++..|  .+|+++.    .+++..+.+++    .+....+..+....+...   .
T Consensus        69 l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD----~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~---~  139 (227)
T d1g8aa_          69 FPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIE----FSPRVLRELVPIVEERRNIVPILGDATKPEEYR---A  139 (227)
T ss_dssp             CCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEE----SCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGT---T
T ss_pred             cccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEe----CcHHHHHHHHHHHHhcCCceEEEEECCCccccc---c
Confidence            56899999998888  56788888998876  4788887    57777776643    232222222221111111   1


Q ss_pred             CCCCccEEEECCCcc-----cHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGGN-----SASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~~-----~~~~a~~~l~~~G~~v  288 (288)
                      ....+|+++......     .+..+.+.|+++|+++
T Consensus       140 ~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lv  175 (227)
T d1g8aa_         140 LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGM  175 (227)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEE
T ss_pred             cccceEEEEEEccccchHHHHHHHHHHhcccCCeEE
Confidence            112488887654321     2377788999999874

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=93.06  E-value=0.095  Score=43.16  Aligned_cols=30  Identities=7%  Similarity=0.159  Sum_probs=25.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcC-CeEEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRG-IHSINII  220 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~  220 (288)
                      +|||+|++|-+|...++.+...| .+|+++.
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld   32 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLD   32 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            59999999999999988877777 5788775

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.03  E-value=0.089  Score=39.66  Aligned_cols=33  Identities=18%  Similarity=0.265  Sum_probs=30.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++|.|+|. |.+|...+++++.+|++|++...
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~   73 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSR   73 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECS
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccc
Confidence            5789999999 99999999999999999999864

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.96  E-value=0.052  Score=41.31  Aligned_cols=84  Identities=6%  Similarity=-0.010  Sum_probs=53.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC------CEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA------DEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      .+|.|+|+ |..|.+.+.++...|.+|....    .+++..+.+.+-+.      +..+..+-.....+.+...+   .|
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~----r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~---ad   79 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWH----MNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNG---AE   79 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEEC----SCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTT---CS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEE----ecHHHHHHHhhcccccccccccccccccccchhhhhccCC---CC
Confidence            46999999 9999999999988888999988    56777776653221      11111110001123333333   88


Q ss_pred             EEEECCCcccHHHHHhhc
Q 023007          264 LGFNCVGGNSASKVLKFL  281 (288)
Q Consensus       264 ~v~d~~g~~~~~~a~~~l  281 (288)
                      ++|-++....+...++.+
T Consensus        80 ~iiiavPs~~~~~~~~~~   97 (189)
T d1n1ea2          80 IILFVIPTQFLRGFFEKS   97 (189)
T ss_dssp             CEEECSCHHHHHHHHHHH
T ss_pred             EEEEcCcHHHHHHHHHHH
Confidence            999999877765555444

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=92.92  E-value=0.57  Score=33.50  Aligned_cols=80  Identities=20%  Similarity=0.153  Sum_probs=51.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc--HHHHHHHhcCCCCccEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE--VKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~i~~~~~~~g~~D~v~d  267 (288)
                      ++|.|+|+.|.+|...+..++..|++|.+..+.    .+........+.+.++......  .+.+.+......+=.+++|
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~----~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD   85 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDRE----DWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLAD   85 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT----CGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEE
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccc----cccccchhhhhccccccccchhhheeeeecccccccCCceEEE
Confidence            689999966999999999999999999999743    2333333345666666554322  1233333322111248889


Q ss_pred             CCCccc
Q 023007          268 CVGGNS  273 (288)
Q Consensus       268 ~~g~~~  273 (288)
                      +++.+.
T Consensus        86 ~~Svk~   91 (152)
T d2pv7a2          86 LTSVKR   91 (152)
T ss_dssp             CCSCCH
T ss_pred             ecccCH
Confidence            887654

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.72  E-value=0.026  Score=43.66  Aligned_cols=91  Identities=9%  Similarity=0.035  Sum_probs=56.6

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EEEeCCcccHHHHHHHhcCC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQLEVKNVKGLLANL  259 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~i~~~~~~~  259 (288)
                      .++++.+||=+|+  +.|..+..+++. |.+++++.    .+++..+.++    ..+.. ..+.....   .+ .+.++ 
T Consensus        34 ~l~~~~~ILDiGc--G~G~~~~~la~~-~~~v~giD----~S~~~i~~ak~~~~~~~~~~~~~~~d~~---~l-~~~~~-  101 (226)
T d1ve3a1          34 YMKKRGKVLDLAC--GVGGFSFLLEDY-GFEVVGVD----ISEDMIRKAREYAKSRESNVEFIVGDAR---KL-SFEDK-  101 (226)
T ss_dssp             SCCSCCEEEEETC--TTSHHHHHHHHT-TCEEEEEE----SCHHHHHHHHHHHHHTTCCCEEEECCTT---SC-CSCTT-
T ss_pred             hcCCCCEEEEECC--CcchhhhhHhhh-hccccccc----ccccchhhhhhhhccccccccccccccc---cc-cccCc-
Confidence            3678899999998  447777777764 88998887    5788777664    33322 22222111   11 01112 


Q ss_pred             CCccEEEECCCcc-----c----HHHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVGGN-----S----ASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g~~-----~----~~~a~~~l~~~G~~v  288 (288)
                       .+|+|+-...-.     .    +..+.++|+|||+++
T Consensus       102 -~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li  138 (226)
T d1ve3a1         102 -TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFI  138 (226)
T ss_dssp             -CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             -CceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEE
Confidence             499988654321     1    356788999999874

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.69  E-value=0.27  Score=36.43  Aligned_cols=55  Identities=16%  Similarity=0.183  Sum_probs=43.3

Q ss_pred             cccccchHHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          167 ATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       167 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +.+|+.....+..+....---.|++|+|.|.+..+|.-.+.++...|++|+.+-.
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~   71 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS   71 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEec
Confidence            4455555555556666555568999999999999999999999999999998864

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.63  E-value=0.22  Score=41.05  Aligned_cols=95  Identities=18%  Similarity=0.074  Sum_probs=54.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCcccHHHHHHHh
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNVKGLL  256 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~i~~~~  256 (288)
                      .+++|++||=.++  +.|..++.+++. |+ +|+.+.    .+++..+.++    ..|..   +++..+.  .+.+..+.
T Consensus       142 ~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD----~s~~al~~a~~N~~~ngl~~~~~~~~~d~--~~~~~~~~  212 (324)
T d2as0a2         142 WVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGID----KSPRAIETAKENAKLNGVEDRMKFIVGSA--FEEMEKLQ  212 (324)
T ss_dssp             GCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEE----SCHHHHHHHHHHHHHTTCGGGEEEEESCH--HHHHHHHH
T ss_pred             hcCCCCeeecccC--cccchhhhhhhc-CCcEEEeec----CCHHHHHHHHHHHHHcCCCccceeeechh--hhhhHHHH
Confidence            4688999987766  444455555554 66 566666    5788777664    45553   2222221  12232222


Q ss_pred             cCCCCccEEEECCC---c-------------ccHHHHHhhccCCCeeC
Q 023007          257 ANLPEPALGFNCVG---G-------------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g---~-------------~~~~~a~~~l~~~G~~v  288 (288)
                      ....+||+|+--..   .             .....++++|+|||.++
T Consensus       213 ~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv  260 (324)
T d2as0a2         213 KKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILV  260 (324)
T ss_dssp             HTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred             hccCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence            22125998775222   1             12367788999999875

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.59  E-value=0.02  Score=47.40  Aligned_cols=100  Identities=16%  Similarity=0.072  Sum_probs=51.3

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCC---EEEeCCcccHHHHHH
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGAD---EVFTESQLEVKNVKG  254 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~i~~  254 (288)
                      ++.+...+.+|++||-+|+ | .|.+++.+++ .|+ +|+++... .......+..+.-+..   .++......      
T Consensus        24 ai~~~~~~~~~~~VLDiGc-G-~G~ls~~aa~-~Ga~~V~avd~s-~~~~~a~~~~~~n~~~~~v~~~~~~~~~------   93 (316)
T d1oria_          24 SMFHNRHLFKDKVVLDVGS-G-TGILCMFAAK-AGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEE------   93 (316)
T ss_dssp             HHHTCHHHHTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEECS-TTHHHHHHHHHHTTCTTTEEEEESCTTT------
T ss_pred             HHHhccccCCcCEEEEEec-C-CcHHHHHHHH-hCCCEEEEEcCc-HHHhhhhhHHHHhCCccccceEeccHHH------
Confidence            3433234568999999988 3 3667766666 576 57666522 1111222333444432   222222211      


Q ss_pred             HhcCCCCccEEEECCCc------ccH----HHHHhhccCCCeeC
Q 023007          255 LLANLPEPALGFNCVGG------NSA----SKVLKFLRFREEQW  288 (288)
Q Consensus       255 ~~~~~g~~D~v~d~~g~------~~~----~~a~~~l~~~G~~v  288 (288)
                      +.....++|+|+.....      ...    ...-++|+|+|+++
T Consensus        94 ~~~~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_          94 VELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cccccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            11111258998763221      122    33457999999874

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.49  E-value=0.11  Score=41.97  Aligned_cols=95  Identities=9%  Similarity=-0.020  Sum_probs=56.9

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh----CCCC------EEEeCCcccHHHHH
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG----LGAD------EVFTESQLEVKNVK  253 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~----~g~~------~v~~~~~~~~~~i~  253 (288)
                      .+.+++++||=+|+  +.|..++.+++. |++|+++.    .+++.++.+++    .+..      .+.+.+-...+  .
T Consensus        52 l~~~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD----~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  122 (292)
T d1xvaa_          52 LRQHGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVD----ASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD--K  122 (292)
T ss_dssp             HHHTTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEE----SCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH--H
T ss_pred             hhhcCCCEEEEecC--CCcHHHHHHHHc-CCeeeecc----CchHHHHHHHHHHHhcccccccceeeeeeccccccc--c
Confidence            34466789998888  567777888775 89999887    68887776642    2211      11111111111  1


Q ss_pred             HHhcCCCCccEEEECCCc---------------ccHHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNCVGG---------------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~~g~---------------~~~~~a~~~l~~~G~~v  288 (288)
                      ....+. .+|+|+.....               ..+..+.+.|+|||.|+
T Consensus       123 ~~~~~~-~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li  171 (292)
T d1xvaa_         123 DVPAGD-GFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLV  171 (292)
T ss_dssp             HSCCTT-CEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEE
T ss_pred             ccCCCC-CceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEE
Confidence            111122 49988864321               12478889999999975

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.45  E-value=0.26  Score=36.85  Aligned_cols=88  Identities=8%  Similarity=0.171  Sum_probs=51.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-H--------HHHHHHhcCCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-V--------KNVKGLLANLP  260 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~--------~~i~~~~~~~g  260 (288)
                      +|.|.|- |-+|...++.+... +.+++++.+..  .......+...+.......+... .        ..+.....   
T Consensus         3 KVaINGf-GRIGR~v~Ral~~~~dievVaInd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~---   76 (178)
T d1b7go1           3 NVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTS--PNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK---   76 (178)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSS--CSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH---
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCC--CcHHHHHhcccCcceeccCccceeccccceecCCchhhhhh---
Confidence            5889997 99999999998865 46888887653  33344444444433222211110 0        01111112   


Q ss_pred             CccEEEECCCcccH-HHHHhhccCC
Q 023007          261 EPALGFNCVGGNSA-SKVLKFLRFR  284 (288)
Q Consensus       261 ~~D~v~d~~g~~~~-~~a~~~l~~~  284 (288)
                      ++|+|+||+|.... +.+-.+++.+
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G  101 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQ  101 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcC
Confidence            29999999997554 5555555544

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.32  E-value=0.14  Score=42.24  Aligned_cols=95  Identities=13%  Similarity=0.025  Sum_probs=53.3

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEE--EeCCcccHHHHHHHhcC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEV--FTESQLEVKNVKGLLAN  258 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v--~~~~~~~~~~i~~~~~~  258 (288)
                      ...+|++||=.++  +.|..++.+++ .+.+|+.+.    .+++..+.++    ..|.+.+  +..+..  +....+...
T Consensus       142 ~~~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD----~s~~al~~a~~n~~~ngl~~~~~i~~d~~--~~~~~~~~~  212 (318)
T d1wxxa2         142 ERFRGERALDVFS--YAGGFALHLAL-GFREVVAVD----SSAEALRRAEENARLNGLGNVRVLEANAF--DLLRRLEKE  212 (318)
T ss_dssp             GGCCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEE----SCHHHHHHHHHHHHHTTCTTEEEEESCHH--HHHHHHHHT
T ss_pred             HHhCCCeeeccCC--CCcHHHHHHHh-cCCcEEeec----chHHHHHHHHHHHHHcCCCCcceeeccHH--HHhhhhHhh
Confidence            3457899987666  22444455554 356777776    5788877764    4565422  222221  222333222


Q ss_pred             CCCccEEEECC---C--c-----------ccHHHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCV---G--G-----------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~---g--~-----------~~~~~a~~~l~~~G~~v  288 (288)
                      ..+||+|+---   +  .           .....++++|+|||.++
T Consensus       213 ~~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv  258 (318)
T d1wxxa2         213 GERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILA  258 (318)
T ss_dssp             TCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred             hcCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            22599877421   1  1           12256788999999875

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.30  E-value=0.21  Score=38.33  Aligned_cols=96  Identities=15%  Similarity=0.031  Sum_probs=56.6

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHH----hCCCCEEEeCCcccHHHHHHHhcC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKLK----GLGADEVFTESQLEVKNVKGLLAN  258 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~i~~~~~~  258 (288)
                      ..++||++||=.|+  +.|..+..+++..+ .+|+++.    -+++..+.++    ..+....+..+......   ....
T Consensus        52 l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvD----is~~~i~~a~~~a~~~~ni~~i~~d~~~~~~---~~~~  122 (209)
T d1nt2a_          52 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVE----YSAKPFEKLLELVRERNNIIPLLFDASKPWK---YSGI  122 (209)
T ss_dssp             CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEEC----CCHHHHHHHHHHHHHCSSEEEECSCTTCGGG---TTTT
T ss_pred             CCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEe----CCHHHHHHHHHHhhccCCceEEEeeccCccc---cccc
Confidence            56899999999998  34556667777665 4777776    5777776653    34432222222211111   1111


Q ss_pred             CCCccEEEECCCc-c----cHHHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCVGG-N----SASKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~g~-~----~~~~a~~~l~~~G~~v  288 (288)
                      ...+|+++..... .    .+..+.+.|+|+|+++
T Consensus       123 ~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~  157 (209)
T d1nt2a_         123 VEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVV  157 (209)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEE
T ss_pred             cceEEEEEecccChhhHHHHHHHHHHHhccCCeEE
Confidence            1137777765432 1    1366778999999874

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.28  E-value=0.051  Score=34.95  Aligned_cols=32  Identities=19%  Similarity=0.212  Sum_probs=29.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++|.|+|+ |.+|.+.++.++.+|+++++...+
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~   33 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLD   33 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTT
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCC
Confidence            58999999 999999999999999999999743

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.22  E-value=0.23  Score=40.72  Aligned_cols=33  Identities=18%  Similarity=0.342  Sum_probs=29.4

Q ss_pred             CeE-EEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          190 DSI-VQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       190 ~~v-lI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++| ||+|++|-+|...+..+...|++|+++.+.
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            357 999999999999999999999999999853

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.07  E-value=0.2  Score=37.49  Aligned_cols=87  Identities=9%  Similarity=-0.007  Sum_probs=51.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC----EEEeCCc-ccHHHHHHHhcCCCCccEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD----EVFTESQ-LEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~----~v~~~~~-~~~~~i~~~~~~~g~~D~v  265 (288)
                      +|.|+|+ |..|.+.+..+...|.+|+...+.  .+++..+.+.+-...    ..+.... .....+.+...   ..|+|
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~--~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~ad~I   75 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTE--FDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE---NAEVV   75 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCG--GGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT---TCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEec--ccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHh---ccchh
Confidence            5889999 999999888888889999998742  123334444322110    0000000 00122333333   38999


Q ss_pred             EECCCcccHHHHHhhccC
Q 023007          266 FNCVGGNSASKVLKFLRF  283 (288)
Q Consensus       266 ~d~~g~~~~~~a~~~l~~  283 (288)
                      +.++....+...++.+.+
T Consensus        76 i~avps~~~~~~~~~l~~   93 (180)
T d1txga2          76 LLGVSTDGVLPVMSRILP   93 (180)
T ss_dssp             EECSCGGGHHHHHHHHTT
T ss_pred             hcccchhhhHHHHHhhcc
Confidence            999998887666655444

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.97  E-value=0.087  Score=39.47  Aligned_cols=34  Identities=12%  Similarity=0.041  Sum_probs=29.5

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCe-EEEEEcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIH-SINIIRDR  223 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~-vi~~~~~~  223 (288)
                      +++|+|+|+ |..|+.++..++..|++ |.++.+.+
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            589999999 99999999999999995 77776543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.95  E-value=0.22  Score=34.30  Aligned_cols=40  Identities=15%  Similarity=0.163  Sum_probs=34.7

Q ss_pred             hcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .....++++|+|.|+ |.+|+=.+..++..|.++..+.+.+
T Consensus        16 ~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          16 ELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            356778899999999 9999999999999999999998643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.92  E-value=0.078  Score=42.15  Aligned_cols=32  Identities=13%  Similarity=0.166  Sum_probs=29.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      |++|+|+|+ |.-|+.++..++..|.+|+++..
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~   32 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEA   32 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            588999999 99999999999999999998864

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.86  E-value=0.11  Score=39.05  Aligned_cols=36  Identities=17%  Similarity=0.076  Sum_probs=32.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ...+++|+|.|+ |+.|+.|+..+...|.+|++..+.
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~   75 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAH   75 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEecc
Confidence            455689999999 999999999999999999999854

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.83  E-value=0.12  Score=39.21  Aligned_cols=33  Identities=12%  Similarity=0.086  Sum_probs=30.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|+++.|+|. |.+|...+++++..|.+++....
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~   78 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDT   78 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECS
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccc
Confidence            3799999999 99999999999999999998863

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.79  E-value=0.11  Score=40.50  Aligned_cols=103  Identities=13%  Similarity=0.085  Sum_probs=60.5

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHH----HHhCCCCEEEeCCccc-HHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEK----LKGLGADEVFTESQLE-VKNV  252 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~----~~~~g~~~v~~~~~~~-~~~i  252 (288)
                      +....+....++||=+|.  ..|..++.+|+.+  +.+++.+.    .+++..+.    +++.|....+.....+ .+.+
T Consensus        51 L~~L~~~~~~k~vLEiGt--~~GyStl~~a~al~~~g~i~tie----~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l  124 (219)
T d2avda1          51 LANLARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCE----VDAQPPELGRPLWRQAEAEHKIDLRLKPALETL  124 (219)
T ss_dssp             HHHHHHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEE----SCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHH
T ss_pred             HHHHHHccCCCeEEEEec--hhhHHHHHHHHhCCCCceEEEEe----echhHHHHHHHHHHhcCccceEEEEEeehhhcc
Confidence            334455566689999987  5677778888765  46777776    35555444    4456654322222222 2333


Q ss_pred             HHHh--cCCCCccEEEECCC-cc---cHHHHHhhccCCCeeC
Q 023007          253 KGLL--ANLPEPALGFNCVG-GN---SASKVLKFLRFREEQW  288 (288)
Q Consensus       253 ~~~~--~~~g~~D~v~d~~g-~~---~~~~a~~~l~~~G~~v  288 (288)
                      .++.  +..+.+|.||--.. ..   .++.++++|++||.++
T Consensus       125 ~~~~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii  166 (219)
T d2avda1         125 DELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILA  166 (219)
T ss_dssp             HHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEE
T ss_pred             hhhhhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEE
Confidence            3321  11225998765433 22   2378899999999874

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.75  E-value=0.23  Score=34.57  Aligned_cols=43  Identities=16%  Similarity=0.040  Sum_probs=35.1

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .+.....-.++++|+|.|+ |.+|+-+++.+..+|.+|..+...
T Consensus        20 ~i~~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~   62 (123)
T d1nhpa2          20 KLKQKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDIL   62 (123)
T ss_dssp             HHHHHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             HHHHHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEec
Confidence            3444445566789999999 999999999999999999998754

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.63  E-value=2  Score=34.81  Aligned_cols=60  Identities=20%  Similarity=0.235  Sum_probs=49.2

Q ss_pred             hcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe
Q 023007          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (288)
Q Consensus       183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~  243 (288)
                      .+.++++.+.+|...+|..|++.+..++.+|.+.++++... .++.+.+.++.+|++-++.
T Consensus        58 ~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~-~~~~k~~~i~~~Ga~vi~~  117 (320)
T d1z7wa1          58 KGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPAS-MSTERRIILLAFGVELVLT  117 (320)
T ss_dssp             TTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT-SCHHHHHHHHHTTCEEEEE
T ss_pred             cCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhh-hhhhhhhhhhccCcceEEe
Confidence            35667777777777779999999999999999988887654 5888999999999976543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.50  E-value=0.54  Score=34.12  Aligned_cols=43  Identities=19%  Similarity=0.137  Sum_probs=36.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGA  238 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~  238 (288)
                      +|.|+|. |.+|...+.-+...|.+|++..    .++++.+.+.+.+.
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d----~~~~~~~~~~~~~~   44 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSD----RNPEAIADVIAAGA   44 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEEC----SCHHHHHHHHHTTC
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEe----CCcchhHHHHHhhh
Confidence            4788999 9999998888888899999886    57888888777665

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=91.42  E-value=0.66  Score=33.71  Aligned_cols=88  Identities=11%  Similarity=0.202  Sum_probs=51.1

Q ss_pred             CeEEEeCCCChHHH-HHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          190 DSIVQNGATSIVGQ-CIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       190 ~~vlI~g~~g~vG~-~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      -++.|+|+ |.+|. ..+++++.. ..+++.+++... ......+.+++|......    .++.+.+...-. ++|+||+
T Consensus         5 irvaIIGa-G~ig~~~~~~~l~~~~~~el~avas~~~-~~~~~~~a~~~~i~~~~~----~~d~l~~~~~~~-~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDA-ASDGLARAQRMGVTTTYA----GVEGLIKLPEFA-DIDFVFD   77 (157)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCT-TCHHHHHHHHTTCCEESS----HHHHHHHSGGGG-GEEEEEE
T ss_pred             cEEEEEcC-cHHHHHHHHHHHhhCCcceEEEEEecch-hccchhhhhhcCCccccc----ceeeeeeccccc-ccCEEEE
Confidence            47899995 99987 467777765 457777775321 123456777888654321    123333322222 3999999


Q ss_pred             CCCcc-cHHH--HHhhccCC
Q 023007          268 CVGGN-SASK--VLKFLRFR  284 (288)
Q Consensus       268 ~~g~~-~~~~--a~~~l~~~  284 (288)
                      ++... ....  +.+.++.|
T Consensus        78 ATpag~h~~~~~~~~aa~~G   97 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKPG   97 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT
T ss_pred             cCCchhHHHhHHHHHHHHcC
Confidence            98753 3333  34445444

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.41  E-value=0.61  Score=33.02  Aligned_cols=77  Identities=14%  Similarity=0.120  Sum_probs=50.3

Q ss_pred             eEEEeCCCChHHHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCccc-H-HHHHHHhcCCCCccEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLE-V-KNVKGLLANLPEPALGFN  267 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~-~~i~~~~~~~g~~D~v~d  267 (288)
                      +|.|.|++|-+|...++.... .++++....+.    .+.......-++|-++|..... . +.+......  +.-+|+=
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~----~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~--~~~~ViG   74 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDA----GDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDN--GIHAVVG   74 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECT----TCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHT--TCEEEEC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec----CCchhhhccccCCEEEEcccHHHHHHHHHHHHhc--CCCEEEe
Confidence            589999999999998887654 56788887743    2223344456788888875442 2 333333332  3788888


Q ss_pred             CCCccc
Q 023007          268 CVGGNS  273 (288)
Q Consensus       268 ~~g~~~  273 (288)
                      ++|-..
T Consensus        75 TTG~~~   80 (135)
T d1yl7a1          75 TTGFTA   80 (135)
T ss_dssp             CCCCCH
T ss_pred             ccccch
Confidence            888543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.41  E-value=1  Score=37.30  Aligned_cols=30  Identities=10%  Similarity=0.292  Sum_probs=24.8

Q ss_pred             eEEEeCCCChHHHHHHH-HHHHcCCeEEEEE
Q 023007          191 SIVQNGATSIVGQCIIQ-IARHRGIHSINII  220 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~-la~~~g~~vi~~~  220 (288)
                      +|||+|++|-+|...+. |++..|.+|+++.
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            69999999999987665 5567899998874

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.41  E-value=0.17  Score=38.24  Aligned_cols=34  Identities=12%  Similarity=0.078  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .|.++.|.|. |.+|...++.++.+|.+|+.....
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~   76 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRH   76 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSS
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeec
Confidence            5789999999 999999999999999999988743

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.27  E-value=0.031  Score=42.65  Aligned_cols=89  Identities=11%  Similarity=0.079  Sum_probs=54.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCCEE-EeCCcccHHHHHHHhcCCC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGADEV-FTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~~v-~~~~~~~~~~i~~~~~~~g  260 (288)
                      +++ .+||=+|+ | .|..+..++++ |++|+++.    .+++.++.++    +.+.+.+ +...+     +..+... +
T Consensus        29 ~~~-grvLDiGc-G-~G~~~~~la~~-g~~v~gvD----~s~~~l~~a~~~~~~~~~~~~~~~~~d-----~~~~~~~-~   94 (198)
T d2i6ga1          29 VAP-GRTLDLGC-G-NGRNSLYLAAN-GYDVTAWD----KNPASMANLERIKAAEGLDNLQTDLVD-----LNTLTFD-G   94 (198)
T ss_dssp             SCS-CEEEEETC-T-TSHHHHHHHHT-TCEEEEEE----SCHHHHHHHHHHHHHTTCTTEEEEECC-----TTTCCCC-C
T ss_pred             CCC-CcEEEECC-C-CCHHHHHHHHH-hhhhcccc----CcHHHHHHHHHHhhhccccchhhhhee-----ccccccc-c
Confidence            455 48999998 3 78888877764 99998886    5777776553    4555422 11111     0011111 2


Q ss_pred             CccEEEECCCc-----c----cHHHHHhhccCCCeeC
Q 023007          261 EPALGFNCVGG-----N----SASKVLKFLRFREEQW  288 (288)
Q Consensus       261 ~~D~v~d~~g~-----~----~~~~a~~~l~~~G~~v  288 (288)
                      .+|+|+...--     +    .+..+.++|+|+|+++
T Consensus        95 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~  131 (198)
T d2i6ga1          95 EYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNL  131 (198)
T ss_dssp             CEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEE
T ss_pred             cccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEE
Confidence            49998864321     1    2266778899999874

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.26  E-value=0.29  Score=36.34  Aligned_cols=49  Identities=20%  Similarity=0.093  Sum_probs=33.9

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKL  233 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~  233 (288)
                      +|.+...--+|++|+|+|+ |+++.+++..+...| ++.+..    ++.++.+.+
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~n----R~~~ka~~l   56 (177)
T d1nvta1           8 ALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIAN----RTVEKAEAL   56 (177)
T ss_dssp             HHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEEC----SSHHHHHHH
T ss_pred             HHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeeh----hhhhHHHHH
Confidence            4444344457799999999 999988877776555 777666    466665543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=91.24  E-value=0.15  Score=42.12  Aligned_cols=79  Identities=13%  Similarity=0.171  Sum_probs=44.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC---CCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA---GSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~---~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      .+|||+||+|-+|...+..+...|.+|.+++.+..   .+..+......-++.. +..+-.+.+.+..+..+   +|.|+
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~-~~~Di~d~~~~~~~~~~---~~~v~   78 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVEL-VVGDIADAELVDKLAAK---ADAIV   78 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEE-EECCTTCHHHHHHHHTT---CSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEE-EEccCCCHHHHHHHHhh---hhhhh
Confidence            57999999999999999988888876544432211   1122211111111111 11111234556666554   78888


Q ss_pred             ECCCcc
Q 023007          267 NCVGGN  272 (288)
Q Consensus       267 d~~g~~  272 (288)
                      .+++..
T Consensus        79 ~~a~~~   84 (346)
T d1oc2a_          79 HYAAES   84 (346)
T ss_dssp             ECCSCC
T ss_pred             hhhhcc
Confidence            887653

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=91.22  E-value=0.58  Score=30.51  Aligned_cols=67  Identities=16%  Similarity=0.099  Sum_probs=46.1

Q ss_pred             eEEEeCCCChHHHH-HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQC-IIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~-a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|-++|- |++|+. .+++++..|++|......   ..+..+.++++|..-....+...   +      . +.|+|+-..
T Consensus         3 ~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~---~~~~t~~L~~~Gi~i~~gh~~~~---i------~-~~d~vV~Ss   68 (89)
T d1j6ua1           3 KIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIE---ETERTAYLRKLGIPIFVPHSADN---W------Y-DPDLVIKTP   68 (89)
T ss_dssp             EEEEETT-TSHHHHHHHHHHHHTTCEEEEECSS---CCHHHHHHHHTTCCEESSCCTTS---C------C-CCSEEEECT
T ss_pred             EEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCC---CChhHHHHHHCCCeEEeeecccc---c------C-CCCEEEEec
Confidence            5777888 899986 479999999999999643   33555678999986443322221   1      1 389888776


Q ss_pred             Cc
Q 023007          270 GG  271 (288)
Q Consensus       270 g~  271 (288)
                      +-
T Consensus        69 AI   70 (89)
T d1j6ua1          69 AV   70 (89)
T ss_dssp             TC
T ss_pred             Cc
Confidence            54

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=91.20  E-value=0.58  Score=38.29  Aligned_cols=66  Identities=12%  Similarity=0.285  Sum_probs=48.8

Q ss_pred             HHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe
Q 023007          176 ALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (288)
Q Consensus       176 a~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~  243 (288)
                      |++.+.....-.+..+|+.. .+|..|.+.+..++..|.++++++... .+.++.+.++.+|++-++.
T Consensus        62 a~~~i~~~~~~~~~~~vv~a-ssGN~g~a~A~~a~~~g~~~~i~~p~~-~~~~k~~~l~~~Ga~vi~~  127 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITA-SAGNHAQGVAFSSARLGVKALIVMPTA-TADIKVDAVRGFGGEVLLH  127 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEE-ECSSSHHHHHHHHHHTTCCEEEECCSS-CCHHHHHHHHHHSCEEECC
T ss_pred             HHHHHHHHHHhCCCCeeeec-ccchhHHHHHHhhccccccceeecccc-chhHHHHHHHhcCCEEEEc
Confidence            45555543333444555554 449999999999999999999887655 5888889999999986654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.17  E-value=0.45  Score=32.47  Aligned_cols=34  Identities=15%  Similarity=0.074  Sum_probs=30.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .++++|.|+ |.+|+=+++.+..+|.+|.++.+.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            478999999 9999999999999999999998543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.90  E-value=0.28  Score=38.92  Aligned_cols=41  Identities=10%  Similarity=0.100  Sum_probs=34.2

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +.....--.|++|+|.|- |.+|..+++++...|++++++.+
T Consensus        27 ~~~~~~~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          27 MKHENDTLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             HHHTTCCSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             HHhCCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            333333347899999998 99999999999999999999875

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.90  E-value=0.25  Score=37.35  Aligned_cols=37  Identities=16%  Similarity=0.278  Sum_probs=31.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE  231 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  231 (288)
                      ++|.|+|+ |.+|...++++...|++|+...    .+++.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D----~~~~~l~   41 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVD----QTEDILA   41 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEC----SCHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEE----CChHHHH
Confidence            58999999 9999999999999999999987    4565544

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=90.81  E-value=0.43  Score=35.28  Aligned_cols=42  Identities=14%  Similarity=0.155  Sum_probs=33.9

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL  236 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~  236 (288)
                      .+|.++|. |.+|...+.-+...|++|++..    .++++.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~d----r~~~~~~~l~~~   44 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFN----RTVSKVDDFLAN   44 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEEC----SSTHHHHHHHHT
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEc----CCHHHHHHHHHh
Confidence            46889999 9999998888888899999887    567777666443

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=90.69  E-value=0.36  Score=38.37  Aligned_cols=91  Identities=9%  Similarity=-0.042  Sum_probs=59.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCC-EEEeCCcccHHHHHHHhcCCCCcc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGAD-EVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      ..++.+||=+|+  +.|..+..+++.. +.+++++.    .+++..+.+++-... .++..+...   + .+.++  .+|
T Consensus        82 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD----~s~~~~~~a~~~~~~~~~~~~d~~~---l-~~~~~--sfD  149 (268)
T d1p91a_          82 DDKATAVLDIGC--GEGYYTHAFADALPEITTFGLD----VSKVAIKAAAKRYPQVTFCVASSHR---L-PFSDT--SMD  149 (268)
T ss_dssp             CTTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEE----SCHHHHHHHHHHCTTSEEEECCTTS---C-SBCTT--CEE
T ss_pred             CCCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEec----chHhhhhhhhcccccccceeeehhh---c-cCCCC--CEE
Confidence            466788988888  4566666777765 56888876    578888877653322 222221111   0 01122  499


Q ss_pred             EEEECCCcccHHHHHhhccCCCeeC
Q 023007          264 LGFNCVGGNSASKVLKFLRFREEQW  288 (288)
Q Consensus       264 ~v~d~~g~~~~~~a~~~l~~~G~~v  288 (288)
                      +|+..-.-..+....+.|+|||+++
T Consensus       150 ~v~~~~~~~~~~e~~rvLkpgG~l~  174 (268)
T d1p91a_         150 AIIRIYAPCKAEELARVVKPGGWVI  174 (268)
T ss_dssp             EEEEESCCCCHHHHHHHEEEEEEEE
T ss_pred             EEeecCCHHHHHHHHHHhCCCcEEE
Confidence            9998776666788999999999874

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.67  E-value=0.11  Score=37.67  Aligned_cols=33  Identities=15%  Similarity=0.081  Sum_probs=30.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++|||.|+ |.+|..-+..+...|++|+++..
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            5799999999 99999999999999999999963

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=90.58  E-value=0.096  Score=41.82  Aligned_cols=28  Identities=25%  Similarity=0.209  Sum_probs=22.6

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINI  219 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~  219 (288)
                      +|||+|++|-+|...+..+...|. ++.+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~   29 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIAL   29 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEE
Confidence            599999999999999888877775 4444

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.54  E-value=0.54  Score=34.65  Aligned_cols=90  Identities=16%  Similarity=0.140  Sum_probs=55.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC-------EE-------EeCCcccH---HHHH
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD-------EV-------FTESQLEV---KNVK  253 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~-------~v-------~~~~~~~~---~~i~  253 (288)
                      +|.|.|- |-+|.++.+.+...+.+++++-+.  .+.+...++-+..-.       --       ++.+.-.+   ....
T Consensus         2 kigINGf-GRIGR~~~R~l~~~~i~iv~INd~--~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~   78 (168)
T d2g82a1           2 KVGINGF-GRIGRQVFRILHSRGVEVALINDL--TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK   78 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEEECS--SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred             EEEEECC-cHHHHHHHHHHhcCCCEEEEECCC--cchhhhhheeecccccCccccccccccceeEecceeEEEEecCChH
Confidence            5788888 999999999988889999988865  467777777443311       10       11000000   0111


Q ss_pred             HHh-cCCCCccEEEECCCcccH-HHHHhhccCC
Q 023007          254 GLL-ANLPEPALGFNCVGGNSA-SKVLKFLRFR  284 (288)
Q Consensus       254 ~~~-~~~g~~D~v~d~~g~~~~-~~a~~~l~~~  284 (288)
                      ++. ... ++|+|+||+|.... +.+...++.+
T Consensus        79 ~i~W~~~-gvdiViEcTG~f~~~~~~~~hl~~g  110 (168)
T d2g82a1          79 EIPWAEA-GVGVVIESTGVFTDADKAKAHLEGG  110 (168)
T ss_dssp             GCCTGGG-TEEEEEECSSSCCBHHHHTHHHHTT
T ss_pred             HCccccc-CCceeEeccccccchHHhhhhhccc
Confidence            110 112 39999999997665 6666666543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.49  E-value=0.16  Score=39.76  Aligned_cols=50  Identities=24%  Similarity=0.201  Sum_probs=38.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCC----------CCHHHHHHHHhCCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRA----------GSDEAKEKLKGLGA  238 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~----------~~~~~~~~~~~~g~  238 (288)
                      ..++|+|+|+ |..|++++..++..|.+|+++.+.+.          .++...+.++++|.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~~~~~~~~g~~~~~~~~~~l~~~g~   62 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGV   62 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTC
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceEEEECccHHHHHHHcCc
Confidence            3578999999 99999999999999999999875321          13455566666664

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.39  E-value=0.33  Score=37.78  Aligned_cols=97  Identities=10%  Similarity=-0.034  Sum_probs=57.2

Q ss_pred             hcCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhC----CCCEEEeCCcccHHHHHHHhc
Q 023007          183 FTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGL----GADEVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       183 ~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~i~~~~~  257 (288)
                      ...++||++||=+|+  +.|..+..+++.. +.+|+++.    -+++..+.+++.    +....+.........   ...
T Consensus        69 ~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVD----iS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~---~~~  139 (230)
T d1g8sa_          69 VMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIE----YAPRIMRELLDACAERENIIPILGDANKPQE---YAN  139 (230)
T ss_dssp             CCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEE----SCHHHHHHHHHHTTTCTTEEEEECCTTCGGG---GTT
T ss_pred             hCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEe----CcHHHHHHHHHHHhhhcccceEEEeeccCcc---ccc
Confidence            356899999999998  4466677777764 35788887    578777766542    222222222211111   111


Q ss_pred             CCCCccEEEECCCcc----c-HHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFNCVGGN----S-ASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d~~g~~----~-~~~a~~~l~~~G~~v  288 (288)
                      ....+|+++......    . +..+.+.|+|+|+++
T Consensus       140 ~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~  175 (230)
T d1g8sa_         140 IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGM  175 (230)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEE
T ss_pred             ccceeEEeeccccchHHHHHHHHHHHHhcccCceEE
Confidence            111266666655431    1 266678999999874

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.30  E-value=0.72  Score=33.44  Aligned_cols=45  Identities=18%  Similarity=0.051  Sum_probs=36.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD  239 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~  239 (288)
                      ++|.++|. |.+|...+.-+...|++|++..    .+.++.+.+.+.+..
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d----~~~~~~~~~~~~~~~   46 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFD----LVQSAVDGLVAAGAS   46 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEEC----SSHHHHHHHHHTTCE
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEE----Cchhhhhhhhhhhcc
Confidence            46889999 9999988887777899999887    578888877776654

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.96  E-value=0.5  Score=35.41  Aligned_cols=94  Identities=15%  Similarity=0.028  Sum_probs=56.7

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC----EEEeCCcccHHH
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD----EVFTESQLEVKN  251 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~----~v~~~~~~~~~~  251 (288)
                      +.......++++||=.|+  +.|..++.+++ .+.+++++.    .++...+.++    ..+..    .++..+..  + 
T Consensus        44 Li~~l~~~~~~~VLDiGc--G~G~~~~~la~-~~~~v~~iD----~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~--~-  113 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGC--GYGVIGIALAD-EVKSTTMAD----INRRAIKLAKENIKLNNLDNYDIRVVHSDLY--E-  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETC--TTSHHHHHHGG-GSSEEEEEE----SCHHHHHHHHHHHHHTTCTTSCEEEEECSTT--T-
T ss_pred             HHHhCCcCCCCeEEEEee--cCChhHHHHHh-hccccceee----eccccchhHHHHHHHhCCccceEEEEEcchh--h-
Confidence            444567889999998888  44566666665 467888876    5777777664    23322    12221111  1 


Q ss_pred             HHHHhcCCCCccEEEECC----Ccc----cHHHHHhhccCCCee
Q 023007          252 VKGLLANLPEPALGFNCV----GGN----SASKVLKFLRFREEQ  287 (288)
Q Consensus       252 i~~~~~~~g~~D~v~d~~----g~~----~~~~a~~~l~~~G~~  287 (288)
                        ...++  .+|+|+-..    +.+    .++.+.+.|+|+|++
T Consensus       114 --~~~~~--~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l  153 (194)
T d1dusa_         114 --NVKDR--KYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEI  153 (194)
T ss_dssp             --TCTTS--CEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEE
T ss_pred             --hhccC--CceEEEEcccEEecchhhhhHHHHHHHhcCcCcEE
Confidence              11122  499988632    222    237778899999986

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.95  E-value=0.21  Score=40.57  Aligned_cols=92  Identities=14%  Similarity=0.076  Sum_probs=53.8

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC---------CC-EEEeCCcccHHHHHHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG---------AD-EVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g---------~~-~v~~~~~~~~~~i~~~~~  257 (288)
                      .-++|||+|+  +-|..+-.+++..+.+.+..++   -+++-.+.++++-         .. .++..+  ..+.+.+.++
T Consensus        80 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VE---iD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~D--a~~~l~~~~~  152 (290)
T d1xj5a_          80 NPKKVLVIGG--GDGGVLREVARHASIEQIDMCE---IDKMVVDVSKQFFPDVAIGYEDPRVNLVIGD--GVAFLKNAAE  152 (290)
T ss_dssp             CCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEE---SCHHHHHHHHHHCHHHHGGGGSTTEEEEESC--HHHHHHTSCT
T ss_pred             CCcceEEecC--CchHHHHHHHhcccceeeEEec---CCHHHHHHHHHhchhhhccccCCCcEEEEcc--HHHHHhhccc
Confidence            3479999997  3355566778877765555554   4677777776531         11 111111  1234444333


Q ss_pred             CCCCccEEE-ECCCc----------ccHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGF-NCVGG----------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~-d~~g~----------~~~~~a~~~l~~~G~~v  288 (288)
                      +  ++|+|| |+...          +.++.+.++|+++|.+|
T Consensus       153 ~--~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v  192 (290)
T d1xj5a_         153 G--SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVC  192 (290)
T ss_dssp             T--CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEE
T ss_pred             c--CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEE
Confidence            3  599755 44321          23478888999999875

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=89.58  E-value=0.66  Score=33.74  Aligned_cols=80  Identities=11%  Similarity=0.086  Sum_probs=48.5

Q ss_pred             eEEEeCCCChHHHH-HHHHHHHc-CCeEEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          191 SIVQNGATSIVGQC-IIQIARHR-GIHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       191 ~vlI~g~~g~vG~~-a~~la~~~-g~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +|.|+|+ |.+|.- .+...+.. +.+++ +++   .++++.+ ..++++...+++.-+    .+   ...  ++|+|+-
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~-~~d---~~~~~~~~~~~~~~~~~~~~~~~----~l---l~~--~iD~V~I   68 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELV-LCT---RNPKVLGTLATRYRVSATCTDYR----DV---LQY--GVDAVMI   68 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEE-EEC---SCHHHHHHHHHHTTCCCCCSSTT----GG---GGG--CCSEEEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEE-EEE---CCHHHHHHHHHhcccccccccHH----Hh---ccc--ccceecc
Confidence            5889999 888854 55556555 45654 454   3555555 445677654433211    11   121  3899998


Q ss_pred             CCCccc-HHHHHhhccCC
Q 023007          268 CVGGNS-ASKVLKFLRFR  284 (288)
Q Consensus       268 ~~g~~~-~~~a~~~l~~~  284 (288)
                      |+.... .+.+.++++.|
T Consensus        69 ~tp~~~H~~~~~~al~~g   86 (167)
T d1xeaa1          69 HAATDVHSTLAAFFLHLG   86 (167)
T ss_dssp             CSCGGGHHHHHHHHHHTT
T ss_pred             cccccccccccccccccc
Confidence            887755 37777777655

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.52  E-value=0.26  Score=39.89  Aligned_cols=33  Identities=12%  Similarity=0.188  Sum_probs=30.9

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++|+|.|- |.||..+++.+...|++++++.+
T Consensus        35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            5789999999 99999999999999999999875

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=89.49  E-value=0.24  Score=37.20  Aligned_cols=88  Identities=16%  Similarity=0.135  Sum_probs=48.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHH-HhCCC-CEEEeCCcccHHHHHHHhcCCCCccEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRG-IHSINIIRDRAGSDEAKEKL-KGLGA-DEVFTESQLEVKNVKGLLANLPEPALGFN  267 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g-~~vi~~~~~~~~~~~~~~~~-~~~g~-~~v~~~~~~~~~~i~~~~~~~g~~D~v~d  267 (288)
                      +|.|+|++|-+|+-.++++..+- .++..+.... ...++.... ..+.. +.......     ......   ++|++|-
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~-~aG~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~Dvvf~   77 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADR-KAGEQFGSVFPHLITQDLPNLVAV-----KDADFS---NVDAVFC   77 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECST-TTTSCHHHHCGGGTTSCCCCCBCG-----GGCCGG---GCSEEEE
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccc-cCCCccccccccccccccccchhh-----hhhhhc---ccceeee
Confidence            68999999999999999998764 4655554221 112222211 11111 10000000     000011   3899999


Q ss_pred             CCCcccHHHHHhhccCCCee
Q 023007          268 CVGGNSASKVLKFLRFREEQ  287 (288)
Q Consensus       268 ~~g~~~~~~a~~~l~~~G~~  287 (288)
                      |.+..........+...|..
T Consensus        78 alp~~~s~~~~~~l~~~~~~   97 (183)
T d2cvoa1          78 CLPHGTTQEIIKGLPQELKI   97 (183)
T ss_dssp             CCSSSHHHHHHHTSCSSCEE
T ss_pred             ccccchHHHHHHHHHhcCcc
Confidence            99988875555666665554

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.43  E-value=0.55  Score=33.61  Aligned_cols=33  Identities=12%  Similarity=0.214  Sum_probs=27.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCC-eEEEEEcC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGI-HSINIIRD  222 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~  222 (288)
                      .+|.|+||+|.+|...+.++...|. +-++..|.
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi   34 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI   34 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEec
Confidence            3689999889999999999998886 66777665

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.40  E-value=0.2  Score=40.26  Aligned_cols=35  Identities=14%  Similarity=0.154  Sum_probs=30.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ....++|+|+|+ |..|+.++..++..|.+|.++..
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~   61 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEA   61 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeC
Confidence            455579999999 99999999999989999998863

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.38  E-value=3.1  Score=33.04  Aligned_cols=57  Identities=26%  Similarity=0.334  Sum_probs=45.5

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~  242 (288)
                      ..+++|.+|.. ..+|..|.+++..++.+|.+.++++... .++.+...++.+|++-+.
T Consensus        56 g~~~~~~~vv~-assGn~g~a~A~~a~~~g~~~~i~~p~~-~~~~k~~~~~~~ga~v~~  112 (302)
T d1fcja_          56 GVLKPGVELVE-PTNGNTGIALAYVAAARGYKLTLTMPET-MSIERRKLLKALGANLVL  112 (302)
T ss_dssp             TCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEE
T ss_pred             CCCCCCceEEE-eccccchhHHHHHHHHhccCCceEEeec-CcHHHHHHHHHhccceEE
Confidence            56777766554 5559999999999999999988887655 478888899999987654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.35  E-value=0.19  Score=40.11  Aligned_cols=91  Identities=12%  Similarity=-0.015  Sum_probs=57.4

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC---EEEeCCcccHHHHHHHh
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD---EVFTESQLEVKNVKGLL  256 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~i~~~~  256 (288)
                      ..+++|++||-.++  ++|..++.+|+.-+++|+++.    .+++..+.++    ..+.+   .+++.+..      ++.
T Consensus       103 ~~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd----~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~------~~~  170 (260)
T d2frna1         103 KVAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIE----KDPYTFKFLVENIHLNKVEDRMSAYNMDNR------DFP  170 (260)
T ss_dssp             HHCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEEC----CCHHHHHHHHHHHHHTTCTTTEEEECSCTT------TCC
T ss_pred             hhcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEec----CCHHHHHHHHHHHHHhCCCceEEEEEcchH------Hhc
Confidence            34789999998887  556666777776556888886    6888877774    34443   23333221      111


Q ss_pred             cCCCCccEEE-ECC-Cc-ccHHHHHhhccCCCee
Q 023007          257 ANLPEPALGF-NCV-GG-NSASKVLKFLRFREEQ  287 (288)
Q Consensus       257 ~~~g~~D~v~-d~~-g~-~~~~~a~~~l~~~G~~  287 (288)
                      .. +.+|.|+ +.- .+ ..+..+++.+++||.+
T Consensus       171 ~~-~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~l  203 (260)
T d2frna1         171 GE-NIADRILMGYVVRTHEFIPKALSIAKDGAII  203 (260)
T ss_dssp             CC-SCEEEEEECCCSSGGGGHHHHHHHEEEEEEE
T ss_pred             cC-CCCCEEEECCCCchHHHHHHHHhhcCCCCEE
Confidence            22 2488655 432 23 3348899999999975

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=89.33  E-value=0.94  Score=33.40  Aligned_cols=82  Identities=12%  Similarity=0.004  Sum_probs=52.1

Q ss_pred             eEEEeCCCChHHHH-HHHHHHHcC--CeEEEEEcCCCCCHHHHH-HHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEE
Q 023007          191 SIVQNGATSIVGQC-IIQIARHRG--IHSINIIRDRAGSDEAKE-KLKGLGADEVFTESQLEVKNVKGLLANLPEPALGF  266 (288)
Q Consensus       191 ~vlI~g~~g~vG~~-a~~la~~~g--~~vi~~~~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~  266 (288)
                      +|.|.|+ |.+|.- .+...+..+  .+++++++   .++++.+ +.++++...+++.    .+.+.   ... .+|+|+
T Consensus         5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d---~~~~~~~~~~~~~~~~~~~~~----~~ell---~~~-~id~v~   72 (181)
T d1zh8a1           5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTS---RTRSHAEEFAKMVGNPAVFDS----YEELL---ESG-LVDAVD   72 (181)
T ss_dssp             EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEEC---SSHHHHHHHHHHHSSCEEESC----HHHHH---HSS-CCSEEE
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEe---ccHhhhhhhhccccccceeee----eeccc---ccc-ccceee
Confidence            6889998 888864 566666543  47787875   3555554 4456776655432    22332   222 499999


Q ss_pred             ECCCccc-HHHHHhhccCC
Q 023007          267 NCVGGNS-ASKVLKFLRFR  284 (288)
Q Consensus       267 d~~g~~~-~~~a~~~l~~~  284 (288)
                      -|+.... ...+..+++.+
T Consensus        73 I~tp~~~h~~~~~~al~~g   91 (181)
T d1zh8a1          73 LTLPVELNLPFIEKALRKG   91 (181)
T ss_dssp             ECCCGGGHHHHHHHHHHTT
T ss_pred             ccccccccccccccccccc
Confidence            9987654 47777777654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.32  E-value=0.24  Score=38.42  Aligned_cols=37  Identities=16%  Similarity=0.109  Sum_probs=32.4

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .+.+++|+|+|+ |..|+.++..++..|.+|+++...+
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            356789999999 9999999999999999999997543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.25  E-value=0.44  Score=32.93  Aligned_cols=38  Identities=18%  Similarity=0.323  Sum_probs=33.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .+.++++++|.|+ |.+|.=.+..++.+|.+|..+...+
T Consensus        26 ~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          26 GLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             HCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            3567799999999 9999999999999999999998654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=89.23  E-value=0.4  Score=32.96  Aligned_cols=38  Identities=18%  Similarity=0.302  Sum_probs=32.8

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .++..++|+|.|+ |.+|+=.+..+..+|.+|.++.+.+
T Consensus        18 ~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             ccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            3455689999999 9999999999999999999998643

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=89.17  E-value=0.9  Score=38.10  Aligned_cols=57  Identities=19%  Similarity=0.243  Sum_probs=46.4

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~  243 (288)
                      ++++|.+ +|...+|..|++.+..|+.+|.+.++++... .++++.+.++.+|++-+..
T Consensus       140 ~~~~g~~-VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~-~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         140 RVEKGSL-VADATSSNFGVALSAVARLYGYRARVYLPGA-AEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TSCTTCE-EEEECCHHHHHHHHHHHHHTTCEEEEEEETT-SCHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCE-EEEeCCcHHHHHHHHHHHHcCCCEEEEeecc-ccccccccccccCcceeec
Confidence            4677765 4555669999999999999999999888654 5888889999999986654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=89.16  E-value=0.28  Score=37.86  Aligned_cols=36  Identities=22%  Similarity=0.365  Sum_probs=31.0

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ++.-++|+|+|+ |..|++++..++..|.+|.++.+.
T Consensus         3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            345568999999 999999999999999999988753

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.98  E-value=0.065  Score=44.39  Aligned_cols=38  Identities=18%  Similarity=0.261  Sum_probs=24.3

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCC-eEEEEE
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGI-HSINII  220 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~  220 (288)
                      +.+.....+|++||-+|+ | .|.++..+++ .|+ +|+++.
T Consensus        30 I~~~~~~~~~~~VLDlGc-G-tG~ls~~aa~-~Ga~~V~avd   68 (328)
T d1g6q1_          30 IIQNKDLFKDKIVLDVGC-G-TGILSMFAAK-HGAKHVIGVD   68 (328)
T ss_dssp             HHHHHHHHTTCEEEEETC-T-TSHHHHHHHH-TCCSEEEEEE
T ss_pred             HHhccccCCcCEEEEeCC-C-CCHHHHHHHH-hCCCEEEEEe
Confidence            433344568899999998 3 4566655555 577 566665

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=88.66  E-value=1.4  Score=30.31  Aligned_cols=75  Identities=13%  Similarity=0.113  Sum_probs=49.4

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +.++|.|. |.+|...++.++  +..+.++.    .++++.+.++..|.. ++..+....+.+++..=.  +.+.++-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~----~d~~~~~~~~~~~~~-~i~Gd~~~~~~L~~a~i~--~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLA----EDENVRKKVLRSGAN-FVHGDPTRVSDLEKANVR--GARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEE----SCTTHHHHHHHTTCE-EEESCTTSHHHHHHTTCT--TCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEE----cchHHHHHHHhcCcc-ccccccCCHHHHHHhhhh--cCcEEEEec
Confidence            35889998 999998887765  44566665    466777777777764 444444444555554333  478888887


Q ss_pred             CcccH
Q 023007          270 GGNSA  274 (288)
Q Consensus       270 g~~~~  274 (288)
                      .++..
T Consensus        71 ~~d~~   75 (129)
T d2fy8a1          71 ESDSE   75 (129)
T ss_dssp             SSHHH
T ss_pred             cchhh
Confidence            76553

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.18  E-value=0.61  Score=32.75  Aligned_cols=39  Identities=15%  Similarity=0.187  Sum_probs=33.8

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      ..++++++|+|.|+ |.+|+=++..++.+|.+|.++...+
T Consensus        30 ~~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          30 RQLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             HhhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            34667899999999 9999999999999999999998654

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=88.06  E-value=0.22  Score=39.23  Aligned_cols=94  Identities=13%  Similarity=0.038  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EEEeCCcccHHHHHHHhcCCC
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~i~~~~~~~g  260 (288)
                      .+++++||=.|+ | .|..+..+++.-..+++++.    .+++.++.++    ..+.. .+.-...+   .........+
T Consensus        22 ~~~~~~VLDlGC-G-~G~~~~~~~~~~~~~v~GiD----~S~~~l~~A~~r~~~~~~~~~v~f~~~D---~~~~~~~~~~   92 (252)
T d1ri5a_          22 TKRGDSVLDLGC-G-KGGDLLKYERAGIGEYYGVD----IAEVSINDARVRARNMKRRFKVFFRAQD---SYGRHMDLGK   92 (252)
T ss_dssp             CCTTCEEEEETC-T-TTTTHHHHHHHTCSEEEEEE----SCHHHHHHHHHHHHTSCCSSEEEEEESC---TTTSCCCCSS
T ss_pred             CCCcCEEEEecc-c-CcHHHHHHHHcCCCeEEEec----CCHHHHHHHHHHHHhcCCCcceEEEEcc---hhhhcccccc
Confidence            678999999998 2 35556677766445788887    6888877774    33432 22111100   0000001112


Q ss_pred             CccEEEECCCccc-----------HHHHHhhccCCCeeC
Q 023007          261 EPALGFNCVGGNS-----------ASKVLKFLRFREEQW  288 (288)
Q Consensus       261 ~~D~v~d~~g~~~-----------~~~a~~~l~~~G~~v  288 (288)
                      .+|+|+....-..           +..+.+.|+|||+|+
T Consensus        93 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i  131 (252)
T d1ri5a_          93 EFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFI  131 (252)
T ss_dssp             CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEE
T ss_pred             cceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEE
Confidence            4999887544321           244568899999874

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.02  E-value=0.058  Score=41.85  Aligned_cols=92  Identities=9%  Similarity=-0.076  Sum_probs=57.1

Q ss_pred             CCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC----CCCE--EEeCCcccHHHHHHHhcC
Q 023007          185 TLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL----GADE--VFTESQLEVKNVKGLLAN  258 (288)
Q Consensus       185 ~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~----g~~~--v~~~~~~~~~~i~~~~~~  258 (288)
                      ...++.+||=+|+  +.|..+..+++..+.+|+++.    -+++..+.+++.    +...  ++...      +.++...
T Consensus        57 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD----~s~~~l~~ak~~~~~~~~~~~~f~~~d------~~~~~~~  124 (222)
T d2ex4a1          57 NKTGTSCALDCGA--GIGRITKRLLLPLFREVDMVD----ITEDFLVQAKTYLGEEGKRVRNYFCCG------LQDFTPE  124 (222)
T ss_dssp             -CCCCSEEEEETC--TTTHHHHHTTTTTCSEEEEEE----SCHHHHHHHHHHTGGGGGGEEEEEECC------GGGCCCC
T ss_pred             CCCCCCEEEEecc--CCCHhhHHHHHhcCCEEEEee----cCHHHhhcccccccccccccccccccc------ccccccc
Confidence            3567788998888  567777787777777888876    588888877642    2222  22211      1112211


Q ss_pred             CCCccEEEECCC-----cc----cHHHHHhhccCCCeeC
Q 023007          259 LPEPALGFNCVG-----GN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d~~g-----~~----~~~~a~~~l~~~G~~v  288 (288)
                      .+.+|+|+....     .+    .+..+.+.|+|+|.++
T Consensus       125 ~~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~  163 (222)
T d2ex4a1         125 PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIV  163 (222)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             cccccccccccccccchhhhhhhHHHHHHHhcCCcceEE
Confidence            225999887432     22    2366778999999874

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.96  E-value=0.16  Score=36.60  Aligned_cols=77  Identities=10%  Similarity=0.043  Sum_probs=41.6

Q ss_pred             EEeCCCChHHHHHHHHHHHcCCeE-EEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCCc
Q 023007          193 VQNGATSIVGQCIIQIARHRGIHS-INIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVGG  271 (288)
Q Consensus       193 lI~g~~g~vG~~a~~la~~~g~~v-i~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g~  271 (288)
                      -++|+ |.+|...++.++. +..+ .+..    ++.++.+.+.+.+.....+..+.        .+   ..|+||-|+..
T Consensus         3 gfIG~-G~mg~~l~~~L~~-~~~~~~v~~----R~~~~~~~l~~~~~~~~~~~~~~--------~~---~~DiVil~v~d   65 (153)
T d2i76a2           3 NFVGT-GTLTRFFLECLKD-RYEIGYILS----RSIDRARNLAEVYGGKAATLEKH--------PE---LNGVVFVIVPD   65 (153)
T ss_dssp             EEESC-CHHHHHHHHTTC-----CCCEEC----SSHHHHHHHHHHTCCCCCSSCCC--------CC------CEEECSCT
T ss_pred             EEEeC-cHHHHHHHHHHHh-CCCEEEEEe----CChhhhcchhhcccccccchhhh--------hc---cCcEEEEeccc
Confidence            46788 9999988876655 4443 3444    57777776655443322222211        11   26777777776


Q ss_pred             ccHHHHHhhccCCCe
Q 023007          272 NSASKVLKFLRFREE  286 (288)
Q Consensus       272 ~~~~~a~~~l~~~G~  286 (288)
                      ......+..++..|.
T Consensus        66 ~~i~~v~~~l~~~~~   80 (153)
T d2i76a2          66 RYIKTVANHLNLGDA   80 (153)
T ss_dssp             TTHHHHHTTTCCSSC
T ss_pred             hhhhHHHhhhcccce
Confidence            666666666654443

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=87.87  E-value=2.4  Score=34.02  Aligned_cols=58  Identities=31%  Similarity=0.362  Sum_probs=46.6

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~  243 (288)
                      +.+.++++|+...+ |.-|++++..++..|.+.++++... .++.+...++.+|+..+..
T Consensus        56 g~~~~~~~vv~~Ss-GN~g~a~A~~a~~~G~~~~i~~p~~-~~~~k~~~~~~~GA~vv~~  113 (310)
T d1y7la1          56 GTLTKGKEIVDATS-GNTGIALAYVAAARGYKITLTMPET-MSLERKRLLCGLGVNLVLT  113 (310)
T ss_dssp             TSSCTTCEEEESCC-SHHHHHHHHHHHHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCCceeeeecC-CCchHHHHHHHHHhhccccccchhh-hhhhhhhhHHHhCCceEec
Confidence            55677776665554 9999999999999999988887654 5888888999999887653

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=87.81  E-value=0.74  Score=33.35  Aligned_cols=80  Identities=11%  Similarity=-0.053  Sum_probs=49.5

Q ss_pred             eEEEeCCCChHHHH-HHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEEC
Q 023007          191 SIVQNGATSIVGQC-IIQIARH-RGIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNC  268 (288)
Q Consensus       191 ~vlI~g~~g~vG~~-a~~la~~-~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~  268 (288)
                      +|.|+|. |.+|.- .+...+. -+++++++++..  .+...+..++++... +++    .+.+   ..   .+|+|+-|
T Consensus         3 ri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~--~~~~~~~~~~~~~~~-~~~----~~~l---~~---~~D~V~I~   68 (164)
T d1tlta1           3 RIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPT--RAKALPICESWRIPY-ADS----LSSL---AA---SCDAVFVH   68 (164)
T ss_dssp             EEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSS--CTTHHHHHHHHTCCB-CSS----HHHH---HT---TCSEEEEC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEech--hHhhhhhhhcccccc-ccc----chhh---hh---hccccccc
Confidence            5889998 888864 5565554 478888888653  223334556666541 111    2222   22   38999988


Q ss_pred             CCccc-HHHHHhhccCC
Q 023007          269 VGGNS-ASKVLKFLRFR  284 (288)
Q Consensus       269 ~g~~~-~~~a~~~l~~~  284 (288)
                      +.... .+.+..+++.|
T Consensus        69 tp~~~h~~~~~~al~~g   85 (164)
T d1tlta1          69 SSTASHFDVVSTLLNAG   85 (164)
T ss_dssp             SCTTHHHHHHHHHHHTT
T ss_pred             ccchhcccccccccccc
Confidence            87655 47777777655

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=87.76  E-value=0.41  Score=38.79  Aligned_cols=26  Identities=8%  Similarity=0.243  Sum_probs=22.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHS  216 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~v  216 (288)
                      +|||+|++|-+|...+..+...|..|
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v   27 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPD   27 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCc
Confidence            58999999999999999888877643

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=87.66  E-value=0.13  Score=39.85  Aligned_cols=89  Identities=11%  Similarity=0.122  Sum_probs=54.9

Q ss_pred             CCCCCeEEEeCCCChHHHHHHHHHHH---cCCeEEEEEcCCCCCHHHHHHHHh----CCCC---EEEeCCcccHHHHHHH
Q 023007          186 LNSGDSIVQNGATSIVGQCIIQIARH---RGIHSINIIRDRAGSDEAKEKLKG----LGAD---EVFTESQLEVKNVKGL  255 (288)
Q Consensus       186 ~~~g~~vlI~g~~g~vG~~a~~la~~---~g~~vi~~~~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~i~~~  255 (288)
                      ++++.+||=+|+  +.|..+..+++.   .+++++++.    .+++.++.+++    .+..   +..+...      ..+
T Consensus        37 ~~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD----~S~~ml~~A~~~~~~~~~~~~~~~~~~d~------~~~  104 (225)
T d1im8a_          37 VTADSNVYDLGC--SRGAATLSARRNINQPNVKIIGID----NSQPMVERCRQHIAAYHSEIPVEILCNDI------RHV  104 (225)
T ss_dssp             CCTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEEC----SCHHHHHHHHHHHHTSCCSSCEEEECSCT------TTC
T ss_pred             cCCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeC----CCHHHHHHHHHHhHhhcccchhhhccchh------hcc
Confidence            688999999998  456666666664   578999987    68888877753    2322   1121111      111


Q ss_pred             hcCCCCccEEEECCCc---------ccHHHHHhhccCCCeeC
Q 023007          256 LANLPEPALGFNCVGG---------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       256 ~~~~g~~D~v~d~~g~---------~~~~~a~~~l~~~G~~v  288 (288)
                      ...  .+|+++-+..-         ..++.+.+.|+|+|.++
T Consensus       105 ~~~--~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li  144 (225)
T d1im8a_         105 EIK--NASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLV  144 (225)
T ss_dssp             CCC--SEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEE
T ss_pred             ccc--cceeeEEeeeccccChhhHHHHHHHHHHhCCCCceee
Confidence            111  36766554331         12377889999999874

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.56  E-value=0.16  Score=36.78  Aligned_cols=31  Identities=19%  Similarity=0.298  Sum_probs=22.1

Q ss_pred             CeEEEeCCCChHHHHHHHH-HHHcC---CeEEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQI-ARHRG---IHSINII  220 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~l-a~~~g---~~vi~~~  220 (288)
                      ++|.|.||||.+|+-.+++ +.+..   .++....
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~   36 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFS   36 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEee
Confidence            3799999999999999974 54432   3454444

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=87.56  E-value=0.51  Score=37.39  Aligned_cols=75  Identities=12%  Similarity=0.228  Sum_probs=41.7

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC-eEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECCC
Q 023007          192 IVQNGATSIVGQCIIQIARHRGI-HSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCVG  270 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~g  270 (288)
                      |||+|++|-+|...+..+...|. +|+++ +.- .+..+.....+.......+..+. .+.+... .....+++++-+.+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~-d~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVV-DNL-KDGTKFVNLVDLNIADYMDKEDF-LIQIMAG-EEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEE-ECC-SSGGGGHHHHTSCCSEEEEHHHH-HHHHHTT-CCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEE-ECC-CCcchhhcccccchhhhccchHH-HHHHhhh-hcccchhhhhhhcc
Confidence            89999999999998888888897 46555 321 23333334445544444332221 1111111 11123677776654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.36  E-value=0.53  Score=32.36  Aligned_cols=46  Identities=13%  Similarity=0.080  Sum_probs=36.0

Q ss_pred             HHHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          174 LTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       174 ~ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .+++.++..  . +..++++|.|+ |.+|+=.++.+..+|.+|.++.+.+
T Consensus        10 ~~s~~~l~l--~-~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          10 VDSTGALDF--Q-NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             EEHHHHTSC--S-SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EchhHhhCc--c-cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            455655521  2 23488999999 9999999999999999999998654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.13  E-value=0.35  Score=38.67  Aligned_cols=34  Identities=9%  Similarity=0.164  Sum_probs=29.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ++..+|+|+|+ |.-|+.|+..++..|.+|++...
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            45567999999 99999999999999999988863

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=87.03  E-value=0.42  Score=35.81  Aligned_cols=37  Identities=19%  Similarity=0.146  Sum_probs=30.7

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKE  231 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~  231 (288)
                      ++|.|+|+ |.+|...+.++...|++|+...    .+++..+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D----~~~~~l~   41 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKD----INEHGIE   41 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEEC----SSHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEE----CCHHHHh
Confidence            57999999 9999998888888899999887    4565544

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.96  E-value=0.42  Score=33.09  Aligned_cols=33  Identities=18%  Similarity=0.156  Sum_probs=29.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .++++|.|+ |.+|+=.++.++.+|.+|.++.+.
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            468999999 999999999999999999999754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.95  E-value=0.45  Score=32.56  Aligned_cols=34  Identities=12%  Similarity=0.052  Sum_probs=30.2

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      .++++|.|+ |.+|+-+++.++.+|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            378999999 9999999999999999999887643

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=86.76  E-value=1.1  Score=34.21  Aligned_cols=84  Identities=8%  Similarity=0.056  Sum_probs=52.6

Q ss_pred             eEEEeCCCChHHHH-HHHHHHH-cCCeEEEEEcCCCCCHHHHH-HHHhCCCC--EEEeCCcccHHHHHHHhcCCCCccEE
Q 023007          191 SIVQNGATSIVGQC-IIQIARH-RGIHSINIIRDRAGSDEAKE-KLKGLGAD--EVFTESQLEVKNVKGLLANLPEPALG  265 (288)
Q Consensus       191 ~vlI~g~~g~vG~~-a~~la~~-~g~~vi~~~~~~~~~~~~~~-~~~~~g~~--~v~~~~~~~~~~i~~~~~~~g~~D~v  265 (288)
                      +|.|+|+ |.+|.. .+...+. -+++++++++.   ++++.+ +.++++..  .+..+.+     +.++.+.. ++|+|
T Consensus        35 riaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~---~~~~a~~~~~~~~i~~~~~~~~~d-----~~ell~~~-~iD~V  104 (221)
T d1h6da1          35 GYAIVGL-GKYALNQILPGFAGCQHSRIEALVSG---NAEKAKIVAAEYGVDPRKIYDYSN-----FDKIAKDP-KIDAV  104 (221)
T ss_dssp             EEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECS---CHHHHHHHHHHTTCCGGGEECSSS-----GGGGGGCT-TCCEE
T ss_pred             EEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecC---CHHHHHHHHHhhccccccccccCc-----hhhhcccc-cceee
Confidence            7899999 888863 4444343 37899988863   555544 55677753  2222222     22333332 49999


Q ss_pred             EECCCccc-HHHHHhhccCC
Q 023007          266 FNCVGGNS-ASKVLKFLRFR  284 (288)
Q Consensus       266 ~d~~g~~~-~~~a~~~l~~~  284 (288)
                      +-|+.... .+.+.++++.|
T Consensus       105 ~I~tp~~~H~~~~~~al~~g  124 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKAG  124 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHTT
T ss_pred             eeccchhhhhhHHHHhhhcc
Confidence            99888755 47777777665

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=86.60  E-value=0.38  Score=38.72  Aligned_cols=31  Identities=19%  Similarity=0.315  Sum_probs=27.8

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      ++|||+|++|-+|...++.+...|..++++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~   33 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLR   33 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEec
Confidence            5899999999999999999999999887664

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.41  E-value=0.98  Score=35.09  Aligned_cols=41  Identities=12%  Similarity=0.174  Sum_probs=32.3

Q ss_pred             HHhhcCCCCCCeEEEeCCCChHHHHHHHHH-HHcCCeEEEEEc
Q 023007          180 LEDFTTLNSGDSIVQNGATSIVGQCIIQIA-RHRGIHSINIIR  221 (288)
Q Consensus       180 l~~~~~~~~g~~vlI~g~~g~vG~~a~~la-~~~g~~vi~~~~  221 (288)
                      +.....--+|++|+|.|- |.||..+++.+ +..|++++.+.+
T Consensus        22 ~~~~~~~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          22 MDVLGIDPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             HHHTTCCTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHcCCCcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeec
Confidence            333333346899999999 99999999887 578999998874

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.37  E-value=0.58  Score=32.30  Aligned_cols=33  Identities=12%  Similarity=0.107  Sum_probs=30.0

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .++++|+|+ |.+|+=.++.+..+|.+|.++.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~   55 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQ   55 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEec
Confidence            379999999 999999999999999999999754

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=86.31  E-value=0.32  Score=35.74  Aligned_cols=29  Identities=14%  Similarity=0.193  Sum_probs=26.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      -|+|+|+ |+.|+.|+..+.+.|.+++++.
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie   31 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMG   31 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEEC
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEE
Confidence            3789999 9999999999999999999886

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.28  E-value=0.16  Score=37.74  Aligned_cols=34  Identities=15%  Similarity=0.214  Sum_probs=29.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      -.|++++|.|-+..+|.=.+.++...|++|+.+-
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~   60 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVD   60 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEEC
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEec
Confidence            5689999999989999988888888999997654

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=86.21  E-value=0.16  Score=37.99  Aligned_cols=33  Identities=12%  Similarity=0.147  Sum_probs=29.3

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      ++..|+|+|+ |+.|+.|+..+.+.|.+|+++.+
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~   36 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITG   36 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEe
Confidence            4567999999 99999999999999999988853

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=85.93  E-value=2.4  Score=33.96  Aligned_cols=51  Identities=20%  Similarity=0.136  Sum_probs=42.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEEe
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVFT  243 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~  243 (288)
                      .++...+|..|.+++..++.+|.+.++++... .++++.+.++.+|++-+..
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~-~~~~k~~~l~~~Ga~vi~~  121 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLD-APEAKVAATKGYGGQVIMY  121 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCEEEEEETT-CCHHHHHHHHHTTCEEEEE
T ss_pred             eeeeeccchhhHHHHHhhcccccceeeccccc-ccHHHHHHHHHcCCcEEec
Confidence            46667779999999999999999988887665 4888889999999986653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=85.89  E-value=0.43  Score=36.22  Aligned_cols=33  Identities=18%  Similarity=0.231  Sum_probs=30.4

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|++|.|+|. |.+|...++.++.+|++|++...
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~   76 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDP   76 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCC
Confidence            4689999999 99999999999999999998864

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=85.78  E-value=0.66  Score=34.01  Aligned_cols=79  Identities=13%  Similarity=0.185  Sum_probs=49.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCCCccEEEECC
Q 023007          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLPEPALGFNCV  269 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D~v~d~~  269 (288)
                      +|.|+|. |.+|...+...+.. +++++++++...   ++      .....+..+.+.     ..+.+   .+|+|+.|+
T Consensus         5 rvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~---~~------~~~~~~~~~~~~-----~~~~~---~~D~Vvi~t   66 (170)
T d1f06a1           5 RVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRA---TL------DTKTPVFDVADV-----DKHAD---DVDVLFLCM   66 (170)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSS---CC------SSSSCEEEGGGG-----GGTTT---TCSEEEECS
T ss_pred             eEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccc---cc------ccccccccchhh-----hhhcc---ccceEEEeC
Confidence            6899998 99998888777764 678888875422   11      111112222111     11112   389999988


Q ss_pred             Cccc-HHHHHhhccCCCee
Q 023007          270 GGNS-ASKVLKFLRFREEQ  287 (288)
Q Consensus       270 g~~~-~~~a~~~l~~~G~~  287 (288)
                      +... .+.+.++|+.|-.+
T Consensus        67 p~~~h~~~a~~aL~aG~~v   85 (170)
T d1f06a1          67 GSATDIPEQAPKFAQFACT   85 (170)
T ss_dssp             CTTTHHHHHHHHHTTTSEE
T ss_pred             CCcccHHHHHHHHHCCCcE
Confidence            8765 48888888877553

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=85.77  E-value=0.42  Score=38.93  Aligned_cols=32  Identities=22%  Similarity=0.212  Sum_probs=28.9

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .++|+|+|| |..|+.++..+...|.+|+++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk   33 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQ   33 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEES
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEEC
Confidence            578999999 99999999999988999998874

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=85.53  E-value=0.63  Score=37.92  Aligned_cols=93  Identities=10%  Similarity=0.026  Sum_probs=52.1

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC-CC-CEEEeCC------cccHHHHHHHhcCC
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-GA-DEVFTES------QLEVKNVKGLLANL  259 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-g~-~~v~~~~------~~~~~~i~~~~~~~  259 (288)
                      ..++|||+|+  +-|..+-.++++.+...+.+++   -+++-.+.++++ .. ...++..      .+..+.+++ ++. 
T Consensus       106 ~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VE---ID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~-~~~-  178 (312)
T d2b2ca1         106 DPKRVLIIGG--GDGGILREVLKHESVEKVTMCE---IDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKN-  178 (312)
T ss_dssp             SCCEEEEESC--TTSHHHHHHTTCTTCCEEEEEC---SCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTT-
T ss_pred             CCCeEEEeCC--CchHHHHHHHHcCCcceEEEEc---ccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh-CCC-
Confidence            3478999998  3355566777777765555554   467777777653 21 0011111      111233433 333 


Q ss_pred             CCccEEEECCC-----------cccHHHHHhhccCCCeeC
Q 023007          260 PEPALGFNCVG-----------GNSASKVLKFLRFREEQW  288 (288)
Q Consensus       260 g~~D~v~d~~g-----------~~~~~~a~~~l~~~G~~v  288 (288)
                       ++|+||--..           .+.++.+.++|+++|.+|
T Consensus       179 -~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v  217 (312)
T d2b2ca1         179 -EFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILS  217 (312)
T ss_dssp             -CEEEEEECCC-------------HHHHHHHHEEEEEEEE
T ss_pred             -CCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEE
Confidence             5998774221           122367788999999875

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.43  E-value=0.35  Score=38.44  Aligned_cols=30  Identities=23%  Similarity=0.315  Sum_probs=27.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .|+|.|+ |..|++++..++..|.+|+++.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~   33 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILER   33 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeC
Confidence            5999999 99999999999999999999975

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.42  E-value=1.2  Score=34.48  Aligned_cols=30  Identities=23%  Similarity=0.241  Sum_probs=26.0

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCC-eEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGI-HSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~~  221 (288)
                      .|+|.|+ |..|++++.+++..|. +|.++.+
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er   33 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLES   33 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEES
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeC
Confidence            5899999 9999999999999997 6666654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=85.06  E-value=1.7  Score=30.87  Aligned_cols=30  Identities=20%  Similarity=0.271  Sum_probs=25.8

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +|.|+|. |.+|...+.-+...|.+++...+
T Consensus         2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~   31 (152)
T d1i36a2           2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLE   31 (152)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEECCT
T ss_pred             EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcC
Confidence            4788999 99999999999999999877654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.01  E-value=0.67  Score=31.48  Aligned_cols=33  Identities=15%  Similarity=0.118  Sum_probs=29.6

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      .++++|.|+ |.+|+-+++.++.+|.+|.++.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~   53 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEAR   53 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeee
Confidence            379999999 999999999999999999988754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=84.83  E-value=0.7  Score=32.08  Aligned_cols=36  Identities=11%  Similarity=0.039  Sum_probs=31.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      +..++++|.|+ |.+|+=.++..+.+|.+|.++.+.+
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            34589999999 9999999999999999999997543

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=84.77  E-value=1  Score=35.15  Aligned_cols=99  Identities=12%  Similarity=0.027  Sum_probs=53.6

Q ss_pred             hhcCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHhCCCCEEEeCCcccHHHHHHHhcCCC
Q 023007          182 DFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKLKGLGADEVFTESQLEVKNVKGLLANLP  260 (288)
Q Consensus       182 ~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g  260 (288)
                      ....+.+.++||=+|+  +.|..++.+++.. +.+++++. .+..-+...+.+.+.+...-+.....+   +.+....  
T Consensus        74 ~~~d~~~~~~VLDvGc--G~G~~~~~la~~~p~~~~~~~D-~~~~~~~a~~~~~~~~~~~rv~~~~~D---~~~~~~~--  145 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGG--GKGGFAAAIARRAPHVSATVLE-MAGTVDTARSYLKDEGLSDRVDVVEGD---FFEPLPR--  145 (253)
T ss_dssp             HHSCCTTCSEEEEETC--TTSHHHHHHHHHCTTCEEEEEE-CTTHHHHHHHHHHHTTCTTTEEEEECC---TTSCCSS--
T ss_pred             hhcCCccCCEEEEeCC--CCCHHHHHHHHhcceeEEEEcc-CHHHHHHHHHHHHHhhcccchhhcccc---chhhccc--
Confidence            3345677789998887  5678888899887 45666654 211112222333444432111111111   0011111  


Q ss_pred             CccEEEECCC-----cc----cHHHHHhhccCCCeeC
Q 023007          261 EPALGFNCVG-----GN----SASKVLKFLRFREEQW  288 (288)
Q Consensus       261 ~~D~v~d~~g-----~~----~~~~a~~~l~~~G~~v  288 (288)
                      ++|+|+-..-     .+    .++.+.+.|+|||+++
T Consensus       146 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~  182 (253)
T d1tw3a2         146 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRIL  182 (253)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEE
T ss_pred             chhheeeccccccCCchhhHHHHHHHHHhcCCCcEEE
Confidence            4898875432     12    1367788999999874

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=84.77  E-value=0.5  Score=37.81  Aligned_cols=91  Identities=14%  Similarity=0.133  Sum_probs=52.5

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhC-----CC-C----EEEeCCcccHHHHHHHhc
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGL-----GA-D----EVFTESQLEVKNVKGLLA  257 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~-----g~-~----~v~~~~~~~~~~i~~~~~  257 (288)
                      ..++|||+|+  +-|..+..+++..+.+.+.+++   -+++-.+.++++     +. +    .++..+  ..+.++. ++
T Consensus        75 ~p~~vLiiGg--G~G~~~~~~l~~~~~~~i~~VE---ID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D--~~~~l~~-~~  146 (274)
T d1iy9a_          75 NPEHVLVVGG--GDGGVIREILKHPSVKKATLVD---IDGKVIEYSKKFLPSIAGKLDDPRVDVQVDD--GFMHIAK-SE  146 (274)
T ss_dssp             SCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEE---SCHHHHHHHHHHCHHHHTTTTSTTEEEEESC--SHHHHHT-CC
T ss_pred             CcceEEecCC--CCcHHHHHHHhcCCcceEEEec---CCHHHHHHHHHhChhhcccccCCCeEEEech--HHHHHhh-cC
Confidence            4479999988  3456667777777765554444   467777766542     11 1    122111  1223332 23


Q ss_pred             CCCCccEEEE-CCC---------c-ccHHHHHhhccCCCeeC
Q 023007          258 NLPEPALGFN-CVG---------G-NSASKVLKFLRFREEQW  288 (288)
Q Consensus       258 ~~g~~D~v~d-~~g---------~-~~~~~a~~~l~~~G~~v  288 (288)
                      .  ++|+|+- ...         + +.++.+.++|+++|.||
T Consensus       147 ~--~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v  186 (274)
T d1iy9a_         147 N--QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFV  186 (274)
T ss_dssp             S--CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEE
T ss_pred             C--CCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEE
Confidence            3  5998763 321         1 22478889999999875

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=84.75  E-value=1.5  Score=35.72  Aligned_cols=95  Identities=8%  Similarity=-0.052  Sum_probs=49.8

Q ss_pred             cCCCCCCeEEEeCC-CChHHHHHHHHHHHcCCe-EEEEEcCCCCCHHHHHHHH------hCCCC--EEEeCCcccHHHHH
Q 023007          184 TTLNSGDSIVQNGA-TSIVGQCIIQIARHRGIH-SINIIRDRAGSDEAKEKLK------GLGAD--EVFTESQLEVKNVK  253 (288)
Q Consensus       184 ~~~~~g~~vlI~g~-~g~vG~~a~~la~~~g~~-vi~~~~~~~~~~~~~~~~~------~~g~~--~v~~~~~~~~~~i~  253 (288)
                      ..+.+|++||=..+ +|++++   ..+ ..|++ |+.+.    .++...+.++      .++.+  .++..+.  .+.+.
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl---~aa-~~ga~~V~~vD----~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~--~~~l~  209 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSV---AAA-MGGAMATTSVD----LAKRSRALSLAHFEANHLDMANHQLVVMDV--FDYFK  209 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHH---HHH-HTTBSEEEEEE----SCTTHHHHHHHHHHHTTCCCTTEEEEESCH--HHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHH---HHH-hCCCceEEEec----CCHHHHHHHHHHHHHhcccCcceEEEEccH--HHHHH
Confidence            46788999985544 455554   333 35775 55554    4555555553      23322  1222222  23333


Q ss_pred             HHhcCCCCccEEEEC-C--C-c------------ccHHHHHhhccCCCeeC
Q 023007          254 GLLANLPEPALGFNC-V--G-G------------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       254 ~~~~~~g~~D~v~d~-~--g-~------------~~~~~a~~~l~~~G~~v  288 (288)
                      .+.....++|+||-- -  + +            +....++++|+|||.++
T Consensus       210 ~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~  260 (317)
T d2b78a2         210 YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLII  260 (317)
T ss_dssp             HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred             HHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            332221249987631 1  1 0            12367889999999874

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=84.63  E-value=0.2  Score=36.32  Aligned_cols=30  Identities=20%  Similarity=0.216  Sum_probs=21.7

Q ss_pred             eEEEeCCCChHHHHHHHHHHH-c---CCeEEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARH-R---GIHSINII  220 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~-~---g~~vi~~~  220 (288)
                      +|.|.|++|-+|+-.++++.. .   ..++....
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~s   35 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFS   35 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEec
Confidence            589999999999999986543 2   24555444

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.59  E-value=0.65  Score=32.05  Aligned_cols=36  Identities=14%  Similarity=0.065  Sum_probs=31.4

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      +..++++|.|+ |.+|+=.++.+..+|.+|.++.+.+
T Consensus        23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            34579999999 9999999999999999999987643

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.46  E-value=0.68  Score=32.03  Aligned_cols=33  Identities=21%  Similarity=0.193  Sum_probs=30.3

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCC
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR  223 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~  223 (288)
                      ++++|.|+ |.+|+=.+..++.+|.+|.++.+.+
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            78999999 9999999999999999999998653

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.25  E-value=0.29  Score=37.71  Aligned_cols=99  Identities=13%  Similarity=0.051  Sum_probs=54.4

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHc--CCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcc-cHHHHHHHh
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHR--GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQL-EVKNVKGLL  256 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~-~~~~i~~~~  256 (288)
                      .+..+.++||=+|.  ..|..++.+|+.+  +.+++.+.    .+++..+.+    +..|...-+.-... ..+.+.++.
T Consensus        52 v~~~kpk~ILEiGt--~~G~Sti~la~al~~~g~v~sid----~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~  125 (214)
T d2cl5a1          52 IREYSPSLVLELGA--YCGYSAVRMARLLQPGARLLTME----MNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLK  125 (214)
T ss_dssp             HHHHCCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEE----SCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHH
T ss_pred             HHhhCCCEEEEEcc--CchhHHHHHHHhCCCccEEEEEe----ccHHHHHHHHHHHHHcCCCccceeeeccccccccchh
Confidence            33444579999987  4566777788765  56888777    466665544    45565321111111 122233322


Q ss_pred             c--CCCCccEEE-ECCCccc-----HHHHHhhccCCCeeC
Q 023007          257 A--NLPEPALGF-NCVGGNS-----ASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~--~~g~~D~v~-d~~g~~~-----~~~a~~~l~~~G~~v  288 (288)
                      .  ..+.+|++| |......     +..++++|+|||.+|
T Consensus       126 ~~~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv  165 (214)
T d2cl5a1         126 KKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL  165 (214)
T ss_dssp             HHSCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             hcccccccceeeecccccccccHHHHHHHhCccCCCcEEE
Confidence            1  122489766 4333221     244567899999764

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=84.19  E-value=3.1  Score=30.31  Aligned_cols=91  Identities=11%  Similarity=0.070  Sum_probs=55.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC-------CCEE-------EeCCcccH---HHHH
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG-------ADEV-------FTESQLEV---KNVK  253 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g-------~~~v-------~~~~~~~~---~~i~  253 (288)
                      +|.|.|= |-+|.++.+.+...+.+++.+-+.. .+.+.+.++-+..       .+--       ++.+.-.+   ....
T Consensus         2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~-~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~   79 (169)
T d1dssg1           2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPF-IALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE   79 (169)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTT-SCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCC-cCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH
Confidence            5788888 9999999999988899888887532 3566666664332       1111       11110000   0011


Q ss_pred             HH-hcCCCCccEEEECCCcccH-HHHHhhccCC
Q 023007          254 GL-LANLPEPALGFNCVGGNSA-SKVLKFLRFR  284 (288)
Q Consensus       254 ~~-~~~~g~~D~v~d~~g~~~~-~~a~~~l~~~  284 (288)
                      ++ .+.. ++|+|+||+|-... +.+...+..+
T Consensus        80 ~i~W~~~-gvD~ViEcTG~f~~~~~~~~hl~~g  111 (169)
T d1dssg1          80 NIPWSKA-GAEYIVESTGVFTTIEKASAHFKGG  111 (169)
T ss_dssp             GCCHHHH-TCCEEEECSSSCCSHHHHGGGGTTT
T ss_pred             HCCcccc-CCCEEEecCceEcCHHHHHHHHhcC
Confidence            10 0111 39999999998665 6777777654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=84.06  E-value=1.3  Score=31.60  Aligned_cols=47  Identities=11%  Similarity=0.111  Sum_probs=38.4

Q ss_pred             hHHHHHHHHhhcCCCCCCeEEEe--CCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          173 PLTALRMLEDFTTLNSGDSIVQN--GATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       173 ~~ta~~~l~~~~~~~~g~~vlI~--g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      ..|.+..+.  .+..+++.++|+  |+ |-+|+-+++.+...|.+|.++...
T Consensus        25 v~t~~d~l~--~~~~~~~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~   73 (156)
T d1djqa2          25 QLTPEQVMD--GKKKIGKRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGV   73 (156)
T ss_dssp             EECHHHHHH--TCSCCCSEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EECHHHHhc--CccccCCceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecC
Confidence            346777664  567788888887  55 889999999999999999999854

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.02  E-value=0.86  Score=36.58  Aligned_cols=92  Identities=8%  Similarity=0.021  Sum_probs=51.3

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCC---------CC-EEEeCCcccHHHHHHHh
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLG---------AD-EVFTESQLEVKNVKGLL  256 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g---------~~-~v~~~~~~~~~~i~~~~  256 (288)
                      ...++|||+|+  +-|..+-.+++..+...+.+++   -+++-.+.+++.-         .. .++..+  ..+.++. +
T Consensus        77 ~~pk~vLiiGg--G~G~~~~~~l~~~~~~~v~~vE---iD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~D--a~~~l~~-~  148 (285)
T d2o07a1          77 PNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCE---IDEDVIQVSKKFLPGMAIGYSSSKLTLHVGD--GFEFMKQ-N  148 (285)
T ss_dssp             SSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEE---SCHHHHHHHHHHCHHHHGGGGCTTEEEEESC--HHHHHHT-C
T ss_pred             cCcCeEEEeCC--CchHHHHHHHHcCCcceeeecc---CCHHHHHHHHhhchhhccccCCCCceEEEcc--HHHHHhc-C
Confidence            34489999988  3355566677776665555554   3677777665421         11 111111  1123332 3


Q ss_pred             cCCCCccEEE-ECCC---------c-ccHHHHHhhccCCCeeC
Q 023007          257 ANLPEPALGF-NCVG---------G-NSASKVLKFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~-d~~g---------~-~~~~~a~~~l~~~G~~v  288 (288)
                      ++  ++|+|| |...         . +.++.+.++|+++|.++
T Consensus       149 ~~--~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v  189 (285)
T d2o07a1         149 QD--AFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLC  189 (285)
T ss_dssp             SS--CEEEEEEECC-----------CHHHHHHHHHEEEEEEEE
T ss_pred             CC--CCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEE
Confidence            33  599866 4322         1 23477788999999875

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=83.96  E-value=0.67  Score=33.45  Aligned_cols=32  Identities=16%  Similarity=0.138  Sum_probs=26.6

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCC--eEEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGI--HSINII  220 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~--~vi~~~  220 (288)
                      .|++|+|.|+ |..|+.++..++..+.  +++++.
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie   34 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIE   34 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEE
Confidence            4789999999 9999999888888874  666654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=83.84  E-value=0.078  Score=39.26  Aligned_cols=31  Identities=23%  Similarity=0.284  Sum_probs=25.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHc-CCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHR-GIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~  221 (288)
                      +|.|.|++|-+|+..++++... ++++....+
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~   37 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALE   37 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            6899999999999999988765 667766663

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=83.63  E-value=0.76  Score=36.06  Aligned_cols=96  Identities=9%  Similarity=-0.125  Sum_probs=58.3

Q ss_pred             cCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHh-CCCCEEEeCCcccHHHHHHHhcCCCCc
Q 023007          184 TTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKG-LGADEVFTESQLEVKNVKGLLANLPEP  262 (288)
Q Consensus       184 ~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~i~~~~~~~g~~  262 (288)
                      ....++.+||=.|+  +.|..+..++.....+|+++.    .+++..+.+++ +.....++....+   +..+.-..+.+
T Consensus        89 l~~~~~~~vLD~Gc--G~G~~t~~ll~~~~~~v~~vD----~s~~~l~~a~~~~~~~~~~~~~~~d---~~~~~~~~~~f  159 (254)
T d1xtpa_          89 LPGHGTSRALDCGA--GIGRITKNLLTKLYATTDLLE----PVKHMLEEAKRELAGMPVGKFILAS---METATLPPNTY  159 (254)
T ss_dssp             STTCCCSEEEEETC--TTTHHHHHTHHHHCSEEEEEE----SCHHHHHHHHHHTTTSSEEEEEESC---GGGCCCCSSCE
T ss_pred             CCCCCCCeEEEecc--cCChhhHHHHhhcCceEEEEc----CCHHHHHhhhccccccccceeEEcc---ccccccCCCcc
Confidence            44566778888887  568888888877677888886    58888888864 3322122211111   11222122259


Q ss_pred             cEEEECCCc-----c----cHHHHHhhccCCCeeC
Q 023007          263 ALGFNCVGG-----N----SASKVLKFLRFREEQW  288 (288)
Q Consensus       263 D~v~d~~g~-----~----~~~~a~~~l~~~G~~v  288 (288)
                      |+|+..-.-     +    .+..+.+.|+|+|.++
T Consensus       160 D~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~ii  194 (254)
T d1xtpa_         160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIF  194 (254)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             ceEEeeccccccchhhhHHHHHHHHHhcCCCcEEE
Confidence            998875432     1    1366778899999874

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=83.33  E-value=0.52  Score=35.65  Aligned_cols=30  Identities=20%  Similarity=0.172  Sum_probs=27.2

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      -|+|+|+ |+.|+.++..+..+|.+|+++..
T Consensus         5 DvvVIGg-GpaGl~aA~~aa~~G~kV~vie~   34 (221)
T d1dxla1           5 DVVIIGG-GPGGYVAAIKAAQLGFKTTCIEK   34 (221)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEe
Confidence            3789999 99999999999999999999974

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.03  E-value=0.67  Score=33.81  Aligned_cols=32  Identities=19%  Similarity=0.212  Sum_probs=27.2

Q ss_pred             CCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          188 SGDSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       188 ~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      .+++|+|.|+ |.+|+-++..++.+|.++.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            5689999999 9999999999999998765543

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=82.97  E-value=0.68  Score=35.43  Aligned_cols=96  Identities=13%  Similarity=0.070  Sum_probs=56.7

Q ss_pred             HHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCC--EEEeCCcccHHHHHHHh
Q 023007          179 MLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGAD--EVFTESQLEVKNVKGLL  256 (288)
Q Consensus       179 ~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~i~~~~  256 (288)
                      .++......++++||=+|+  +.|..+..+++ .|.+|+++.    -+++..+.+++-..+  .++......   + .. 
T Consensus        11 ~~~~~~~~~~~~~VLDiGc--G~G~~~~~l~~-~g~~v~giD----~s~~~i~~a~~~~~~~~~~~~~~~~~---~-~~-   78 (225)
T d2p7ia1          11 MVRAFTPFFRPGNLLELGS--FKGDFTSRLQE-HFNDITCVE----ASEEAISHAQGRLKDGITYIHSRFED---A-QL-   78 (225)
T ss_dssp             HHHHHGGGCCSSCEEEESC--TTSHHHHHHTT-TCSCEEEEE----SCHHHHHHHHHHSCSCEEEEESCGGG---C-CC-
T ss_pred             HHHHhhhhCCCCcEEEEeC--CCcHHHHHHHH-cCCeEEEEe----CcHHHhhhhhcccccccccccccccc---c-cc-
Confidence            3444455566789998888  44666666654 488998887    688888888743222  222222111   1 11 


Q ss_pred             cCCCCccEEEECCCcc-----c--HHHHH-hhccCCCeeC
Q 023007          257 ANLPEPALGFNCVGGN-----S--ASKVL-KFLRFREEQW  288 (288)
Q Consensus       257 ~~~g~~D~v~d~~g~~-----~--~~~a~-~~l~~~G~~v  288 (288)
                      .+  ++|+|+-.---+     .  +.... ++|+|+|.++
T Consensus        79 ~~--~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~  116 (225)
T d2p7ia1          79 PR--RYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLF  116 (225)
T ss_dssp             SS--CEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEE
T ss_pred             cc--ccccccccceeEecCCHHHHHHHHHHHhcCCCceEE
Confidence            22  599988543211     1  23444 6899999874

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=82.80  E-value=0.9  Score=35.10  Aligned_cols=88  Identities=13%  Similarity=0.024  Sum_probs=53.6

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EEEeCCcccHHHHHHHhcCCCC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQLEVKNVKGLLANLPE  261 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~i~~~~~~~g~  261 (288)
                      .++++||=+|+  +.|..+..+++ .|.+++++.    .+++.++.++    ..+.. .++..+      +..+... ++
T Consensus        36 ~~~~~vLDiGC--G~G~~~~~l~~-~g~~v~GvD----~S~~ml~~A~~~~~~~~~~v~~~~~d------~~~~~~~-~~  101 (246)
T d1y8ca_          36 LVFDDYLDLAC--GTGNLTENLCP-KFKNTWAVD----LSQEMLSEAENKFRSQGLKPRLACQD------ISNLNIN-RK  101 (246)
T ss_dssp             CCTTEEEEETC--TTSTTHHHHGG-GSSEEEEEC----SCHHHHHHHHHHHHHTTCCCEEECCC------GGGCCCS-CC
T ss_pred             CCCCeEEEEeC--cCCHHHHHHHH-hCCccEeec----cchhhhhhccccccccCccceeeccc------hhhhccc-cc
Confidence            44579999998  35566666665 488998886    6888777664    33432 223221      1122112 25


Q ss_pred             ccEEEECCCc-----------ccHHHHHhhccCCCeeC
Q 023007          262 PALGFNCVGG-----------NSASKVLKFLRFREEQW  288 (288)
Q Consensus       262 ~D~v~d~~g~-----------~~~~~a~~~l~~~G~~v  288 (288)
                      +|+|+...+.           ..++.+.++|+|+|.|+
T Consensus       102 fD~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i  139 (246)
T d1y8ca_         102 FDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFI  139 (246)
T ss_dssp             EEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred             ccccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEE
Confidence            9999864332           12367788999999874

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.58  E-value=2.8  Score=33.28  Aligned_cols=49  Identities=29%  Similarity=0.344  Sum_probs=40.6

Q ss_pred             EEeCCCChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHhCCCCEEE
Q 023007          193 VQNGATSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLKGLGADEVF  242 (288)
Q Consensus       193 lI~g~~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~~~g~~~v~  242 (288)
                      +|...+|..|++++..++.+|.+.++++... .++.+.+.++.+|++-+.
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~-~~~~k~~~~~~~GA~V~~  106 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPET-MSVERRKVLKMLGAELVL  106 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETT-SCHHHHHHHHHTTCEEEE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeecccc-ccHHHeeccccCCcEEEE
Confidence            5566669999999999999999888887654 478889999999997554

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=82.40  E-value=0.64  Score=35.85  Aligned_cols=30  Identities=13%  Similarity=0.137  Sum_probs=26.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      |+|+|+ |..|+.++..+...|.+|+++.+.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~   34 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKG   34 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            889999 999999888888889999999754

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.17  E-value=0.66  Score=35.00  Aligned_cols=31  Identities=13%  Similarity=0.222  Sum_probs=27.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      -|+|+|+ |..|+.++..+...|.+|.++.+.
T Consensus         7 DviViGa-G~~Gl~~A~~La~~G~~V~vlE~~   37 (297)
T d2bcgg1           7 DVIVLGT-GITECILSGLLSVDGKKVLHIDKQ   37 (297)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEcCC
Confidence            3889999 999999998888999999998753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=81.89  E-value=0.53  Score=36.81  Aligned_cols=30  Identities=20%  Similarity=0.370  Sum_probs=27.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      +|+|+|+ |..|+.++..++..|.+|+++.+
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~   31 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLES   31 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEec
Confidence            4899999 99999999999999999988864

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=81.73  E-value=0.62  Score=35.45  Aligned_cols=29  Identities=17%  Similarity=0.265  Sum_probs=25.5

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCC-eEEEEE
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGI-HSINII  220 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~-~vi~~~  220 (288)
                      .|+|+|+ |..|+.++..++..|. +|+++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE   31 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILE   31 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEEC
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEE
Confidence            4999999 9999999999999997 587776

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=81.58  E-value=1.6  Score=33.67  Aligned_cols=85  Identities=9%  Similarity=0.007  Sum_probs=49.1

Q ss_pred             CeEEEeCCCCh---HHHHHHHHHHHc--CCeEEEEEcCCCCCHHHH-HHHHhCCCCEEEeCCcccHHHHHHHhcCCCCcc
Q 023007          190 DSIVQNGATSI---VGQCIIQIARHR--GIHSINIIRDRAGSDEAK-EKLKGLGADEVFTESQLEVKNVKGLLANLPEPA  263 (288)
Q Consensus       190 ~~vlI~g~~g~---vG~~a~~la~~~--g~~vi~~~~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~i~~~~~~~g~~D  263 (288)
                      =+|.|+|.++.   ++...+...+..  +++++++++.   +.++. +..++++......+.+  .+.+   .... .+|
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~---~~~~~~~~~~~~~~~~~~~~~~--~~~l---~~~~-~iD   87 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP---TLKSSLQTIEQLQLKHATGFDS--LESF---AQYK-DID   87 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS---CHHHHHHHHHHTTCTTCEEESC--HHHH---HHCT-TCS
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcC---CHHHHHHHHHhcccccceeecc--hhhc---cccc-ccc
Confidence            37899998331   444445555543  5788888863   45444 4567777543222222  2232   2222 499


Q ss_pred             EEEECCCcccH-HHHHhhccC
Q 023007          264 LGFNCVGGNSA-SKVLKFLRF  283 (288)
Q Consensus       264 ~v~d~~g~~~~-~~a~~~l~~  283 (288)
                      +|+.|+....- +.+..+|..
T Consensus        88 ~V~i~tp~~~h~~~~~~al~a  108 (237)
T d2nvwa1          88 MIVVSVKVPEHYEVVKNILEH  108 (237)
T ss_dssp             EEEECSCHHHHHHHHHHHHHH
T ss_pred             eeeccCCCcchhhHHHHHHHh
Confidence            99999987553 666666654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=81.54  E-value=0.43  Score=34.55  Aligned_cols=26  Identities=27%  Similarity=0.448  Sum_probs=22.8

Q ss_pred             CCeEEEeCCCChHHHHHHHHHHHcCC
Q 023007          189 GDSIVQNGATSIVGQCIIQIARHRGI  214 (288)
Q Consensus       189 g~~vlI~g~~g~vG~~a~~la~~~g~  214 (288)
                      |-+|.|.|++|-+|.-.++++..+..
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCC
Confidence            45799999999999999999988753

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.49  E-value=0.25  Score=35.58  Aligned_cols=31  Identities=19%  Similarity=0.251  Sum_probs=24.5

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcC---CeEEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRG---IHSINII  220 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g---~~vi~~~  220 (288)
                      =+|.|.|++|-+|+-.++++..++   .++..+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~   36 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   36 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEe
Confidence            369999999999999999997543   4666555

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=81.42  E-value=4.7  Score=30.17  Aligned_cols=102  Identities=13%  Similarity=-0.010  Sum_probs=58.7

Q ss_pred             HHHHHHHhhcCCCCCCeEEEeCCCChHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHH----HhCCCCEEEeCCcccH
Q 023007          175 TALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHR-GIHSINIIRDRAGSDEAKEKL----KGLGADEVFTESQLEV  249 (288)
Q Consensus       175 ta~~~l~~~~~~~~g~~vlI~g~~g~vG~~a~~la~~~-g~~vi~~~~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~  249 (288)
                      .-|..++.  +  ++..||=+|+  +.|..++.+|+.. +..++++.    .++.....+    ++.+.+.+.-...+. 
T Consensus        20 ~~w~~~F~--~--~~PlvLeIGc--G~G~~~~~lA~~~p~~~~iGiD----~~~~~i~~a~~~~~~~~l~Nv~~~~~Da-   88 (204)
T d2fcaa1          20 GKWNTVFG--N--DNPIHIEVGT--GKGQFISGMAKQNPDINYIGIE----LFKSVIVTAVQKVKDSEAQNVKLLNIDA-   88 (204)
T ss_dssp             TCHHHHHT--S--CCCEEEEECC--TTSHHHHHHHHHCTTSEEEEEC----SCHHHHHHHHHHHHHSCCSSEEEECCCG-
T ss_pred             hHHHHHcC--C--CCceEEEEEe--cCcHHHHHHHHhCCCCcEEEee----cchHHHHHHHHHHHHHhccCchhcccch-
Confidence            34666653  2  2334566666  6788888899876 46777775    466665443    466765442222221 


Q ss_pred             HHHHHHhcCCCCccEEEECCCcc---------------cHHHHHhhccCCCeeC
Q 023007          250 KNVKGLLANLPEPALGFNCVGGN---------------SASKVLKFLRFREEQW  288 (288)
Q Consensus       250 ~~i~~~~~~~g~~D~v~d~~g~~---------------~~~~a~~~l~~~G~~v  288 (288)
                      ..+....... .+|.|+-....+               .+....+.|+|||.|+
T Consensus        89 ~~l~~~~~~~-~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~  141 (204)
T d2fcaa1          89 DTLTDVFEPG-EVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIH  141 (204)
T ss_dssp             GGHHHHCCTT-SCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEE
T ss_pred             hhhhcccCch-hhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEE
Confidence            1222322221 488766554332               3377889999999873

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.41  E-value=0.67  Score=34.46  Aligned_cols=30  Identities=7%  Similarity=0.047  Sum_probs=27.1

Q ss_pred             CeEEEeCCCChHHHHHHHHHHHcCCeEEEEE
Q 023007          190 DSIVQNGATSIVGQCIIQIARHRGIHSINII  220 (288)
Q Consensus       190 ~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~  220 (288)
                      ..|+|.|+ |+.|+.++..+.+.|.+++++.
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie   35 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFE   35 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEEC
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Confidence            57999999 9999999999999999998875

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=81.35  E-value=4.1  Score=29.50  Aligned_cols=94  Identities=14%  Similarity=0.055  Sum_probs=49.8

Q ss_pred             CCCCCCeEEEeCC-CChHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH----hCCCC-EEEeCCcccHHHHHHHhcC
Q 023007          185 TLNSGDSIVQNGA-TSIVGQCIIQIARHRGIHSINIIRDRAGSDEAKEKLK----GLGAD-EVFTESQLEVKNVKGLLAN  258 (288)
Q Consensus       185 ~~~~g~~vlI~g~-~g~vG~~a~~la~~~g~~vi~~~~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~i~~~~~~  258 (288)
                      .+.+|.+||=.++ +|.+|   +..+ ..|++++.+.    .+++..+.++    .++.. .+...+...........+.
T Consensus        38 ~~~~g~~vLDl~~G~G~~~---i~a~-~~ga~vv~vD----~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~~~~~  109 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVG---LEAA-SEGWEAVLVE----KDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGE  109 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHH---HHHH-HTTCEEEEEC----CCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTC
T ss_pred             cccCCCeEEEeccccchhh---hhhh-hccchhhhcc----cCHHHHhhhhHHHHhhccccceeeeehhcccccccccCC
Confidence            4678888875555 34444   4433 3589988654    5777776653    45543 4444433321111122222


Q ss_pred             CCCccEEEE-C---CCc-ccHHHHH--hhccCCCeeC
Q 023007          259 LPEPALGFN-C---VGG-NSASKVL--KFLRFREEQW  288 (288)
Q Consensus       259 ~g~~D~v~d-~---~g~-~~~~~a~--~~l~~~G~~v  288 (288)
                        ++|+||- .   .+- +.+...+  .+++++|.+|
T Consensus       110 --~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~g~iv  144 (171)
T d1ws6a1         110 --RFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYV  144 (171)
T ss_dssp             --CEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEE
T ss_pred             --ccceeEEccccccCHHHHHHHHHHcCCcCCCeEEE
Confidence              4999874 2   121 2223332  3678888764

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=80.98  E-value=0.76  Score=35.71  Aligned_cols=31  Identities=13%  Similarity=-0.004  Sum_probs=27.4

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      -|+|+|+ |+.|+.++..+...|.+|+++.+.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~   36 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNG   36 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            4889999 999999988888899999998754

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=80.78  E-value=0.73  Score=34.91  Aligned_cols=30  Identities=17%  Similarity=0.145  Sum_probs=27.1

Q ss_pred             eEEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          191 SIVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      .++|+|+ |+.|+.++..+..+|.+|.++.+
T Consensus         7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~   36 (220)
T d1lvla1           7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEG   36 (220)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEec
Confidence            4789999 99999999999999999998863

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=80.74  E-value=0.72  Score=34.77  Aligned_cols=29  Identities=21%  Similarity=0.100  Sum_probs=26.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      |+|+|+ |+.|+.++..+..+|.+|.++.+
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~   33 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEA   33 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEES
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEec
Confidence            789999 99999999999999999999864

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.73  E-value=0.99  Score=30.94  Aligned_cols=35  Identities=17%  Similarity=0.214  Sum_probs=30.7

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHHHHcCCeEEEEEcC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD  222 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la~~~g~~vi~~~~~  222 (288)
                      +.+++++|.|+ |.+|+=+++.+...|.+|..+.+.
T Consensus        30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~   64 (122)
T d1xhca2          30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRG   64 (122)
T ss_dssp             HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEecc
Confidence            44578999999 999999999999999999988754

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.50  E-value=0.84  Score=34.33  Aligned_cols=29  Identities=17%  Similarity=0.058  Sum_probs=26.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCeEEEEEc
Q 023007          192 IVQNGATSIVGQCIIQIARHRGIHSINIIR  221 (288)
Q Consensus       192 vlI~g~~g~vG~~a~~la~~~g~~vi~~~~  221 (288)
                      |+|+|+ |+.|+.++..+.+.|.+|.++.+
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk   34 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEK   34 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEec
Confidence            788899 99999999999999999999964

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=80.44  E-value=1.2  Score=35.84  Aligned_cols=47  Identities=19%  Similarity=0.187  Sum_probs=32.0

Q ss_pred             eEEEeCCCChHHHHHHHHHH-----HcCCeEEEEEcCCC---------CCHHHHHHHHhCCC
Q 023007          191 SIVQNGATSIVGQCIIQIAR-----HRGIHSINIIRDRA---------GSDEAKEKLKGLGA  238 (288)
Q Consensus       191 ~vlI~g~~g~vG~~a~~la~-----~~g~~vi~~~~~~~---------~~~~~~~~~~~~g~  238 (288)
                      -|+|.|| |..|++++..+.     ..|.+|+++.+.+.         .+++..+.++++|.
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~~~~r~~~l~~~~~~~L~~lGl   69 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGL   69 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTC
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCCCcCCeEEEECHHHHHHHHHcCC
Confidence            4899999 999988777663     56999998864321         23344556666653

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.31  E-value=1.1  Score=34.85  Aligned_cols=35  Identities=17%  Similarity=0.311  Sum_probs=30.0

Q ss_pred             CCCCeEEEeCCCChHHHHHHHHH-HHcCCeEEEEEcC
Q 023007          187 NSGDSIVQNGATSIVGQCIIQIA-RHRGIHSINIIRD  222 (288)
Q Consensus       187 ~~g~~vlI~g~~g~vG~~a~~la-~~~g~~vi~~~~~  222 (288)
                      -+|++|+|.|- |.+|..+++++ +..|++++.+.+.
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            47899999999 99999999876 5679999998753