Citrus Sinensis ID: 023048
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 288 | ||||||
| 255578623 | 443 | Salutaridinol 7-O-acetyltransferase, put | 0.986 | 0.641 | 0.414 | 6e-60 | |
| 255578621 | 460 | Anthranilate N-benzoyltransferase protei | 0.996 | 0.623 | 0.409 | 3e-59 | |
| 255539124 | 440 | Anthranilate N-benzoyltransferase protei | 0.975 | 0.638 | 0.442 | 4e-55 | |
| 224061883 | 449 | predicted protein [Populus trichocarpa] | 0.979 | 0.628 | 0.451 | 2e-54 | |
| 255566100 | 468 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr | 0.993 | 0.611 | 0.397 | 5e-51 | |
| 255584551 | 471 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr | 0.993 | 0.607 | 0.385 | 1e-50 | |
| 356536997 | 466 | PREDICTED: vinorine synthase-like [Glyci | 0.986 | 0.609 | 0.382 | 2e-50 | |
| 359492333 | 445 | PREDICTED: vinorine synthase-like [Vitis | 0.958 | 0.620 | 0.430 | 4e-50 | |
| 351721226 | 456 | uncharacterized protein LOC100305374 [Gl | 0.986 | 0.622 | 0.393 | 1e-49 | |
| 255547850 | 441 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr | 0.947 | 0.619 | 0.390 | 2e-46 |
| >gi|255578623|ref|XP_002530173.1| Salutaridinol 7-O-acetyltransferase, putative [Ricinus communis] gi|223530334|gb|EEF32228.1| Salutaridinol 7-O-acetyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 180/294 (61%), Gaps = 10/294 (3%)
Query: 1 MIGDGTTFSSFMKSWAATARKTLEEAVCRPSFDASSLFPPRDAYPREATAKAQFARFKKT 60
++ DG +SF+K+WA TA ++ ++ P+FD SS+FP D +P++A A + F +
Sbjct: 152 LVMDGCALASFLKAWAGTAYESSKK---YPNFDGSSIFPKYDDFPQDANIMAIWGHFIRV 208
Query: 61 GRFVTRRFVFEAKAIVDLKAKATSSSVQHPTRVEVVSAILSKCIMTAVKTKTGS-HKPTL 119
+ TR FVF I LK K SS V++P+RVEVVSA+LSK +M A + K+G KP
Sbjct: 209 KKMNTRSFVFNVSVIASLKEKVISSGVENPSRVEVVSALLSKNLMAAFRFKSGKDQKPFA 268
Query: 120 LTHAVNLRRKARPPLSAHLVGNIICHANTLCTDDEADLDGLVSLLREAITKPDADFVRSL 179
+ HAVN+ R+ P S +GN +C A+T+C+ E L LV L+EAI K D+ FV+++
Sbjct: 269 INHAVNVCRRMLSPFSECSMGNFVCLAHTICSQKETQLSSLVCQLKEAIVKIDSAFVKNI 328
Query: 180 QGAGGFRNYFQALKDEDEEYADVK-----DRITFTSSSSFGFYEIDFGWGKPIWVGLAG- 233
QG GG +++ KD + + D + FTS SFG Y +DFGWGKP+W+ AG
Sbjct: 329 QGDGGIIKFYEIAKDINGAFTSPAFSISVDYVMFTSWCSFGLYGVDFGWGKPVWITCAGS 388
Query: 234 FGGSIISFATTVVLMNTRLGDGIEAYVFLLEDYMNFLQVDKELLAFATLDPSPL 287
+G F VVLM+ R+ + IEA+V L E+ + L+ D+ELL +A L+P+PL
Sbjct: 389 YGNFEAPFMIYVVLMDGRINNEIEAWVVLDEETIVILEKDEELLEYAALNPTPL 442
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255578621|ref|XP_002530172.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223530333|gb|EEF32227.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255539124|ref|XP_002510627.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223551328|gb|EEF52814.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224061883|ref|XP_002300646.1| predicted protein [Populus trichocarpa] gi|222842372|gb|EEE79919.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255566100|ref|XP_002524038.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223536765|gb|EEF38406.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255584551|ref|XP_002533002.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223527213|gb|EEF29377.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356536997|ref|XP_003537018.1| PREDICTED: vinorine synthase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|359492333|ref|XP_002284817.2| PREDICTED: vinorine synthase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|351721226|ref|NP_001238226.1| uncharacterized protein LOC100305374 [Glycine max] gi|245053180|gb|ACS94570.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255547850|ref|XP_002514982.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223546033|gb|EEF47536.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 288 | ||||||
| TAIR|locus:2092090 | 442 | AT3G26040 [Arabidopsis thalian | 0.961 | 0.626 | 0.336 | 8.9e-38 | |
| TAIR|locus:2024036 | 435 | AT1G24430 [Arabidopsis thalian | 0.906 | 0.6 | 0.328 | 2e-31 | |
| TAIR|locus:2024061 | 436 | AT1G24420 [Arabidopsis thalian | 0.951 | 0.628 | 0.304 | 1.8e-30 | |
| TAIR|locus:2130065 | 446 | AT4G15390 [Arabidopsis thalian | 0.944 | 0.609 | 0.322 | 3.1e-28 | |
| TAIR|locus:2152783 | 426 | AT5G47950 [Arabidopsis thalian | 0.923 | 0.624 | 0.329 | 3.1e-28 | |
| TAIR|locus:2102936 | 443 | AT3G30280 [Arabidopsis thalian | 0.944 | 0.613 | 0.309 | 2.8e-27 | |
| TAIR|locus:2130075 | 435 | BIA1 "BRASSINOSTEROID INACTIVA | 0.958 | 0.634 | 0.286 | 4.5e-27 | |
| TAIR|locus:2152763 | 443 | AT5G47980 [Arabidopsis thalian | 0.975 | 0.634 | 0.304 | 1.3e-26 | |
| TAIR|locus:2178667 | 428 | AT5G23970 [Arabidopsis thalian | 0.937 | 0.630 | 0.288 | 1.1e-19 | |
| TAIR|locus:2074790 | 443 | AT3G50280 [Arabidopsis thalian | 0.913 | 0.593 | 0.256 | 8.8e-09 |
| TAIR|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 97/288 (33%), Positives = 156/288 (54%)
Query: 2 IGDGTTFSSFMKSWAATARKTLEEAVCRPSFDASSLFPPRDAYPREATAKAQFARFKKTG 61
+ D T+ FMKSWAA + + + + P FD +FPP + + + A
Sbjct: 153 LADATSIGLFMKSWAAISSRGSIKTIGAPVFDTVKIFPPGN-FSETSPAPVVEPEIMMN- 210
Query: 62 RFVTRRFVFEAKAIVDLKAKATSSSVQHPTRVEVVSAILSKCIMTAVKTKTGSHKPTLLT 121
+ +++RF+F++ +I L+AKA+S V PTRVE VSA++ K M A +T +G+ KP++L
Sbjct: 211 QTLSKRFIFDSSSIQALQAKASSFEVNQPTRVEAVSALIWKSAMKATRTVSGTSKPSILA 270
Query: 122 HAVNLRRKARPPLSAHLVGNIICHANTLCTD--DEADLDGLVSLLREAITKPDADFVRSL 179
++V+LR + PP + + +GN++ + + ++ L LVS +R+A + + L
Sbjct: 271 NSVSLRSRVSPPFTKNSIGNLVSYFAAKAEEGINQTKLQTLVSKIRKAKQRFRDIHIPKL 330
Query: 180 QGAGGFRNYFQALKDE--DEEYADVKDRITFTSSSSFGFYEIDFGWGKPIWVGLAGFGGS 237
G + + E D + D F+S+ FG YE DFGWGKP+WVG
Sbjct: 331 VGNPNATEIICSYQKEAGDMIASGDFDFYIFSSACRFGLYETDFGWGKPVWVGFPS---- 386
Query: 238 IISFATTVVLMNTRLGDGIEAYVFLLEDYMNFLQVDKELLAFATLDPS 285
+ V L++T+ GIEA+V L E MN + D+ELL FA+L+PS
Sbjct: 387 -VRQKNIVTLLDTKEAGGIEAWVNLNEQEMNLFEQDRELLQFASLNPS 433
|
|
| TAIR|locus:2024036 AT1G24430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024061 AT1G24420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130065 AT4G15390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152783 AT5G47950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2102936 AT3G30280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130075 BIA1 "BRASSINOSTEROID INACTIVATOR1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178667 AT5G23970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2074790 AT3G50280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00020091 | hypothetical protein (449 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 288 | |||
| PLN00140 | 444 | PLN00140, PLN00140, alcohol acetyltransferase fami | 2e-73 | |
| pfam02458 | 432 | pfam02458, Transferase, Transferase family | 3e-36 | |
| PLN02481 | 436 | PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul | 3e-16 | |
| PLN03157 | 447 | PLN03157, PLN03157, spermidine hydroxycinnamoyl tr | 4e-06 |
| >gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 2e-73
Identities = 109/286 (38%), Positives = 167/286 (58%), Gaps = 5/286 (1%)
Query: 2 IGDGTTFSSFMKSWAATARKTLEEAVCRPSFDASSLFPPRDAYPREATAKAQFARFKKTG 61
I D T S+F+ SWAA R E + F+ASS FPP +++P + + F K
Sbjct: 158 IIDAATASAFLDSWAANTRGHYSEVINPDLFEASSFFPPLNSFPVQFLLLMEENWFFKEN 217
Query: 62 RFVTRRFVFEAKAIVDLKAKATSSSVQHPTRVEVVSAILSKCIMTAVKTKTGSHKPTLLT 121
++T+RFVF+AKAI L+AKA S V +P+R+E +S + KC A ++ + + +P++
Sbjct: 218 -YITKRFVFDAKAIATLRAKAKSKRVPNPSRIETLSCFIWKCCTAASRSISAAPRPSISV 276
Query: 122 HAVNLRRKARPPLSAHLVGNIICHANTLC--TDDEADLDGLVSLLREAITKPDADFVRSL 179
HAVN+R++ +PP+S + +GN+ A D + +L+ LVSL RE+I ++D+++SL
Sbjct: 277 HAVNIRQRTKPPMSRYSIGNLFWWALAAADPADTKIELNELVSLTRESIANYNSDYLKSL 336
Query: 180 QGAGGFRNYFQALKDEDEEYADVKDRITFTSSSSFGFYEIDFGWGKPIWVGLAGFGGSII 239
QG G + L +++ + F+S +FG ++DFGWGKPIWVGL G G
Sbjct: 337 QGENGLEGMSEYLNQLVGIFSEEPEIFLFSSWLNFGLNDVDFGWGKPIWVGLLGEVGP-- 394
Query: 240 SFATTVVLMNTRLGDGIEAYVFLLEDYMNFLQVDKELLAFATLDPS 285
+F V T +GIEA++ L E M L+ D E LAFAT +PS
Sbjct: 395 AFRNLTVFKETGDNNGIEAWITLDEKIMAILERDPEFLAFATPNPS 440
|
Length = 444 |
| >gnl|CDD|217048 pfam02458, Transferase, Transferase family | Back alignment and domain information |
|---|
| >gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 288 | |||
| PLN00140 | 444 | alcohol acetyltransferase family protein; Provisio | 100.0 | |
| PLN03157 | 447 | spermidine hydroxycinnamoyl transferase; Provision | 100.0 | |
| PLN02481 | 436 | Omega-hydroxypalmitate O-feruloyl transferase | 100.0 | |
| PLN02663 | 431 | hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn | 100.0 | |
| PF02458 | 432 | Transferase: Transferase family; InterPro: IPR0034 | 100.0 | |
| PRK09294 | 416 | acyltransferase PapA5; Provisional | 98.47 | |
| PF07247 | 480 | AATase: Alcohol acetyltransferase; InterPro: IPR01 | 97.5 | |
| COG4908 | 439 | Uncharacterized protein containing a NRPS condensa | 97.08 | |
| TIGR02946 | 446 | acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b | 92.4 | |
| PF00668 | 301 | Condensation: Condensation domain; InterPro: IPR00 | 91.78 |
| >PLN00140 alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-56 Score=416.55 Aligned_cols=279 Identities=37% Similarity=0.627 Sum_probs=220.0
Q ss_pred CcchHhHHHHHHHHHHHHHhcCCcCCCCCCccccc-ccCCCCCCCCCchhhhhhhhccccCCCeeEEEEEEcHHHHHHHH
Q 023048 1 MIGDGTTFSSFMKSWAATARKTLEEAVCRPSFDAS-SLFPPRDAYPREATAKAQFARFKKTGRFVTRRFVFEAKAIVDLK 79 (288)
Q Consensus 1 ~v~Dg~~~~~fl~~Wa~~~rg~~~~~~~~P~~dr~-~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk 79 (288)
.++||.|+++||++||++|||.. .+...|++||. .+.+++..+....... .........++++++|+|++++|++||
T Consensus 157 ~v~Dg~s~~~Fl~~WA~~~rg~~-~~~~~P~~dr~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~v~~~f~fs~~~I~~LK 234 (444)
T PLN00140 157 KIIDAATASAFLDSWAANTRGHY-SEVINPDLFEASSFFPPLNSFPVQFLLL-MEENWFFKENYITKRFVFDAKAIATLR 234 (444)
T ss_pred EcccHHHHHHHHHHHHHHhcCCC-CCCCCcccccccccCCCCCccccccccc-ccccccccCceEEEEEEECHHHHHHHH
Confidence 47999999999999999999975 44578999996 4555543221110000 001112335789999999999999999
Q ss_pred HHhccCCCCCCchHHHHHHHHHHHHHHhhcccCCCCCceEEEEEeccccccCCCCCcccccceeeeecccccCCC--CCh
Q 023048 80 AKATSSSVQHPTRVEVVSAILSKCIMTAVKTKTGSHKPTLLTHAVNLRRKARPPLSAHLVGNIICHANTLCTDDE--ADL 157 (288)
Q Consensus 80 ~~a~~~~~~~~S~~d~l~A~iW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~p~lp~~y~GN~~~~~~~~~~~~e--~~l 157 (288)
+++.++...++|++|+|+||+|+|+++|++...+.++.+.+.++||+|+|++||||++||||++..+.+.++++| .+|
T Consensus 235 ~~~~~~~~~~~S~~e~vsA~iWr~~~rA~~~~~~~~~~~~~~~~vn~R~Rl~PpLP~~y~GN~i~~~~~~~~~~~~~~~l 314 (444)
T PLN00140 235 AKAKSKRVPNPSRIETLSCFIWKCCTAASRSISAAPRPSISVHAVNIRQRTKPPMSRYSIGNLFWWALAAADPADTKIEL 314 (444)
T ss_pred HhcccccCCCCchhHHHHHHHHHHHHHHhhhccCCCCceEEEEEEeccccCCCCCCcccccchhhhheecccccccccch
Confidence 999765445799999999999999999965422224689999999999999999999999999999988887776 789
Q ss_pred HHHHHHHHHHhhCcchhHHhhhccCcchHhHHHHHhhhhhhc-cCCCCeEEEeccCCCCccccccCCCceeeeeecCC--
Q 023048 158 DGLVSLLREAITKPDADFVRSLQGAGGFRNYFQALKDEDEEY-ADVKDRITFTSSSSFGFYEIDFGWGKPIWVGLAGF-- 234 (288)
Q Consensus 158 ~~~a~~iR~ai~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~tsw~~~~~y~~DFG~G~P~~~~~~~~-- 234 (288)
.++|.+||+++.+++++|+++.+++..+ +.+.++++..... ....+.+.+|||+||++|++|||||||+++++...
T Consensus 315 ~~~a~~Ir~~i~~~~~e~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~ye~DFGwGkP~~v~~~~~~~ 393 (444)
T PLN00140 315 NELVSLTRESIANYNSDYLKSLQGENGL-EGMSEYLNQLVGIFSEEPEIFLFSSWLNFGLNDVDFGWGKPIWVGLLGEVG 393 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhH-HHHHHHHHHHhhcccCCCceEEecccccCCccccccCCCCceeeecccccC
Confidence 9999999999999999999998874221 1111233322221 12344568999999999999999999999998742
Q ss_pred CCcccccccEEEEeeCCCCCeEEEEEEcCHhHHHHhccchhhhhhhcCCCCC
Q 023048 235 GGSIISFATTVVLMNTRLGDGIEAYVFLLEDYMNFLQVDKELLAFATLDPSP 286 (288)
Q Consensus 235 ~~~~~~~~g~v~l~p~~~~~g~~v~v~L~~~~m~~l~~d~~~~~~~~~~~~~ 286 (288)
.. ++|+++++++++++|++|+|+|++++|++|++|+||++|++.||++
T Consensus 394 ~~----~~~~~~l~~~~~~~giev~v~L~~~~M~~f~~d~e~l~~~~~~~~~ 441 (444)
T PLN00140 394 PA----FRNLTVFKETGDNNGIEAWITLDEKIMAILERDPEFLAFATPNPSI 441 (444)
T ss_pred Cc----ccceEEEEecCCCCeEEEEEecCHHHHHHHhhCHHHHhhcCCCCCC
Confidence 12 2689999999877899999999999999999999999999999974
|
|
| >PLN03157 spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >PLN02481 Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes | Back alignment and domain information |
|---|
| >PRK09294 acyltransferase PapA5; Provisional | Back alignment and domain information |
|---|
| >PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 | Back alignment and domain information |
|---|
| >COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT | Back alignment and domain information |
|---|
| >PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 288 | ||||
| 2bgh_A | 421 | Crystal Structure Of Vinorine Synthase Length = 421 | 2e-27 | ||
| 4g0b_A | 436 | Structure Of Native Hct From Coffea Canephora Lengt | 5e-05 | ||
| 2e1t_A | 454 | Crystal Structure Of Dendranthema Morifolium Dmat C | 6e-05 | ||
| 4g2m_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 6e-05 | ||
| 4g22_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 7e-05 | ||
| 2e1v_A | 454 | Crystal Structure Of Dendranthema Morifolium Dmat, | 1e-04 | ||
| 2xr7_A | 453 | Crystal Structure Of Nicotiana Tabacum Malonyltrans | 2e-04 |
| >pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 | Back alignment and structure |
|
| >pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 | Back alignment and structure |
| >pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat Complexed With Malonyl-coa Length = 454 | Back alignment and structure |
| >pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 | Back alignment and structure |
| >pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 | Back alignment and structure |
| >pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno- Methionine Derivative Length = 454 | Back alignment and structure |
| >pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase (Ntmat1) Complexed With Malonyl-Coa Length = 453 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 288 | |||
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 6e-58 | |
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 5e-51 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 3e-46 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 3e-44 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 4e-44 |
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 | Back alignment and structure |
|---|
Score = 190 bits (483), Expect = 6e-58
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 29/287 (10%)
Query: 1 MIGDGTTFSSFMKSWAATARKTLEEAVCRPSFDASSLFPPRDAYPREATAKAQFARFKKT 60
I D + ++F+ +W AT R E + P+FD ++ P
Sbjct: 161 KIADVLSLATFLNAWTATCRG--ETEIVLPNFDLAARHFPPVDNTPSPE-------LVPD 211
Query: 61 GRFVTRRFVFEAKAIVDLKAKATSSSV-QHPTRVEVVSAILSKCIMTAVKTKTGSHKPTL 119
V +RFVF+ + I L+A+A+S+S ++ +RV++V A + K ++ + K G+ +
Sbjct: 212 ENVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFV 271
Query: 120 LTHAVNLRRKARPPLSAHLVGNIICHANTLCTD-DEADLDGLVSLLREAITKPDADFVRS 178
+ AVNLR + PPL + +GNI + D L+ LR ++ K + D
Sbjct: 272 VVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDKDFPDLIGPLRTSLEKTEDDHNHE 331
Query: 179 LQGAGGFRNYFQALKDEDEEYADVKDRITFTSSSSFGFYEIDFGWGKPIWVGLAGFGGSI 238
L L+ ++ ++FTS GFY++DFGWGKP+ F
Sbjct: 332 LL---KGMTCLYELEP--------QELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRN 380
Query: 239 ISFATTVVLMNTRLGDGIEAYVFLLEDYMNFLQVDKELLAFATLDPS 285
+LM+TR GDG+EA++ + ED M L ELL+ D S
Sbjct: 381 A-----ALLMDTRSGDGVEAWLPMAEDEMAMLP--VELLSLVDSDFS 420
|
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 288 | |||
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 100.0 | |
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 100.0 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 100.0 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 100.0 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 100.0 | |
| 1q9j_A | 422 | PAPA5, polyketide synthase associated protein 5; c | 96.87 | |
| 3fot_A | 519 | 15-O-acetyltransferase; fusarium head blight, tric | 96.56 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 95.77 | |
| 1l5a_A | 436 | Amide synthase, VIBH; nonribosomal peptide synthet | 95.77 | |
| 2xhg_A | 466 | Tyrocidine synthetase A; isomerase, nonribosomal p | 95.12 | |
| 4hvm_A | 493 | Tlmii; PSI-biology, midwest center for structural | 93.18 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 91.97 |
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-53 Score=393.40 Aligned_cols=256 Identities=33% Similarity=0.537 Sum_probs=213.8
Q ss_pred CcchHhHHHHHHHHHHHHHhcCCcCCCCCCcccc-cccCCC-CCCCCCchhhhhhhhccccCCCeeEEEEEEcHHHHHHH
Q 023048 1 MIGDGTTFSSFMKSWAATARKTLEEAVCRPSFDA-SSLFPP-RDAYPREATAKAQFARFKKTGRFVTRRFVFEAKAIVDL 78 (288)
Q Consensus 1 ~v~Dg~~~~~fl~~Wa~~~rg~~~~~~~~P~~dr-~~l~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~L 78 (288)
.++||.|+++||++||++|||.. .. .+|++|| +.+.++ +++|. . ......++++++|+|++++|++|
T Consensus 161 ~v~Dg~~~~~fl~~wa~~~rg~~-~~-~~P~~dr~~~l~p~~~~~~~-~--------~~~~~~~~~~~~f~f~~~~i~~L 229 (421)
T 2bgh_A 161 KIADVLSLATFLNAWTATCRGET-EI-VLPNFDLAARHFPPVDNTPS-P--------ELVPDENVVMKRFVFDKEKIGAL 229 (421)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTCS-CC-CCCBCSHHHHHSCCCTTCCC-C--------CCCCCSSEEEEEEEECHHHHHHH
T ss_pred EechHHHHHHHHHHHHHHhcCCC-CC-CCCccccccccCCCcccCCC-C--------ccCCccceEEEEEEECHHHHHHH
Confidence 37999999999999999999975 33 6899999 777665 44443 1 11234578999999999999999
Q ss_pred HHHhccCCC-CCCchHHHHHHHHHHHHHHhhcccCCCCCceEEEEEeccccccCCCCCcccccceeeeecccccCCC-CC
Q 023048 79 KAKATSSSV-QHPTRVEVVSAILSKCIMTAVKTKTGSHKPTLLTHAVNLRRKARPPLSAHLVGNIICHANTLCTDDE-AD 156 (288)
Q Consensus 79 k~~a~~~~~-~~~S~~d~l~A~iW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~p~lp~~y~GN~~~~~~~~~~~~e-~~ 156 (288)
|+++.++.. .++|+||+|+||+|+|+++||....+.++++.+.++||+|+|++||+|++||||++..+.+.+++++ .+
T Consensus 230 K~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~~~~ 309 (421)
T 2bgh_A 230 RAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDKD 309 (421)
T ss_dssp HHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTCCCC
T ss_pred HHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEeccccccc
Confidence 999986543 5799999999999999999987643335789999999999999999999999999999999888876 89
Q ss_pred hHHHHHHHHHHhhCcchhHHhhhccCcchHhHHHHHhhhhhhccCCCCeEEEeccCCCCccccccCCCceeeeeecCCCC
Q 023048 157 LDGLVSLLREAITKPDADFVRSLQGAGGFRNYFQALKDEDEEYADVKDRITFTSSSSFGFYEIDFGWGKPIWVGLAGFGG 236 (288)
Q Consensus 157 l~~~a~~iR~ai~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~tsw~~~~~y~~DFG~G~P~~~~~~~~~~ 236 (288)
|+++|.+||++|.+++++|+++..+ +.+..... ...+.+.+|||++|++|++|||||||+++++...+.
T Consensus 310 l~~~a~~ir~ai~~~~~~~~~~~~~----------~~~~~~~~-~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~ 378 (421)
T 2bgh_A 310 FPDLIGPLRTSLEKTEDDHNHELLK----------GMTCLYEL-EPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPK 378 (421)
T ss_dssp GGGGHHHHHHHTCCCSSCHHHHHHH----------HHHHHHTS-CGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHhhcc-CCCCeEEEeccccCCCcccccCCCccCeecccccCc
Confidence 9999999999999999988886443 22221111 223469999999999999999999999999877654
Q ss_pred cccccccEEEEeeCCCCCeEEEEEEcCHhHHHHhccchhhhhhhcCCCC
Q 023048 237 SIISFATTVVLMNTRLGDGIEAYVFLLEDYMNFLQVDKELLAFATLDPS 285 (288)
Q Consensus 237 ~~~~~~g~v~l~p~~~~~g~~v~v~L~~~~m~~l~~d~~~~~~~~~~~~ 285 (288)
+|.++++|+++++|++|.|+|++++|++|++ ||++|+++||+
T Consensus 379 -----~g~~~~~p~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~~~~~ 420 (421)
T 2bgh_A 379 -----RNAALLMDTRSGDGVEAWLPMAEDEMAMLPV--ELLSLVDSDFS 420 (421)
T ss_dssp -----TTEEEEEECTTSSSEEEEEEEEHHHHHHSCH--HHHTTBCCCCC
T ss_pred -----CCEEEEEecCCCCeEEEEEEcCHHHHHHHHH--HHHHhhcCCCC
Confidence 7999999999888999999999999999988 99999999997
|
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A | Back alignment and structure |
|---|
| >1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* | Back alignment and structure |
|---|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
| >1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} | Back alignment and structure |
|---|
| >4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} | Back alignment and structure |
|---|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 288 | |||
| d1q9ja2 | 238 | Polyketide synthase associated protein 5, PapA5 {M | 97.56 | |
| d1l5aa2 | 250 | VibH {Vibrio cholerae [TaxId: 666]} | 82.35 |
| >d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: NRPS condensation domain (amide synthase) domain: Polyketide synthase associated protein 5, PapA5 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.56 E-value=0.0005 Score=55.40 Aligned_cols=102 Identities=21% Similarity=0.192 Sum_probs=79.1
Q ss_pred eeEEEEEEcHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHhhcccCCCCCceEEEEEeccccccCCCCCcccccce
Q 023048 63 FVTRRFVFEAKAIVDLKAKATSSSVQHPTRVEVVSAILSKCIMTAVKTKTGSHKPTLLTHAVNLRRKARPPLSAHLVGNI 142 (288)
Q Consensus 63 ~~~~~f~f~~~~i~~Lk~~a~~~~~~~~S~~d~l~A~iW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~p~lp~~y~GN~ 142 (288)
.....+.++++.-++|++.|.+. .+|.+.++.|-+=..+.+-.+. + +....+..+++.|+++.|+..++.+||.
T Consensus 31 ~~~~~~~ls~~~t~~l~~~~~~~---~~T~~~~l~aa~~~~l~~~~~~-~--~~~~~~~~~~~~r~~~~~~~~~~~~G~~ 104 (238)
T d1q9ja2 31 VPVTRLWLSKQQTSDLMAFGREH---RLSLNAVVAAAILLTEWQLRNT-P--HVPIPYVYPVDLRFVLAPPVAPTEATNL 104 (238)
T ss_dssp CCEEEECCCHHHHHHHHHHHTTT---TCCHHHHHHHHHHHHHHHHHTC-S--SCCEEEEEEEETTTTSSSCCCTTTBSCC
T ss_pred CceEEEEeCHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHhCC-C--CccccccccccccccccCccccceeEee
Confidence 34556799999999999999864 6889998888644444443322 1 3567889999999999988888899999
Q ss_pred eeeecccccCCC-CChHHHHHHHHHHhhC
Q 023048 143 ICHANTLCTDDE-ADLDGLVSLLREAITK 170 (288)
Q Consensus 143 ~~~~~~~~~~~e-~~l~~~a~~iR~ai~~ 170 (288)
+........... .++.++++.+++.+..
T Consensus 105 ~~~~~~r~~~~~~~~~~~l~~~v~~~l~~ 133 (238)
T d1q9ja2 105 LGAASYLAEIGPNTDIVDLASDIVATLRA 133 (238)
T ss_dssp EEEEEEEECCCSSCCHHHHHHHHHHHHHH
T ss_pred eeeEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 888777776654 7899999999988765
|
| >d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|