Citrus Sinensis ID: 023033

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
MFCVKGLSESGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLHSIYSLNVCVCLYIYI
cccHHHHHHccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEccccccccccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccEEEEEccccccccccccccccccccccccEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEccccccccEEEEEcccccEEEEEc
cccHHHHHcccccccccHHcEccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHEcccccccEEEEEEEcccccccccHHHHEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEEEEccccEEEEEc
mfcvkglsesgrltsvpskyffekdlnddcinseaetipiidfsmltsgspeqRYKTIQAIGNACLKWGFFevinhgvpntlrDEMIRASESFFDLSDEQKREYagkklfdpirwgtsfnvnvdktlfwrDYLKIhvhpqfnapqnplgfsETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVvnlyppcpqpevvmglpphsdhgLLTILMqndhvglhvrhdgkwipvnpppgsfvvnigDHMEVILSNHFYLYLHSIYSLNVCVCLYIYI
mfcvkglsesgrltsvpsKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGkklfdpirwgtsfnVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLHSIYSLNVCVCLYIYI
MFCVKGLSESGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLHSIYSLNVCVCLYIYI
***************VPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLS***KREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLHSIYSLNVCVCLYIY*
MFCVKGLSESGRLTSVPSKYFF***************IPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKR***********RWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLHSIYSLNVCVCLYIYI
**********GRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLHSIYSLNVCVCLYIYI
*FCVKGLSESGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLHSIYSLNVCVCLYIYI
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
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MFCVKGLSESGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLHSIYSLNVCVCLYIYI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query288 2.2.26 [Sep-21-2011]
D4N501364 Probable 2-oxoglutarate/F N/A no 0.881 0.697 0.358 7e-41
Q39224358 Protein SRG1 OS=Arabidops no no 0.920 0.740 0.348 2e-39
P51091357 Leucoanthocyanidin dioxyg N/A no 0.934 0.753 0.314 8e-38
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.864 0.689 0.362 8e-37
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.920 0.734 0.352 1e-36
Q84MB3365 1-aminocyclopropane-1-car no no 0.934 0.736 0.332 2e-36
D4N500364 Thebaine 6-O-demethylase N/A no 0.892 0.706 0.346 2e-36
D4N502360 Codeine O-demethylase OS= N/A no 0.878 0.702 0.349 9e-36
Q96323356 Leucoanthocyanidin dioxyg no no 0.934 0.755 0.310 6e-35
Q9LSW7365 1-aminocyclopropane-1-car no no 0.930 0.734 0.313 2e-34
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function desciption
 Score =  167 bits (423), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 156/268 (58%), Gaps = 14/268 (5%)

Query: 13  LTSVPSKYF-----FEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLK 67
           L  +PS+Y       +  +    I+ + ET+P+ID   L S  P      +  + +AC +
Sbjct: 26  LAEIPSRYICTVENLQLPVGASVID-DHETVPVIDIENLISSEPVTEKLELDRLHSACKE 84

Query: 68  WGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTL 127
           WGFF+V+NHGV  +L D +    + FF+LS  +K +Y G+K  D   +G +F  + D+TL
Sbjct: 85  WGFFQVVNHGVDTSLVDNVKSDIQGFFNLSMNEKIKY-GQKDGDVEGFGQAFVASEDQTL 143

Query: 128 FWRDY-----LKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESY 182
            W D      L +H+       + PL   ETI+ Y   +++L+  L + + ++L ++   
Sbjct: 144 DWADIFMILTLPLHLRKPHLFSKLPLPLRETIESYSSEMKKLSMVLFEKMEKALQVQAVE 203

Query: 183 IQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQ-NDHVGLHVRHDGK 241
           I++  ++  D  Q++ +N YPPCPQPE+ +GL PHSD G LTIL+Q N+  GL ++++G+
Sbjct: 204 IKEISEVFKDMTQVMRMNYYPPCPQPELAIGLTPHSDFGGLTILLQLNEVEGLQIKNEGR 263

Query: 242 WIPVNPPPGSFVVNIGDHMEVILSNHFY 269
           WI V P P +FVVN+GD +E I++N  Y
Sbjct: 264 WISVKPLPNAFVVNVGDVLE-IMTNGMY 290
Non-heme dioxygenase active on an unknown substrate. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, oripavine, (S)-scoulerine, pavine, noscapine, codeine or thebaine.
Papaver somniferum (taxid: 3469)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|Q96323|LDOX_ARATH Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1 Back     alignment and function description
>sp|Q9LSW7|ACCH9_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 9 OS=Arabidopsis thaliana GN=At5g43440 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query288
255545854336 Flavonol synthase/flavanone 3-hydroxylas 0.940 0.806 0.615 6e-97
225459191344 PREDICTED: thebaine 6-O-demethylase [Vit 0.927 0.776 0.580 6e-93
302142011336 unnamed protein product [Vitis vinifera] 0.927 0.794 0.580 6e-93
357489819342 Gibberellin 3-beta-dioxygenase [Medicago 0.965 0.812 0.575 3e-92
356552933340 PREDICTED: probable 2-oxoglutarate/Fe(II 0.944 0.8 0.597 1e-91
356500734340 PREDICTED: probable 2-oxoglutarate/Fe(II 0.944 0.8 0.589 5e-91
356552935340 PREDICTED: probable 2-oxoglutarate/Fe(II 0.944 0.8 0.586 7e-91
296087451 559 unnamed protein product [Vitis vinifera] 0.937 0.483 0.568 3e-86
225465757353 PREDICTED: probable 2-oxoglutarate/Fe(II 0.937 0.764 0.568 3e-86
359475733352 PREDICTED: LOW QUALITY PROTEIN: probable 0.934 0.764 0.560 1e-83
>gi|255545854|ref|XP_002513987.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223547073|gb|EEF48570.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  360 bits (923), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 168/273 (61%), Positives = 216/273 (79%), Gaps = 2/273 (0%)

Query: 1   MFCVKGLSESGRLTSVPSKYFFEKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYKTIQA 60
           MF VKGL +SG L +VPSKY +++  +D+CI+ + ETIPIIDFS+LTSG+PE+  K IQ 
Sbjct: 1   MFSVKGLLDSGCLDNVPSKYAYKRK-SDECISFDEETIPIIDFSLLTSGTPEEHSKVIQD 59

Query: 61  IGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFN 120
           IGNAC +WGFF VINHGVP  +RDEMI + ESFF+L++E+K+EYAGK+  DPIR+GTSFN
Sbjct: 60  IGNACQEWGFFMVINHGVPKKVRDEMIESIESFFNLTEEEKQEYAGKEPIDPIRYGTSFN 119

Query: 121 VNVDKTLFWRDYLKIHVHPQFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEE 180
           V  DK L WRDYLKI VHP F +P+NP GFS+ ++EYC++ RE+ANELLKGI +SLGLEE
Sbjct: 120 VTEDKALLWRDYLKILVHPHFVSPRNPAGFSKVLEEYCRKTREVANELLKGISKSLGLEE 179

Query: 181 SYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDG 240
           +YI K  ++E  S Q+LV NLYPPCPQP++ MGLPPHSD+GL+T+L+QN   GL V H G
Sbjct: 180 NYIIKKTNVEMGS-QMLVANLYPPCPQPDIAMGLPPHSDYGLITLLIQNGLQGLQVMHHG 238

Query: 241 KWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLH 273
           KW+P+ P   SF+VNIGDHME++    +   +H
Sbjct: 239 KWVPITPLLDSFIVNIGDHMEILTKGKYKSVVH 271

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225459191|ref|XP_002285730.1| PREDICTED: thebaine 6-O-demethylase [Vitis vinifera] Back     alignment and taxonomy information
>gi|302142011|emb|CBI19214.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357489819|ref|XP_003615197.1| Gibberellin 3-beta-dioxygenase [Medicago truncatula] gi|355516532|gb|AES98155.1| Gibberellin 3-beta-dioxygenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356552933|ref|XP_003544816.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|356500734|ref|XP_003519186.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|356552935|ref|XP_003544817.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|296087451|emb|CBI34040.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225465757|ref|XP_002265816.1| PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Vitis vinifera] Back     alignment and taxonomy information
>gi|359475733|ref|XP_003631744.1| PREDICTED: LOW QUALITY PROTEIN: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query288
TAIR|locus:2040575366 AT2G36690 [Arabidopsis thalian 0.923 0.726 0.385 1.1e-50
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.888 0.750 0.396 1e-45
TAIR|locus:2042356357 AT2G44800 [Arabidopsis thalian 0.885 0.714 0.361 3.5e-43
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.906 0.747 0.366 5.7e-43
TAIR|locus:2081962357 AT3G60290 [Arabidopsis thalian 0.885 0.714 0.361 1.2e-42
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.864 0.715 0.389 5.2e-42
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.899 0.723 0.352 5.3e-40
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.909 0.721 0.362 7.8e-39
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.885 0.706 0.377 1.6e-38
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.784 0.620 0.379 5.5e-38
TAIR|locus:2040575 AT2G36690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 109/283 (38%), Positives = 171/283 (60%)

Query:     4 VKGLSESGRLTSVPSKYFF-EKDL-----NDDCINSEAET-IPIIDFSMLTSGSPEQRYK 56
             VK L E+G LT VP+KY + E D      +D  I       +P+IDF+ L    P + + 
Sbjct:    21 VKHLCENG-LTKVPTKYIWPEPDRPILTKSDKLIKPNKNLKLPLIDFAELLG--PNRPH- 76

Query:    57 TIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWG 116
              ++ I  AC  +GFF+V+NHG+   +   MI   + FF+L  E++ +Y    +  P+R+G
Sbjct:    77 VLRTIAEACKTYGFFQVVNHGMEGDVSKNMIDVCKRFFELPYEERSKYMSSDMSAPVRYG 136

Query:   117 TSFNVNVDKTLFWRDYLKIHVHP--QF--NAPQNPLGFSETIQEYCKRVRELANELLKGI 172
             TSFN   D    WRD+LK++ HP   +  + P +P  F  +   Y K  +E+   ++K I
Sbjct:   137 TSFNQIKDNVFCWRDFLKLYAHPLPDYLPHWPSSPSDFRSSAATYAKETKEMFEMMVKAI 196

Query:   173 MESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV 232
             +ESL ++ S  + A +LE  S Q++VVN YPPCP+PE+ +G+PPHSD+G LT+L+Q++  
Sbjct:   197 LESLEIDGSD-EAAKELEEGS-QVVVVNCYPPCPEPELTLGMPPHSDYGFLTLLLQDEVE 254

Query:   233 GLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLHSI 275
             GL + +  +W+ V+P PGSFVVN+GDH+E+  +  +   LH +
Sbjct:   255 GLQILYRDEWVTVDPIPGSFVVNVGDHLEIFSNGRYKSVLHRV 297
GO:0005737 "cytoplasm" evidence=ISM
GO:0009058 "biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042356 AT2G44800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081962 AT3G60290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00015164001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (344 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-78
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 2e-72
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 3e-66
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-64
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 6e-59
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 7e-59
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-55
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-44
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 1e-43
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 4e-42
PLN02704335 PLN02704, PLN02704, flavonol synthase 1e-41
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-40
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 8e-39
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 5e-38
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 6e-38
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-37
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-36
PLN02997325 PLN02997, PLN02997, flavonol synthase 6e-29
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-28
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-28
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-27
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-27
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-24
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 4e-24
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-21
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-19
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 4e-11
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 3e-08
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information 
 Score =  243 bits (621), Expect = 1e-78
 Identities = 107/276 (38%), Positives = 161/276 (58%), Gaps = 15/276 (5%)

Query: 4   VKGLSESGRLTSVPSKYFF---EKDLNDDCINSEAET---IPIIDFSMLTSGSPEQRYKT 57
           VK L +SG +T VP+KY     ++          A     +P+ID + L  GS   R   
Sbjct: 28  VKHLCDSG-ITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAEL-RGS--NRPHV 83

Query: 58  IQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGT 117
           +  +  AC ++GFF+V+NHGVP+ +   MI  +  FF+L  E++ +Y    +  P+R+GT
Sbjct: 84  LATLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGT 143

Query: 118 SFNVNVDKTLFWRDYLKIHVHPQFNA----PQNPLGFSETIQEYCKRVRELANELLKGIM 173
           SFN N D    WRD+LK+  HP  +     P +P    +    Y K  + L  EL++ I+
Sbjct: 144 SFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKVAATYAKATKRLFLELMEAIL 203

Query: 174 ESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVG 233
           ESLG+ +    + ++      Q++VVN YP CP+PE+ +G+PPHSD+G LT+L+Q++  G
Sbjct: 204 ESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEG 263

Query: 234 LHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFY 269
           L + H G+W+ V P PGSFVVN+GDH+E I SN  Y
Sbjct: 264 LQIMHAGRWVTVEPIPGSFVVNVGDHLE-IFSNGRY 298

Length = 374
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 288
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02704335 flavonol synthase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02997325 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.9
PLN03176120 flavanone-3-hydroxylase; Provisional 99.89
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.86
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 92.24
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 83.96
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=1.6e-71  Score=507.56  Aligned_cols=275  Identities=36%  Similarity=0.634  Sum_probs=243.3

Q ss_pred             CcchhhhhhcCCCCCCCCCCcCCCCCCCcCC---CCCCCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEEeCC
Q 023033            1 MFCVKGLSESGRLTSVPSKYFFEKDLNDDCI---NSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHG   77 (288)
Q Consensus         1 ~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~---~~~~~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nhg   77 (288)
                      |..|+.|+++| ++++|++|++|+++++...   .....+||+|||+.+.+++.+++++++++|.+||++||||||+|||
T Consensus        14 ~~~~~~l~~~~-~~~vp~~~v~~~~~~p~~~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHG   92 (361)
T PLN02758         14 IDDVQELRKSK-PTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHG   92 (361)
T ss_pred             cccHHHHHhcC-CCCCCHHHcCCchhccccccccccCCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCC
Confidence            45689999988 9999999999998887532   1134689999999998777667778899999999999999999999


Q ss_pred             CChHHHHHHHHHHHHHhcCCHHHHHhhhcCCCCCceeccccccccCCccccccccccccccC-----CCCCCCCCcchHH
Q 023033           78 VPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRWGTSFNVNVDKTLFWRDYLKIHVHP-----QFNAPQNPLGFSE  152 (288)
Q Consensus        78 i~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~gy~~~~~~~~~~~~d~~e~~~~~~~~-----~~~wP~~~~~f~~  152 (288)
                      |+.++++++++++++||+||.|+|+++... +...+||+...........||+|.+.++..+     .+.||+.+++||+
T Consensus        93 i~~~l~~~~~~~~~~FF~LP~eeK~k~~~~-~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~~~~fr~  171 (361)
T PLN02758         93 IELELLEEIEKVAREFFMLPLEEKQKYPMA-PGTVQGYGQAFVFSEDQKLDWCNMFALGVEPHFIRNPKLWPTKPARFSE  171 (361)
T ss_pred             CCHHHHHHHHHHHHHHhcCCHHHHHHhccc-CCCccccCcccccccccccCeeEEEEeeccCccccccccCccccHHHHH
Confidence            999999999999999999999999998643 3356899765433345567999999887544     3569998899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhccccCCCcceeEeeccCCCCCCCCccCCCCccccCceEEEEcCC--
Q 023033          153 TIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQND--  230 (288)
Q Consensus       153 ~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL~q~~--  230 (288)
                      .+++|+++|.+|+.+|+++|+++||+++++|.+.+  . ...+.||++|||+|+.++..+|+++|||+|+||||+|++  
T Consensus       172 ~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~--~-~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~  248 (361)
T PLN02758        172 TLEVYSREIRELCQRLLKYIAMTLGLKEDRFEEMF--G-EAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGS  248 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCChhhhHHHh--c-CccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCC
Confidence            99999999999999999999999999999999988  6 667899999999999988899999999999999999974  


Q ss_pred             CCCeEEeeCCeeEeecCCCCcEEEEechhhhHHhhcC-CcCCCceEEeCCcc
Q 023033          231 HVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNH-FYLYLHSIYSLNVC  281 (288)
Q Consensus       231 ~~GLqv~~~g~W~~V~~~~~~~vVn~Gd~l~~~~TnG-~~s~~HRV~~~~~~  281 (288)
                      ++||||+++|+|++|+|.||++|||+||+||+ |||| |||++|||+.++++
T Consensus       249 v~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~~-~SNG~~kS~~HRVv~~~~~  299 (361)
T PLN02758        249 CVGLQILKDNTWVPVHPVPNALVINIGDTLEV-LTNGKYKSVEHRAVTNKEK  299 (361)
T ss_pred             CCCeeeeeCCEEEeCCCCCCeEEEEccchhhh-hcCCeeecccceeecCCCC
Confidence            88999999999999999999999999999999 9999 99999999987543

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 4e-36
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 4e-36
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 1e-35
1w9y_A319 The Structure Of Acc Oxidase Length = 319 7e-31
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 8e-16
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 3e-09
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 3e-09
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 4e-05
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  148 bits (373), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 145/283 (51%), Gaps = 14/283 (4%)
Query: 4   VKGLSESGRLTSVPSKYFFEKD----LNDDCINSEAE---TIPIIDFSMLTSGSPEQRYK 56
           V+ L++SG + S+P +Y   K+    +ND  +  + E    +P ID   + S   + R  
Sbjct: 6   VESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIREN 64
Query: 57  TIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIR-W 115
            I+ +  A L WG   +INHG+P  L + + +A E FF LS E+K +YA  +    I+ +
Sbjct: 65  CIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGY 124
Query: 116 GTSFNVNVDKTLFWRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLK 170
           G+    N    L W DY     +P+        P+ P  + E   EY K +R LA ++ K
Sbjct: 125 GSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFK 184
Query: 171 GIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQND 230
            +   LGLE   ++K +    +    + +N YP CPQPE+ +G+  H+D   LT ++ N 
Sbjct: 185 ALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 244
Query: 231 HVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLH 273
             GL + ++GKW+     P S V++IGD +E++ +  +   LH
Sbjct: 245 VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILH 287
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-112
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-99
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-75
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 3e-65
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 3e-62
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-59
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  327 bits (840), Expect = e-112
 Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 15/279 (5%)

Query: 4   VKGLSESGRLTSVPSKYFF-------EKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYK 56
           V+ L++SG + S+P +Y           D+  +    +   +P ID   + S   + R  
Sbjct: 7   VESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIREN 65

Query: 57  TIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIR-W 115
            I+ +  A L WG   +INHG+P  L + + +A E FF LS E+K +YA  +    I+ +
Sbjct: 66  CIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGY 125

Query: 116 GTSFNVNVDKTLFWRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLK 170
           G+    N    L W DY     +P+        P+ P  + E   EY K +R LA ++ K
Sbjct: 126 GSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFK 185

Query: 171 GIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQND 230
            +   LGLE   ++K +    +    + +N YP CPQPE+ +G+  H+D   LT ++ N 
Sbjct: 186 ALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 245

Query: 231 HVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFY 269
             GL + ++GKW+     P S V++IGD +E ILSN  Y
Sbjct: 246 VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE-ILSNGKY 283
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query288
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 83.98
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 80.13
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=1.9e-72  Score=513.41  Aligned_cols=276  Identities=32%  Similarity=0.551  Sum_probs=246.5

Q ss_pred             cchhhhhhcCCCCCCCCCCcCCCCCCCcCCC----C---CCCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEE
Q 023033            2 FCVKGLSESGRLTSVPSKYFFEKDLNDDCIN----S---EAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVI   74 (288)
Q Consensus         2 ~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~----~---~~~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   74 (288)
                      -+||+|+++| +++||++|++|+++++....    .   ...+||+|||+.|.++++++|.+++++|.+||++||||||+
T Consensus         5 ~~v~~l~~~~-~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            5 ERVESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCHHHHHHTT-CSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             ccHHHHHhcC-CCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            4699999998 99999999999887765321    0   12469999999998888878899999999999999999999


Q ss_pred             eCCCChHHHHHHHHHHHHHhcCCHHHHHhhhcCCC-CCceeccccccccCCccccccccccccccC-----CCCCCCCCc
Q 023033           75 NHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKL-FDPIRWGTSFNVNVDKTLFWRDYLKIHVHP-----QFNAPQNPL  148 (288)
Q Consensus        75 nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~-~~~~gy~~~~~~~~~~~~d~~e~~~~~~~~-----~~~wP~~~~  148 (288)
                      ||||+.++++++++.+++||+||.|+|+++..... ..++||+........+..||+|.|.++..+     .+.||+.++
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~  163 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  163 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence            99999999999999999999999999999966544 567899876544456678999999987644     356999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhccccC--CCcceeEeeccCCCCCCCCccCCCCccccCceEEE
Q 023033          149 GFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLET--DSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTIL  226 (288)
Q Consensus       149 ~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~--~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL  226 (288)
                      +||+.+++|+++|.+|+.+|+++|+++||+++++|.+.+  ..  .+.+.||++|||||+.++..+|+++|||+|+||||
T Consensus       164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~--~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL  241 (356)
T 1gp6_A          164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEV--GGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI  241 (356)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHT--THHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh--cccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence            999999999999999999999999999999999999988  41  26678999999999998889999999999999999


Q ss_pred             EcCCCCCeEEeeCCeeEeecCCCCcEEEEechhhhHHhhcC-CcCCCceEEeCCcc
Q 023033          227 MQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNH-FYLYLHSIYSLNVC  281 (288)
Q Consensus       227 ~q~~~~GLqv~~~g~W~~V~~~~~~~vVn~Gd~l~~~~TnG-~~s~~HRV~~~~~~  281 (288)
                      +||+++||||+++|+|++|+|.||++|||+||+||+ |||| ||||+|||+++++.
T Consensus       242 ~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~-~TnG~~kS~~HRVv~~~~~  296 (356)
T 1gp6_A          242 LHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEI-LSNGKYKSILHRGLVNKEK  296 (356)
T ss_dssp             EECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHH-HTTTSSCCCCEEECCCSSC
T ss_pred             EEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHH-hcCCEeeccCceecCCCCC
Confidence            999999999999999999999999999999999999 9999 99999999987644
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 288
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-49
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-41
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-38
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 6e-32
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  165 bits (418), Expect = 1e-49
 Identities = 84/283 (29%), Positives = 139/283 (49%), Gaps = 14/283 (4%)

Query: 4   VKGLSESGRLTSVPSKYFF-------EKDLNDDCINSEAETIPIIDFSMLTSGSPEQRYK 56
           V+ L++SG + S+P +Y           D+  +    +   +P ID   + S   + R  
Sbjct: 6   VESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIREN 64

Query: 57  TIQAIGNACLKWGFFEVINHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKLFDPIRW- 115
            I+ +  A L WG   +INHG+P  L + + +A E FF LS E+K +YA  +    I+  
Sbjct: 65  CIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGY 124

Query: 116 GTSFNVNVDKTLFWRDYLKIHVHPQFNAPQN-----PLGFSETIQEYCKRVRELANELLK 170
           G+    N    L W DY     +P+     +     P  + E   EY K +R LA ++ K
Sbjct: 125 GSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFK 184

Query: 171 GIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQND 230
            +   LGLE   ++K +    +    + +N YP CPQPE+ +G+  H+D   LT ++ N 
Sbjct: 185 ALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 244

Query: 231 HVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNHFYLYLH 273
             GL + ++GKW+     P S V++IGD +E++ +  +   LH
Sbjct: 245 VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILH 287
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query288
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.2e-69  Score=489.25  Aligned_cols=280  Identities=31%  Similarity=0.530  Sum_probs=241.6

Q ss_pred             cchhhhhhcCCCCCCCCCCcCCCCCCCcCC-------CCCCCCCceeecCCCCCCChhHHHHHHHHHHHHHHhcceEEEE
Q 023033            2 FCVKGLSESGRLTSVPSKYFFEKDLNDDCI-------NSEAETIPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVI   74 (288)
Q Consensus         2 ~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~-------~~~~~~iPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   74 (288)
                      -+||.||++| +++||++|++|+.+++...       ..+..+||||||+.|.++|++.|++++++|.+||+++|||||+
T Consensus         4 ~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           4 ERVESLAKSG-IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCHHHHHHTT-CSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cchHHHHhCC-CccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            4799999999 9999999999999988752       2356789999999999999989999999999999999999999


Q ss_pred             eCCCChHHHHHHHHHHHHHhcCCHHHHHhhhcCCC-CCceeccccccccCCccccccccccccc-----cCCCCCCCCCc
Q 023033           75 NHGVPNTLRDEMIRASESFFDLSDEQKREYAGKKL-FDPIRWGTSFNVNVDKTLFWRDYLKIHV-----HPQFNAPQNPL  148 (288)
Q Consensus        75 nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~-~~~~gy~~~~~~~~~~~~d~~e~~~~~~-----~~~~~wP~~~~  148 (288)
                      ||||+.++++++++++++||+||.|+|+++..... +.+.+|+...........++.+.+....     ...+.||+.++
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~  162 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  162 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccc
Confidence            99999999999999999999999999999965432 2344555444333444555555443221     23356999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhccccCCCcceeEeeccCCCCCCCCccCCCCccccCceEEEEc
Q 023033          149 GFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQ  228 (288)
Q Consensus       149 ~f~~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~~~lTlL~q  228 (288)
                      .|++.+++|+++|.+++.+|+++++++||+++++|.+.+.......+.||++|||+++.+...+|+++|||+|+||||+|
T Consensus       163 ~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  242 (349)
T d1gp6a_         163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH  242 (349)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEec
Confidence            99999999999999999999999999999999999988622224567899999999999888999999999999999999


Q ss_pred             CCCCCeEEeeCCeeEeecCCCCcEEEEechhhhHHhhcC-CcCCCceEEeCCccee
Q 023033          229 NDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEVILSNH-FYLYLHSIYSLNVCVC  283 (288)
Q Consensus       229 ~~~~GLqv~~~g~W~~V~~~~~~~vVn~Gd~l~~~~TnG-~~s~~HRV~~~~~~~~  283 (288)
                      +.++||||+.+|+|++|+|.+|++|||+||+||+ |||| ||||+|||+.++++.+
T Consensus       243 ~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~-~TnG~~~St~HRVv~~~~~~R  297 (349)
T d1gp6a_         243 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEI-LSNGKYKSILHRGLVNKEKVR  297 (349)
T ss_dssp             CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHH-HTTTSSCCCCEEECCCSSCCE
T ss_pred             cCCcceeeecCCceEEccCCCCCeeeeHHhHHHH-HhCCCccCcCccccCCCCCCe
Confidence            9999999999999999999999999999999999 9999 9999999998876543
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure