Citrus Sinensis ID: 023043

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQAVCCESKQTS
cccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcHHHHHHHccccccccccccHHHHHHHHHHHcccccccHHHHHHHcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHcHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHccccccccccEEEEEEcccccc
cccHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcHcHHHHHHHHHccHHHHHHHHHHHHcccccEEEEEEEEEEEcccccc
mkglfkskprtpvdiVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSIlygnsesepvSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFfdyiqlpnfdIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRqeypdrsiscFQAVCCESKQTS
mkglfkskprtpvdivrqtrdliiyanrsadvreskredKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLgdilldrsnsvvmtryvssrenlRILMNLLRQEYPDRSISCFQAVCCESKQTS
MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQAVCCESKQTS
*************DIVRQTRDLIIYAN****************LCKNIRELKSILYGN*****VSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQAVCC******
MKGLF**KPRTPVDIVRQTRDLII*******************LCKNIRELKSILY******P**EACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQAV*CES****
MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQAVCCESKQTS
******SKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQAVCCES****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQAVCCESKQTS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query288 2.2.26 [Sep-21-2011]
Q9FGK3343 Putative MO25-like protei yes no 0.965 0.810 0.811 1e-135
Q9M0M4343 Putative MO25-like protei no no 0.965 0.810 0.779 1e-128
Q9ZQ77348 MO25-like protein At2g034 no no 0.965 0.798 0.631 1e-103
Q9H9S4337 Calcium-binding protein 3 yes no 0.937 0.801 0.425 1e-60
Q9DB16337 Calcium-binding protein 3 yes no 0.937 0.801 0.418 5e-60
Q9Y376341 Calcium-binding protein 3 no no 0.916 0.774 0.432 1e-55
Q29RI6341 Calcium-binding protein 3 no no 0.916 0.774 0.432 1e-55
Q06138341 Calcium-binding protein 3 no no 0.916 0.774 0.432 1e-55
O18211338 MO25-like protein 2 OS=Ca no no 0.920 0.784 0.426 5e-52
Q9P7Q8329 Mo25-like protein OS=Schi yes no 0.947 0.829 0.376 8e-48
>sp|Q9FGK3|MO25N_ARATH Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1 Back     alignment and function desciption
 Score =  482 bits (1241), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/281 (81%), Positives = 258/281 (91%), Gaps = 3/281 (1%)

Query: 1   MKGLFKSKPRTPVDIVRQTRDLIIYANRSA---DVRESKREDKMAELCKNIRELKSILYG 57
           MKGLFKSKPRTP D+VRQTRDL+++++RS    D+R+SKR++KMAEL +NIR++KSILYG
Sbjct: 1   MKGLFKSKPRTPADLVRQTRDLLLFSDRSTSLPDLRDSKRDEKMAELSRNIRDMKSILYG 60

Query: 58  NSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIA 117
           NSE+EPV+EACAQLT EFF+E+TLRLLITCLPKLNLE RKDATQVVANLQRQQV+S+LIA
Sbjct: 61  NSEAEPVAEACAQLTQEFFKEDTLRLLITCLPKLNLETRKDATQVVANLQRQQVNSRLIA 120

Query: 118 SDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLP 177
           SDYLEANIDL+D+LI G+ENTDMALHYGAM RECIRHQ VA+YVLES H+KKFFDYIQLP
Sbjct: 121 SDYLEANIDLMDVLIEGFENTDMALHYGAMFRECIRHQIVAKYVLESDHVKKFFDYIQLP 180

Query: 178 NFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGD 237
           NFDIAADAAATFKELLTRHKSTVAEFL+KN DWFFA+YNSKLLESSNYITRRQA+KLLGD
Sbjct: 181 NFDIAADAAATFKELLTRHKSTVAEFLTKNEDWFFADYNSKLLESSNYITRRQAIKLLGD 240

Query: 238 ILLDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQ 278
           ILLDRSNS VMT+YVSSR+NLRILMNLLR+      I  F 
Sbjct: 241 ILLDRSNSAVMTKYVSSRDNLRILMNLLRESSKSIQIEAFH 281

Arabidopsis thaliana (taxid: 3702)
>sp|Q9M0M4|MO25M_ARATH Putative MO25-like protein At4g17270 OS=Arabidopsis thaliana GN=At4g17270 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZQ77|MO25L_ARATH MO25-like protein At2g03410 OS=Arabidopsis thaliana GN=At2g03410 PE=2 SV=1 Back     alignment and function description
>sp|Q9H9S4|CB39L_HUMAN Calcium-binding protein 39-like OS=Homo sapiens GN=CAB39L PE=1 SV=3 Back     alignment and function description
>sp|Q9DB16|CB39L_MOUSE Calcium-binding protein 39-like OS=Mus musculus GN=Cab39l PE=1 SV=3 Back     alignment and function description
>sp|Q9Y376|CAB39_HUMAN Calcium-binding protein 39 OS=Homo sapiens GN=CAB39 PE=1 SV=1 Back     alignment and function description
>sp|Q29RI6|CAB39_BOVIN Calcium-binding protein 39 OS=Bos taurus GN=CAB39 PE=2 SV=1 Back     alignment and function description
>sp|Q06138|CAB39_MOUSE Calcium-binding protein 39 OS=Mus musculus GN=Cab39 PE=1 SV=2 Back     alignment and function description
>sp|O18211|MO25M_CAEEL MO25-like protein 2 OS=Caenorhabditis elegans GN=mop-25.2 PE=3 SV=1 Back     alignment and function description
>sp|Q9P7Q8|PMO25_SCHPO Mo25-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmo25 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query288
225469268340 PREDICTED: putative MO25-like protein At 0.965 0.817 0.874 1e-142
449443544340 PREDICTED: putative MO25-like protein At 0.965 0.817 0.853 1e-138
255581605 445 Calcium-binding protein, putative [Ricin 0.965 0.624 0.854 1e-138
297790907343 hypothetical protein ARALYDRAFT_916635 [ 0.965 0.810 0.829 1e-136
356555740334 PREDICTED: putative MO25-like protein At 0.965 0.832 0.841 1e-135
363807646334 uncharacterized protein LOC100797189 [Gl 0.965 0.832 0.834 1e-135
89257511324 Mo25 family protein [Brassica oleracea] 0.965 0.858 0.822 1e-135
224086468339 predicted protein [Populus trichocarpa] 0.927 0.787 0.873 1e-135
217074054337 unknown [Medicago truncatula] 0.965 0.824 0.835 1e-134
357447933337 hypothetical protein MTR_2g026050 [Medic 0.965 0.824 0.835 1e-134
>gi|225469268|ref|XP_002267661.1| PREDICTED: putative MO25-like protein At5g47540 [Vitis vinifera] gi|302141642|emb|CBI18773.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 243/278 (87%), Positives = 261/278 (93%)

Query: 1   MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSE 60
           MKGLFKSKPRTPV++VRQTRDL+IYANRS+D RESKRE+KM+EL K IRELKSILYGNSE
Sbjct: 1   MKGLFKSKPRTPVEVVRQTRDLLIYANRSSDTRESKREEKMSELSKLIRELKSILYGNSE 60

Query: 61  SEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDY 120
           +EP +EAC QLT EFF+ENTLRLLITCLPKLNLE RKDATQVVANLQRQQVHS+LIASDY
Sbjct: 61  AEPQAEACCQLTQEFFKENTLRLLITCLPKLNLETRKDATQVVANLQRQQVHSRLIASDY 120

Query: 121 LEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFD 180
           LEANIDL+D+LI+GY+NTDMALHYGAMLRECIRHQ+VARYVLES HMKKFFDYIQLPNFD
Sbjct: 121 LEANIDLMDVLISGYDNTDMALHYGAMLRECIRHQTVARYVLESAHMKKFFDYIQLPNFD 180

Query: 181 IAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILL 240
           IAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLES+NYITRRQAVKLLGDILL
Sbjct: 181 IAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESTNYITRRQAVKLLGDILL 240

Query: 241 DRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQ 278
           DRSNSVVMTRYVSSR+NLRILMNLLR+      I  F 
Sbjct: 241 DRSNSVVMTRYVSSRDNLRILMNLLRESSKSIQIEAFH 278

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449443544|ref|XP_004139537.1| PREDICTED: putative MO25-like protein At5g47540-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255581605|ref|XP_002531607.1| Calcium-binding protein, putative [Ricinus communis] gi|223528774|gb|EEF30782.1| Calcium-binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297790907|ref|XP_002863338.1| hypothetical protein ARALYDRAFT_916635 [Arabidopsis lyrata subsp. lyrata] gi|297309173|gb|EFH39597.1| hypothetical protein ARALYDRAFT_916635 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356555740|ref|XP_003546188.1| PREDICTED: putative MO25-like protein At5g47540-like [Glycine max] Back     alignment and taxonomy information
>gi|363807646|ref|NP_001241904.1| uncharacterized protein LOC100797189 [Glycine max] gi|255635566|gb|ACU18133.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|89257511|gb|ABD65001.1| Mo25 family protein [Brassica oleracea] Back     alignment and taxonomy information
>gi|224086468|ref|XP_002307894.1| predicted protein [Populus trichocarpa] gi|222853870|gb|EEE91417.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|217074054|gb|ACJ85387.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357447933|ref|XP_003594242.1| hypothetical protein MTR_2g026050 [Medicago truncatula] gi|355483290|gb|AES64493.1| hypothetical protein MTR_2g026050 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query288
TAIR|locus:2168958343 AT5G47540 [Arabidopsis thalian 0.961 0.807 0.814 8.5e-120
TAIR|locus:2130774343 AT4G17270 [Arabidopsis thalian 0.961 0.807 0.782 3.2e-113
TAIR|locus:2063830348 AT2G03410 [Arabidopsis thalian 0.944 0.781 0.643 1.1e-92
ZFIN|ZDB-GENE-041114-204334 cab39l "calcium binding protei 0.930 0.802 0.443 1.9e-58
UNIPROTKB|Q29RI6341 CAB39 "Calcium-binding protein 0.937 0.791 0.429 8.4e-58
UNIPROTKB|E2R8W7341 CAB39 "Uncharacterized protein 0.937 0.791 0.429 8.4e-58
UNIPROTKB|Q9Y376341 CAB39 "Calcium-binding protein 0.937 0.791 0.429 8.4e-58
RGD|1306390341 Cab39 "calcium binding protein 0.937 0.791 0.429 8.4e-58
MGI|MGI:107438341 Cab39 "calcium binding protein 0.937 0.791 0.429 1.1e-57
ZFIN|ZDB-GENE-040625-158341 cab39 "calcium binding protein 0.937 0.791 0.432 2.8e-57
TAIR|locus:2168958 AT5G47540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
 Identities = 228/280 (81%), Positives = 258/280 (92%)

Query:     1 MKGLFKSKPRTPVDIVRQTRDLIIYANRSA---DVRESKREDKMAELCKNIRELKSILYG 57
             MKGLFKSKPRTP D+VRQTRDL+++++RS    D+R+SKR++KMAEL +NIR++KSILYG
Sbjct:     1 MKGLFKSKPRTPADLVRQTRDLLLFSDRSTSLPDLRDSKRDEKMAELSRNIRDMKSILYG 60

Query:    58 NSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIA 117
             NSE+EPV+EACAQLT EFF+E+TLRLLITCLPKLNLE RKDATQVVANLQRQQV+S+LIA
Sbjct:    61 NSEAEPVAEACAQLTQEFFKEDTLRLLITCLPKLNLETRKDATQVVANLQRQQVNSRLIA 120

Query:   118 SDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLP 177
             SDYLEANIDL+D+LI G+ENTDMALHYGAM RECIRHQ VA+YVLES H+KKFFDYIQLP
Sbjct:   121 SDYLEANIDLMDVLIEGFENTDMALHYGAMFRECIRHQIVAKYVLESDHVKKFFDYIQLP 180

Query:   178 NFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGD 237
             NFDIAADAAATFKELLTRHKSTVAEFL+KN DWFFA+YNSKLLESSNYITRRQA+KLLGD
Sbjct:   181 NFDIAADAAATFKELLTRHKSTVAEFLTKNEDWFFADYNSKLLESSNYITRRQAIKLLGD 240

Query:   238 ILLDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCF 277
             ILLDRSNS VMT+YVSSR+NLRILMNLLR+      I  F
Sbjct:   241 ILLDRSNSAVMTKYVSSRDNLRILMNLLRESSKSIQIEAF 280
GO:0005737 "cytoplasm" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2130774 AT4G17270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063830 AT2G03410 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-204 cab39l "calcium binding protein 39-like" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q29RI6 CAB39 "Calcium-binding protein 39" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R8W7 CAB39 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y376 CAB39 "Calcium-binding protein 39" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1306390 Cab39 "calcium binding protein 39" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:107438 Cab39 "calcium binding protein 39" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040625-158 cab39 "calcium binding protein 39" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FGK3MO25N_ARATHNo assigned EC number0.81130.96520.8104yesno
Q9P7Q8PMO25_SCHPONo assigned EC number0.37630.94790.8297yesno
Q9DB16CB39L_MOUSENo assigned EC number0.41870.93750.8011yesno
Q9M0M4MO25M_ARATHNo assigned EC number0.77930.96520.8104nono
Q9H9S4CB39L_HUMANNo assigned EC number0.42590.93750.8011yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00012467001
SubName- Full=Chromosome undetermined scaffold_383, whole genome shotgun sequence; (340 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
pfam08569334 pfam08569, Mo25, Mo25-like 1e-106
>gnl|CDD|219909 pfam08569, Mo25, Mo25-like Back     alignment and domain information 
 Score =  312 bits (802), Expect = e-106
 Identities = 126/267 (47%), Positives = 182/267 (68%), Gaps = 5/267 (1%)

Query: 1   MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSE 60
           M  LFK  P+TP D+VR  +D +    +   +     E    E+ KN+ +LK IL G+++
Sbjct: 1   MPFLFKKSPKTPSDLVRSLKDQL---LKLDSLSSDNAEKAQEEVSKNLSQLKEILVGDTD 57

Query: 61  SEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLI-ASD 119
           +EP  E  AQL  E + E+ L LLI  L KL+ E RKD   + +N+ R+ + +      D
Sbjct: 58  AEPTQEQIAQLAQEMYSEDLLYLLIDNLHKLDFETRKDVALIFSNILRRSIDNNSRPTVD 117

Query: 120 YLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNF 179
           YL A+ ++L +L+ GYE +++AL  G MLRECI+H+++A+ +L S    KFF Y+QL  F
Sbjct: 118 YLVAHPEILSLLLKGYETSEIALTCGDMLRECIKHEALAKIILYSPQFWKFFKYVQLSTF 177

Query: 180 DIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDIL 239
           +IA DA +TFK+LLT HK  VAEFL  NYD FF+ +N KLL+S+NY+T+RQ++KLLG++L
Sbjct: 178 EIATDAFSTFKDLLTTHKKLVAEFLLNNYDRFFSMFN-KLLQSTNYVTKRQSLKLLGELL 236

Query: 240 LDRSNSVVMTRYVSSRENLRILMNLLR 266
           LDR+NS VMT+Y+SS ENL+++MNLLR
Sbjct: 237 LDRANSKVMTKYISSPENLKLMMNLLR 263

Mo25-like proteins are involved in both polarised growth and cytokinesis. In fission yeast Mo25 is localised alternately to the spindle pole body and to the site cell division in a cell cycle dependent manner. Length = 334

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 288
PF08569335 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like pro 100.0
KOG1566342 consensus Conserved protein Mo25 [Function unknown 100.0
PF08767319 CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1 83.83
PF08064107 UME: UME (NUC010) domain; InterPro: IPR012993 This 83.11
PF10508 503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 82.64
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 82.61
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 82.36
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 80.61
>PF08569 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like proteins are involved in both polarised growth and cytokinesis Back     alignment and domain information 
Probab=100.00  E-value=9.8e-110  Score=792.27  Aligned_cols=283  Identities=53%  Similarity=0.839  Sum_probs=250.0

Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHhhcCCCchhhhhHHHHHHHHHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHhhch
Q 023043            1 MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENT   80 (288)
Q Consensus         1 M~~lF~~~~k~P~elVr~l~e~l~~L~~~~~~~~~K~~~k~eei~K~L~~mK~il~G~~e~~p~~e~~~qLa~ei~~~dl   80 (288)
                      |+||||++||||+|+||+++|+|.+|+ .  ..++++++..|||+|+|++||.||+|++|.+|+||+|+||++|+|++|+
T Consensus         1 M~FlF~k~~KtP~ElVr~l~e~L~~L~-~--~~~~~~~k~~eeisK~L~~mK~IL~G~~e~ep~~e~v~qLa~Ei~~~dl   77 (335)
T PF08569_consen    1 MSFLFKKKPKTPAELVRSLREALEKLD-S--KSDKKREKAQEEISKYLQQMKEILYGDGEPEPNPEQVAQLAQEIYRSDL   77 (335)
T ss_dssp             -----------HHHHHHHHHHHHHHHH-S--S-HHHHHHHHHHHHHHHHHHHHHHHS-SS----HHHHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCHHHHHHHHHHHHHHhc-c--ccCcchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhCH
Confidence            999999999999999999999999998 2  2456666667999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCCChhhhhhHHHHHHHHhhhcccCcc-chhhHhhcC-HhHHHHHHHhccCchhhhhHHHHHHHHHHHHHHH
Q 023043           81 LRLLITCLPKLNLEARKDATQVVANLQRQQVHSKL-IASDYLEAN-IDLLDILIAGYENTDMALHYGAMLRECIRHQSVA  158 (288)
Q Consensus        81 l~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~r~-p~v~Yl~~~-peil~~L~~gY~~~dial~~G~mLRecik~e~la  158 (288)
                      +..||.+|+.||||+|||+++||++++|+++++++ |+|+||++| |||+++|+.||++||+|++||.|||||+|||++|
T Consensus        78 l~~Li~~L~~L~fEsrKdv~~if~~llr~~~~~~~~p~v~yl~~~~peil~~L~~gy~~~dial~~g~mlRec~k~e~l~  157 (335)
T PF08569_consen   78 LYLLIRNLPKLDFESRKDVAQIFSNLLRRQIGSRSPPTVDYLERHRPEILDILLRGYENPDIALNCGDMLRECIKHESLA  157 (335)
T ss_dssp             HHHHHHTGGGS-HHHHHHHHHHHHHHHT--BTTB--HHHHHHHT--THHHHHHHHGGGSTTTHHHHHHHHHHHTTSHHHH
T ss_pred             HHHHHHHhhhCCCcccccHHHHHHHHHhhccCCCCCchHHHHHhCCHHHHHHHHHHhcCccccchHHHHHHHHHhhHHHH
Confidence            99999999999999999999999999999999999 999999999 9999999999999999999999999999999999


Q ss_pred             HHHhcchhhHhhhhhccCCCchhhhhHHHHHHHHHhhChhHHHHHHHhhHHHHHHHHhHhhccCCCceehhchhhHHHHH
Q 023043          159 RYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDI  238 (288)
Q Consensus       159 ~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefl~~nyd~Ff~~yn~~Ll~s~NYVTkRQSLKLLgel  238 (288)
                      ++||++++||+||+|++.++||||||||+||+|+||+||++||+||.+|||+||+.|| +||+|+|||||||||||||||
T Consensus       158 ~~iL~~~~f~~ff~~~~~~~Fdiasdaf~t~~~llt~hk~~~a~fl~~n~d~ff~~~~-~Ll~s~NYvtkrqslkLL~el  236 (335)
T PF08569_consen  158 KIILYSECFWKFFKYVQLPNFDIASDAFSTFKELLTRHKKLVAEFLSNNYDRFFQKYN-KLLESSNYVTKRQSLKLLGEL  236 (335)
T ss_dssp             HHHHTSGGGGGHHHHTTSSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHH-HHCT-SSHHHHHHHHHHHHHH
T ss_pred             HHHhCcHHHHHHHHHhcCCccHhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-HHccCCCeEeehhhHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999998 999999999999999999999


Q ss_pred             hccCCchHHHHHhcCChhhHHHHHHHhhCCCCCcccccceeeeeecccC
Q 023043          239 LLDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQAVCCESKQT  287 (288)
Q Consensus       239 Lldr~N~~vM~rYi~~~~NLKl~M~LL~d~sknIQ~EAFhVf~~~~~~~  287 (288)
                      |+||+|++||+|||+||+|||+||+||+|+|||||+|||||||+|||..
T Consensus       237 lldr~n~~vm~~yi~~~~nLkl~M~lL~d~sk~Iq~eAFhvFKvFVANp  285 (335)
T PF08569_consen  237 LLDRSNFNVMTRYISSPENLKLMMNLLRDKSKNIQFEAFHVFKVFVANP  285 (335)
T ss_dssp             HHSGGGHHHHHHHTT-HHHHHHHHHHTT-S-HHHHHHHHHHHHHHHH-S
T ss_pred             HHchhHHHHHHHHHCCHHHHHHHHHHhcCcchhhhHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999999999999999853

In fission yeast Mo25 is localised alternately to the spindle pole body and to the site of cell division in a cell cycle dependent manner [, ]. ; PDB: 2WTK_A 1UPK_A 3GNI_A 1UPL_A.
>KOG1566 consensus Conserved protein Mo25 [Function unknown] Back     alignment and domain information
>PF08767 CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a leucine-rich nuclear export signal (NES) Back     alignment and domain information
>PF08064 UME: UME (NUC010) domain; InterPro: IPR012993 This domain is characteristic of UVSB PI-3 kinase, MEI-41 and ESR1 [] Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
3zhp_A340 Human Mst3 (stk24) In Complex With Mo25beta Length 5e-62
3gni_A341 Structure Of Strad And Mo25 Length = 341 9e-57
1upk_A341 Crystal Structure Of Mo25 In Complex With A C-Termi 9e-49
>pdb|3ZHP|A Chain A, Human Mst3 (stk24) In Complex With Mo25beta Length = 340 Back     alignment and structure 
Iteration: 1

 Score =  234 bits (596), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 119/280 (42%), Positives = 180/280 (64%), Gaps = 7/280 (2%)
Query: 1   MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAE-LCKNIRELKSILYGNS 59
           M  LF    + P +IV+  +D     N +   ++ K+ DK +E + K+++ +K IL G +
Sbjct: 6   MLPLFSKSHKNPAEIVKILKD-----NLAILEKQDKKTDKASEEVSKSLQAMKEILCGTN 60
Query: 60  ESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASD 119
           E EP +EA AQL  E +    L  LI  L  ++ E +KD TQ+  N+ R+Q+ ++    +
Sbjct: 61  EKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVE 120
Query: 120 YLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNF 179
           Y+ A+  +L +L+ GYE   +AL  G MLRECIRH+ +A+ +L S   + FF Y++L  F
Sbjct: 121 YISAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTF 180
Query: 180 DIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDIL 239
           DIA+DA ATFK+LLTRHK  VA+FL +NYD  F +Y  KLL+S NY+T+RQ++KLLG+++
Sbjct: 181 DIASDAFATFKDLLTRHKVLVADFLEQNYDTIFEDY-EKLLQSENYVTKRQSLKLLGELI 239
Query: 240 LDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQA 279
           LDR N  +MT+Y+S  ENL+++MNLLR + P+     F  
Sbjct: 240 LDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHV 279
>pdb|3GNI|A Chain A, Structure Of Strad And Mo25 Length = 341 Back     alignment and structure
>pdb|1UPK|A Chain A, Crystal Structure Of Mo25 In Complex With A C-Terminal Peptide Of Strad Length = 341 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query288
1upk_A341 MO25 protein; transferase, armadillo; HET: MSE; 1. 1e-117
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A* Length = 341 Back     alignment and structure
 Score =  340 bits (873), Expect = e-117
 Identities = 116/277 (41%), Positives = 178/277 (64%), Gaps = 2/277 (0%)

Query: 1   MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSE 60
           M   F    ++P DIV+  ++ +    +  D+ + K E    E+ KN+  +K ILYG +E
Sbjct: 1   MPFPFGKSHKSPADIVKNLKESMAVLEKQ-DISDKKAEKATEEVSKNLVAMKEILYGTNE 59

Query: 61  SEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDY 120
            EP +EA AQL  E +    L  L+  L  ++ E +KD  Q+  N+ R+Q+ ++    +Y
Sbjct: 60  KEPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEY 119

Query: 121 LEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFD 180
           +    ++L +L+ GYE+ ++AL+ G MLRECIRH+ +A+ +L S+    FF Y+++  FD
Sbjct: 120 ICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFD 179

Query: 181 IAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILL 240
           IA+DA ATFK+LLTRHK   AEFL ++YD FF+EY  KLL S NY+T+RQ++KLLG++LL
Sbjct: 180 IASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYE-KLLHSENYVTKRQSLKLLGELLL 238

Query: 241 DRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCF 277
           DR N  +MT+Y+S  ENL+++MNLLR +  +     F
Sbjct: 239 DRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAF 275
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query288
1upk_A341 MO25 protein; transferase, armadillo; HET: MSE; 1. 100.0
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 96.85
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 96.76
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 96.46
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 95.9
1wa5_B 530 Importin alpha subunit; nuclear transport/complex, 95.35
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 95.34
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 94.71
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 94.19
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 93.34
4b8j_A 528 Importin subunit alpha-1A; transport protein, nucl 92.66
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 92.37
3tpo_A 529 Importin subunit alpha-2; nuclear import, protein 92.3
2jdq_A 450 Importin alpha-1 subunit; transport, PB2 subunit, 92.12
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 91.96
4b8j_A 528 Importin subunit alpha-1A; transport protein, nucl 91.61
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 89.26
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 88.08
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 87.72
3now_A 810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 86.54
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 85.9
1ibr_B 462 P95, importin beta-1 subunit, nuclear factor; smal 85.45
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 84.98
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 84.31
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 84.26
1qgr_A 876 Protein (importin beta subunit); transport recepto 83.33
3ul1_B 510 Importin subunit alpha-2; arm repeat, armadillo re 82.12
1u6g_C 1230 TIP120 protein, CAND1; cullin repeat, heat repeat, 82.01
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 81.47
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 81.05
1qgr_A 876 Protein (importin beta subunit); transport recepto 80.02
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A* Back     alignment and structure
Probab=100.00  E-value=2.6e-114  Score=820.48  Aligned_cols=282  Identities=40%  Similarity=0.717  Sum_probs=258.4

Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHhhcCCCchhhhhHHHH-HHHHHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHhhc
Q 023043            1 MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKM-AELCKNIRELKSILYGNSESEPVSEACAQLTAEFFREN   79 (288)
Q Consensus         1 M~~lF~~~~k~P~elVr~l~e~l~~L~~~~~~~~~K~~~k~-eei~K~L~~mK~il~G~~e~~p~~e~~~qLa~ei~~~d   79 (288)
                      |+  ||++||||+|+||+++|+|.+|+.++  ++++.++|+ |||+|+|++||.||||++|++|+||+|+|||+|+|++|
T Consensus         3 m~--F~~~~ktP~elVr~l~d~l~~l~~~~--~~~~~~~k~~ee~sK~l~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~d   78 (341)
T 1upk_A            3 FP--FGKSHKSPADIVKNLKESMAVLEKQD--ISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSG   78 (341)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHC-----CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHS
T ss_pred             CC--CCCCCCCHHHHHHHHHHHHHHHhccc--cccchhhHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhC
Confidence            66  99999999999999999999999643  234444455 89999999999999999999999999999999999999


Q ss_pred             hHHHHHhhCCCCChhhhhhHHHHHHHHhhhcccCccchhhHhhcCHhHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHH
Q 023043           80 TLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVAR  159 (288)
Q Consensus        80 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~r~p~v~Yl~~~peil~~L~~gY~~~dial~~G~mLRecik~e~la~  159 (288)
                      +|++||.+||+||||+|||+++||++++|+++|+++|+|+||++||||+++|++||++||+|++||+|||||+|||.+|+
T Consensus        79 ll~~Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe~~diAl~~G~mLRecir~e~la~  158 (341)
T 1upk_A           79 LLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAK  158 (341)
T ss_dssp             HHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHHHHHHHHHTSHHHHH
T ss_pred             HHHHHHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhccchhHhHHHHHHHHHHHhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcchhhHhhhhhccCCCchhhhhHHHHHHHHHhhChhHHHHHHHhhHHHHHHHHhHhhccCCCceehhchhhHHHHHh
Q 023043          160 YVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDIL  239 (288)
Q Consensus       160 ~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefl~~nyd~Ff~~yn~~Ll~s~NYVTkRQSLKLLgelL  239 (288)
                      +||+|++||+||+|++.|+||||||||+||||+||+||++||+||++|||+||++|| +||+|+||||||||||||||||
T Consensus       159 ~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~-~Ll~S~NYVTkRQSlKLLgelL  237 (341)
T 1upk_A          159 IILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYE-KLLHSENYVTKRQSLKLLGELL  237 (341)
T ss_dssp             HHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHH-HHTTCSSHHHHHHHHHHHHHHH
T ss_pred             HHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHH-HHhcCCcchhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999 8999999999999999999999


Q ss_pred             ccCCchHHHHHhcCChhhHHHHHHHhhCCCCCcccccceeeeeecccC
Q 023043          240 LDRSNSVVMTRYVSSRENLRILMNLLRQEYPDRSISCFQAVCCESKQT  287 (288)
Q Consensus       240 ldr~N~~vM~rYi~~~~NLKl~M~LL~d~sknIQ~EAFhVf~~~~~~~  287 (288)
                      |||+|++||+|||+|++|||+||+||+|+|||||+|||||||+|||-.
T Consensus       238 ldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP  285 (341)
T 1upk_A          238 LDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANP  285 (341)
T ss_dssp             HSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCS
T ss_pred             hCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCC
Confidence            999999999999999999999999999999999999999999999853
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 288
d1upka_330 a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) 1e-129
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 330 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Mo25 protein
domain: Mo25 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  369 bits (948), Expect = e-129
 Identities = 113/260 (43%), Positives = 174/260 (66%), Gaps = 2/260 (0%)

Query: 10  RTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACA 69
           ++P DIV+  ++ +    +  D+ + K E    E+ KN+  +K ILYG +E EP +EA A
Sbjct: 1   KSPADIVKNLKESMAVLEKQ-DISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVA 59

Query: 70  QLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLD 129
           QL  E +    L  L+  L  ++ E +KD  Q+  N+ R+Q+ ++    +Y+    ++L 
Sbjct: 60  QLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILF 119

Query: 130 ILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATF 189
           +L+ GYE+ ++AL+ G MLRECIRH+ +A+ +L S+    FF Y+++  FDIA+DA ATF
Sbjct: 120 MLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATF 179

Query: 190 KELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMT 249
           K+LLTRHK   AEFL ++YD FF+EY  KLL S NY+T+RQ++KLLG++LLDR N  +MT
Sbjct: 180 KDLLTRHKLLSAEFLEQHYDRFFSEYE-KLLHSENYVTKRQSLKLLGELLLDRHNFTIMT 238

Query: 250 RYVSSRENLRILMNLLRQEY 269
           +Y+S  ENL+++MNLLR + 
Sbjct: 239 KYISKPENLKLMMNLLRDKS 258

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query288
d1upka_330 Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 96.0
d1wa5b_ 503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 95.8
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 95.47
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 94.92
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 94.83
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 94.6
d1jdha_ 529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 89.98
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 88.05
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Mo25 protein
domain: Mo25 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-113  Score=803.45  Aligned_cols=276  Identities=41%  Similarity=0.719  Sum_probs=261.4

Q ss_pred             CChHHHHHHHHHHHHHhhcCCCchhhhhHHHHHHHHHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHhhchHHHHHhhCC
Q 023043           10 RTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLP   89 (288)
Q Consensus        10 k~P~elVr~l~e~l~~L~~~~~~~~~K~~~k~eei~K~L~~mK~il~G~~e~~p~~e~~~qLa~ei~~~dll~~Li~~l~   89 (288)
                      |||+|+||+++|+|.+|+..+. +++|+++++||++|+|++||.||||++|+||+||+|+||++|+|++|+|++||.+||
T Consensus         1 ktP~elVr~~~d~l~~l~~~~~-~~~k~ek~~ee~~K~l~~mK~iL~G~~e~ep~~e~~~qL~~e~~~~d~l~~Li~~L~   79 (330)
T d1upka_           1 KSPADIVKNLKESMAVLEKQDI-SDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLSTLVADLQ   79 (330)
T ss_dssp             CCHHHHHHHHHHHHHHHHC----CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHSHHHHHHHTGG
T ss_pred             CCHHHHHHHHHHHHHHHhcCCC-cchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhChHHHHHHhCC
Confidence            7999999999999999998653 567777778999999999999999999999999999999999999999999999999


Q ss_pred             CCChhhhhhHHHHHHHHhhhcccCccchhhHhhcCHhHHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHhcchhhHh
Q 023043           90 KLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKK  169 (288)
Q Consensus        90 ~L~fE~RKdv~~If~~llr~~~~~r~p~v~Yl~~~peil~~L~~gY~~~dial~~G~mLRecik~e~la~~iL~~~~f~~  169 (288)
                      +||||+|||+++||++++||++|+|+|+|+||++||||+++|++||++||+|++||.|||||||||++|++||++++||+
T Consensus        80 ~L~fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~~~eil~~L~~gye~~eiAl~~G~mLREcik~e~lak~iL~s~~f~~  159 (330)
T d1upka_          80 LIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYD  159 (330)
T ss_dssp             GSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHHHHHHHHHTSHHHHHHHHHSGGGGH
T ss_pred             CCCCchhhhHHHHHHHHhhcCCCCCCccHHHHHcCHHHHHHHHhhcCCcchhhhhhHHHHHHHhhHHHHHHHHccHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhccCCCchhhhhHHHHHHHHHhhChhHHHHHHHhhHHHHHHHHhHhhccCCCceehhchhhHHHHHhccCCchHHHH
Q 023043          170 FFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMT  249 (288)
Q Consensus       170 fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefl~~nyd~Ff~~yn~~Ll~s~NYVTkRQSLKLLgelLldr~N~~vM~  249 (288)
                      ||+|+++|+||||||||+||||+||+||++|||||++|||+||++|| +||+|+||||||||||||||||+||+|++||+
T Consensus       160 fF~yv~~~~FdiasDAf~TfkelLt~hk~~~aefl~~Nyd~Ff~~~~-~LL~s~NYVtrRqSlKLLgelLldr~N~~vm~  238 (330)
T d1upka_         160 FFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYE-KLLHSENYVTKRQSLKLLGELLLDRHNFTIMT  238 (330)
T ss_dssp             HHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHH-HHTTCSSHHHHHHHHHHHHHHHHSGGGHHHHH
T ss_pred             HHHHHcCCchHHHHHHHHHHHHHHHhCHHHHHHHHHHhHHHHHHHHH-HHhcCCchHHHHHHHHHHHHHHhhhhHHHHHH
Confidence            99999999999999999999999999999999999999999999998 99999999999999999999999999999999


Q ss_pred             HhcCChhhHHHHHHHhhCCCCCcccccceeeeeecccC
Q 023043          250 RYVSSRENLRILMNLLRQEYPDRSISCFQAVCCESKQT  287 (288)
Q Consensus       250 rYi~~~~NLKl~M~LL~d~sknIQ~EAFhVf~~~~~~~  287 (288)
                      |||+|++|||+||+||+|+|||||+|||||||+|||-.
T Consensus       239 ~Yvs~~~nLkl~M~LLrd~sk~Iq~EAFhVFKvFVANp  276 (330)
T d1upka_         239 KYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANP  276 (330)
T ss_dssp             HHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCS
T ss_pred             HHhCCHHHHHHHHHHhcCchhhHHHHhhhHhhhhhcCC
Confidence            99999999999999999999999999999999999853
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure