Citrus Sinensis ID: 023054

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASKTSA
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHccccccEEEEccccccccccccccccccHHcccccHHHHHHHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcccccEEEEEEcHccHHHHHHHHHHHHHccccccEEEEccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcHHHEEcccccccHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccEcccHHcccHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccEccccccccccHHcccHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
mlaggasgigLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFialnlplnilinnagimfcpyqisedgiEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAhqytykggirfqkindragysdkkaygqsKLANILHANELSRRFQeegvnitansvhpglimTNLFKHSAVVMRFLKFFSFFlwknvpqgaaTTCYValhpnlkgvtgkyfldcnemppsalARDETLAKKLWDFSNKMINSASKTSA
Flexible Loop (DISEMBL)
mlaggasgigLETARVLALRKAHVIIAARNMAAANEARQLilkeddtarVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASKTSA
Low Complexity Region (SEG)
MLAGGASGIGLETARVLALRKAHVIIaarnmaaanearQLILKEDDTARVDTLKLDLSSIASIKDFAQNFialnlplnilinnagiMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASKTSA
Disordered region (IsUnstruct)
********IGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEMP**ALARDETLAKKLWDF*************
Disordered Region (DISOPRED)
MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEMPPSA*ARDETLAKKLWDFSNKM**S******
Disordered Region (DISEMBL)
MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMI********
Disordered Region (DISPRO)
MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINS******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASKTSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	288	2.2.26 [Sep-21-2011]
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.972	0.886	0.585	3e-96
A2RVM0	322	Short-chain dehydrogenase	no	no	1.0	0.894	0.543	2e-92
Q8BYK4	316	Retinol dehydrogenase 12	yes	no	0.934	0.851	0.421	2e-51
Q91WL8	414	WW domain-containing oxid	no	no	0.951	0.661	0.388	3e-51
Q9NZC7	414	WW domain-containing oxid	yes	no	0.951	0.661	0.402	5e-51
Q5R9W5	414	WW domain-containing oxid	yes	no	0.951	0.661	0.398	8e-51
Q5F389	414	WW domain-containing oxid	no	no	0.944	0.657	0.405	2e-50
Q8TC12	318	Retinol dehydrogenase 11	no	no	0.920	0.833	0.426	2e-48
P59837	316	Retinol dehydrogenase 12	no	no	0.937	0.854	0.409	6e-48
Q9ERI6	334	Retinol dehydrogenase 14	no	no	0.940	0.811	0.397	2e-47

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  351 bits (901), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 164/280 (58%), Positives = 215/280 (76%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G +SGIG ET RVLALR AHVI+  RNM AA + +  ILK+  +A+VD ++LDLSS+
Sbjct: 34  IVTGASSGIGAETTRVLALRGAHVIMGVRNMVAAKDVKDTILKDIPSAKVDAIELDLSSL 93

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S+K FA  F +   PLNILINNAGIM CP+++S+D IE+QFATNHIGHFLLTNLLLDTM
Sbjct: 94  DSVKKFASEFNSSGRPLNILINNAGIMACPFKLSKDNIELQFATNHIGHFLLTNLLLDTM 153

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            +T +E+  EGRIVN++S AH++ Y  GIRF KIND++ Y++ +AYGQSKLAN+LHAN+L
Sbjct: 154 KKTTRESKKEGRIVNVASEAHRFAYPEGIRFDKINDQSSYNNWRAYGQSKLANVLHANQL 213

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           ++  +E+GVNITANS+HPG I+TNLF+H++ V   +      + KNV QGAATTCYVALH
Sbjct: 214 TKHLKEDGVNITANSLHPGTIVTNLFRHNSAVNGLINVIGKLVLKNVQQGAATTCYVALH 273

Query: 241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMI 280
           P +KGV+G+YF D N    +   +D  LAKKLWDFS  ++
Sbjct: 274 PQVKGVSGEYFSDSNVYKTTPHGKDVDLAKKLWDFSINLV 313

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.
Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  338 bits (867), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 157/289 (54%), Positives = 220/289 (76%), Gaps = 1/289 (0%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G +SGIG+ETARVL+LR  HV++A RN  +  + ++ I+K+   A++D ++LDLSS+
Sbjct: 33  IVTGASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSM 92

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S++ FA  + +  LPLN+LINNAGIM CP+ +S+D IE+QFATNH+GHFLLT LLLDTM
Sbjct: 93  QSVRKFASEYKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTM 152

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
             T++E+  EGRIVNLSS AH+++Y  G+RF KIND++ YS  +AYGQSKL N+LHANEL
Sbjct: 153 KSTSRESKREGRIVNLSSEAHRFSYPEGVRFDKINDKSSYSSMRAYGQSKLCNVLHANEL 212

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKH-SAVVMRFLKFFSFFLWKNVPQGAATTCYVAL 239
           +++ +E+GVNITANS+HPG IMTNL ++ +  +   +   + ++ K+VPQGAATTCYVAL
Sbjct: 213 TKQLKEDGVNITANSLHPGAIMTNLGRYFNPYLAVAVGAVAKYILKSVPQGAATTCYVAL 272

Query: 240 HPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASKTSA 288
           +P + GV+G+YF D N   P  L +D  LAKK+WDFS K+ +S S  S+
Sbjct: 273 NPQVAGVSGEYFQDSNIAKPLPLVKDTELAKKVWDFSTKLTDSQSGESS 321

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score =  202 bits (514), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/280 (42%), Positives = 171/280 (61%), Gaps = 11/280 (3%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  +GIG ETAR LA R A V IA R++     A   I  +   ++V   KLDLS  
Sbjct: 43  VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDLSDT 102

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            SI+ FA+ F+A    L+ILINNAG+M CPY  + DG E  F  NH+GHFLLT LLL+ +
Sbjct: 103 KSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGHFLLTYLLLERL 162

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
             +A       R+VNLSSIAH     G IRF  +  +  Y    AYG SKLAN+L   EL
Sbjct: 163 KESA-----PARVVNLSSIAHLI---GKIRFHDLQGQKRYCSAFAYGHSKLANLLFTREL 214

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           ++R Q  G  +TA +VHPG++++ + ++S ++    + FS F +K+  QGA T+ + AL 
Sbjct: 215 AKRLQ--GTGVTAYAVHPGVVLSEITRNSYLLCLLWRLFSPF-FKSTSQGAQTSLHCALA 271

Query: 241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMI 280
            +L+ ++GKYF DC  M  S+ AR++  A++LW+ S +++
Sbjct: 272 EDLEPLSGKYFSDCKRMWVSSRARNKKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score =  202 bits (513), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/286 (38%), Positives = 172/286 (60%), Gaps = 12/286 (4%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  SGIG ETA+  AL  AHVI+A RN++ A+EA   IL+E   A+V+ + LDL+ +
Sbjct: 128 LVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVSRILEEWHKAKVEAMTLDLAVL 187

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S++ FA+ F A N+ L++L+ NAG    P+ +++DG+E  F  NH+GHF L  LL D +
Sbjct: 188 RSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGLETTFQVNHLGHFYLVQLLQDVL 247

Query: 121 NRTAKETGIEGRIVNLSSIAHQYT----YKGGIRFQKIN-DRAGYSDKKAYGQSKLANIL 175
            R++       R++ +SS +H++T      G +   +++  R+ Y    AY +SKL NIL
Sbjct: 248 CRSSP-----ARVIVVSSESHRFTDINDSSGKLDLSRLSPPRSDYWAMLAYNRSKLCNIL 302

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC 235
            +NEL RR    GV  T+N+VHPG +M +    ++ V + L   +    K++ QGAATT 
Sbjct: 303 FSNELHRRLSPRGV--TSNAVHPGNMMYSAIHRNSWVYKLLFTLARPFTKSMQQGAATTV 360

Query: 236 YVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMIN 281
           Y A+ P L+G+ G YF +C    PS  A+ E  A+ LW+ S ++I 
Sbjct: 361 YCAVAPELEGLGGMYFNNCCRCLPSEEAQSEETARALWELSERLIQ 406

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1

 Score =  201 bits (511), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 115/286 (40%), Positives = 168/286 (58%), Gaps = 12/286 (4%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  SGIG ETA+  AL  AHVI+A RNMA A+EA   IL+E   A+V+ + LDL+ +
Sbjct: 128 VVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWHKAKVEAMTLDLALL 187

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S++ FA+ F A N+PL++L+ NA     P+ +++DG+E  F  NH+GHF L  LL D +
Sbjct: 188 RSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLETTFQVNHLGHFYLVQLLQDVL 247

Query: 121 NRTAKETGIEGRIVNLSSIAHQYT----YKGGIRFQKIND-RAGYSDKKAYGQSKLANIL 175
            R+A       R++ +SS +H++T      G + F +++  +  Y    AY +SKL NIL
Sbjct: 248 CRSAP-----ARVIVVSSESHRFTDINDSLGKLDFSRLSPTKNDYWAMLAYNRSKLCNIL 302

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC 235
            +NEL RR    GV  T+N+VHPG +M +    S  V   L   +    K++ QGAATT 
Sbjct: 303 FSNELHRRLSPRGV--TSNAVHPGNMMYSNIHRSWWVYTLLFTLARPFTKSMQQGAATTV 360

Query: 236 YVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMIN 281
           Y A  P L+G+ G YF +C    PS  A+ E  A+ LW  S ++I 
Sbjct: 361 YCAAVPELEGLGGMYFNNCCRCMPSPEAQSEETARTLWALSERLIQ 406

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. Required for normal bone development (By similarity). May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1

 Score =  201 bits (510), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 114/286 (39%), Positives = 168/286 (58%), Gaps = 12/286 (4%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  SGIG ETA+  AL  AHVI+A RNMA A+EA   IL+E   A+V+ + LDL+ +
Sbjct: 128 VVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWHKAKVEAVTLDLALL 187

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S++ FA+ F A N+PL++L+ NA     P+ +++DG+E  F  NH+GHF L  LL D +
Sbjct: 188 RSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLETTFQVNHLGHFYLVQLLQDVL 247

Query: 121 NRTAKETGIEGRIVNLSSIAHQYT----YKGGIRFQKIND-RAGYSDKKAYGQSKLANIL 175
            R+A       R++ +SS +H++T      G + F +++  +  Y    AY +SKL N+L
Sbjct: 248 CRSAP-----ARVIVVSSESHRFTDINDSLGKLDFSRLSPTKNDYWAMLAYNRSKLCNVL 302

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC 235
            +NEL RR    GV  T+N+VHPG +M +    S  V   L   +    K++ QGAATT 
Sbjct: 303 FSNELHRRLSPRGV--TSNAVHPGNMMYSNIHRSWWVYTLLFTLARPFTKSMQQGAATTV 360

Query: 236 YVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMIN 281
           Y A  P L+G+ G YF +C    PS  A+ E  A+ LW  S ++I 
Sbjct: 361 YCAAAPELEGLGGMYFNNCCRCMPSPEAQSEETARTLWALSERLIQ 406

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2

 Score =  199 bits (507), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/286 (40%), Positives = 173/286 (60%), Gaps = 14/286 (4%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  SGIG ETA+  AL  A+VI+A RNM+  N+A Q IL+E   A+V+ + LDL+S+
Sbjct: 128 IITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQRILEEWHKAKVEAMTLDLASL 187

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S+++FA+ F + N+PL+IL+ NA I    + ++EDG+E  F  NH+GHF L  LL D +
Sbjct: 188 RSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLESTFQVNHLGHFYLVQLLEDIL 247

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTY----KGGIRFQKIN-DRAGYSDKKAYGQSKLANIL 175
            R++       R+V +SS +H++T      G + F  ++  +  Y    AY +SKL NIL
Sbjct: 248 RRSSP-----ARVVVVSSESHRFTEIKDSSGKLDFSLLSPSKKEYWAMLAYNRSKLCNIL 302

Query: 176 HANELSRRFQEEGVNITANSVHPG-LIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATT 234
            +NEL+RR    GV  T+NSVHPG +I +++ ++  V          F  K++ QGAATT
Sbjct: 303 FSNELNRRLSPHGV--TSNSVHPGNMIYSSIHRNWWVYTLLFTLARPFT-KSMQQGAATT 359

Query: 235 CYVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMI 280
            Y A    L+G+ G YF +C    PSA AR+E  A  LW+ S ++I
Sbjct: 360 VYCATAAELEGLGGMYFNNCCRCLPSAEARNELTAVALWELSERLI 405

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8TC12|RDH11_HUMAN Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2

 Score =  192 bits (488), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/284 (42%), Positives = 169/284 (59%), Gaps = 19/284 (6%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA----RVDTLKLD 56
           ++ G  +GIG ETA+ LA R A V +A R++    E  +L+ KE  T     +V   KLD
Sbjct: 45  VVTGANTGIGKETAKELAQRGARVYLACRDV----EKGELVAKEIQTTTGNQQVLVRKLD 100

Query: 57  LSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLL 116
           LS   SI+ FA+ F+A    L++LINNAG+M CPY  + DG EM    NH+GHFLLT+LL
Sbjct: 101 LSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLL 160

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           L+ +  +A       RIVN+SS+AH   + G I F  +     Y+   AY  SKLANIL 
Sbjct: 161 LEKLKESAPS-----RIVNVSSLAH---HLGRIHFHNLQGEKFYNAGLAYCHSKLANILF 212

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCY 236
             EL+RR +  GV  T  SVHPG + + L +HS+ +      FSFF+ K   QGA T+ +
Sbjct: 213 TQELARRLKGSGV--TTYSVHPGTVQSELVRHSSFMRWMWWLFSFFI-KTPQQGAQTSLH 269

Query: 237 VALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMI 280
            AL   L+ ++G +F DC+    SA AR+ET+A++LWD S  ++
Sbjct: 270 CALTEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDLL 313

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score =  191 bits (485), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/281 (40%), Positives = 164/281 (58%), Gaps = 11/281 (3%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  +GIG ETAR LA R A V IA R++     A   I  +   ++V   KLDLS  
Sbjct: 43  VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLSDT 102

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            SI+ FA+ F+A    L+ILINNAG+M CPY  + DG E   A NH+GHFLLT+LLL  +
Sbjct: 103 KSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLLLGRL 162

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
             +A       R+VNLSS+AH     G IRF  +     Y+   AY  SKLAN+L   EL
Sbjct: 163 KESA-----PARVVNLSSVAHHL---GKIRFHDLQGDKYYNLGFAYCHSKLANVLFTREL 214

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           ++R +  G  +T  +VHPG++ + L +HS ++    + FS FL K   +GA T+ + AL 
Sbjct: 215 AKRLK--GTGVTTYAVHPGIVRSKLVRHSFLLCLLWRLFSPFL-KTTWEGAQTSLHCALA 271

Query: 241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMIN 281
             L+ ++GKYF DC +   S  AR+   A++LW+ S +++ 
Sbjct: 272 EGLEPLSGKYFSDCKKTWVSPRARNNKTAERLWNVSCELLG 312

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1

 Score =  189 bits (480), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/294 (39%), Positives = 167/294 (56%), Gaps = 23/294 (7%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE---------DDT-ARV 50
           ++ G  SG+G  TA  L    A VI+  R+ A A EA   + +E         D T  ++
Sbjct: 48  LITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGTDGQL 107

Query: 51  DTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHF 110
              +LDL+S+ S++ F Q  +     L++LINNAG+  CPY  +EDG EMQF  NH+GHF
Sbjct: 108 VVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFGVNHLGHF 167

Query: 111 LLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK 170
           LLTNLLL  +  +A       RIV +SS  ++Y   G I F+ +N    Y+    Y +SK
Sbjct: 168 LLTNLLLGLLKSSAPS-----RIVVVSSKLYKY---GEINFEDLNSEQSYNKSFCYSRSK 219

Query: 171 LANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLW---KNV 227
           LANIL   EL+RR   EG N+T N +HPG++ TNL +H  + +     F+   W   K  
Sbjct: 220 LANILFTRELARRL--EGTNVTVNVLHPGIVRTNLGRHIHIPLLARPLFNLVSWAFFKTP 277

Query: 228 PQGAATTCYVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMIN 281
            +GA T+ Y+A  P+++GV+G+YF DC E      A DE++A+KLWD S  M+ 
Sbjct: 278 LEGAQTSIYLACSPDVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVG 331

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	288
224090667	322	predicted protein [Populus trichocarpa]	0.989	0.885	0.814	1e-138
358346920	323	Retinol dehydrogenase [Medicago truncatu	0.993	0.885	0.744	1e-130
356548140	323	PREDICTED: retinol dehydrogenase 12-like	0.989	0.882	0.764	1e-129
255581054	322	short-chain dehydrogenase, putative [Ric	0.989	0.885	0.764	1e-129
359807328	323	uncharacterized protein LOC100795299 [Gl	0.989	0.882	0.764	1e-129
356505114	323	PREDICTED: retinol dehydrogenase 12-like	0.989	0.882	0.743	1e-128
356572339	323	PREDICTED: WW domain-containing oxidored	0.989	0.882	0.743	1e-128
357510421	324	Retinol dehydrogenase [Medicago truncatu	0.989	0.879	0.748	1e-128
388515071	324	unknown [Medicago truncatula]	0.989	0.879	0.748	1e-128
217071888	324	unknown [Medicago truncatula]	0.989	0.879	0.744	1e-127

>gi|224090667|ref|XP_002309049.1| predicted protein [Populus trichocarpa] gi|222855025|gb|EEE92572.1| predicted protein [Populus trichocarpa]

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 232/285 (81%), Positives = 257/285 (90%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGLET RVLAL KAHVIIAARNM AANEA+QLILKED+ ARVD LKLDLSSI
Sbjct: 37  LITGGASGIGLETTRVLALHKAHVIIAARNMVAANEAKQLILKEDEDARVDVLKLDLSSI 96

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            SI++FA N  +L+LPLNILINNAGIMFCPYQ+SEDGIEMQFATNH+GHFLLTNLLLD M
Sbjct: 97  KSIREFADNLNSLDLPLNILINNAGIMFCPYQLSEDGIEMQFATNHLGHFLLTNLLLDKM 156

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
             TA+ TG+EGRIVNLSS+AH +TYK GIRF  IND+  YSDK+AYGQSKLANILHA EL
Sbjct: 157 KETARTTGVEGRIVNLSSVAHIHTYKDGIRFNNINDKKRYSDKRAYGQSKLANILHAKEL 216

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           SRRFQEEGVNITAN+VHPGLIMTNLFKHSA++MR LKFFSFFLWKNVPQGAATTCYVALH
Sbjct: 217 SRRFQEEGVNITANAVHPGLIMTNLFKHSAILMRTLKFFSFFLWKNVPQGAATTCYVALH 276

Query: 241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
           P+LKGVTGKY++DCN + PSA ARDE LA+KLWDFSNK+I S SK
Sbjct: 277 PSLKGVTGKYYVDCNSLGPSAFARDEALARKLWDFSNKLITSVSK 321

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346920|ref|XP_003637512.1| Retinol dehydrogenase [Medicago truncatula] gi|355503447|gb|AES84650.1| Retinol dehydrogenase [Medicago truncatula]

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 213/286 (74%), Positives = 255/286 (89%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGLETARVLALRK HVIIAARNM +A EA+Q+IL+++++ARVD +KLDL S+
Sbjct: 38  IITGGASGIGLETARVLALRKVHVIIAARNMESAKEAKQIILQDNESARVDIMKLDLCSV 97

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S++ F +NF+AL+LPLNILINNAG+MFCP+Q+++DGIEMQFATNH+GHFLLTNLLL+ M
Sbjct: 98  KSVRSFVENFLALDLPLNILINNAGVMFCPFQLTQDGIEMQFATNHLGHFLLTNLLLEKM 157

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            +TAK TGIEGRI+NLSSIAH YTY+ GIR   IND+ GYSDKKAYGQSKLANILHANEL
Sbjct: 158 KQTAKATGIEGRIINLSSIAHTYTYEEGIRLDNINDQIGYSDKKAYGQSKLANILHANEL 217

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           SRR +EEGVNITANSVHPG+IMT L +HS+++M FLK F+F++WKNVPQGAATTCYVALH
Sbjct: 218 SRRLKEEGVNITANSVHPGVIMTPLMRHSSLLMNFLKMFTFYIWKNVPQGAATTCYVALH 277

Query: 241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASKT 286
           P+LKGVTGKYFLDCNE  PSA A +  L +KLWDFSNK+INS SK+
Sbjct: 278 PSLKGVTGKYFLDCNEFQPSAFASNGLLGRKLWDFSNKLINSISKS 323

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548140|ref|XP_003542461.1| PREDICTED: retinol dehydrogenase 12-like isoform 1 [Glycine max]

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/285 (76%), Positives = 247/285 (86%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGLETARVLA+RKAHVIIAARNM +A EA+QLIL+ED++ARVD +KLDL S+
Sbjct: 38  IITGGASGIGLETARVLAIRKAHVIIAARNMESAKEAKQLILEEDESARVDIMKLDLCSV 97

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S+  F  NFIAL +PLNILINNAG+MFCPYQ +EDGIEMQFATNH+GHFLLT LLLD M
Sbjct: 98  KSVGTFVDNFIALGVPLNILINNAGVMFCPYQQTEDGIEMQFATNHLGHFLLTKLLLDKM 157

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            +TAK+TGIEGRI+NLSSIAH YTY+ GIRF  IND  GYSDKKAYGQSKLANILH NEL
Sbjct: 158 KQTAKDTGIEGRIINLSSIAHVYTYEEGIRFDNINDEDGYSDKKAYGQSKLANILHTNEL 217

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           SRR Q EGVNITANSVHPG+IMT L +HS+++M FLK F+FF WKN+PQGAATTCYVALH
Sbjct: 218 SRRLQAEGVNITANSVHPGVIMTPLMRHSSLLMNFLKMFTFFAWKNIPQGAATTCYVALH 277

Query: 241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
           P+LKGVTGKYF DCNE  PS  A +E L +KLWDFSNKMINS SK
Sbjct: 278 PSLKGVTGKYFRDCNECQPSTHASNELLGRKLWDFSNKMINSLSK 322

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581054|ref|XP_002531343.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223529065|gb|EEF31050.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/285 (76%), Positives = 254/285 (89%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGLETARVLALRKAHVIIA+RN+ AANEA++LILK+ + ARVD LKLDL+SI
Sbjct: 37  IITGGASGIGLETARVLALRKAHVIIASRNLDAANEAKKLILKDHENARVDVLKLDLASI 96

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S+++FA NFIAL+LPLN+LINNAGIMFCPYQ+SEDGIE+QFATNHIGHFLLTNLLL+ M
Sbjct: 97  KSVREFADNFIALDLPLNLLINNAGIMFCPYQLSEDGIEIQFATNHIGHFLLTNLLLEKM 156

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
             TA+ TGIEGRIVNLSSIAH +TYKGGI F  +N++  YSDK+AYGQSKLANILHA EL
Sbjct: 157 KETARTTGIEGRIVNLSSIAHIHTYKGGILFDDLNNKRSYSDKRAYGQSKLANILHAKEL 216

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           +RRFQEEGVNITAN+VHPGLIMT L +HSA++MR L  FS  LWKNVPQGAATTCY ALH
Sbjct: 217 NRRFQEEGVNITANAVHPGLIMTPLMRHSALIMRILHIFSLPLWKNVPQGAATTCYAALH 276

Query: 241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
           P+LKG +GKYF+DCNE+ PSA ARD+ LA+KLWD+SNK+I SASK
Sbjct: 277 PSLKGASGKYFVDCNEIKPSAFARDDLLARKLWDYSNKLITSASK 321

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807328|ref|NP_001241121.1| uncharacterized protein LOC100795299 [Glycine max] gi|255636812|gb|ACU18739.1| unknown [Glycine max]

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/285 (76%), Positives = 247/285 (86%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGLETARVLA+RK HVIIAARNM +A EA+QLIL+ED++A VD +KLDL S+
Sbjct: 38  IITGGASGIGLETARVLAIRKVHVIIAARNMESAKEAKQLILQEDESACVDIMKLDLCSL 97

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S++ F  NFIAL LPLNILINNAG+MFCPYQ +EDGIEMQFATN++GHFLLTNLLLD M
Sbjct: 98  KSVRTFVDNFIALGLPLNILINNAGVMFCPYQQTEDGIEMQFATNYLGHFLLTNLLLDKM 157

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            +TAK+TGIEGRIVNLSSIAH YTY+ GIRF  IND  GY +KKAYGQSKLANILH NEL
Sbjct: 158 KQTAKDTGIEGRIVNLSSIAHLYTYEEGIRFDTINDEDGYHEKKAYGQSKLANILHTNEL 217

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           SRR Q EGVNITANSVHPG+IMT L +HS+++M FLK FSF +WKNVPQGAATTCYVALH
Sbjct: 218 SRRLQAEGVNITANSVHPGVIMTPLMRHSSLLMNFLKMFSFMIWKNVPQGAATTCYVALH 277

Query: 241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
           P+LKGVTGKY  DCNE PPSA A +E L +KLWDFSNKMINS SK
Sbjct: 278 PSLKGVTGKYLQDCNESPPSAHASNELLGRKLWDFSNKMINSLSK 322

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505114|ref|XP_003521337.1| PREDICTED: retinol dehydrogenase 12-like isoform 1 [Glycine max]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 212/285 (74%), Positives = 250/285 (87%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGLETARVLALRK HVIIA RNM +A EA+Q IL+E+++ARVD +KLDL S+
Sbjct: 38  IITGGASGIGLETARVLALRKVHVIIAVRNMVSAKEAKQQILEENESARVDIMKLDLCSV 97

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            SI+ F  NFIAL+LPLNILINNAG+MFCP+++SEDGIEMQFATNHIGHF L+NLLLD M
Sbjct: 98  NSIRSFVDNFIALDLPLNILINNAGVMFCPFKLSEDGIEMQFATNHIGHFHLSNLLLDKM 157

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            +TAK TGIEGRI+NLSSIAH YTY+ GIRF KIN+R GY +KKAYGQSKLANILH NEL
Sbjct: 158 KQTAKATGIEGRIINLSSIAHNYTYRKGIRFNKINERKGYGNKKAYGQSKLANILHTNEL 217

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           SRR QEEGVNITANSVHPG+IMT L +HS+ +M FLK F+F++WKNVPQGAATTCYVALH
Sbjct: 218 SRRLQEEGVNITANSVHPGVIMTPLMRHSSYLMHFLKVFTFYIWKNVPQGAATTCYVALH 277

Query: 241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
           P++KGVTGKYF+DCN+  PS+ A+++ LAKKLWDFSN +I S SK
Sbjct: 278 PSVKGVTGKYFVDCNQCKPSSHAKNKQLAKKLWDFSNDLIKSISK 322

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572339|ref|XP_003554326.1| PREDICTED: WW domain-containing oxidoreductase-like isoform 1 [Glycine max]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 212/285 (74%), Positives = 249/285 (87%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGLETARVLALRK HVIIA RNM +A EA+Q IL+E+++ARVD +KLDL S+
Sbjct: 38  IITGGASGIGLETARVLALRKVHVIIAVRNMVSAKEAKQQILEENESARVDVMKLDLCSV 97

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            SI  F  NFIAL+LPLNILINNAG+MFCP+++SEDGIEMQFATNH+GHF LTNLLLD M
Sbjct: 98  NSITSFVDNFIALDLPLNILINNAGVMFCPFKLSEDGIEMQFATNHLGHFHLTNLLLDKM 157

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            +TAK TGIEGRI+NLSSIAH YTY+ GIRF KIN+R GY +KKAYGQSKLANILH NEL
Sbjct: 158 QQTAKATGIEGRIINLSSIAHNYTYRKGIRFNKINERKGYGNKKAYGQSKLANILHTNEL 217

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           SRR QEEGVNITANSVHPG+IMT L +HS+ +M FLK F+F++WKNVPQGAATTCYVALH
Sbjct: 218 SRRLQEEGVNITANSVHPGVIMTPLMRHSSYLMHFLKVFTFYIWKNVPQGAATTCYVALH 277

Query: 241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
           P++KGVTGKYF+DCN+  PS+ A+++ LAKKLWDFSN +I S SK
Sbjct: 278 PSVKGVTGKYFVDCNQCKPSSHAKNKQLAKKLWDFSNDLIKSISK 322

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357510421|ref|XP_003625499.1| Retinol dehydrogenase [Medicago truncatula] gi|355500514|gb|AES81717.1| Retinol dehydrogenase [Medicago truncatula]

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 214/286 (74%), Positives = 250/286 (87%), Gaps = 1/286 (0%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGLET RVLALRK HVIIAARN+ +A EA+Q I +E+ +ARVD +KLDL S 
Sbjct: 38  IITGGASGIGLETTRVLALRKVHVIIAARNIESAEEAKQQITQENKSARVDIMKLDLCST 97

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S++ F  NFIAL+LPLNILINNAGIMFCP++ISE+GIEMQFATNH+GHFLLTNLLLD M
Sbjct: 98  KSVRSFVDNFIALDLPLNILINNAGIMFCPFKISEEGIEMQFATNHLGHFLLTNLLLDKM 157

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTY-KGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
            +TAK TGIEGRI+NLSSIAH+YTY + GI+F+KIND+ GYS KKAYGQSKLANILHANE
Sbjct: 158 KQTAKTTGIEGRIINLSSIAHRYTYFRKGIKFEKINDKKGYSSKKAYGQSKLANILHANE 217

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL 239
           LSRR QEEGVNIT NSVHPG+IMT L ++S+  M  LK FSF++WKNVPQGAATTCYVAL
Sbjct: 218 LSRRLQEEGVNITVNSVHPGVIMTPLMRYSSYTMHLLKIFSFYIWKNVPQGAATTCYVAL 277

Query: 240 HPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
           HP++KGVTGKYF+DCNE  PSA A+++ LAKKLWDFSNK+INS SK
Sbjct: 278 HPSVKGVTGKYFVDCNEFKPSAYAKNKLLAKKLWDFSNKLINSISK 323

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515071|gb|AFK45597.1| unknown [Medicago truncatula]

 Score =  462 bits (1188), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 214/286 (74%), Positives = 251/286 (87%), Gaps = 1/286 (0%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGLET RVLALRK HVIIAARN+ +A EA+Q I +E+ +ARVD +KLDL S 
Sbjct: 38  IITGGASGIGLETTRVLALRKVHVIIAARNIESAEEAKQQITQENKSARVDIMKLDLCST 97

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S++ F  NFIAL+LPLNILINNAGIMFCP++ISE+GIEMQFATNH+GHFLLTNLLLD M
Sbjct: 98  KSVRSFVDNFIALDLPLNILINNAGIMFCPFKISEEGIEMQFATNHLGHFLLTNLLLDKM 157

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTY-KGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
            +TAK TGIEGRI+NLSSIAH+YTY + GI+F+KIND+ G+S KKAYGQSKLANILHANE
Sbjct: 158 KQTAKTTGIEGRIINLSSIAHRYTYFRKGIKFEKINDKKGHSSKKAYGQSKLANILHANE 217

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL 239
           LSRR QEEGVNIT NSVHPG+IMT L ++S+  M  LKFFSF++WKNVPQGAATTCYVAL
Sbjct: 218 LSRRLQEEGVNITVNSVHPGVIMTPLMRYSSYTMHLLKFFSFYIWKNVPQGAATTCYVAL 277

Query: 240 HPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
           HP++KGVTGKYF+DCNE  PSA A+++ LAKKLWDFSNK+INS SK
Sbjct: 278 HPSVKGVTGKYFVDCNEFKPSAYAKNKLLAKKLWDFSNKLINSISK 323

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071888|gb|ACJ84304.1| unknown [Medicago truncatula]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/286 (74%), Positives = 250/286 (87%), Gaps = 1/286 (0%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGLET RVLALRK HVIIAARN+ +A EA+Q I +E+ +ARVD +KLDL S 
Sbjct: 38  IITGGASGIGLETTRVLALRKVHVIIAARNIESAEEAKQQITQENKSARVDIMKLDLCST 97

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S++ F  NFIAL+LPLNILINNAGIMFCP++ISE+GIEMQFATNH+GHFLLTNLLLD M
Sbjct: 98  KSVRSFVDNFIALDLPLNILINNAGIMFCPFKISEEGIEMQFATNHLGHFLLTNLLLDKM 157

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTY-KGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
            +TAK TGIEGRI+NLSSIAH+YTY + GI+F+KIND+ G+S KKAYGQSKLANILHANE
Sbjct: 158 KQTAKTTGIEGRIINLSSIAHRYTYFRKGIKFEKINDKKGHSSKKAYGQSKLANILHANE 217

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL 239
           LSRR QEEGVNIT NSVHPG+IMT L ++S+  M  LK FSF++WKNVPQGAATTCYVAL
Sbjct: 218 LSRRLQEEGVNITVNSVHPGVIMTPLMRYSSYTMHLLKIFSFYIWKNVPQGAATTCYVAL 277

Query: 240 HPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
           HP++KGVTGKYF+DCNE  PSA A+++ LAKKLWDFSNK+INS SK
Sbjct: 278 HPSVKGVTGKYFVDCNEFKPSAYAKNKLLAKKLWDFSNKLINSISK 323

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	288
TAIR|locus:2181778	331	AT5G02540 [Arabidopsis thalian	0.989	0.861	0.677	5.4e-102
TAIR|locus:2040676	321	AT2G37540 [Arabidopsis thalian	0.989	0.887	0.596	1.4e-89
TAIR|locus:2117969	322	Tic32-IVa "translocon at the i	1.0	0.894	0.494	7.5e-73
TAIR|locus:2123066	317	AT4G11410 [Arabidopsis thalian	0.968	0.880	0.498	2.9e-71
TAIR|locus:2134971	332	AT4G24050 [Arabidopsis thalian	0.993	0.861	0.439	3.3e-56
TAIR|locus:2019474	334	AT1G64590 [Arabidopsis thalian	0.989	0.853	0.404	1.3e-50
TAIR|locus:2170071	339	AT5G50130 [Arabidopsis thalian	0.972	0.825	0.401	3.6e-50
UNIPROTKB|E1BTL3	322	RDH12 "Uncharacterized protein	0.934	0.835	0.404	1e-45
ZFIN|ZDB-GENE-040718-9	320	rdh12 "retinol dehydrogenase 1	0.934	0.840	0.389	1.5e-44
ZFIN|ZDB-GENE-050522-387	298	zgc:112332 "zgc:112332" [Danio	0.934	0.902	0.380	3.5e-43

TAIR|locus:2181778 AT5G02540 [Arabidopsis thaliana (taxid:3702)]

 Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
 Identities = 193/285 (67%), Positives = 226/285 (79%)

Query:     1 MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
             ++ GG  GIG+ETARVL+ R AHV+I              IL+++  ARV  L+LDLSSI
Sbjct:    37 IITGGTGGIGMETARVLSKRGAHVVIGARNMGAAENAKTEILRQNANARVTLLQLDLSSI 96

Query:    61 ASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
              SIK F + F                MFCPYQ+SEDGIE+QFATNHIGHFLLTNLLLDTM
Sbjct:    97 KSIKAFVREFHALHLPLNLLINNAGVMFCPYQLSEDGIELQFATNHIGHFLLTNLLLDTM 156

Query:   121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
               TAK +G+EGRI+N+SS+AH YTY+ GI+F  IND   YSDK+AYGQSKLANILHANEL
Sbjct:   157 KNTAKTSGVEGRILNVSSVAHIYTYQEGIQFDSINDICSYSDKRAYGQSKLANILHANEL 216

Query:   181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
             SR+ QEEGVNITANSVHPGLI+TNLF+H+A++MRFLKFFSF+LWKN+PQGAATTCYVALH
Sbjct:   217 SRQLQEEGVNITANSVHPGLILTNLFQHTALLMRFLKFFSFYLWKNIPQGAATTCYVALH 276

Query:   241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
             P++KGVTGKYF DCNE+ PS LARDETLA+KLWDFS K+INS SK
Sbjct:   277 PSVKGVTGKYFADCNEVTPSKLARDETLAQKLWDFSVKLINSVSK 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2040676 AT2G37540 [Arabidopsis thaliana (taxid:3702)]

 Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
 Identities = 170/285 (59%), Positives = 211/285 (74%)

Query:     1 MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
             ++ GG SGIGLE ARVLA+R AHVII            ++IL+ +  ARVD L++D+SSI
Sbjct:    37 IITGGTSGIGLEAARVLAMRGAHVIIAARNPKAANESKEMILQMNPNARVDYLQIDVSSI 96

Query:    61 ASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
              S++ F   F                MFCP++++EDGIE QFATNHIGHFLLTNLLLD M
Sbjct:    97 KSVRSFVDQFLALNVPLNILINNAGVMFCPFKLTEDGIESQFATNHIGHFLLTNLLLDKM 156

Query:   121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
               TA+E+G++GRIVNLSSIAH YTY  GI+FQ IND AGYS+++AYGQSKL+N+LH+N L
Sbjct:   157 KSTARESGVQGRIVNLSSIAHTYTYSEGIKFQGINDPAGYSERRAYGQSKLSNLLHSNAL 216

Query:   181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
             SRR QEEGVNIT NSVHPGL+ TNLF++S   M+  +  +F  WKN+PQGAATTCYVALH
Sbjct:   217 SRRLQEEGVNITINSVHPGLVTTNLFRYSGFSMKVFRAMTFLFWKNIPQGAATTCYVALH 276

Query:   241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASK 285
             P+L+GVTGKYF DCN + PS  A + +LA KLWDFS  +I+S SK
Sbjct:   277 PDLEGVTGKYFGDCNIVAPSKFATNNSLADKLWDFSVFLIDSISK 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009860 "pollen tube growth" evidence=IEP

TAIR|locus:2117969 Tic32-IVa "translocon at the inner envelope membrane of chloroplasts 32-IVa" [Arabidopsis thaliana (taxid:3702)]

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 143/289 (49%), Positives = 201/289 (69%)

Query:     1 MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
             ++ G +SGIG+ETARVL+LR  HV++            + I+K+   A++D ++LDLSS+
Sbjct:    33 IVTGASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVKQVPGAKLDVMELDLSSM 92

Query:    61 ASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
              S++ FA  +                M CP+ +S+D IE+QFATNH+GHFLLT LLLDTM
Sbjct:    93 QSVRKFASEYKSTGLPLNLLINNAGIMACPFMLSKDNIELQFATNHLGHFLLTKLLLDTM 152

Query:   121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
               T++E+  EGRIVNLSS AH+++Y  G+RF KIND++ YS  +AYGQSKL N+LHANEL
Sbjct:   153 KSTSRESKREGRIVNLSSEAHRFSYPEGVRFDKINDKSSYSSMRAYGQSKLCNVLHANEL 212

Query:   181 SRRFQEEGVNITANSVHPGLIMTNLFKH-SAVVMRFLKFFSFFLWKNVPQGAATTCYVAL 239
             +++ +E+GVNITANS+HPG IMTNL ++ +  +   +   + ++ K+VPQGAATTCYVAL
Sbjct:   213 TKQLKEDGVNITANSLHPGAIMTNLGRYFNPYLAVAVGAVAKYILKSVPQGAATTCYVAL 272

Query:   240 HPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASKTSA 288
             +P + GV+G+YF D N   P  L +D  LAKK+WDFS K+ +S S  S+
Sbjct:   273 NPQVAGVSGEYFQDSNIAKPLPLVKDTELAKKVWDFSTKLTDSQSGESS 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2123066 AT4G11410 [Arabidopsis thaliana (taxid:3702)]

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 139/279 (49%), Positives = 188/279 (67%)

Query:     1 MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
             ++ G +SGIG ET RVLALR  HV++              ILKE   A++D +KLDLSS+
Sbjct:    33 IVTGASSGIGEETTRVLALRGVHVVMAVRNTDSGNQVRDKILKEIPQAKIDVMKLDLSSM 92

Query:    61 ASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
             AS++ FA  +                M CP+ +S D IE+QFATNH+GHFLLTNLLL+ M
Sbjct:    93 ASVRSFASEYQSLDLPLNLLINNAGIMACPFLLSSDNIELQFATNHLGHFLLTNLLLERM 152

Query:   121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
              +TA E+  EGRIV +SS  H++ Y+ G++F KIND A Y+  +AYGQSKL NILHA EL
Sbjct:   153 KKTASESNREGRIVIVSSEGHRFAYREGVQFDKINDEARYNTLQAYGQSKLGNILHATEL 212

Query:   181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
             +R F+E+GVNITANS+HPG IMTNL ++ + +         ++ K++PQGAATTCY ALH
Sbjct:   213 ARLFKEQGVNITANSLHPGSIMTNLLRYHSFINTIGNAVGKYVLKSIPQGAATTCYAALH 272

Query:   241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKM 279
             P  KGV+G+Y +D N   P++  +D+ LAKKLW+FS ++
Sbjct:   273 PQAKGVSGEYLMDNNISDPNSQGKDKDLAKKLWEFSLRL 311

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2134971 AT4G24050 [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 128/291 (43%), Positives = 173/291 (59%)

Query:     1 MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
             ++ G  SGIG ETARVLA R A +I             + I+ E     +  +KLDLSSI
Sbjct:    38 VITGATSGIGAETARVLAKRGARLIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSI 97

Query:    61 ASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
             AS+++F  +F                +   + ISEDGIEM FATN++GHFLLTNLLL+ M
Sbjct:    98 ASVRNFVADFESLDLPLNLLINNAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKM 157

Query:   121 NRTAKETGIEGRIVNLSSIAHQYTYKGG-IRFQKI--NDRAGYSDKKAYGQSKLANILHA 177
              +TA+ETG++GRIVN++S  H + + G  I + ++    +  +   +AY  SKLAN+LH 
Sbjct:   158 IQTAEETGVQGRIVNVTSGIHGW-FSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHT 216

Query:   178 NELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF-SFFLWKNVPQGAATTCY 236
              ELS R Q+ G N+T N VHPG++ T L +    ++  L FF +  L K VPQ AATTCY
Sbjct:   217 KELSSRLQKIGANVTVNCVHPGVVRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTCY 276

Query:   237 VALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASKTS 287
             VA +P L  V+GKYF DCNE  PS L  + + A KLW  S  ++   SKTS
Sbjct:   277 VATNPRLVNVSGKYFTDCNETTPSGLGTNSSEATKLWAASEILVTQHSKTS 327

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2019474 AT1G64590 [Arabidopsis thaliana (taxid:3702)]

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 118/292 (40%), Positives = 163/292 (55%)

Query:     1 MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
             ++ G  SGIG ETARVLA R A +++              IL E   A +  + LDLSS+
Sbjct:    38 IITGATSGIGAETARVLAKRGARLVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSL 97

Query:    61 ASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
              S++ F  +F                    + +SEDG+EM FATN++GHFLLT LLL  M
Sbjct:    98 TSVRRFVDDFESLNLPLNILINNAGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKM 157

Query:   121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND----RAGYSDKKAYGQSKLANILH 176
               TA +TG++GRIVN++S+ H + + G +  Q + D       Y   +AY  SKLAN+LH
Sbjct:   158 IETAAQTGVQGRIVNVTSVVHSW-FSGDM-LQYLADISRNNRNYDATRAYALSKLANVLH 215

Query:   177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF-SFFLWKNVPQGAATTC 235
               ELSR   +   N+TAN VHPG++ T L +    V+  L FF +  L K+VPQ AATTC
Sbjct:   216 TVELSRLLHKMDANVTANCVHPGIVKTRLTRDREGVVTDLVFFLTSKLLKSVPQAAATTC 275

Query:   236 YVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSASKTS 287
             YVA  P L+ V GKYF DCNE   S        A++LW  S+ +++  + T+
Sbjct:   276 YVATSPRLRNVCGKYFSDCNEARSSKSGSCNLKAQRLWTASDLLVSPPNSTT 327

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2170071 AT5G50130 [Arabidopsis thaliana (taxid:3702)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 114/284 (40%), Positives = 167/284 (58%)

Query:     1 MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
             ++ GG SGIG ETARVLA R   V++            + I++E+  A +   ++DLSS+
Sbjct:    40 IITGGTSGIGAETARVLAKRGVRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSL 99

Query:    61 ASIKDFAQNFXXXXXXXXXXXXXXXXMFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDT 119
             +S+  F   F                +F P  + SE+ IE+ FATN +GH+LLT +L++ 
Sbjct:   100 SSVARFCSQFLSQDLPLNILINNAG-VFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEK 158

Query:   120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI-NDRAGYSDKKAYGQSKLANILHAN 178
             M  TA+++GIEGRI+NLSS+ H +       F K+ +  + Y+  +AY QSKLA ILHA 
Sbjct:   159 MIDTAEKSGIEGRIINLSSVIHNWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAK 218

Query:   179 ELSRRFQEEGVNITANSVHPGLIMTNLFK-HSAVVMRFLKFFSFFLWKNVPQGAATTCYV 237
              LS++ ++   N+T N+VHPG++ T + + H  +    L   +  L K++ QGAATTCYV
Sbjct:   219 ALSKQLKDRNANVTINAVHPGIVKTGIIRAHKGLFTDSLFLIASKLLKSISQGAATTCYV 278

Query:   238 ALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMIN 281
             AL    KG++GKYF DCNE   S LA DE +A KL   S  +I+
Sbjct:   279 ALSNETKGLSGKYFADCNETNCSDLANDEYVALKLCTQSRALIH 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|E1BTL3 RDH12 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 114/282 (40%), Positives = 153/282 (54%)

Query:     1 MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
             ++ G  +GIG ETAR LA R A VI+            + I  E D   V   KLDL+  
Sbjct:    47 VITGANTGIGKETARELARRGARVIVACRDIAKAEAAAREIRAETDNQEVIVKKLDLADT 106

Query:    61 ASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHI--GHFLLTNLLLD 118
              SI++FA +F                M CPY  + DG EM    NH+  GHFLLT LLL+
Sbjct:   107 RSIREFANSFLAEEKELHILINNAGVMLCPYSKTADGFEMHLGVNHLAPGHFLLTFLLLE 166

Query:   119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
              + ++A       RIVN+SS+AH   + G IRF  +N    Y+   AY  SKLAN+L   
Sbjct:   167 RLKQSAPS-----RIVNVSSLAH---HGGRIRFHDLNGEKSYNRGLAYCHSKLANVLFTR 218

Query:   179 ELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA 238
             EL+RR Q  G  +TANS+HPG + + L +HS V+    + FSFFL K   +GA T+ Y A
Sbjct:   219 ELARRLQ--GTKVTANSLHPGSVHSELVRHSFVMTWLWRIFSFFL-KTPWEGAQTSVYCA 275

Query:   239 LHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMI 280
             +   L+ VTG+YF DC     S   RD+  AKKLW+ S +++
Sbjct:   276 VAEELESVTGQYFSDCQPAYVSPWGRDDETAKKLWNVSCELL 317

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

ZFIN|ZDB-GENE-040718-9 rdh12 "retinol dehydrogenase 12 (all-trans and 9-cis)" [Danio rerio (taxid:7955)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 109/280 (38%), Positives = 151/280 (53%)

Query:     1 MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
             ++ G  SGIG ETA  LA R A VI+              I      A+V+  +LDL+  
Sbjct:    47 LVTGANSGIGKETALDLASRGARVILACRDLEKAEEAAAEIRTRVGGAKVEVRELDLADC 106

Query:    61 ASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
              SI+ FAQ F                M CPY  + DG EMQ   NH+GH+LLT LL+  +
Sbjct:   107 CSIRAFAQRFLREVDHLHILINNAGVMMCPYMKTADGFEMQIGVNHLGHYLLTYLLIGLL 166

Query:   121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
              R+A       RIV +SS+AH +   G IRF  ++ +  Y+   AY QSKLAN+L   EL
Sbjct:   167 KRSAPS-----RIVVVSSLAHNF---GWIRFHDLHSQGSYNSGLAYCQSKLANVLFTREL 218

Query:   181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
             +RR Q  G N+T NSVHPG + + L +HS ++     FFS FL K+  +GA T+ Y A+ 
Sbjct:   219 ARRLQ--GSNVTVNSVHPGTVRSELVRHSTLMSLLFAFFSMFL-KSPKEGAQTSIYCAVA 275

Query:   241 PNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMI 280
               L+ ++GK+F DC     +   R E  A+KLWD S +++
Sbjct:   276 EELQSISGKHFSDCAPAFVAPQGRSEETARKLWDVSCELL 315

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-050522-387 zgc:112332 "zgc:112332" [Danio rerio (taxid:7955)]

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 107/281 (38%), Positives = 149/281 (53%)

Query:     1 MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
             ++ G  +GIG ETAR LA R A V++            + ++       +   KLDL+  
Sbjct:    24 IITGANTGIGKETARDLARRGARVVMACRDLEKAEAARRELMDNSGNQNIVVKKLDLADT 83

Query:    61 ASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
              SIK FA+                  M CPY  + DG EMQF  NH+GHFLL  LLLD +
Sbjct:    84 KSIKAFAELINKEEKQVNILINNAGIMMCPYSKTADGFEMQFGVNHLGHFLLIYLLLDLL 143

Query:   121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
              ++        RIVN++S+AH ++   GI  + IN    YS ++AYGQSKLANIL    L
Sbjct:   144 KKSTPS-----RIVNVASVAHTWS---GIHLEDINSEKVYSPRRAYGQSKLANILCTRSL 195

Query:   181 SRRFQEEGVNITANSVHPGLIMTNLFKH-SAVVMRFLKFFSFFLWKNVPQGAATTCYVAL 239
             ++R Q  GVN+   S+HPG++ + LF++ S       K FS F  K   QGA TT Y A+
Sbjct:   196 AKRLQGSGVNVY--SLHPGVVQSELFRNLSKPAQIAFKVFSPFT-KTTSQGAQTTIYCAI 252

Query:   240 HPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMI 280
              P L   +G Y+ DC     S  A D+ +A+KLW+ S +M+
Sbjct:   253 EPELDRESGGYYSDCGPAQCSREASDDEMAQKLWELSCQML 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6RVV4	TIC32_PEA	1, ., 1, ., 1, ., -	0.5857	0.9722	0.8860	N/A	no
Q8BYK4	RDH12_MOUSE	1, ., 1, ., 1, ., -	0.4214	0.9340	0.8512	yes	no
O74959	YJCD_SCHPO	1, ., -, ., -, ., -	0.3368	0.9652	0.8200	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_VI0646 hypothetical protein (322 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	288
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-103
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	1e-91
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	6e-71
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-70
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	4e-68
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	5e-49
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	1e-46
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	3e-35
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	5e-35
cd05233	234	cd05233, SDR_c, classical (c) SDRs	1e-34
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	7e-34
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	9e-31
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	5e-30
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-26
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-24
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-23
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	8e-21
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-19
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-19
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	6e-19
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	1e-17
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-17
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	5e-17
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-16
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	3e-16
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	4e-16
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	5e-16
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-16
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-15
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	7e-15
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-14
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-14
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-14
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-14
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	3e-14
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	4e-14
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	7e-14
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-13
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-13
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	2e-13
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-13
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-13
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	8e-13
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	9e-13
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-12
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	3e-12
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-12
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	5e-12
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	5e-12
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	9e-12
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	1e-11
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	1e-11
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-11
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-11
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-11
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	3e-11
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-11
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-11
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-10
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-10
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-10
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-10
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	4e-10
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-10
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-10
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	5e-10
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	5e-10
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	8e-10
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-09
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-09
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-09
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-09
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-09
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-09
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-09
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	3e-09
cd08928	248	cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reducta	3e-09
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	4e-09
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	4e-09
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	5e-09
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	6e-09
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	6e-09
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-09
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	8e-09
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	9e-09
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-08
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-08
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-08
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	1e-08
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-08
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-08
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-08
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-08
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-08
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-08
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	5e-08
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	5e-08
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	6e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-07
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	1e-07
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-07
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-07
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-07
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-07
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-07
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-07
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-07
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	3e-07
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	6e-07
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-07
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	6e-07
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	7e-07
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	8e-07
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	8e-07
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	9e-07
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	9e-07
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-06
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-06
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-06
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-06
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-06
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	3e-06
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-06
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	3e-06
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	3e-06
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	5e-06
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	5e-06
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-06
pfam08659	181	pfam08659, KR, KR domain	6e-06
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	7e-06
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	8e-06
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	8e-06
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	8e-06
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-06
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	9e-06
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-05
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-05
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-05
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-05
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-05
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-05
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	1e-05
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-05
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-05
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-05
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-05
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-05
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	3e-05
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-05
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	3e-05
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-05
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-05
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	4e-05
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	5e-05
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	6e-05
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	6e-05
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-05
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	9e-05
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-04
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-04
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	2e-04
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-04
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	3e-04
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	3e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-04
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	3e-04
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	3e-04
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-04
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	4e-04
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	4e-04
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	4e-04
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	4e-04
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	5e-04
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	5e-04
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	6e-04
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	8e-04
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.001
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	0.001
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	0.001
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	0.002
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	0.002
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	0.002
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	0.002
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	0.002
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	0.002
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	0.002
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	0.003
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	0.004
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	0.004
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	0.004
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	0.004
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  301 bits (773), Expect = e-103
 Identities = 133/270 (49%), Positives = 169/270 (62%), Gaps = 8/270 (2%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIG ETAR LA R AHVIIA RN     EA   I KE   A+V+ ++LDLSS+AS+
Sbjct: 8   GANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLSSLASV 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           + FA+ F+A    L+ILINNAGIM  P ++++DG E+QFA N++GHFLLTNLLL  +  +
Sbjct: 68  RQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLLTNLLLPVLKAS 127

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
           A       RIVN+SSIAH+            N++  YS  KAYGQSKLANIL   EL+RR
Sbjct: 128 A-----PSRIVNVSSIAHRAGPIDFNDLDLENNK-EYSPYKAYGQSKLANILFTRELARR 181

Query: 184 FQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPNL 243
              EG  +T N++HPG++ T L + +       K    FL K+  QGA T  Y A  P L
Sbjct: 182 L--EGTGVTVNALHPGVVRTELLRRNGSFFLLYKLLRPFLKKSPEQGAQTALYAATSPEL 239

Query: 244 KGVTGKYFLDCNEMPPSALARDETLAKKLW 273
           +GV+GKYF DC     S+ A DE LA+KLW
Sbjct: 240 EGVSGKYFSDCKIKMSSSEALDEELAEKLW 269

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  272 bits (697), Expect = 1e-91
 Identities = 126/280 (45%), Positives = 170/280 (60%), Gaps = 14/280 (5%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  +GIG ETAR LA R A VI+A R+MA   EA   I ++     V    LDL+S+
Sbjct: 5   IITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLASL 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            SI+ FA  F+A    L++LINNAG+M CPY  +EDG EMQF  NH+GHFLLTNLLLD +
Sbjct: 65  KSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLLTNLLLDLL 124

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            ++A       RIVN+SS+AH+    G I F  +N    Y+   AY QSKLAN+L   EL
Sbjct: 125 KKSAP-----SRIVNVSSLAHKA---GKINFDDLNSEKSYNTGFAYCQSKLANVLFTREL 176

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF----LKFFSFFLWKNVPQGAATTCY 236
           +RR Q  G  +T N++HPG++ T L +H+ +   F    L    +   K   +GA T+ Y
Sbjct: 177 ARRLQ--GTGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWPFVKTPREGAQTSIY 234

Query: 237 VALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFS 276
           +AL   L+GV+GKYF DC    P+  A DE  A++LW+ S
Sbjct: 235 LALAEELEGVSGKYFSDCKLKEPAPEAMDEETARRLWEIS 274

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  221 bits (564), Expect = 6e-71
 Identities = 113/296 (38%), Positives = 142/296 (47%), Gaps = 45/296 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG SG+GLET R LA   AHVI+ AR    A EA    L   D   V  L  DL+ + S+
Sbjct: 33  GGYSGLGLETTRALAQAGAHVIVPARRPDVAREA----LAGIDGVEVVML--DLADLESV 86

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           + FA+ F+     ++ILINNAG+M CP     DG E QFATNH+GHF L NLL   +   
Sbjct: 87  RAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAA- 145

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
               G   R+V LSS  H+ +    IR+   +   GY    AYGQSK AN L A  L + 
Sbjct: 146 ----GAGARVVALSSAGHRRS---PIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKL 198

Query: 184 FQEEGVNITANSVHPGLIMTNLFKHSAVV-MRFLKFFSFFLW------------KNVPQG 230
            +++GV   A SVHPG I+T L +H        L       W            K   QG
Sbjct: 199 GKDQGVR--AFSVHPGGILTPLQRHLPREEQVALG------WVDEHGNPIDPGFKTPAQG 250

Query: 231 AATTCYVALHPNLKGVTGKYFLDCNEMPPSA----------LARDETLAKKLWDFS 276
           AAT  + A  P L G+ G Y  DC+   P+            A D   A +LW  S
Sbjct: 251 AATQVWAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALS 306

Length = 315

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  219 bits (558), Expect = 2e-70
 Identities = 116/293 (39%), Positives = 165/293 (56%), Gaps = 28/293 (9%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  SGIG ETAR  AL  AHVI+A RNM+ A+ A   IL+E   ARV+ + LDL+S+
Sbjct: 5   IITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLASL 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            S++ FA+ F A N PL++L+ NA +   P+ ++EDG+E  F  NH+GHF L  LL D +
Sbjct: 65  RSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQLLEDVL 124

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG-------------YSDKKAYG 167
            R+A       R++ +SS +H        RF  + D  G             Y    AY 
Sbjct: 125 RRSAP-----ARVIVVSSESH--------RFTDLPDSCGNLDFSLLSPPKKKYWSMLAYN 171

Query: 168 QSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNV 227
           ++KL NIL +NEL RR    G  IT+NS+HPG +M +    +  V   L   +    K++
Sbjct: 172 RAKLCNILFSNELHRRLSPRG--ITSNSLHPGNMMYSSIHRNWWVYTLLFTLARPFTKSM 229

Query: 228 PQGAATTCYVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMI 280
            QGAATT Y A  P L+G+ G YF +C    PS  A+ E  A++LW+ S ++I
Sbjct: 230 QQGAATTVYCATAPELEGLGGMYFNNCFRCLPSPEAQSEATAQQLWELSERLI 282

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  213 bits (545), Expect = 4e-68
 Identities = 100/287 (34%), Positives = 145/287 (50%), Gaps = 21/287 (7%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  +G+G ETA  LA + AHV++A RN+     A   I      A V   +LDL+S+AS+
Sbjct: 23  GANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASV 82

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           +  A    A    +++LINNAG+M+ P Q + DG E+QF TNH+GHF LT LLLD +   
Sbjct: 83  RAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRL--- 139

Query: 124 AKETGIEG-RIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSR 182
                + G R+V +SS  H+   +  I F  +     Y+   AYGQSKLAN+L   EL R
Sbjct: 140 ---LPVPGSRVVTVSSGGHR--IRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQR 194

Query: 183 RFQEEGVNITANSVHPGLIMTNLFKHS-AVVMRFLKFFSFFLWKNVPQGAATTCYVALHP 241
           R    G    A + HPG+  T L ++    +       +  L ++   GA  T   A  P
Sbjct: 195 RLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGALPTLRAATDP 254

Query: 242 NLKGVTGKYF--LDCNEM-------PPSALARDETLAKKLWDFSNKM 279
            ++G  G+Y+      E          SA + DE L ++LW  S ++
Sbjct: 255 AVRG--GQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEEL 299

Length = 306

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  164 bits (417), Expect = 5e-49
 Identities = 99/296 (33%), Positives = 141/296 (47%), Gaps = 31/296 (10%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + G+GL  AR LA   A VI+  RN A    A   I      A++    LDLSS+AS+
Sbjct: 21  GASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASV 80

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
               +   A   P+++LINNAG+M  P  Q + DG E+QF TNH+GHF LT  LL  + R
Sbjct: 81  AALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLL-R 139

Query: 123 TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSR 182
             +      R+ + SSIA +   +G I +  +N    Y+  +AY QSK+A  L A EL R
Sbjct: 140 AGR-----ARVTSQSSIAAR---RGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDR 191

Query: 183 RFQEEGVNITANSVHPGLIMTNLF--------KHSAVVMRFLKFFSF--FLWKNVPQGAA 232
           R +  G  IT+N  HPG+  TNL             +++R ++  S   FL   V     
Sbjct: 192 RSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAIL 251

Query: 233 TTCYVALHPNLKGVTGKYFLDCNEM----PPSALA-----RDETLAKKLWDFSNKM 279
              Y A  P+ +G  G ++           P   A     R    A +LW+ S ++
Sbjct: 252 PALYAATSPDAEG--GAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQL 305

Length = 313

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  158 bits (401), Expect = 1e-46
 Identities = 98/309 (31%), Positives = 140/309 (45%), Gaps = 39/309 (12%)

Query: 4   GGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G +SG+GL  A+ LA R   HV++A R+   A +A Q +    D      L  DL+S+ S
Sbjct: 8   GASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKD--SYSVLHCDLASLDS 65

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQI---SEDGIEMQFATNHIGHFLLTNLLLDT 119
           ++ F  NF     PL+ L+ NA +     +    + DG E+    NH+GHFLLTNLLL+ 
Sbjct: 66  VRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTNLLLED 125

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGI------------------RFQKINDRAGYS 161
           +    +      RIV + SI H      G                    F  + D   + 
Sbjct: 126 L---QRSENASPRIVIVGSITHNPNTLAGNVPPRATLGDLEGLAGGLKGFNSMIDGGEFE 182

Query: 162 DKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM-TNLFKHSAVVMR--FLKF 218
             KAY  SK+ N+L   EL RR  EE   IT NS++PG I  T LF+    + R  F  F
Sbjct: 183 GAKAYKDSKVCNMLTTYELHRRLHEE-TGITFNSLYPGCIAETGLFREHYPLFRTLFPPF 241

Query: 219 FSFFLWKNVPQGAATTC--YVALHPNLKGVTGKYFLDCN-----EMPPSALARDETLAKK 271
             +     V +  A      V   P+L GV+G Y+         E   S  + D+  A+K
Sbjct: 242 QKYITKGYVSEEEAGERLAAVIADPSL-GVSGVYWSWGKASGSFENQSSQESSDDEKARK 300

Query: 272 LWDFSNKMI 280
           LW+ S K++
Sbjct: 301 LWEISEKLV 309

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score =  128 bits (323), Expect = 3e-35
 Identities = 100/321 (31%), Positives = 148/321 (46%), Gaps = 59/321 (18%)

Query: 4   GGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G +SG+GL TA+ LA   K HV++A R+   A  A +      D+  V  + LDL+S+ S
Sbjct: 4   GASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTV--MHLDLASLDS 61

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQ-------ISEDGIEMQFATNHIGHFLLTNL 115
           ++ F  NF     PL++L+ NA +    Y         + DG E+   TNH+GHFLL+ L
Sbjct: 62  VRQFVDNFRRSGRPLDVLVCNAAV----YLPTAKEPTFTADGFELSVGTNHLGHFLLSRL 117

Query: 116 LLDTMNRT---AKETGIEGRIV-NLSSIAHQYTYK----------GGIRFQKIN---DRA 158
           LLD + ++   +K   I G I  N +++A     K          GG+     +   D  
Sbjct: 118 LLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGG 177

Query: 159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM-TNLFKHSAVVMRFLK 217
            +   KAY  SK+ N+L   E  RR+ EE   IT  S++PG I  T LF+    + R L 
Sbjct: 178 EFDGAKAYKDSKVCNMLTMQEFHRRYHEE-TGITFASLYPGCIATTGLFREHIPLFRLL- 235

Query: 218 FFSFFLWKNVPQGAATTCYVALH------------PNLKGVTGKYFL-----DCNEMPPS 260
            F  F  K + +G     YV+              P+L   +G Y+         E   S
Sbjct: 236 -FPPFQ-KYITKG-----YVSEEEAGKRLAQVVSDPSL-TKSGVYWSWNGGSASFENQLS 287

Query: 261 ALARDETLAKKLWDFSNKMIN 281
             A D   AKK+W+ S K++ 
Sbjct: 288 QEASDAEKAKKVWEISEKLVG 308

Length = 308

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score =  128 bits (323), Expect = 5e-35
 Identities = 101/326 (30%), Positives = 151/326 (46%), Gaps = 68/326 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G +SG+GL  A+ LA R  HVI+A RN+  A   A++L +  D       + +DL  + S
Sbjct: 13  GASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPD---SYTIIHIDLGDLDS 69

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPY----QISEDGIEMQFATNHIGHFLLTNLLLD 118
           ++ F  +F AL  PL+ L+ NA + + P       S  G E+  ATNH+GHFLL NLLL+
Sbjct: 70  VRRFVDDFRALGKPLDALVCNAAV-YMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLE 128

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI--------NDRAGY---------- 160
            + ++      + R+V L ++       GG    KI         D +G+          
Sbjct: 129 DLKKSPAP---DPRLVILGTVTANPKELGG----KIPIPAPADLGDLSGFEAGFKAPISM 181

Query: 161 -SDK-----KAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM-TNLFKHSAVVM 213
              K     KAY  SKL N+L   EL RR+ E    IT +S++PG +  T LF+++  + 
Sbjct: 182 ADGKKFKPGKAYKDSKLCNMLTMRELHRRYHES-TGITFSSLYPGCVADTPLFRNTPPLF 240

Query: 214 RFLKFFSFFLWKNVPQGAAT-------TCYVALHPNLK--GV----------TGKYFLDC 254
           + L  F +F  KN+  G  +          V   P     GV            K F   
Sbjct: 241 QKL--FPWF-QKNITGGYVSQELAGERVAQVVADPEFAQSGVHWSWGNRQKKDRKAFS-- 295

Query: 255 NEMPPSALARDETLAKKLWDFSNKMI 280
            E+  S  A D+  A++LWD S K++
Sbjct: 296 QEL--SDRATDDDKARRLWDLSAKLV 319

Length = 322

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  125 bits (315), Expect = 1e-34
 Identities = 57/208 (27%), Positives = 83/208 (39%), Gaps = 27/208 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG   AR LA   A V++A RN  A  E   +            ++ D+S    +
Sbjct: 5   GASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALG---GNAVAVQADVSDEEDV 61

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +   +  +     L+IL+NNAGI       +++++  +     N  G FLLT   L  M 
Sbjct: 62  EALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPHMK 121

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           +        GRIVN+SS+A      G                 AY  SK A       L+
Sbjct: 122 K-----QGGGRIVNISSVAGLRPLPGQA---------------AYAASKAALEGLTRSLA 161

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHS 209
                 G  I  N+V PGL+ T +    
Sbjct: 162 LELAPYG--IRVNAVAPGLVDTPMLAKL 187

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score =  124 bits (314), Expect = 7e-34
 Identities = 95/315 (30%), Positives = 145/315 (46%), Gaps = 45/315 (14%)

Query: 1   MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS 59
           ++ G +SG+GL  A+ LA   + HVI+A R+   A +A + +    D+  +  + LDL S
Sbjct: 7   IITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTI--MHLDLGS 64

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIMFCPYQ---ISEDGIEMQFATNHIGHFLLTNLL 116
           + S++ F Q F     PL+ L+ NA + F   +    + DG E+   TNH+GHFLL NLL
Sbjct: 65  LDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLL 124

Query: 117 LDTMNRTAKETGIEGRIVNLSSI-AHQYTYKGGIR--------------FQKIN---DRA 158
           LD +         + R++ + SI  +  T  G +               F+      D  
Sbjct: 125 LDDLK---NSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGK 181

Query: 159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM-TNLFKHSAVVMRFLK 217
            +   KAY  SK+ N+L   EL RRF +E   IT  S++PG I  T LF+    + R   
Sbjct: 182 EFKGAKAYKDSKVCNMLTVRELHRRFHDE-TGITFASLYPGCIADTGLFREHVPLFR--T 238

Query: 218 FFSFFLWKNVPQGAAT-------TCYVALHPNLKGVTGKYFLDCN-----EMPPSALARD 265
            F  F  K + +G  +          V   P LK  +G Y+   N         S    D
Sbjct: 239 LFPPF-QKYITKGYVSEEEAGERLAQVVSDPKLKK-SGVYWSWGNRQESFVNQLSEEVSD 296

Query: 266 ETLAKKLWDFSNKMI 280
           ++ A K+WD S K++
Sbjct: 297 DSKASKMWDLSEKLV 311

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  115 bits (289), Expect = 9e-31
 Identities = 61/210 (29%), Positives = 85/210 (40%), Gaps = 30/210 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAAN-EARQLILKEDDTARVDTLKLDLSSI-A 61
           G +SGIG   AR LA   A V++AAR       EA    +KE    R   +  D+S    
Sbjct: 12  GASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEE 71

Query: 62  SIKDFAQNFIALNLPLNILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLD 118
           S++            ++IL+NNAGI        +++E+  +     N +G FLLT   L 
Sbjct: 72  SVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALP 131

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            M         + RIVN+SS+A                  G   + AY  SK A I    
Sbjct: 132 LM--------KKQRIVNISSVAG---------------LGGPPGQAAYAASKAALIGLTK 168

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
            L+      G  I  N+V PG I T +   
Sbjct: 169 ALALELAPRG--IRVNAVAPGYIDTPMTAA 196

Length = 251

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  112 bits (283), Expect = 5e-30
 Identities = 70/252 (27%), Positives = 99/252 (39%), Gaps = 45/252 (17%)

Query: 4   GGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G   GIG E  R LA      VI+ AR++     A + +  E  + R    +LD++  AS
Sbjct: 7   GANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRF--HQLDVTDDAS 64

Query: 63  IKDFAQNFIALNLPLNILINNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
           I+  A         L+IL+NNAGI F        + +       TN  G   +T  LL  
Sbjct: 65  IEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQALLPL 124

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           + ++       GRIVN+SS         G                AYG SK A       
Sbjct: 125 LKKSP-----AGRIVNVSSGL-------GSL------------TSAYGVSKAALNALTRI 160

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL 239
           L++  +E    I  N+  PG + T++    A              K   +GA T  Y+AL
Sbjct: 161 LAKELKET--GIKVNACCPGWVKTDMGGGKA-------------PKTPEEGAETPVYLAL 205

Query: 240 HPNLKGVTGKYF 251
            P     TGK+F
Sbjct: 206 LPPDGEPTGKFF 217

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  103 bits (260), Expect = 2e-26
 Identities = 63/204 (30%), Positives = 84/204 (41%), Gaps = 29/204 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG   A  LA   A VI+       A    +L+  E    +    ++D+   A++
Sbjct: 13  GAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELV--EAAGGKARARQVDVRDRAAL 70

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP----YQISEDGIEMQFATNHIGHFLLTNLLLDT 119
           K      +     L+IL+ NAGI   P     ++ ++  E     N  G FLLT   L  
Sbjct: 71  KAAVAAGVEDFGRLDILVANAGI--FPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPA 128

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           + R        GRIV  SS+A       G R       A Y+  KA G       L A E
Sbjct: 129 LIRAGG-----GRIVLTSSVA-------GPRVGYPG-LAHYAASKA-GLVGFTRAL-ALE 173

Query: 180 LSRRFQEEGVNITANSVHPGLIMT 203
           L+ R      NIT NSVHPG + T
Sbjct: 174 LAAR------NITVNSVHPGGVDT 191

Length = 251

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 98.8 bits (246), Expect = 2e-24
 Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 31/262 (11%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  SGIG   A  +A R   V +  RN   A EAR+ I  E     +    +D+S  
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
             + +F + F      L++LINNAG M    +++EDG+E  FATN +G ++LT  L+  +
Sbjct: 65  KQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLGTYILTTHLIPVL 124

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN------DRAGYSDKKAYGQSKLANI 174
            +       + R++ +SS        GG+  QK+N      +R  +     Y Q+K   +
Sbjct: 125 EKEE-----DPRVITVSS--------GGMLVQKLNTNNLQSERTAFDGTMVYAQNKRQQV 171

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFF--LWKNVPQGAA 232
           +    ++ ++ ++   I  + +HPG   T      AV      F + F    ++  QGA 
Sbjct: 172 I----MTEQWAKKHPEIHFSVMHPGWADT-----PAVRNSMPDFHARFKDRLRSEEQGAD 222

Query: 233 TTCYVALHPN-LKGVTGKYFLD 253
           T  ++AL     K  +G+++ D
Sbjct: 223 TVVWLALSSAAAKAPSGRFYQD 244

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 95.6 bits (239), Expect = 2e-23
 Identities = 61/204 (29%), Positives = 85/204 (41%), Gaps = 28/204 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   A  LA   A V+I   N  AA      +      ARV  L  D+S  A++
Sbjct: 12  GASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARV--LVFDVSDEAAV 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +   +  +     L+IL+NNAGI        ++SE+  +     N  G F +    L  M
Sbjct: 70  RALIEAAVEAFGALDILVNNAGI-TRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPM 128

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                +    GRIVN+SS++      G         +  YS  KA G       L A EL
Sbjct: 129 ----IKAR-YGRIVNISSVSGVTGNPG---------QTNYSAAKA-GVIGFTKAL-ALEL 172

Query: 181 SRRFQEEGVNITANSVHPGLIMTN 204
           + R       IT N+V PG I T+
Sbjct: 173 ASR------GITVNAVAPGFIDTD 190

Length = 246

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 88.1 bits (219), Expect = 8e-21
 Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 32/209 (15%)

Query: 4   GGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS--I 60
           G + GIGLE  R L  R    VI   R+ +AA E   L       +R+  L+LD++    
Sbjct: 5   GASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASH---SRLHILELDVTDEIA 61

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI--MFCPY-QISEDGIEMQFATNHIGHFLLTNLLL 117
            S +  A+     +  L++LINNAGI   + P  ++  + +   F  N +G  LLT   L
Sbjct: 62  ESAEAVAERL--GDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFL 119

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLA-NILH 176
             + +     G   +I+N+SS        G I     N   G+    +Y  SK A N+L 
Sbjct: 120 PLLLK-----GARAKIINISSRV------GSIGD---NTSGGWY---SYRASKAALNMLT 162

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNL 205
            + L+   + +G  IT  S+HPG + T++
Sbjct: 163 KS-LAVELKRDG--ITVVSLHPGWVRTDM 188

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 85.8 bits (213), Expect = 1e-19
 Identities = 62/220 (28%), Positives = 90/220 (40%), Gaps = 31/220 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANE-ARQLILKEDDTA-RVDTLKLDLSSIA 61
           G +SGIG E A+ LA R  ++I+ AR        A++L   ED T   V+ +  DLS   
Sbjct: 13  GASSGIGAELAKQLARRGYNLILVARREDKLEALAKEL---EDKTGVEVEVIPADLSDPE 69

Query: 62  SIKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDT 119
           +++           P+++L+NNAG   F P+ ++S D  E     N +    LT  +L  
Sbjct: 70  ALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPG 129

Query: 120 MNRTAKETGIEGRIVNLSSIA-HQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
           M          G I+N+ S A    T    +          YS  KA+  S  +  L   
Sbjct: 130 MVERGA-----GHIINIGSAAGLIPTPYMAV----------YSATKAFVLS-FSEALRE- 172

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF 218
           EL       GV +TA  V PG   T  F      +  L  
Sbjct: 173 ELKGT----GVKVTA--VCPGPTRTEFFDAKGSDVYLLSP 206

Length = 265

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 84.2 bits (209), Expect = 3e-19
 Identities = 61/226 (26%), Positives = 88/226 (38%), Gaps = 37/226 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIGL  A  LA +   VI  ARN           L E     ++ L+LD++   SI
Sbjct: 7   GCSSGIGLALALALAAQGYRVIATARNPDKLES-----LGELLNDNLEVLELDVTDEESI 61

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           K   +  I     +++L+NNAG   F P  + S + +   F  N  G   +T   L  M 
Sbjct: 62  KAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPLM- 120

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA----YGQSKLANILHA 177
           R        GRIVN+SS+A       G+          Y   KA      +S L   L  
Sbjct: 121 RKQGS----GRIVNVSSVA-------GLVPTPFL--GPYCASKAALEALSES-LRLEL-- 164

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFL 223
                 F   G+ +T   + PG + T    ++A         S + 
Sbjct: 165 ----APF---GIKVT--IIEPGPVRTGFADNAAGSALEDPEISPYA 201

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 83.4 bits (207), Expect = 6e-19
 Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 34/208 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   A  LA   A V +  R+  AA E  + I      A    L+ D+S   ++
Sbjct: 7   GASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAA--LEADVSDREAV 64

Query: 64  KDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
           +   +   A   P++IL+NNAGI    +    ++SE+  +     N  G F +T  ++  
Sbjct: 65  EALVEKVEAEFGPVDILVNNAGITRDNLL--MRMSEEDWDAVINVNLTGVFNVTQAVIRA 122

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHA 177
           M +        GRI+N+SS+        G   Q     A Y+  KA   G +K      A
Sbjct: 123 MIKRRS-----GRIINISSVVGLI----GNPGQ-----ANYAASKAGVIGFTKSL----A 164

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNL 205
            EL+ R       IT N+V PG I T++
Sbjct: 165 KELASR------GITVNAVAPGFIDTDM 186

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 80.0 bits (198), Expect = 1e-17
 Identities = 58/212 (27%), Positives = 87/212 (41%), Gaps = 32/212 (15%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G +SGIG  TAR LA   A V++AAR           +  E        L LD++  
Sbjct: 10  LITGASSGIGEATARALAEAGAKVVLAARREERLEA----LADEIGAGAALALALDVTDR 65

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCP----YQISEDGIEMQFATNHIGHFLLTNLL 116
           A+++   +        ++IL+NNAG+         +   D  +    TN  G    T  +
Sbjct: 66  AAVEAAIEALPEEFGRIDILVNNAGLA--LGDPLDEADLDDWDRMIDTNVKGLLNGTRAV 123

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           L  M    +++G    I+NL SIA +Y Y GG                 YG +K A  + 
Sbjct: 124 LPGM--VERKSGH---IINLGSIAGRYPYPGG---------------AVYGATKAA--VR 161

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           A  L  R +  G  I    + PGL+ T  F  
Sbjct: 162 AFSLGLRQELAGTGIRVTVISPGLVETTEFST 193

Length = 246

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 79.6 bits (197), Expect = 1e-17
 Identities = 57/208 (27%), Positives = 81/208 (38%), Gaps = 25/208 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG SGIG   A   A R A V+I   N   A E    + K     +V   K D+S    +
Sbjct: 6   GGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKA--GGKVHYYKCDVSKREEV 63

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
            + A+        + ILINNAG++      ++ ++ IE  F  N + HF  T   L  M 
Sbjct: 64  YEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFLPDML 123

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                    G IV ++S+A   +             AG +D   Y  SK A +     L 
Sbjct: 124 ERNH-----GHIVTIASVAGLISP------------AGLAD---YCASKAAAVGFHESLR 163

Query: 182 RRFQEEGV-NITANSVHPGLIMTNLFKH 208
              +  G   I    V P  I T +F+ 
Sbjct: 164 LELKAYGKPGIKTTLVCPYFINTGMFQG 191

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 78.0 bits (193), Expect = 5e-17
 Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 45/213 (21%)

Query: 4   GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIG   A  LA   A VII    +   A E  + +  +    +   +  D+S    
Sbjct: 5   GASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL--KAYGVKALGVVCDVSDRED 62

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIGHFLLT 113
           +K   +       P++IL+NNAG       I+ D + M      +     TN  G F LT
Sbjct: 63  VKAVVEEIEEELGPIDILVNNAG-------ITRDNLLMRMKEEDWDAVIDTNLTGVFNLT 115

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKL 171
             +L  M +        GRI+N+SS+       G         +A Y+  KA   G +K 
Sbjct: 116 QAVLRIMIKQRS-----GRIINISSVVGLMGNAG---------QANYAASKAGVIGFTKS 161

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMTN 204
                A EL+ R      NIT N+V PG I T+
Sbjct: 162 L----AKELASR------NITVNAVAPGFIDTD 184

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 76.5 bits (189), Expect = 2e-16
 Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 29/209 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG E A  LA   A ++++AR      E +   L+         + LD+S +   
Sbjct: 10  GASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAP-SPHVVPLDMSDLEDA 68

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPYQISEDGIEMQ---FATNHIGHFLLTNLLLDT 119
           +   +  + L   L+ILINNAGI M   +   +  I++       N+ G   LT   L  
Sbjct: 69  EQVVEEALKLFGGLDILINNAGISMRSLFH--DTSIDVDRKIMEVNYFGPVALTKAALPH 126

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           +   ++     G IV +SSIA     K G+ F     R  Y+       SK A     + 
Sbjct: 127 LIERSQ-----GSIVVVSSIAG----KIGVPF-----RTAYA------ASKHALQGFFDS 166

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           L     E  +++T   V PGLI TN+  +
Sbjct: 167 LRAELSEPNISVT--VVCPGLIDTNIAMN 193

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 75.8 bits (187), Expect = 3e-16
 Identities = 61/212 (28%), Positives = 89/212 (41%), Gaps = 38/212 (17%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G +SGIG  TAR  A   A +I+  R  A   +     L      +V  L+LD+S  
Sbjct: 4   LITGASSGIGEATARRFAKAGAKLILTGRR-AERLQELADELGAKFPVKVLPLQLDVSDR 62

Query: 61  ASIKDFAQNFIALNLP-----LNILINNAGI---MFCPYQISEDGIEMQFATNHIGHFLL 112
            SI+      +  NLP     ++IL+NNAG+   +    +   +  E    TN  G   +
Sbjct: 63  ESIE----AALE-NLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNV 117

Query: 113 TNLLLDTM-NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKL 171
           T L+L  M  R        G I+NL SIA +Y Y GG                 Y  +K 
Sbjct: 118 TRLILPIMIARNQ------GHIINLGSIAGRYPYAGG---------------NVYCATKA 156

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           A  +    L+ R    G  I   ++ PGL+ T
Sbjct: 157 A--VRQFSLNLRKDLIGTGIRVTNIEPGLVET 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 76.2 bits (188), Expect = 4e-16
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SG GL T   LA +   VI   RN            + +    +   +LD++   SI
Sbjct: 10  GASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSI 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
            +F Q  +     +++L+NNAG     +  +I  +    QF TN  G   +T  +L  M 
Sbjct: 70  HNF-QLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMR 128

Query: 122 RTAKETGIEGRIVNLSSIAHQ 142
           +        G+I+N+SSI+ +
Sbjct: 129 KQKS-----GKIINISSISGR 144

Length = 280

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 74.7 bits (184), Expect = 5e-16
 Identities = 50/208 (24%), Positives = 80/208 (38%), Gaps = 30/208 (14%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G + GIG+E AR LA     V +  RN                   V+ +  D    
Sbjct: 4   LVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSA------SGGDVEAVPYDARDP 57

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIM--FCPYQISEDGIEMQFATNHIGHFLLTNLLLD 118
              +            +++L++NAGI       + S+  +E  F+ N I    LT  LL 
Sbjct: 58  EDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALLP 117

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            +          GR+V L+S++ +    G          AGYS       SK A    A+
Sbjct: 118 ALREAGS-----GRVVFLNSLSGKRVLAG---------NAGYS------ASKFALRALAH 157

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLF 206
            L +   + GV ++A  V PG + T + 
Sbjct: 158 ALRQEGWDHGVRVSA--VCPGFVDTPMA 183

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.9 bits (185), Expect = 7e-16
 Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 31/205 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G A G+G   A  LA   A V++  R +  AA E  + +  E    R   ++ D++  A+
Sbjct: 13  GAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAV--EALGRRAQAVQADVTDKAA 70

Query: 63  IKDFAQNFIALNLPLNILINNAGIM----FCPYQISEDGIEMQFATNHIGHFLLTNLLLD 118
           ++      +     ++IL+NNAGI           S+D  +     N  G F L   ++ 
Sbjct: 71  LEAAVAAAVERFGRIDILVNNAGIFEDKPLADM--SDDEWDEVIDVNLSGVFHLLRAVVP 128

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            M +        GRIVN+SS+A    + G         R+ Y+  KA G   L   L A 
Sbjct: 129 PMRKQRG-----GRIVNISSVAGLPGWPG---------RSNYAAAKA-GLVGLTKAL-AR 172

Query: 179 ELSRRFQEEGVNITANSVHPGLIMT 203
           EL+         IT N V PG I T
Sbjct: 173 ELAEY------GITVNMVAPGDIDT 191

Length = 249

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 73.1 bits (180), Expect = 3e-15
 Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 35/210 (16%)

Query: 3   AGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
            G + GIG   A+ LA   A V++  A + AAA E    I  E    +   ++ D+S  +
Sbjct: 9   TGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEI--EAAGGKAIAVQADVSDPS 66

Query: 62  SIK---DFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLL 116
            +    D A+        ++IL+NNAG+M   P  + SE+  +  F  N  G F      
Sbjct: 67  QVARLFDAAEKAFG---GVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFF----- 118

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              +   AK     GRI+N+SS      Y              Y+  KA        +L 
Sbjct: 119 --VLQEAAKRLRDGGRIINISSSLTA-AYTPNY--------GAYAGSKA-AVEAFTRVL- 165

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLF 206
           A EL  R       IT N+V PG + T++F
Sbjct: 166 AKELGGR------GITVNAVAPGPVDTDMF 189

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 72.1 bits (177), Expect = 7e-15
 Identities = 73/273 (26%), Positives = 120/273 (43%), Gaps = 40/273 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + G+GL  AR L  +   V++ AR+   A +A+         A V  L  DLSS+A  
Sbjct: 14  GSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAAC---PGAAGV--LIGDLSSLAET 68

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
           +  A    A+    + +I+NAGI+  P  +  + GI    A N +  ++LT L+     R
Sbjct: 69  RKLADQVNAIG-RFDAVIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTALI-----R 122

Query: 123 TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN-DRAGYSDKKAYGQSKLANILHANELS 181
             K      R++ LSS  H+    G      I+    G +D  AY  SKL  +  A  ++
Sbjct: 123 RPK------RLIYLSSGMHR---GGNASLDDIDWFNRGENDSPAYSDSKLHVLTLAAAVA 173

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHP 241
           RR++    ++++N+VHPG + T +    A               ++ QG  T  ++A   
Sbjct: 174 RRWK----DVSSNAVHPGWVPTKMGGAGAP-------------DDLEQGHLTQVWLAESD 216

Query: 242 NLKG-VTGKYFLDCNEMPPSALARDETLAKKLW 273
           + +   +G YF       P   + D  L +KL 
Sbjct: 217 DPQALTSGGYFYHRRLQEPHPASEDSRLQEKLV 249

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.4 bits (176), Expect = 1e-14
 Identities = 61/208 (29%), Positives = 86/208 (41%), Gaps = 35/208 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIG   A +LA   A V+IA   N  AA E  + I +E   A    +K D+SS   
Sbjct: 12  GASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIA--VKADVSSEED 69

Query: 63  IKDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +++  +  +     ++IL+NNAGI  F     ++++  +     N  G  LLT   L  M
Sbjct: 70  VENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYM 129

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH---- 176
                +    G IVN+SSI        G          G S +  Y  SK A        
Sbjct: 130 ----IKRK-SGVIVNISSI-------WG--LI------GASCEVLYSASKGAVNAFTKAL 169

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTN 204
           A EL+         I  N+V PG I T 
Sbjct: 170 AKELAPS------GIRVNAVAPGAIDTE 191

Length = 247

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.0 bits (175), Expect = 2e-14
 Identities = 60/212 (28%), Positives = 81/212 (38%), Gaps = 36/212 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG   AR  A   A V++  RN  AA      IL       V     D+S  A +
Sbjct: 12  GASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAA---DVSDEADV 68

Query: 64  KDFAQNFIALNLPLNILINNAGI--MFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +      +     ++IL+NNAG      P   + E   +  FA N    +L T   +  M
Sbjct: 69  EAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAM 128

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH---- 176
                E G  G IVN++S A       G+R      R G      Y  SK A I      
Sbjct: 129 ---RGEGG--GAIVNVASTA-------GLRP-----RPGLG---WYNASKGAVITLTKAL 168

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           A EL          I  N+V P ++ T L + 
Sbjct: 169 AAELGPD------KIRVNAVAPVVVETGLLEA 194

Length = 251

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 72.6 bits (179), Expect = 2e-14
 Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 34/204 (16%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G A GIG  TA+ LA   A V++A  +  AA  A   +   D   R   +  D++  
Sbjct: 426 LVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD---RALGVACDVTDE 482

Query: 61  ASIKD-FAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM---QFATNHIGHFLLTNLL 116
           A+++  F +  +A    ++I+++NAGI      I E   E     F  N  GHF    L+
Sbjct: 483 AAVQAAFEEAALAFG-GVDIVVSNAGI-AISGPIEETSDEDWRRSFDVNATGHF----LV 536

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
                R  K  G+ G IV ++S       K       +N    +    AYG +K A    
Sbjct: 537 AREAVRIMKAQGLGGSIVFIAS-------K-----NAVNPGPNFG---AYGAAKAA---- 577

Query: 177 ANELSRRFQEEG--VNITANSVHP 198
              L R+   E     I  N V+P
Sbjct: 578 ELHLVRQLALELGPDGIRVNGVNP 601

Length = 681

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 57/205 (27%), Positives = 79/205 (38%), Gaps = 31/205 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG SGIGLETAR      A V I  R+ A+   AR  +           ++ D   +A+ 
Sbjct: 13  GGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQ 67

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           K  AQ        L+ +  NAG+  F P     E   +  F TN  G + L   LL  + 
Sbjct: 68  KALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLA 127

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
             A        ++N S                IN   G  +   Y  SK A +  A  LS
Sbjct: 128 NPA------SIVLNGS----------------INAHIGMPNSSVYAASKAALLSLAKTLS 165

Query: 182 RRFQEEGVNITANSVHPGLIMTNLF 206
                 G+ +  N+V PG + T L+
Sbjct: 166 GELLPRGIRV--NAVSPGPVQTPLY 188

Length = 249

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 70.1 bits (172), Expect = 3e-14
 Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 17/143 (11%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIGL  A+        VII  RN     EA+    +      + T   D++  
Sbjct: 9   LITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE------IHTEVCDVADR 62

Query: 61  ASIKDFAQNFIALNLP-LNILINNAGIM----FCPYQISEDGIEMQFATNHIGHFLLTNL 115
            S ++    ++    P LN+LINNAGI         +   D  E + ATN +    LT L
Sbjct: 63  DSRRELV-EWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTAL 121

Query: 116 LLDTMNRTAKETGIEGRIVNLSS 138
           LL  + R  + T     I+N+SS
Sbjct: 122 LLPHLLRQPEAT-----IINVSS 139

Length = 245

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 70.1 bits (172), Expect = 4e-14
 Identities = 55/147 (37%), Positives = 70/147 (47%), Gaps = 26/147 (17%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTL-----KL 55
           ++ G +SGIGLE A  L  R   V+ A R             K DD AR+++L      L
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLAACR-------------KPDDVARMNSLGFTGILL 52

Query: 56  DLSSIASIKDFAQNFIAL-NLPLNILINNAGI-MFCPYQ-ISEDGIEMQFATNHIGHFLL 112
           DL    S++  A   IAL +  L  L NNAG  ++ P   IS   +E QF+TN  G   L
Sbjct: 53  DLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQL 112

Query: 113 TNLLLDTMNRTAKETGIEGRIVNLSSI 139
           T LLL  M         EGRIV  SS+
Sbjct: 113 TMLLLPAMLPHG-----EGRIVMTSSV 134

Length = 256

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 68.9 bits (169), Expect = 7e-14
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 34/208 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG SGIGL  AR        VII  R      EA++ +        + T+ LD+    S+
Sbjct: 12  GGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKEL------PNIHTIVLDVGDAESV 65

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISE-----DGIEMQFATNHIGHFLLTNLLLD 118
           +  A+  ++    L+ILINNAGI   P  + +     D  + +  TN IG   L    L 
Sbjct: 66  EALAEALLSEYPNLDILINNAGIQR-PIDLRDPASDLDKADTEIDTNLIGPIRLIKAFLP 124

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            + +       E  IVN+SS         G+ F  +     Y   KA         LH+ 
Sbjct: 125 HLKKQP-----EATIVNVSS---------GLAFVPMAANPVYCATKAA--------LHSY 162

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLF 206
            L+ R Q +   +    + P  + T L 
Sbjct: 163 TLALRHQLKDTGVEVVEIVPPAVDTELH 190

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 33/207 (15%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G   GIG  T + LA   A V+  +R           +++E     ++ + +DLS  
Sbjct: 11  LVTGAGKGIGRATVKALAKAGARVVAVSRT----QADLDSLVRECPG--IEPVCVDLSDW 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLD 118
            + +  A   +    P+++L+NNA + +  P+ +++++  +  F  N      ++ ++  
Sbjct: 65  DATE-EALGSVG---PVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVAR 120

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            M       G+ G IVN+SS A Q             +   Y   KA     L  ++ A 
Sbjct: 121 GM----IARGVPGSIVNVSSQASQRALT---------NHTVYCSTKA-ALDMLTKVM-AL 165

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNL 205
           EL          I  NSV+P ++MT++
Sbjct: 166 ELGPH------KIRVNSVNPTVVMTDM 186

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 67.2 bits (165), Expect = 1e-13
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 16/142 (11%)

Query: 4   GGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLI--LKEDDTARVDTLKLDLSSI 60
           GG  G+GL  AR LA   A H+++ +R    A  A +L+  L+    A V     D++  
Sbjct: 7   GGTGGLGLALARWLAAEGARHLVLVSRR-GPAPGAAELVAELEALG-AEVTVAACDVADR 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIM-FCPYQ-ISEDGIEMQFATNHIGHFLLTNLLLD 118
            ++        A   PL+ +++NAG++   P + ++ +  E   A    G + L  L  D
Sbjct: 65  DALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHELTRD 124

Query: 119 TMNRTAKETGIEGRIVNLSSIA 140
                       G  V  SS+A
Sbjct: 125 L---------DLGAFVLFSSVA 137

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 54/207 (26%), Positives = 81/207 (39%), Gaps = 30/207 (14%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGASGIG   A   A   A V +   + AA       +     TA V     D++  
Sbjct: 15  LVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATV----ADVADP 70

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPY----QISEDGIEMQFATNHIGHFLLTNLL 116
           A ++      +     L++L+NNAGI   P     +I+ +  E   A N  G F      
Sbjct: 71  AQVERVFDTAVERFGGLDVLVNNAGI-AGPTGGIDEITPEQWEQTLAVNLNGQFYFARAA 129

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           +  +    K +G  G I+ LSS+A +  Y G         R  Y+  K      L   L 
Sbjct: 130 VPLL----KASGHGGVIIALSSVAGRLGYPG---------RTPYAASKW-AVVGLVKSL- 174

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMT 203
           A EL          I  N++ PG++  
Sbjct: 175 AIELGPL------GIRVNAILPGIVRG 195

Length = 264

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 67.4 bits (165), Expect = 3e-13
 Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 32/200 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASGIGL  A+ LA   A V++A  +   A +  +         R   ++ D++S A +
Sbjct: 8   GGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAE---AAQGGPRALGVQCDVTSEAQV 64

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM---QFATNHIGHFLLTNLLLDTM 120
           +   +  +     L+I+++NAGI      I+E  +E        N  GHFL++      M
Sbjct: 65  QSAFEQAVLEFGGLDIVVSNAGI-ATSSPIAETSLEDWNRSMDINLTGHFLVSREAFRIM 123

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
               K  GI G IV  +S        G              +  AY  +K A       L
Sbjct: 124 ----KSQGIGGNIVFNAS--KNAVAPG-------------PNAAAYSAAKAA----EAHL 160

Query: 181 SRRFQEEG--VNITANSVHP 198
           +R    EG    I  N+V+P
Sbjct: 161 ARCLALEGGEDGIRVNTVNP 180

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 66.4 bits (163), Expect = 7e-13
 Identities = 59/216 (27%), Positives = 87/216 (40%), Gaps = 45/216 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIG   A  LA + A+V+I  A + A A      I       +   ++ D+S   S
Sbjct: 12  GASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEI--GALGGKALAVQGDVSDAES 69

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF---------ATNHIGHFLLT 113
           ++       A    ++IL+NNAGI         D + M+           TN  G F LT
Sbjct: 70  VERAVDEAKAEFGGVDILVNNAGIT-------RDNLLMRMKEEDWDRVIDTNLTGVFNLT 122

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKL 171
             +   M +        GRI+N+SS+       G         +A Y+  KA   G +K 
Sbjct: 123 KAVARPMMK-----QRSGRIINISSVVGL---MGNPG------QANYAASKAGVIGFTKS 168

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
                A EL+ R       IT N+V PG I T++  
Sbjct: 169 L----ARELASR------GITVNAVAPGFIETDMTD 194

Length = 248

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 67.0 bits (164), Expect = 8e-13
 Identities = 63/262 (24%), Positives = 101/262 (38%), Gaps = 56/262 (21%)

Query: 4   GGASGIGLETA-RVLAL----RKAHVIIAARNMAAANEARQLILKEDDTARV--DTLKLD 56
           G  SG+GL    R+LA      +  +I+A RN+  A  A + +L     ARV  D + +D
Sbjct: 8   GANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDYVLVD 67

Query: 57  LSSIASIKDFAQ---------NFIALNL--------------------PL------NILI 81
           LS++ S+   A+         +++ LN                     PL         I
Sbjct: 68  LSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTNPTYKI 127

Query: 82  NNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH 141
              G++    + +EDG+   F TN  GH+ L   L   +      +    +I+  SS+  
Sbjct: 128 QAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLL----CRSDGGSQIIWTSSLNA 183

Query: 142 QYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLI 201
              Y        + D         Y  SK    L +  L+R+F + GV   +  VHPG+ 
Sbjct: 184 SPKY------FSLEDIQHLKGPAPYSSSKYLVDLLSLALNRKFNKLGVY--SYVVHPGIC 235

Query: 202 MTNLFKHSAVVMRFLKFFSFFL 223
            TNL     ++  F    +  L
Sbjct: 236 TTNLT--YGILPPFTWTLALPL 255

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 66.2 bits (162), Expect = 9e-13
 Identities = 56/207 (27%), Positives = 79/207 (38%), Gaps = 32/207 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G ASGIGL  AR LA   A+V++       A  A ++    D    V  L  D++    I
Sbjct: 8   GAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVA--GDAGGSVIYLPADVTKEDEI 65

Query: 64  KDFAQNFIALNLPLNILINNAGIMFC-PYQ-ISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
            D      A    L+IL+NNAGI    P +    +  +   A      F      L  M 
Sbjct: 66  ADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAALPHM- 124

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE-L 180
              K+ G  GRI+N++S                +       K AY  +K     H    L
Sbjct: 125 ---KKQG-WGRIINIAS---------------AHGLVASPFKSAYVAAK-----HGLIGL 160

Query: 181 SRRFQEEGV--NITANSVHPGLIMTNL 205
           ++    E     IT N++ PG + T L
Sbjct: 161 TKVLALEVAEHGITVNAICPGYVRTPL 187

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 1e-12
 Identities = 59/211 (27%), Positives = 78/211 (36%), Gaps = 38/211 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A G+G   A  LA   A V       A A E    +       R   +  DL+  AS+
Sbjct: 14  GAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG--GRAHAIAADLADPASV 71

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           + F     A    L+ L+NNAGI       ++  D  +     N  G FL+    L  + 
Sbjct: 72  QRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLR 131

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKK--AYGQSKLANI----L 175
            + +     GRIVNL+S                 D A +   K  AY  SK A I     
Sbjct: 132 DSGR-----GRIVNLAS-----------------DTALWGAPKLGAYVASKGAVIGMTRS 169

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTNLF 206
            A EL  R       IT N++ PGL  T   
Sbjct: 170 LARELGGR------GITVNAIAPGLTATEAT 194

Length = 250

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 4  GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
          GGA GIGL TAR LA   A V I   + A A E         +   V    LD++  AS 
Sbjct: 12 GGARGIGLATARALAALGARVAIGDLDEALAKET------AAELGLVVGGPLDVTDPASF 65

Query: 64 KDFAQNFIALNLPLNILINNAGIM 87
            F     A   P+++L+NNAG+M
Sbjct: 66 AAFLDAVEADLGPIDVLVNNAGVM 89

Length = 273

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 64.6 bits (158), Expect = 3e-12
 Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 24/173 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE--DDTARVDTLKLDLSSIA 61
           GG+SGIG   A+ L    A+VII AR+ +   EA + I  E      +V  +  DLS   
Sbjct: 8   GGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADLSDYE 67

Query: 62  SIKDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDT 119
            ++      +    P ++++N AGI        ++ +  E     N+ G   + + +L  
Sbjct: 68  EVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVAHAVLPL 127

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLA 172
           M    KE    G IV +SS A       GI         GYS   AY  SK A
Sbjct: 128 M----KEQR-PGHIVFVSSQAALV----GI--------YGYS---AYCPSKFA 160

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 65.6 bits (160), Expect = 5e-12
 Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 25/198 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA GIG ETAR LA   AHV++A  N+ AA      I  +    R   LK+D++   ++
Sbjct: 421 GGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAV 480

Query: 64  KD-FAQNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           K  FA   +A    ++I++NNAGI       + +    ++       G+FL+        
Sbjct: 481 KAAFADVALAYG-GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVA----REA 535

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            R  +E G+ G IV ++S    Y  K                  AY  +K A    A  L
Sbjct: 536 FRQMREQGLGGNIVFIASKNAVYAGKNAS---------------AYSAAKAAEAHLARCL 580

Query: 181 SRRFQEEGVNITANSVHP 198
           +      G+ +  N+V+P
Sbjct: 581 AAEGGTYGIRV--NTVNP 596

Length = 676

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 63.8 bits (156), Expect = 5e-12
 Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 35/213 (16%)

Query: 2   LAGGASGIGLETARVLALR--KAHVIIAARNMAAANEARQLILKEDDTA--RVDTLKLDL 57
           L G + GIG   A  L  R   + V++ AR+     E     LKE+     RV T+K DL
Sbjct: 4   LTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQE-----LKEELRPGLRVTTVKADL 58

Query: 58  SSIASIKDFAQNFIALNLPLNILINNAGIM--FCPY-QISEDGIEMQFATNHIGHFLLTN 114
           S  A ++   +    L+   ++LINNAG +        I  D ++  F  N      LT+
Sbjct: 59  SDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTS 118

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
            LL    R  K+ G++  +VN+SS A    +KG           G      Y  SK A  
Sbjct: 119 TLL----RAFKKRGLKKTVVNVSSGAAVNPFKG----------WG-----LYCSSKAA-- 157

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
              +   R    E  ++   S  PG++ T++ +
Sbjct: 158 --RDMFFRVLAAEEPDVRVLSYAPGVVDTDMQR 188

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 63.5 bits (155), Expect = 9e-12
 Identities = 54/209 (25%), Positives = 78/209 (37%), Gaps = 26/209 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASGIGL TA++L  + A V I  RN      A +L        +   ++ D++S   +
Sbjct: 7   GGASGIGLATAKLLLKKGAKVAILDRN-ENPGAAAELQAINPKV-KATFVQCDVTSWEQL 64

Query: 64  -KDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTNLLLD 118
              F +        ++ILINNAGI     +          E     N  G    T L L 
Sbjct: 65  AAAFKKAIEKFG-RVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYLALH 123

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            M++     G  G IVN+ S+A  Y          +           Y  SK   +    
Sbjct: 124 YMDKNKGGKG--GVIVNIGSVAGLYP----APQFPV-----------YSASKHGVVGFTR 166

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFK 207
            L+    E    +  N++ PG   T L  
Sbjct: 167 SLADLL-EYKTGVRVNAICPGFTNTPLLP 194

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 52/213 (24%), Positives = 77/213 (36%), Gaps = 48/213 (22%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
             +SGIGL  AR LA   A V I ARN      A   +      A V  +  DL+    I
Sbjct: 8   AASSGIGLAIARALAREGARVAICARNRENLERAASELRAGG--AGVLAVVADLTDPEDI 65

Query: 64  KDFAQNFIALNLPLNILINNAG----IMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
               +        ++IL+NNAG      F   +++++     F    +    +   +L  
Sbjct: 66  DRLVEKAGDAFGRVDILVNNAGGPPPGPF--AELTDEDWLEAFDLKLLSVIRIVRAVLPG 123

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND-------RAGYSDKKAYGQSKLA 172
           M          GRIVN+SS+            +   +       RAG           L 
Sbjct: 124 MKERGW-----GRIVNISSLT---------VKEPEPNLVLSNVARAG-----------LI 158

Query: 173 NIL--HANELSRRFQEEGVNITANSVHPGLIMT 203
            ++   + EL+         +T NSV PG I T
Sbjct: 159 GLVKTLSRELAPD------GVTVNSVLPGYIDT 185

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 44/213 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G ASGIGLE A  LA   A V+IA  N  AA  A + + K     +   + +D++   +I
Sbjct: 11  GAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG--GKAIGVAMDVTDEEAI 68

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFAT---------NHIGHFLLTN 114
                  +     ++IL+NNAGI     Q     IE  F T            G FL T 
Sbjct: 69  NAGIDYAVETFGGVDILVNNAGI-----QHVAP-IE-DFPTEKWKKMIAIMLDGAFLTTK 121

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
             L  M    K  G  GRI+N++S               ++   G + K AY  +K   I
Sbjct: 122 AALPIM----KAQGG-GRIINMAS---------------VHGLVGSAGKAAYVSAKHGLI 161

Query: 175 LHANELSRRFQEEGV--NITANSVHPGLIMTNL 205
                L++    EG    +T N++ PG + T L
Sbjct: 162 ----GLTKVVALEGATHGVTVNAICPGYVDTPL 190

Length = 258

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 43/142 (30%), Positives = 58/142 (40%), Gaps = 11/142 (7%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           +L G ASGIG   A       A V+IA    A A  A   I           + LD++  
Sbjct: 10  LLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQ 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI--MFCPYQISEDGIEMQFATNHIGHFLLTNLLLD 118
            SI       +     ++IL NNA +  M     IS D  +  FA N  G F L   +  
Sbjct: 65  DSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVAR 124

Query: 119 TMNRTAKETGIEGRIVNLSSIA 140
            M     E G  G+I+N++S A
Sbjct: 125 HM----VEQGRGGKIINMASQA 142

Length = 257

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 45/173 (26%), Positives = 64/173 (36%), Gaps = 26/173 (15%)

Query: 2   LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           L G + GIG   A  LA   A +++  RN         L  +     R   +  DL+S A
Sbjct: 10  LTGASGGIGQALAEALAAAGARLLLVGRNAEK---LEALAARLPYPGRHRWVVADLTSEA 66

Query: 62  SIKDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDT 119
             +            +N+LINNAG+  F        + IE   A N      LT  LL  
Sbjct: 67  GREAVLA-RAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPL 125

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLA 172
           +            +VN+ S     T+ G I +       GY+   +Y  SK A
Sbjct: 126 LRAQP-----SAMVVNVGS-----TF-GSIGY------PGYA---SYCASKFA 158

Length = 263

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 62.9 bits (153), Expect = 1e-11
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 33/209 (15%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  +G+G      + L +A   I     +  +E +Q +  E    R  +L  DLS I
Sbjct: 9   LVTGANTGLG--QGIAVGLAEAGADIVGAGRSEPSETQQQV--EALGRRFLSLTADLSDI 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNL----- 115
            +IK    + +     ++IL+NNAGI+        D  E  F+       +  NL     
Sbjct: 65  EAIKALVDSAVEEFGHIDILVNNAGIIR-----RADAEE--FSEKDWDDVMNVNLKSVFF 117

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
           L     +   + G  G+I+N   IA   +++GGIR         Y+  K +  + L  +L
Sbjct: 118 LTQAAAKHFLKQGRGGKIIN---IASMLSFQGGIRV------PSYTASK-HAVAGLTKLL 167

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTN 204
            ANE + +       I  N++ PG + TN
Sbjct: 168 -ANEWAAK------GINVNAIAPGYMATN 189

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 33/246 (13%)

Query: 1   MLAGGASGIGLETARVLALRKAHVII----AARNMAAANEARQLILKEDDTARVDTLKLD 56
           ++ GG+ G+G   A  LA   A VI+      R  A A+     I      A    L  D
Sbjct: 10  LITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG--LAFD 67

Query: 57  LSSIASIKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTN 114
           +   A+ +      +     L+IL+NNAGI     + ++S +  +     N  G F +T 
Sbjct: 68  VRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQ 127

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
             L  M R  +     GRIVN++S+A     +G +          Y+  KA   G +K  
Sbjct: 128 AALPPMIRARRG----GRIVNIASVAGVRGNRGQV---------NYAASKAGLIGLTKTL 174

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAA 232
               ANEL+ R       IT N+V PG I T +  ++A     L            + AA
Sbjct: 175 ----ANELAPR------GITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAA 224

Query: 233 TTCYVA 238
              ++ 
Sbjct: 225 LVAFLV 230

Length = 249

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 62.2 bits (151), Expect = 3e-11
 Identities = 62/209 (29%), Positives = 88/209 (42%), Gaps = 24/209 (11%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSS 59
           ++ GG+ GIG  TA +LA     V +   +N+ AA E   LI +    A V  L+ D+S 
Sbjct: 5   LVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFV--LQADISD 62

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNLL 116
              +          + PL  L+NNAGI+F       ++ + I    +TN  G+FL     
Sbjct: 63  ENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREA 122

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           +  M    K  G  G IVN+SS A +    G            Y D   Y  SK A    
Sbjct: 123 VKRMAL--KHGGSGGAIVNVSSAASRLGAPG-----------EYVD---YAASKGAIDTL 166

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNL 205
              LS     +G+ +  N V PG I T +
Sbjct: 167 TTGLSLEVAAQGIRV--NCVRPGFIYTEM 193

Length = 247

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 62.0 bits (151), Expect = 3e-11
 Identities = 59/213 (27%), Positives = 82/213 (38%), Gaps = 49/213 (23%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA G+GL  AR+L    A V+++        E +    +  D AR     LD++     
Sbjct: 12  GGARGLGLAHARLLVAEGAKVVLSDIL---DEEGQAAAAELGDAARF--FHLDVTDEDGW 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF----ATNHIGHFLLTNLLLDT 119
                        L++L+NNAGI+       E     ++      N  G FL T  ++  
Sbjct: 67  TAVVDTAREAFGRLDVLVNNAGILTGGT--VETTTLEEWRRLLDINLTGVFLGTRAVIPP 124

Query: 120 MNRTAKETGIEGRIVNLSSIA--------HQYT-YKGGIRFQKINDRAGYSDKKAYGQSK 170
           M    KE G  G I+N+SSI           Y   KG +R                G +K
Sbjct: 125 M----KEAG-GGSIINMSSIEGLVGDPALAAYNASKGAVR----------------GLTK 163

Query: 171 LANILHANELSRRFQEEGVNITANSVHPGLIMT 203
            A    A E +     +G  I  NSVHPG I T
Sbjct: 164 SA----ALECAT----QGYGIRVNSVHPGYIYT 188

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 61.3 bits (149), Expect = 4e-11
 Identities = 58/204 (28%), Positives = 81/204 (39%), Gaps = 34/204 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG   A  LA R A V+ AARN AA +      L  +       L+LD+   A+I
Sbjct: 16  GASSGIGRACAVALAQRGARVVAAARNAAALDR-----LAGETGCEP--LRLDVGDDAAI 68

Query: 64  KDFAQNFIALNLPLNILINNAGI--MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +       A     + L+N AGI  +     ++ +G +   A N  G  L+   +   M 
Sbjct: 69  RAAL----AAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMI 124

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                 G  G IVN+SS A        +         G  D  AY  SK A       L 
Sbjct: 125 A----AGRGGSIVNVSSQA-------ALV--------GLPDHLAYCASKAALDAITRVLC 165

Query: 182 RRFQEEGVNITANSVHPGLIMTNL 205
                 G  I  NSV+P + +T +
Sbjct: 166 VELGPHG--IRVNSVNPTVTLTPM 187

Length = 245

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 54/213 (25%), Positives = 82/213 (38%), Gaps = 36/213 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   A  LA   A+++I +RN   A EA+QLI KE           D+S   +I
Sbjct: 12  GASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEG--VEATAFTCDVSDEEAI 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ-------FATNHIGHFLLTNLL 116
           K   +        ++IL+NNAGI            E            N  G F ++  +
Sbjct: 70  KAAVEAIEEDFGKIDILVNNAGI-----IRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAV 124

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              M +        G+I+N+ S+    +  GG           Y+  K  G + L   L 
Sbjct: 125 ARHMIKQGH-----GKIINICSL---LSELGGPPV------PAYAASKG-GVAGLTKAL- 168

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHS 209
           A E +R        I  N++ PG   T + +  
Sbjct: 169 ATEWARH------GIQVNAIAPGYFATEMTEAV 195

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 59.1 bits (144), Expect = 2e-10
 Identities = 53/206 (25%), Positives = 74/206 (35%), Gaps = 39/206 (18%)

Query: 4   GGASGIGLETARVLALRKAH-VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G   GIG      L  R A  V  AAR+  +           D   RV  L+LD++  AS
Sbjct: 13  GANRGIGRAFVEQLLARGAAKVYAAARDPESV---------TDLGPRVVPLQLDVTDPAS 63

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQI---SEDGIEMQFATNHIGHFLLTNLLLDT 119
           +   A         + IL+NNAGI      +    ED +  +  TN+ G   +       
Sbjct: 64  VAAAA----EAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPV 119

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           +          G IVN+ S+     +              YS  KA   S L   L A E
Sbjct: 120 LAANGG-----GAIVNVLSVLSWVNFPNL---------GTYSASKAAAWS-LTQALRA-E 163

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNL 205
           L+ +            VHPG I T++
Sbjct: 164 LAPQ------GTRVLGVHPGPIDTDM 183

Length = 238

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 3e-10
 Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 26/214 (12%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G +SG+G   A+VLA   A V++A+R +    E R  I  E   A V  + LD++  
Sbjct: 13  LVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV--VSLDVTDY 70

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI--MFCPYQISEDGIEMQFATNHIGHFLLTNLLLD 118
            SIK    +       ++IL+NN+G+        ++    +  F TN  G F +   +  
Sbjct: 71  QSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAK 130

Query: 119 TMNRTAKETG---IEGRIVNLSSIAHQYTYKGGIR-FQKINDRAGYSDKKAYGQSKLANI 174
            M   AK  G     GRI+N++S+A       G+R   +I           Y  SK A +
Sbjct: 131 RMIARAKGAGNTKPGGRIINIASVA-------GLRVLPQIG---------LYCMSKAAVV 174

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
                ++  +   G+N+  N++ PG I T +  H
Sbjct: 175 HMTRAMALEWGRHGINV--NAICPGYIDTEINHH 206

Length = 258

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 15/145 (10%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG  TA  +A   A V + ARN  A +E    I  +  TA   T   DL+  A++
Sbjct: 378 GASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYT--CDLTDSAAV 435

Query: 64  KDFAQNFIALNLPLNILINNAG------IMFCPYQISEDGIEMQFATNHIGHFLLTNLLL 117
               ++ +A +  ++ L+NNAG      +         D  E   A N+ G   L   LL
Sbjct: 436 DHTVKDILAEHGHVDYLVNNAGRSIRRSVEN-STDRFHD-YERTMAVNYFGAVRLILGLL 493

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQ 142
             M    +     G +VN+SSI  Q
Sbjct: 494 PHM--RERRF---GHVVNVSSIGVQ 513

Length = 657

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 55/202 (27%), Positives = 80/202 (39%), Gaps = 26/202 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A G+G E AR LA   AHV++  RN A    A   +      A  + L  D++   ++
Sbjct: 18  GSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAA--EALAFDIADEEAV 75

Query: 64  KDFAQNFIALNLPLNILINNAG--IMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                   A +  L+IL+NN G        ++ +  I     T+ +   LL+ L    M 
Sbjct: 76  AAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMK 135

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           R        GRI+ ++SIA Q    G          A Y   K  G + L   L A E  
Sbjct: 136 RQGY-----GRIIAITSIAGQVARAGD---------AVYPAAKQ-GLTGLMRAL-AAEFG 179

Query: 182 RRFQEEGVNITANSVHPGLIMT 203
                    IT+N++ PG   T
Sbjct: 180 PH------GITSNAIAPGYFAT 195

Length = 256

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 58.6 bits (142), Expect = 4e-10
 Identities = 50/206 (24%), Positives = 73/206 (35%), Gaps = 35/206 (16%)

Query: 4   GGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G   GIG      L    A  V  A R+  +A       L      +V  L+LD++   S
Sbjct: 10  GANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAH-----LVAKYGDKVVPLRLDVTDPES 64

Query: 63  IKDFAQNFIALNLPLNILINNAGIM-FCPYQISE--DGIEMQFATNHIGHFLLTNLLLDT 119
           IK  A         ++++INNAG++           + ++ +   N  G   L       
Sbjct: 65  IKAAAAQAK----DVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLAQAFAPV 120

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           +          G IVNL+S+A    +              YS  K+   S L   L A E
Sbjct: 121 LKANGG-----GAIVNLNSVASLKNFPA---------MGTYSASKSAAYS-LTQGLRA-E 164

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNL 205
           L+             SVHPG I T +
Sbjct: 165 LA------AQGTLVLSVHPGPIDTRM 184

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 58.8 bits (143), Expect = 4e-10
 Identities = 52/150 (34%), Positives = 73/150 (48%), Gaps = 20/150 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG  TAR LA +   V  AAR +          +++  +  V  L LD++  ASI
Sbjct: 10  GASSGIGKATARRLAAQGYTVYGAARRVDK--------MEDLASLGVHPLSLDVTDEASI 61

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISED-GIE---MQFATNHIGHFLLTNLLLDT 119
           K      IA    +++L+NNAG  +  Y   ED  I+    QF  N  G   LT L+L  
Sbjct: 62  KAAVDTIIAEEGRIDVLVNNAG--YGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPH 119

Query: 120 MNRTAKETGIEGRIVNLSSIAHQ-YTYKGG 148
           M R  +     GRI+N+SS+  + YT  G 
Sbjct: 120 M-RAQR----SGRIINISSMGGKIYTPLGA 144

Length = 273

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 58/207 (28%), Positives = 78/207 (37%), Gaps = 30/207 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  +GIG   A  LA   A V++A  +  AA      I       RV     D++    +
Sbjct: 10  GAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRV-----DVTDEQQV 64

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM---QFATNHIGHFLLTNLLLDTM 120
               +  +     L++L+NNAG M     I +  + +     A N  G FL        M
Sbjct: 65  AALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHAAPRM 124

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                  G  G IVNLSSIA Q               +G     AYG SK A       L
Sbjct: 125 ----IARG-GGSIVNLSSIAGQ---------------SGDPGYGAYGASKAAIRNLTRTL 164

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFK 207
           +   +  G  I  N++ PGLI T L  
Sbjct: 165 AAELRHAG--IRCNALAPGLIDTPLLL 189

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 58.3 bits (141), Expect = 5e-10
 Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSS 59
           ++ G + GIG  TA + A R   V +   RN  AA    Q I ++   A           
Sbjct: 6   IITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEA----------- 54

Query: 60  IASIKDFAQNFIALNL---------PLNILINNAGIMFCPYQISE-DGIEMQ--FATNHI 107
           +A   D A     L L          L+ L+NNAGI+    ++ + D   +   FATN +
Sbjct: 55  LAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVV 114

Query: 108 GHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYG 167
           G FL     +  M  + +  G  G IVN+SS+A            ++     Y D   Y 
Sbjct: 115 GSFLCAREAVKRM--STRHGGRGGAIVNVSSMA-----------ARLGSPGEYID---YA 158

Query: 168 QSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL 205
            SK A       L++    EG+ +  N+V PG+I T +
Sbjct: 159 ASKGAIDTMTIGLAKEVAAEGIRV--NAVRPGVIYTEI 194

Length = 248

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 31/211 (14%)

Query: 4   GGASGIGLETARVLALRKAHV-IIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA- 61
           G + GIG   A  LA R   + I    +   A E    +L      R    + D+  ++ 
Sbjct: 8   GASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAG--RRAIYFQADIGELSD 65

Query: 62  --SIKDFAQNFIALNLPLNILINNAGIMFCP----YQISEDGIEMQFATNHIGHFLLTNL 115
             ++ D A         L+ L+NNAGI   P      ++ED  +   A N  G F LT  
Sbjct: 66  HEALLDQAWEDFG---RLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQA 122

Query: 116 LLDTM-NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
           +   M  +  +  G    I+ ++S               IN      ++  Y  SK    
Sbjct: 123 VARRMVEQPDRFDGPHRSIIFVTS---------------INAYLVSPNRGEYCISKAGLS 167

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNL 205
           +    L+ R  +EG  I  + + PGLI T++
Sbjct: 168 MATRLLAYRLADEG--IAVHEIRPGLIHTDM 196

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 8e-10
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G A GIG   AR  A   A V +A  + A A  A   I ++   ARV  +  D++  
Sbjct: 11  LVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA 70

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI-MFC-PYQISED 96
           AS+            PL++L+NNAGI +F  P  ++++
Sbjct: 71  ASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDE 108

Length = 260

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 28/204 (13%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANE-ARQLILKEDDTARVDTLKLDLSS 59
           ++ GG+ GIG   A+      A VII+AR   A  + A +L    +  A    +  DLSS
Sbjct: 10  LVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIA----IPADLSS 65

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIMF-CPY-QISEDGIEMQFATNHIGHFLLTNLLL 117
              I+         +  L++L+NNAG  +  P     E G +     N    F LT  LL
Sbjct: 66  EEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQALL 125

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
             + R A       R++N+ SIA       GI            +  +YG SK A  +H 
Sbjct: 126 PLL-RAAATAENPARVINIGSIA-------GI-------VVSGLENYSYGASKAA--VH- 167

Query: 178 NELSRRFQEE--GVNITANSVHPG 199
            +L+R+  +E  G +IT N++ PG
Sbjct: 168 -QLTRKLAKELAGEHITVNAIAPG 190

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 1e-09
 Identities = 55/206 (26%), Positives = 86/206 (41%), Gaps = 29/206 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASGIG   A + A + A V +  R+   A  A QL            L  D+S   S+
Sbjct: 22  GGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQL-----LGGNAKGLVCDVSDSQSV 76

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPYQ-ISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +      I+    ++IL+N+AG+ +  P + +SE+  +     N  G FL+   +   M 
Sbjct: 77  EAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMI 136

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                    G+IVNL+S A      G +               AY  SK   +     L+
Sbjct: 137 AAGG-----GKIVNLASQA------GVV---------ALERHVAYCASKAGVVGMTKVLA 176

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFK 207
             +   G  IT N++ P +++T L K
Sbjct: 177 LEWGPYG--ITVNAISPTVVLTELGK 200

Length = 255

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 32/216 (14%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G A  IG    + L    A +I+A  N  A  + ++  L      RV  L+LD++S 
Sbjct: 6   LITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEE-LTNLYKNRVIALELDITSK 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPY-----QISEDGIEMQFATNHIGHFLLTNL 115
            SIK+  ++++     ++ILINNA      +     +   +        N  G FL +  
Sbjct: 65  ESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFLCSQA 124

Query: 116 LLDTMNRTAKETGIEGRIVNLSSI-----AHQYTYKGGIRFQKINDRAGYSDKKAYGQSK 170
            +    +  K     G I+N++SI          Y+    +  +           Y   K
Sbjct: 125 FIKLFKKQGK-----GSIINIASIYGVIAPDFRIYENTQMYSPVE----------YSVIK 169

Query: 171 LANILHANELSRRFQEE--GVNITANSVHPGLIMTN 204
            A I+H   L++   +      I  N++ PG I+ N
Sbjct: 170 -AGIIH---LTKYLAKYYADTGIRVNAISPGGILNN 201

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 29/208 (13%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G ++GIG  +A  LA   A+V+       A +E    I      A      +D+S  
Sbjct: 10  VITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKA--KAYHVDISDE 66

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ---FATNHIGHFLLTNLLL 117
             +KDFA         +++L NNAG+     +I E  +++     A +  G FL+T +LL
Sbjct: 67  QQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLL 126

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
             M     E G  G I+N SS +                +A    +  Y  +K A I   
Sbjct: 127 PLM----MEQG--GSIINTSSFS---------------GQAADLYRSGYNAAKGAVINFT 165

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNL 205
             ++  +  +G  I AN++ PG I T L
Sbjct: 166 KSIAIEYGRDG--IRANAIAPGTIETPL 191

Length = 272

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 13/140 (9%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SG G   AR  A   A V+IA  N      A ++     + A    ++ D++  A +
Sbjct: 12  GAGSGFGEGIARRFAQEGARVVIADINADG---AERVAADIGEAA--IAIQADVTKRADV 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +   +  ++    L+IL+NNAGI        ++ E+  +  FA N    +L    L+  M
Sbjct: 67  EAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQALVPHM 126

Query: 121 NRTAKETGIEGRIVNLSSIA 140
                E    G I+N++S A
Sbjct: 127 -----EEQGGGVIINIASTA 141

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 28/207 (13%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE--DDTARVDTLKLDLS 58
           ++ G  SGIGL  AR L      V + AR      E     +KE  +     D    D+ 
Sbjct: 7   LVTGATSGIGLAIARRLGKEGLRVFVCARG----EEGLATTVKELREAGVEADGRTCDVR 62

Query: 59  SIASIKDFAQNFIALNLPLNILINNAGIM--FCPYQISEDGIEMQFATNHIGHFLLTNLL 116
           S+  I+      +A   P+++L+NNAG        +++++       TN  G F +T  +
Sbjct: 63  SVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEV 122

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           L       + T   GRI+N++S   +         Q +   A YS  K +G       L 
Sbjct: 123 LKAGGMLERGT---GRIINIASTGGK---------QGVVHAAPYSASK-HGVVGFTKAL- 168

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMT 203
             EL+R        IT N+V PG + T
Sbjct: 169 GLELAR------TGITVNAVCPGFVET 189

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 51/207 (24%), Positives = 73/207 (35%), Gaps = 35/207 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G   GIG   AR L      VI         A +  +         +V   +LD++    
Sbjct: 9   GAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEE--YGFTEDQVRLKELDVTDTEE 66

Query: 63  IKDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTNLLLD 118
             +          P++IL+NNAGI    +F   ++S         TN    F +T  L  
Sbjct: 67  CAEALAEIEEEEGPVDILVNNAGITRDSVF--KRMSHQEWNDVINTNLNSVFNVTQPLFA 124

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            M     E G  GRI+N+SS               +N   G   +  Y  +K   I    
Sbjct: 125 AM----CEQG-YGRIINISS---------------VNGLKGQFGQTNYSAAKAGMI---- 160

Query: 179 ELSRRFQEEGV--NITANSVHPGLIMT 203
             ++    EG    IT N + PG I T
Sbjct: 161 GFTKALASEGARYGITVNCIAPGYIAT 187

Length = 245

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 56.0 bits (135), Expect = 3e-09
 Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 25/212 (11%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GG SG+GL TA  LA   A + +   N      A+  +L+    A V  +K D+S  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI---MFCPYQISEDGIEMQFATNHIGHFLLTNLLL 117
           A ++ +    +     ++   NNAGI            D  +   + N  G F     +L
Sbjct: 67  AQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKVL 126

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
             M    +E G  G IVN +S+       GGIR        G  ++  Y  +K   +   
Sbjct: 127 KVM----REQGS-GMIVNTASV-------GGIR--------GVGNQSGYAAAKHGVVGLT 166

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFKHS 209
              +  + + G+ I  N++ PG I+T + + S
Sbjct: 167 RNSAVEYGQYGIRI--NAIAPGAILTPMVEGS 196

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187633 cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reductase (KR) domain of fungal-type fatty acid synthase (fFAS)-like, classical (c)-like SDRs

 Score = 55.8 bits (134), Expect = 3e-09
 Identities = 37/209 (17%), Positives = 65/209 (31%), Gaps = 18/209 (8%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           +   G   IG E  + L    A V +     +         +     A    L +   + 
Sbjct: 3   ITGAGDGSIGAEVLQGLLNGGAKVYVTTSRFSRQVTKYYQDIYAACGAAGSVLIVVPFNQ 62

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPY-QISEDGIEMQF--ATNHIGHFLLTNLLL 117
            S +D     I +   +N L      ++ P+  I E GIE+    + + + H ++   LL
Sbjct: 63  GSKQDVEALAIGIYDTVNGLG-WDLDLYGPFAAIPETGIEIPAIDSKSEVAHRIMLTNLL 121

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQY-TYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
                          +V +        T    +      +   + D  AY +SKL     
Sbjct: 122 RPK-----------GLVKIQKQLRGQETRPAQVILPFSPNHGTFGDDGAYSESKLHLETL 170

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNL 205
            N  +      G ++T    H G     L
Sbjct: 171 FNRWASESW--GNDLTVCGAHIGWTRGTL 197

KR domain of FAS, including the fungal-type multidomain FAS alpha chain, and the single domain daunorubicin C-13 ketoreductase. Fungal-type FAS is a heterododecameric FAS composed of alpha and beta multifunctional polypeptide chains. The KR, an SDR family member is located centrally in the alpha chain. KR catalyzes the NADP-dependent reduction of ketoacyl-ACP to hydroxyacyl-ACP. KR shares the critical active site Tyr of the classical SDR and has partial identity of the active site tetrad, but the upstream Asn is replaced in KR by Met. As in other SDRs, there is a glycine rich NAD(P)-binding motif, but the pattern found in KR does not match the classical SDRs, and is not strictly conserved within this group. Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Single domain daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 55.9 bits (135), Expect = 4e-09
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 36/208 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G +SGIG   A  LA   A+V++  R+   AA E  + I  +    +   ++ D+S    
Sbjct: 10  GASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEI--KAVGGKAIAVQADVSKEED 67

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFA-------TNHIGHFLLTNL 115
           +    Q+ I     L+IL+NNAG+     Q      EM           N  G FL    
Sbjct: 68  VVALFQSAIKEFGTLDILVNNAGL-----QGDASSHEMTLEDWNKVIDVNLTGQFLCARE 122

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
            +    ++     I+G+I+N+SS+ H+                G+     Y  SK    +
Sbjct: 123 AIKRFRKSK----IKGKIINMSSV-HEKI-----------PWPGHV---NYAASKGGVKM 163

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMT 203
               L++ +  +G  I  N++ PG I T
Sbjct: 164 MTKTLAQEYAPKG--IRVNAIAPGAINT 189

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 55.6 bits (134), Expect = 4e-09
 Identities = 60/214 (28%), Positives = 86/214 (40%), Gaps = 34/214 (15%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSS 59
           ++ G + GIG  TA + A R   V I  AR+ AAA E    +       R   +  D+++
Sbjct: 6   LITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV--RAAGGRACVVAGDVAN 63

Query: 60  ----IASIKDFAQNFIALNLPLNILINNAGIMFCPYQ----ISEDGIEMQFATNHIGHFL 111
               IA        F      L+ L+NNAGI+  P      +    +   F TN +G +L
Sbjct: 64  EADVIAMFDAVQSAFGR----LDALVNNAGIV-APSMPLADMDAARLRRMFDTNVLGAYL 118

Query: 112 LTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKL 171
                   ++      G  G IVN+SSIA         R    N+   Y+  K  G    
Sbjct: 119 CAREAARRLSTDRGGRG--GAIVNVSSIAS--------RLGSPNEYVDYAGSK--GAVDT 166

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMTNL 205
             +  A EL       GV +  N+V PGLI T +
Sbjct: 167 LTLGLAKELGP----HGVRV--NAVRPGLIETEI 194

Length = 248

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 55.5 bits (134), Expect = 5e-09
 Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 38/213 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA-RVDTLKLDLSSIAS 62
           G +SGIG  TA + A   A + +  R+     E RQ  L+   +  ++  +  DL+    
Sbjct: 10  GSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADLTEEEG 69

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ--------FATNHIGHFLLTN 114
                   +A    L+IL+NNAGI+      ++ G E Q           N      LT 
Sbjct: 70  QDRIISTTLAKFGRLDILVNNAGIL------AKGGGEDQDIEEYDKVMNLNLRAVIYLTK 123

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
           L +  + +T      +G IVN+SS+A   ++ G +                Y  SK A  
Sbjct: 124 LAVPHLIKT------KGEIVNVSSVAGGRSFPGVL---------------YYCISKAALD 162

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
                 +     +GV +  NSV PG+I+T   +
Sbjct: 163 QFTRCTALELAPKGVRV--NSVSPGVIVTGFHR 193

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 55.0 bits (133), Expect = 6e-09
 Identities = 46/165 (27%), Positives = 67/165 (40%), Gaps = 24/165 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASG+GL T   L  + A V+I        N   + + K  D      + +D++S   +
Sbjct: 9   GGASGLGLATVERLLAQGAKVVILDLP----NSPGETVAKLGD--NCRFVPVDVTSEKDV 62

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGI------EMQFA--TNHIGHFLLTNL 115
           K       A    L+I++N AGI       ++ G         Q     N IG F +  L
Sbjct: 63  KAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTFNVIRL 122

Query: 116 LLDTMNRTAKETGIE-GRIVNLSSIA------HQYTY---KGGIR 150
               M +   + G E G I+N +S+A       Q  Y   KGGI 
Sbjct: 123 AAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIV 167

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 55.1 bits (133), Expect = 6e-09
 Identities = 52/214 (24%), Positives = 79/214 (36%), Gaps = 39/214 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG+ GIG   A  LA R A V+I   ++  AA E    I  E+   +   ++ D+S    
Sbjct: 5   GGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEI--EELGGKAVVVRADVSQPQD 62

Query: 63  IKDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +++           L++L++NA    F P  +++    + +  TN              M
Sbjct: 63  VEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAKLM 122

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH---- 176
                     GRIV +SS+                    Y    A G +K A  L     
Sbjct: 123 RERG-----GGRIVAISSLGSIRAL------------PNYL---AVGTAKAA--LEALVR 160

Query: 177 --ANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
             A EL  R       I  N+V PG+I T+   H
Sbjct: 161 YLAVELGPR------GIRVNAVSPGVIDTDALAH 188

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 7e-09
 Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 11/147 (7%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ GIG   A  L      V I AR+     EA   +  +     V  L  D+   A +
Sbjct: 13  GGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADV 69

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPYQ-ISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +      +A    L++LI NAG+  F P + ++ +   +   TN  G F      +  + 
Sbjct: 70  QRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALK 129

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGG 148
           R        G I+N+SS+A    + GG
Sbjct: 130 RG------GGYIINISSLAGTNFFAGG 150

Length = 237

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 54.7 bits (132), Expect = 8e-09
 Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 28/217 (12%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G A GIG   A  LA    ++++A  N+  A ++    + E     V  +  D++  
Sbjct: 6   IITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAV-AVGADVTDK 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQ----ISEDGIEMQFATNHIGHFLLTNLL 116
             ++      +      ++++NNAGI   P      I+E+ ++  +A N  G        
Sbjct: 65  DDVEALIDQAVEKFGSFDVMVNNAGI--APITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
                   K+ G  G+I+N SSIA       G++        G+ +  AY  SK A    
Sbjct: 123 ARQF----KKLGHGGKIINASSIA-------GVQ--------GFPNLGAYSASKFAVRGL 163

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM 213
               ++    +G  IT N+  PG++ T ++ +    +
Sbjct: 164 TQTAAQELAPKG--ITVNAYAPGIVKTEMWDYIDEEV 198

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 54.4 bits (131), Expect = 9e-09
 Identities = 52/204 (25%), Positives = 75/204 (36%), Gaps = 32/204 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  G+G  TA  LA R A V +  R   AA  ++ L     D  R+    +DL    + 
Sbjct: 14  GGFGGLGRATAAWLAARGARVALIGRG--AAPLSQTLPGVPADALRIG--GIDLVDPQAA 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDG----IEMQFATNHIGHFLLTNLLLDT 119
           +            L+ L+N AG     +    DG     +  +  N       +   L  
Sbjct: 70  RRAVDEVNRQFGRLDALVNIAGAF--VWGTIADGDADTWDRMYGVNVKTTLNASKAALPA 127

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           +  +       GRIVN+ + A      G            Y+  KA G ++L   L A E
Sbjct: 128 LTASGG-----GRIVNIGAGAALKAGPG---------MGAYAAAKA-GVARLTEAL-AAE 171

Query: 180 LSRRFQEEGVNITANSVHPGLIMT 203
           L  R       IT N+V P +I T
Sbjct: 172 LLDR------GITVNAVLPSIIDT 189

Length = 239

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 55/220 (25%), Positives = 80/220 (36%), Gaps = 54/220 (24%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTAR-----VDTLKLDLS 58
           G +SGIG   AR L      V    R             KE+D A      ++  +LD +
Sbjct: 11  GCSSGIGAYCARALQSDGWRVFATCR-------------KEEDVAALEAEGLEAFQLDYA 57

Query: 59  SIASIKDFAQNFIAL-NLPLNILINN-----AGIMFCPYQISEDGIEMQFATNHIGHFLL 112
              SI       + L    L+ L NN      G +     +  + +  QF  N  G   L
Sbjct: 58  EPESIAALVAQVLELSGGRLDALFNNGAYGQPGAV---EDLPTEALRAQFEANFFGWHDL 114

Query: 113 TNLLLDTMNRTAKETGIEGRIVNLSSIAH--QYTYKGGIRFQKINDRAGYSDKKAYGQSK 170
           T  ++  M +       +GRIV  SSI       Y+G                 AY  SK
Sbjct: 115 TRRVIPVMRKQG-----QGRIVQCSSILGLVPMKYRG-----------------AYNASK 152

Query: 171 LANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA 210
            A  +    L+ R + +G  I  + + PG I T  F+ +A
Sbjct: 153 FA--IEGLSLTLRMELQGSGIHVSLIEPGPIETR-FRANA 189

Length = 277

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 59/222 (26%), Positives = 87/222 (39%), Gaps = 63/222 (28%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIG ETA   A   A V+ +  + AAA    +LI      A     ++D+S   ++
Sbjct: 322 GAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI--RAAGAVAHAYRVDVSDADAM 379

Query: 64  KDFAQNFIA-LNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNL-----LL 117
           + FA+   A   +P +I++NNAGI                     G FL T+      +L
Sbjct: 380 EAFAEWVRAEHGVP-DIVVNNAGI------------------GMAGGFLDTSAEDWDRVL 420

Query: 118 DTMN------------RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKK- 164
           D  N            R   E G  G IVN++S                   A Y+  + 
Sbjct: 421 DV-NLWGVIHGCRLFGRQMVERGTGGHIVNVASA------------------AAYAPSRS 461

Query: 165 --AYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN 204
             AY  SK A ++ +  L       G+ +TA  + PG + TN
Sbjct: 462 LPAYATSKAAVLMLSECLRAELAAAGIGVTA--ICPGFVDTN 501

Length = 582

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 54.1 bits (130), Expect = 1e-08
 Identities = 55/210 (26%), Positives = 82/210 (39%), Gaps = 26/210 (12%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G +SGIG  TAR LA   A V IAAR +         +  E +  +   L+LD++  
Sbjct: 7   LVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADEL--EAEGGKALVLELDVTDE 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ--FATNHIGHFLLTNLLLD 118
             +    +  +     L+IL+NNAGIM        D  +      TN +G    T+  L 
Sbjct: 65  QQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTHAALP 124

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
                 K     G IVN+SS+A                R    +   Y  +K      + 
Sbjct: 125 HHLLRNK-----GTIVNISSVA---------------GRVAVRNSAVYNATKFGVNAFSE 164

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
            L +   E GV +    + PG + T L  H
Sbjct: 165 GLRQEVTERGVRVVV--IEPGTVDTELRDH 192

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 61/236 (25%), Positives = 95/236 (40%), Gaps = 45/236 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SG G   A+ L      V+ A         A++L  +   + R+ TL+LD++    I
Sbjct: 7   GCDSGFGNLLAKKLDSLGFTVL-AGCLTKNGPGAKEL--RRVCSDRLRTLQLDVTKPEQI 63

Query: 64  KDFAQNFIALNLP---LNILINNAGIMFCPYQISEDGIEMQFAT-------NHIGHFLLT 113
           K  AQ ++  ++    L  L+NNAGI+        D   +           N  G   +T
Sbjct: 64  KRAAQ-WVKEHVGEKGLWGLVNNAGIL----GFGGDEELLPMDDYRKCMEVNLFGTVEVT 118

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLAN 173
              L  + R AK     GR+VN+SS+       GG        R  +    AY  SK A 
Sbjct: 119 KAFL-PLLRRAK-----GRVVNVSSM-------GG--------RVPFPAGGAYCASKAAV 157

Query: 174 ILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQ 229
              ++ L R  Q  GV ++   + PG   T +  +S +  +  K     LW+ +P 
Sbjct: 158 EAFSDSLRRELQPWGVKVSI--IEPGNFKTGITGNSELWEKQAK----KLWERLPP 207

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 19/139 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG  TA  LA     V   +RN A A               V+ L+LD++  AS+
Sbjct: 11  GASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPG----------VELLELDVTDDASV 60

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIE---MQFATNHIGHFLLTNLLLDTM 120
           +      IA    +++L+NNAG+        E  I      F TN  G   +T  +L  M
Sbjct: 61  QAAVDEVIARAGRIDVLVNNAGVGLAG-AAEESSIAQAQALFDTNVFGILRMTRAVLPHM 119

Query: 121 NRTAKETGIEGRIVNLSSI 139
                     GRI+N+SS+
Sbjct: 120 RAQG-----SGRIINISSV 133

Length = 270

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 46/208 (22%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS- 59
           ++ G ASGIGL  AR    + A V          ++  +  L  +       L+LDLS  
Sbjct: 9   LITGAASGIGLAQARAFLAQGAQVY-------GVDKQDKPDLSGN----FHFLQLDLSDD 57

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIMFCPYQ----ISEDGIEMQFATNHIGHFLLTNL 115
           +  + D+  +        +IL N AGI+   Y+     S +  +  F TN    FLLT  
Sbjct: 58  LEPLFDWVPSV-------DILCNTAGIL-DDYKPLLDTSLEEWQHIFDTNLTSTFLLTRA 109

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
            L  M    +++GI   I+N+ SIA      GG                AY  SK A   
Sbjct: 110 YLPQM--LERKSGI---IINMCSIASFVAGGGGA---------------AYTASKHALAG 149

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMT 203
              +L+  + ++G  I    + PG + T
Sbjct: 150 FTKQLALDYAKDG--IQVFGIAPGAVKT 175

Length = 235

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 7/140 (5%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG +GIG   A+  A   A V IA R       A + I       R   ++ D+    ++
Sbjct: 10  GGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEI-SSATGGRAHPIQCDVRDPEAV 68

Query: 64  KDFAQNFIALNLPLNILINNAGIMF-CPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +      +     ++ILINNA   F  P   +S +G +     +  G F  T  +     
Sbjct: 69  EAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTTKAVG---- 124

Query: 122 RTAKETGIEGRIVNLSSIAH 141
           +   E    G I+N+S+   
Sbjct: 125 KRLIEAKHGGSILNISATYA 144

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 36/207 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG   A  LA   A V++A  N   A    + I+ +  TA    +++D+S   S 
Sbjct: 13  GAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAI--AVQVDVSDPDSA 70

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCPY---QISEDGIEMQFATNHIGHFLLTNLLLD 118
           K  A   ++    ++ L+NNA I           +  D  +   + N  G  + T  +  
Sbjct: 71  KAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYK 130

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            M   AK  G  G IVN SS A  + Y                    YG +K+      N
Sbjct: 131 HM---AKRGG--GAIVNQSSTA-AWLYSN-----------------FYGLAKVG----LN 163

Query: 179 ELSRRFQEE--GVNITANSVHPGLIMT 203
            L+++   E  G+NI  N++ PG I T
Sbjct: 164 GLTQQLARELGGMNIRVNAIAPGPIDT 190

Length = 250

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 34/221 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIG   AR LA     V +  A + AAA+E    I  E    R   ++ D++  A+
Sbjct: 12  GASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEI--EAAGGRAIAVQADVADAAA 69

Query: 63  I-KDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDT 119
           + + F     A    +++L+NNAG+M          +  +   ATN  G F+        
Sbjct: 70  VTRLFDAAETAFG-RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFV-------V 121

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           +   A+  G  GRI+NLS+        G            Y+  KA     L ++L ANE
Sbjct: 122 LREAARHLGQGGRIINLSTSVIALPLPGY---------GPYAASKA-AVEGLVHVL-ANE 170

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLF---KHSAVVMRFLK 217
           L  R       IT N+V PG + T LF   K +  + +   
Sbjct: 171 LRGR------GITVNAVAPGPVATELFFNGKSAEQIDQLAG 205

Length = 245

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 54/210 (25%), Positives = 83/210 (39%), Gaps = 37/210 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ G+GL+ A  L    A V+++AR      EA   +      A    +  D++  A I
Sbjct: 19  GGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALW--IAADVADEADI 76

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFAT-------NHIGHFLLTNLL 116
           +  A+  +     ++IL+NNAG  +          +            N  G FLL+   
Sbjct: 77  ERLAEETLERFGHVDILVNNAGATW-----GAPAEDHPVEAWDKVMNLNVRGLFLLS--- 128

Query: 117 LDTMNRTAKETGIE---GRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLAN 173
                  AK + I    GRI+N++S+A       G+     N      D  AY  SK A 
Sbjct: 129 ----QAVAKRSMIPRGYGRIINVASVA-------GL---GGNPP-EVMDTIAYNTSKGAV 173

Query: 174 ILHANELSRRFQEEGVNITANSVHPGLIMT 203
           I     L+  +   G  I  N++ PG   T
Sbjct: 174 INFTRALAAEWGPHG--IRVNAIAPGFFPT 201

Length = 259

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 48/212 (22%), Positives = 79/212 (37%), Gaps = 24/212 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG  TA   A R A V++AAR+  A +E  + +   +       +  D++  A +
Sbjct: 7   GASSGIGRATALAFAERGAKVVLAARSAEALHELAREV--RELGGEAIAVVADVADAAQV 64

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ--FATNHIGHFLLTNLLLDTMN 121
           +  A   +     ++  +NNAG+            E +  F  N++GH   T   L  + 
Sbjct: 65  ERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHLR 124

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           R        G ++N+ S+                       + AY  SK A       L 
Sbjct: 125 RRG-----GGALINVGSLL---------------GYRSAPLQAAYSASKHAVRGFTESLR 164

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSAVVM 213
                +G  I+   V P  + T  F H+   M
Sbjct: 165 AELAHDGAPISVTLVQPTAMNTPFFGHARSYM 196

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 5e-08
 Identities = 54/209 (25%), Positives = 76/209 (36%), Gaps = 29/209 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIG  TA++ A   A V++A R+  AA      I      A     + D+ S  ++
Sbjct: 12  GAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAI-AAGGRAFA--RQGDVGSAEAV 68

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +       A    L++L+NNAG   C        E   +     N  G FL     +  M
Sbjct: 69  EALVDFVAARWGRLDVLVNNAG-FGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIM 127

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            R        G IVN +S         G R            + AY  SK A       +
Sbjct: 128 QRQGG-----GSIVNTAS----QLALAGGR-----------GRAAYVASKGAIASLTRAM 167

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHS 209
           +     +G  I  N+V PG I T  F+  
Sbjct: 168 ALDHATDG--IRVNAVAPGTIDTPYFRRI 194

Length = 252

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 30/210 (14%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS- 59
           ++ G + GIGL  AR      A V+I AR+  A  +AR  + +E     V  L  D+S  
Sbjct: 13  LITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDD 72

Query: 60  --IASIKDFAQNFIALNLPLNILINNAGIMFCPYQI--SEDGIEMQFATNHIGHFLLTNL 115
               +I D+ ++       L+IL+NNAG       I  +ED     F TN    F L+  
Sbjct: 73  EDRRAILDWVEDHWD---GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRY 129

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
               + + A        IVN+ S++       G+     + R+G      YG +K A + 
Sbjct: 130 AHPLLKQHAS-----SAIVNIGSVS-------GL----THVRSG----APYGMTKAALLQ 169

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTNL 205
               L+  + E+G  I  N+V P  I T L
Sbjct: 170 MTRNLAVEWAEDG--IRVNAVAPWYIRTPL 197

Length = 257

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 26/82 (31%), Positives = 40/82 (48%)

Query: 4  GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
          GG+SGIGL T  +L    A V I  R+      A   + ++   AR+   + D+   A +
Sbjct: 15 GGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADV 74

Query: 64 KDFAQNFIALNLPLNILINNAG 85
            FA    A    +++L+NNAG
Sbjct: 75 AAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 45/142 (31%), Positives = 61/142 (42%), Gaps = 21/142 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTAR---VDTLKLDLSSI 60
           G  SG G E A  LA RK H +IA   +A    A    L+ +   R   +   KLDL+  
Sbjct: 9   GAGSGFGREVALRLA-RKGHNVIAGVQIAPQVTA----LRAEAARRGLALRVEKLDLTDA 63

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLD 118
               D AQ   A    +++L+NNAGI        I  + +   F TN  G   LT   + 
Sbjct: 64  I---DRAQ---AAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVR 117

Query: 119 TMNRTAKETGIEGRIVNLSSIA 140
            M    K     G++V  SS+A
Sbjct: 118 KMVARGK-----GKVVFTSSMA 134

Length = 257

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 28/208 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIGL  AR LA   A++++     AA  EA +  L      +V     DLS  A+I
Sbjct: 9   GSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLSKPAAI 68

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +D           ++IL+NNAGI           +  +   A N    F  T L L  M 
Sbjct: 69  EDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRLALPHM- 127

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK--LANILHANE 179
              K+ G  GRI+N++S               ++     ++K AY  +K  +  +     
Sbjct: 128 ---KKQGW-GRIINIAS---------------VHGLVASANKSAYVAAKHGVVGLTKVVA 168

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFK 207
           L    +  G  +T N++ PG ++T L +
Sbjct: 169 L----ETAGTGVTCNAICPGWVLTPLVE 192

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 4  GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
          G + GIG   A   A    H+ + AR+ A A EA    L+      V    LDLSS  + 
Sbjct: 14 GASKGIGAAAAEAFAAEGCHLHLVARD-ADALEALAADLRAAHGVDVAVHALDLSSPEAR 72

Query: 64 KDFAQNFIALNLPLNILINNAG 85
          +  A    A    ++IL+NNAG
Sbjct: 73 EQLA----AEAGDIDILVNNAG 90

Length = 259

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 35/201 (17%)

Query: 2   LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           + G A GIG   AR L    A VI       A +    L+L+  D  R     LD++  A
Sbjct: 3   VTGAAQGIGRAVARHLLQAGATVI-------ALDLPFVLLLEYGDPLR--LTPLDVADAA 53

Query: 62  SIKDFAQNFIALNLPLNILINNAGI--MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
           ++++     +A + P++ L+N AG+        +S +  E  FA N  G F   NLL   
Sbjct: 54  AVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVF---NLLQAV 110

Query: 120 MNRTAKETGIEGRIVNLSS-IAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
                      G IV ++S  AH               R   +   AYG SK A  L + 
Sbjct: 111 APHMKDRRT--GAIVTVASNAAHV-------------PRISMA---AYGASKAA--LASL 150

Query: 179 ELSRRFQEEGVNITANSVHPG 199
                 +     +  N V PG
Sbjct: 151 SKCLGLELAPYGVRCNVVSPG 171

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 44/216 (20%), Positives = 75/216 (34%), Gaps = 42/216 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G ++G+G  TAR  A R A V++ AR           I           +  D++   ++
Sbjct: 15  GASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEI--RAAGGEALAVVADVADAEAV 72

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +  A        P++  +NNA + +F P+  ++ +         ++G    T   L  M 
Sbjct: 73  QAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMR 132

Query: 122 RTAKETGIEGRIVNLSS------IAHQYTY---KGGIRFQKINDRAGYSDKKAYGQSKLA 172
                    G I+ + S      I  Q  Y   K  IR        G++D      S   
Sbjct: 133 PRD-----RGAIIQVGSALAYRSIPLQSAYCAAKHAIR--------GFTD------SLRC 173

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
            +LH          +G  ++   V P  + T  F  
Sbjct: 174 ELLH----------DGSPVSVTMVQPPAVNTPQFDW 199

Length = 334

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           +L G +SGIG   A   A R A V+  AR     +     I +    A    +  DLS +
Sbjct: 44  LLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMA--VPCDLSDL 101

Query: 61  ASIKDFAQNFIALNLPLNILINNAG 85
            ++     +       ++ILINNAG
Sbjct: 102 DAVDALVADVEKRIGGVDILINNAG 126

Length = 293

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 57/223 (25%), Positives = 87/223 (39%), Gaps = 39/223 (17%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANE-ARQLILKEDDTARVDTLKLDLSS 59
           ++  GA GIG   AR +   K  V++A  N       A+ L    +    V T ++D+SS
Sbjct: 5   VVVIGAGGIGQAIARRVGAGK-KVLLADYNEENLEAAAKTL---REAGFDVSTQEVDVSS 60

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
             S+K  A     L  P+  L++ AG+   P Q S    E     +  G    T L+L+ 
Sbjct: 61  RESVKALAATAQTLG-PVTGLVHTAGV--SPSQAS---PEAILKVDLYG----TALVLEE 110

Query: 120 MNRTAKETGIEGRIVNLSS-------------IAHQYTYK----GGIRFQKINDRAGYSD 162
             +     G    I + S              +A   T +      ++   I D      
Sbjct: 111 FGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLH--- 167

Query: 163 KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL 205
             AY  +K AN L     + ++ E G  I  NS+ PG+I T L
Sbjct: 168 --AYQIAKRANALRVMAEAVKWGERGARI--NSISPGIISTPL 206

Length = 275

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 12/150 (8%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G + GIG  TAR+L      V I AR+ A    A    L+      V  L  D+   
Sbjct: 4   LVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELE-----GVLGLAGDVRDE 58

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI-MFCP-YQISEDGIEMQFATNHIGHFLLTNLLLD 118
           A ++            L+ L+NNAG+ +  P  +++ +   +   TN  G F        
Sbjct: 59  ADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCI---HK 115

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGG 148
                 +  G  G IVN+ S+A +  +KGG
Sbjct: 116 AAPALLRRGG--GTIVNVGSLAGKNAFKGG 143

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 49/219 (22%), Positives = 82/219 (37%), Gaps = 37/219 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG   AR  A    +V +AAR     +E +  +L  + +  V+   LD++     
Sbjct: 5   GASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEI--LDVTDEERN 62

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM------QFATNHIGHFLLTNLLL 117
           +       A    L+++I NAG+     + +  G            TN +G   +    L
Sbjct: 63  QLVIAELEAELGGLDLVIINAGV----GKGTSLGDLSFKAFRETIDTNLLGAAAILEAAL 118

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
                  +     G +V +SS+A        +R        G     AY  SK A    A
Sbjct: 119 PQFRAKGR-----GHLVLISSVA-------ALR--------GLPGAAAYSASKAALSSLA 158

Query: 178 NELSRRFQEEGVNITANSVHPGLI---MTNLFKHSAVVM 213
             L    ++ G+ +T   ++PG I   +T        +M
Sbjct: 159 ESLRYDVKKRGIRVT--VINPGFIDTPLTANMFTMPFLM 195

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 49.3 bits (118), Expect = 6e-07
 Identities = 51/215 (23%), Positives = 77/215 (35%), Gaps = 50/215 (23%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARN-----MAAANEARQLILKEDDTARVDTLKLDLS 58
              SGIG   A +LA +   + I   +        A E R          R +  +LDLS
Sbjct: 9   ASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH------GVRAEIRQLDLS 62

Query: 59  SIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFAT-------NHIGHFL 111
            +          I     +++L+NNAG M          ++M F         +  G FL
Sbjct: 63  DLPEGAQALDKLIQRLGRIDVLVNNAGAMT-----KAPFLDMDFDEWRKIFTVDVDGAFL 117

Query: 112 LTNLLLDTMNRTAK---ETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQ 168
                       A+   + G  GRI+N++S+ H++T   G         + Y+  K    
Sbjct: 118 C-------SQIAARHMVKQGQGGRIINITSV-HEHTPLPG--------ASAYTAAKH-AL 160

Query: 169 SKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
             L   + A EL          I  N+V PG I T
Sbjct: 161 GGLTKAM-ALELVEH------GILVNAVAPGAIAT 188

Length = 256

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.8 bits (120), Expect = 6e-07
 Identities = 62/217 (28%), Positives = 85/217 (39%), Gaps = 56/217 (25%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARV------DTLKLDL 57
           G A GIG   A VLA   AHV+    ++ AA          +  A V        L LD+
Sbjct: 217 GAARGIGAAIAEVLARDGAHVV--CLDVPAA---------GEALAAVANRVGGTALALDI 265

Query: 58  SSIASIKDFAQNFIALNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGH 109
           ++  +    A++    +  L+I+++NAGI        M       E   +   A N +  
Sbjct: 266 TAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANM------DEARWDSVLAVNLLAP 319

Query: 110 FLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQS 169
             +T  LL      A   G  GRIV +SSI+       GI        AG   +  Y  S
Sbjct: 320 LRITEALLA-----AGALGDGGRIVGVSSIS-------GI--------AGNRGQTNYAAS 359

Query: 170 KLANILHANELSRRFQEEGVNITANSVHPGLI---MT 203
           K   I     L+    E G  IT N+V PG I   MT
Sbjct: 360 KAGVIGLVQALAPLLAERG--ITINAVAPGFIETQMT 394

Length = 450

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 49.4 bits (118), Expect = 6e-07
 Identities = 55/213 (25%), Positives = 83/213 (38%), Gaps = 33/213 (15%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GG  GIG      LA   A V   ARN    +E      ++    +V+    D+SS 
Sbjct: 10  LVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKG--FKVEGSVCDVSSR 67

Query: 61  ASIKDFAQNFIA--LNLPLNILINNAGIMFCPYQI--SEDGIEMQFATNHIGHFLLTNLL 116
            S +    + +A      LNIL+NNAG          +E+   +  +TN    + L+ L 
Sbjct: 68  -SERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLSRLA 126

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              +  +       G IV +SS+A       G                 YG +K A    
Sbjct: 127 HPLLKASGN-----GNIVFISSVAGVIAVPSG---------------APYGATKGA---- 162

Query: 177 ANELSRRFQEEGV--NITANSVHPGLIMTNLFK 207
            N+L+R    E    NI  N+V P +I T L +
Sbjct: 163 LNQLTRSLACEWAKDNIRVNAVAPWVIATPLVE 195

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 49.0 bits (117), Expect = 7e-07
 Identities = 64/213 (30%), Positives = 91/213 (42%), Gaps = 39/213 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA---RVDTLKLDLSSI 60
           GG  GIG  TA    L K    +AA      NE R     ++  A       ++ D+SS 
Sbjct: 7   GGMGGIG--TAICQRLAKDGYRVAAN--CGPNEERAEAWLQEQGALGFDFRVVEGDVSSF 62

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI----MF--CPYQISEDGIEMQFATNHIGHFLLTN 114
            S K       A   P+++L+NNAGI     F    Y+     I     TN    F +T 
Sbjct: 63  ESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVI----DTNLNSVFNVTQ 118

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
            ++D M    +E G  GRI+N+SS+  Q   KG  +F + N    YS  KA G       
Sbjct: 119 PVIDGM----RERGW-GRIINISSVNGQ---KG--QFGQTN----YSAAKA-GMIGFTKA 163

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
           L A E + +       +T N++ PG I T++  
Sbjct: 164 L-AQEGATK------GVTVNTISPGYIATDMVM 189

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 48.7 bits (116), Expect = 8e-07
 Identities = 54/213 (25%), Positives = 82/213 (38%), Gaps = 33/213 (15%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGA+GIG   A  LA   A V+IA      A      I +    A    L+ +++S 
Sbjct: 3   IVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAI--GLECNVTSE 60

Query: 61  ASIKDFAQNFIALNLPLNILINNAG----IMFCPYQISEDGIEMQFATNHIGHFLLTNLL 116
             ++   +  ++    + IL+NNAG      F      ED  E  F  N    F L+ L 
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEED-FEWAFKLNLFSAFRLSQLC 119

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              M +        G I+N+SS++ +                      AYG SK A    
Sbjct: 120 APHMQKAGG-----GAILNISSMSSENK---------------NVRIAAYGSSKAA---- 155

Query: 177 ANELSRR--FQEEGVNITANSVHPGLIMTNLFK 207
            N ++R   F      I  N+V PG + T+   
Sbjct: 156 VNHMTRNLAFDLGPKGIRVNAVAPGAVKTDALA 188

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 8e-07
 Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 26/213 (12%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G   GIG   ARV A   A++I+   +      A +L  +      V     D+   
Sbjct: 10  LITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAV---VADVRDP 66

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLD 118
           AS+    +        ++IL+NNAG+     +  +S++  +     N  G + +T  +L 
Sbjct: 67  ASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLP 126

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            M         +GRIV +SS+                D      + AY  +K A +    
Sbjct: 127 EM----IARK-DGRIVMMSSVT--------------GDMVADPGETAYALTKAAIVGLTK 167

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV 211
            L+  + +    I  N++ PG + T + +  A 
Sbjct: 168 SLAVEYAQS--GIRVNAICPGYVRTPMAESIAR 198

Length = 263

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 43/207 (20%), Positives = 75/207 (36%), Gaps = 38/207 (18%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++   A GIG   A   A   A+VI    N     E        +    + T  LD++  
Sbjct: 6   LITAAAQGIGRAIALAFAREGANVIATDINEEKLKEL-------ERGPGITTRVLDVTDK 58

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPY----QISEDGIEMQFATNHIGHFLLTNLL 116
             +   A+        +++L N AG  F  +       +D  +     N    +L+   +
Sbjct: 59  EQVAALAKEEGR----IDVLFNCAG--FVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAV 112

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           L  M          G I+N+SS+A              +   G  ++  Y  +K A I  
Sbjct: 113 LPKM---LARKD--GSIINMSSVA--------------SSIKGVPNRFVYSTTKAAVIGL 153

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMT 203
              ++  F ++G  I  N++ PG + T
Sbjct: 154 TKSVAADFAQQG--IRCNAICPGTVDT 178

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 1  MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
          ++ G + GIG   A  LA   A VI+  R+ A    A + +  +        L  D++  
Sbjct: 14 LVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL--KGQGLSAHALAFDVTDH 71

Query: 61 ASIKDFAQNFIALNLPLNILINNAGIMF 88
           +++     F A   P++IL+NNAG+ F
Sbjct: 72 DAVRAAIDAFEAEIGPIDILVNNAGMQF 99

Length = 255

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 48.4 bits (115), Expect = 1e-06
 Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 39/214 (18%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G ASGIG E A  LA   A V IA  N   AN     I       +   + +D+++ 
Sbjct: 11  VVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEI--NKAGGKAIGVAMDVTNE 68

Query: 61  ----ASIKDFAQNFIALNLPLNILINNAGIMFC-PYQ--ISEDGIEMQFATNHIGHFLLT 113
               A I   A+ F +    ++IL++NAGI    P +     D  +MQ A +  G FL T
Sbjct: 69  DAVNAGIDKVAERFGS----VDILVSNAGIQIVNPIENYSFADWKKMQ-AIHVDGAFLTT 123

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLAN 173
              L  M +  +     G ++ + S               ++       K AY  +K   
Sbjct: 124 KAALKHMYKDDR----GGVVIYMGS---------------VHSHEASPLKSAYVTAKHGL 164

Query: 174 ILHANELSRRFQEEGV--NITANSVHPGLIMTNL 205
           +     L+R   +EG   N+ ++ V PG + T L
Sbjct: 165 L----GLARVLAKEGAKHNVRSHVVCPGFVRTPL 194

Length = 262

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 18/139 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG   A       A VI   +      +               T  LD+S  A++
Sbjct: 15  GAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYP-----------FATFVLDVSDAAAV 63

Query: 64  KDFAQNFIALNLPLNILINNAGI--MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
               Q  +A   PL++L+N AGI  M     +S++  +  FA N  G F L   ++    
Sbjct: 64  AQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFR 123

Query: 122 RTAKETGIEGRIVNLSSIA 140
           R        G IV + S A
Sbjct: 124 RQR-----SGAIVTVGSNA 137

Length = 252

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 27/148 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAA----ANEARQLILKEDDTARVDTLKLDLSS 59
           G +SGIG  TA   A     + + AR+  A    A E R          +     +DLS+
Sbjct: 13  GASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST------GVKAAAYSIDLSN 66

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFA-------TNHIGHFLL 112
             +I       +      ++LINNAG+ +     +   +EM  +        N    F  
Sbjct: 67  PEAIAPGIAELLEQFGCPDVLINNAGMAY-----TGPLLEMPLSDWQWVIQLNLTSVFQC 121

Query: 113 TNLLLDTMNRTAKETGIEGRIVNLSSIA 140
            + +L  M          G I+N+SSIA
Sbjct: 122 CSAVLPGMRARGG-----GLIINVSSIA 144

Length = 241

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 50/157 (31%), Positives = 68/157 (43%), Gaps = 29/157 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIA----ARNMAAANEARQLILKEDDTARVDTLKLDLSS 59
           GGASGIG  TAR+ A   A V+IA        A A E     L + D + V     D++ 
Sbjct: 11  GGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAE-----LGDPDISFVHC---DVTV 62

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIMFCP-YQISE---DGIEMQFATNHIGHFLLTNL 115
            A ++      +A    L+I+ NNAG++  P Y I E   +  E     N  G FL T  
Sbjct: 63  EADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGTKH 122

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIA--------HQYT 144
               M    K     G IV+++S+A        H YT
Sbjct: 123 AARVMIPAKK-----GSIVSVASVAGVVGGLGPHAYT 154

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 32/203 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA GIG   A   A     ++I  R+   A +  + +  E  + +      D++  A++
Sbjct: 276 GGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQA-----DITDEAAV 330

Query: 64  KDFAQNFIALNLPLNILINNAGI--MFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +       A    L++L+NNAGI  +F P  + S +     +  N  G F         M
Sbjct: 331 ESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM 390

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
           ++        G IVNL S               I        + AY  SK A  + +  L
Sbjct: 391 SQG-------GVIVNLGS---------------IASLLALPPRNAYCASKAAVTMLSRSL 428

Query: 181 SRRFQEEGVNITANSVHPGLIMT 203
           +  +   G  I  N+V PG I T
Sbjct: 429 ACEWAPAG--IRVNTVAPGYIET 449

Length = 520

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 49/205 (23%), Positives = 70/205 (34%), Gaps = 34/205 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G A  IG   A  LA     V++      A A   +  +    ++A    ++ DLS  A+
Sbjct: 7   GAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAV--LVQADLSDFAA 64

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
             D            ++L+NNA   +     Q SED     F  N    +LL        
Sbjct: 65  CADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLI---QAFA 121

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK--LANILHAN 178
            R A      G I+N+       T +              +   AY  SK  L       
Sbjct: 122 RRLAGSRN--GSIINIIDA---MTDR------------PLTGYFAYCMSKAALEG----- 159

Query: 179 ELSRRF-QEEGVNITANSVHPGLIM 202
            L+R    E   NI  N + PGLI+
Sbjct: 160 -LTRSAALELAPNIRVNGIAPGLIL 183

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 28/210 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG   A  LA R  +VI+ +R     +   + I +E       T+  D S+   I
Sbjct: 8   GATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEI-EEKYGVETKTIAADFSAGDDI 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
            +  +  +   L + IL+NN GI         +  ED ++     N +    +T L+L  
Sbjct: 67  YERIEKELE-GLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRLILPG 125

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           M +  K     G IVN+SS A                 A YS  KA+     +  L+  E
Sbjct: 126 MVKRKK-----GAIVNISSFAGLIPTPLL---------ATYSASKAFLDF-FSRALYE-E 169

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKHS 209
                  +G+++   S+ P L+ T + K  
Sbjct: 170 YKS----QGIDV--QSLLPYLVATKMSKIR 193

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 49/205 (23%), Positives = 79/205 (38%), Gaps = 25/205 (12%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGA GIG   A  LA     V +A  N   A E  + I  +     V   KLD+S  
Sbjct: 4   LVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEI-NQAGGKAV-AYKLDVSDK 61

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLD 118
             +              ++++NNAG+       +I+E+ ++  +  N  G        + 
Sbjct: 62  DQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVL----FGIQ 117

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
              R  K+ G  G+I+N +SIA                  G     AY  +K A      
Sbjct: 118 AAARQFKKQGHGGKIINAASIAGH---------------EGNPILSAYSSTKFAVRGLTQ 162

Query: 179 ELSRRFQEEGVNITANSVHPGLIMT 203
             ++    +G  IT N+  PG++ T
Sbjct: 163 TAAQELAPKG--ITVNAYCPGIVKT 185

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 18/154 (11%)

Query: 1   MLAGGASGIGLETARVLALR-KAH---VIIAARNMAAANEARQLILKEDDTARVDTLKLD 56
           ++ G + G G   A+ LA   K+    ++++ARN  A  + +  I  E    RV  + LD
Sbjct: 4   LVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLD 63

Query: 57  LSSIASIKDFAQNFIALNLPLN----ILINNAGIMFCPYQISED-----GIEMQFATNHI 107
           L + A ++   +    L  P      +LINNAG +    +   D      ++  +A N  
Sbjct: 64  LGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLT 123

Query: 108 GHFLLTNLLLDTMNRTAKET-GIEGRIVNLSSIA 140
               LT+ +L    +  K++ G+   +VN+SS+ 
Sbjct: 124 SMLCLTSSVL----KAFKDSPGLNRTVVNISSLC 153

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 47.0 bits (112), Expect = 5e-06
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 1   MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS 59
           ++ GG  G+GL  AR LA R A H+++ +R   A   A +  L     ARV  ++ D++ 
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 60  IASIKDFAQNFIALNLPLNILINNAGI 86
            A++       +A   PL  +I+ AG+
Sbjct: 214 PAALAALLAE-LAAGGPLAGVIHAAGV 239

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 46.5 bits (110), Expect = 5e-06
 Identities = 59/209 (28%), Positives = 85/209 (40%), Gaps = 28/209 (13%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GG  GIG  T R  A   A V +   N  AA +    I  +   A+      D++  
Sbjct: 7   IVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQ--AFACDITDR 64

Query: 61  ASIKDFAQNFIALNL-PLNILINNAGI-MFCPYQISEDGI-EMQFATNHIGHFLLTNLLL 117
            S+ D A       L P+++L+NNAG   F P+  +E  + E   A N  G   + + +L
Sbjct: 65  DSV-DTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVL 123

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
             M     E G  GRIVN++S A                R G S +  Y   K   +  +
Sbjct: 124 PGM----VERG-AGRIVNIASDA---------------ARVGSSGEAVYAACKGGLVAFS 163

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLF 206
             ++R     G  IT N V PG   T L 
Sbjct: 164 KTMAREHARHG--ITVNVVCPGPTDTALL 190

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 49/208 (23%), Positives = 73/208 (35%), Gaps = 29/208 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIGL  AR LA     + I  R       A            V     D++ +++ 
Sbjct: 9   GGRRGIGLGIARALAAAGFDLAINDRP-DDEELAATQQELRALGVEVIFFPADVADLSAH 67

Query: 64  KDFAQNFIALNLPLNILINNAGI-------MFCPYQISEDGIEMQFATNHIGHFLLTNLL 116
           +       A    ++ L+NNAG+       +     ++ +  +   A N  G F LT  +
Sbjct: 68  EAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLL---DLTPESFDRVLAINLRGPFFLTQAV 124

Query: 117 LDTM-NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
              M  +   E      IV +SS+               N      ++  Y  SK    +
Sbjct: 125 AKRMLAQPEPEELPHRSIVFVSSV---------------NAIMVSPNRGEYCISKAGLSM 169

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMT 203
            A   + R  EEG  I    V PGLI T
Sbjct: 170 AAQLFAARLAEEG--IGVYEVRPGLIKT 195

Length = 256

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 45.6 bits (109), Expect = 6e-06
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 2/87 (2%)

Query: 2  LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILK-EDDTARVDTLKLDLSS 59
          + GG  G+GLE AR LA R A H+++ +R+ A   EA  L+ + E   A V  +  D+S 
Sbjct: 5  VTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVSD 64

Query: 60 IASIKDFAQNFIALNLPLNILINNAGI 86
            +++       A   PL  +I+ AG+
Sbjct: 65 RDAVRALLAEIRADGPPLRGVIHAAGV 91

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 46.2 bits (109), Expect = 7e-06
 Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 35/214 (16%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSS 59
           ++ G + GIG   A  LA   A V I   RN  AA+E  + I  E +  +   ++ DL+S
Sbjct: 10  LVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREI--ESNGGKAFLIEADLNS 67

Query: 60  IASIKDFAQ---NFIALNL---PLNILINNAGI--MFCPYQISEDGIEMQFATNHIGHFL 111
           I  +K   +   N + + +    ++IL+NNAGI         +E+  +   A N    F 
Sbjct: 68  IDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFF 127

Query: 112 LTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKL 171
           L    L  +         EGR++N+SS                  R G++   AYG SK 
Sbjct: 128 LIQQTLPLLR-------AEGRVINISS---------------AEVRLGFTGSIAYGLSKG 165

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMTNL 205
           A       L++   E G  IT N++ PG   T++
Sbjct: 166 ALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 45.9 bits (109), Expect = 8e-06
 Identities = 53/219 (24%), Positives = 80/219 (36%), Gaps = 42/219 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAA-NEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG   +G   AR LA   A V    RN       A+++        R   L  D+   AS
Sbjct: 12  GGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEI---TALGGRAIALAADVLDRAS 68

Query: 63  IKDFAQNFIALNLPLNILINNAG----------------IMFCPYQISEDGIEMQFATNH 106
           ++   +  +A    ++ILIN AG                     + + E+G E  F  N 
Sbjct: 69  LERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEFVFDLNL 128

Query: 107 IGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAY 166
            G FL + +    M    ++ G  G I+N+SS+           F  +     YS  KA 
Sbjct: 129 NGSFLPSQVFGKDM---LEQKG--GSIINISSMN---------AFSPLTKVPAYSAAKA- 173

Query: 167 GQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL 205
                A       L+  F   GV +  N++ PG  +T  
Sbjct: 174 -----AVSNFTQWLAVEFATTGVRV--NAIAPGFFVTPQ 205

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 45.7 bits (109), Expect = 8e-06
 Identities = 57/218 (26%), Positives = 84/218 (38%), Gaps = 32/218 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANE-ARQLILKEDDTARVDTLKLDLSSIAS 62
           G +SGIG   AR  A + A + + AR   A    A +L       ARV     D+    +
Sbjct: 9   GASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK----AARVSVYAADVRDADA 64

Query: 63  IKDFAQNFIA-LNLPLNILINNAGI---MFCPYQISEDGIEMQFATNHIGHFLLTNLLLD 118
           +   A +FIA   LP +++I NAGI        +           TN+ G        + 
Sbjct: 65  LAAAAADFIAAHGLP-DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIA 123

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            M          G +V ++S+A       G+R        G     AY  SK A I +  
Sbjct: 124 PMRAAR-----RGTLVGIASVA-------GVR--------GLPGAGAYSASKAAAIKYLE 163

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFL 216
            L    +  GV +   ++ PG I T +  H+   M FL
Sbjct: 164 SLRVELRPAGVRVV--TIAPGYIRTPMTAHNPYPMPFL 199

Length = 257

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 45.8 bits (108), Expect = 8e-06
 Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 29/209 (13%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE--DDTARVDTLKLDLS 58
           ++ GGA GIG      LA   A V+I   N  ++ EA + ++ E   +   V  ++ D+S
Sbjct: 10  IVTGGAKGIGKAITVALAQEGAKVVI---NYNSSKEAAENLVNELGKEGHDVYAVQADVS 66

Query: 59  SIASIKDFAQNFIALNLPLNILINNAGIM--FCPYQISEDGIEMQFATNHIGHFLLTNLL 116
            +       +  +     ++IL+NNAGI       +++ +  E     N    F  T+ +
Sbjct: 67  KVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAV 126

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           L  +         EGRI+++SSI  Q    GG  F + N    YS  KA G       L 
Sbjct: 127 LPYITEAE-----EGRIISISSIIGQ---AGG--FGQTN----YSAAKA-GMLGFTKSL- 170

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNL 205
           A EL++       N+T N++ PG I T +
Sbjct: 171 ALELAK------TNVTVNAICPGFIDTEM 193

Length = 247

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.7 bits (109), Expect = 9e-06
 Identities = 55/220 (25%), Positives = 82/220 (37%), Gaps = 53/220 (24%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA G+G   A  LA + A + +   N     EA           R      +++    +
Sbjct: 12  GGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVR--GYAANVTDEEDV 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFL------------ 111
           +            LN LINNAGI+        DG+ ++     +   +            
Sbjct: 70  EATFAQIAEDFGQLNGLINNAGIL-------RDGLLVKAKDGKVTSKMSLEQFQSVIDVN 122

Query: 112 LTNLLLDTMNRTAK--ETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG------YSDK 163
           LT + L      AK  E+G +G I+N+SSIA                RAG      YS  
Sbjct: 123 LTGVFLCGREAAAKMIESGSKGVIINISSIA----------------RAGNMGQTNYSAS 166

Query: 164 KAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           KA G + +  +  A EL+R        I   ++ PG+I T
Sbjct: 167 KA-GVAAMT-VTWAKELAR------YGIRVAAIAPGVIET 198

Length = 253

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 31/212 (14%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GGA+GIG  TA   A   A V++A R+ A   E   LI +    A    +  D++  
Sbjct: 11  LVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALF--VACDVTRD 68

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQI---SEDGIEMQFATNHIGHFLLTNLLL 117
           A +K   +  IA    L+   NNAGI     ++   SE   +     N  G +L     +
Sbjct: 69  AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQI 128

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKK--AYGQSKLANIL 175
             M     + G  G IVN +S+A      G     K+   + Y+  K    G +K A I 
Sbjct: 129 PLM---LAQGG--GAIVNTASVA------GLGAAPKM---SIYAASKHAVIGLTKSAAIE 174

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
           +A +           I  N+V P +I T++F+
Sbjct: 175 YAKK----------GIRVNAVCPAVIDTDMFR 196

Length = 253

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 40/214 (18%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G A GIG    +  A     V++A RN+  A E     L  D  A    L +D+S  
Sbjct: 9   LVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADS-LGPDHHA----LAMDVSDE 63

Query: 61  ASI----KDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLL 112
           A I    +   + F  +++    L+NNAG+    M      + +      A N  G +L+
Sbjct: 64  AQIREGFEQLHREFGRIDV----LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLV 119

Query: 113 TNLLLDTMNRTAKETGIEGR-IVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKL 171
               L  M          G  IVN++S A       G+             + AY  SK 
Sbjct: 120 AREALRLM-----IEQGHGAAIVNVASGA-------GLV--------ALPKRTAYSASKA 159

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMTNL 205
           A I     L+  +  +G+ + A  V PG + T +
Sbjct: 160 AVISLTRSLACEWAAKGIRVNA--VLPGYVRTQM 191

Length = 520

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 56/221 (25%), Positives = 86/221 (38%), Gaps = 37/221 (16%)

Query: 3   AGGASGIGLETARVLALRKAHVII----AARNMAAANEARQLILKEDDTARVDTLKLDLS 58
            GG+ GIGL  AR LA   A V I    A R    A E     L +    +    K D+S
Sbjct: 14  TGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEE-----LAKKYGVKTKAYKCDVS 68

Query: 59  SIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLL-- 116
           S  S++   +        ++ILI NAGI    ++ + D    Q+        +  NL   
Sbjct: 69  SQESVEKTFKQIQKDFGKIDILIANAGI--TVHKPALDYTYEQWN-----KVIDVNLNGV 121

Query: 117 ---LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLAN 173
                   +  K+ G +G ++  +S++             +N     +   AY  SK A 
Sbjct: 122 FNCAQAAAKIFKKQG-KGSLIITASMSGTI----------VNRPQPQA---AYNASKAAV 167

Query: 174 ILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR 214
           I  A  L+  + +    I  NS+ PG I T+L       +R
Sbjct: 168 IHLAKSLAVEWAKYF--IRVNSISPGYIDTDLTDFVDKELR 206

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 53/209 (25%), Positives = 82/209 (39%), Gaps = 30/209 (14%)

Query: 5   GAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GAS G G         R   V+  AR+ A   +     L E    R+  L LD++  A++
Sbjct: 10  GASRGFGRAWTEAALERGDRVVATARDTATLAD-----LAEKYGDRLLPLALDVTDRAAV 64

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
               +  +     L+I++NNAG   F    +++E     Q  TN  G   +T  +L  + 
Sbjct: 65  FAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLR 124

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                    G I+ +SSI       GGI        + +     Y  SK A    +  L+
Sbjct: 125 EQRS-----GHIIQISSI-------GGI--------SAFPMSGIYHASKWALEGMSEALA 164

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSA 210
           +   E G+ +T   V PG   T+    SA
Sbjct: 165 QEVAEFGIKVTL--VEPGGYSTDWAGTSA 191

Length = 275

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 36/207 (17%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  +G G    R   +++ H +IA        + R   LK++    +   +LD+ + 
Sbjct: 4   LVTGATAGFGECITRRF-IQQGHKVIAT----GRRQERLQELKDELGDNLYIAQLDVRNR 58

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI---MFCPYQISEDGIEMQFATNHIGHFLLTNLLL 117
           A+I++   +  A    +++L+NNAG+   +   ++ S +  E    TN+ G   +T  +L
Sbjct: 59  AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 118 DTM---NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
             M   N         G I+N+ S A  + Y GG                 YG +K    
Sbjct: 119 PGMVERNH--------GHIINIGSTAGSWPYAGG---------------NVYGATKA--F 153

Query: 175 LHANELSRRFQEEGVNITANSVHPGLI 201
           +    L+ R    G  +    + PGL+
Sbjct: 154 VRQFSLNLRTDLHGTAVRVTDIEPGLV 180

Length = 248

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 37/144 (25%), Positives = 54/144 (37%), Gaps = 18/144 (12%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
            + G ASGIG  TA + A     V     N A        +          T  LD++  
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL----GAGNAWTGALDVTDR 60

Query: 61  ----ASIKDFAQNFIALNLPLNILINNAGI-MFCPYQ-ISEDGIEMQFATNHIGHFLLTN 114
               A++ DFA    A    L++L NNAGI    P++ I  +  +     N  G     +
Sbjct: 61  AAWDAALADFAA---ATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAH 117

Query: 115 LLLDTMNRTAKETGIEGRIVNLSS 138
             L  +  T        R++N SS
Sbjct: 118 AALPYLKATP-----GARVINTSS 136

Length = 260

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 46/219 (21%)

Query: 2   LAGGASGIGLETARVLALRKAHVIIAARNMAA-ANEARQLILKEDDTARVDTLKLDLSS- 59
           + G + GIG   A  LA   A +++AARN    A+ A++L    D       +  D+S  
Sbjct: 6   ITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQEL---ADHGGEALVVPTDVSDA 62

Query: 60  -------IASIKDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGI-EMQFATNHIGH 109
                   A++  F          ++IL+NNAGI       ++++  + E     N++G 
Sbjct: 63  EACERLIEAAVARFGG--------IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGA 114

Query: 110 FLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQS 169
              T+  L  +  +       G+IV +SS+A       G+         G   +  Y  S
Sbjct: 115 VYCTHAALPHLKAS------RGQIVVVSSLA-------GL--------TGVPTRSGYAAS 153

Query: 170 KLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           K A     + L     ++GV +T   V PG + T++ K 
Sbjct: 154 KHALHGFFDSLRIELADDGVAVTV--VCPGFVATDIRKR 190

Length = 263

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 52/208 (25%), Positives = 83/208 (39%), Gaps = 43/208 (20%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G + GIG   AR LA     +++  R     +E    +             +DL+  
Sbjct: 7   LITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAAEL------PGATPFPVDLTDP 59

Query: 61  ASIKD-FAQNFIALNLP-LNILINNAGIMFCPYQISEDGIEM---QFATNHIGHFLLTNL 115
            +I     Q      L  L++L++NAG+      ++E  ++        N +    LT L
Sbjct: 60  EAIAAAVEQ------LGRLDVLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRL 112

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
           LL  + R A      G +V ++S A       G+R        G+    +Y  SK A  L
Sbjct: 113 LLPAL-RAA-----HGHVVFINSGA-------GLR-----ANPGWG---SYAASKFA--L 149

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMT 203
            A   + R +EE  N+   SVHPG   T
Sbjct: 150 RALADALR-EEEPGNVRVTSVHPGRTDT 176

Length = 227

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 29/217 (13%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GG+ GIG    R      A V+  AR  AA       + +    +    +  D++  
Sbjct: 13  IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCK-FVPCDVTKE 71

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFAT----NHIGHFLLTNLL 116
             IK      +     ++ L+NNAG    P+Q +++    +F      N I +FL +   
Sbjct: 72  EDIKTLISVTVERFGRIDCLVNNAG-WHPPHQTTDETSAQEFRDLLNLNLISYFLASKYA 130

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           L  + ++      +G I+NLSS+       G I         G      Y  +K A    
Sbjct: 131 LPHLRKS------QGNIINLSSLV------GSI---------GQKQAAPYVATKGAITAM 169

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM 213
              L+      GV +  N + PG I T L++  A   
Sbjct: 170 TKALAVDESRYGVRV--NCISPGNIWTPLWEELAAQT 204

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 30/207 (14%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++AG +SGIG  TA  LA     V + AR +    E    I  +   A      LD++  
Sbjct: 14  LVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAV--AFPLDVTDP 71

Query: 61  ASIKDFAQNFIALNLPLNILINNAG-IMFCP-YQISEDGIEMQFATNHIGHFLLTNLLLD 118
            S+K F          + +L++ AG   F   ++IS +  E Q   + +G   L   +L 
Sbjct: 72  DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP 131

Query: 119 TMNRTAKETGIEGRIVNLSS--IAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
            M    +     G ++ + S     Q  + G                 AYG +K      
Sbjct: 132 GMIERRR-----GDLIFVGSDVALRQRPHMG-----------------AYGAAKAGLEAM 169

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMT 203
              L  + + EG  + A+ VHPG  +T
Sbjct: 170 VTNL--QMELEGTGVRASIVHPGPTLT 194

Length = 274

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 55/215 (25%), Positives = 83/215 (38%), Gaps = 41/215 (19%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIA--ARNMAAANEARQLILKEDDTARVDTLKLDLS 58
           ++ GG SGIG   A   A   A V I         A E ++LI  E++  +   +  DL 
Sbjct: 30  LITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLI--EEEGRKCLLIPGDLG 87

Query: 59  SIASIKDFAQNFIALNLPLNILINNAGIMFCPYQ--------ISEDGIEMQFATNHIGHF 110
             +  +D  +  +     L+IL+NNA      YQ        I+ + +E  F TN    F
Sbjct: 88  DESFCRDLVKEVVKEFGKLDILVNNAA-----YQHPQESIEDITTEQLEKTFRTNIFSMF 142

Query: 111 LLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK 170
            LT   L  + + +        I+N +S+                   G      Y  +K
Sbjct: 143 YLTKAALPHLKKGS-------SIINTTSV---------------TAYKGSPHLLDYAATK 180

Query: 171 LANILHANELSRRFQEEGVNITANSVHPGLIMTNL 205
            A +     LS +  E+G  I  N+V PG I T L
Sbjct: 181 GAIVAFTRGLSLQLAEKG--IRVNAVAPGPIWTPL 213

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 55/238 (23%), Positives = 92/238 (38%), Gaps = 37/238 (15%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G + GIG   AR L      V+  AR +           +      +   + DLS+ 
Sbjct: 10  LVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAE-CQSAGYPTLFPYQCDLSNE 68

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISE---DGIEMQFATNHIGHFLLTNLLL 117
             I          +  +++ INNAG+   P  +     +G +  F  N +   + T    
Sbjct: 69  EQILSMFSAIRTQHQGVDVCINNAGLAR-PEPLLSGKTEGWKEMFDVNVLALSICTREAY 127

Query: 118 DTMNRTAKETGI-EGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
            +M    KE  + +G I+N++S+        G R   ++    Y+  K +  + L   L 
Sbjct: 128 QSM----KERNVDDGHIININSM-------SGHRVPPVSVFHFYAATK-HAVTALTEGLR 175

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATT 234
             EL    +E   +I A S+ PGL+ T               F+F L  N P+ AA T
Sbjct: 176 -QEL----REAKTHIRATSISPGLVETE--------------FAFKLHDNDPEKAAAT 214

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 19/89 (21%)

Query: 4  GGASGIGLETARVLALRKAHVIIA----ARNMAAANEARQLILKED--DTARVDTLKLDL 57
          GG SGIGL TAR LA   A V++         AAA+E   L +  D  D   V+ L    
Sbjct: 14 GGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNAL---- 69

Query: 58 SSIASIKDFAQNFIALNLPLNILINNAGI 86
                  F          ++I  NNAGI
Sbjct: 70 --------FDTAAETYG-SVDIAFNNAGI 89

Length = 255

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 35/207 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG +G+G   A  LA   A +II        +E R+LI  E +  +V  +++DL+   S 
Sbjct: 22  GGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLI--EKEGRKVTFVQVDLTKPESA 78

Query: 64  KDFAQNFIALNLPLNILINNAG-IMFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +   +  +     ++IL+NNAG I   P  +  ++        N    + L+  +   M 
Sbjct: 79  EKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVM- 137

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK--LANILH--A 177
             AK+    G+I+N   IA   +++GG                AY  SK  +A +    A
Sbjct: 138 --AKQG--SGKIIN---IASMLSFQGGKFV------------PAYTASKHGVAGLTKAFA 178

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTN 204
           NEL+        NI  N++ PG I T 
Sbjct: 179 NELAAY------NIQVNAIAPGYIKTA 199

Length = 258

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 56/222 (25%), Positives = 89/222 (40%), Gaps = 44/222 (19%)

Query: 5   GAS-GIGLETARVLALRKAHVIIAARNMAAA--NEARQLILKEDDTA--------RVDTL 53
           GAS GIG   A  LA   A V++AA+  +      A+ L    ++TA        +   +
Sbjct: 10  GASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGGQALPI 69

Query: 54  KLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF----ATNHIGH 109
            +D+     ++   +  +     L+IL+NNAG ++    + ED    +F      N  G 
Sbjct: 70  VVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIW--LSLVEDTPAKRFDLMQRVNLRGT 127

Query: 110 FLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQS 169
           +LL+   L  M +  +     G I+N+S           +R  + +    Y+  KA G S
Sbjct: 128 YLLSQAALPHMVKAGQ-----GHILNISP-------PLSLRPARGD--VAYAAGKA-GMS 172

Query: 170 KLANILHANELSRRFQEEGVNITANSVHPG-----LIMTNLF 206
           +L   L A EL R        I  NS+ P         T L 
Sbjct: 173 RLTLGL-AAELRRH------GIAVNSLWPSTAIETPAATELS 207

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 9/141 (6%)

Query: 2   LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           + G A GIG   AR LA   A V    RN     E   +           T KLD++  A
Sbjct: 3   VTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLE--LVADLRRYGYPFATYKLDVADSA 60

Query: 62  SIKDFAQNFIALNLPLNILINNAGI--MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
           ++ +  Q       P+++L+N AGI  +     +S++  +  FA N  G F   N+    
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVF---NVSQAV 117

Query: 120 MNRTAKETGIEGRIVNLSSIA 140
             R  +     G IV + S A
Sbjct: 118 SPRMKRRRS--GAIVTVGSNA 136

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 38/209 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAA-ANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G   GIG   A  LA   + V++ A+  A   NE  +++ +         +  D+S+   
Sbjct: 13  GSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG--VLADVSTREG 70

Query: 63  IKDFAQNFIALNLPLNILINNAGI-MFCPYQISEDG-IEMQFATNHIGHFLLTNLLLDTM 120
            +  A+  I      +IL+NNAG+ +F P+   +D  I+   +T+       +  L    
Sbjct: 71  CETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQEL---- 126

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI----LH 176
              AKE    G IVN++S+A       GIR        G S    YG  K A I      
Sbjct: 127 ---AKEMREGGAIVNIASVA-------GIRPAY-----GLS---IYGAMKAAVINLTKYL 168

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNL 205
           A EL+ +       I  N++ PG + T L
Sbjct: 169 ALELAPK-------IRVNAIAPGFVKTKL 190

Length = 252

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 28/164 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG++G+G   A      KA V+I  R +   AN+  + I K    A    +K D++  + 
Sbjct: 14  GGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAI--AVKGDVTVESD 71

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF-------ATNHIGHFLLTNL 115
           + +  Q  +     L+++INNAGI     + +    EM          TN  G FL +  
Sbjct: 72  VVNLIQTAVKEFGTLDVMINNAGI-----ENAVPSHEMSLEDWNKVINTNLTGAFLGSRE 126

Query: 116 LLDTMNRTAKETGIEGRIVNLSSI---------AHQYTYKGGIR 150
            +        E  I+G I+N+SS+          H    KGG++
Sbjct: 127 AIKYF----VEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVK 166

Length = 261

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 35/215 (16%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSS 59
           ++ G + GIG   A  LA     + +  AR+  AA E  + I  E    +   +K ++  
Sbjct: 8   LVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEI--EALGRKALAVKANVGD 65

Query: 60  IASIKDFAQNFIALNLPLNILINNA--GIMFCPYQISEDGIEMQFATNHIGHFLLTNLLL 117
           +  IK+           L++ +NNA  G++    ++ E   +     N          LL
Sbjct: 66  VEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNIN-------AKALL 118

Query: 118 DTMNRTAK--ETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
                 AK  E    G+I++LSS+       G IR+ +        +    G SK A  L
Sbjct: 119 FCAQEAAKLMEKVGGGKIISLSSL-------GSIRYLE--------NYTTVGVSKAA--L 161

Query: 176 HANELSRRFQEE--GVNITANSVHPGLIMTNLFKH 208
            A  L+R    E     I  N+V  G + T+  KH
Sbjct: 162 EA--LTRYLAVELAPKGIAVNAVSGGAVDTDALKH 194

Length = 250

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 1  MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
          ++ GG+SGIGL  AR  A   A V IA+R+      A + +      A V T  LD++  
Sbjct: 1  LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARAL---GGGAPVRTAALDITDE 57

Query: 61 ASIKDF 66
          A++  F
Sbjct: 58 AAVDAF 63

Length = 230

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 53/203 (26%), Positives = 79/203 (38%), Gaps = 23/203 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVD-TLKLDLSSIAS 62
           G A G+G   AR +A + A V +   N AA  +A    +       V      D++  A 
Sbjct: 6   GAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQ 65

Query: 63  IKDFAQNFIALNLPLNILINNAGI--MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            +            L++L+NNAG+       QI  D      A N    FL     L  +
Sbjct: 66  WQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYL 125

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
             +         IVN+SS+A          F+   D   Y+  KA   S   +I  A + 
Sbjct: 126 RASQP-----ASIVNISSVA---------AFKAEPDYTAYNASKAAVASLTKSI--ALDC 169

Query: 181 SRRFQEEGVNITANSVHPGLIMT 203
           +RR    G+++  NS+HP  I T
Sbjct: 170 ARR----GLDVRCNSIHPTFIRT 188

Length = 251

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 17/148 (11%)

Query: 2   LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           + G ASG GL  AR+ A     +++A     A + A   +      A V  ++ D+S  A
Sbjct: 11  ITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAEL--RAQGAEVLGVRTDVSDAA 68

Query: 62  SIKDFAQNFIALNLPLNILINNAGI-----MFCPYQISEDGIEMQFATNHIGHF----LL 112
            ++  A   +     +++L NNAG+     +   ++ S    E     N  G        
Sbjct: 69  QVEALADAALERFGAVHLLFNNAGVGAGGLV---WENSLADWEWVLGVNLWGVIHGVRAF 125

Query: 113 TNLLLDTMNRTAKETGIEGRIVNLSSIA 140
           T L+L       K+   EG IVN +S+A
Sbjct: 126 TPLMLA---AAEKDPAYEGHIVNTASMA 150

Length = 287

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 42.8 bits (101), Expect = 8e-05
 Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 36/210 (17%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ GG  GIG   A       A V +    +  + E     L+E     V T+K D+ + 
Sbjct: 11  LITGGTRGIGRAIAEAFLREGAKVAV----LYNSAENEAKELREKG---VFTIKCDVGNR 63

Query: 61  ASIKDFAQNFIALNLP-LNILINNAGIMFC-PY-QISEDGIEMQFATNHIGHFLLTNLLL 117
             +K  ++  +      +++L+NNAGIM+  P+ +  E+        N  G    T   L
Sbjct: 64  DQVKK-SKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFL 122

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
             +  +       G IVN++S A   T   G  F              Y  +K   I+  
Sbjct: 123 PLLKLSKN-----GAIVNIASNAGIGTAAEGTTF--------------YAITKAGIII-- 161

Query: 178 NELSRR--FQEEGVNITANSVHPGLIMTNL 205
             L+RR  F+     I  N+V PG + T++
Sbjct: 162 --LTRRLAFELGKYGIRVNAVAPGWVETDM 189

Length = 255

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 9e-05
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 26/161 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAA-ANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG SGIG   A + A   A + I   +    ANE +Q + KE    +   +  D+S  A 
Sbjct: 53  GGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEG--VKCLLIPGDVSDEAF 110

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQ--------ISEDGIEMQFATNHIGHFLLTN 114
            KD  +  +     L+IL+NNA      +Q        I+ + ++  F TN   +F +T 
Sbjct: 111 CKDAVEETVRELGRLDILVNNAA-----FQYPQQSLEDITAEQLDKTFKTNIYSYFHMTK 165

Query: 115 LLLDTMNR------TAKETGIEGRIVNLSSIAHQYTYKGGI 149
             L  + +      T   TG EG   N + I +  T KG I
Sbjct: 166 AALPHLKQGSAIINTGSITGYEG---NETLIDYSAT-KGAI 202

Length = 290

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 37/213 (17%)

Query: 1   MLAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS 58
           ++ G +SGIG   A   A + A   V   AR    A +   L       A    ++LD++
Sbjct: 5   LITGCSSGIG--RALADAFKAAGYEVWATARK---AEDVEAL-----AAAGFTAVQLDVN 54

Query: 59  SIASIKDFAQNFIALNLPLNILINNAG--IMFCPYQISEDGIEMQFATNHIGHFLLTNLL 116
             A++   A+   A +  L++LINNAG   M        + +  QF TN      +T  L
Sbjct: 55  DGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRAL 114

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              + R+       G +VN+ S++       G+    +   AG     AY  SK A  +H
Sbjct: 115 FPLLRRS------RGLVVNIGSVS-------GVL---VTPFAG-----AYCASKAA--VH 151

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHS 209
           A   + R +     +    V PG I +    ++
Sbjct: 152 ALSDALRLELAPFGVQVMEVQPGAIASQFASNA 184

Length = 274

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 54/208 (25%), Positives = 78/208 (37%), Gaps = 48/208 (23%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE--DDTARVDTLKLDLSSIA 61
           G A GIG   A  LA   A V++  R     +E    +L E             DL + A
Sbjct: 11  GAAQGIGRGVAERLAGEGARVLLVDR-----SELVHEVLAEILAAGDAAHVHTADLETYA 65

Query: 62  SIKDFAQNFIALNLPLNILINNAG--IMFCPYQ-ISEDGIEMQFATNHIGHFLLTNL--- 115
             +   +  +     +++LINN G  I   PY+   E+ IE +   +     L   L   
Sbjct: 66  GAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRS-----LFPTLWCC 120

Query: 116 ---LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLA 172
              L   + R       +G IVN+SSIA     +G  R               Y  +K  
Sbjct: 121 RAVLPHMLERQ------QGVIVNVSSIA----TRGIYRI-------------PYSAAKGG 157

Query: 173 -NILHANELSRRFQEEGVNITANSVHPG 199
            N L A+ L+     +G  I  N+V PG
Sbjct: 158 VNALTAS-LAFEHARDG--IRVNAVAPG 182

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 53/206 (25%), Positives = 76/206 (36%), Gaps = 36/206 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVD---TLKLDLSSI 60
           GGA  IG   AR L      V I     AA  EA  L   E +  R      L+ DL   
Sbjct: 13  GGARRIGAAIARTLHAAGYRVAIHYHRSAA--EADAL-AAELNALRPGSAAALQADLLDP 69

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNLLL 117
            ++ +     +A    L+ L+NNA   F P     I+E   +  FA+N    F L+    
Sbjct: 70  DALPELVAACVAAFGRLDALVNNAS-SFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAA 128

Query: 118 DTMNRTAKETGIEGRIVNLSSI-AHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
             + +        G IVN++ I A +                GY     Y  +K A  + 
Sbjct: 129 PQLRKQR------GAIVNITDIHAER-------------PLKGYP---VYCAAKAALEML 166

Query: 177 ANELSRRFQEEGVNITANSVHPGLIM 202
              L+    E    +  N+V PG I+
Sbjct: 167 TRSLAL---ELAPEVRVNAVAPGAIL 189

Length = 249

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 33/205 (16%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G + GIG E AR+L  + A V      +      +   L  +   RV     +LS  
Sbjct: 10  LVTGASGGIGEEIARLLHAQGAIV-----GLHGTRVEKLEALAAELGERVKIFPANLSDR 64

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTNLL 116
             +K   Q   A    ++IL+NNAGI    +F   ++S++  +     N    F LT  L
Sbjct: 65  DEVKALGQKAEADLEGVDILVNNAGITKDGLFV--RMSDEDWDSVLEVNLTATFRLTREL 122

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              M R        GRI+N++S+       G         +A Y   KA G    +  L 
Sbjct: 123 THPMMRRR-----YGRIINITSVVGVTGNPG---------QANYCASKA-GMIGFSKSL- 166

Query: 177 ANELSRRFQEEGVNITANSVHPGLI 201
           A E++ R      N+T N V PG I
Sbjct: 167 AQEIATR------NVTVNCVAPGFI 185

Length = 245

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 14/150 (9%)

Query: 1   MLAGGASGIGLE-TARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS 59
            + G +SG G   T R+LA R   V    R   A ++     LK     R+  L+LD++ 
Sbjct: 6   FITGASSGFGRGMTERLLA-RGDRVAATVRRPDALDD-----LKARYGDRLWVLQLDVTD 59

Query: 60  IASIKDFAQNFIALNLPLNILINNAGI-MFCPYQ-ISEDGIEMQFATNHIGHFLLTNLLL 117
            A+++       A    ++++++NAG  +F   + +S+  I  Q  TN IG   +    L
Sbjct: 60  SAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAAL 119

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKG 147
             + R        GRIV +SS   Q  Y G
Sbjct: 120 PHLRRQGG-----GRIVQVSSEGGQIAYPG 144

Length = 276

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 52/220 (23%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI-LKEDDTARVDTLKLDLSSIAS 62
           G + G+G   A  L  +  HVI  +R      E ++L  L E   + +    LDL  +  
Sbjct: 8   GTSQGLGEAIANQLLEKGTHVISISRT-----ENKELTKLAEQYNSNLTFHSLDLQDVHE 62

Query: 63  IKDFAQNFIALNLPLNI-------LINNAGIMFCPY----QISEDGIEMQFATNHIGHFL 111
           +     NF  +   +         LINNAG M  P     +   + +      N +   +
Sbjct: 63  L---ETNFNEILSSIQEDNVSSIHLINNAG-MVAPIKPIEKAESEELITNVHLNLLAPMI 118

Query: 112 LTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKL 171
           LT+  +    +  K+  ++ R++N+SS A +  Y G                 AY  SK 
Sbjct: 119 LTSTFM----KHTKDWKVDKRVINISSGAAKNPYFG---------------WSAYCSSK- 158

Query: 172 ANILHANELSRRFQEE------GVNITANSVHPGLIMTNL 205
           A +   +  ++    E       V I A    PG++ TN+
Sbjct: 159 AGL---DMFTQTVATEQEEEEYPVKIVA--FSPGVMDTNM 193

Length = 251

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)

Query: 1  MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
          ++ GG+SG+G   A+  A   A+V+I  R      EA+  I  E    +V T+++D+ + 
Sbjct: 5  IITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI--EQFPGQVLTVQMDVRNP 62

Query: 61 ASIKDFAQNFIALNLPLNILINN-AGIMFCP 90
            ++   +        ++ LINN AG   CP
Sbjct: 63 EDVQKMVEQIDEKFGRIDALINNAAGNFICP 93

Length = 252

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 40.5 bits (96), Expect = 3e-04
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 2  LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILK-EDDTARVDTLKLDLSS 59
          + GG  G+G   AR LA R A  +++ +R+   A  A  L+ + E   ARV  +  D++ 
Sbjct: 5  ITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACDVAD 64

Query: 60 IASIKDFAQNFIALNLPLNILINNAGI 86
            ++        A+  PL  +I+ AG+
Sbjct: 65 RDALAAVLAAIPAVEGPLTGVIHAAGV 91

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 1  MLAGGASGIGLETARVLALRKAHVIIAARN----MAAANEARQLILKEDDTARVDTLKLD 56
           + G ASGIG  TA  LA + A + +  R+         +AR L          +   LD
Sbjct: 4  FVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL-----GGTVPEHRALD 58

Query: 57 LSSIASIKDFAQNFIALNLPLNILINNAGI 86
          +S   ++  FA +  A +  +++++N AGI
Sbjct: 59 ISDYDAVAAFAADIHAAHGSMDVVMNIAGI 88

Length = 272

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 16/140 (11%)

Query: 4   GGASGIGLETARVLALRKAH-VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G +SG G   A+  AL   H V+   R+ AA  +      +     R     LD++   +
Sbjct: 11  GVSSGFGRALAQ-AALAAGHRVVGTVRSEAARAD-----FEALHPDRALARLLDVTDFDA 64

Query: 63  IKDFAQNFIALNLPLNILINNAGI-MFCPYQISEDGIEM--QFATNHIGHFLLTNLLLDT 119
           I     +  A   P+++L+NNAG       + S    EM  QF  N  G   +T  +L  
Sbjct: 65  IDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPL-AEMRRQFEVNVFGAVAMTKAVLPG 123

Query: 120 MNRTAKETGIEGRIVNLSSI 139
           M    +     G IVN++S+
Sbjct: 124 MRARRR-----GHIVNITSM 138

Length = 277

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 14/148 (9%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA--RVDTLKLDLS 58
           ++ G A+G+G   A  LA   A V++   N  A+      +L E   A  +   +  D+S
Sbjct: 16  VVTGAAAGLGRAEALGLARLGATVVV---NDVASALDASDVLDEIRAAGAKAVAVAGDIS 72

Query: 59  SIASIKDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTN 114
             A+  +     + L   L+I++NNAGI    M   + +S++  +   A +  GHFLLT 
Sbjct: 73  QRATADELVATAVGLG-GLDIVVNNAGITRDRML--FNMSDEEWDAVIAVHLRGHFLLTR 129

Query: 115 LLLDTMNRTAKETG--IEGRIVNLSSIA 140
                    AK  G  + GRIVN SS A
Sbjct: 130 NAAAYWRAKAKAAGGPVYGRIVNTSSEA 157

Length = 306

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 16/145 (11%)

Query: 3   AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
            G    IG    + +      VI A  +  A NE  + + KE  + ++  ++LD++   S
Sbjct: 10  TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQES 69

Query: 63  IKDFAQNFIALNLPLNILINNA-------GIMFCPYQISEDGIEMQFATNHIG-HFLLTN 114
           +++F          ++  +N A       G  F  + +S D    +  + H+G  FL + 
Sbjct: 70  LEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKF--FDVSLDDFN-ENLSLHLGSSFLFSQ 126

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSI 139
                  +        G +VN+SSI
Sbjct: 127 QFAKYFKKQGG-----GNLVNISSI 146

Length = 256

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 54/211 (25%), Positives = 79/211 (37%), Gaps = 44/211 (20%)

Query: 2   LAGGAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           L  GA+ GIGL  +  LA     VI  AR+               D  +       ++ I
Sbjct: 7   LVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEI 66

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLD 118
                          P++ ++NN GI +  P  +I    ++  +  N      +T   L+
Sbjct: 67  H--------------PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLE 112

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILH 176
            M         +GRIVN+ S A               DR  YS  K+   G ++      
Sbjct: 113 GMKLRE-----QGRIVNICSRAIFGAL----------DRTSYSAAKSALVGCTR----TW 153

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
           A EL+    E G  IT N+V PG I T LF+
Sbjct: 154 ALELA----EYG--ITVNAVAPGPIETELFR 178

Length = 234

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 28/125 (22%)

Query: 79  ILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIV 134
           IL+NNAGI     F   ++SE+  ++    +  G F +T      M +        GRI+
Sbjct: 91  ILVNNAGILRDRSFA--KMSEEDWDLVMRVHLKGSFKVTRAAWPYMRKQKF-----GRII 143

Query: 135 NLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITAN 194
           N SS A  Y   G         +A YS  K  G   L+N L A E ++       NIT N
Sbjct: 144 NTSSAAGLYGNFG---------QANYSAAKL-GLLGLSNTL-AIEGAKY------NITCN 186

Query: 195 SVHPG 199
           ++ P 
Sbjct: 187 TIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 4  GGASGIGLETARVLALRKAHVIIAARNMAA-ANEARQLILKEDDTARVDTLKLDLSSIAS 62
          G + GIG +TA++LA   AHV++  R  A  AN+    I  E    R   +  DL+   S
Sbjct: 13 GSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEI--EAAGGRASAVGADLTDEES 70

Query: 63 IKDFAQNFIALNLPLNILINNA 84
          +             L+ L+ NA
Sbjct: 71 VAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 40/144 (27%), Positives = 56/144 (38%), Gaps = 21/144 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTAR----VDTLKLDLSS 59
           G  S I    AR  A   A + +AAR++          L +D  AR    V T +LD+  
Sbjct: 8   GATSDIARACARRYAAAGARLYLAARDVERLER-----LADDLRARGAVAVSTHELDILD 62

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIE---MQFATNHIGHFLLTNLL 116
            AS   F  +  AL    +I++   G +       E        +F TN  G   L  LL
Sbjct: 63  TASHAAFLDSLPAL---PDIVLIAVGTL-GDQAACEADPALALREFRTNFEGPIALLTLL 118

Query: 117 LDTMNRTAKETGIEGRIVNLSSIA 140
            +       E    G IV +SS+A
Sbjct: 119 ANRF-----EARGSGTIVGISSVA 137

Length = 243

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 4  GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
          GGASGIG   +  LA   A  +I  R+      A +L        R + +++DL+  A  
Sbjct: 14 GGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRAL---QPRAEFVQVDLTDDAQC 70

Query: 64 KDFAQNFIALNLPLNILINNAGI 86
          +D  +  +A    ++ L+NNAG+
Sbjct: 71 RDAVEQTVAKFGRIDGLVNNAGV 93

Length = 258

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 54/220 (24%), Positives = 78/220 (35%), Gaps = 46/220 (20%)

Query: 5   GASGI-GLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  G+ G   A+ LA   A V I  RN   A      I      A    +K D+    S+
Sbjct: 17  GGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALA--VKADVLDKESL 74

Query: 64  KDFAQNFIALNLPLNILINNAG-------------------IMFCPYQISEDGIEMQFAT 104
           +   Q  +    P +ILIN AG                     F  + + E+G E  F  
Sbjct: 75  EQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTF--FDLDEEGFEFVFDL 132

Query: 105 NHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKK 164
           N +G  L T +    M    ++    G I+N+SS+           F  +     YS  K
Sbjct: 133 NLLGTLLPTQVFAKDM--VGRK---GGNIINISSMN---------AFTPLTKVPAYSAAK 178

Query: 165 AYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN 204
           A   S     L A   ++      V I  N++ PG  +T 
Sbjct: 179 A-AISNFTQWL-AVHFAK------VGIRVNAIAPGFFLTE 210

Length = 278

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 41/146 (28%), Positives = 59/146 (40%), Gaps = 18/146 (12%)

Query: 4   GGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG  G+G   AR  A R A  ++I  RN A   EA+   L+     +   ++ DLS +  
Sbjct: 13  GGTQGLGAAIARAFAERGAAGLVICGRN-AEKGEAQAAELEALGA-KAVFVQADLSDVED 70

Query: 63  IKDFAQNFIALNLPLNILINNAG------IMFCPYQISEDGIEMQFATNHIGHFLLTNLL 116
            +            L+ L+N AG      I+      S +  +  FA N    F L    
Sbjct: 71  CRRVVAAADEAFGRLDALVNAAGLTDRGTIL----DTSPELFDRHFAVNVRAPFFLMQEA 126

Query: 117 LDTMNRTAKETGIEGRIVNLSSI-AH 141
           +  M R       EG IVN+ S+ AH
Sbjct: 127 IKLMRR----RKAEGTIVNIGSMSAH 148

Length = 260

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 52/208 (25%), Positives = 79/208 (37%), Gaps = 34/208 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMA----AANEARQLILKEDDTARVDTLKLDLSS 59
           G   GIG   A  LA    +V + AR        A E     +K      V     D+S 
Sbjct: 14  GAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVK------VVIATADVSD 67

Query: 60  IASIKDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLL 117
              +    +        ++ILINNAGI  F  + ++     E     N +G +  T  +L
Sbjct: 68  YEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVL 127

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
            +M     E    G I+N+SS A Q   KG          A  S   AY  SK   +   
Sbjct: 128 PSM----IERQ-SGDIINISSTAGQ---KGA---------AVTS---AYSASKFGVLGLT 167

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNL 205
             L +  ++  + +TA  + P  + T++
Sbjct: 168 ESLMQEVRKHNIRVTA--LTPSTVATDM 193

Length = 239

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 49/210 (23%), Positives = 80/210 (38%), Gaps = 40/210 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ GIG      L    ++VI                +KE     VD  K+D+S+   +
Sbjct: 13  GGSQGIGKAVVNRLKEEGSNVI-------------NFDIKEPSYNDVDYFKVDVSNKEQV 59

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPYQISEDGIEMQFA-TNHIGHFLLTNLLLDTMN 121
                  I+    ++IL+NNAGI  +      E+    +    N  G FL++   +  M 
Sbjct: 60  IKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYML 119

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           +  K     G I+N++S+      +               +  AY  SK A +     L+
Sbjct: 120 KQDK-----GVIINIASVQSFAVTR---------------NAAAYVTSKHAVL----GLT 155

Query: 182 RRFQ-EEGVNITANSVHPGLIMTNLFKHSA 210
           R    +    I   +V PG I T L + +A
Sbjct: 156 RSIAVDYAPTIRCVAVCPGSIRTPLLEWAA 185

Length = 258

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 11/142 (7%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G A GIG   A+      A V IA  N+ AA      I           + LD++  
Sbjct: 7   LITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEI-----GPAACAISLDVTDQ 61

Query: 61  ASIKDFAQNFIALNLPLNILINNAGI--MFCPYQISEDGIEMQFATNHIGHFLLTNLLLD 118
           ASI       +     ++IL+NNA +  +     I+ +  +  FA N  G       ++ 
Sbjct: 62  ASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTL----FMMQ 117

Query: 119 TMNRTAKETGIEGRIVNLSSIA 140
            + R     G  G+I+N++S A
Sbjct: 118 AVARAMIAQGRGGKIINMASQA 139

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 4  GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
          G A GIG   AR        V+    + AA              AR   +  DL+  AS+
Sbjct: 9  GAAGGIGQALARRFLAAGDRVLALDIDAAALAAF----ADALGDARFVPVACDLTDAASL 64

Query: 64 KDFAQNFIALNLPLNILINNAG 85
               N  A   P+++L+ NAG
Sbjct: 65 AAALANAAAERGPVDVLVANAG 86

Length = 257

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 11/143 (7%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           M+ G ASG+G   A   A     + +A  N     E  +L+   +        + D+   
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLL--REAGGDGFYQRCDVRDY 61

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIE---MQFATNHIGHFLLTNLLL 117
           + +   AQ        +++++NNAG+    +   E  +E    Q A N +G        L
Sbjct: 62  SQLTALAQACEEKWGGIDVIVNNAGVASGGF-FEELSLEDWDWQIAINLMGVVKGCKAFL 120

Query: 118 DTMNRTAKETGIEGRIVNLSSIA 140
               R        GRIVN++S+A
Sbjct: 121 PLFKRQK-----SGRIVNIASMA 138

Length = 270

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 13/115 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG   A++ A   A V++ AR  A  ++    I  E   A    L  D+      
Sbjct: 13  GASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVA--LAGDVRD---- 66

Query: 64  KDFAQNFIALNLP----LNILINNAGIM--FCPY-QISEDGIEMQFATNHIGHFL 111
           + +A+  +AL +     L+I  NNAG +    P  ++S +G     ATN    FL
Sbjct: 67  EAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFL 121

Length = 254

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 48/212 (22%), Positives = 71/212 (33%), Gaps = 39/212 (18%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G + G+GL     L  R   V    R        + L         V   KLD++  
Sbjct: 5   LIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQAL-------PGVHIEKLDMNDP 57

Query: 61  ASIKDFAQNFIALN-LPLNILINNAGIM----FCPYQISEDGIEMQFATNHIGHFLLTNL 115
           AS+    Q    L     ++L  NAGI           +   I   F TN I    L   
Sbjct: 58  ASLDQLLQ---RLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARR 114

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
           LL  +         +G +  +SS               + D         Y  SK A   
Sbjct: 115 LLGQVRPG------QGVLAFMSSQLGSVE---------LPDGGE---MPLYKASKAA--- 153

Query: 176 HANELSRRFQEE--GVNITANSVHPGLIMTNL 205
             N ++R F  E     +T  S+HPG + T++
Sbjct: 154 -LNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184

Length = 225

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 54/211 (25%), Positives = 85/211 (40%), Gaps = 34/211 (16%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G + GIG E A   A   A VI+  RN     +    I  E+   +     LDL + 
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHI-NEEGGRQPQWFILDLLTC 66

Query: 61  AS--IKDFAQNFIALNLP-LNILINNAGIMFCPYQISEDGIE-----MQFATNHIGHFLL 112
            S   +  AQ  IA+N P L+ +++NAG++     +SE   +      Q   N    F+L
Sbjct: 67  TSENCQQLAQR-IAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVN--ATFML 123

Query: 113 TNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLA 172
           T  LL  + ++       G +V  SS                  R G ++  AY  SK A
Sbjct: 124 TQALLPLLLKSD-----AGSLVFTSSSV---------------GRQGRANWGAYAVSKFA 163

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMT 203
                  L+  +  +  N+  N ++PG   T
Sbjct: 164 TEGLXQVLADEY--QQRNLRVNCINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 4  GGASGIGLETARVLALRKAHVIIAARNMAAANE-ARQLILKEDDTARVDTLKLDLSSIAS 62
          G A GIG E AR L  R A + +     A     A +L        RV T+  D++ +A+
Sbjct: 16 GAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL----GGDDRVLTVVADVTDLAA 71

Query: 63 IKDFAQNFIALNLPLNILINNAGI 86
          ++  A+  +     +++++ NAGI
Sbjct: 72 MQAAAEEAVERFGGIDVVVANAGI 95

Length = 296

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 51/210 (24%), Positives = 78/210 (37%), Gaps = 48/210 (22%)

Query: 7   SGIGLETARVLALR----KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           SG+G    R LA+R     A V++AAR     +E    I  +D   R   +  D++    
Sbjct: 11  SGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEI--DDLGRRALAVPTDITDEDQ 68

Query: 63  IKDFAQNFIALNLP----LNILINNAGIMFCPYQISEDGIEMQ-----FATNHIGHFLLT 113
                 N +AL L     ++ L+NNA  +  P        +          N +G   LT
Sbjct: 69  ----CANLVALALERFGRVDALVNNAFRV--PSMKPLADADFAHWRAVIELNVLGTLRLT 122

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSS--IAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKL 171
                 +     E+G  G IV ++S  + H               +  Y    AY  +K 
Sbjct: 123 QAFTPAL----AESG--GSIVMINSMVLRHS--------------QPKYG---AYKMAKG 159

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLI 201
           A +  +  L+     +G  I  NSV PG I
Sbjct: 160 ALLAASQSLATELGPQG--IRVNSVAPGYI 187

Length = 258

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 44/197 (22%), Positives = 76/197 (38%), Gaps = 25/197 (12%)

Query: 10  GLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQN 69
           GL     + L KA   I    +A A E +  +  E    +   +  DL     I      
Sbjct: 19  GLGQGMAIGLAKAGADIVGVGVAEAPETQAQV--EALGRKFHFITADLIQQKDIDSIVSQ 76

Query: 70  FIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET 127
            + +   ++ILINNAGI+      +      +     N    F L+      + +   + 
Sbjct: 77  AVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQ----AVAKQFVKQ 132

Query: 128 GIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEE 187
           G  G+I+N   IA   +++GGIR              +Y  SK A +     L+    + 
Sbjct: 133 GNGGKIIN---IASMLSFQGGIRV------------PSYTASKSAVMGLTRALATELSQY 177

Query: 188 GVNITANSVHPGLIMTN 204
            +N+  N++ PG + T+
Sbjct: 178 NINV--NAIAPGYMATD 192

Length = 251

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 43/210 (20%), Positives = 67/210 (31%), Gaps = 35/210 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS---- 59
           G ASGIG ETA + A     V +   +          +        V    LD++     
Sbjct: 7   GAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAEL----GAENVVAGALDVTDRAAW 62

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLL 117
            A++ DFA         L+ L NNAG+    P+  +     +     N  G        L
Sbjct: 63  AAALADFAAA---TGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAAL 119

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
             +  T        R++N +S +  Y               G  D   Y  +K A     
Sbjct: 120 PYLKATPG-----ARVINTASSSAIY---------------GQPDLAVYSATKFAVRGLT 159

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFK 207
             L   +   G+ +    V P  + T +  
Sbjct: 160 EALDVEWARHGIRVAD--VWPWFVDTPILT 187

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 48/210 (22%), Positives = 75/210 (35%), Gaps = 40/210 (19%)

Query: 5   GAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G S G+G   A  L      V+  AR+   +  A           R+  ++LDLS  A+ 
Sbjct: 8   GHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAA-------GERLAEVELDLSDAAAA 60

Query: 64  KDFAQNFIALNLPLN----ILINNAGIMFCPYQIS---EDGIEMQFATNHIGHFLLTNLL 116
             +    +           +LINNAG +     ++      I      N     +LT  L
Sbjct: 61  AAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAAL 120

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
                  A     E RI+++SS A +  Y            AG+S    Y  +K A   H
Sbjct: 121 AQ-----AASDAAERRILHISSGAARNAY------------AGWS---VYCATKAALDHH 160

Query: 177 ANELSRRFQEEGVN-ITANSVHPGLIMTNL 205
           A    R    +    +   S+ PG++ T +
Sbjct: 161 A----RAVALDANRALRIVSLAPGVVDTGM 186

Length = 243

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 19/68 (27%)

Query: 1  MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
          ++ G    IGL  A++L+     VI A R+                  +V     D++  
Sbjct: 2  IVIGATGTIGLAVAQLLSAHGHEVITAGRS--------------SGDYQV-----DITDE 42

Query: 61 ASIKDFAQ 68
          ASIK   +
Sbjct: 43 ASIKALFE 50

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 52/210 (24%), Positives = 84/210 (40%), Gaps = 29/210 (13%)

Query: 1   MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           ++ G  +GIG E A   A   A V+++  N  AAN     I  +    +    + D++S 
Sbjct: 15  IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI--QQLGGQAFACRCDITSE 72

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFC-PYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
             +   A   ++    ++IL+NNAG     P+ +        +  N    F L+ L+   
Sbjct: 73  QELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE 132

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           M    K  G  G I+ ++S+A +            N         +Y  SK A    A+ 
Sbjct: 133 M---EKNGG--GVILTITSMAAENK----------NINMT-----SYASSKAA----ASH 168

Query: 180 LSRR--FQEEGVNITANSVHPGLIMTNLFK 207
           L R   F     NI  N + PG I+T+  K
Sbjct: 169 LVRNMAFDLGEKNIRVNGIAPGAILTDALK 198

Length = 255

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 48/221 (21%), Positives = 73/221 (33%), Gaps = 52/221 (23%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G ASGIG  TA +L      VI              + L+E D      +  DLS+    
Sbjct: 6   GAASGIGAATAELLEDAGHTVI-------------GIDLREAD------VIADLSTPEGR 46

Query: 64  KDFAQNFIAL-NLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
                + +A  +  L+ L+N AG+             +    N+ G   L   LL  + +
Sbjct: 47  AAAIADVLARCSGVLDGLVNCAGV---GGTT---VAGLVLKVNYFGLRALMEALLPRLRK 100

Query: 123 TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND---------------RAGYSDKKAYG 167
                G     V +SSIA            ++                  AG     AY 
Sbjct: 101 -----GHGPAAVVVSSIA---GAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYA 152

Query: 168 QSKLANILHANELSRR-FQEEGVNITANSVHPGLIMTNLFK 207
            SK A  +     +       GV +  N+V PG + T + +
Sbjct: 153 GSKEALTVWTRRRAATWLYGAGVRV--NTVAPGPVETPILQ 191

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	288
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	99.98
PRK06179	270	short chain dehydrogenase; Provisional	99.98
PRK07775	274	short chain dehydrogenase; Provisional	99.98
PRK07577	234	short chain dehydrogenase; Provisional	99.98
PRK07060	245	short chain dehydrogenase; Provisional	99.98
PRK09072	263	short chain dehydrogenase; Provisional	99.98
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK09135	249	pteridine reductase; Provisional	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.97
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.96
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK08017	256	oxidoreductase; Provisional	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.95
PRK08264	238	short chain dehydrogenase; Validated	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.94
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.93
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.92
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.9
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.89
PLN03209	576	translocon at the inner envelope of chloroplast su	99.88
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.87
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.86
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.86
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.86
PLN02583	297	cinnamoyl-CoA reductase	99.84
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.83
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.82
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.82
PLN02650	351	dihydroflavonol-4-reductase	99.82
PLN02214	342	cinnamoyl-CoA reductase	99.79
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.79
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.79
PRK06720	169	hypothetical protein; Provisional	99.79
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.78
PLN02653	340	GDP-mannose 4,6-dehydratase	99.77
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.77
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.76
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.75
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.75
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.75
PLN00198	338	anthocyanidin reductase; Provisional	99.74
PLN02572	442	UDP-sulfoquinovose synthase	99.74
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.73
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.71
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.7
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.7
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.7
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.7
PLN02240	352	UDP-glucose 4-epimerase	99.69
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.69
PLN02686	367	cinnamoyl-CoA reductase	99.68
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.68
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.68
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.65
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.64
PLN02427	386	UDP-apiose/xylose synthase	99.63
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.62
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.61
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.59
PLN02260	668	probable rhamnose biosynthetic enzyme	99.57
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.54
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.53
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.52
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.52
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.52
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.51
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.51
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.49
CHL00194	317	ycf39 Ycf39; Provisional	99.48
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.43
PLN02206	442	UDP-glucuronate decarboxylase	99.43
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.4
PRK07201	657	short chain dehydrogenase; Provisional	99.4
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.38
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.32
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.31
PRK05865	854	hypothetical protein; Provisional	99.29
PLN02778	298	3,5-epimerase/4-reductase	99.28
PLN02996	491	fatty acyl-CoA reductase	99.28
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.27
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.26
PRK08309	177	short chain dehydrogenase; Provisional	99.24
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.2
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.19
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.13
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.13
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.13
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.12
PLN02260	668	probable rhamnose biosynthetic enzyme	99.11
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.1
PLN02503	605	fatty acyl-CoA reductase 2	99.05
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.98
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.98
PLN00016	378	RNA-binding protein; Provisional	98.9
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.84
PRK12320	699	hypothetical protein; Provisional	98.8
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.75
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.58
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.52
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.5
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.46
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.44
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.36
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.35
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.32
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.29
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.29
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.23
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.2
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.14
PLN00106	323	malate dehydrogenase	98.14
COG2910	211	Putative NADH-flavin reductase [General function p	98.13
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.09
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.02
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.0
KOG2774	366	consensus NAD dependent epimerase [General functio	97.89
PTZ00325	321	malate dehydrogenase; Provisional	97.88
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.79
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.7
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.48
PRK09620	229	hypothetical protein; Provisional	97.42
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.4
PRK14982	340	acyl-ACP reductase; Provisional	97.38
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.38
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.36
COG3268	382	Uncharacterized conserved protein [Function unknow	97.25
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.24
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.19
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.16
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.14
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.09
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.07
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.99
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.96
PRK05086	312	malate dehydrogenase; Provisional	96.82
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.68
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.66
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.66
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.56
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.54
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.5
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.48
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.39
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.39
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.39
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.36
PRK06849	389	hypothetical protein; Provisional	96.34
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.29
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.26
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.22
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.2
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.19
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.19
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.18
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.17
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.16
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.1
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.09
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.08
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.07
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.07
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.07
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.06
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.06
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.01
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	95.97
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.96
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.95
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.92
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	95.9
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.88
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	95.87
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.86
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.85
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.85
PTZ00117	319	malate dehydrogenase; Provisional	95.84
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.83
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.83
PRK09496	453	trkA potassium transporter peripheral membrane com	95.81
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.79
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.77
PRK14968	188	putative methyltransferase; Provisional	95.72
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.7
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.66
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.6
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.59
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.57
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.5
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.49
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.46
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.42
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.36
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	95.31
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.26
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.22
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.22
PRK05442	326	malate dehydrogenase; Provisional	95.21
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.18
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.13
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.12
PRK08328	231	hypothetical protein; Provisional	95.11
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.09
PRK08223	287	hypothetical protein; Validated	95.08
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.06
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.06
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.03
PLN02602	350	lactate dehydrogenase	95.01
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	94.94
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	94.93
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	94.86
PF03808	172	Glyco_tran_WecB: Glycosyl transferase WecB/TagA/Cp	94.84
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	94.82
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	94.81
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.81
PTZ00082	321	L-lactate dehydrogenase; Provisional	94.79
COG4123	248	Predicted O-methyltransferase [General function pr	94.78
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.69
KOG4288	283	consensus Predicted oxidoreductase [General functi	94.68
PRK08655	437	prephenate dehydrogenase; Provisional	94.66
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.54
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	94.49
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	94.42
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	94.41
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	94.41
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	94.37
PRK04148	134	hypothetical protein; Provisional	94.35
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	94.32
TIGR00696	177	wecB_tagA_cpsF bacterial polymer biosynthesis prot	94.32
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	94.32
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.28
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.23
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	94.22
PRK07877	722	hypothetical protein; Provisional	94.22
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	94.19
PRK06223	307	malate dehydrogenase; Reviewed	94.19
PRK09496	453	trkA potassium transporter peripheral membrane com	94.08
cd06533	171	Glyco_transf_WecG_TagA The glycosyltransferase Wec	94.04
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	93.92
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	93.86
PLN00203	519	glutamyl-tRNA reductase	93.8
PRK07411	390	hypothetical protein; Validated	93.69
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	93.53
PRK14851	679	hypothetical protein; Provisional	93.48
PRK14852	989	hypothetical protein; Provisional	93.48
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	93.39
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	93.31
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	93.3
PF03848	192	TehB: Tellurite resistance protein TehB; InterPro:	93.26
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	93.17
PRK10669	558	putative cation:proton antiport protein; Provision	93.03
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.02
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	92.99
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	92.95
COG2130	340	Putative NADP-dependent oxidoreductases [General f	92.92
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	92.9
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	92.84
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	92.8
PTZ00354	334	alcohol dehydrogenase; Provisional	92.78
PRK08306	296	dipicolinate synthase subunit A; Reviewed	92.74
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	92.71
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	92.68
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	92.65
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	92.62
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	92.6
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	92.59
PRK14901	434	16S rRNA methyltransferase B; Provisional	92.43
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	92.29
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	92.29
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	92.28
PLN02740	381	Alcohol dehydrogenase-like	92.12
KOG3191	209	consensus Predicted N6-DNA-methyltransferase [Tran	92.05
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	92.01
PF13649	101	Methyltransf_25: Methyltransferase domain; PDB: 3B	91.95
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	91.88
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	91.86
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	91.86
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	91.84
PRK15128	396	23S rRNA m(5)C1962 methyltransferase; Provisional	91.75
PRK14902	444	16S rRNA methyltransferase B; Provisional	91.69
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	91.61
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	91.55
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	91.5
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	91.43
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	91.23
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	91.2
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	91.18
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	91.18
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	91.09
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	91.09
COG5322	351	Predicted dehydrogenase [General function predicti	91.09
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	91.01
PRK13771	334	putative alcohol dehydrogenase; Provisional	90.98
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	90.91
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	90.86
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	90.8
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	90.74
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	90.69
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	90.67
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	90.61
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	90.58
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	90.57
PLN02178	375	cinnamyl-alcohol dehydrogenase	90.51
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	90.48
PLN02586	360	probable cinnamyl alcohol dehydrogenase	90.39

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-45  Score=314.29  Aligned_cols=271  Identities=48%  Similarity=0.775  Sum_probs=244.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||+++|+.|+++|++|++.+||.++.+++.+.+....+..++.+++||++|.+++.++++++.+...++|++
T Consensus        39 vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvL  118 (314)
T KOG1208|consen   39 LVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVL  118 (314)
T ss_pred             EEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEE
Confidence            59999999999999999999999999999999999999999987778889999999999999999999999999999999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC-
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG-  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~-  159 (288)
                      |||||++.+....+.|+++..|.+|++|+|.|++.++|.|+++.     ++|||+|||..+    ....+.++++.... 
T Consensus       119 InNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-----~~RIV~vsS~~~----~~~~~~~~l~~~~~~  189 (314)
T KOG1208|consen  119 INNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-----PSRIVNVSSILG----GGKIDLKDLSGEKAK  189 (314)
T ss_pred             EeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-----CCCEEEEcCccc----cCccchhhccchhcc
Confidence            99999999888889999999999999999999999999999875     589999999987    23456666665554 


Q ss_pred             -CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC-CCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          160 -YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN-LFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       160 -~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                       +....+|+.||.++..+++.|++++.. |  |.+++++||.+.|+ +.+.......+...+...+++++++.|++.+|+
T Consensus       190 ~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~--V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~  266 (314)
T KOG1208|consen  190 LYSSDAAYALSKLANVLLANELAKRLKK-G--VTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGAATTCYA  266 (314)
T ss_pred             CccchhHHHHhHHHHHHHHHHHHHHhhc-C--ceEEEECCCcccccceecchHHHHHHHHHHHHHhccCHHHHhhheehh
Confidence             667778999999999999999999998 6  99999999999999 555333444466677777889999999999999


Q ss_pred             hcCCCccCCCceeeccCccCCCCccccCHHHHHHHHHHHHHHHHhh
Q 023054          238 ALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSA  283 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (288)
                      +.+|+-..++|.|+.++..........|++.++++|+.+++++...
T Consensus       267 a~~p~~~~~sg~y~~d~~~~~~~~~a~d~~~~~~lw~~s~~l~~~~  312 (314)
T KOG1208|consen  267 ALSPELEGVSGKYFEDCAIAEPSEEALDEELAEKLWKFSEELIDEQ  312 (314)
T ss_pred             ccCccccCccccccccccccccccccCCHHHHHHHHHHHHHHhhhc
Confidence            9999899999999999999999999999999999999999987653

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=4.2e-45  Score=279.91  Aligned_cols=231  Identities=23%  Similarity=0.247  Sum_probs=204.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++..|+++|++|++.+++...++++...+..   ..+...+.||+++..+++..+++..+.++.+++|
T Consensus        18 ~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvl   94 (256)
T KOG1200|consen   18 AVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVL   94 (256)
T ss_pred             EEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---CCccceeeeccCcHHHHHHHHHHHHHhcCCCcEE
Confidence            4899999999999999999999999999999988888777633   2467889999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .....++|++.+++|+.|.|+++|++...|.....   .+.+||||||+.+..               
T Consensus        95 VncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~---~~~sIiNvsSIVGki---------------  156 (256)
T KOG1200|consen   95 VNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ---QGLSIINVSSIVGKI---------------  156 (256)
T ss_pred             EEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC---CCceEEeehhhhccc---------------
Confidence            9999998763  36788999999999999999999999998654321   156999999999887               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      |..+++.|+++|.++.+|++++++|++.++  ||||.|+||+|.|||+...+.  ...+...+|..++..+||+|+.++|
T Consensus       157 GN~GQtnYAAsK~GvIgftktaArEla~kn--IrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~f  234 (256)
T KOG1200|consen  157 GNFGQTNYAASKGGVIGFTKTAARELARKN--IRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLF  234 (256)
T ss_pred             ccccchhhhhhcCceeeeeHHHHHHHhhcC--ceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHH
Confidence            466889999999999999999999999999  999999999999999987743  3446667899999999999999999


Q ss_pred             HhcCCCccCCCceeeccCc
Q 023054          237 VALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~~~~  255 (288)
                      |+| +.++|+||+.+...|
T Consensus       235 LAS-~~ssYiTG~t~evtG  252 (256)
T KOG1200|consen  235 LAS-DASSYITGTTLEVTG  252 (256)
T ss_pred             Hhc-cccccccceeEEEec
Confidence            997 999999999887443

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-41  Score=294.23  Aligned_cols=271  Identities=35%  Similarity=0.500  Sum_probs=218.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.++.++..+++....++.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        18 lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~l   97 (313)
T PRK05854         18 VVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLL   97 (313)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEE
Confidence            69999999999999999999999999999999999888888776666679999999999999999999999999999999


Q ss_pred             EEccccCCCC-CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||||+.... ...+.++++.+|++|+.+++.+++.++|.|.+.      .++||++||..+..+   ..++.++.....
T Consensus        98 i~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~------~~riv~vsS~~~~~~---~~~~~~~~~~~~  168 (313)
T PRK05854         98 INNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG------RARVTSQSSIAARRG---AINWDDLNWERS  168 (313)
T ss_pred             EECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC------CCCeEEEechhhcCC---CcCccccccccc
Confidence            9999987543 356789999999999999999999999999764      479999999987653   344555555566


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--------HHHHHHHHHH--hhhcCChHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--------VVMRFLKFFS--FFLWKNVPQ  229 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~--~~~~~~~~~  229 (288)
                      +++...|+.||+|+..|++.|++++...+.+|+||+|+||++.|++....+        ....+...+.  .....++++
T Consensus       169 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (313)
T PRK05854        169 YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVES  248 (313)
T ss_pred             CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHH
Confidence            778889999999999999999987543322399999999999999874321        1111212111  123578999


Q ss_pred             HHHHHHHHhcCCCccCCCceeeccCccC---------CCCccccCHHHHHHHHHHHHHHHHh
Q 023054          230 GAATTCYVALHPNLKGVTGKYFLDCNEM---------PPSALARDETLAKKLWDFSNKMINS  282 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  282 (288)
                      .|...++++.++..  .+|.||.+++..         .......|++.++++|++|+++++.
T Consensus       249 ga~~~l~~a~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lw~~s~~~~~~  308 (313)
T PRK05854        249 AILPALYAATSPDA--EGGAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQLTGV  308 (313)
T ss_pred             HHHHhhheeeCCCC--CCCcEECCCcccccCCCcccCCCCcccCCHHHHHHHHHHHHHHHCC
Confidence            99999999975543  369999876422         2233457899999999999999873

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=4.1e-42  Score=275.64  Aligned_cols=225  Identities=26%  Similarity=0.295  Sum_probs=194.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|||||+|||.++|+.|+++|++|++++|+.++++++.+++..    ..+..+..|++|.++++++++.+.+.++++|+|
T Consensus        10 lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiL   85 (246)
T COG4221          10 LITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEEFGRIDIL   85 (246)
T ss_pred             EEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHhhCcccEE
Confidence            6999999999999999999999999999999999999998843    568999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++++++|+.|.++.+++++|.|.+++     .|.|||+||+++..+              
T Consensus        86 vNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-----~G~IiN~~SiAG~~~--------------  146 (246)
T COG4221          86 VNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-----SGHIINLGSIAGRYP--------------  146 (246)
T ss_pred             EecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-----CceEEEecccccccc--------------
Confidence            999998754  33678899999999999999999999999999987     689999999999885              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH---HHHHHHHHhhhcCChHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV---MRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                       |++...||++|+++..|+..|+.++..++  |||.+|+||.+.|..+......   .+..+........+|+|+|+.++
T Consensus       147 -y~~~~vY~ATK~aV~~fs~~LR~e~~g~~--IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~  223 (246)
T COG4221         147 -YPGGAVYGATKAAVRAFSLGLRQELAGTG--IRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVL  223 (246)
T ss_pred             -CCCCccchhhHHHHHHHHHHHHHHhcCCC--eeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHH
Confidence             88889999999999999999999999888  9999999999977655544222   22333334555679999999999


Q ss_pred             HHhcCCCccCCCceee
Q 023054          236 YVALHPNLKGVTGKYF  251 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~  251 (288)
                      |.++.|..-.++--.+
T Consensus       224 ~~~~~P~~vnI~ei~i  239 (246)
T COG4221         224 FAATQPQHVNINEIEI  239 (246)
T ss_pred             HHHhCCCccccceEEE
Confidence            9998665544444333

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-43  Score=301.44  Aligned_cols=263  Identities=16%  Similarity=0.178  Sum_probs=211.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh----------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM----------AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |||||++|||+++|+.|+++|++|++++|+.          +.++++.+++...  +.++.++++|++|+++++++++++
T Consensus        12 lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   89 (305)
T PRK08303         12 LVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPEQVRALVERI   89 (305)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            6999999999999999999999999999984          3455555666443  456888999999999999999999


Q ss_pred             HhcCCCcceEEEcc-ccC------CCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           71 IALNLPLNILINNA-GIM------FCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        71 ~~~~~~id~lv~~a-g~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                      .+.++++|+||||| |..      .+..+.+.++|++.+++|+.+++.++++++|+|.++.     +|+||++||..+..
T Consensus        90 ~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-----~g~IV~isS~~~~~  164 (305)
T PRK08303         90 DREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-----GGLVVEITDGTAEY  164 (305)
T ss_pred             HHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-----CcEEEEECCccccc
Confidence            99999999999999 752      1223556678999999999999999999999997654     58999999976543


Q ss_pred             cccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-----hHHHHHHHH
Q 023054          144 TYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-----AVVMRFLKF  218 (288)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~  218 (288)
                      ..            .+.+....|++||+|+.+|+++|+.++++.|  |+||+|+||+++|+|....     .........
T Consensus       165 ~~------------~~~~~~~~Y~asKaal~~lt~~La~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  230 (305)
T PRK08303        165 NA------------THYRLSVFYDLAKTSVNRLAFSLAHELAPHG--ATAVALTPGWLRSEMMLDAFGVTEENWRDALAK  230 (305)
T ss_pred             cC------------cCCCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEecCCccccHHHHHhhccCccchhhhhcc
Confidence            10            0123456799999999999999999999999  9999999999999985321     000111112


Q ss_pred             HH-hhhcCChHHHHHHHHHHhcCCCccCCCceeeccCccCCCCccccCHHHHHHHHHHHHHHHHhhh
Q 023054          219 FS-FFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKMINSAS  284 (288)
Q Consensus       219 ~~-~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (288)
                      .+ ..+..+|+++|+.++||++.+...++||++|.++.........++++.+..+|++++++-...+
T Consensus       231 ~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (305)
T PRK08303        231 EPHFAISETPRYVGRAVAALAADPDVARWNGQSLSSGQLARVYGFTDLDGSRPDAWRYLVEVQDAGK  297 (305)
T ss_pred             ccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEEhHHHHHhcCccCCCCCCCcchhhhhhccccCC
Confidence            33 2445689999999999998333568999999999988888899999999999999998765443

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-41  Score=286.74  Aligned_cols=231  Identities=21%  Similarity=0.206  Sum_probs=195.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|+++++++++++. .++++|++
T Consensus        12 lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~l   89 (263)
T PRK08339         12 FTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK-NIGEPDIF   89 (263)
T ss_pred             EEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEE
Confidence            699999999999999999999999999999998888887776543 4568899999999999999999986 47899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++.+++|+.+++.++++++|+|.+++     .|+||++||..+..+              
T Consensus        90 v~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-----~g~Ii~isS~~~~~~--------------  150 (263)
T PRK08339         90 FFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-----FGRIIYSTSVAIKEP--------------  150 (263)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEEcCccccCC--------------
Confidence            999997643  23677899999999999999999999999998764     589999999987652              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------------HHHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------------VVMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~~~~  225 (288)
                       .+....|+++|+|+.+|+++++.|++++|  ||||+|+||+++|++.....             ......+..|..++.
T Consensus       151 -~~~~~~y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  227 (263)
T PRK08339        151 -IPNIALSNVVRISMAGLVRTLAKELGPKG--ITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLG  227 (263)
T ss_pred             -CCcchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCc
Confidence             55667899999999999999999999999  99999999999999754210             011122334566778


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+|+|+.++||++ +.+.++||+.+. ++|.
T Consensus       228 ~p~dva~~v~fL~s-~~~~~itG~~~~vdgG~  258 (263)
T PRK08339        228 EPEEIGYLVAFLAS-DLGSYINGAMIPVDGGR  258 (263)
T ss_pred             CHHHHHHHHHHHhc-chhcCccCceEEECCCc
Confidence            99999999999997 788999999887 4443

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-40  Score=284.31  Aligned_cols=273  Identities=35%  Similarity=0.517  Sum_probs=217.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+..++..+++....++.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        20 lItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   99 (306)
T PRK06197         20 VVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLL   99 (306)
T ss_pred             EEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEE
Confidence            69999999999999999999999999999998888777777655445678999999999999999999999999999999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||+..+....+.++++..+++|+.+++.+++.++|.|.+..     .++||++||..+...  ....+.++.....+
T Consensus       100 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-----~~~iV~vSS~~~~~~--~~~~~~~~~~~~~~  172 (306)
T PRK06197        100 INNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-----GSRVVTVSSGGHRIR--AAIHFDDLQWERRY  172 (306)
T ss_pred             EECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-----CCEEEEECCHHHhcc--CCCCccccCcccCC
Confidence            99999876555667789999999999999999999999998754     579999999876542  11223333334456


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH-HHHHHHHHhhhcCChHHHHHHHHHHhc
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV-MRFLKFFSFFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~l~~  239 (288)
                      ++...|+.||++++.|++.++++++..+.+|.+++++||++.|++....+.. ..+...+......+|++.+..+++++.
T Consensus       173 ~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  252 (306)
T PRK06197        173 NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGALPTLRAAT  252 (306)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHHHHHHhc
Confidence            6778999999999999999999999888444555668999999998765322 112222222345788899999999986


Q ss_pred             CCCccCCCceeeccCccC---------CCCccccCHHHHHHHHHHHHHHHHh
Q 023054          240 HPNLKGVTGKYFLDCNEM---------PPSALARDETLAKKLWDFSNKMINS  282 (288)
Q Consensus       240 ~~~~~~~tG~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  282 (288)
                        .+...+|.||.+++..         ..++...|++.++++|++|+++++.
T Consensus       253 --~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  302 (306)
T PRK06197        253 --DPAVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEELTGV  302 (306)
T ss_pred             --CCCcCCCeEEccCcccccCCCCccCCCccccCCHHHHHHHHHHHHHHHCC
Confidence              4455689999765432         2334567999999999999999873

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.7e-41  Score=278.67  Aligned_cols=219  Identities=21%  Similarity=0.250  Sum_probs=194.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||||||+|||+++|+.|+++|++|++++|++++++++.++++.++ +..+.++.+|+++++++..+.+++.+....||+|
T Consensus        10 lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvL   88 (265)
T COG0300          10 LITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKERGGPIDVL   88 (265)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhcCCcccEE
Confidence            699999999999999999999999999999999999999999886 6789999999999999999999999998899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++.++++++|+.+...|+++++|.|.+++     .|.||||+|.++..+              
T Consensus        89 VNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-----~G~IiNI~S~ag~~p--------------  149 (265)
T COG0300          89 VNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-----AGHIINIGSAAGLIP--------------  149 (265)
T ss_pred             EECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CceEEEEechhhcCC--------------
Confidence            999998755  35788899999999999999999999999999976     799999999999875              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .+....|++||+++.+|+++|+.|+...|  |+|.+|+||++.|++.+..  ........+...+.+|+++|+..++.+
T Consensus       150 -~p~~avY~ATKa~v~~fSeaL~~EL~~~g--V~V~~v~PG~~~T~f~~~~--~~~~~~~~~~~~~~~~~~va~~~~~~l  224 (265)
T COG0300         150 -TPYMAVYSATKAFVLSFSEALREELKGTG--VKVTAVCPGPTRTEFFDAK--GSDVYLLSPGELVLSPEDVAEAALKAL  224 (265)
T ss_pred             -CcchHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEEecCcccccccccc--ccccccccchhhccCHHHHHHHHHHHH
Confidence             57778999999999999999999999999  9999999999999999611  111222234566789999999999999


Q ss_pred             cCCCcc
Q 023054          239 LHPNLK  244 (288)
Q Consensus       239 ~~~~~~  244 (288)
                      ......
T Consensus       225 ~~~k~~  230 (265)
T COG0300         225 EKGKRE  230 (265)
T ss_pred             hcCCce
Confidence            643333

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=5.3e-40  Score=284.70  Aligned_cols=272  Identities=29%  Similarity=0.452  Sum_probs=212.6

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++| ++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            799999999999999999999 99999999998887777766432  456888999999999999999999988889999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc-----cCCccc
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY-----KGGIRF  151 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----~~~~~~  151 (288)
                      ||||||+..+   ..+.+.++|++++++|+.+++.+++.++|.|.+++.   .+|+||++||..+....     ++...+
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~---~~g~IV~vsS~~~~~~~~~~~~~~~~~~  155 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY---PSKRLIIVGSITGNTNTLAGNVPPKANL  155 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC---CCCEEEEEeccccccccccccCCCccch
Confidence            9999998643   235677899999999999999999999999986520   03799999998775321     000011


Q ss_pred             cCCC---------------CCCCCCccccchhhHHHHHHHHHHHHHHhcc-cCCceEEEEeeCCcc-cCCCCCCChHH-H
Q 023054          152 QKIN---------------DRAGYSDKKAYGQSKLANILHANELSRRFQE-EGVNITANSVHPGLI-MTNLFKHSAVV-M  213 (288)
Q Consensus       152 ~~~~---------------~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~~~~i~v~~v~PG~v-~t~~~~~~~~~-~  213 (288)
                      .++.               ....+.+..+|++||+|+..+++.+++++.. +|  |+||+|+||+| .|+|....... .
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~~~~~~~~  233 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETG--ITFASLYPGCIATTGLFREHIPLFR  233 (308)
T ss_pred             hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCccccccccHHHH
Confidence            1100               1123456788999999999999999999975 57  99999999999 78987643111 1


Q ss_pred             H---HHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeeccCcc-----CCCCccccCHHHHHHHHHHHHHHH
Q 023054          214 R---FLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNE-----MPPSALARDETLAKKLWDFSNKMI  280 (288)
Q Consensus       214 ~---~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  280 (288)
                      .   .....+.....+|++.|+.++++++ +.....+|.||..++.     ...++.+.|.+.++++|++|++++
T Consensus       234 ~~~~~~~~~~~~~~~~pe~~a~~~~~l~~-~~~~~~~G~~~~~~g~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~  307 (308)
T PLN00015        234 LLFPPFQKYITKGYVSEEEAGKRLAQVVS-DPSLTKSGVYWSWNGGSASFENQLSQEASDAEKAKKVWEISEKLV  307 (308)
T ss_pred             HHHHHHHHHHhcccccHHHhhhhhhhhcc-ccccCCCccccccCCcccccccCcChhhcCHHHHHHHHHHHHHhc
Confidence            1   1122333446799999999999997 5556789999975432     456777889999999999999986

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-39  Score=283.81  Aligned_cols=265  Identities=41%  Similarity=0.585  Sum_probs=213.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+..++..+++.      .+.++.+|++|.++++++++++.+.++++|+|
T Consensus        30 lITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l  103 (315)
T PRK06196         30 IVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDSGRRIDIL  103 (315)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            699999999999999999999999999999888777666552      37889999999999999999999988999999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||+.......+.++++..+++|+.+++.+++.++|.|.++.     .++||++||..+...   ...+.+.+...++
T Consensus       104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-----~~~iV~vSS~~~~~~---~~~~~~~~~~~~~  175 (315)
T PRK06196        104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-----GARVVALSSAGHRRS---PIRWDDPHFTRGY  175 (315)
T ss_pred             EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCeEEEECCHHhccC---CCCccccCccCCC
Confidence            99999875545567788999999999999999999999998754     479999999865432   1222222223456


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHH----HHHH--HHh-hhcCChHHHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR----FLKF--FSF-FLWKNVPQGAAT  233 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~----~~~~--~~~-~~~~~~~~~a~~  233 (288)
                      ++...|+.||+++..+++.+++++...|  |+||+|+||++.|++.........    +...  .+. ....+|+++|..
T Consensus       176 ~~~~~Y~~SK~a~~~~~~~la~~~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  253 (315)
T PRK06196        176 DKWLAYGQSKTANALFAVHLDKLGKDQG--VRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAAT  253 (315)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHH
Confidence            6778899999999999999999999888  999999999999998765421111    1110  111 145799999999


Q ss_pred             HHHHhcCCCccCCCceeeccCccCC----------CCccccCHHHHHHHHHHHHHHHH
Q 023054          234 TCYVALHPNLKGVTGKYFLDCNEMP----------PSALARDETLAKKLWDFSNKMIN  281 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  281 (288)
                      ++|+++.+......|.|+.++....          ..+...|.+.+++||++|+++++
T Consensus       254 ~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~~~~  311 (315)
T PRK06196        254 QVWAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAALTG  311 (315)
T ss_pred             HHHHhcCCccCCCCCeEeCCCcccccCCcccccCCCCcccCCHHHHHHHHHHHHHHHC
Confidence            9999986666666788887765432          24557799999999999999986

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-40  Score=283.77  Aligned_cols=229  Identities=14%  Similarity=0.110  Sum_probs=187.3

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++  |||+++|++|+++|++|++++|+....+. .+++.... +. ..++++|++|.++++++++++.+.++++|
T Consensus        11 lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g~-~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   87 (271)
T PRK06505         11 LIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL-GS-DFVLPCDVEDIASVDAVFEALEKKWGKLD   87 (271)
T ss_pred             EEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-CC-ceEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            6999997  99999999999999999999998654333 33333322 22 35789999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+...      ..+.+.++|++.+++|+.+++.++++++|+|.+       +|+||++||..+..+        
T Consensus        88 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-------~G~Iv~isS~~~~~~--------  152 (271)
T PRK06505         88 FVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-------GGSMLTLTYGGSTRV--------  152 (271)
T ss_pred             EEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-------CceEEEEcCCCcccc--------
Confidence            99999998642      235778899999999999999999999999963       479999999887652        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HHHHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~  228 (288)
                             .+....|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++......    .....+..|..++.+|+
T Consensus       153 -------~~~~~~Y~asKaAl~~l~r~la~el~~~g--IrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  223 (271)
T PRK06505        153 -------MPNYNVMGVAKAALEASVRYLAADYGPQG--IRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTID  223 (271)
T ss_pred             -------CCccchhhhhHHHHHHHHHHHHHHHhhcC--eEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHH
Confidence                   55667899999999999999999999999  999999999999998643211    11122233555677999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+|+.++||++ +.+.++||+.+. |+|+.
T Consensus       224 eva~~~~fL~s-~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        224 EVGGSALYLLS-DLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             HHHHHHHHHhC-ccccccCceEEeecCCcc
Confidence            99999999997 788999999887 55543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.1e-41  Score=281.63  Aligned_cols=225  Identities=16%  Similarity=0.117  Sum_probs=187.8

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|++|+++|++|++++|+. +.++..+++.    ..++.+++||++|.++++++++++.+.++++|
T Consensus        11 lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   85 (252)
T PRK06079         11 VVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATIKERVGKID   85 (252)
T ss_pred             EEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            699999  8999999999999999999999984 3443333332    24578899999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+..+      ..+.+.++|+..+++|+.+++.+++.++|+|.+       +|+||++||..+..+        
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~~--------  150 (252)
T PRK06079         86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-------GASIVTLTYFGSERA--------  150 (252)
T ss_pred             EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-------CceEEEEeccCcccc--------
Confidence            99999998642      235677889999999999999999999999964       479999999887653        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~  228 (288)
                             .+....|++||+|+.+|+++++.|++++|  |+||+|+||+++|++.....    .........+..++.+|+
T Consensus       151 -------~~~~~~Y~asKaal~~l~~~la~el~~~g--I~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  221 (252)
T PRK06079        151 -------IPNYNVMGIAKAALESSVRYLARDLGKKG--IRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIE  221 (252)
T ss_pred             -------CCcchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHH
Confidence                   55678899999999999999999999999  99999999999999864321    111222334556778999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |+|+.++||++ +.+.+++|+.+. ++|
T Consensus       222 dva~~~~~l~s-~~~~~itG~~i~vdgg  248 (252)
T PRK06079        222 EVGNTAAFLLS-DLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHHHHHHHHhC-cccccccccEEEeCCc
Confidence            99999999997 789999999887 444

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-40  Score=283.87  Aligned_cols=229  Identities=17%  Similarity=0.138  Sum_probs=186.7

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|+.|+++|++|++++|+.+ .++..+++..+. +.. .++++|++|.++++++++++.+.++++|
T Consensus         9 lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iD   85 (274)
T PRK08415          9 LIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQEL-GSD-YVYELDVSKPEHFKSLAESLKKDLGKID   85 (274)
T ss_pred             EEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhc-CCc-eEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            699997  89999999999999999999999863 223334443332 223 6789999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+..+      ..+.+.++|++++++|+.+++++++.++|.|.+       .|+||++||..+..+        
T Consensus        86 ilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-------~g~Iv~isS~~~~~~--------  150 (274)
T PRK08415         86 FIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-------GASVLTLSYLGGVKY--------  150 (274)
T ss_pred             EEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-------CCcEEEEecCCCccC--------
Confidence            99999998532      236677899999999999999999999999965       479999999876642        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH---HH-HHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM---RF-LKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~---~~-~~~~~~~~~~~~~  228 (288)
                             .+....|++||+|+.+|+++++.+++++|  |+||+|+||+++|++........   .+ ....|..++.+|+
T Consensus       151 -------~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pe  221 (274)
T PRK08415        151 -------VPHYNVMGVAKAALESSVRYLAVDLGKKG--IRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIE  221 (274)
T ss_pred             -------CCcchhhhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHH
Confidence                   45667899999999999999999999999  99999999999998754321111   11 1234556778999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+|+.++||++ +.+.++||+.+. ++|+.
T Consensus       222 dva~~v~fL~s-~~~~~itG~~i~vdGG~~  250 (274)
T PRK08415        222 EVGNSGMYLLS-DLSSGVTGEIHYVDAGYN  250 (274)
T ss_pred             HHHHHHHHHhh-hhhhcccccEEEEcCccc
Confidence            99999999997 788999999777 56653

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-40  Score=279.31  Aligned_cols=233  Identities=23%  Similarity=0.258  Sum_probs=198.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.+++..+++...+.+.++.++.+|++|++++.++++++.+.++++|+|
T Consensus        11 lVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   90 (260)
T PRK07063         11 LVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVL   90 (260)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEE
Confidence            69999999999999999999999999999999988888888664345678999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++++++|+.+++.++++++|.|.++.     .++||++||..+..+              
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  151 (260)
T PRK07063         91 VNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-----RGSIVNIASTHAFKI--------------  151 (260)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-----CeEEEEECChhhccC--------------
Confidence            999997543  23566788999999999999999999999998754     589999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-----h---HHHHHHHHHHhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-----A---VVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~  230 (288)
                       .++..+|++||+|+.+++++++.+++++|  |+||+|+||+++|++....     .   .........+..++.+|+|+
T Consensus       152 -~~~~~~Y~~sKaa~~~~~~~la~el~~~g--Irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~v  228 (260)
T PRK07063        152 -IPGCFPYPVAKHGLLGLTRALGIEYAARN--VRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEV  228 (260)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHH
Confidence             55667899999999999999999999998  9999999999999986432     0   11112233456677899999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+.++||++ +...++||+.+. |+|.
T Consensus       229 a~~~~fl~s-~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        229 AMTAVFLAS-DEAPFINATCITIDGGR  254 (260)
T ss_pred             HHHHHHHcC-ccccccCCcEEEECCCe
Confidence            999999997 788899999877 5543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-40  Score=277.27  Aligned_cols=230  Identities=19%  Similarity=0.216  Sum_probs=191.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+..  ++..+++...  +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus        12 lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~l   87 (251)
T PRK12481         12 IITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVEVMGHIDIL   87 (251)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999998753  2333444333  4578899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++++++|+.+++.++++++|+|.+++.    +|+||++||..+..+              
T Consensus        88 v~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~----~g~ii~isS~~~~~~--------------  149 (251)
T PRK12481         88 INNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGN----GGKIINIASMLSFQG--------------  149 (251)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC----CCEEEEeCChhhcCC--------------
Confidence            999998654  235677899999999999999999999999976421    479999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .+....|++||+|+++|+++++.+++++|  |+||+|+||+++|++.....    ........+|..++.+|+|+|+.+
T Consensus       150 -~~~~~~Y~asK~a~~~l~~~la~e~~~~g--irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~  226 (251)
T PRK12481        150 -GIRVPSYTASKSAVMGLTRALATELSQYN--INVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPA  226 (251)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             44567899999999999999999999999  99999999999999865431    111233345666778999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +.+.+++|+.+. ++|+
T Consensus       227 ~~L~s-~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        227 IFLSS-SASDYVTGYTLAVDGGW  248 (251)
T ss_pred             HHHhC-ccccCcCCceEEECCCE
Confidence            99997 788999999887 4443

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.6e-40  Score=278.56  Aligned_cols=228  Identities=16%  Similarity=0.131  Sum_probs=187.0

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++  |||+++|+.|+++|++|++++|+. ..++..+++.... +. ..++++|++|+++++++++.+.+.++++|
T Consensus        12 lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   88 (260)
T PRK06603         12 LITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-GC-NFVSELDVTNPKSISNLFDDIKEKWGSFD   88 (260)
T ss_pred             EEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-CC-ceEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            6999997  999999999999999999999884 3344455554432 22 34678999999999999999999999999


Q ss_pred             eEEEccccCC------CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMF------CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+..      +..+.+.++|++.+++|+.+++.+++.++|+|.+       +|+||++||..+..         
T Consensus        89 ilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~---------  152 (260)
T PRK06603         89 FLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD-------GGSIVTLTYYGAEK---------  152 (260)
T ss_pred             EEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------CceEEEEecCcccc---------
Confidence            9999999753      2235677899999999999999999999999954       47999999987654         


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~  228 (288)
                            +.+....|++||+|+.+|+++++.|++++|  |+||+|+||+++|++.....    .........|..++.+|+
T Consensus       153 ------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  224 (260)
T PRK06603        153 ------VIPNYNVMGVAKAALEASVKYLANDMGENN--IRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQE  224 (260)
T ss_pred             ------CCCcccchhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHH
Confidence                  256678899999999999999999999999  99999999999999754221    111222234556678999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+.++||++ +.+.++||+.+. |+|+
T Consensus       225 dva~~~~~L~s-~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        225 DVGGAAVYLFS-ELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHHHHHHHHhC-cccccCcceEEEeCCcc
Confidence            99999999997 788999999877 5554

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.7e-40  Score=280.37  Aligned_cols=247  Identities=25%  Similarity=0.298  Sum_probs=203.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+ +.+++..+++...  +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus        10 lItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   86 (272)
T PRK08589         10 VITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVL   86 (272)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEE
Confidence            699999999999999999999999999999 7777777777554  4578999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.+.|++++++|+.+++.+++.++|+|.++      +|+||++||..+..+             
T Consensus        87 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~-------------  147 (272)
T PRK08589         87 FNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ------GGSIINTSSFSGQAA-------------  147 (272)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEeCchhhcCC-------------
Confidence            999998643   2355677899999999999999999999999764      479999999987653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--H----HHHH----HHHHhhhcCCh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--V----MRFL----KFFSFFLWKNV  227 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~----~~~~----~~~~~~~~~~~  227 (288)
                        .+....|++||+|+++|+++++.+++++|  |+||+|+||+++|++......  .    ..+.    ...+..++.+|
T Consensus       148 --~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (272)
T PRK08589        148 --DLYRSGYNAAKGAVINFTKSIAIEYGRDG--IRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKP  223 (272)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCH
Confidence              45567899999999999999999999998  999999999999998654210  0    0011    11244456789


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCccCCCCccccCHHHHHHHHHHH
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNEMPPSALARDETLAKKLWDFS  276 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  276 (288)
                      +++|+.++||++ +...+++|+.+. +++....  .+.+.-+.+..|+.|
T Consensus       224 ~~va~~~~~l~s-~~~~~~~G~~i~vdgg~~~~--~~~~~~~~~~~~~~~  270 (272)
T PRK08589        224 EEVAKLVVFLAS-DDSSFITGETIRIDGGVMAY--TWPGEMLSDDSWKRT  270 (272)
T ss_pred             HHHHHHHHHHcC-chhcCcCCCEEEECCCcccC--CCCCcccccchhhhh
Confidence            999999999997 778899999887 5554432  334666778888766

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-40  Score=276.05  Aligned_cols=234  Identities=22%  Similarity=0.223  Sum_probs=196.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.+.++++|+|
T Consensus        13 lVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   90 (253)
T PRK05867         13 LITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIA   90 (253)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999999888888877654  3568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.++..    +++||++||..+....             
T Consensus        91 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~g~iv~~sS~~~~~~~-------------  153 (253)
T PRK05867         91 VCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ----GGVIINTASMSGHIIN-------------  153 (253)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC----CcEEEEECcHHhcCCC-------------
Confidence            999998643  235677889999999999999999999999976431    4789999998765320             


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH-HHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV-MRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                      .......|++||+|+++|+++++++++++|  |+||+|+||+++|++....... ..+.+..+..++.+|+|+|+.++||
T Consensus       154 ~~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L  231 (253)
T PRK05867        154 VPQQVSHYCASKAAVIHLTKAMAVELAPHK--IRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYL  231 (253)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHHhHhC--eEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            012346899999999999999999999999  9999999999999987654221 2233334556778999999999999


Q ss_pred             hcCCCccCCCceeec-cCcc
Q 023054          238 ALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++ +...++||+.+. |+|+
T Consensus       232 ~s-~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        232 AS-EASSYMTGSDIVIDGGY  250 (253)
T ss_pred             cC-cccCCcCCCeEEECCCc
Confidence            97 789999999887 5554

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.6e-40  Score=278.24  Aligned_cols=229  Identities=16%  Similarity=0.089  Sum_probs=188.1

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMA--AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++...  ..++.++.+|++|.++++++++.+.+.+++
T Consensus        10 lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~   87 (258)
T PRK07370         10 LVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFETIKQKWGK   87 (258)
T ss_pred             EEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHHHHHHHcCC
Confidence            699986  89999999999999999999876543  334455555443  234678899999999999999999999999


Q ss_pred             cceEEEccccCC------CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcc
Q 023054           77 LNILINNAGIMF------CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIR  150 (288)
Q Consensus        77 id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  150 (288)
                      +|+||||||+..      +..+.+.++|++.+++|+.+++.+++.++|.|.+       .|+||++||..+..+      
T Consensus        88 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~~------  154 (258)
T PRK07370         88 LDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-------GGSIVTLTYLGGVRA------  154 (258)
T ss_pred             CCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-------CCeEEEEeccccccC------
Confidence            999999999753      2336677899999999999999999999999965       479999999887652      


Q ss_pred             ccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCC
Q 023054          151 FQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKN  226 (288)
Q Consensus       151 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~  226 (288)
                               .+....|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++....    ..........+..++.+
T Consensus       155 ---------~~~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~  223 (258)
T PRK07370        155 ---------IPNYNVMGVAKAALEASVRYLAAELGPKN--IRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVT  223 (258)
T ss_pred             ---------CcccchhhHHHHHHHHHHHHHHHHhCcCC--eEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCC
Confidence                     56678899999999999999999999999  9999999999999976432    11112222335566789


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+|+.++||++ +...++||+.+. |+|+
T Consensus       224 ~~dva~~~~fl~s-~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        224 QTEVGNTAAFLLS-DLASGITGQTIYVDAGY  253 (258)
T ss_pred             HHHHHHHHHHHhC-hhhccccCcEEEECCcc
Confidence            9999999999997 888999999776 5543

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.4e-40  Score=276.78  Aligned_cols=229  Identities=15%  Similarity=0.087  Sum_probs=186.8

Q ss_pred             CcccC--CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGG--ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGa--s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||  ++|||+++|+.|+++|++|++++|+. +.++..+++....  .....++||++|.++++++++++.+.++++|
T Consensus        10 lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   86 (261)
T PRK08690         10 LITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGKHWDGLD   86 (261)
T ss_pred             EEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence            69997  67999999999999999999998864 3334444454432  2346789999999999999999999999999


Q ss_pred             eEEEccccCCCC-------CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           79 ILINNAGIMFCP-------YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        79 ~lv~~ag~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      +||||||+....       .+.+.++|+..+++|+.+++.+++.++|+|.++      .|+||++||..+..+       
T Consensus        87 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~------~g~Iv~iss~~~~~~-------  153 (261)
T PRK08690         87 GLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR------NSAIVALSYLGAVRA-------  153 (261)
T ss_pred             EEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc------CcEEEEEcccccccC-------
Confidence            999999986431       234567899999999999999999999998653      479999999887652       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~  227 (288)
                              .++...|++||+|+.+|++.++.+++++|  |+||+|+||+++|++.....    ....+.+..|..++.+|
T Consensus       154 --------~~~~~~Y~asKaal~~l~~~la~e~~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p  223 (261)
T PRK08690        154 --------IPNYNVMGMAKASLEAGIRFTAACLGKEG--IRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTI  223 (261)
T ss_pred             --------CCCcccchhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCH
Confidence                    56678899999999999999999999999  99999999999999865321    11122233456677899


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+|+.++||++ +.+.++||+.|. |+|.
T Consensus       224 eevA~~v~~l~s-~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        224 EEVGNTAAFLLS-DLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHHHHHhC-cccCCcceeEEEEcCCc
Confidence            999999999997 788999999887 5544

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.6e-40  Score=273.34  Aligned_cols=188  Identities=29%  Similarity=0.342  Sum_probs=171.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|||||+|||.++|++|+++|++++++.|+.++++++.+++++..+..++++++||++|+++++++++++...+|++|+|
T Consensus        16 vITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvL   95 (282)
T KOG1205|consen   16 LITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVL   95 (282)
T ss_pred             EEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999999998999887765579999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  ...+.+++...|++|++|+..++++++|+|++++     .|+||++||++|..+              
T Consensus        96 VNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-----~GhIVvisSiaG~~~--------------  156 (282)
T KOG1205|consen   96 VNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-----DGHIVVISSIAGKMP--------------  156 (282)
T ss_pred             EecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-----CCeEEEEeccccccC--------------
Confidence            9999998642  2556678888999999999999999999999875     599999999999885              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS  209 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~  209 (288)
                       +|....|++||+|+.+|+.+|+.|+...+.+|++ +|+||+|+|++....
T Consensus       157 -~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  157 -LPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             -CCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence             6666799999999999999999999998866777 999999999987644

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=3.5e-40  Score=276.30  Aligned_cols=225  Identities=29%  Similarity=0.337  Sum_probs=195.3

Q ss_pred             cCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-CCcceE
Q 023054            4 GGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-LPLNIL   80 (288)
Q Consensus         4 Gas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~l   80 (288)
                      |++  +|||+++|+.|+++|++|++++|+.+++++..+++.++++ .+  ++.+|++++++++++++++.+.+ +++|+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  9999999999999999999999999998888888877754 33  59999999999999999999998 999999


Q ss_pred             EEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           81 INNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        81 v~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      |||+|...+      ..+.+.++|+..+++|+.+++.+++++.|+|.+       .|+||++||..+..+          
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~gsii~iss~~~~~~----------  140 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK-------GGSIINISSIAAQRP----------  140 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-------EEEEEEEEEGGGTSB----------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCCcccccchhhccc----------
Confidence            999998654      125567899999999999999999999998877       479999999987663          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcc-cCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHH
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQE-EGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~  229 (288)
                           .++...|+++|+|+++|+++++.+|++ +|  ||||+|+||++.|++.....    ......+..|..+..+|+|
T Consensus       141 -----~~~~~~y~~sKaal~~l~r~lA~el~~~~g--IrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~e  213 (241)
T PF13561_consen  141 -----MPGYSAYSASKAALEGLTRSLAKELAPKKG--IRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEE  213 (241)
T ss_dssp             -----STTTHHHHHHHHHHHHHHHHHHHHHGGHGT--EEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHH
T ss_pred             -----CccchhhHHHHHHHHHHHHHHHHHhccccC--eeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHH
Confidence                 566779999999999999999999999 99  99999999999999855332    2233445567788789999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+.++||++ +.++++||+.|. |+|+
T Consensus       214 vA~~v~fL~s-~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  214 VANAVLFLAS-DAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHHS-GGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHHhC-ccccCccCCeEEECCCc
Confidence            9999999997 899999999887 5554

...

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-39  Score=275.86  Aligned_cols=227  Identities=16%  Similarity=0.120  Sum_probs=185.5

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNM---AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||+  +|||+++|+.|+++|++|++++|+.   +.++++.+++    .+.++.++++|++|.++++++++++.+.++
T Consensus        11 lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (257)
T PRK08594         11 VVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL----EGQESLLLPCDVTSDEEITACFETIKEEVG   86 (257)
T ss_pred             EEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc----CCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence            699997  8999999999999999999998764   3333333332    245688999999999999999999999999


Q ss_pred             CcceEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc
Q 023054           76 PLNILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI  149 (288)
Q Consensus        76 ~id~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  149 (288)
                      ++|++|||||+...      ..+.+.++|+..+++|+.+++.+++.++|+|.+       +|+||++||..+..+     
T Consensus        87 ~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~~-----  154 (257)
T PRK08594         87 VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-------GGSIVTLTYLGGERV-----  154 (257)
T ss_pred             CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-------CceEEEEcccCCccC-----
Confidence            99999999997531      235677889999999999999999999999954       479999999987653     


Q ss_pred             cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcC
Q 023054          150 RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWK  225 (288)
Q Consensus       150 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~  225 (288)
                                .+....|++||+|+.+|+++++.+++++|  |+||+|+||+++|++.....    .........+..++.
T Consensus       155 ----------~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~  222 (257)
T PRK08594        155 ----------VQNYNVMGVAKASLEASVKYLANDLGKDG--IRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTT  222 (257)
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHhhhcC--CEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccC
Confidence                      45667899999999999999999999999  99999999999999754221    111112223455678


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+|+|+.++||++ +.+.++||+.+. ++|.
T Consensus       223 ~p~~va~~~~~l~s-~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        223 TQEEVGDTAAFLFS-DLSRGVTGENIHVDSGY  253 (257)
T ss_pred             CHHHHHHHHHHHcC-cccccccceEEEECCch
Confidence            99999999999997 788999999776 5543

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-39  Score=271.97  Aligned_cols=232  Identities=24%  Similarity=0.249  Sum_probs=195.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|++++++++.+++...  +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus        10 lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   87 (254)
T PRK07478         10 IITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVERFGGLDIA   87 (254)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999888888777654  4578899999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.+++++++++|+.+++.+++.++|.|.+.+     .++||++||..+...             
T Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-----~~~iv~~sS~~~~~~-------------  149 (254)
T PRK07478         88 FNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-----GGSLIFTSTFVGHTA-------------  149 (254)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CceEEEEechHhhcc-------------
Confidence            999998532   23567788999999999999999999999998764     589999999876521             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH---HH-HHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM---RF-LKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~---~~-~~~~~~~~~~~~~~~a~~  233 (288)
                       +.++...|++||++++.++++++.+++++|  |+||+|+||+++|++........   .. ....+..++.+|+++|+.
T Consensus       150 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  226 (254)
T PRK07478        150 -GFPGMAAYAASKAGLIGLTQVLAAEYGAQG--IRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQA  226 (254)
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence             245678999999999999999999999998  99999999999999865432111   11 112244556799999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++||++ +...+++|+.+. +++.
T Consensus       227 ~~~l~s-~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        227 ALFLAS-DAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHHHcC-chhcCCCCCeEEeCCch
Confidence            999997 778899999876 4543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-39  Score=276.20  Aligned_cols=228  Identities=15%  Similarity=0.097  Sum_probs=185.1

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|+.|+++|++|++++|+... .+..+++.++.  ....++++|++|+++++++++++.+.++++|
T Consensus        14 lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   90 (272)
T PRK08159         14 LILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETLEKKWGKLD   90 (272)
T ss_pred             EEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHHHHhcCCCc
Confidence            689997  899999999999999999999887432 22333343332  2356789999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+...      ..+.+.++|++.+++|+.+++.+++.++|+|.+       +|+||++||..+..         
T Consensus        91 ~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~---------  154 (272)
T PRK08159         91 FVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-------GGSILTLTYYGAEK---------  154 (272)
T ss_pred             EEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CceEEEEecccccc---------
Confidence            99999998642      235677899999999999999999999999954       47999999987654         


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH---HH-HHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM---RF-LKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~---~~-~~~~~~~~~~~~~  228 (288)
                            +.+....|++||+|+.+|+++|+.+++++|  |+||+|+||+++|++........   .. ....|..++.+|+
T Consensus       155 ------~~p~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  226 (272)
T PRK08159        155 ------VMPHYNVMGVAKAALEASVKYLAVDLGPKN--IRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIE  226 (272)
T ss_pred             ------CCCcchhhhhHHHHHHHHHHHHHHHhcccC--eEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHH
Confidence                  256678899999999999999999999999  99999999999998764321111   11 1124555678999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+.++||++ +...++||+.|. ++|+
T Consensus       227 evA~~~~~L~s-~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        227 EVGDSALYLLS-DLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             HHHHHHHHHhC-ccccCccceEEEECCCc
Confidence            99999999997 788999999887 5554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-39  Score=274.18  Aligned_cols=227  Identities=12%  Similarity=0.132  Sum_probs=185.3

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++  |||+++|+.|+++|++|++++|+ ++.++..+++....  .++.++.||++|.++++++++++.+.++++|
T Consensus        10 lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   86 (262)
T PRK07984         10 LVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGKVWPKFD   86 (262)
T ss_pred             EEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHhhcCCCC
Confidence            6999986  99999999999999999999988 34445555565443  3467889999999999999999999999999


Q ss_pred             eEEEccccCCC-------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           79 ILINNAGIMFC-------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        79 ~lv~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      +||||||+...       ..+.+.++|++.+++|+.+++.+++.+.|++.+       +|+||++||..+..        
T Consensus        87 ~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~iss~~~~~--------  151 (262)
T PRK07984         87 GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAER--------  151 (262)
T ss_pred             EEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-------CcEEEEEecCCCCC--------
Confidence            99999997542       123566789999999999999999999987642       47999999987654        


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HHHHHHHHHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VMRFLKFFSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~  227 (288)
                             +.+....|++||+|+.+|+++++.+++++|  |+||+|+||+++|++......    ........+..++.+|
T Consensus       152 -------~~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p  222 (262)
T PRK07984        152 -------AIPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI  222 (262)
T ss_pred             -------CCCCcchhHHHHHHHHHHHHHHHHHhcccC--cEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCH
Confidence                   255677899999999999999999999999  999999999999987543211    1112223455677899


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|+|+.++||++ +...+++|+.+. +++
T Consensus       223 edva~~~~~L~s-~~~~~itG~~i~vdgg  250 (262)
T PRK07984        223 EDVGNSAAFLCS-DLSAGISGEVVHVDGG  250 (262)
T ss_pred             HHHHHHHHHHcC-cccccccCcEEEECCC
Confidence            999999999997 778999999887 444

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=2.2e-38  Score=275.12  Aligned_cols=274  Identities=31%  Similarity=0.488  Sum_probs=211.4

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++| ++|++++|+.++++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         7 lITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   84 (314)
T TIGR01289         7 IITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDA   84 (314)
T ss_pred             EEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            699999999999999999999 99999999998888777766432  456888999999999999999999888889999


Q ss_pred             EEEccccCCCC---CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc-----cCCccc
Q 023054           80 LINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY-----KGGIRF  151 (288)
Q Consensus        80 lv~~ag~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~-----~~~~~~  151 (288)
                      ||||||+..+.   ...+.++|+.++++|+.+++.+++.++|.|.+.+.   ..++||++||..+....     +...++
T Consensus        85 lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~---~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        85 LVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN---KDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             EEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC---CCCeEEEEecCccccccCCCcCCCcccc
Confidence            99999986432   24577889999999999999999999999976421   13799999999875421     001111


Q ss_pred             cCC-------------CCCCCCCccccchhhHHHHHHHHHHHHHHhc-ccCCceEEEEeeCCcc-cCCCCCCChH-HH--
Q 023054          152 QKI-------------NDRAGYSDKKAYGQSKLANILHANELSRRFQ-EEGVNITANSVHPGLI-MTNLFKHSAV-VM--  213 (288)
Q Consensus       152 ~~~-------------~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~~~i~v~~v~PG~v-~t~~~~~~~~-~~--  213 (288)
                      .++             .....+.+..+|++||+|+..+++.+++++. ..+  |+|++|+||++ .|++...... ..  
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~T~l~~~~~~~~~~~  239 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETG--ITFASLYPGCIADTGLFREHVPLFRTL  239 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCC--eEEEEecCCcccCCcccccccHHHHHH
Confidence            111             1123355778899999999999999999985 357  99999999999 6998764311 11  


Q ss_pred             -HHHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeeccCcc-----CCCCccccCHHHHHHHHHHHHHHHHh
Q 023054          214 -RFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNE-----MPPSALARDETLAKKLWDFSNKMINS  282 (288)
Q Consensus       214 -~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (288)
                       ............+|++.|+.+++++..+.. ..+|.||.+++.     ...+....|++.+++||++|+++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  313 (314)
T TIGR01289       240 FPPFQKYITKGYVSEEEAGERLAQVVSDPKL-KKSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLVGL  313 (314)
T ss_pred             HHHHHHHHhccccchhhhhhhhHHhhcCccc-CCCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHhcc
Confidence             111111122357899999999999974333 468999975442     35667788999999999999999864

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-39  Score=273.56  Aligned_cols=228  Identities=15%  Similarity=0.139  Sum_probs=185.6

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.++.  ....++.||++|.++++++++.+.+.++++|
T Consensus        14 lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld   90 (258)
T PRK07533         14 LVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEEL--DAPIFLPLDVREPGQLEAVFARIAEEWGRLD   90 (258)
T ss_pred             EEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhh--ccceEEecCcCCHHHHHHHHHHHHHHcCCCC
Confidence            699998  59999999999999999999999864322 233333322  2356789999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+...      ..+.+.++|++.+++|+.+++++++.++|+|.+       +|+||++||..+..+        
T Consensus        91 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-------~g~Ii~iss~~~~~~--------  155 (258)
T PRK07533         91 FLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-------GGSLLTMSYYGAEKV--------  155 (258)
T ss_pred             EEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-------CCEEEEEeccccccC--------
Confidence            99999998532      235677899999999999999999999999953       479999999876542        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~  228 (288)
                             .+....|++||+|+.+|+++|+.+++++|  |+||+|+||+++|++.....    .........+..+..+|+
T Consensus       156 -------~~~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  226 (258)
T PRK07533        156 -------VENYNLMGPVKAALESSVRYLAAELGPKG--IRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDID  226 (258)
T ss_pred             -------CccchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHH
Confidence                   45667899999999999999999999999  99999999999999865331    111222334555677999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+.++||++ +...++||+.+. |+++
T Consensus       227 dva~~~~~L~s-~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        227 DVGAVAAFLAS-DAARRLTGNTLYIDGGY  254 (258)
T ss_pred             HHHHHHHHHhC-hhhccccCcEEeeCCcc
Confidence            99999999997 778999999887 5543

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-39  Score=271.37  Aligned_cols=232  Identities=20%  Similarity=0.192  Sum_probs=197.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+++++..+++...+++.++.++.+|++|.+++.++++++.+.++++|+|
T Consensus        12 lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   91 (265)
T PRK07062         12 VVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDML   91 (265)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999988888888777666688999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++.+++|+.+++.+++.++|.|.+++     .|+||++||..+..+              
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  152 (265)
T PRK07062         92 VNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-----AASIVCVNSLLALQP--------------  152 (265)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-----CcEEEEeccccccCC--------------
Confidence            999998643  23566778999999999999999999999998754     589999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--------HHHHH------HHHHhhhc
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--------VMRFL------KFFSFFLW  224 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--------~~~~~------~~~~~~~~  224 (288)
                       .+....|+++|+|+.+|+++++.+++++|  |+||+|+||+++|++......        .....      ...+..++
T Consensus       153 -~~~~~~y~asKaal~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  229 (265)
T PRK07062        153 -EPHMVATSAARAGLLNLVKSLATELAPKG--VRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRL  229 (265)
T ss_pred             -CCCchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCC
Confidence             45667899999999999999999999998  999999999999998643100        01111      11344567


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      .+|+++|+.++||++ +...++||+.+. ++|
T Consensus       230 ~~p~~va~~~~~L~s-~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        230 GRPDEAARALFFLAS-PLSSYTTGSHIDVSGG  260 (265)
T ss_pred             CCHHHHHHHHHHHhC-chhcccccceEEEcCc
Confidence            799999999999997 778999999877 444

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-39  Score=270.89  Aligned_cols=231  Identities=20%  Similarity=0.192  Sum_probs=193.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+++.+++..+++...   .++.++.+|++|.++++++++++.+.++++|+|
T Consensus         4 lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          4 LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             EEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999888888877543   368899999999999999999999999999999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||....    ..+.+.++|.+.+.+|+.+++.+++.++|.|.+...    .|+||++||..+..+            
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~----~g~iv~isS~~~~~~------------  144 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM----KGVLVYLSSVSVKEP------------  144 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC----CCEEEEEeCcccCCC------------
Confidence            999997532    234566788889999999999999999998864211    589999999987642            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----------hH----HHHHHHHHHhh
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----------AV----VMRFLKFFSFF  222 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----------~~----~~~~~~~~~~~  222 (288)
                         .++...|+++|+|+.+|+++++.+++++|  |+||+|+||+++|++....          ..    ........|..
T Consensus       145 ---~~~~~~y~~sKaa~~~~~~~la~e~~~~g--I~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  219 (259)
T PRK08340        145 ---MPPLVLADVTRAGLVQLAKGVSRTYGGKG--IRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLK  219 (259)
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhCCCC--EEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCcc
Confidence               55677899999999999999999999999  9999999999999986421          00    11122334556


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++.+|+|+|+.++||++ +.++++||+.+. |+|.
T Consensus       220 r~~~p~dva~~~~fL~s-~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        220 RTGRWEELGSLIAFLLS-ENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             CCCCHHHHHHHHHHHcC-cccccccCceEeecCCc
Confidence            77899999999999997 789999999877 5543

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=269.01  Aligned_cols=233  Identities=22%  Similarity=0.215  Sum_probs=194.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+.+ .+++..+++...  +.++.++.+|++|+++++++++++.+.++++|+
T Consensus        12 lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   89 (254)
T PRK06114         12 FVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVARTEAELGALTL   89 (254)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999764 456666666554  457889999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++++++|+.+++.+++.++|.|.+++     .++||++||..+..+.+           
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~~~-----------  153 (254)
T PRK06114         90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-----GGSIVNIASMSGIIVNR-----------  153 (254)
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-----CcEEEEECchhhcCCCC-----------
Confidence            9999998643  23567789999999999999999999999997754     58999999998765311           


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---HHHHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---VMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                        ......|+++|+|+.+++++++.++..+|  |+||+|+||+++|++......   ...+....|..++.+|+|+|+.+
T Consensus       154 --~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~  229 (254)
T PRK06114        154 --GLLQAHYNASKAGVIHLSKSLAMEWVGRG--IRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPA  229 (254)
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence              11357899999999999999999999999  999999999999998653211   12233345666778999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +.++++||+.+. ++|.
T Consensus       230 ~~l~s-~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        230 VFLLS-DAASFCTGVDLLVDGGF  251 (254)
T ss_pred             HHHcC-ccccCcCCceEEECcCE
Confidence            99997 788999999877 5554

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.2e-39  Score=271.55  Aligned_cols=227  Identities=14%  Similarity=0.086  Sum_probs=181.9

Q ss_pred             CcccC--CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGG--ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGa--s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||  ++|||+++|++|+++|++|++++|..... +..+++.... + ...++++|++|+++++++++++.+.++++|
T Consensus        10 lItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~-~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   86 (260)
T PRK06997         10 LITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEF-G-SDLVFPCDVASDEQIDALFASLGQHWDGLD   86 (260)
T ss_pred             EEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH-HHHHHHHHhc-C-CcceeeccCCCHHHHHHHHHHHHHHhCCCc
Confidence            68996  68999999999999999999987653222 2223333322 1 234688999999999999999999999999


Q ss_pred             eEEEccccCCCC-------CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           79 ILINNAGIMFCP-------YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        79 ~lv~~ag~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      +||||||+....       .+.+.++|++.+++|+.+++.++++++|+|.+       .|+||++||..+..+       
T Consensus        87 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-------~g~Ii~iss~~~~~~-------  152 (260)
T PRK06997         87 GLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLGAERV-------  152 (260)
T ss_pred             EEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-------CceEEEEeccccccC-------
Confidence            999999986431       24566889999999999999999999999943       479999999887542       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~  227 (288)
                              .+....|++||+|+.+|+++++.+++++|  |+||+|+||+++|++.....    .........|..++.+|
T Consensus       153 --------~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p  222 (260)
T PRK06997        153 --------VPNYNTMGLAKASLEASVRYLAVSLGPKG--IRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTI  222 (260)
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCH
Confidence                    55667899999999999999999999999  99999999999998754321    11112223455677899


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|+|+.++||++ +.+.++||+.+. |++
T Consensus       223 edva~~~~~l~s-~~~~~itG~~i~vdgg  250 (260)
T PRK06997        223 EEVGNVAAFLLS-DLASGVTGEITHVDSG  250 (260)
T ss_pred             HHHHHHHHHHhC-ccccCcceeEEEEcCC
Confidence            999999999997 778999999887 444

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=7e-39  Score=270.00  Aligned_cols=233  Identities=26%  Similarity=0.302  Sum_probs=194.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC-CCCceEEEEecCCChHHHHHHHHHHHhc-CCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED-DTARVDTLKLDLSSIASIKDFAQNFIAL-NLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~id   78 (288)
                      |||||++|||+++|++|++.|++|++++|+++.+++....+.... .+.++..+.||+++.+++++++++..+. +|++|
T Consensus        12 lVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~Gkid   91 (270)
T KOG0725|consen   12 LVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKID   91 (270)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCC
Confidence            699999999999999999999999999999999998888877643 2567999999999999999999999988 79999


Q ss_pred             eEEEccccCCC---CCCCCCCcchhhhhhhhhH-HHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           79 ILINNAGIMFC---PYQISEDGIEMQFATNHIG-HFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        79 ~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      +||||||....   ..+.+++.|+..+++|+.| .+.+.+.+.|++.+++     +|.|+++||..+..+          
T Consensus        92 iLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-----gg~I~~~ss~~~~~~----------  156 (270)
T KOG0725|consen   92 ILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-----GGSIVNISSVAGVGP----------  156 (270)
T ss_pred             EEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-----CceEEEEeccccccC----------
Confidence            99999998764   3578899999999999995 6667777777777655     789999999987753          


Q ss_pred             CCCCCCCcc-ccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC------hHHHH---HHHHHHhhhc
Q 023054          155 NDRAGYSDK-KAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS------AVVMR---FLKFFSFFLW  224 (288)
Q Consensus       155 ~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~------~~~~~---~~~~~~~~~~  224 (288)
                           ..+. .+|+++|+|+.+|+|++|.||+++|  ||||+|.||++.|++....      .....   .....|..+.
T Consensus       157 -----~~~~~~~Y~~sK~al~~ltr~lA~El~~~g--IRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~  229 (270)
T KOG0725|consen  157 -----GPGSGVAYGVSKAALLQLTRSLAKELAKHG--IRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRV  229 (270)
T ss_pred             -----CCCCcccchhHHHHHHHHHHHHHHHHhhcC--cEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCc
Confidence                 2222 7899999999999999999999999  9999999999999982111      01111   1223478888


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ..|+|+|+.+.||++ ++.+|++|+.+. |++.
T Consensus       230 g~~~eva~~~~fla~-~~asyitG~~i~vdgG~  261 (270)
T KOG0725|consen  230 GTPEEVAEAAAFLAS-DDASYITGQTIIVDGGF  261 (270)
T ss_pred             cCHHHHHHhHHhhcC-cccccccCCEEEEeCCE
Confidence            999999999999998 555599999777 4443

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-38  Score=270.28  Aligned_cols=231  Identities=16%  Similarity=0.164  Sum_probs=191.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++| +.+.++...+++.... +.++.++.+|++|+++++++++++.+.++++|+
T Consensus        12 lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   90 (260)
T PRK08416         12 VISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKIDEDFDRVDF   90 (260)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHhcCCccE
Confidence            69999999999999999999999999875 5666666666665432 457899999999999999999999999999999


Q ss_pred             EEEccccCC--------CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           80 LINNAGIMF--------CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        80 lv~~ag~~~--------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      ||||||+..        +..+.+.++++..+++|+.+++.+++.++|.|.+.+     .++||++||..+..+       
T Consensus        91 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------  158 (260)
T PRK08416         91 FISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-----GGSIISLSSTGNLVY-------  158 (260)
T ss_pred             EEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-----CEEEEEEeccccccC-------
Confidence            999998642        122456678999999999999999999999998754     579999999876542       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HHHHHHHHHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VMRFLKFFSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~  227 (288)
                              .+....|++||+|+++|+++++.+++++|  |+||+|+||+++|++......    ........+..++.+|
T Consensus       159 --------~~~~~~Y~asK~a~~~~~~~la~el~~~g--i~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p  228 (260)
T PRK08416        159 --------IENYAGHGTSKAAVETMVKYAATELGEKN--IRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQP  228 (260)
T ss_pred             --------CCCcccchhhHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCH
Confidence                    45667899999999999999999999999  999999999999998654321    1112223345567899


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|+|+.++||++ +...+++|+.+. +++
T Consensus       229 ~~va~~~~~l~~-~~~~~~~G~~i~vdgg  256 (260)
T PRK08416        229 EDLAGACLFLCS-EKASWLTGQTIVVDGG  256 (260)
T ss_pred             HHHHHHHHHHcC-hhhhcccCcEEEEcCC
Confidence            999999999997 778899999876 444

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=6e-39  Score=274.99  Aligned_cols=228  Identities=16%  Similarity=0.115  Sum_probs=184.4

Q ss_pred             CcccC--CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh-------CCCC----ceEEEEecC--CCh-----
Q 023054            1 MLAGG--ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE-------DDTA----RVDTLKLDL--SSI-----   60 (288)
Q Consensus         1 lItGa--s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~----~~~~~~~Dl--~~~-----   60 (288)
                      |||||  ++|||+++|+.|+++|++|++ +|+.+.++++...+.+.       .+..    ....+.+|+  ++.     
T Consensus        13 lITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   91 (303)
T PLN02730         13 FIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPE   91 (303)
T ss_pred             EEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCch
Confidence            69999  899999999999999999999 88888888877666531       0111    146788898  433     


Q ss_pred             -------------HHHHHHHHHHHhcCCCcceEEEccccCC----CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHh
Q 023054           61 -------------ASIKDFAQNFIALNLPLNILINNAGIMF----CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT  123 (288)
Q Consensus        61 -------------~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  123 (288)
                                   ++++++++++.+.++++|+||||||...    +..+.+.++|++++++|+.+++.+++.++|.|.+ 
T Consensus        92 ~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~-  170 (303)
T PLN02730         92 DVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNP-  170 (303)
T ss_pred             hhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-
Confidence                         4899999999999999999999997532    3346788999999999999999999999999965 


Q ss_pred             hccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCcc-ccchhhHHHHHHHHHHHHHHhcc-cCCceEEEEeeCCcc
Q 023054          124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK-KAYGQSKLANILHANELSRRFQE-EGVNITANSVHPGLI  201 (288)
Q Consensus       124 ~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~-~~~~i~v~~v~PG~v  201 (288)
                            .|+||++||..+..+               .+.. ..|++||+|+.+|+++|+.|+++ +|  ||||+|+||++
T Consensus       171 ------~G~II~isS~a~~~~---------------~p~~~~~Y~asKaAl~~l~~~la~El~~~~g--IrVn~V~PG~v  227 (303)
T PLN02730        171 ------GGASISLTYIASERI---------------IPGYGGGMSSAKAALESDTRVLAFEAGRKYK--IRVNTISAGPL  227 (303)
T ss_pred             ------CCEEEEEechhhcCC---------------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCC--eEEEEEeeCCc
Confidence                  489999999987653               3433 47999999999999999999986 68  99999999999


Q ss_pred             cCCCCCCChHHHH----HHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          202 MTNLFKHSAVVMR----FLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       202 ~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +|+|....+....    .....+..++.+|+++|..++||++ +.+.+++|+.+..+
T Consensus       228 ~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS-~~a~~itG~~l~vd  283 (303)
T PLN02730        228 GSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLAS-PLASAITGATIYVD  283 (303)
T ss_pred             cCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCCEEEEC
Confidence            9999764311111    1122244566799999999999997 78899999987743

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-38  Score=269.11  Aligned_cols=225  Identities=19%  Similarity=0.133  Sum_probs=181.5

Q ss_pred             CcccC--CChhHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGG--ASGIGLETARVLALRKAHVIIAARNM--AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGa--s~gIG~~ia~~La~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||  ++|||+++|++|+++|++|++++|+.  +.++++.+++     +.++.++.+|++|+++++++++++.+.+++
T Consensus        11 lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889         11 LVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             EEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            68999  89999999999999999999999864  3334443333     235778999999999999999999999999


Q ss_pred             cceEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcc
Q 023054           77 LNILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIR  150 (288)
Q Consensus        77 id~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  150 (288)
                      +|+||||||+...      ..+.+.++|++.+++|+.+++.+++.++|+|.+       +|+||++++... .       
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-------~g~Iv~is~~~~-~-------  150 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-------GGSIVGLDFDAT-V-------  150 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-------CceEEEEeeccc-c-------
Confidence            9999999998632      224566788999999999999999999999964       479999986532 1       


Q ss_pred             ccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HHHHHHHHHhh-hcC
Q 023054          151 FQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VMRFLKFFSFF-LWK  225 (288)
Q Consensus       151 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~-~~~  225 (288)
                              +.+.+..|++||+|+.+|+++|+.|++++|  |+||+|+||+++|++......    ...+.+..+.. ++.
T Consensus       151 --------~~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~  220 (256)
T PRK07889        151 --------AWPAYDWMGVAKAALESTNRYLARDLGPRG--IRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVK  220 (256)
T ss_pred             --------cCCccchhHHHHHHHHHHHHHHHHHhhhcC--eEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccC
Confidence                    245567799999999999999999999999  999999999999998653311    11122223443 467


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+|+|+.++||++ +...+++|+++. +++.
T Consensus       221 ~p~evA~~v~~l~s-~~~~~~tG~~i~vdgg~  251 (256)
T PRK07889        221 DPTPVARAVVALLS-DWFPATTGEIVHVDGGA  251 (256)
T ss_pred             CHHHHHHHHHHHhC-cccccccceEEEEcCce
Confidence            99999999999997 778899999887 4443

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.4e-37  Score=271.28  Aligned_cols=273  Identities=31%  Similarity=0.495  Sum_probs=210.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+++++..+++...  +.++.++.+|++|.++++++++++.+..+++|+|
T Consensus        10 lVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~l   87 (322)
T PRK07453         10 IITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDAL   87 (322)
T ss_pred             EEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhCCCccEE
Confidence            69999999999999999999999999999999888877777432  4578899999999999999999988877889999


Q ss_pred             EEccccCCCC---CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc-------cCCcc
Q 023054           81 INNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY-------KGGIR  150 (288)
Q Consensus        81 v~~ag~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~-------~~~~~  150 (288)
                      |||||+....   ...+.++++.++++|+.+++.+++.++|.|.++..   ..+|||++||..+....       +...+
T Consensus        88 i~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~---~~~riV~vsS~~~~~~~~~~~~~~~~~~~  164 (322)
T PRK07453         88 VCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPA---PDPRLVILGTVTANPKELGGKIPIPAPAD  164 (322)
T ss_pred             EECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC---CCceEEEEcccccCccccCCccCCCCccc
Confidence            9999986432   24577889999999999999999999999987531   02599999998764311       00111


Q ss_pred             ccCCC-------------CCCCCCccccchhhHHHHHHHHHHHHHHhc-ccCCceEEEEeeCCcc-cCCCCCCChHH-HH
Q 023054          151 FQKIN-------------DRAGYSDKKAYGQSKLANILHANELSRRFQ-EEGVNITANSVHPGLI-MTNLFKHSAVV-MR  214 (288)
Q Consensus       151 ~~~~~-------------~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~~~i~v~~v~PG~v-~t~~~~~~~~~-~~  214 (288)
                      +.++.             ....+.+..+|+.||+++..+++.+++++. ..|  |+||+|+||+| .|++.+..... ..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~~~~~~~~~  242 (322)
T PRK07453        165 LGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTG--ITFSSLYPGCVADTPLFRNTPPLFQK  242 (322)
T ss_pred             hhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCCcccccCCHHHHH
Confidence            11111             112355678899999999999999999995 357  99999999999 58887654221 11


Q ss_pred             HHHHH---HhhhcCChHHHHHHHHHHhcCCCccCCCceeeccCcc---------CCCCccccCHHHHHHHHHHHHHHHH
Q 023054          215 FLKFF---SFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNE---------MPPSALARDETLAKKLWDFSNKMIN  281 (288)
Q Consensus       215 ~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  281 (288)
                      +...+   ......+++..++.+++++.++.. ..+|.||.++..         ...++.+.|.+.+++||++|+++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~y~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~lw~~s~~~~~  320 (322)
T PRK07453        243 LFPWFQKNITGGYVSQELAGERVAQVVADPEF-AQSGVHWSWGNRQKKDRKAFSQELSDRATDDDKARRLWDLSAKLVG  320 (322)
T ss_pred             HHHHHHHHHhhceecHHHHhhHHHHhhcCccc-CCCCceeecCCCCCcCccccccccchhhcCHHHHHHHHHHHHHHhC
Confidence            11111   122346889999999999975544 479999974332         2456678899999999999999986

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-38  Score=271.95  Aligned_cols=233  Identities=19%  Similarity=0.196  Sum_probs=191.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh---------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM---------AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFI   71 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (288)
                      |||||++|||+++|+.|+++|++|++++++.         +.++++.+++...  +.++.++.+|++|.+++.++++.+.
T Consensus        10 lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (286)
T PRK07791         10 IVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAANLVDAAV   87 (286)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHH
Confidence            6999999999999999999999999998876         6677777777654  4568899999999999999999999


Q ss_pred             hcCCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhcc-CCCCCeEEEEcCccccccccCC
Q 023054           72 ALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKE-TGIEGRIVNLSSIAHQYTYKGG  148 (288)
Q Consensus        72 ~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~  148 (288)
                      +.++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+.... ....|+||++||..+..+    
T Consensus        88 ~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~----  163 (286)
T PRK07791         88 ETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG----  163 (286)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC----
Confidence            999999999999998653  2366778999999999999999999999999764211 111479999999987763    


Q ss_pred             ccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhh--hcCC
Q 023054          149 IRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFF--LWKN  226 (288)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~~  226 (288)
                                 .++...|++||+|+.+|+++++.+++++|  |+||+|+|| +.|++....  ........+..  ...+
T Consensus       164 -----------~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~Pg-~~T~~~~~~--~~~~~~~~~~~~~~~~~  227 (286)
T PRK07791        164 -----------SVGQGNYSAAKAGIAALTLVAAAELGRYG--VTVNAIAPA-ARTRMTETV--FAEMMAKPEEGEFDAMA  227 (286)
T ss_pred             -----------CCCchhhHHHHHHHHHHHHHHHHHHHHhC--eEEEEECCC-CCCCcchhh--HHHHHhcCcccccCCCC
Confidence                       56678999999999999999999999999  999999999 789886432  11111111211  3468


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+|+.++||++ +...+++|+++. ++|.
T Consensus       228 pedva~~~~~L~s-~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        228 PENVSPLVVWLGS-AESRDVTGKVFEVEGGK  257 (286)
T ss_pred             HHHHHHHHHHHhC-chhcCCCCcEEEEcCCc
Confidence            9999999999997 778999999887 5554

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-38  Score=264.48  Aligned_cols=231  Identities=20%  Similarity=0.260  Sum_probs=197.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        13 lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   90 (254)
T PRK08085         13 LITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVL   90 (254)
T ss_pred             EEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999998888887777654  3568889999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++++++|+.+++.+++.+++.|.+++     .++||++||..+..+              
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~--------------  151 (254)
T PRK08085         91 INNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-----AGKIINICSMQSELG--------------  151 (254)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEccchhccC--------------
Confidence            999997643  23567788999999999999999999999997654     589999999876652              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|+++|++++.++++++.+++++|  |+||+|+||+++|++.....    .........|..++.+|+|+|+.+
T Consensus       152 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~  228 (254)
T PRK08085        152 -RDTITPYAASKGAVKMLTRGMCVELARHN--IQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAA  228 (254)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             45667899999999999999999999999  99999999999999875421    112223334566778999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +.+.++||+.+. |+|.
T Consensus       229 ~~l~~-~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        229 VFLSS-KASDFVNGHLLFVDGGM  250 (254)
T ss_pred             HHHhC-ccccCCcCCEEEECCCe
Confidence            99997 889999999877 5543

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-38  Score=266.47  Aligned_cols=227  Identities=21%  Similarity=0.231  Sum_probs=190.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|.++++++++.+.+.++++|+|
T Consensus        10 lItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265         10 IVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999988777766554     3568899999999999999999999999999999


Q ss_pred             EEccccCCC-CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFC-PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||||.... ..+.+.++|++.+++|+.+++.+++.++|.|. +.     .|+||++||..+..+               
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-----~g~ii~isS~~~~~~---------------  143 (261)
T PRK08265         85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-----GGAIVNFTSISAKFA---------------  143 (261)
T ss_pred             EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-----CcEEEEECchhhccC---------------
Confidence            999997543 23456788999999999999999999999997 33     589999999987763               


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----HHHHHH-HHHHhhhcCChHHHHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----VVMRFL-KFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~a~~  233 (288)
                      .+....|+++|+++..++++++.+++++|  |+||+|+||+++|++.....     ...... ...+..++.+|+|+|+.
T Consensus       144 ~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~  221 (261)
T PRK08265        144 QTGRWLYPASKAAIRQLTRSMAMDLAPDG--IRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQV  221 (261)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcccC--EEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHH
Confidence            55677899999999999999999999988  99999999999999865321     001111 11244566789999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++||++ +...+++|+.|. |+|.
T Consensus       222 ~~~l~s-~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        222 VAFLCS-DAASFVTGADYAVDGGY  244 (261)
T ss_pred             HHHHcC-ccccCccCcEEEECCCe
Confidence            999997 778999999776 5554

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-37  Score=265.55  Aligned_cols=232  Identities=25%  Similarity=0.267  Sum_probs=195.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.+++..+++...  +.++.++++|+++++++.++++++.+.++++|+|
T Consensus        14 lVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   91 (278)
T PRK08277         14 VITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILEDFGPCDIL   91 (278)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999988888777777554  4578999999999999999999999989999999


Q ss_pred             EEccccCCC-----------------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           81 INNAGIMFC-----------------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        81 v~~ag~~~~-----------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                      |||||...+                 ..+.+.++|++.+++|+.+++.+++.++|.|.+.+     .++||++||..+..
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~ii~isS~~~~~  166 (278)
T PRK08277         92 INGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-----GGNIINISSMNAFT  166 (278)
T ss_pred             EECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CcEEEEEccchhcC
Confidence            999996532                 12455678999999999999999999999998754     58999999998775


Q ss_pred             cccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---------HHHH
Q 023054          144 TYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---------VVMR  214 (288)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---------~~~~  214 (288)
                      +               .++...|++||+|+++++++++.+++..+  |+||+|+||++.|++.....         ....
T Consensus       167 ~---------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  229 (278)
T PRK08277        167 P---------------LTKVPAYSAAKAAISNFTQWLAVHFAKVG--IRVNAIAPGFFLTEQNRALLFNEDGSLTERANK  229 (278)
T ss_pred             C---------------CCCCchhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeccCcCcchhhhhccccccchhHHHH
Confidence            3               56678899999999999999999999998  99999999999999754321         1111


Q ss_pred             HHHHHHhhhcCChHHHHHHHHHHhcCC-CccCCCceeec-cCccC
Q 023054          215 FLKFFSFFLWKNVPQGAATTCYVALHP-NLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       215 ~~~~~~~~~~~~~~~~a~~~~~l~~~~-~~~~~tG~~~~-~~~~~  257 (288)
                      .....+..++.+|+|+|+.++||++ + .+.++||+.+. |+|..
T Consensus       230 ~~~~~p~~r~~~~~dva~~~~~l~s-~~~~~~~tG~~i~vdgG~~  273 (278)
T PRK08277        230 ILAHTPMGRFGKPEELLGTLLWLAD-EKASSFVTGVVLPVDGGFS  273 (278)
T ss_pred             HhccCCccCCCCHHHHHHHHHHHcC-ccccCCcCCCEEEECCCee
Confidence            2223355677799999999999997 6 78999999887 55543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.6e-37  Score=262.14  Aligned_cols=229  Identities=18%  Similarity=0.204  Sum_probs=189.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++++..  ++..+.+...  +.++.++++|++|.++++++++++.+.++++|++
T Consensus        14 lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~l   89 (253)
T PRK08993         14 VVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVAEFGHIDIL   89 (253)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999887643  3344444433  4568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++++++|+.+++.++++++|.|.+++.    .|+||++||..+..+              
T Consensus        90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----~g~iv~isS~~~~~~--------------  151 (253)
T PRK08993         90 VNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN----GGKIINIASMLSFQG--------------  151 (253)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC----CeEEEEECchhhccC--------------
Confidence            999998643  235677889999999999999999999999976421    479999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .+....|+++|+|+++++++++.++.++|  |+||+|+||+++|++.....    ......+.++..++.+|+|+|+.+
T Consensus       152 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~  228 (253)
T PRK08993        152 -GIRVPSYTASKSGVMGVTRLMANEWAKHN--INVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPV  228 (253)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             44567899999999999999999999999  99999999999999865321    111233345666788999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +||++ +...+++|+.+. |+|
T Consensus       229 ~~l~s-~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        229 VFLAS-SASDYINGYTIAVDGG  249 (253)
T ss_pred             HHHhC-ccccCccCcEEEECCC
Confidence            99997 788999999876 443

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-37  Score=260.97  Aligned_cols=228  Identities=25%  Similarity=0.291  Sum_probs=186.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc----CC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAA-RNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL----NL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~----~~   75 (288)
                      |||||++|||+++|+.|+++|++|++++ |+.+..++...++...  +.++..+.+|+++.+++..+++++.+.    ++
T Consensus         8 lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g   85 (252)
T PRK12747          8 LVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNELQNRTG   85 (252)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHHhhhhcC
Confidence            6999999999999999999999999875 6667777777766554  456788899999999999998887653    33


Q ss_pred             --CcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           76 --PLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        76 --~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                        ++|+||||||+...  ..+.+.++|++++++|+.+++++++.++|.|.+       .|+||++||..+..+       
T Consensus        86 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~-------  151 (252)
T PRK12747         86 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRIS-------  151 (252)
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-------CCeEEEECCcccccC-------
Confidence              89999999997543  235667789999999999999999999999965       479999999987653       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHH-HHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKF-FSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~-~~~~~~~~~  227 (288)
                              .++...|++||+++++++++++.+++++|  |+||+|+||++.|++.....   ........ .+..++.+|
T Consensus       152 --------~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (252)
T PRK12747        152 --------LPDFIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEV  221 (252)
T ss_pred             --------CCCchhHHHHHHHHHHHHHHHHHHHhHcC--CEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCH
Confidence                    45668899999999999999999999999  99999999999999865321   11111111 134566799


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|+|+.++||++ +.+.+++|+.+. ++|
T Consensus       222 ~dva~~~~~l~s-~~~~~~~G~~i~vdgg  249 (252)
T PRK12747        222 EDIADTAAFLAS-PDSRWVTGQLIDVSGG  249 (252)
T ss_pred             HHHHHHHHHHcC-ccccCcCCcEEEecCC
Confidence            999999999997 778899999877 444

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-37  Score=267.40  Aligned_cols=228  Identities=22%  Similarity=0.200  Sum_probs=188.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM--AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||+++|+.|+++|++|++++|+.  +..+++.+.+...  +.++.++.+|++|.+++.++++++.+.++++|
T Consensus        53 lITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  130 (294)
T PRK07985         53 LVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAHKALGGLD  130 (294)
T ss_pred             EEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999999999988653  3445554444333  45688899999999999999999999999999


Q ss_pred             eEEEccccCC---CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ++|||||...   +..+.+.++|++++++|+.+++.++++++|+|.+       .++||++||..+..+           
T Consensus       131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~iSS~~~~~~-----------  192 (294)
T PRK07985        131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-------GASIITTSSIQAYQP-----------  192 (294)
T ss_pred             EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-------CCEEEEECCchhccC-----------
Confidence            9999999753   2336677899999999999999999999999964       479999999987653           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a  231 (288)
                          .+...+|+++|+|++.+++.++.+++++|  |+||+|+||+++|++....    .....+....+..++.+|+|+|
T Consensus       193 ----~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva  266 (294)
T PRK07985        193 ----SPHLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELA  266 (294)
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHHhHhC--cEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHH
Confidence                45667899999999999999999999999  9999999999999985321    1112233334555678999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +.++||++ +.+.+++|+.+. ++|
T Consensus       267 ~~~~fL~s-~~~~~itG~~i~vdgG  290 (294)
T PRK07985        267 PVYVYLAS-QESSYVTAEVHGVCGG  290 (294)
T ss_pred             HHHHhhhC-hhcCCccccEEeeCCC
Confidence            99999997 788999999887 444

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.6e-38  Score=257.59  Aligned_cols=213  Identities=25%  Similarity=0.300  Sum_probs=189.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|.+||++|+++++++.|.+..+++.+++++.   ++++.+.||+++.+.+.++.+++++..|.+|+|
T Consensus        42 LITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~---g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~IL  118 (300)
T KOG1201|consen   42 LITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI---GEAKAYTCDISDREEIYRLAKKVKKEVGDVDIL  118 (300)
T ss_pred             EEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc---CceeEEEecCCCHHHHHHHHHHHHHhcCCceEE
Confidence            69999999999999999999999999999999999999999876   289999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+.+++++++|+.|+++.+++|+|.|.+..     +|+||.++|++|..+              
T Consensus       119 VNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-----~GHIV~IaS~aG~~g--------------  179 (300)
T KOG1201|consen  119 VNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-----NGHIVTIASVAGLFG--------------  179 (300)
T ss_pred             EeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-----CceEEEehhhhcccC--------------
Confidence            999999865  34788899999999999999999999999999876     799999999999884              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCC-ceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGV-NITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~-~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                       .++..+||+||+|+.+|.++|..|+...++ +|+...|+|++++|.|........      ......+|+++|+.++..
T Consensus       180 -~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~------~l~P~L~p~~va~~Iv~a  252 (300)
T KOG1201|consen  180 -PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP------TLAPLLEPEYVAKRIVEA  252 (300)
T ss_pred             -CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc------cccCCCCHHHHHHHHHHH
Confidence             778899999999999999999999998764 499999999999999988521111      112335899999999998


Q ss_pred             hcCCC
Q 023054          238 ALHPN  242 (288)
Q Consensus       238 ~~~~~  242 (288)
                      ...+.
T Consensus       253 i~~n~  257 (300)
T KOG1201|consen  253 ILTNQ  257 (300)
T ss_pred             HHcCC
Confidence            87443

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=263.66  Aligned_cols=226  Identities=20%  Similarity=0.200  Sum_probs=187.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+++.++++.+++     +.++.++++|++|+++++++++++.+.++++|+|
T Consensus        10 lVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200         10 LITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999988877665544     3468889999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCc----chhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           81 INNAGIMFC---PYQISEDG----IEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      |||||+...   ..+.+.++    |++++++|+.+++.+++.++|.|.+.      .|+||++||..+..+         
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~~---------  149 (263)
T PRK06200         85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS------GGSMIFTLSNSSFYP---------  149 (263)
T ss_pred             EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc------CCEEEEECChhhcCC---------
Confidence            999998542   22344443    88899999999999999999998764      479999999987653         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC------------h-HHHHHHHHHH
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS------------A-VVMRFLKFFS  220 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~------------~-~~~~~~~~~~  220 (288)
                            .++...|++||+|++.|+++++.++++ +  |+||+|+||+++|++....            + .........|
T Consensus       150 ------~~~~~~Y~~sK~a~~~~~~~la~el~~-~--Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  220 (263)
T PRK06200        150 ------GGGGPLYTASKHAVVGLVRQLAYELAP-K--IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITP  220 (263)
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHHhc-C--cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCC
Confidence                  445678999999999999999999987 4  9999999999999985421            0 1112223346


Q ss_pred             hhhcCChHHHHHHHHHHhcCCC-ccCCCceeec-cCcc
Q 023054          221 FFLWKNVPQGAATTCYVALHPN-LKGVTGKYFL-DCNE  256 (288)
Q Consensus       221 ~~~~~~~~~~a~~~~~l~~~~~-~~~~tG~~~~-~~~~  256 (288)
                      ..++.+|+|+|+.++||++ +. +.++||+.|. |+|+
T Consensus       221 ~~r~~~~~eva~~~~fl~s-~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        221 LQFAPQPEDHTGPYVLLAS-RRNSRALTGVVINADGGL  257 (263)
T ss_pred             CCCCCCHHHHhhhhhheec-ccccCcccceEEEEcCce
Confidence            6778899999999999997 66 8999999887 5554

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=3.1e-37  Score=260.74  Aligned_cols=230  Identities=20%  Similarity=0.221  Sum_probs=190.4

Q ss_pred             CcccCCChhHHHHHHHHHH----CCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLAL----RKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||++|||+++|++|++    +|++|++++|+.+.++++.+++....++.++.++.+|+++.++++++++.+.+.++.
T Consensus         4 lItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   83 (256)
T TIGR01500         4 LVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRP   83 (256)
T ss_pred             EEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcccc
Confidence            6999999999999999997    799999999999999888888876444567899999999999999999999887654


Q ss_pred             ----cceEEEccccCCCC---C-C-CCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC
Q 023054           77 ----LNILINNAGIMFCP---Y-Q-ISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG  147 (288)
Q Consensus        77 ----id~lv~~ag~~~~~---~-~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  147 (288)
                          +|+||||||.....   . + .+.+++++.+++|+.+++.+++.++|.|.++.   ...++||++||..+..+   
T Consensus        84 ~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~---~~~~~iv~isS~~~~~~---  157 (256)
T TIGR01500        84 KGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP---GLNRTVVNISSLCAIQP---  157 (256)
T ss_pred             CCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC---CCCCEEEEECCHHhCCC---
Confidence                36999999975331   1 1 23578999999999999999999999997642   01479999999987653   


Q ss_pred             CccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------hHHHHHHHHHH
Q 023054          148 GIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------AVVMRFLKFFS  220 (288)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~  220 (288)
                                  .+....|++||+|+++|+++++.+++..|  |+||+|+||+++|+|....       .....+....+
T Consensus       158 ------------~~~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  223 (256)
T TIGR01500       158 ------------FKGWALYCAGKAARDMLFQVLALEEKNPN--VRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKA  223 (256)
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHh
Confidence                        56678899999999999999999999988  9999999999999986532       11122334456


Q ss_pred             hhhcCChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          221 FFLWKNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       221 ~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      ..++.+|+|+|+.++++++  ..+++||+.+.
T Consensus       224 ~~~~~~p~eva~~~~~l~~--~~~~~~G~~~~  253 (256)
T TIGR01500       224 KGKLVDPKVSAQKLLSLLE--KDKFKSGAHVD  253 (256)
T ss_pred             cCCCCCHHHHHHHHHHHHh--cCCcCCcceee
Confidence            6678899999999999995  56899999874

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-37  Score=259.30  Aligned_cols=229  Identities=21%  Similarity=0.256  Sum_probs=194.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++++.+++...  +.++.++.+|+++.++++.+++++.+.++++|+|
T Consensus        12 lItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   89 (252)
T PRK07035         12 LVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRERHGRLDIL   89 (252)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888888877654  3568889999999999999999999999999999


Q ss_pred             EEccccCC---CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||...   +..+.+.++++..+++|+.+++.++++++|+|.+..     .++|+++||..+..+             
T Consensus        90 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-------------  151 (252)
T PRK07035         90 VNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-----GGSIVNVASVNGVSP-------------  151 (252)
T ss_pred             EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CcEEEEECchhhcCC-------------
Confidence            99999643   223566788999999999999999999999997754     589999999887653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                        .++...|++||++++++++++++++..+|  |+||+|+||+++|++.....    .........+..++.+|+|+|+.
T Consensus       152 --~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  227 (252)
T PRK07035        152 --GDFQGIYSITKAAVISMTKAFAKECAPFG--IRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGA  227 (252)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHH
Confidence              45678899999999999999999999999  99999999999999865431    11122223355567899999999


Q ss_pred             HHHHhcCCCccCCCceeeccC
Q 023054          234 TCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++||++ +...+++|+++..+
T Consensus       228 ~~~l~~-~~~~~~~g~~~~~d  247 (252)
T PRK07035        228 VLYLAS-DASSYTTGECLNVD  247 (252)
T ss_pred             HHHHhC-ccccCccCCEEEeC
Confidence            999997 77889999988743

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-37  Score=260.54  Aligned_cols=231  Identities=20%  Similarity=0.194  Sum_probs=194.5

Q ss_pred             CcccCCC-hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~-gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++ |||+++++.|+++|++|++++|+.+++++..+++....+..++.++++|++++++++++++++.+.++++|+
T Consensus        21 lItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  100 (262)
T PRK07831         21 LVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDV  100 (262)
T ss_pred             EEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999985 999999999999999999999999888888877766443457889999999999999999999888899999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||....  ..+.+.++|++.+++|+.+++.+++.++|.|.....    .++||+++|..+..+             
T Consensus       101 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~g~iv~~ss~~~~~~-------------  163 (262)
T PRK07831        101 LVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH----GGVIVNNASVLGWRA-------------  163 (262)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEeCchhhcCC-------------
Confidence            9999997543  235667889999999999999999999999976421    479999999887653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                        .++...|+++|+|+++++++++.+++++|  |+||+|+||++.|++....   .....+....+..++.+|+|+|+.+
T Consensus       164 --~~~~~~Y~~sKaal~~~~~~la~e~~~~g--I~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~  239 (262)
T PRK07831        164 --QHGQAHYAAAKAGVMALTRCSALEAAEYG--VRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVI  239 (262)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence              45677899999999999999999999999  9999999999999986532   1112222333455667999999999


Q ss_pred             HHHhcCCCccCCCceeecc
Q 023054          235 CYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~  253 (288)
                      +||++ +...++||+.+..
T Consensus       240 ~~l~s-~~~~~itG~~i~v  257 (262)
T PRK07831        240 AFLAS-DYSSYLTGEVVSV  257 (262)
T ss_pred             HHHcC-chhcCcCCceEEe
Confidence            99997 7789999998863

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-37  Score=260.56  Aligned_cols=228  Identities=21%  Similarity=0.254  Sum_probs=192.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+ +..++..+.+...  +.++.++.+|+++.++++++++++.+.++++|++
T Consensus        19 lItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   95 (258)
T PRK06935         19 IVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALEEFGKIDIL   95 (258)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999998 5555555555443  4568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++.+++|+.+++.++++++|+|.+++     .++||++||..+..+              
T Consensus        96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  156 (258)
T PRK06935         96 VNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-----SGKIINIASMLSFQG--------------  156 (258)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-----CeEEEEECCHHhccC--------------
Confidence            999998643  23556778999999999999999999999998764     589999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .+....|+++|+++++++++++++++..|  |+||+|+||+++|++.....    ......+..+..++.+|+|+|+.+
T Consensus       157 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (258)
T PRK06935        157 -GKFVPAYTASKHGVAGLTKAFANELAAYN--IQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAA  233 (258)
T ss_pred             -CCCchhhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence             45667899999999999999999999999  99999999999999864321    112233344667788999999999


Q ss_pred             HHHhcCCCccCCCceeeccC
Q 023054          235 CYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +||++ +...+++|+.+..+
T Consensus       234 ~~l~s-~~~~~~~G~~i~~d  252 (258)
T PRK06935        234 VFLAS-RASDYVNGHILAVD  252 (258)
T ss_pred             HHHcC-hhhcCCCCCEEEEC
Confidence            99997 78899999988743

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-37  Score=258.72  Aligned_cols=230  Identities=26%  Similarity=0.283  Sum_probs=195.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++.+++.++++.+.+.++++|++
T Consensus        11 lItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   88 (253)
T PRK06172         11 LVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIAAYGRLDYA   88 (253)
T ss_pred             EEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999998888777777554  4678999999999999999999999989999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||+|....   ..+.+.+++++++++|+.+++.++++++|+|.++.     .++||++||..+..+             
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~ii~~sS~~~~~~-------------  150 (253)
T PRK06172         89 FNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-----GGAIVNTASVAGLGA-------------  150 (253)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEECchhhccC-------------
Confidence            999998543   23557788999999999999999999999997754     579999999987753             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----HHHHHHHHHHhhhcCChHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----VVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                        .++...|+++|+++++|+++++.++..+|  |+||+|+||+++|++.....     ....+....+..+..+|+++++
T Consensus       151 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~~--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~  226 (253)
T PRK06172        151 --APKMSIYAASKHAVIGLTKSAAIEYAKKG--IRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVAS  226 (253)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHH
Confidence              56678899999999999999999999988  99999999999999876431     1111222234456679999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCc
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      .++||++ +...+++|++|. ++|
T Consensus       227 ~~~~l~~-~~~~~~~G~~i~~dgg  249 (253)
T PRK06172        227 AVLYLCS-DGASFTTGHALMVDGG  249 (253)
T ss_pred             HHHHHhC-ccccCcCCcEEEECCC
Confidence            9999997 678899999887 444

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=7.5e-37  Score=258.35  Aligned_cols=231  Identities=22%  Similarity=0.282  Sum_probs=194.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+..++...++...  +.++.++.+|++++++++++++++.+.++++|+|
T Consensus         6 lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   83 (256)
T PRK08643          6 LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVV   83 (256)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888877777654  4568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++.+++|+.+++.+++.+++.|.+.+.    .++||++||..+..+              
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~iv~~sS~~~~~~--------------  145 (256)
T PRK08643         84 VNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH----GGKIINATSQAGVVG--------------  145 (256)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CCEEEEECccccccC--------------
Confidence            999997643  235567889999999999999999999999976431    479999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-------------HHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-------------VMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~~~~~~  225 (288)
                       .++...|+++|++++.+++.++.++.+.|  |+||+|+||++.|++......             ...+....+..++.
T Consensus       146 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK08643        146 -NPELAVYSSTKFAVRGLTQTAARDLASEG--ITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLS  222 (256)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCc
Confidence             45667899999999999999999999998  999999999999998653210             11122234555677


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|+++|+.++||++ +...+++|+.|. |+|
T Consensus       223 ~~~~va~~~~~L~~-~~~~~~~G~~i~vdgg  252 (256)
T PRK08643        223 EPEDVANCVSFLAG-PDSDYITGQTIIVDGG  252 (256)
T ss_pred             CHHHHHHHHHHHhC-ccccCccCcEEEeCCC
Confidence            99999999999997 789999999887 444

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-37  Score=260.28  Aligned_cols=236  Identities=22%  Similarity=0.197  Sum_probs=184.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||||| +|||+++|++|+ +|++|++++|+.+.+++..+++...  +.++.++.+|++|.+++.++++++ +.++++|+|
T Consensus         6 lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~l   80 (275)
T PRK06940          6 VVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGPVTGL   80 (275)
T ss_pred             EEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCCCCEE
Confidence            58998 699999999997 8999999999988887777777543  457889999999999999999988 457899999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccccccc-C--------Cccc
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYK-G--------GIRF  151 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~-~--------~~~~  151 (288)
                      |||||+..     ..+++++++++|+.+++.+++.++|.|.+       .+++|++||.++..... .        ....
T Consensus        81 i~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  148 (275)
T PRK06940         81 VHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAP-------GGAGVVIASQSGHRLPALTAEQERALATTPT  148 (275)
T ss_pred             EECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhh-------CCCEEEEEecccccCcccchhhhcccccccc
Confidence            99999753     23568999999999999999999999965       46889999988765310 0        0000


Q ss_pred             cCCC------CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC------hHHHHHHHHH
Q 023054          152 QKIN------DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS------AVVMRFLKFF  219 (288)
Q Consensus       152 ~~~~------~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~  219 (288)
                      .++.      .....++...|++||+|+..+++.++.+++++|  |+||+|+||+++|++....      ..........
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--Irvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  226 (275)
T PRK06940        149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERG--ARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS  226 (275)
T ss_pred             ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCC--eEEEEeccCcCcCccchhhhcCCchHHHHHHhhhC
Confidence            0000      000002457899999999999999999999998  9999999999999986431      0111222334


Q ss_pred             HhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          220 SFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       220 ~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +..++.+|+|+|+.++||++ +.+.++||+.+. |+|.
T Consensus       227 p~~r~~~peeia~~~~fL~s-~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        227 PAGRPGTPDEIAALAEFLMG-PRGSFITGSDFLVDGGA  263 (275)
T ss_pred             CcccCCCHHHHHHHHHHHcC-cccCcccCceEEEcCCe
Confidence            56677899999999999997 788999999776 5554

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.3e-37  Score=285.66  Aligned_cols=230  Identities=23%  Similarity=0.273  Sum_probs=194.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++     +.++..+.+|++|+++++++++++.+.++++|+|
T Consensus       273 lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        273 AITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988887766554     3457788999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++++++|+.+++++++.++|+|.+       .|+||++||.++..+             
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~-------------  407 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ-------GGVIVNLGSIASLLA-------------  407 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc-------CCEEEEECchhhcCC-------------
Confidence            999998632   335677899999999999999999999999932       589999999988763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----HHHHHHHHHHhhhcCChHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----VVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                        .++...|++||+++++|+++++.+++++|  |+||+|+||+++|++.....     ....+.+..+..++.+|+|+|+
T Consensus       408 --~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~  483 (520)
T PRK06484        408 --LPPRNAYCASKAAVTMLSRSLACEWAPAG--IRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAE  483 (520)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHH
Confidence              56778999999999999999999999999  99999999999999865321     1122233345556779999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCccCCCC
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCNEMPPS  260 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~~~~~~  260 (288)
                      .++||++ +...++||+.+. ++|+....
T Consensus       484 ~~~~l~s-~~~~~~~G~~i~vdgg~~~~~  511 (520)
T PRK06484        484 AIAFLAS-PAASYVNGATLTVDGGWTAFG  511 (520)
T ss_pred             HHHHHhC-ccccCccCcEEEECCCccCCC
Confidence            9999997 778899999876 66654333

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-36  Score=257.61  Aligned_cols=228  Identities=21%  Similarity=0.260  Sum_probs=188.7

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCC-----------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHH
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARN-----------MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFA   67 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   67 (288)
                      |||||+  +|||+++|++|+++|++|++++|+           .+...+..+++...  +.++.++.+|+++.+++++++
T Consensus        10 lVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~i~~~~   87 (256)
T PRK12859         10 VVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQNDAPKELL   87 (256)
T ss_pred             EEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHH
Confidence            699999  499999999999999999998642           23333444455443  567899999999999999999


Q ss_pred             HHHHhcCCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc
Q 023054           68 QNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY  145 (288)
Q Consensus        68 ~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  145 (288)
                      +++.+.++++|+||||||....  ..+.+.++|++.+++|+.+++.+.+.++|.|.++.     .|+||++||..+..  
T Consensus        88 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~--  160 (256)
T PRK12859         88 NKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-----GGRIINMTSGQFQG--  160 (256)
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-----CeEEEEEcccccCC--
Confidence            9999989999999999997643  34677889999999999999999999999997654     68999999988764  


Q ss_pred             cCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcC
Q 023054          146 KGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWK  225 (288)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  225 (288)
                                   +.++...|+++|+++.+|+++++.++.+++  |+||+|+||+++|++.... .........+.....
T Consensus       161 -------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~~~  224 (256)
T PRK12859        161 -------------PMVGELAYAATKGAIDALTSSLAAEVAHLG--ITVNAINPGPTDTGWMTEE-IKQGLLPMFPFGRIG  224 (256)
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEEccccCCCCCHH-HHHHHHhcCCCCCCc
Confidence                         356778999999999999999999999998  9999999999999975421 122233334555667


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +|+|+|+.++|+++ +...+++|+++..+
T Consensus       225 ~~~d~a~~~~~l~s-~~~~~~~G~~i~~d  252 (256)
T PRK12859        225 EPKDAARLIKFLAS-EEAEWITGQIIHSE  252 (256)
T ss_pred             CHHHHHHHHHHHhC-ccccCccCcEEEeC
Confidence            99999999999997 77889999988743

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=4.5e-37  Score=260.02  Aligned_cols=224  Identities=23%  Similarity=0.244  Sum_probs=185.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+...             ..++.++.||++|+++++++++++.+.++++|+|
T Consensus        10 lItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398         10 IVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             EEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999998643             1257889999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|+|.++.     .++||++||..+..+              
T Consensus        77 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  137 (258)
T PRK06398         77 VNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-----KGVIINIASVQSFAV--------------  137 (258)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CeEEEEeCcchhccC--------------
Confidence            999998643  33567788999999999999999999999998754     589999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---------HHH----HHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---------VVM----RFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---------~~~----~~~~~~~~~~~~  225 (288)
                       .++...|++||++++++++.++.++.+ +  |+||+|+||+++|++.....         ...    .+....+..+..
T Consensus       138 -~~~~~~Y~~sKaal~~~~~~la~e~~~-~--i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (258)
T PRK06398        138 -TRNAAAYVTSKHAVLGLTRSIAVDYAP-T--IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVG  213 (258)
T ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhCC-C--CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCc
Confidence             567789999999999999999999985 3  99999999999999864320         000    111123445667


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCccCCCCc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNEMPPSA  261 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~~~~  261 (288)
                      +|+|+|+.++||++ +...+++|+.+. |+|.....+
T Consensus       214 ~p~eva~~~~~l~s-~~~~~~~G~~i~~dgg~~~~~~  249 (258)
T PRK06398        214 KPEEVAYVVAFLAS-DLASFITGECVTVDGGLRALIP  249 (258)
T ss_pred             CHHHHHHHHHHHcC-cccCCCCCcEEEECCccccCCC
Confidence            99999999999997 778899999876 666544333

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.7e-36  Score=256.05  Aligned_cols=230  Identities=22%  Similarity=0.303  Sum_probs=194.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+..++...++...  +.++.++.+|+++.+++.++++.+.+.++++|++
T Consensus        15 lVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~l   92 (255)
T PRK06113         15 IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALSKLGKVDIL   92 (255)
T ss_pred             EEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888777777554  4578899999999999999999999988999999


Q ss_pred             EEccccCCC-CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFC-PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||||...+ ..+.+.+++++.+++|+.++++++++++|+|.+.+     .++||++||..+..+               
T Consensus        93 i~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~---------------  152 (255)
T PRK06113         93 VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-----GGVILTITSMAAENK---------------  152 (255)
T ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-----CcEEEEEecccccCC---------------
Confidence            999997643 23556688999999999999999999999997653     579999999887653               


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--h-HHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--A-VVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~-~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      .++...|+++|+|+++++++++.++...+  |+||+|+||+++|++....  + ......+..+...+.+|+|+++.++|
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  230 (255)
T PRK06113        153 NINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALF  230 (255)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            55667899999999999999999999998  9999999999999986543  1 11122233344556799999999999


Q ss_pred             HhcCCCccCCCceeec-cCc
Q 023054          237 VALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |++ +...+++|+.|. +++
T Consensus       231 l~~-~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        231 LCS-PAASWVSGQILTVSGG  249 (255)
T ss_pred             HcC-ccccCccCCEEEECCC
Confidence            996 788999999887 444

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=4.9e-37  Score=260.42  Aligned_cols=227  Identities=20%  Similarity=0.213  Sum_probs=184.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++++.+.    . +.++.++.+|+++.+++.++++++.+.++++|+|
T Consensus         9 lItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         9 LVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6999999999999999999999999999998776665432    1 3568899999999999999999999989999999


Q ss_pred             EEccccCCC---CCCCCC----CcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           81 INNAGIMFC---PYQISE----DGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      |||||+...   ..+.+.    ++|++.+++|+.+++.++++++|.|.+.      +|+||+++|..+..+         
T Consensus        84 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~~sS~~~~~~---------  148 (262)
T TIGR03325        84 IPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS------RGSVIFTISNAGFYP---------  148 (262)
T ss_pred             EECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc------CCCEEEEeccceecC---------
Confidence            999997532   112222    4688999999999999999999999764      478999999887653         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh------------HHHHHHHHHHh
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA------------VVMRFLKFFSF  221 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~------------~~~~~~~~~~~  221 (288)
                            .++...|++||+|+++|+++++.++++.   |+||+|+||+++|++.....            .........|.
T Consensus       149 ------~~~~~~Y~~sKaa~~~l~~~la~e~~~~---irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  219 (262)
T TIGR03325       149 ------NGGGPLYTAAKHAVVGLVKELAFELAPY---VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPI  219 (262)
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHhhccC---eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCC
Confidence                  4456789999999999999999999873   99999999999999864310            11112223466


Q ss_pred             hhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          222 FLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .++.+|+|+|+.++||++.+...++||+.+. |+|+
T Consensus       220 ~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       220 GRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             CCCCChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence            7788999999999999984356789999877 5443

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.7e-36  Score=255.18  Aligned_cols=231  Identities=25%  Similarity=0.275  Sum_probs=197.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.+++..+++....++.++.++.+|+++.++++++++.+.+.++++|+|
T Consensus        13 lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   92 (257)
T PRK09242         13 LITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHIL   92 (257)
T ss_pred             EEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999999888888888766556789999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++.+++|+.+++.++++++|+|.+++     .++||++||..+..+              
T Consensus        93 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~ii~~sS~~~~~~--------------  153 (257)
T PRK09242         93 VNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-----SSAIVNIGSVSGLTH--------------  153 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CceEEEECccccCCC--------------
Confidence            999998533  23567788999999999999999999999998754     579999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|+++|++++.++++++.++...+  |+||+|+||++.|++.....    .........+.....+|++++..+
T Consensus       154 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  230 (257)
T PRK09242        154 -VRSGAPYGMTKAALLQMTRNLAVEWAEDG--IRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAV  230 (257)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             55667899999999999999999999988  99999999999999875431    111122223445567999999999


Q ss_pred             HHHhcCCCccCCCceeeccC
Q 023054          235 CYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +||++ +...+++|+.+..+
T Consensus       231 ~~l~~-~~~~~~~g~~i~~~  249 (257)
T PRK09242        231 AFLCM-PAASYITGQCIAVD  249 (257)
T ss_pred             HHHhC-cccccccCCEEEEC
Confidence            99997 67788999987633

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-36  Score=262.90  Aligned_cols=228  Identities=24%  Similarity=0.233  Sum_probs=189.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA--AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||+++++.|+++|++|++++++.+  ..++..+.+...  +.++.++.+|++|.++++++++++.+.++++|
T Consensus        59 lITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  136 (300)
T PRK06128         59 LITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAVKELGGLD  136 (300)
T ss_pred             EEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHHHHhCCCC
Confidence            69999999999999999999999999887543  344555555543  45788999999999999999999999999999


Q ss_pred             eEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||+...   ..+.+.++|++++++|+.++++++++++|+|.+       +++||++||..+..+           
T Consensus       137 ~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~-----------  198 (300)
T PRK06128        137 ILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP-------GASIINTGSIQSYQP-----------  198 (300)
T ss_pred             EEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc-------CCEEEEECCccccCC-----------
Confidence            99999997532   335677899999999999999999999999864       479999999987653           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a  231 (288)
                          .+....|++||++++.|+++++.++..+|  |+||+|.||+++|++.....    ....+....+..++..|+|+|
T Consensus       199 ----~~~~~~Y~asK~a~~~~~~~la~el~~~g--I~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva  272 (300)
T PRK06128        199 ----SPTLLDYASTKAAIVAFTKALAKQVAEKG--IRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMA  272 (300)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHH
Confidence                45667899999999999999999999999  99999999999999864321    111122233556677999999


Q ss_pred             HHHHHHhcCCCccCCCceeeccCc
Q 023054          232 ATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      ..++||++ +...+++|+.|..++
T Consensus       273 ~~~~~l~s-~~~~~~~G~~~~v~g  295 (300)
T PRK06128        273 PLYVLLAS-QESSYVTGEVFGVTG  295 (300)
T ss_pred             HHHHHHhC-ccccCccCcEEeeCC
Confidence            99999997 678899999887443

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-36  Score=255.21  Aligned_cols=233  Identities=24%  Similarity=0.277  Sum_probs=192.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|+ .+..+...+++...  +.++.++.+|++|.++++++++.+.+.++++|+
T Consensus        11 lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   88 (261)
T PRK08936         11 VITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV   88 (261)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999885 44555666666554  467889999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      +|||||...+  ..+.+.++|++++++|+.+++.+++.++++|.+...    .++||++||..+..              
T Consensus        89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~----~g~iv~~sS~~~~~--------------  150 (261)
T PRK08936         89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI----KGNIINMSSVHEQI--------------  150 (261)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEEccccccC--------------
Confidence            9999998654  235667889999999999999999999999987431    47999999987654              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                       +.++...|+++|+|+..+++.++.++...+  |+||+|+||+++|++....    ..........+..++.+|+++++.
T Consensus       151 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  227 (261)
T PRK08936        151 -PWPLFVHYAASKGGVKLMTETLAMEYAPKG--IRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAV  227 (261)
T ss_pred             -CCCCCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence             356778999999999999999999999998  9999999999999986432    111122233455667899999999


Q ss_pred             HHHHhcCCCccCCCceeeccCccC
Q 023054          234 TCYVALHPNLKGVTGKYFLDCNEM  257 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~~~~  257 (288)
                      ++||++ +...+++|+++..++..
T Consensus       228 ~~~l~s-~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        228 AAWLAS-SEASYVTGITLFADGGM  250 (261)
T ss_pred             HHHHcC-cccCCccCcEEEECCCc
Confidence            999997 67889999977744333

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-36  Score=253.06  Aligned_cols=231  Identities=18%  Similarity=0.201  Sum_probs=190.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.+++..+.+...  +.++.++++|++|+++++++++++.+.++++|+|
T Consensus         5 lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (252)
T PRK07677          5 IITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDAL   82 (252)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEE
Confidence            69999999999999999999999999999998888777766544  3578999999999999999999999989999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++++++|+.++++++++++|+|.+...    .++||++||..+..+              
T Consensus        83 I~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~g~ii~isS~~~~~~--------------  144 (252)
T PRK07677         83 INNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI----KGNIINMVATYAWDA--------------  144 (252)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC----CEEEEEEcChhhccC--------------
Confidence            999996432  236677889999999999999999999999865321    479999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcc-cCCceEEEEeeCCcccCCC-CCC----ChHHHHHHHHHHhhhcCChHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQE-EGVNITANSVHPGLIMTNL-FKH----SAVVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~~~~i~v~~v~PG~v~t~~-~~~----~~~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                       .+....|++||+|+++|++.|+.++.+ .|  |+||+|+||+++|+. ...    ........+..+..++.+|+++|+
T Consensus       145 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~~g--i~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  221 (252)
T PRK07677        145 -GPGVIHSAAAKAGVLAMTRTLAVEWGRKYG--IRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAG  221 (252)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhCcccC--eEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHH
Confidence             345678999999999999999999975 57  999999999999543 221    111122233345566789999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCc
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      .+.||++ +...+++|+.+. +++
T Consensus       222 ~~~~l~~-~~~~~~~g~~~~~~gg  244 (252)
T PRK07677        222 LAYFLLS-DEAAYINGTCITMDGG  244 (252)
T ss_pred             HHHHHcC-ccccccCCCEEEECCC
Confidence            9999997 678899999876 444

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=3.7e-36  Score=252.92  Aligned_cols=230  Identities=23%  Similarity=0.262  Sum_probs=188.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||.++|++|+++|++|++++|+..  ++..+.+...  +.++.++.+|+++.+++..+++++.+.++++|++
T Consensus         9 lItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   84 (248)
T TIGR01832         9 LVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEEFGHIDIL   84 (248)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999763  3344444433  4568999999999999999999999888899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++.+++|+.+++.++++++|.|.++..    .++||++||..+..+              
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~g~iv~~sS~~~~~~--------------  146 (248)
T TIGR01832        85 VNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR----GGKIINIASMLSFQG--------------  146 (248)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC----CeEEEEEecHHhccC--------------
Confidence            999998654  235566789999999999999999999999976421    379999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .+....|+++|+++.+++++++.++.++|  |+||+|+||++.|++.....    ......+..+..++.+|+|+|+.+
T Consensus       147 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  223 (248)
T TIGR01832       147 -GIRVPSYTASKHGVAGLTKLLANEWAAKG--INVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPA  223 (248)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhCccC--cEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             34557899999999999999999999988  99999999999999865321    111223344556778999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +...+++|+++. |+|.
T Consensus       224 ~~l~s-~~~~~~~G~~i~~dgg~  245 (248)
T TIGR01832       224 VFLAS-SASDYVNGYTLAVDGGW  245 (248)
T ss_pred             HHHcC-ccccCcCCcEEEeCCCE
Confidence            99997 778899999887 5543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-36  Score=253.90  Aligned_cols=229  Identities=22%  Similarity=0.278  Sum_probs=195.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|++++.++..+.+...  +.++.++.+|++|.++++++++.+.+.++++|+|
T Consensus        14 lItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   91 (255)
T PRK07523         14 LVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDIL   91 (255)
T ss_pred             EEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999998888777777654  4568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++++++|+.+++.+++++.++|.++.     .++||++||..+..               
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~iss~~~~~---------------  151 (255)
T PRK07523         92 VNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-----AGKIINIASVQSAL---------------  151 (255)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-----CeEEEEEccchhcc---------------
Confidence            999998643  23567788999999999999999999999998754     58999999987654               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                      +.++...|+++|++++.++++++.+++..|  |+||+|.||++.|++.....    .........+..++..|+|+|+.+
T Consensus       152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  229 (255)
T PRK07523        152 ARPGIAPYTATKGAVGNLTKGMATDWAKHG--LQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGAC  229 (255)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            256678899999999999999999999999  99999999999999865321    112223334556678899999999


Q ss_pred             HHHhcCCCccCCCceeeccC
Q 023054          235 CYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +||++ +...+++|+.+..+
T Consensus       230 ~~l~~-~~~~~~~G~~i~~~  248 (255)
T PRK07523        230 VFLAS-DASSFVNGHVLYVD  248 (255)
T ss_pred             HHHcC-chhcCccCcEEEEC
Confidence            99997 67889999977643

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-36  Score=254.41  Aligned_cols=227  Identities=22%  Similarity=0.247  Sum_probs=183.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||+++|+.|+++|++|++++++.+...   +++...    ++.++.+|++|+++++++++++.+.++++|+|
T Consensus        11 lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463         11 LITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK----GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC----CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999877654322   222221    47889999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++++++|+.+++.+++.++|.|.+++     .++||++||..+...              
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~g~iv~isS~~~~~~--------------  144 (255)
T PRK06463         84 VNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-----NGAIVNIASNAGIGT--------------  144 (255)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcCHHhCCC--------------
Confidence            999998643  23567788999999999999999999999998654     589999999887532              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------HHHHHHHHHHhhhcCChHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------VVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a  231 (288)
                      ..++...|++||+|+++|+++++.++++.|  |+||+|+||+++|++.....       ....+....+..++.+|+++|
T Consensus       145 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  222 (255)
T PRK06463        145 AAEGTTFYAITKAGIIILTRRLAFELGKYG--IRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIA  222 (255)
T ss_pred             CCCCccHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHH
Confidence            134557899999999999999999999998  99999999999999864321       011122223445567999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCcc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.++||++ +...+++|+.+. ++|.
T Consensus       223 ~~~~~l~s-~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        223 NIVLFLAS-DDARYITGQVIVADGGR  247 (255)
T ss_pred             HHHHHHcC-hhhcCCCCCEEEECCCe
Confidence            99999997 778899999887 5544

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-36  Score=253.91  Aligned_cols=230  Identities=17%  Similarity=0.252  Sum_probs=194.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+.+...  +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus        14 lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   91 (265)
T PRK07097         14 LITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDIL   91 (265)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            69999999999999999999999999999998888877777654  4578999999999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++++++|+.+++.+++.++|+|.+..     .++||++||..+..+              
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  152 (265)
T PRK07097         92 VNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-----HGKIINICSMMSELG--------------  152 (265)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcCccccCC--------------
Confidence            999998654  23566788999999999999999999999998754     689999999887652              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----------HHHHHHHHHHhhhcCChH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----------VVMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~  228 (288)
                       .++...|+++|++++.++++++.++.+.|  |+||+|+||++.|++.....          .........+...+.+|+
T Consensus       153 -~~~~~~Y~~sKaal~~l~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (265)
T PRK07097        153 -RETVSAYAAAKGGLKMLTKNIASEYGEAN--IQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPE  229 (265)
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHH
Confidence             45678899999999999999999999999  99999999999999764321          111112223445677899


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |+|..++|+++ +...+++|+.+. +++
T Consensus       230 dva~~~~~l~~-~~~~~~~g~~~~~~gg  256 (265)
T PRK07097        230 DLAGPAVFLAS-DASNFVNGHILYVDGG  256 (265)
T ss_pred             HHHHHHHHHhC-cccCCCCCCEEEECCC
Confidence            99999999997 678899999876 444

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-36  Score=253.33  Aligned_cols=226  Identities=22%  Similarity=0.212  Sum_probs=183.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|++. .++..+++...  +.++.++.+|+++.+++.++++++.+.++++|+|
T Consensus        12 lVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   88 (260)
T PRK12823         12 VVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEAFGRIDVL   88 (260)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            69999999999999999999999999999853 44455555443  4568899999999999999999999999999999


Q ss_pred             EEccccCC---CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||...   +..+.+.++++..+++|+.+++.+++.++|.|.+.+     .++||++||..+..              
T Consensus        89 v~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~--------------  149 (260)
T PRK12823         89 INNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-----GGAIVNVSSIATRG--------------  149 (260)
T ss_pred             EECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCeEEEEcCccccC--------------
Confidence            99999642   234667788999999999999999999999998754     57999999987531              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-----------hHHHH----HHHHHHhh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-----------AVVMR----FLKFFSFF  222 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-----------~~~~~----~~~~~~~~  222 (288)
                         ....+|++||+|++.|+++++.+++.+|  |+||+|+||++.|++....           .....    .....+..
T Consensus       150 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (260)
T PRK12823        150 ---INRVPYSAAKGGVNALTASLAFEYAEHG--IRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK  224 (260)
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc
Confidence               2345799999999999999999999988  9999999999999863210           00111    11123445


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++.+|+|+|+.++||++ +...+++|+.+..+
T Consensus       225 ~~~~~~dva~~~~~l~s-~~~~~~~g~~~~v~  255 (260)
T PRK12823        225 RYGTIDEQVAAILFLAS-DEASYITGTVLPVG  255 (260)
T ss_pred             cCCCHHHHHHHHHHHcC-cccccccCcEEeec
Confidence            56789999999999997 67889999987743

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=8.3e-36  Score=252.04  Aligned_cols=233  Identities=22%  Similarity=0.235  Sum_probs=193.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|+++.+ +.+..++..+++...  +.++.++.+|+++.++++++++++.+.++++|+
T Consensus         6 lItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12743          6 IVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV   83 (256)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999998865 556666666666554  567899999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||....  ..+.+.+++++.+++|+.+++.++++++++|.++..    .++||++||..+..+             
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~g~ii~isS~~~~~~-------------  146 (256)
T PRK12743         84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ----GGRIINITSVHEHTP-------------  146 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CeEEEEEeeccccCC-------------
Confidence            9999998654  235677889999999999999999999999976421    479999999876653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|+++|+++.+++++++.++..++  |+||+|+||+++|++.......  .......+..+..+|+|+|+.++
T Consensus       147 --~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  222 (256)
T PRK12743        147 --LPGASAYTAAKHALGGLTKAMALELVEHG--ILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVA  222 (256)
T ss_pred             --CCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence              56678999999999999999999999998  9999999999999986533111  11222334456679999999999


Q ss_pred             HHhcCCCccCCCceeec-cCccC
Q 023054          236 YVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+++ +...+++|+++. ++|..
T Consensus       223 ~l~~-~~~~~~~G~~~~~dgg~~  244 (256)
T PRK12743        223 WLCS-EGASYTTGQSLIVDGGFM  244 (256)
T ss_pred             HHhC-ccccCcCCcEEEECCCcc
Confidence            9996 788899999887 55543

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-36  Score=252.99  Aligned_cols=228  Identities=21%  Similarity=0.232  Sum_probs=189.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+++++..+++.... +.++.++.+|++++++++++++.    ++++|++
T Consensus        11 lItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~----~g~id~l   85 (259)
T PRK06125         11 LITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE----AGDIDIL   85 (259)
T ss_pred             EEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH----hCCCCEE
Confidence            689999999999999999999999999999988888777776543 45688999999999999988764    4789999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++++++|+.+++.++++++|.|.+++     .++||++||..+..+              
T Consensus        86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~iss~~~~~~--------------  146 (259)
T PRK06125         86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-----SGVIVNVIGAAGENP--------------  146 (259)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEecCccccCC--------------
Confidence            999998643  34677889999999999999999999999998754     579999999876542              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC------------hHHHHHHHHHHhhhcCC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS------------AVVMRFLKFFSFFLWKN  226 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~------------~~~~~~~~~~~~~~~~~  226 (288)
                       .+....|+++|+|+.+|+++++.++.+.|  |+||+|+||+++|++....            .....+....+..++.+
T Consensus       147 -~~~~~~y~ask~al~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (259)
T PRK06125        147 -DADYICGSAGNAALMAFTRALGGKSLDDG--VRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPAT  223 (259)
T ss_pred             -CCCchHhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcC
Confidence             44567799999999999999999999999  9999999999999964321            00111222334556779


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+|+.++||++ +...+++|+.+. ++|.
T Consensus       224 ~~~va~~~~~l~~-~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        224 PEEVADLVAFLAS-PRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             HHHHHHHHHHHcC-chhccccCceEEecCCe
Confidence            9999999999996 788999999887 4443

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-36  Score=260.27  Aligned_cols=230  Identities=16%  Similarity=0.149  Sum_probs=172.1

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh--------hCCCC-----ceEEEEecCCCh-----
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILK--------EDDTA-----RVDTLKLDLSSI-----   60 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~-----~~~~~~~Dl~~~-----   60 (288)
                      |||||+  +|||+++|+.|+++|++|++.++.+ .++...+....        ...+.     ++..+.+|+++.     
T Consensus        12 lITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~~   90 (299)
T PRK06300         12 FIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVPE   90 (299)
T ss_pred             EEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEeec
Confidence            699996  9999999999999999999987642 11111111000        00011     111122333333     


Q ss_pred             -------------HHHHHHHHHHHhcCCCcceEEEccccCC----CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHh
Q 023054           61 -------------ASIKDFAQNFIALNLPLNILINNAGIMF----CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT  123 (288)
Q Consensus        61 -------------~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  123 (288)
                                   .+++++++++.+.++++|+||||||...    +..+.+.++|++.+++|+.++++++++++|+|.+ 
T Consensus        91 ~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~-  169 (299)
T PRK06300         91 EIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP-  169 (299)
T ss_pred             ccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-
Confidence                         3689999999999999999999998643    2347788999999999999999999999999965 


Q ss_pred             hccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCccc-cchhhHHHHHHHHHHHHHHhcc-cCCceEEEEeeCCcc
Q 023054          124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKK-AYGQSKLANILHANELSRRFQE-EGVNITANSVHPGLI  201 (288)
Q Consensus       124 ~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~~~~~-~~~~i~v~~v~PG~v  201 (288)
                            .|+||+++|..+..+               .+... .|++||+|+.+|+++|+.|+++ +|  |+||+|+||++
T Consensus       170 ------~G~ii~iss~~~~~~---------------~p~~~~~Y~asKaAl~~lt~~la~el~~~~g--IrVn~V~PG~v  226 (299)
T PRK06300        170 ------GGSTISLTYLASMRA---------------VPGYGGGMSSAKAALESDTKVLAWEAGRRWG--IRVNTISAGPL  226 (299)
T ss_pred             ------CCeEEEEeehhhcCc---------------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEEEEeCCc
Confidence                  479999999887653               44443 7999999999999999999987 48  99999999999


Q ss_pred             cCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          202 MTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       202 ~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .|++.....    .........+..+..+|+++|..++||++ +...++||+.+. +++.
T Consensus       227 ~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s-~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        227 ASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVS-PLASAITGETLYVDHGA  285 (299)
T ss_pred             cChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECCCc
Confidence            999865321    11112223344566799999999999997 788999999877 4443

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.1e-35  Score=254.62  Aligned_cols=230  Identities=21%  Similarity=0.187  Sum_probs=188.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++..+++..   +.++.++++|++|.++++++++.+.+.++++|+|
T Consensus        22 lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~l   98 (280)
T PLN02253         22 LVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIM   98 (280)
T ss_pred             EEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6999999999999999999999999999998777766665521   3568999999999999999999999999999999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||....    ..+.+.++++.++++|+.++++++++++|.|.+..     .|+||+++|..+..+            
T Consensus        99 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~ii~isS~~~~~~------------  161 (280)
T PLN02253         99 VNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-----KGSIVSLCSVASAIG------------  161 (280)
T ss_pred             EECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-----CceEEEecChhhccc------------
Confidence            999998642    23567788999999999999999999999997654     589999999987653            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHH----HHHHH-----hhh
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRF----LKFFS-----FFL  223 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~----~~~~~-----~~~  223 (288)
                         .+....|++||++++.+++.++.+++..+  |+||+|+||++.|++....    ......    .....     ...
T Consensus       162 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  236 (280)
T PLN02253        162 ---GLGPHAYTGSKHAVLGLTRSVAAELGKHG--IRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGV  236 (280)
T ss_pred             ---CCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCC
Confidence               34556899999999999999999999998  9999999999999875321    000111    11111     123


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ..+|+|+|+.++||++ +...+++|+.+. ++|.
T Consensus       237 ~~~~~dva~~~~~l~s-~~~~~i~G~~i~vdgG~  269 (280)
T PLN02253        237 ELTVDDVANAVLFLAS-DEARYISGLNLMIDGGF  269 (280)
T ss_pred             CCCHHHHHHHHHhhcC-cccccccCcEEEECCch
Confidence            4689999999999997 778899999776 5543

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.4e-35  Score=249.13  Aligned_cols=208  Identities=17%  Similarity=0.186  Sum_probs=176.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||+++|++|+ +|++|++++|+.++++++.+++...+ ..++.+++||++|.++++++++++.+.++++|++
T Consensus         4 lItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l   81 (246)
T PRK05599          4 LILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEISLA   81 (246)
T ss_pred             EEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEE
Confidence            699999999999999999 59999999999999998888886653 3458899999999999999999999989999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.+.+.+.+++|+.+++.+++.++|.|.++..    +|+||++||.++..+              
T Consensus        82 v~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~----~g~Iv~isS~~~~~~--------------  143 (246)
T PRK05599         82 VVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTA----PAAIVAFSSIAGWRA--------------  143 (246)
T ss_pred             EEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC----CCEEEEEeccccccC--------------
Confidence            9999986442  23455567788999999999999999999976421    489999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|++||+|+.+|+++++.+++.+|  |+||+|+||+++|++......         .....+|+++|+.+++++
T Consensus       144 -~~~~~~Y~asKaa~~~~~~~la~el~~~~--I~v~~v~PG~v~T~~~~~~~~---------~~~~~~pe~~a~~~~~~~  211 (246)
T PRK05599        144 -RRANYVYGSTKAGLDAFCQGLADSLHGSH--VRLIIARPGFVIGSMTTGMKP---------APMSVYPRDVAAAVVSAI  211 (246)
T ss_pred             -CcCCcchhhHHHHHHHHHHHHHHHhcCCC--ceEEEecCCcccchhhcCCCC---------CCCCCCHHHHHHHHHHHH
Confidence             45678899999999999999999999988  999999999999998654311         112358999999999999


Q ss_pred             cC
Q 023054          239 LH  240 (288)
Q Consensus       239 ~~  240 (288)
                      ..
T Consensus       212 ~~  213 (246)
T PRK05599        212 TS  213 (246)
T ss_pred             hc
Confidence            73

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-35  Score=250.66  Aligned_cols=227  Identities=22%  Similarity=0.230  Sum_probs=189.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+..++..+.+     ..++.++.+|++|.++++++++++.+.++++|+|
T Consensus        10 lItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067         10 LLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             EEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998877766554     3458899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++++.++++|+.+++.+++++++.|.++..    +++||++||..+..+              
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~~~iv~~sS~~~~~~--------------  146 (257)
T PRK07067         85 FNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR----GGKIINMASQAGRRG--------------  146 (257)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC----CcEEEEeCCHHhCCC--------------
Confidence            999997643  335567889999999999999999999999976421    479999999876653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------------HHHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------------VVMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~~~~  225 (288)
                       .++...|++||++++.+++.++.++..+|  |+||+|.||+++|++.....             ....+....+...+.
T Consensus       147 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (257)
T PRK07067        147 -EALVSHYCATKAAVISYTQSAALALIRHG--INVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMG  223 (257)
T ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhcccC--eEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCcc
Confidence             56778999999999999999999999988  99999999999999754321             000111223455677


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +|+|+|+.++||++ +...+++|+.+..+
T Consensus       224 ~~~dva~~~~~l~s-~~~~~~~g~~~~v~  251 (257)
T PRK07067        224 VPDDLTGMALFLAS-ADADYIVAQTYNVD  251 (257)
T ss_pred             CHHHHHHHHHHHhC-cccccccCcEEeec
Confidence            99999999999997 67889999987743

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=249.53  Aligned_cols=227  Identities=26%  Similarity=0.326  Sum_probs=189.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.... +...++.    +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus        19 lItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   93 (255)
T PRK06841         19 VVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL----GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL   93 (255)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh----CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6999999999999999999999999999987643 2223321    3457789999999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++++++|+.+++.+++.+.|+|.++.     .++||++||..+..+              
T Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~--------------  154 (255)
T PRK06841         94 VNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-----GGKIVNLASQAGVVA--------------  154 (255)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-----CceEEEEcchhhccC--------------
Confidence            999998643  22456778999999999999999999999998754     589999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                       .+....|+++|++++.++++++.+++++|  |+||+|+||+++|++....   .......+..+..++.+|+++|+.++
T Consensus       155 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  231 (255)
T PRK06841        155 -LERHVAYCASKAGVVGMTKVLALEWGPYG--ITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAAL  231 (255)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             55678899999999999999999999998  9999999999999986532   11122333445667789999999999


Q ss_pred             HHhcCCCccCCCceeec-cCc
Q 023054          236 YVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|++ +...+++|+.+. ++|
T Consensus       232 ~l~~-~~~~~~~G~~i~~dgg  251 (255)
T PRK06841        232 FLAS-DAAAMITGENLVIDGG  251 (255)
T ss_pred             HHcC-ccccCccCCEEEECCC
Confidence            9997 788999999887 444

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-36  Score=259.45  Aligned_cols=218  Identities=21%  Similarity=0.228  Sum_probs=183.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+++.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   88 (330)
T PRK06139         11 VITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAASFGGRIDVW   88 (330)
T ss_pred             EEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999998888887654  4678889999999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++.+++|+.+++.+++.++|+|.++.     .|+||++||..+..+              
T Consensus        89 VnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-----~g~iV~isS~~~~~~--------------  149 (330)
T PRK06139         89 VNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-----HGIFINMISLGGFAA--------------  149 (330)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-----CCEEEEEcChhhcCC--------------
Confidence            999998644  33667788999999999999999999999998765     589999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccc-CCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEE-GVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~-~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                       .+....|++||+++.+|+++|+.|+... +  |+|++|+||+++|++......... ....+.....+|+++|+.++++
T Consensus       150 -~p~~~~Y~asKaal~~~~~sL~~El~~~~g--I~V~~v~Pg~v~T~~~~~~~~~~~-~~~~~~~~~~~pe~vA~~il~~  225 (330)
T PRK06139        150 -QPYAAAYSASKFGLRGFSEALRGELADHPD--IHVCDVYPAFMDTPGFRHGANYTG-RRLTPPPPVYDPRRVAKAVVRL  225 (330)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhCCCCC--eEEEEEecCCccCccccccccccc-ccccCCCCCCCHHHHHHHHHHH
Confidence             5667889999999999999999999864 7  999999999999998753211000 0111223356899999999999


Q ss_pred             hcCCCc
Q 023054          238 ALHPNL  243 (288)
Q Consensus       238 ~~~~~~  243 (288)
                      +.++..
T Consensus       226 ~~~~~~  231 (330)
T PRK06139        226 ADRPRA  231 (330)
T ss_pred             HhCCCC
Confidence            975444

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=249.39  Aligned_cols=230  Identities=26%  Similarity=0.337  Sum_probs=195.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++.+++.++++++.+.++++|+|
T Consensus        15 lItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   92 (256)
T PRK06124         15 LVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARIDAEHGRLDIL   92 (256)
T ss_pred             EEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            68999999999999999999999999999998888877777654  4568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|....  ..+.+.++|++.+.+|+.+++.+++.+++.|.++.     .++||++||..+..+              
T Consensus        93 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~ss~~~~~~--------------  153 (256)
T PRK06124         93 VNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-----YGRIIAITSIAGQVA--------------  153 (256)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEeechhccC--------------
Confidence            999998654  23566788999999999999999999999997754     589999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|+++|+++..+++.++.+++..+  |+||+|+||+++|++....    ..........+...+.+|+++++.+
T Consensus       154 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  230 (256)
T PRK06124        154 -RAGDAVYPAAKQGLTGLMRALAAEFGPHG--ITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAA  230 (256)
T ss_pred             -CCCccHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence             55678999999999999999999999888  9999999999999975432    1111222333455678999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +||++ +...+++|+++. ++|
T Consensus       231 ~~l~~-~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        231 VFLAS-PAASYVNGHVLAVDGG  251 (256)
T ss_pred             HHHcC-cccCCcCCCEEEECCC
Confidence            99997 778899999887 444

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=251.21  Aligned_cols=231  Identities=22%  Similarity=0.286  Sum_probs=188.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.. ..+..+++...  +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus        10 lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~v   86 (263)
T PRK08226         10 LITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKEGRIDIL   86 (263)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999875 34444445433  4568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++.+++|+.+++.+++.++|+|.+..     .++||++||..+...              
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~--------------  147 (263)
T PRK08226         87 VNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-----DGRIVMMSSVTGDMV--------------  147 (263)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CcEEEEECcHHhccc--------------
Confidence            999998543  23556678899999999999999999999987654     579999999876321              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----------HHHHHHHHHHhhhcCChH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----------VVMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~  228 (288)
                      +.++...|+++|+++++++++++.++..++  |+||+|+||++.|++.....          ....+.+..|..++.+|+
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  225 (263)
T PRK08226        148 ADPGETAYALTKAAIVGLTKSLAVEYAQSG--IRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPL  225 (263)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHH
Confidence            234567899999999999999999999888  99999999999999864321          111122223445567999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++|+.++||++ +.+.+++|+.+. |+|.
T Consensus       226 ~va~~~~~l~~-~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        226 EVGELAAFLAS-DESSYLTGTQNVIDGGS  253 (263)
T ss_pred             HHHHHHHHHcC-chhcCCcCceEeECCCc
Confidence            99999999997 778899999877 5553

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.2e-37  Score=232.56  Aligned_cols=224  Identities=23%  Similarity=0.269  Sum_probs=190.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ++||+..|||+++++.|++.|++|+.+.|+++.+..+.++.     ..-++.++.|+++++.+.+++.    ..+.+|.+
T Consensus        11 lvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~----~v~pidgL   81 (245)
T KOG1207|consen   11 LVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLV----PVFPIDGL   81 (245)
T ss_pred             EeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhc----ccCchhhh
Confidence            58999999999999999999999999999999988877765     4558999999999777666544    34689999


Q ss_pred             EEccccCC--CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMF--CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+.-  +..+++.+.|++.|++|+.+.+...|....-+..+..    +|.||++||.++.++              
T Consensus        82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~----~GaIVNvSSqas~R~--------------  143 (245)
T KOG1207|consen   82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI----KGAIVNVSSQASIRP--------------  143 (245)
T ss_pred             hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC----CceEEEecchhcccc--------------
Confidence            99999864  4558899999999999999999999996665543321    688999999998874              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       ....+.||++|+|+.+++|+++.|+++++  ||||+|.|-.+.|+|.++.    ......+..+|..++...+++.+++
T Consensus       144 -~~nHtvYcatKaALDmlTk~lAlELGp~k--IRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~  220 (245)
T KOG1207|consen  144 -LDNHTVYCATKAALDMLTKCLALELGPQK--IRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAV  220 (245)
T ss_pred             -cCCceEEeecHHHHHHHHHHHHHhhCcce--eEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhh
Confidence             77889999999999999999999999999  9999999999999997754    2223355567888888999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +||+| +.+++.||..+. ++|
T Consensus       221 lfLLS-d~ssmttGstlpveGG  241 (245)
T KOG1207|consen  221 LFLLS-DNSSMTTGSTLPVEGG  241 (245)
T ss_pred             eeeee-cCcCcccCceeeecCC
Confidence            99998 889999999886 444

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=3.5e-35  Score=245.62  Aligned_cols=228  Identities=19%  Similarity=0.211  Sum_probs=189.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|+ .+..+...+++...  +.++.++.+|++|.+++.++++++.+.++++|+
T Consensus         2 lItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         2 LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999998865 45566666666554  457899999999999999999998888899999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhH-HHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLL-DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +|||+|.....  .+.+.++|+.++++|+.+++++++.++ |.+.+.+     .++||++||..+..+            
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~~iv~vsS~~~~~~------------  142 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-----GGRIITLASVSGVMG------------  142 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-----CeEEEEEcchhhccC------------
Confidence            99999986542  245678899999999999999999875 5554433     579999999987763            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-HHHHHHHHHhhhcCChHHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-VMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                         .++...|+++|+++..++++++.++..+|  |+||+|+||+++|++...... .....+..+..++.+|+++|+.++
T Consensus       143 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  217 (239)
T TIGR01831       143 ---NRGQVNYSAAKAGLIGATKALAVELAKRK--ITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAG  217 (239)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence               55678899999999999999999999988  999999999999999865422 112333345566789999999999


Q ss_pred             HHhcCCCccCCCceeecc
Q 023054          236 YVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~  253 (288)
                      ||++ +...+++|..+..
T Consensus       218 ~l~~-~~~~~~~g~~~~~  234 (239)
T TIGR01831       218 FLMS-DGASYVTRQVISV  234 (239)
T ss_pred             HHcC-chhcCccCCEEEe
Confidence            9997 7789999998763

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-35  Score=244.86  Aligned_cols=212  Identities=16%  Similarity=0.127  Sum_probs=177.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC-Ccce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL-PLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~   79 (288)
                      +||||++|||++++++|+++|++|++++|+++.++++.+++...  +.++..+.+|+++.++++++++++.+.++ ++|+
T Consensus         9 lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~   86 (227)
T PRK08862          9 LITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDV   86 (227)
T ss_pred             EEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCE
Confidence            69999999999999999999999999999999998888887654  35678889999999999999999999888 8999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +|||||....   ..+.+.++|.+.+.+|+.+++.+++.++|+|.+++.    +|+||++||..+               
T Consensus        87 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~----~g~Iv~isS~~~---------------  147 (227)
T PRK08862         87 LVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK----KGVIVNVISHDD---------------  147 (227)
T ss_pred             EEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CceEEEEecCCC---------------
Confidence            9999986432   235566788999999999999999999999986421    589999999653               


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                         .++...|+++|+|+.+|+++++.++++.|  |+||+|+||+++|+..... .  .+...        .++++..+.|
T Consensus       148 ---~~~~~~Y~asKaal~~~~~~la~el~~~~--Irvn~v~PG~i~t~~~~~~-~--~~~~~--------~~~~~~~~~~  211 (227)
T PRK08862        148 ---HQDLTGVESSNALVSGFTHSWAKELTPFN--IRVGGVVPSIFSANGELDA-V--HWAEI--------QDELIRNTEY  211 (227)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcCcCCCccCH-H--HHHHH--------HHHHHhheeE
Confidence               33467899999999999999999999998  9999999999999843211 1  11110        1899999999


Q ss_pred             HhcCCCccCCCceeec
Q 023054          237 VALHPNLKGVTGKYFL  252 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~  252 (288)
                      |++   ..++||+.+.
T Consensus       212 l~~---~~~~tg~~~~  224 (227)
T PRK08862        212 IVA---NEYFSGRVVE  224 (227)
T ss_pred             EEe---cccccceEEe
Confidence            995   5699998764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=3.3e-35  Score=245.41  Aligned_cols=224  Identities=20%  Similarity=0.187  Sum_probs=179.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+++...   +.+...    .+.++.+|++|.++++++++.+.+.++++|++
T Consensus         6 lItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          6 LITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             EEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence            69999999999999999999999999999876432   223222    26788999999999999999999989999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++.+++|+.+++.+++.++|.|.+...   ..++||++||..+..               
T Consensus        79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~---~~g~iv~~ss~~~~~---------------  140 (236)
T PRK06483         79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH---AASDIIHITDYVVEK---------------  140 (236)
T ss_pred             EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC---CCceEEEEcchhhcc---------------
Confidence            999997543  234567889999999999999999999999976421   137899999987654               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                      +.+....|++||+++++|+++++.++++ +  |+||+|+||++.|+...............+..+...|+|+|+.+.||+
T Consensus       141 ~~~~~~~Y~asKaal~~l~~~~a~e~~~-~--irvn~v~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  217 (236)
T PRK06483        141 GSDKHIAYAASKAALDNMTLSFAAKLAP-E--VKVNSIAPALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYLL  217 (236)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHCC-C--cEEEEEccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHHHHHh
Confidence            2556788999999999999999999987 4  999999999998865322211112222334556679999999999999


Q ss_pred             cCCCccCCCceeec-cCc
Q 023054          239 LHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       239 ~~~~~~~~tG~~~~-~~~  255 (288)
                      +   ..++||+.+. ++|
T Consensus       218 ~---~~~~~G~~i~vdgg  232 (236)
T PRK06483        218 T---SCYVTGRSLPVDGG  232 (236)
T ss_pred             c---CCCcCCcEEEeCcc
Confidence            5   4789999876 444

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=244.24  Aligned_cols=207  Identities=16%  Similarity=0.158  Sum_probs=170.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||+++++.|+++|++|++++|+.+++++..+++       ++.++++|+++.++++++++.+.+   ++|+|
T Consensus         4 lItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id~l   73 (223)
T PRK05884          4 LVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLDTI   73 (223)
T ss_pred             EEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence            69999999999999999999999999999988777655543       356788999999999999887643   69999


Q ss_pred             EEccccCCC---C----CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           81 INNAGIMFC---P----YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        81 v~~ag~~~~---~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      |||||....   .    ...+.++|++++++|+.++++++++++|.|.+       .|+||++||..             
T Consensus        74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~-------------  133 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS-------GGSIISVVPEN-------------  133 (223)
T ss_pred             EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCeEEEEecCC-------------
Confidence            999985321   1    11145789999999999999999999999964       47999999975             


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHH
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                            .+....|++||+|+.+|+++++.+++++|  |+||+|+||+++|++.....       ..   ...+|+|+++.
T Consensus       134 ------~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~v~~v~PG~v~t~~~~~~~-------~~---p~~~~~~ia~~  195 (223)
T PRK05884        134 ------PPAGSAEAAIKAALSNWTAGQAAVFGTRG--ITINAVACGRSVQPGYDGLS-------RT---PPPVAAEIARL  195 (223)
T ss_pred             ------CCCccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccCchhhhhcc-------CC---CCCCHHHHHHH
Confidence                  12346899999999999999999999999  99999999999998643211       11   12489999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++||++ +.+.+++|+.+. ++|.
T Consensus       196 ~~~l~s-~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        196 ALFLTT-PAARHITGQTLHVSHGA  218 (223)
T ss_pred             HHHHcC-chhhccCCcEEEeCCCe
Confidence            999997 788999999876 4544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4e-35  Score=247.22  Aligned_cols=227  Identities=21%  Similarity=0.224  Sum_probs=183.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC-cc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP-LN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-id   78 (288)
                      |||||++|||+++|+.|+++|++|+++.+ +.+..+....++     +.++.++.+|+++.++++++++++.+.+++ +|
T Consensus         9 lItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          9 LVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             EEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            69999999999999999999999988765 444444443332     356889999999999999999999888877 99


Q ss_pred             eEEEccccCC--------CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcc
Q 023054           79 ILINNAGIMF--------CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIR  150 (288)
Q Consensus        79 ~lv~~ag~~~--------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  150 (288)
                      ++|||||...        +..+.+.+++++.+++|+.+++.+++.++|.|.+..     .++||++||..+..       
T Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~iss~~~~~-------  151 (253)
T PRK08642         84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-----FGRIINIGTNLFQN-------  151 (253)
T ss_pred             EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-----CeEEEEECCccccC-------
Confidence            9999998642        123556678899999999999999999999997654     58999999976543       


Q ss_pred             ccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCCh
Q 023054          151 FQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       151 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~  227 (288)
                              ...+...|+++|+++++++++++++++..|  |+||+|+||+++|+......   .........+...+.+|
T Consensus       152 --------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (253)
T PRK08642        152 --------PVVPYHDYTTAKAALLGLTRNLAAELGPYG--ITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTP  221 (253)
T ss_pred             --------CCCCccchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCH
Confidence                    234567899999999999999999999999  99999999999998654321   11122233455667899


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|+|+.++||++ +...+++|+.|. ++|
T Consensus       222 ~~va~~~~~l~~-~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        222 QEFADAVLFFAS-PWARAVTGQNLVVDGG  249 (253)
T ss_pred             HHHHHHHHHHcC-chhcCccCCEEEeCCC
Confidence            999999999997 778899999776 544

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-35  Score=250.80  Aligned_cols=233  Identities=18%  Similarity=0.209  Sum_probs=189.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-------HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-------ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.       +++..+++...  +.++.++.+|+++.+++.++++++.+.
T Consensus        10 lItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   87 (273)
T PRK08278         10 FITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAAAVAKAVER   87 (273)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            699999999999999999999999999997643       34444555443  457899999999999999999999988


Q ss_pred             CCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           74 NLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      ++++|+||||||+...  ..+.+.+++++++++|+.+++.++++++|+|.++.     .++|+++||..+..+.      
T Consensus        88 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-----~g~iv~iss~~~~~~~------  156 (273)
T PRK08278         88 FGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-----NPHILTLSPPLNLDPK------  156 (273)
T ss_pred             hCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-----CCEEEEECCchhcccc------
Confidence            8999999999998543  23566788999999999999999999999998754     5799999997654320      


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCC-cccCCCCCCChHHHHHHHHHHhhhcCChHHH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPG-LIMTNLFKHSAVVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
                             ..++...|++||++++.++++++.++++++  |+||+|+|| +++|++.......     ..+...+.+|+++
T Consensus       157 -------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~--I~v~~i~Pg~~i~t~~~~~~~~~-----~~~~~~~~~p~~v  222 (273)
T PRK08278        157 -------WFAPHTAYTMAKYGMSLCTLGLAEEFRDDG--IAVNALWPRTTIATAAVRNLLGG-----DEAMRRSRTPEIM  222 (273)
T ss_pred             -------ccCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeCCCccccHHHHhcccc-----cccccccCCHHHH
Confidence                   015668999999999999999999999988  999999999 6888765433110     1122346799999


Q ss_pred             HHHHHHHhcCCCccCCCceeeccCccCCCCc
Q 023054          231 AATTCYVALHPNLKGVTGKYFLDCNEMPPSA  261 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~~~~~~~~~~  261 (288)
                      |+.++++++ +...+++|+++.|.++.....
T Consensus       223 a~~~~~l~~-~~~~~~~G~~~~~~~~~~~~~  252 (273)
T PRK08278        223 ADAAYEILS-RPAREFTGNFLIDEEVLREAG  252 (273)
T ss_pred             HHHHHHHhc-CccccceeEEEeccchhhccC
Confidence            999999997 677899999987766554433

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=7e-35  Score=245.47  Aligned_cols=234  Identities=23%  Similarity=0.219  Sum_probs=192.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +||||++|||+++++.|+++|++|++++|+ .+.+++..+.+........+.++.+|++|.++++++++++.+.++++|+
T Consensus         3 lVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (251)
T PRK07069          3 FITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSV   82 (251)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccE
Confidence            699999999999999999999999999998 6667676666654432334567889999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||....  ..+.+.+++++++++|+.+++.+++.++|.|.+.+     .++||++||..+..+             
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~ii~~ss~~~~~~-------------  144 (251)
T PRK07069         83 LVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-----PASIVNISSVAAFKA-------------  144 (251)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-----CcEEEEecChhhccC-------------
Confidence            9999998654  23556678999999999999999999999998754     579999999987653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------HHHHHHHHHHhhhcCChHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------VVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  230 (288)
                        .++...|+++|++++.++++++.++..++.+|+|++|+||+++|++.....       ......+..+...+.+|+++
T Consensus       145 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  222 (251)
T PRK07069        145 --EPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDV  222 (251)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHH
Confidence              456678999999999999999999988877799999999999999875321       01111222334456789999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCc
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |+.+++|++ +...+++|+.+. +++
T Consensus       223 a~~~~~l~~-~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        223 AHAVLYLAS-DESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHHcC-ccccCccCCEEEECCC
Confidence            999999986 677899999776 444

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-35  Score=247.51  Aligned_cols=222  Identities=19%  Similarity=0.207  Sum_probs=184.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.      .  .  .+.++.++++|+++.++++++++.+.+.++++|+|
T Consensus        10 lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856         10 LVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--V--DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--h--cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999998754      0  1  14568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++.+++|+.+++.+++.+.|.|.++..    .++||++||..+..+              
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~g~ii~isS~~~~~~--------------  141 (252)
T PRK07856         80 VNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG----GGSIVNIGSVSGRRP--------------  141 (252)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEEcccccCCC--------------
Confidence            999997643  235667789999999999999999999999976421    479999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|+++|++++.|++.++.+++++   |+||+|+||+++|++....    .....+....+..+..+|+++|+.+
T Consensus       142 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~---i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~  217 (252)
T PRK07856        142 -SPGTAAYGAAKAGLLNLTRSLAVEWAPK---VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWAC  217 (252)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhcCC---eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence             5667899999999999999999999865   9999999999999985432    1111122234555667999999999


Q ss_pred             HHHhcCCCccCCCceeeccCc
Q 023054          235 CYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      +||++ +...+++|+.|..++
T Consensus       218 ~~L~~-~~~~~i~G~~i~vdg  237 (252)
T PRK07856        218 LFLAS-DLASYVSGANLEVHG  237 (252)
T ss_pred             HHHcC-cccCCccCCEEEECC
Confidence            99997 778899999887433

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=252.44  Aligned_cols=222  Identities=23%  Similarity=0.297  Sum_probs=184.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++++....+           ..++.++.+|++|.++++++++.+.+.++++|+|
T Consensus        13 lItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (266)
T PRK06171         13 IVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGL   81 (266)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999875432           2367889999999999999999999999999999


Q ss_pred             EEccccCCCC-----------CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc
Q 023054           81 INNAGIMFCP-----------YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI  149 (288)
Q Consensus        81 v~~ag~~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  149 (288)
                      |||||...+.           .+.+.++|++++++|+.+++.++++++|+|.+++     .++||++||..+..+     
T Consensus        82 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  151 (266)
T PRK06171         82 VNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-----DGVIVNMSSEAGLEG-----  151 (266)
T ss_pred             EECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-----CcEEEEEccccccCC-----
Confidence            9999975321           2356788999999999999999999999998754     589999999987653     


Q ss_pred             cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCccc-CCCCCCCh--------------HHHH
Q 023054          150 RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM-TNLFKHSA--------------VVMR  214 (288)
Q Consensus       150 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~-t~~~~~~~--------------~~~~  214 (288)
                                .++...|+++|+++++|+++++.++++.|  |+||+|+||+++ |++.....              ....
T Consensus       152 ----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~g--i~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (266)
T PRK06171        152 ----------SEGQSCYAATKAALNSFTRSWAKELGKHN--IRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAG  219 (266)
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhh
Confidence                      45668899999999999999999999999  999999999996 66533110              0011


Q ss_pred             HHH--HHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          215 FLK--FFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       215 ~~~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.+  ..|..++..|+|+|+.+.||++ +.+.++||+.+. |+|.
T Consensus       220 ~~~~~~~p~~r~~~~~eva~~~~fl~s-~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        220 YTKTSTIPLGRSGKLSEVADLVCYLLS-DRASYITGVTTNIAGGK  263 (266)
T ss_pred             hcccccccCCCCCCHHHhhhheeeeec-cccccceeeEEEecCcc
Confidence            111  3456677899999999999997 788999999887 5544

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.6e-34  Score=245.64  Aligned_cols=237  Identities=19%  Similarity=0.158  Sum_probs=180.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHH----HHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASI----KDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~----~~~~~~~~~~~~   75 (288)
                      +||||++|||++++++|+++|++|++++| +.+.++.+.+++.... +.++.++.+|++|.+++    +.+++.+.+.++
T Consensus         5 lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g   83 (267)
T TIGR02685         5 VVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFRAFG   83 (267)
T ss_pred             EEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHHccC
Confidence            69999999999999999999999999875 4566766666665432 34677889999999865    555666667788


Q ss_pred             CcceEEEccccCCCCC--CCCCC-----------cchhhhhhhhhHHHHHHHhhHHHHHHhhcc-CCCCCeEEEEcCccc
Q 023054           76 PLNILINNAGIMFCPY--QISED-----------GIEMQFATNHIGHFLLTNLLLDTMNRTAKE-TGIEGRIVNLSSIAH  141 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~--~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~  141 (288)
                      ++|+||||||...+..  +.+.+           ++.+++++|+.+++.++++++|+|...... ....++|++++|..+
T Consensus        84 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~  163 (267)
T TIGR02685        84 RCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMT  163 (267)
T ss_pred             CceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhc
Confidence            9999999999754321  22222           478899999999999999999998653211 112468999999876


Q ss_pred             cccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh
Q 023054          142 QYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF  221 (288)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~  221 (288)
                      ..               +.++..+|++||+|+++|+++++.++++.|  |+||+|+||++.|+..........+....+.
T Consensus       164 ~~---------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~  226 (267)
T TIGR02685       164 DQ---------------PLLGFTMYTMAKHALEGLTRSAALELAPLQ--IRVNGVAPGLSLLPDAMPFEVQEDYRRKVPL  226 (267)
T ss_pred             cC---------------CCcccchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCccCccccchhHHHHHHHhCCC
Confidence            54               256778999999999999999999999998  9999999999976632221111222222232


Q ss_pred             h-hcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          222 F-LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       222 ~-~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      . +..+|+++++.++|+++ +...+++|+.+. +++.
T Consensus       227 ~~~~~~~~~va~~~~~l~~-~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       227 GQREASAEQIADVVIFLVS-PKAKYITGTCIKVDGGL  262 (267)
T ss_pred             CcCCCCHHHHHHHHHHHhC-cccCCcccceEEECCce
Confidence            2 45799999999999997 778999999876 4443

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=244.92  Aligned_cols=234  Identities=24%  Similarity=0.299  Sum_probs=194.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||+++++.|+++|++|++++|+.+.++++..++...  ..++.++.+|+++.++++++++++.+.++++|++
T Consensus        13 lItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   90 (258)
T PRK06949         13 LVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDIL   90 (258)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            68999999999999999999999999999999888877776554  3568899999999999999999999989999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhcc---CCCCCeEEEEcCccccccccCCccccCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKE---TGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |||+|....  ..+.+.++++.++++|+.+++.++++++|.|.++...   ....++||++||..+..+           
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------  159 (258)
T PRK06949         91 VNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV-----------  159 (258)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC-----------
Confidence            999997543  2245567899999999999999999999999765321   111479999999886542           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                          .+...+|+++|+++..+++.++.++.+.+  |+||+|+||++.|++.....   ......+..+...+..|+++++
T Consensus       160 ----~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  233 (258)
T PRK06949        160 ----LPQIGLYCMSKAAVVHMTRAMALEWGRHG--INVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDG  233 (258)
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHH
Confidence                45667899999999999999999999988  99999999999999865321   1122233345567789999999


Q ss_pred             HHHHHhcCCCccCCCceeeccC
Q 023054          233 TTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      .++||++ +.+.+++|+++..+
T Consensus       234 ~~~~l~~-~~~~~~~G~~i~~d  254 (258)
T PRK06949        234 LLLLLAA-DESQFINGAIISAD  254 (258)
T ss_pred             HHHHHhC-hhhcCCCCcEEEeC
Confidence            9999997 78899999988733

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=244.96  Aligned_cols=234  Identities=19%  Similarity=0.203  Sum_probs=191.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||.+++++|+++|++|++++|+....++..+.+.......++.++.+|+++.+++.++++++.+.++++|++
T Consensus         6 lItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~v   85 (259)
T PRK12384          6 VVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLL   85 (259)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988888777777655433568999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||.....  .+.+.++|++.+++|+.+++++++++++.|.++..    .++||++||..+..+              
T Consensus        86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~~iv~~ss~~~~~~--------------  147 (259)
T PRK12384         86 VYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI----QGRIIQINSKSGKVG--------------  147 (259)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC----CcEEEEecCcccccC--------------
Confidence            9999976542  35667789999999999999999999999976421    369999999876542              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcc-cCCCCCCChH-------------HHHHHHHHHhhhc
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLI-MTNLFKHSAV-------------VMRFLKFFSFFLW  224 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v-~t~~~~~~~~-------------~~~~~~~~~~~~~  224 (288)
                       .+....|++||+|++.++++++.+++++|  |+||+|.||.+ .|++......             ........+..++
T Consensus       148 -~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (259)
T PRK12384        148 -SKHNSGYSAAKFGGVGLTQSLALDLAEYG--ITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRG  224 (259)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCC
Confidence             44567899999999999999999999998  99999999975 6766542200             0111223455667


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .+|+|+++.++||++ +...+++|+.|. +++.
T Consensus       225 ~~~~dv~~~~~~l~~-~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        225 CDYQDVLNMLLFYAS-PKASYCTGQSINVTGGQ  256 (259)
T ss_pred             CCHHHHHHHHHHHcC-cccccccCceEEEcCCE
Confidence            799999999999997 667889999776 5543

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-35  Score=251.84  Aligned_cols=223  Identities=22%  Similarity=0.206  Sum_probs=186.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.++++.+++..   +.++..+.+|++|.++++++++++.+.++++|+|
T Consensus        13 lItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~v   89 (296)
T PRK05872         13 VVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVV   89 (296)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999999988887776632   3457778899999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++++++|+.+++++++.++|+|.+.      .|+||++||..+..+              
T Consensus        90 I~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~--------------  149 (296)
T PRK05872         90 VANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER------RGYVLQVSSLAAFAA--------------  149 (296)
T ss_pred             EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHhhcCC--------------
Confidence            999998643  3366778899999999999999999999999764      479999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH----HHHHHHH--HhhhcCChHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV----MRFLKFF--SFFLWKNVPQGAA  232 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~--~~~~~~~~~~~a~  232 (288)
                       .++...|++||+++++|+++++.+++.+|  |+||+|+||+++|++.......    ......+  +.....+|+++|+
T Consensus       150 -~~~~~~Y~asKaal~~~~~~l~~e~~~~g--i~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~  226 (296)
T PRK05872        150 -APGMAAYCASKAGVEAFANALRLEVAHHG--VTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAA  226 (296)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHHHHHC--cEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHH
Confidence             56678999999999999999999999999  9999999999999987653111    1111111  3345679999999


Q ss_pred             HHHHHhcCCCccCCCcee
Q 023054          233 TTCYVALHPNLKGVTGKY  250 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~  250 (288)
                      .++++++ ....+++|..
T Consensus       227 ~i~~~~~-~~~~~i~~~~  243 (296)
T PRK05872        227 AFVDGIE-RRARRVYAPR  243 (296)
T ss_pred             HHHHHHh-cCCCEEEchH
Confidence            9999997 5666666553

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-35  Score=246.26  Aligned_cols=229  Identities=20%  Similarity=0.196  Sum_probs=191.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+++..++..+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         9 lItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~v   86 (258)
T PRK07890          9 VVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALERFGRVDAL   86 (258)
T ss_pred             EEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHHcCCccEE
Confidence            69999999999999999999999999999998888777777554  4578999999999999999999999989999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||....   ..+.+.+++++++++|+.+++.+++++.+.|.+.      .++||++||..+..              
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~--------------  146 (258)
T PRK07890         87 VNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES------GGSIVMINSMVLRH--------------  146 (258)
T ss_pred             EECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCEEEEEechhhcc--------------
Confidence            999997543   2356678899999999999999999999999764      46999999988754              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------------hHHHHHHHHHHhhhc
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------------AVVMRFLKFFSFFLW  224 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~~~  224 (288)
                       +.++...|+++|++++.++++++.+++.++  |+||+|+||++.|++....             .......+..+...+
T Consensus       147 -~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (258)
T PRK07890        147 -SQPKYGAYKMAKGALLAASQSLATELGPQG--IRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRL  223 (258)
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCcccc
Confidence             256678899999999999999999999988  9999999999999875421             001111222344556


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      .+|+|+|+.++|+++ +...+++|+.+. +++
T Consensus       224 ~~~~dva~a~~~l~~-~~~~~~~G~~i~~~gg  254 (258)
T PRK07890        224 PTDDEVASAVLFLAS-DLARAITGQTLDVNCG  254 (258)
T ss_pred             CCHHHHHHHHHHHcC-HhhhCccCcEEEeCCc
Confidence            789999999999997 667799999775 444

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=2.3e-34  Score=242.80  Aligned_cols=231  Identities=22%  Similarity=0.254  Sum_probs=194.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||.+++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|++++.++++++.+.++++|+|
T Consensus         4 lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   81 (254)
T TIGR02415         4 LVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM   81 (254)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988888777777654  4578999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++++++|+.+++.+++.+++.|.+...    .++||++||..+..+              
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~iv~~sS~~~~~~--------------  143 (254)
T TIGR02415        82 VNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH----GGKIINAASIAGHEG--------------  143 (254)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC----CeEEEEecchhhcCC--------------
Confidence            999998644  235677889999999999999999999999987531    379999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-------------HHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-------------VMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~~~~~~  225 (288)
                       .+....|+.+|++++.+++.++.++...+  |+|++|+||+++|++......             ...+....+...+.
T Consensus       144 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (254)
T TIGR02415       144 -NPILSAYSSTKFAVRGLTQTAAQELAPKG--ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPS  220 (254)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCC
Confidence             55678999999999999999999999888  999999999999998643211             11122233455678


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeeccCc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      +|+++++.+.||++ +...+++|+++..++
T Consensus       221 ~~~~~a~~~~~l~~-~~~~~~~g~~~~~d~  249 (254)
T TIGR02415       221 EPEDVAGLVSFLAS-EDSDYITGQSILVDG  249 (254)
T ss_pred             CHHHHHHHHHhhcc-cccCCccCcEEEecC
Confidence            99999999999997 678899999887443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.3e-34  Score=244.61  Aligned_cols=225  Identities=22%  Similarity=0.188  Sum_probs=184.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+..+.++..+++     +.++.++++|+++.++++++++++.+.++++|+|
T Consensus        14 lItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717         14 LVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             EEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999887766654443     3468899999999999999999999989999999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||...+    ..+.+.++|++.+++|+.+++.++++++|+|.+.      .++||++||..+..+            
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~g~ii~~sS~~~~~~------------  150 (255)
T PRK05717         89 VCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH------NGAIVNLASTRARQS------------  150 (255)
T ss_pred             EECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CcEEEEEcchhhcCC------------
Confidence            999998643    2245677899999999999999999999999764      479999999987653            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                         .+....|+++|++++.+++.++.++.. +  |+||+|+||+++|++.....   .........+..+..+|+++|..
T Consensus       151 ---~~~~~~Y~~sKaa~~~~~~~la~~~~~-~--i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  224 (255)
T PRK05717        151 ---EPDTEAYAASKGGLLALTHALAISLGP-E--IRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAM  224 (255)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHhcC-C--CEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHH
Confidence               455678999999999999999999875 4  99999999999998754321   11111112344556689999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      ++|+++ +...+++|+.+. +++
T Consensus       225 ~~~l~~-~~~~~~~g~~~~~~gg  246 (255)
T PRK05717        225 VAWLLS-RQAGFVTGQEFVVDGG  246 (255)
T ss_pred             HHHHcC-chhcCccCcEEEECCC
Confidence            999996 667899999776 444

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.8e-34  Score=243.73  Aligned_cols=240  Identities=20%  Similarity=0.203  Sum_probs=190.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.+++..+.+....+...+.++.+|++|.+++.++++.+.+.++++|+|
T Consensus         8 lItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~v   87 (256)
T PRK09186          8 LITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGA   87 (256)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEE
Confidence            69999999999999999999999999999999888888877654434557788999999999999999999989999999


Q ss_pred             EEccccCC-----CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           81 INNAGIMF-----CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        81 v~~ag~~~-----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |||||...     ...+.+.+.++..+++|+.+++.++++++|.|.+++     .++||++||..+...+...     ..
T Consensus        88 i~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~-----~~  157 (256)
T PRK09186         88 VNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-----GGNLVNISSIYGVVAPKFE-----IY  157 (256)
T ss_pred             EECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-----CceEEEEechhhhccccch-----hc
Confidence            99997642     223566788999999999999999999999998754     5799999998776431110     00


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                      ..........|++||+++++++++++.++...+  |+||+|+||++.++....  ....+....+...+.+|+|+|+.++
T Consensus       158 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~--i~v~~i~Pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~dva~~~~  233 (256)
T PRK09186        158 EGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSN--IRVNCVSPGGILDNQPEA--FLNAYKKCCNGKGMLDPDDICGTLV  233 (256)
T ss_pred             cccccCCcchhHHHHHHHHHHHHHHHHHhCcCC--eEEEEEecccccCCCCHH--HHHHHHhcCCccCCCCHHHhhhhHh
Confidence            111112234799999999999999999999988  999999999998765221  1222222233455679999999999


Q ss_pred             HHhcCCCccCCCceeec-cCc
Q 023054          236 YVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |+++ +...+++|+++. ++|
T Consensus       234 ~l~~-~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        234 FLLS-DQSKYITGQNIIVDDG  253 (256)
T ss_pred             heec-cccccccCceEEecCC
Confidence            9997 667899999876 544

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-35  Score=246.25  Aligned_cols=222  Identities=21%  Similarity=0.230  Sum_probs=182.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|++...      .     ..++.++.+|++|.++++++++++.+.++++|+|
T Consensus        13 lItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523         13 LVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------L-----PEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             EEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------c-----CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999986531      1     3468889999999999999999999999999999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||....    ..+.+.++|++.+++|+.+++.+++.++|+|.+++     .++||++||..+..+            
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~ii~isS~~~~~~------------  144 (260)
T PRK06523         82 VHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-----SGVIIHVTSIQRRLP------------  144 (260)
T ss_pred             EECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEecccccCC------------
Confidence            999997532    23467788999999999999999999999998754     579999999887642            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---------HHHHH-------HHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---------VMRFL-------KFFS  220 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~-------~~~~  220 (288)
                        ...+...|+++|++++.|++.++.+++++|  |+||+|+||+++|++......         .....       ...+
T Consensus       145 --~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  220 (260)
T PRK06523        145 --LPESTTAYAAAKAALSTYSKSLSKEVAPKG--VRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP  220 (260)
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc
Confidence              012567899999999999999999999999  999999999999998643210         00111       1124


Q ss_pred             hhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          221 FFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       221 ~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      ..+..+|+|+|+.++||++ +...+++|+.+. ++|
T Consensus       221 ~~~~~~~~~va~~~~~l~s-~~~~~~~G~~~~vdgg  255 (260)
T PRK06523        221 LGRPAEPEEVAELIAFLAS-DRAASITGTEYVIDGG  255 (260)
T ss_pred             cCCCCCHHHHHHHHHHHhC-cccccccCceEEecCC
Confidence            4556789999999999997 778899999776 444

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-34  Score=243.81  Aligned_cols=230  Identities=23%  Similarity=0.224  Sum_probs=190.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++..+.+...  +.++.++.+|+++++++.++++++.+.++++|+|
T Consensus        14 lItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   91 (263)
T PRK07814         14 VVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIV   91 (263)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888777777554  4568899999999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++++++|+.+++.+++++.|+|.+...    .++||++||..+..+              
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~g~iv~~sS~~~~~~--------------  153 (263)
T PRK07814         92 VNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG----GGSVINISSTMGRLA--------------  153 (263)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC----CeEEEEEccccccCC--------------
Confidence            999997543  235667889999999999999999999999976321    579999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|+++|++++.++++++.++.+ +  |+||+|+||++.|++.....    .........+.....+|+++|+.+
T Consensus       154 -~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  229 (263)
T PRK07814        154 -GRGFAAYGTAKAALAHYTRLAALDLCP-R--IRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAA  229 (263)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHCC-C--ceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             566788999999999999999999976 5  99999999999999765321    111122223444557899999999


Q ss_pred             HHHhcCCCccCCCceeeccCc
Q 023054          235 CYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      +|+++ +...+++|+.+..++
T Consensus       230 ~~l~~-~~~~~~~g~~~~~~~  249 (263)
T PRK07814        230 VYLAS-PAGSYLTGKTLEVDG  249 (263)
T ss_pred             HHHcC-ccccCcCCCEEEECC
Confidence            99996 777899999876433

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.6e-34  Score=240.53  Aligned_cols=229  Identities=20%  Similarity=0.178  Sum_probs=188.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++. +++....++..+++...  +.++.++.+|++|.+++.++++++.+.++++|+
T Consensus         7 lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   84 (246)
T PRK12938          7 YVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDV   84 (246)
T ss_pred             EEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999998885 45555555555555443  456888899999999999999999998899999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||....  ..+.+.+++++++++|+.+++.+++.++|.|.+++     .++||++||..+..+             
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~-------------  146 (246)
T PRK12938         85 LVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-----WGRIINISSVNGQKG-------------  146 (246)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CeEEEEEechhccCC-------------
Confidence            9999998643  23567788999999999999999999999997754     579999999876652             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|+++|++++.+++++++++...+  |++|+|+||++.|++......  ........+..+..+|+++++.+.
T Consensus       147 --~~~~~~y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  222 (246)
T PRK12938        147 --QFGQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVA  222 (246)
T ss_pred             --CCCChhHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHH
Confidence              45678899999999999999999999988  999999999999998764311  111222234456679999999999


Q ss_pred             HHhcCCCccCCCceeeccC
Q 023054          236 YVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~  254 (288)
                      ||++ +...+++|+.+..+
T Consensus       223 ~l~~-~~~~~~~g~~~~~~  240 (246)
T PRK12938        223 WLAS-EESGFSTGADFSLN  240 (246)
T ss_pred             HHcC-cccCCccCcEEEEC
Confidence            9997 67789999987743

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-34  Score=239.91  Aligned_cols=233  Identities=25%  Similarity=0.246  Sum_probs=186.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAA-RNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||.++++.|+++|++|+++. |+.+.++....++...  +.++.++.||+++.++++++++++.+.++++|+
T Consensus         6 lItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06947          6 LITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFGRLDA   83 (248)
T ss_pred             EEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999998764 6666666666666543  457899999999999999999999988899999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ||||||...+   ..+.+.++++..+++|+.+++.+++.+++.+..++.  +..++||++||..+..+.           
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~~~ii~~sS~~~~~~~-----------  150 (248)
T PRK06947         84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRG--GRGGAIVNVSSIASRLGS-----------  150 (248)
T ss_pred             EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--CCCcEEEEECchhhcCCC-----------
Confidence            9999998643   235567889999999999999999999998875421  114789999998876531           


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--h-HHHHHHHHHHhhhcCChHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--A-VVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~-~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                         ......|++||+++++++++++.++.+.|  |+|+.|+||+++|++....  + .........+..+..+|+++|+.
T Consensus       151 ---~~~~~~Y~~sK~~~~~~~~~la~~~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~  225 (248)
T PRK06947        151 ---PNEYVDYAGSKGAVDTLTLGLAKELGPHG--VRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAET  225 (248)
T ss_pred             ---CCCCcccHhhHHHHHHHHHHHHHHhhhhC--cEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence               11235799999999999999999999888  9999999999999986431  1 11111122233445689999999


Q ss_pred             HHHHhcCCCccCCCceeeccC
Q 023054          234 TCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++|+++ +...+++|++|..+
T Consensus       226 ~~~l~~-~~~~~~~G~~~~~~  245 (248)
T PRK06947        226 IVWLLS-DAASYVTGALLDVG  245 (248)
T ss_pred             HHHHcC-ccccCcCCceEeeC
Confidence            999997 66789999998743

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-34  Score=242.81  Aligned_cols=231  Identities=21%  Similarity=0.278  Sum_probs=187.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+++.. +..+++...  +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus        11 lItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   87 (258)
T PRK08628         11 IVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGL   87 (258)
T ss_pred             EEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6999999999999999999999999999998766 556666544  4568999999999999999999999999999999


Q ss_pred             EEccccCCCC-CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||||..... .+.+.++++..+++|+.+++.+++.++|.|.+.      .++||++||..+..+               
T Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~iv~~ss~~~~~~---------------  146 (258)
T PRK08628         88 VNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS------RGAIVNISSKTALTG---------------  146 (258)
T ss_pred             EECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc------CcEEEEECCHHhccC---------------
Confidence            9999975432 233337899999999999999999999988654      479999999887653               


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----HHH---HHHHHHHh-hhcCChHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----VVM---RFLKFFSF-FLWKNVPQG  230 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~---~~~~~~~~-~~~~~~~~~  230 (288)
                      .++...|++||++++.+++.++.++...+  |+||+|+||.++|++.....     ...   ......+. ..+.+|+|+
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  224 (258)
T PRK08628        147 QGGTSGYAAAKGAQLALTREWAVALAKDG--VRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEI  224 (258)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHH
Confidence            45678999999999999999999999888  99999999999999754310     000   11111122 246789999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCccCC
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      |+.++|+++ +...+++|+.+. +++...
T Consensus       225 a~~~~~l~~-~~~~~~~g~~~~~~gg~~~  252 (258)
T PRK08628        225 ADTAVFLLS-ERSSHTTGQWLFVDGGYVH  252 (258)
T ss_pred             HHHHHHHhC-hhhccccCceEEecCCccc
Confidence            999999997 677889998766 555433

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.4e-34  Score=241.23  Aligned_cols=230  Identities=20%  Similarity=0.210  Sum_probs=189.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++ ..|+.+..+++.+++...  +.++.++.+|++|.+++.++++++.+.++++|+
T Consensus         8 lItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (250)
T PRK08063          8 LVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEEFGRLDV   85 (250)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999876 578888777777777654  467899999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||....  ..+.+.++++..+++|+.+++.++++++|.|.+++     .++||++||..+..+             
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~-------------  147 (250)
T PRK08063         86 FVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-----GGKIISLSSLGSIRY-------------  147 (250)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CeEEEEEcchhhccC-------------
Confidence            9999997543  33566778889999999999999999999998754     579999999876542             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHH----HHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF----LKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~  233 (288)
                        .++...|+++|++++.|+++++.++.+.+  |++|+|+||++.|++..........    ....+...+.+++|+|+.
T Consensus       148 --~~~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  223 (250)
T PRK08063        148 --LENYTTVGVSKAALEALTRYLAVELAPKG--IAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANA  223 (250)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHhHhC--eEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHH
Confidence              45667899999999999999999999888  9999999999999986543211111    112233446789999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      ++++++ +...+++|+.+. +++
T Consensus       224 ~~~~~~-~~~~~~~g~~~~~~gg  245 (250)
T PRK08063        224 VLFLCS-PEADMIRGQTIIVDGG  245 (250)
T ss_pred             HHHHcC-chhcCccCCEEEECCC
Confidence            999996 566788999876 444

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-34  Score=248.13  Aligned_cols=230  Identities=23%  Similarity=0.225  Sum_probs=184.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++++ ....++..+++...  +.++.++.+|++|.++++++++.+.+ ++++|+
T Consensus        16 lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~   92 (306)
T PRK07792         16 VVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATAVG-LGGLDI   92 (306)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHH-hCCCCE
Confidence            699999999999999999999999999875 44566677777654  46788999999999999999999988 899999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC--CCCCeEEEEcCccccccccCCccccCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET--GIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ||||||+....  .+.+.++|++.+++|+.+++.++++++|+|.+.....  ...|+||++||..+..+           
T Consensus        93 li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  161 (306)
T PRK07792         93 VVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG-----------  161 (306)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC-----------
Confidence            99999987542  3567788999999999999999999999997542111  11479999999887653           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                          .++...|+++|+++++|++.++.++.+.|  |+||+|+||. .|+|........... ........+|+++|..++
T Consensus       162 ----~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~i~Pg~-~t~~~~~~~~~~~~~-~~~~~~~~~pe~va~~v~  233 (306)
T PRK07792        162 ----PVGQANYGAAKAGITALTLSAARALGRYG--VRANAICPRA-RTAMTADVFGDAPDV-EAGGIDPLSPEHVVPLVQ  233 (306)
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEECCCC-CCchhhhhccccchh-hhhccCCCCHHHHHHHHH
Confidence                45667899999999999999999999999  9999999995 888754321000000 011122347999999999


Q ss_pred             HHhcCCCccCCCceeecc
Q 023054          236 YVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~  253 (288)
                      ||++ +...+++|++|..
T Consensus       234 ~L~s-~~~~~~tG~~~~v  250 (306)
T PRK07792        234 FLAS-PAAAEVNGQVFIV  250 (306)
T ss_pred             HHcC-ccccCCCCCEEEE
Confidence            9997 6778999997763

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-34  Score=252.25  Aligned_cols=218  Identities=19%  Similarity=0.187  Sum_probs=183.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+++.+++..+++...  +.++.++.+|++|.++++++++.+.+.++++|++
T Consensus        12 lITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~l   89 (334)
T PRK07109         12 VITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEEELGPIDTW   89 (334)
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            69999999999999999999999999999999988888887654  4678999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++.+++|+.+++.+++.++|+|.++.     .++||++||..+..+              
T Consensus        90 InnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-----~g~iV~isS~~~~~~--------------  150 (334)
T PRK07109         90 VNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-----RGAIIQVGSALAYRS--------------  150 (334)
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEeCChhhccC--------------
Confidence            999997543  34677889999999999999999999999998764     589999999988753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .+....|+++|+++.+|+++++.|+..++.+|+|++|+||+++|++........ .....+.....+|+++|+.+++++
T Consensus       151 -~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~-~~~~~~~~~~~~pe~vA~~i~~~~  228 (334)
T PRK07109        151 -IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRL-PVEPQPVPPIYQPEVVADAILYAA  228 (334)
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhc-cccccCCCCCCCHHHHHHHHHHHH
Confidence             556688999999999999999999987655599999999999999764321000 001112334568999999999999


Q ss_pred             cCC
Q 023054          239 LHP  241 (288)
Q Consensus       239 ~~~  241 (288)
                      +++
T Consensus       229 ~~~  231 (334)
T PRK07109        229 EHP  231 (334)
T ss_pred             hCC
Confidence            754

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-34  Score=241.52  Aligned_cols=225  Identities=26%  Similarity=0.329  Sum_probs=186.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++..+++     +.++.++++|++|.+++..+++.+.+.++++|+|
T Consensus        10 lItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500         10 LITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999987766655544     4568899999999999999999999988999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||.....  .+.+.+++++++++|+.+++.++++++|+|.+       .+++|+++|..+..+              
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~i~~~S~~~~~~--------------  143 (249)
T PRK06500         85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-------PASIVLNGSINAHIG--------------  143 (249)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEechHhccC--------------
Confidence            9999976432  35677889999999999999999999999854       468999999877653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HH----HHHHHHHHhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VV----MRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~----~~~~~~~~~~~~~~~~~~  230 (288)
                       .+....|+.+|+++++++++++.++...+  |+|++|+||++.|++.....    ..    .......+..++.+|+++
T Consensus       144 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  220 (249)
T PRK06500        144 -MPNSSVYAASKAALLSLAKTLSGELLPRG--IRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEI  220 (249)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHH
Confidence             45678999999999999999999999888  99999999999999754310    01    111222244456799999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCc
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |+.++|+++ +...+++|..+. ++|
T Consensus       221 a~~~~~l~~-~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        221 AKAVLYLAS-DESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHHHHHcC-ccccCccCCeEEECCC
Confidence            999999997 677899999876 444

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-34  Score=267.12  Aligned_cols=229  Identities=23%  Similarity=0.264  Sum_probs=191.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+.++++|+|
T Consensus         9 lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          9 LVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999998887766655     3567889999999999999999999999999999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+..+    ..+.+.++|++++++|+.+++.++++++|+|.+++.    +++||++||..+..+            
T Consensus        84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----g~~iv~isS~~~~~~------------  147 (520)
T PRK06484         84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH----GAAIVNVASGAGLVA------------  147 (520)
T ss_pred             EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CCeEEEECCcccCCC------------
Confidence            999998422    235677889999999999999999999999976531    249999999988763            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-----HHHHHHHHHhhhcCChHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-----VMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~a  231 (288)
                         .+....|+++|+++.+|+++++.|+...+  |+||+|+||+++|++......     .......++.....+|+++|
T Consensus       148 ---~~~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  222 (520)
T PRK06484        148 ---LPKRTAYSASKAAVISLTRSLACEWAAKG--IRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIA  222 (520)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHH
Confidence               55678899999999999999999999999  999999999999998653210     11122233444567999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCcc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.++|+++ +...+++|+.+. +++.
T Consensus       223 ~~v~~l~~-~~~~~~~G~~~~~~gg~  247 (520)
T PRK06484        223 EAVFFLAS-DQASYITGSTLVVDGGW  247 (520)
T ss_pred             HHHHHHhC-ccccCccCceEEecCCe
Confidence            99999997 678899999776 4443

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.1e-34  Score=241.08  Aligned_cols=229  Identities=21%  Similarity=0.243  Sum_probs=186.0

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCC-----------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHH
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARN-----------MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFA   67 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   67 (288)
                      |||||++  |||.+++++|+++|++|++++|+           ..........+...  +.+++++.+|+++.+++.+++
T Consensus         9 lItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~   86 (256)
T PRK12748          9 LVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQPYAPNRVF   86 (256)
T ss_pred             EEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHH
Confidence            6999994  99999999999999999999987           22222233444332  457999999999999999999


Q ss_pred             HHHHhcCCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc
Q 023054           68 QNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY  145 (288)
Q Consensus        68 ~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  145 (288)
                      +++.+.++++|+||||||+...  ..+.+.+++++.+++|+.+++.+++++++.|.+..     .++||++||..+..+ 
T Consensus        87 ~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~ss~~~~~~-  160 (256)
T PRK12748         87 YAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-----GGRIINLTSGQSLGP-  160 (256)
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-----CeEEEEECCccccCC-
Confidence            9999999999999999998643  23556678999999999999999999999986643     579999999876542 


Q ss_pred             cCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcC
Q 023054          146 KGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWK  225 (288)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  225 (288)
                                    .++...|+++|+++++++++++.++...+  |+|++|+||+++|++.... .........+..++.
T Consensus       161 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~  223 (256)
T PRK12748        161 --------------MPDELAYAATKGAIEAFTKSLAPELAEKG--ITVNAVNPGPTDTGWITEE-LKHHLVPKFPQGRVG  223 (256)
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCcccCCCCChh-HHHhhhccCCCCCCc
Confidence                          45667899999999999999999999888  9999999999999976532 112222233445567


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|+++|+.++|+++ +...+++|+++. |++
T Consensus       224 ~~~~~a~~~~~l~~-~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        224 EPVDAARLIAFLVS-EEAKWITGQVIHSEGG  253 (256)
T ss_pred             CHHHHHHHHHHHhC-cccccccCCEEEecCC
Confidence            89999999999997 778899999886 444

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-34  Score=244.09  Aligned_cols=227  Identities=26%  Similarity=0.275  Sum_probs=187.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++++|+.. ..+...+.+...  +.++.++.+|+++.+++.++++++.+.++++|+
T Consensus        50 LItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~  127 (290)
T PRK06701         50 LITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVRELGRLDI  127 (290)
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999854 344444444332  457889999999999999999999998899999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ||||||....   ..+.+.++|.+++++|+.+++.+++++++.|.+       .++||++||..+..+            
T Consensus       128 lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-------~g~iV~isS~~~~~~------------  188 (290)
T PRK06701        128 LVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-------GSAIINTGSITGYEG------------  188 (290)
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-------CCeEEEEecccccCC------------
Confidence            9999997533   235667889999999999999999999999854       479999999887653            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                         .+....|+++|+|++.++++++.++...|  |+|++|+||+++|++.....   ....+....+...+.+|+|+|+.
T Consensus       189 ---~~~~~~Y~~sK~a~~~l~~~la~~~~~~g--Irv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  263 (290)
T PRK06701        189 ---NETLIDYSATKGAIHAFTRSLAQSLVQKG--IRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPA  263 (290)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence               45567899999999999999999999988  99999999999999865321   11122223344566789999999


Q ss_pred             HHHHhcCCCccCCCceeeccC
Q 023054          234 TCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++||++ +...+++|..|..+
T Consensus       264 ~~~ll~-~~~~~~~G~~i~id  283 (290)
T PRK06701        264 YVFLAS-PDSSYITGQMLHVN  283 (290)
T ss_pred             HHHHcC-cccCCccCcEEEeC
Confidence            999997 67889999987743

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=238.24  Aligned_cols=230  Identities=27%  Similarity=0.265  Sum_probs=194.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+++.+++..+.+...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   88 (250)
T PRK12939         11 LVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAALGGLDGL   88 (250)
T ss_pred             EEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999998888877777554  4578999999999999999999999988999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|.....  .+.+.++++..+.+|+.+++.+++.+.|+|.+++     .+++|++||..+..+              
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  149 (250)
T PRK12939         89 VNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-----RGRIVNLASDTALWG--------------  149 (250)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CeEEEEECchhhccC--------------
Confidence            9999986542  3556678999999999999999999999997754     579999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                       .+....|+++|++++.+++.++.++...+  |+|++|+||++.|++.....   ....+....+...+.+|+|+|+.++
T Consensus       150 -~~~~~~y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  226 (250)
T PRK12939        150 -APKLGAYVASKGAVIGMTRSLARELGGRG--ITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVL  226 (250)
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHHhhhC--EEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence             45567899999999999999999999888  99999999999999875432   2222333334556689999999999


Q ss_pred             HHhcCCCccCCCceeeccCc
Q 023054          236 YVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~~  255 (288)
                      ++++ +...+++|++|..++
T Consensus       227 ~l~~-~~~~~~~G~~i~~~g  245 (250)
T PRK12939        227 FLLS-DAARFVTGQLLPVNG  245 (250)
T ss_pred             HHhC-ccccCccCcEEEECC
Confidence            9997 667799999987444

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-34  Score=240.98  Aligned_cols=230  Identities=18%  Similarity=0.194  Sum_probs=188.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||.+++++|+++|++|++++|+.+.+++..+.+...  +.++.++.+|+++.++++++++++.+.++++|++
T Consensus        13 lItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~v   90 (264)
T PRK07576         13 VVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVL   90 (264)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988877776666554  3467889999999999999999999888999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++.+++|+.+++.++++++|.|.+.      +|+||++||..+..               
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~------~g~iv~iss~~~~~---------------  149 (264)
T PRK07576         91 VSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP------GASIIQISAPQAFV---------------  149 (264)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCEEEEECChhhcc---------------
Confidence            999986533  2355667899999999999999999999998653      47999999988764               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCccc-CCCCCCC----hHHHHHHHHHHhhhcCChHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM-TNLFKHS----AVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~-t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                      +.+....|+++|++++.|+++++.++..+|  |+|++|+||++. |+.....    ..........+...+.+|+|+|+.
T Consensus       150 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  227 (264)
T PRK07576        150 PMPMQAHVCAAKAGVDMLTRTLALEWGPEG--IRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANA  227 (264)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            256778899999999999999999999988  999999999996 5532221    011112222344556789999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++|+++ +...+++|+++. ++++
T Consensus       228 ~~~l~~-~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        228 ALFLAS-DMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHHHcC-hhhcCccCCEEEECCCc
Confidence            999997 677899999887 4443

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=8.4e-34  Score=236.93  Aligned_cols=220  Identities=25%  Similarity=0.287  Sum_probs=176.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++++.|+++|++|+++++ +.+..+++..++       .+.++.+|++|.+++.+++++    ++++|+
T Consensus        10 lItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~~~~~~~~----~~~id~   78 (237)
T PRK12742         10 LVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDAVIDVVRK----SGALDI   78 (237)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHHHHHHHHH----hCCCcE
Confidence            69999999999999999999999998876 444444433322       256788999999988877653    468999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      +|||||....  ..+.+.++|++.+++|+.+++.+++.+++.|.+       .++||++||..+...             
T Consensus        79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~-------------  138 (237)
T PRK12742         79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-------GGRIIIIGSVNGDRM-------------  138 (237)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-------CCeEEEEeccccccC-------------
Confidence            9999998643  235677889999999999999999999999864       479999999876321             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH-HHHHHHHHhhhcCChHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV-MRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       ..++...|+++|++++.+++.++.++++.+  |+||+|+||+++|++....... .......+..++.+|+|+++.++|
T Consensus       139 -~~~~~~~Y~~sKaa~~~~~~~la~~~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~  215 (237)
T PRK12742        139 -PVAGMAAYAASKSALQGMARGLARDFGPRG--ITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAW  215 (237)
T ss_pred             -CCCCCcchHHhHHHHHHHHHHHHHHHhhhC--eEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence             245678899999999999999999999999  9999999999999986543211 112222345567899999999999


Q ss_pred             HhcCCCccCCCceeec-cCc
Q 023054          237 VALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |++ +...+++|+.+. |+|
T Consensus       216 l~s-~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        216 LAG-PEASFVTGAMHTIDGA  234 (237)
T ss_pred             HcC-cccCcccCCEEEeCCC
Confidence            997 788999999887 444

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-34  Score=243.81  Aligned_cols=216  Identities=22%  Similarity=0.242  Sum_probs=180.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.+++.++++++.+.++++|+|
T Consensus        10 lVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l   87 (275)
T PRK05876         10 VITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVV   87 (275)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888887777644  4568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++..    .|+||++||..+..+              
T Consensus        88 i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~----~g~iv~isS~~~~~~--------------  149 (275)
T PRK05876         88 FSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT----GGHVVFTASFAGLVP--------------  149 (275)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC----CCEEEEeCChhhccC--------------
Confidence            999998643  336677889999999999999999999999976531    479999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHH----------HHHHH-HhhhcCCh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR----------FLKFF-SFFLWKNV  227 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~----------~~~~~-~~~~~~~~  227 (288)
                       .++...|++||+++.+|+++++.+++.+|  |+|++|+||++.|++..+......          ..... ......+|
T Consensus       150 -~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (275)
T PRK05876        150 -NAGLGAYGVAKYGVVGLAETLAREVTADG--IGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGV  226 (275)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCH
Confidence             56778899999999999999999999888  999999999999998654311100          00001 11234689


Q ss_pred             HHHHHHHHHHhc
Q 023054          228 PQGAATTCYVAL  239 (288)
Q Consensus       228 ~~~a~~~~~l~~  239 (288)
                      +++|+.++..+.
T Consensus       227 ~dva~~~~~ai~  238 (275)
T PRK05876        227 DDIAQLTADAIL  238 (275)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999885

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-33  Score=238.26  Aligned_cols=229  Identities=25%  Similarity=0.281  Sum_probs=192.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||++++++|+++|++|++++|+.+..++....+..   +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         9 lItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   85 (251)
T PRK07231          9 IVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALERFGSVDIL   85 (251)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6999999999999999999999999999999888777666644   3568899999999999999999998888999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||+|....   ..+.+.+++++.+++|+.+++.+++.++++|.++.     .++||++||..+..+             
T Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-------------  147 (251)
T PRK07231         86 VNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-----GGAIVNVASTAGLRP-------------  147 (251)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcChhhcCC-------------
Confidence            999997543   23567788999999999999999999999998754     579999999887653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH------HHHHHHHHHhhhcCChHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV------VMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~a  231 (288)
                        .++...|+.+|++++.+++.++.+++..+  |+|++++||++.|++......      ...+....+...+.+|+|+|
T Consensus       148 --~~~~~~y~~sk~~~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  223 (251)
T PRK07231        148 --RPGLGWYNASKGAVITLTKALAAELGPDK--IRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIA  223 (251)
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHH
Confidence              55678899999999999999999999888  999999999999998664311      11122233445567999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      ..++++++ +...+++|+++. +++
T Consensus       224 ~~~~~l~~-~~~~~~~g~~~~~~gg  247 (251)
T PRK07231        224 NAALFLAS-DEASWITGVTLVVDGG  247 (251)
T ss_pred             HHHHHHhC-ccccCCCCCeEEECCC
Confidence            99999996 667789999876 443

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=237.16  Aligned_cols=227  Identities=24%  Similarity=0.277  Sum_probs=187.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +||||++|||+++++.|+++|++|+++.|+. ...++..+++...  +.++.++.+|+++.++++++++++.+.++++|+
T Consensus         9 lItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (245)
T PRK12937          9 IVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAETAFGRIDV   86 (245)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999998887754 3455555555443  467899999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||....  ..+.+.+++++++++|+.+++.++++++|.|.+       .++||++||..+..              
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~--------------  145 (245)
T PRK12937         87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ-------GGRIINLSTSVIAL--------------  145 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc-------CcEEEEEeeccccC--------------
Confidence            9999998643  235566789999999999999999999999854       47999999987654              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       +.++...|+.+|++++.++++++.++...+  |++++|+||++.|++....   .....+.+..+.....+|+++|+.+
T Consensus       146 -~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  222 (245)
T PRK12937        146 -PLPGYGPYAASKAAVEGLVHVLANELRGRG--ITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAV  222 (245)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence             256678899999999999999999999988  9999999999999985322   1112222334455667999999999


Q ss_pred             HHHhcCCCccCCCceeeccC
Q 023054          235 CYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +|+++ +...+++|++|..+
T Consensus       223 ~~l~~-~~~~~~~g~~~~~~  241 (245)
T PRK12937        223 AFLAG-PDGAWVNGQVLRVN  241 (245)
T ss_pred             HHHcC-ccccCccccEEEeC
Confidence            99996 67789999988744

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=3.6e-34  Score=248.81  Aligned_cols=208  Identities=21%  Similarity=0.225  Sum_probs=170.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC--hHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS--IASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id   78 (288)
                      +||||++|||+++|++|+++|++|++++|++++++++.+++...+++.++..+.+|+++  .+.++.+.+.+.  ..++|
T Consensus        57 lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~--~~did  134 (320)
T PLN02780         57 LVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE--GLDVG  134 (320)
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc--CCCcc
Confidence            69999999999999999999999999999999999998888776655678899999995  233444443331  12577


Q ss_pred             eEEEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           79 ILINNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        79 ~lv~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      +||||||+..+    ..+.+.+++++++++|+.+++.+++.++|.|.+++     .|+||++||.++...+         
T Consensus       135 ilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-----~g~IV~iSS~a~~~~~---------  200 (320)
T PLN02780        135 VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-----KGAIINIGSGAAIVIP---------  200 (320)
T ss_pred             EEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-----CcEEEEEechhhccCC---------
Confidence            99999998642    23567788999999999999999999999998765     6899999999875310         


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                          +.+....|++||+++++|+++|+.|++++|  |+|++|+||+++|++.....         ......+|+++|+.+
T Consensus       201 ----~~p~~~~Y~aSKaal~~~~~~L~~El~~~g--I~V~~v~PG~v~T~~~~~~~---------~~~~~~~p~~~A~~~  265 (320)
T PLN02780        201 ----SDPLYAVYAATKAYIDQFSRCLYVEYKKSG--IDVQCQVPLYVATKMASIRR---------SSFLVPSSDGYARAA  265 (320)
T ss_pred             ----CCccchHHHHHHHHHHHHHHHHHHHHhccC--eEEEEEeeCceecCcccccC---------CCCCCCCHHHHHHHH
Confidence                134568899999999999999999999999  99999999999999875221         011245899999999


Q ss_pred             HHHhc
Q 023054          235 CYVAL  239 (288)
Q Consensus       235 ~~l~~  239 (288)
                      +..+.
T Consensus       266 ~~~~~  270 (320)
T PLN02780        266 LRWVG  270 (320)
T ss_pred             HHHhC
Confidence            99995

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.2e-33  Score=237.82  Aligned_cols=228  Identities=22%  Similarity=0.240  Sum_probs=191.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||++++++|+++|++|++++|+.+..++..+.+...  +.++.++.+|++|.++++++++++.+.++++|++
T Consensus         7 lItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~v   84 (250)
T TIGR03206         7 IVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQALGPVDVL   84 (250)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998887777766543  4568999999999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|....  ..+.+.+++++.+++|+.+++.+++.+++.|.+.+     .++||++||..+..+              
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~ii~iss~~~~~~--------------  145 (250)
T TIGR03206        85 VNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-----AGRIVNIASDAARVG--------------  145 (250)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CeEEEEECchhhccC--------------
Confidence            999997533  22456677899999999999999999999997754     579999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--------HHHHHHHHHHhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--------VVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  230 (288)
                       .+....|+.+|++++.++++++.++...+  |+++.++||++.|++.....        ....+....+.....+|+|+
T Consensus       146 -~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  222 (250)
T TIGR03206       146 -SSGEAVYAACKGGLVAFSKTMAREHARHG--ITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDL  222 (250)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHH
Confidence             45667899999999999999999998888  99999999999999754321        11222333444556789999


Q ss_pred             HHHHHHHhcCCCccCCCceeecc
Q 023054          231 AATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                      |+.+.++++ +...+++|+.|..
T Consensus       223 a~~~~~l~~-~~~~~~~g~~~~~  244 (250)
T TIGR03206       223 PGAILFFSS-DDASFITGQVLSV  244 (250)
T ss_pred             HHHHHHHcC-cccCCCcCcEEEe
Confidence            999999997 7888999998873

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=237.18  Aligned_cols=233  Identities=23%  Similarity=0.271  Sum_probs=190.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||.++|++|+++|++|++++|+.++++...+.+...  +.++.++.+|++|+++++++++++.+.++++|++
T Consensus        16 lItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~v   93 (259)
T PRK08213         16 LVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLERFGHVDIL   93 (259)
T ss_pred             EEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999998887777776543  4568889999999999999999999988899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHH-HHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDT-MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||....  ..+.+.+.|++++++|+.+++.+++++.++ |.+++     .++||++||..+..+.+.          
T Consensus        94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-----~~~~v~~sS~~~~~~~~~----------  158 (259)
T PRK08213         94 VNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-----YGRIINVASVAGLGGNPP----------  158 (259)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-----CeEEEEECChhhccCCCc----------
Confidence            999997533  235566889999999999999999999998 65543     479999999877653211          


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                       ...+...|+++|++++.++++++.++.+.+  |++|+|+||+++|++.....  .........+...+.+|+++|+.++
T Consensus       159 -~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  235 (259)
T PRK08213        159 -EVMDTIAYNTSKGAVINFTRALAAEWGPHG--IRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAAL  235 (259)
T ss_pred             -cccCcchHHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             123457899999999999999999999988  99999999999999765431  1111222334445568999999999


Q ss_pred             HHhcCCCccCCCceeeccC
Q 023054          236 YVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++++ +...+++|+.+..+
T Consensus       236 ~l~~-~~~~~~~G~~~~~~  253 (259)
T PRK08213        236 LLAS-DASKHITGQILAVD  253 (259)
T ss_pred             HHhC-ccccCccCCEEEEC
Confidence            9997 78889999988743

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-33  Score=235.30  Aligned_cols=233  Identities=25%  Similarity=0.245  Sum_probs=185.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||.+++++|+++|++|+++.+ +++..++..+.+...  +.++.++.+|++|.+++.++++++.+.++++|+
T Consensus         6 lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06123          6 IITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELGRLDA   83 (248)
T ss_pred             EEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            69999999999999999999999988874 555555555555443  456889999999999999999999999999999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ||||||...+   ..+.+.++|++++++|+.+++.+++++++.|.++...  .+|+||++||..+..+            
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~g~iv~~sS~~~~~~------------  149 (248)
T PRK06123         84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGG--RGGAIVNVSSMAARLG------------  149 (248)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--CCeEEEEECchhhcCC------------
Confidence            9999998643   2355677899999999999999999999999754210  1468999999987653            


Q ss_pred             CCCCCc-cccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHH
Q 023054          157 RAGYSD-KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       157 ~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                         .+. ...|+++|++++++++.++.++.+.|  |+|++|+||.+.|++.....   .........+..+..+|+|+++
T Consensus       150 ---~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~--i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~  224 (248)
T PRK06123        150 ---SPGEYIDYAASKGAIDTMTIGLAKEVAAEG--IRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVAR  224 (248)
T ss_pred             ---CCCCccchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence               222 24699999999999999999999988  99999999999999754321   1112222334455578999999


Q ss_pred             HHHHHhcCCCccCCCceeeccCc
Q 023054          233 TTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      .++|+++ +...+++|+.+..++
T Consensus       225 ~~~~l~~-~~~~~~~g~~~~~~g  246 (248)
T PRK06123        225 AILWLLS-DEASYTTGTFIDVSG  246 (248)
T ss_pred             HHHHHhC-ccccCccCCEEeecC
Confidence            9999997 567789999887443

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-33  Score=238.39  Aligned_cols=232  Identities=22%  Similarity=0.163  Sum_probs=191.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+..+...+++.......++.++.+|++|++++..+++++.+.++++|++
T Consensus        11 lItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~l   90 (276)
T PRK05875         11 LVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGV   90 (276)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988877777766544323578899999999999999999999989999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||....   ..+.+.+++.+++++|+.+++.+++++++.|.+..     .++|+++||..+..+             
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~~sS~~~~~~-------------  152 (276)
T PRK05875         91 VHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-----GGSFVGISSIAASNT-------------  152 (276)
T ss_pred             EECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEechhhcCC-------------
Confidence            999997532   23456678999999999999999999999997654     579999999886542             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHH----HHHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR----FLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~  233 (288)
                        .++...|+++|++++.+++.++.++...+  |++++|.||+++|++.........    .....+...+.+|+|+|+.
T Consensus       153 --~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  228 (276)
T PRK05875        153 --HRWFGAYGVTKSAVDHLMKLAADELGPSW--VRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANL  228 (276)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHH
Confidence              45568899999999999999999999988  999999999999998754311111    1112234455689999999


Q ss_pred             HHHHhcCCCccCCCceeeccCc
Q 023054          234 TCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      ++|+++ ....+++|+++..++
T Consensus       229 ~~~l~~-~~~~~~~g~~~~~~~  249 (276)
T PRK05875        229 AMFLLS-DAASWITGQVINVDG  249 (276)
T ss_pred             HHHHcC-chhcCcCCCEEEECC
Confidence            999997 566788999887443

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=4.1e-33  Score=233.79  Aligned_cols=227  Identities=24%  Similarity=0.280  Sum_probs=188.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|+.|++.+|+.+.+++....+     +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus        10 lItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936         10 LVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988777655443     3468889999999999999999999988999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||...+.  .+.+.+++++++++|+.+++.+++++.+.+.++.     .++||++||..+..+              
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~--------------  145 (245)
T PRK12936         85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-----YGRIINITSVVGVTG--------------  145 (245)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-----CCEEEEECCHHhCcC--------------
Confidence            9999986542  3456678999999999999999999999886654     579999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH--HHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM--RFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .+....|+.+|+++..+++.++.++...+  +++++|+||+++|++........  ......+..+..+|+++++.++|
T Consensus       146 -~~~~~~Y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~  222 (245)
T PRK12936        146 -NPGQANYCASKAGMIGFSKSLAQEIATRN--VTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAY  222 (245)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence             45667899999999999999999999888  99999999999999865432111  11222345556789999999999


Q ss_pred             HhcCCCccCCCceeec-cCc
Q 023054          237 VALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +++ +...+++|+++. ++|
T Consensus       223 l~~-~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        223 LAS-SEAAYVTGQTIHVNGG  241 (245)
T ss_pred             HcC-ccccCcCCCEEEECCC
Confidence            996 566789999887 444

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-33  Score=234.04  Aligned_cols=226  Identities=23%  Similarity=0.234  Sum_probs=187.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+++..+.+.+++...  +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus        10 lItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   87 (250)
T PRK07774         10 IVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYL   87 (250)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999988777777766544  3467889999999999999999999988999999


Q ss_pred             EEccccCCC-----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           81 INNAGIMFC-----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        81 v~~ag~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |||||+...     ..+.+.+++++++++|+.+++.++++++|+|.+.+     .++||++||..+.             
T Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~-------------  149 (250)
T PRK07774         88 VNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-----GGAIVNQSSTAAW-------------  149 (250)
T ss_pred             EECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-----CcEEEEEeccccc-------------
Confidence            999998642     22456678899999999999999999999997754     5799999998753             


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---HHHHHHHHHhhhcCChHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---VMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~  232 (288)
                           .+...|++||++++.+++++++++...+  |++++++||.+.|++......   .....+.++.....+|+++++
T Consensus       150 -----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~  222 (250)
T PRK07774        150 -----LYSNFYGLAKVGLNGLTQQLARELGGMN--IRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVG  222 (250)
T ss_pred             -----CCccccHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                 3457899999999999999999999888  999999999999998754311   112222334444668999999


Q ss_pred             HHHHHhcCCCccCCCceeeccC
Q 023054          233 TTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      .++++++ +...+++|++|..+
T Consensus       223 ~~~~~~~-~~~~~~~g~~~~v~  243 (250)
T PRK07774        223 MCLFLLS-DEASWITGQIFNVD  243 (250)
T ss_pred             HHHHHhC-hhhhCcCCCEEEEC
Confidence            9999996 55567889877743

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-33  Score=234.11  Aligned_cols=222  Identities=18%  Similarity=0.195  Sum_probs=184.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC--hHHHHHHHHHHHhcC-CCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS--IASIKDFAQNFIALN-LPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~-~~i   77 (288)
                      +||||++|||+++++.|+++|++|++++|+++..+...+++.... ...+.++.+|+++  .+++.++++++.+.+ +++
T Consensus        10 lItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~i   88 (239)
T PRK08703         10 LVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKL   88 (239)
T ss_pred             EEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999999999999988888777775542 3457788999986  568899999888877 789


Q ss_pred             ceEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           78 NILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        78 d~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      |+||||||....   ..+.+.+++++.+++|+.+++.++++++|.|.+..     .++||++||..+..+          
T Consensus        89 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~~ss~~~~~~----------  153 (239)
T PRK08703         89 DGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-----DASVIFVGESHGETP----------  153 (239)
T ss_pred             CEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-----CCEEEEEeccccccC----------
Confidence            999999997532   34566788999999999999999999999997754     589999999876542          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhccc-CCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHH
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEE-GVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~-~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                           .+....|++||++++.++++++.++... +  |+||+|.||++.|++........      ......++++++..
T Consensus       154 -----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~--i~v~~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~  220 (239)
T PRK08703        154 -----KAYWGGFGASKAALNYLCKVAADEWERFGN--LRANVLVPGPINSPQRIKSHPGE------AKSERKSYGDVLPA  220 (239)
T ss_pred             -----CCCccchHHhHHHHHHHHHHHHHHhccCCC--eEEEEEecCcccCccccccCCCC------CccccCCHHHHHHH
Confidence                 4566789999999999999999999876 5  99999999999999855321000      01124689999999


Q ss_pred             HHHHhcCCCccCCCceeec
Q 023054          234 TCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~  252 (288)
                      ++|+++ +.+.++||+.+.
T Consensus       221 ~~~~~~-~~~~~~~g~~~~  238 (239)
T PRK08703        221 FVWWAS-AESKGRSGEIVY  238 (239)
T ss_pred             HHHHhC-ccccCcCCeEee
Confidence            999997 889999999764

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-33  Score=235.38  Aligned_cols=226  Identities=24%  Similarity=0.283  Sum_probs=184.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+....++..+++     .  ..++++|++++++++++++++.+..+++|++
T Consensus        11 lItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057         11 VITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----G--GLFVPTDVTDEDAVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             EEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C--CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999987766555443     1  2578899999999999999998888899999


Q ss_pred             EEccccCCCC----CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFCP----YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||...+.    .+.+.+++++.+++|+.+++.+++.++|+|.+++     .++||++||..+..+            
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~g~iv~~sS~~~~~g------------  146 (255)
T PRK06057         84 FNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-----KGSIINTASFVAVMG------------  146 (255)
T ss_pred             EECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-----CcEEEEEcchhhccC------------
Confidence            9999976431    2455678999999999999999999999998754     579999999876553            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---H--HHHHHHHHHhhhcCChHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---V--VMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~--~~~~~~~~~~~~~~~~~~~a  231 (288)
                        ...+...|+.+|+++..+++.++.++..+|  |+|++|+||+++|++.....   .  ..+.....+...+.+|++++
T Consensus       147 --~~~~~~~Y~~sKaal~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  222 (255)
T PRK06057        147 --SATSQISYTASKGGVLAMSRELGVQFARQG--IRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIA  222 (255)
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence              112456899999999999999999999988  99999999999999865321   0  01111122344568899999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +.+.+|++ +...+++|..|. +++
T Consensus       223 ~~~~~l~~-~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        223 AAVAFLAS-DDASFITASTFLVDGG  246 (255)
T ss_pred             HHHHHHhC-ccccCccCcEEEECCC
Confidence            99999997 678899999776 443

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-33  Score=236.08  Aligned_cols=225  Identities=21%  Similarity=0.232  Sum_probs=184.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+.+     +.++.++++|++|.++++++++.+.+.++++|++
T Consensus         7 lItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          7 FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988776654433     3458888999999999999999999888999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++.+++|+.+++.+++.++|.|++..     .++||++||..+..+              
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~vsS~~~~~~--------------  142 (275)
T PRK08263         82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-----SGHIIQISSIGGISA--------------  142 (275)
T ss_pred             EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEEcChhhcCC--------------
Confidence            999998754  23566788999999999999999999999998754     579999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------hHH----HHHHHHHHhhhc-CC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------AVV----MRFLKFFSFFLW-KN  226 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------~~~----~~~~~~~~~~~~-~~  226 (288)
                       .+....|+++|++++.+++.++.+++..|  |+|++|+||++.|++....       ...    .......+.... .+
T Consensus       143 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (275)
T PRK08263        143 -FPMSGIYHASKWALEGMSEALAQEVAEFG--IKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGD  219 (275)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCC
Confidence             55667899999999999999999999988  9999999999999987321       011    112222344555 78


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeeccCc
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      |+++|+.+++++..+   ...++++...+
T Consensus       220 p~dva~~~~~l~~~~---~~~~~~~~~~~  245 (275)
T PRK08263        220 PEAAAEALLKLVDAE---NPPLRLFLGSG  245 (275)
T ss_pred             HHHHHHHHHHHHcCC---CCCeEEEeCch
Confidence            999999999999632   23467775443

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=8.6e-33  Score=231.42  Aligned_cols=230  Identities=23%  Similarity=0.234  Sum_probs=190.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|+++.| +.+..++...++...  +.++.++.+|++|+++++++++++.+.++++|+
T Consensus         4 lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (242)
T TIGR01829         4 LVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV   81 (242)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence            69999999999999999999999999988 666565555554433  457899999999999999999999998899999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||...+  ..+.+.+++++.+.+|+.+++.+++.++|.|.+.+     .++||++||..+..+             
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~-------------  143 (242)
T TIGR01829        82 LVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-----WGRIINISSVNGQKG-------------  143 (242)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEcchhhcCC-------------
Confidence            9999997654  23556678999999999999999999999998754     579999999876652             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        ..+...|+.+|+++..+++.++.++...+  |+++++.||++.|++.....  ....+....+...+.+|+++++.+.
T Consensus       144 --~~~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  219 (242)
T TIGR01829       144 --QFGQTNYSAAKAGMIGFTKALAQEGATKG--VTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVA  219 (242)
T ss_pred             --CCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              45678899999999999999999999888  99999999999999875431  1112222334556679999999999


Q ss_pred             HHhcCCCccCCCceeec-cCc
Q 023054          236 YVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |+++ +...+++|+.+. +++
T Consensus       220 ~l~~-~~~~~~~G~~~~~~gg  239 (242)
T TIGR01829       220 FLAS-EEAGYITGATLSINGG  239 (242)
T ss_pred             HHcC-chhcCccCCEEEecCC
Confidence            9997 667789999887 444

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=3.3e-34  Score=225.59  Aligned_cols=222  Identities=23%  Similarity=0.252  Sum_probs=189.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ++||+.+|||++++++|+++|..+.++.-+.+.. +...+++...|..++.|++||+++..++++.++++...++.+|++
T Consensus         9 ~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIl   87 (261)
T KOG4169|consen    9 LVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDIL   87 (261)
T ss_pred             EEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEE
Confidence            5899999999999999999999887777766663 456677888889999999999999999999999999999999999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+||+.      ++.+|++++.+|+.|.++-+...+|+|.+..  .+.+|-|||+||.+|..+               .
T Consensus        88 INgAGi~------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~--gG~GGiIvNmsSv~GL~P---------------~  144 (261)
T KOG4169|consen   88 INGAGIL------DDKDWERTINVNLTGVINGTQLALPYMDKKQ--GGKGGIIVNMSSVAGLDP---------------M  144 (261)
T ss_pred             Ecccccc------cchhHHHhhccchhhhhhhhhhhhhhhhhhc--CCCCcEEEEeccccccCc---------------c
Confidence            9999986      4577999999999999999999999998753  334789999999998875               6


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhc--ccCCceEEEEeeCCcccCCCCCCC-------hHHHHHHHHHHhhhcCChHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQ--EEGVNITANSVHPGLIMTNLFKHS-------AVVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~--~~~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a  231 (288)
                      +-.+.|++||+++.+|+|++|...-  ..|  |++++||||++.|++..++       +....+...+......+|..++
T Consensus       145 p~~pVY~AsKaGVvgFTRSla~~ayy~~sG--V~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a  222 (261)
T KOG4169|consen  145 PVFPVYAASKAGVVGFTRSLADLAYYQRSG--VRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCA  222 (261)
T ss_pred             ccchhhhhcccceeeeehhhhhhhhHhhcC--EEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHH
Confidence            6778999999999999999988754  447  9999999999999987655       1223344555666678999999


Q ss_pred             HHHHHHhcCCCccCCCceeec
Q 023054          232 ATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      +.++.++.  .  ..+|..|.
T Consensus       223 ~~~v~aiE--~--~~NGaiw~  239 (261)
T KOG4169|consen  223 INIVNAIE--Y--PKNGAIWK  239 (261)
T ss_pred             HHHHHHHh--h--ccCCcEEE
Confidence            99999996  2  66888665

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.6e-33  Score=261.18  Aligned_cols=217  Identities=24%  Similarity=0.243  Sum_probs=183.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++++.+.+...  +.++.++.+|++|.+++.++++++.+.++++|+|
T Consensus       319 lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l  396 (582)
T PRK05855        319 VVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIV  396 (582)
T ss_pred             EEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            69999999999999999999999999999999888888877655  4578999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++++.++++|+.+++.++++++|.|.+++.    +|+||++||.++..+              
T Consensus       397 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~----~g~iv~~sS~~~~~~--------------  458 (582)
T PRK05855        397 VNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT----GGHIVNVASAAAYAP--------------  458 (582)
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEECChhhccC--------------
Confidence            999998654  236677899999999999999999999999987531    479999999988763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH----------HHHHHHHHhhhcCChH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV----------MRFLKFFSFFLWKNVP  228 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~  228 (288)
                       .++...|++||+++++++++++.+++..|  |+|++|+||+++|++.......          .............+|+
T Consensus       459 -~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  535 (582)
T PRK05855        459 -SRSLPAYATSKAAVLMLSECLRAELAAAG--IGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPE  535 (582)
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHH
Confidence             56678999999999999999999999998  9999999999999987653110          0111112223345899


Q ss_pred             HHHHHHHHHhcC
Q 023054          229 QGAATTCYVALH  240 (288)
Q Consensus       229 ~~a~~~~~l~~~  240 (288)
                      ++|+.+++++..
T Consensus       536 ~va~~~~~~~~~  547 (582)
T PRK05855        536 KVAKAIVDAVKR  547 (582)
T ss_pred             HHHHHHHHHHHc
Confidence            999999999974

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-33  Score=232.08  Aligned_cols=220  Identities=23%  Similarity=0.233  Sum_probs=183.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+++..+++.+.+...  +.++.++.+|+++++++.++++.+.+.++++|+|
T Consensus        10 lItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   87 (241)
T PRK07454         10 LITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVL   87 (241)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999998887777776543  4578899999999999999999999989999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||.....  .+.+.+++++++++|+.+++.+++.++|+|.++.     .++||++||..+..+              
T Consensus        88 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~--------------  148 (241)
T PRK07454         88 INNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-----GGLIINVSSIAARNA--------------  148 (241)
T ss_pred             EECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-----CcEEEEEccHHhCcC--------------
Confidence            9999986532  3456678999999999999999999999998754     579999999987642              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|+.+|++++.+++.++.++...|  |++++|.||+++|++.......    .........+|+++|+.+++++
T Consensus       149 -~~~~~~Y~~sK~~~~~~~~~~a~e~~~~g--i~v~~i~pg~i~t~~~~~~~~~----~~~~~~~~~~~~~va~~~~~l~  221 (241)
T PRK07454        149 -FPQWGAYCVSKAALAAFTKCLAEEERSHG--IRVCTITLGAVNTPLWDTETVQ----ADFDRSAMLSPEQVAQTILHLA  221 (241)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCcccCCcccccccc----cccccccCCCHHHHHHHHHHHH
Confidence             45667899999999999999999999888  9999999999999986532111    1112234578999999999999


Q ss_pred             cCCCccCCCc
Q 023054          239 LHPNLKGVTG  248 (288)
Q Consensus       239 ~~~~~~~~tG  248 (288)
                      +.+....+.+
T Consensus       222 ~~~~~~~~~~  231 (241)
T PRK07454        222 QLPPSAVIED  231 (241)
T ss_pred             cCCccceeee
Confidence            8554444333

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.2e-32  Score=230.97  Aligned_cols=230  Identities=22%  Similarity=0.198  Sum_probs=187.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|+... .++....+..  .+.++.++.+|+++.+++.++++.+.+.++++|+
T Consensus         6 lItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   83 (245)
T PRK12824          6 LVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI   83 (245)
T ss_pred             EEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999999998542 2222222222  2456899999999999999999999998999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||+|....  ..+.+.+++++++++|+.+++.+++.++|.|.+.+     .++||++||..+..+             
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~iss~~~~~~-------------  145 (245)
T PRK12824         84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-----YGRIINISSVNGLKG-------------  145 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-----CeEEEEECChhhccC-------------
Confidence            9999998643  23567788999999999999999999999998754     579999999887642             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|+++|++++++++.++.++.+.+  |+++++.||++.|++.......  ..+....+.....+++++++.+.
T Consensus       146 --~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  221 (245)
T PRK12824        146 --QFGQTNYSAAKAGMIGFTKALASEGARYG--ITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVA  221 (245)
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence              45667899999999999999999999888  9999999999999986644211  11222234445679999999999


Q ss_pred             HHhcCCCccCCCceeeccCc
Q 023054          236 YVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~~  255 (288)
                      ++++ +...+++|+.+..++
T Consensus       222 ~l~~-~~~~~~~G~~~~~~~  240 (245)
T PRK12824        222 FLVS-EAAGFITGETISING  240 (245)
T ss_pred             HHcC-ccccCccCcEEEECC
Confidence            9996 667889999887443

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=234.15  Aligned_cols=226  Identities=19%  Similarity=0.186  Sum_probs=183.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ...+.++.+|++++++++++++++.+.++++|+|
T Consensus         4 lItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (272)
T PRK07832          4 FVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSMDVV   82 (272)
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            699999999999999999999999999999988888777776542 2335668899999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|....  ..+.+.++++..+++|+.+++.++++++|.|.+++.    .++||++||..+..               
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~g~ii~isS~~~~~---------------  143 (272)
T PRK07832         83 MNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR----GGHLVNVSSAAGLV---------------  143 (272)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CcEEEEEccccccC---------------
Confidence            999997543  336677889999999999999999999999976421    47999999987654               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-----H----HHHHHHHHhhhcCChHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-----V----MRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-----~----~~~~~~~~~~~~~~~~~  229 (288)
                      +.+....|+++|+++.++++.++.++...+  |+|++|+||+++|++......     .    ...... ......+|++
T Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  220 (272)
T PRK07832        144 ALPWHAAYSASKFGLRGLSEVLRFDLARHG--IGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEK  220 (272)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHH
Confidence            245667899999999999999999999888  999999999999998654210     0    111111 1223469999


Q ss_pred             HHHHHHHHhcCCCccCCCceee
Q 023054          230 GAATTCYVALHPNLKGVTGKYF  251 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~  251 (288)
                      +|..+++++.  ..+++++.-+
T Consensus       221 vA~~~~~~~~--~~~~~~~~~~  240 (272)
T PRK07832        221 AAEKILAGVE--KNRYLVYTSP  240 (272)
T ss_pred             HHHHHHHHHh--cCCeEEecCc
Confidence            9999999995  4456555543

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.2e-33  Score=235.60  Aligned_cols=210  Identities=27%  Similarity=0.264  Sum_probs=173.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+.+++++...        ..+.++.+|++|.++++++++++.+.++++|+|
T Consensus         7 lItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~--------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~l   78 (273)
T PRK06182          7 LVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS--------LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVL   78 (273)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            699999999999999999999999999999877654321        247889999999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++++..+++|+.+++.+++.++|.|.+..     .++||++||..+..+              
T Consensus        79 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~g~iv~isS~~~~~~--------------  139 (273)
T PRK06182         79 VNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-----SGRIINISSMGGKIY--------------  139 (273)
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEcchhhcCC--------------
Confidence            999998643  23567788999999999999999999999998764     579999999876542              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----------HH-------HHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----------VV-------MRFLKFFS  220 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----------~~-------~~~~~~~~  220 (288)
                       .+....|+++|+++++|+++++.++++.|  |+|++|+||+++|++.....           ..       ..+....+
T Consensus       140 -~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (273)
T PRK06182        140 -TPLGAWYHATKFALEGFSDALRLEVAPFG--IDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYG  216 (273)
T ss_pred             -CCCccHhHHHHHHHHHHHHHHHHHhcccC--CEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhc
Confidence             34456799999999999999999999988  99999999999999753210           00       01112223


Q ss_pred             hhhcCChHHHHHHHHHHhcC
Q 023054          221 FFLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       221 ~~~~~~~~~~a~~~~~l~~~  240 (288)
                      ...+.+|+++|+.++++++.
T Consensus       217 ~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        217 SGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             cccCCCHHHHHHHHHHHHhC
Confidence            45667999999999999973

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=232.22  Aligned_cols=230  Identities=24%  Similarity=0.260  Sum_probs=190.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||++++++|+++|++|++++|+.+..++..+++.   .+.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         9 lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~v   85 (252)
T PRK06138          9 IVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVL   85 (252)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999888777766665   24678999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|.....  .+.+.+++++.+++|+.+++.+++.+++.|.+..     .++|+++||..+..+              
T Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~ii~~sS~~~~~~--------------  146 (252)
T PRK06138         86 VNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-----GGSIVNTASQLALAG--------------  146 (252)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-----CeEEEEECChhhccC--------------
Confidence            9999986542  3456788999999999999999999999998754     579999999987652              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HHHHHHH----HHhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VMRFLKF----FSFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~----~~~~~~~~~~~~  230 (288)
                       .++...|+.+|++++.+++.++.++...|  |+|++++||++.|++......    .......    .+...+.+++++
T Consensus       147 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  223 (252)
T PRK06138        147 -GRGRAAYVASKGAIASLTRAMALDHATDG--IRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEV  223 (252)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHH
Confidence             45668899999999999999999999888  999999999999998653210    0111111    122235689999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+.+++++. +...+++|.++. ++++
T Consensus       224 a~~~~~l~~-~~~~~~~g~~~~~~~g~  249 (252)
T PRK06138        224 AQAALFLAS-DESSFATGTTLVVDGGW  249 (252)
T ss_pred             HHHHHHHcC-chhcCccCCEEEECCCe
Confidence            999999996 667889999776 4443

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.3e-33  Score=216.49  Aligned_cols=176  Identities=29%  Similarity=0.314  Sum_probs=160.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|.+.|.+|++++|++++++++.++.      ..+..+.||+.|.++.+++++++++.++.+++|
T Consensus         9 LITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           9 LITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN------PEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             EEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC------cchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            69999999999999999999999999999999999887763      458889999999999999999999999999999


Q ss_pred             EEccccCCCCC----CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFCPY----QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||++....    +...++.++.+++|+.+++.|++.|+|++.+++     .+.||+|||..+..+            
T Consensus        83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-----~a~IInVSSGLafvP------------  145 (245)
T COG3967          83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-----EATIINVSSGLAFVP------------  145 (245)
T ss_pred             eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-----CceEEEeccccccCc------------
Confidence            99999986522    334566788999999999999999999999886     689999999988764            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN  204 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~  204 (288)
                         ....+.||++|+|++.|+.+|+.++...+  |.|.-+.|..|+|+
T Consensus       146 ---m~~~PvYcaTKAaiHsyt~aLR~Qlk~t~--veVIE~~PP~V~t~  188 (245)
T COG3967         146 ---MASTPVYCATKAAIHSYTLALREQLKDTS--VEVIELAPPLVDTT  188 (245)
T ss_pred             ---ccccccchhhHHHHHHHHHHHHHHhhhcc--eEEEEecCCceecC
Confidence               55678899999999999999999999988  99999999999996

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-33  Score=236.08  Aligned_cols=206  Identities=27%  Similarity=0.275  Sum_probs=178.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+++.+++..+++.      ++.++.+|++|.+++.++++.+.+.++++|++
T Consensus         9 lVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          9 AITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999988877666542      47889999999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+.+++++++|+.+++.+++.++|.|.+++     .++||++||..+..+              
T Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  143 (273)
T PRK07825         83 VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-----RGHVVNVASLAGKIP--------------  143 (273)
T ss_pred             EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCEEEEEcCccccCC--------------
Confidence            999998654  23556678999999999999999999999998765     589999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|++||+++.+|+++++.++...|  |+|++|+||++.|++......       .......+|+++|+.+++++
T Consensus       144 -~~~~~~Y~asKaa~~~~~~~l~~el~~~g--i~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~~~~va~~~~~~l  213 (273)
T PRK07825        144 -VPGMATYCASKHAVVGFTDAARLELRGTG--VHVSVVLPSFVNTELIAGTGG-------AKGFKNVEPEDVAAAIVGTV  213 (273)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCcCcchhhccccc-------ccCCCCCCHHHHHHHHHHHH
Confidence             56778999999999999999999999988  999999999999998765421       11223568999999999999


Q ss_pred             cCC
Q 023054          239 LHP  241 (288)
Q Consensus       239 ~~~  241 (288)
                      .++
T Consensus       214 ~~~  216 (273)
T PRK07825        214 AKP  216 (273)
T ss_pred             hCC
Confidence            743

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-32  Score=232.79  Aligned_cols=215  Identities=20%  Similarity=0.185  Sum_probs=182.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++...++...  +.++.++.+|+++++++.++++++.+.++++|+|
T Consensus         4 lVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          4 MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999888888877654  4578899999999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++++++|+.+++.+++.++|.|.+..     .++||++||..+..+              
T Consensus        82 I~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~vsS~~~~~~--------------  142 (270)
T PRK05650         82 VNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-----SGRIVNIASMAGLMQ--------------  142 (270)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-----CCEEEEECChhhcCC--------------
Confidence            999998654  33566688999999999999999999999997754     579999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|+++|+++.+++++++.++...|  |+|++|+||+++|++.....    ...............+++++|+.+
T Consensus       143 -~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i  219 (270)
T PRK05650        143 -GPAMSSYNVAKAGVVALSETLLVELADDE--IGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYI  219 (270)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHH
Confidence             56678999999999999999999999988  99999999999999876431    111112222233346899999999


Q ss_pred             HHHhc
Q 023054          235 CYVAL  239 (288)
Q Consensus       235 ~~l~~  239 (288)
                      +..+.
T Consensus       220 ~~~l~  224 (270)
T PRK05650        220 YQQVA  224 (270)
T ss_pred             HHHHh
Confidence            99996

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.7e-32  Score=230.50  Aligned_cols=227  Identities=22%  Similarity=0.267  Sum_probs=185.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +||||++|||.+++++|+++|++|+++.+ +++..++..+.+...  +.++.++.+|+++.+++.++++++.+.++++|+
T Consensus        10 lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (247)
T PRK12935         10 IVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI   87 (247)
T ss_pred             EEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999987654 456666665666543  457899999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||.....  .+.+.+++++.+++|+.+++.++++++|.|.+..     .++||++||..+..+             
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-------------  149 (247)
T PRK12935         88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-----EGRIISISSIIGQAG-------------  149 (247)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEcchhhcCC-------------
Confidence            99999986542  2456688999999999999999999999997654     579999999887652             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|+++|++++++++.++.++.+.+  |+++.++||++.|++......  ........+...+..|+|+++.++
T Consensus       150 --~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  225 (247)
T PRK12935        150 --GFGQTNYSAAKAGMLGFTKSLALELAKTN--VTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVV  225 (247)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHH
Confidence              45668999999999999999999998888  999999999999988664421  112222334455679999999999


Q ss_pred             HHhcCCCccCCCceeecc
Q 023054          236 YVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~  253 (288)
                      +++. + ..+++|+.+..
T Consensus       226 ~~~~-~-~~~~~g~~~~i  241 (247)
T PRK12935        226 YLCR-D-GAYITGQQLNI  241 (247)
T ss_pred             HHcC-c-ccCccCCEEEe
Confidence            9995 3 45789987763

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=236.88  Aligned_cols=209  Identities=20%  Similarity=0.199  Sum_probs=175.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.+++.++++++.+.++++|++
T Consensus        44 lItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~l  121 (293)
T PRK05866         44 LLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVEKRIGGVDIL  121 (293)
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999888887777554  4568899999999999999999999999999999


Q ss_pred             EEccccCCCCC--C--CCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFCPY--Q--ISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~~~--~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||......  +  .+.++++.++++|+.+++.+++.++|+|.+..     .++||++||..+...            
T Consensus       122 i~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~------------  184 (293)
T PRK05866        122 INNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-----DGHIINVATWGVLSE------------  184 (293)
T ss_pred             EECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CcEEEEECChhhcCC------------
Confidence            99999865422  1  12356788999999999999999999998764     589999999754321            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                        ..+....|++||+|+++|+++++.++...+  |+|++|+||+++|++......       .......+|+++|+.++.
T Consensus       185 --~~p~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~pg~v~T~~~~~~~~-------~~~~~~~~pe~vA~~~~~  253 (293)
T PRK05866        185 --ASPLFSVYNASKAALSAVSRVIETEWGDRG--VHSTTLYYPLVATPMIAPTKA-------YDGLPALTADEAAEWMVT  253 (293)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEcCcccCcccccccc-------ccCCCCCCHHHHHHHHHH
Confidence              134567899999999999999999999998  999999999999998764311       011224689999999999


Q ss_pred             Hhc
Q 023054          237 VAL  239 (288)
Q Consensus       237 l~~  239 (288)
                      .+.
T Consensus       254 ~~~  256 (293)
T PRK05866        254 AAR  256 (293)
T ss_pred             HHh
Confidence            996

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=8.7e-33  Score=232.90  Aligned_cols=221  Identities=25%  Similarity=0.282  Sum_probs=183.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.         +...  +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus        12 lItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220         12 WVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999986         1111  4568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|....  ..+.+.+++++.+++|+.+++.++++++|.|.+..     .++||++||..+..+              
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~~ss~~~~~~--------------  141 (252)
T PRK08220         81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-----SGAIVTVGSNAAHVP--------------  141 (252)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CCEEEEECCchhccC--------------
Confidence            999998643  23556788999999999999999999999998754     579999999876542              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH------------HHHHHHHHHhhhcCC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV------------VMRFLKFFSFFLWKN  226 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~------------~~~~~~~~~~~~~~~  226 (288)
                       .++...|+.+|++++.+++.++.++...|  |+||++.||++.|++......            ........+...+.+
T Consensus       142 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (252)
T PRK08220        142 -RIGMAAYGASKAALTSLAKCVGLELAPYG--VRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIAR  218 (252)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhhHhC--eEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCC
Confidence             45678899999999999999999999988  999999999999997543200            011112234456779


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |+|+|+.++||++ +...+++|+.+. ++|
T Consensus       219 ~~dva~~~~~l~~-~~~~~~~g~~i~~~gg  247 (252)
T PRK08220        219 PQEIANAVLFLAS-DLASHITLQDIVVDGG  247 (252)
T ss_pred             HHHHHHHHHHHhc-chhcCccCcEEEECCC
Confidence            9999999999997 678899999876 444

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-33  Score=233.45  Aligned_cols=225  Identities=23%  Similarity=0.237  Sum_probs=176.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC----hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN----MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||++|||+++|+.|+++|++|++++++    .+..++..+++...  +.++.++++|++++++++++++++.+.+++
T Consensus        12 lItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   89 (257)
T PRK12744         12 LIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDDAKAAFGR   89 (257)
T ss_pred             EEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHHHHHhhCC
Confidence            689999999999999999999997776543    34455555555443  457889999999999999999999998899


Q ss_pred             cceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEE-cCccccccccCCccccC
Q 023054           77 LNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNL-SSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        77 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~v-sS~~~~~~~~~~~~~~~  153 (288)
                      +|++|||||....  ..+.+.+++++++++|+.+++.++++++|.|..       .++++++ ||..+..          
T Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~~~iv~~~ss~~~~~----------  152 (257)
T PRK12744         90 PDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-------NGKIVTLVTSLLGAF----------  152 (257)
T ss_pred             CCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-------CCCEEEEecchhccc----------
Confidence            9999999998643  235567789999999999999999999999864       3577776 4544322          


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHH------HHHHHH--hhhcC
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR------FLKFFS--FFLWK  225 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~------~~~~~~--~~~~~  225 (288)
                            .+....|++||+|++.|+++++.++.++|  |+||+|+||++.|++..+......      .....+  ..++.
T Consensus       153 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (257)
T PRK12744        153 ------TPFYSAYAGSKAPVEHFTRAASKEFGARG--ISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLT  224 (257)
T ss_pred             ------CCCcccchhhHHHHHHHHHHHHHHhCcCc--eEEEEEecCccccchhccccccchhhcccccccccccccCCCC
Confidence                  34567899999999999999999999988  999999999999997643211110      000111  12567


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +|+|+|+.++||++ + ..+++|+.+..+
T Consensus       225 ~~~dva~~~~~l~~-~-~~~~~g~~~~~~  251 (257)
T PRK12744        225 DIEDIVPFIRFLVT-D-GWWITGQTILIN  251 (257)
T ss_pred             CHHHHHHHHHHhhc-c-cceeecceEeec
Confidence            89999999999997 4 578999877633

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-32  Score=231.65  Aligned_cols=231  Identities=21%  Similarity=0.197  Sum_probs=189.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +||||++|||++++++|+++|++ |++++|+.+..+...+++...  +.++.++.+|+++++++.++++.+.+.++++|+
T Consensus        10 lItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (260)
T PRK06198         10 LVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEAFGRLDA   87 (260)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            68999999999999999999998 999999988777766666433  567888999999999999999999988899999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      +|||+|.....  .+.+.+.++.++++|+.+++.+++.+++.|.++..    .++||++||..+..              
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~g~iv~~ss~~~~~--------------  149 (260)
T PRK06198         88 LVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA----EGTIVNIGSMSAHG--------------  149 (260)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CCEEEEECCccccc--------------
Confidence            99999986532  25577888999999999999999999999976421    47999999988754              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---------hHHHHHHHHHHhhhcCChH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---------AVVMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~  228 (288)
                       +.+....|+.+|+++++++++++.++...+  |+|++|+||++.|++....         .+........+...+.+++
T Consensus       150 -~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (260)
T PRK06198        150 -GQPFLAAYCASKGALATLTRNAAYALLRNR--IRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPD  226 (260)
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHH
Confidence             245567899999999999999999999988  9999999999999874321         0111111122334456899


Q ss_pred             HHHHHHHHHhcCCCccCCCceeeccCc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      ++++.++++++ +...+++|++|..++
T Consensus       227 ~~a~~~~~l~~-~~~~~~~G~~~~~~~  252 (260)
T PRK06198        227 EVARAVAFLLS-DESGLMTGSVIDFDQ  252 (260)
T ss_pred             HHHHHHHHHcC-hhhCCccCceEeECC
Confidence            99999999997 677899999887443

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-32  Score=230.34  Aligned_cols=228  Identities=21%  Similarity=0.194  Sum_probs=181.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|+++.+ +.+..+.+.+++...  +.++.++.+|++|.+++.++++++.+.++++|+
T Consensus        13 lItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~   90 (258)
T PRK09134         13 LVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASAALGPITL   90 (258)
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999988766 455666666666544  457889999999999999999999988899999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||....  ..+.+.+++++++++|+.+++.+++.+.+++.+..     .++||+++|..+..+             
T Consensus        91 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~~s~~~~~~-------------  152 (258)
T PRK09134         91 LVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-----RGLVVNMIDQRVWNL-------------  152 (258)
T ss_pred             EEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CceEEEECchhhcCC-------------
Confidence            9999998654  23566788999999999999999999999997653     579999988765432             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                        .+....|++||+++++++++++.++...   |+||+|+||++.|+...............+.....+|+|+|+.++++
T Consensus       153 --~p~~~~Y~~sK~a~~~~~~~la~~~~~~---i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~  227 (258)
T PRK09134        153 --NPDFLSYTLSKAALWTATRTLAQALAPR---IRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYL  227 (258)
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhcCC---cEEEEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              3445689999999999999999998753   99999999999887533222122222223344557899999999999


Q ss_pred             hcCCCccCCCceeec-cCcc
Q 023054          238 ALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +++   .+++|+.+. +++.
T Consensus       228 ~~~---~~~~g~~~~i~gg~  244 (258)
T PRK09134        228 LDA---PSVTGQMIAVDGGQ  244 (258)
T ss_pred             hcC---CCcCCCEEEECCCe
Confidence            962   467898776 4443

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=2.2e-32  Score=215.35  Aligned_cols=225  Identities=29%  Similarity=0.344  Sum_probs=180.6

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEE-EeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc--CCC
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL--NLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~--~~~   76 (288)
                      +||||++|||..++++|.+. |..+++ +.|+++.+.+..+.....  ..+++.+++|+++.+++..+++++.+.  ..+
T Consensus         7 ~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~--d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~G   84 (249)
T KOG1611|consen    7 FITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKS--DSRVHIIQLDVTCDESIDNFVQEVEKIVGSDG   84 (249)
T ss_pred             EEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc--CCceEEEEEecccHHHHHHHHHHHHhhcccCC
Confidence            58999999999999999974 555544 556677753322222222  578999999999999999999999987  457


Q ss_pred             cceEEEccccCCCCC---CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC------CCCCeEEEEcCccccccccC
Q 023054           77 LNILINNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET------GIEGRIVNLSSIAHQYTYKG  147 (288)
Q Consensus        77 id~lv~~ag~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~------~~~g~iv~vsS~~~~~~~~~  147 (288)
                      +|+||+|||+..+..   +.+.+.|.+.+++|..|++.++|+|+|++++.....      ...+.|||+||.++...   
T Consensus        85 lnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~---  161 (249)
T KOG1611|consen   85 LNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG---  161 (249)
T ss_pred             ceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC---
Confidence            999999999986533   334466899999999999999999999998865321      12467999999887743   


Q ss_pred             CccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCCh
Q 023054          148 GIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (288)
                      +         ....++.+|..||+|++.|+|+++.++.+.+  |-|..+|||||.|+|.....             ..++
T Consensus       162 ~---------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~--ilv~sihPGwV~TDMgg~~a-------------~ltv  217 (249)
T KOG1611|consen  162 G---------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDH--ILVVSIHPGWVQTDMGGKKA-------------ALTV  217 (249)
T ss_pred             C---------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCc--EEEEEecCCeEEcCCCCCCc-------------ccch
Confidence            1         1245778999999999999999999999998  99999999999999987552             2489


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeeccCc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      |+.+..++.-.. .....-+|.||+.++
T Consensus       218 eeSts~l~~~i~-kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  218 EESTSKLLASIN-KLKNEHNGGFFNRDG  244 (249)
T ss_pred             hhhHHHHHHHHH-hcCcccCcceEccCC
Confidence            999999999886 566777999998544

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.5e-33  Score=231.33  Aligned_cols=215  Identities=26%  Similarity=0.303  Sum_probs=173.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+....      .     ..++.++.+|++++      ++++.+.++++|+|
T Consensus         9 lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~------~~~~~~~~~~id~l   71 (235)
T PRK06550          9 LITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD------LEPLFDWVPSVDIL   71 (235)
T ss_pred             EEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH------HHHHHHhhCCCCEE
Confidence            6899999999999999999999999999985421      0     24688999999987      34444456789999


Q ss_pred             EEccccCC---CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||...   +..+.+.+++++.+++|+.+++.++++++|.|.+++     .++||++||..+..+             
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-------------  133 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-----SGIIINMCSIASFVA-------------  133 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcChhhccC-------------
Confidence            99999753   233566788999999999999999999999997754     589999999987653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-h---HHHHHHHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-A---VVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                        .++...|+.+|++++.+++.++.++..+|  |+||+|+||+++|++.... .   .........+..++.+|+++|+.
T Consensus       134 --~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  209 (235)
T PRK06550        134 --GGGGAAYTASKHALAGFTKQLALDYAKDG--IQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAEL  209 (235)
T ss_pred             --CCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHH
Confidence              45667899999999999999999999988  9999999999999986422 1   11112223345567899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      ++|+++ +...+++|+.+. ++|
T Consensus       210 ~~~l~s-~~~~~~~g~~~~~~gg  231 (235)
T PRK06550        210 TLFLAS-GKADYMQGTIVPIDGG  231 (235)
T ss_pred             HHHHcC-hhhccCCCcEEEECCc
Confidence            999997 677899999877 444

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=232.92  Aligned_cols=206  Identities=23%  Similarity=0.277  Sum_probs=175.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++...  + ++.++.+|+++.+++.++++++.+.++.+|+|
T Consensus         6 lItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~l   82 (257)
T PRK07024          6 FITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGLPDVV   82 (257)
T ss_pred             EEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            69999999999999999999999999999988877766655322  2 78999999999999999999999988999999


Q ss_pred             EEccccCCCCC---CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||......   +.+.++++.++++|+.+++.+++.++|.|.+.+     .++||++||..+..+             
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-----~~~iv~isS~~~~~~-------------  144 (257)
T PRK07024         83 IANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-----RGTLVGIASVAGVRG-------------  144 (257)
T ss_pred             EECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-----CCEEEEEechhhcCC-------------
Confidence            99999864321   245678999999999999999999999997765     589999999987763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                        .+....|++||++++.++++++.++...+  |+|++|+||++.|++......        +.....+|+++|+.++..
T Consensus       145 --~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~~a~~~~~~  212 (257)
T PRK07024        145 --LPGAGAYSASKAAAIKYLESLRVELRPAG--VRVVTIAPGYIRTPMTAHNPY--------PMPFLMDADRFAARAARA  212 (257)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCcCchhhcCCC--------CCCCccCHHHHHHHHHHH
Confidence              56677899999999999999999999988  999999999999997643211        111235899999999999


Q ss_pred             hc
Q 023054          238 AL  239 (288)
Q Consensus       238 ~~  239 (288)
                      +.
T Consensus       213 l~  214 (257)
T PRK07024        213 IA  214 (257)
T ss_pred             Hh
Confidence            96

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-32  Score=231.78  Aligned_cols=229  Identities=24%  Similarity=0.229  Sum_probs=188.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||+++++.|+++|++|++++|+++..++..+.+...  +.++.++.+|+++.+++.++++.+.+.++++|+|
T Consensus        11 lItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   88 (262)
T PRK13394         11 VVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDIL   88 (262)
T ss_pred             EEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888888777654  4568899999999999999999998888999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHH-HHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTM-NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||.....  .+.+.++++..+++|+.+++.+++.+++.| .+.+     .++||++||..+..              
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-----~~~iv~~ss~~~~~--------------  149 (262)
T PRK13394         89 VSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-----GGVVIYMGSVHSHE--------------  149 (262)
T ss_pred             EECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-----CcEEEEEcchhhcC--------------
Confidence            9999986432  245667889999999999999999999999 5433     57999999987654              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH---------HHHHHH-----HHhhh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV---------MRFLKF-----FSFFL  223 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~---------~~~~~~-----~~~~~  223 (288)
                       +.++...|+.+|+++..+++.++.++...+  |++|+|.||++.|++.......         ......     .+...
T Consensus       150 -~~~~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (262)
T PRK13394        150 -ASPLKSAYVTAKHGLLGLARVLAKEGAKHN--VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGV  226 (262)
T ss_pred             -CCCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCC
Confidence             245667899999999999999999998888  9999999999999875432100         011111     12345


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +.+++|+++.++++++ .....++|++|..+
T Consensus       227 ~~~~~dva~a~~~l~~-~~~~~~~g~~~~~~  256 (262)
T PRK13394        227 FTTVEDVAQTVLFLSS-FPSAALTGQSFVVS  256 (262)
T ss_pred             CCCHHHHHHHHHHHcC-ccccCCcCCEEeeC
Confidence            6799999999999997 55678899988743

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-32  Score=230.39  Aligned_cols=231  Identities=27%  Similarity=0.301  Sum_probs=191.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||++++++|+++|++|++++|+.+..++...++...  +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus         8 lItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   85 (258)
T PRK12429          8 LVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETFGGVDIL   85 (258)
T ss_pred             EEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999888877777653  4678999999999999999999999988899999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||.....  .+.+.++++..+++|+.+++.+++.+++.|.+..     .++||++||..+..+              
T Consensus        86 i~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~iss~~~~~~--------------  146 (258)
T PRK12429         86 VNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-----GGRIINMASVHGLVG--------------  146 (258)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-----CeEEEEEcchhhccC--------------
Confidence            9999976442  3556678899999999999999999999998765     579999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----------hHHHHHHH----HHHhhhc
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----------AVVMRFLK----FFSFFLW  224 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~----~~~~~~~  224 (288)
                       .++...|+++|+++..+++.++.++...+  |+|++++||++.|++....          ........    ..+...+
T Consensus       147 -~~~~~~y~~~k~a~~~~~~~l~~~~~~~~--i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (258)
T PRK12429        147 -SAGKAAYVSAKHGLIGLTKVVALEGATHG--VTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRF  223 (258)
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCcccc
Confidence             56778999999999999999999998888  9999999999999876421          00111111    1133456


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .+++|+|+.+++++. +....++|+++. ++|+
T Consensus       224 ~~~~d~a~~~~~l~~-~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        224 TTVEEIADYALFLAS-FAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             CCHHHHHHHHHHHcC-ccccCccCCeEEeCCCE
Confidence            789999999999996 566788999776 4443

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-32  Score=227.82  Aligned_cols=229  Identities=25%  Similarity=0.255  Sum_probs=186.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC----ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR----NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      +||||++|||+++|+.|+++|++|++++|    +.+..++..+++...  +.++.++.+|+++.++++++++++.+.+++
T Consensus        10 lItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (249)
T PRK12827         10 LITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAGVEEFGR   87 (249)
T ss_pred             EEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            69999999999999999999999999765    344444454554433  457899999999999999999999988889


Q ss_pred             cceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhH-HHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           77 LNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLL-DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        77 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      +|+||||||....  ..+.+.+++++.+++|+.+++.+++++. +.+.++.     .++||++||..+..+         
T Consensus        88 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~---------  153 (249)
T PRK12827         88 LDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-----GGRIVNIASVAGVRG---------  153 (249)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-----CeEEEEECCchhcCC---------
Confidence            9999999998753  2356677899999999999999999999 5555443     478999999887653         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHH
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                            .++...|+.+|++++.+++.++.++...+  |++++++||+++|++...........+..+.....+++++|+.
T Consensus       154 ------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  225 (249)
T PRK12827        154 ------NRGQVNYAASKAGLIGLTKTLANELAPRG--ITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAAL  225 (249)
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHH
Confidence                  45677899999999999999999999888  9999999999999987654322233333444455689999999


Q ss_pred             HHHHhcCCCccCCCceeeccC
Q 023054          234 TCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++++++ +....++|+++..+
T Consensus       226 ~~~l~~-~~~~~~~g~~~~~~  245 (249)
T PRK12827        226 VAFLVS-DAASYVTGQVIPVD  245 (249)
T ss_pred             HHHHcC-cccCCccCcEEEeC
Confidence            999996 66788999988733

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=4.8e-32  Score=227.96  Aligned_cols=221  Identities=20%  Similarity=0.269  Sum_probs=178.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||.++++.|+++|++|++++|+++.++.+.+.+     +.++.++.+|+++.++++.+++++.+.++++|+|
T Consensus         4 lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          4 LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999988777665544     3468899999999999999999998888899999


Q ss_pred             EEccccCC---CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+..   +..+.+.+++++++++|+.+++.+++.++|.|.+++     .++||++||..+..              
T Consensus        79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~--------------  139 (248)
T PRK10538         79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-----HGHIINIGSTAGSW--------------  139 (248)
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEECCcccCC--------------
Confidence            99999753   233567788999999999999999999999998754     57999999987654              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       +.++...|+.+|++++.+++.++.++...+  |+||+|.||++.|++.....   ...............+|+|+|+.+
T Consensus       140 -~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~  216 (248)
T PRK10538        140 -PYAGGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAV  216 (248)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHhcCCC--cEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHH
Confidence             255677899999999999999999999988  99999999999854432210   011111112223346899999999


Q ss_pred             HHHhcCCCccCCCce
Q 023054          235 CYVALHPNLKGVTGK  249 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~  249 (288)
                      +|+++.+ ..+.+++
T Consensus       217 ~~l~~~~-~~~~~~~  230 (248)
T PRK10538        217 WWVATLP-AHVNINT  230 (248)
T ss_pred             HHHhcCC-Ccccchh
Confidence            9999743 3333443

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.7e-32  Score=227.44  Aligned_cols=228  Identities=23%  Similarity=0.228  Sum_probs=186.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||.++++.|+++|++|++++|+.+++++..+++...  +.++.++.+|+++.++++++++.+.+.++++|+|
T Consensus         9 lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   86 (253)
T PRK08217          9 VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGL   86 (253)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888877777654  4678899999999999999999998888899999


Q ss_pred             EEccccCCCC-----------CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc
Q 023054           81 INNAGIMFCP-----------YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI  149 (288)
Q Consensus        81 v~~ag~~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  149 (288)
                      |||||.....           .+.+.+.++.++++|+.+++.+.+.++|.|.+...    .++|+++||... .      
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~----~~~iv~~ss~~~-~------  155 (253)
T PRK08217         87 INNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS----KGVIINISSIAR-A------  155 (253)
T ss_pred             EECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC----CeEEEEEccccc-c------
Confidence            9999975421           23455778889999999999999999999976531    468999988643 2      


Q ss_pred             cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCCh
Q 023054          150 RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNV  227 (288)
Q Consensus       150 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~  227 (288)
                               +.++...|+++|++++.++++++.++...+  |++++++||++.|++......  ........+.....+|
T Consensus       156 ---------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (253)
T PRK08217        156 ---------GNMGQTNYSASKAGVAAMTVTWAKELARYG--IRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEP  224 (253)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCH
Confidence                     245678899999999999999999998888  999999999999998764421  1122223344556799


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeeccCc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      +++|+.++++++ .  .+++|+.|..++
T Consensus       225 ~~~a~~~~~l~~-~--~~~~g~~~~~~g  249 (253)
T PRK08217        225 EEIAHTVRFIIE-N--DYVTGRVLEIDG  249 (253)
T ss_pred             HHHHHHHHHHHc-C--CCcCCcEEEeCC
Confidence            999999999995 2  578999887443

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.3e-32  Score=228.65  Aligned_cols=235  Identities=23%  Similarity=0.254  Sum_probs=188.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++++.|+++|++|++++|+. +..++..+.+...  +.++.++.+|+++.+++.++++.+.+.++++|+
T Consensus         6 lItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12745          6 LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC   83 (256)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999999864 3444455555433  457899999999999999999999999999999


Q ss_pred             EEEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC-CCCCeEEEEcCccccccccCCccccCC
Q 023054           80 LINNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET-GIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        80 lv~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      +|||||...+    ..+.+.+++++.+++|+.+++.+++++++.|.++.... ...++||++||..+..+          
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------  153 (256)
T PRK12745         84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV----------  153 (256)
T ss_pred             EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC----------
Confidence            9999998543    22456688999999999999999999999998754211 11357999999887653          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH-HHHHH--HHHhhhcCChHHHH
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV-MRFLK--FFSFFLWKNVPQGA  231 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~--~~~~~~~~~~~~~a  231 (288)
                           .++...|+.+|++++.+++.++.++...|  |+|++|+||++.|++....... .....  ..+...+.+|++++
T Consensus       154 -----~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a  226 (256)
T PRK12745        154 -----SPNRGEYCISKAGLSMAAQLFAARLAEEG--IGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVA  226 (256)
T ss_pred             -----CCCCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHH
Confidence                 45667899999999999999999999888  9999999999999886543111 11111  12344566899999


Q ss_pred             HHHHHHhcCCCccCCCceeeccCc
Q 023054          232 ATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      +.+.++++ +...+++|..+..++
T Consensus       227 ~~i~~l~~-~~~~~~~G~~~~i~g  249 (256)
T PRK12745        227 RAVAALAS-GDLPYSTGQAIHVDG  249 (256)
T ss_pred             HHHHHHhC-CcccccCCCEEEECC
Confidence            99999996 667789999887444

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-32  Score=231.59  Aligned_cols=213  Identities=23%  Similarity=0.216  Sum_probs=175.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+||||++++++|+++|++|++++|+.+.++.+...    . +.++.++.+|++|.+++.++++.+.+.++++|+|
T Consensus         8 lVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          8 LITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             EEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6999999999999999999999999999998776554332    1 3568899999999999999999999888999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++++++|+.+++.++++++|+|++..     .++||++||..+..+              
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~iSS~~~~~~--------------  143 (277)
T PRK06180         83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-----RGHIVNITSMGGLIT--------------  143 (277)
T ss_pred             EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-----CCEEEEEecccccCC--------------
Confidence            999998643  23556678999999999999999999999998754     579999999887753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hHHHHHH-------HHHHhhh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AVVMRFL-------KFFSFFL  223 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~-------~~~~~~~  223 (288)
                       .++...|+++|++++.++++++.++...|  ++|++|.||++.|++....        .......       ...+...
T Consensus       144 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (277)
T PRK06180        144 -MPGIGYYCGSKFALEGISESLAKEVAPFG--IHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQ  220 (277)
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCC
Confidence             56778999999999999999999999888  9999999999999874321        1001100       1112234


Q ss_pred             cCChHHHHHHHHHHhcC
Q 023054          224 WKNVPQGAATTCYVALH  240 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~  240 (288)
                      ..+|+++|+.+++++..
T Consensus       221 ~~~~~dva~~~~~~l~~  237 (277)
T PRK06180        221 PGDPAKAAQAILAAVES  237 (277)
T ss_pred             CCCHHHHHHHHHHHHcC
Confidence            56899999999999963

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-32  Score=232.68  Aligned_cols=211  Identities=23%  Similarity=0.252  Sum_probs=172.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-CCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-LPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~   79 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.++++.+        ..+.++.+|++|.++++.+++++.+.+ +++|+
T Consensus         8 lItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          8 LITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA--------EGLEAFQLDYAEPESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------CCceEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence            689999999999999999999999999999877654332        247788999999999999999987655 68999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++++.++++|+.+++.+++.++|.|.+.+     .++||++||..+..+             
T Consensus        80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-----~g~iv~isS~~~~~~-------------  141 (277)
T PRK05993         80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-----QGRIVQCSSILGLVP-------------  141 (277)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-----CCEEEEECChhhcCC-------------
Confidence            9999998654  23566788999999999999999999999998765     589999999887653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH----------------HHHHHHH--
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV----------------MRFLKFF--  219 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~----------------~~~~~~~--  219 (288)
                        .++...|++||+++++|+++++.++...|  |+|++|+||+++|++..+....                .......  
T Consensus       142 --~~~~~~Y~asK~a~~~~~~~l~~el~~~g--i~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (277)
T PRK05993        142 --MKYRGAYNASKFAIEGLSLTLRMELQGSG--IHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEG  217 (277)
T ss_pred             --CCccchHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHh
Confidence              55678999999999999999999999999  9999999999999987643110                0000000  


Q ss_pred             ---HhhhcCChHHHHHHHHHHhcCC
Q 023054          220 ---SFFLWKNVPQGAATTCYVALHP  241 (288)
Q Consensus       220 ---~~~~~~~~~~~a~~~~~l~~~~  241 (288)
                         ......+|+++|+.++..+.++
T Consensus       218 ~~~~~~~~~~~~~va~~i~~a~~~~  242 (277)
T PRK05993        218 GGSKSRFKLGPEAVYAVLLHALTAP  242 (277)
T ss_pred             hhhccccCCCHHHHHHHHHHHHcCC
Confidence               1122458999999999999643

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-32  Score=228.10  Aligned_cols=228  Identities=23%  Similarity=0.288  Sum_probs=187.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..+.+.+.+.    +.++.++.+|++|.+++..+++++.+.++++|++
T Consensus         6 lItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          6 LVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             EEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999888777766552    3568899999999999999999998888899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|....  ..+.+.++|...+.+|+.+++.+++++++.+.++.     .++||++||..+..               
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~---------------  141 (257)
T PRK07074         82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-----RGAVVNIGSVNGMA---------------  141 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CeEEEEEcchhhcC---------------
Confidence            999998654  23456678899999999999999999999997754     57999999976542               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-----hHHHHHHHHHHhhhcCChHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-----AVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                       ..+...|+.+|++++.++++++.++++.|  |+|++++||++.|++....     ..........+...+..++|+++.
T Consensus       142 -~~~~~~y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  218 (257)
T PRK07074        142 -ALGHPAYSAAKAGLIHYTKLLAVEYGRFG--IRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANA  218 (257)
T ss_pred             -CCCCcccHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence             12346899999999999999999999998  9999999999999975432     111111122334566899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +++|++ +...+++|+++. ++|.
T Consensus       219 ~~~l~~-~~~~~~~g~~~~~~~g~  241 (257)
T PRK07074        219 VLFLAS-PAARAITGVCLPVDGGL  241 (257)
T ss_pred             HHHHcC-chhcCcCCcEEEeCCCc
Confidence            999996 667889999886 5543

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-32  Score=229.06  Aligned_cols=228  Identities=18%  Similarity=0.172  Sum_probs=179.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC---
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP---   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~---   76 (288)
                      |||||++|||++++++|+++|++|++++|++ +.+++..+    .. +.+++++.+|+++.++++++++++.+.++.   
T Consensus         5 lItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          5 IITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE----QY-NSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             EEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh----cc-CCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            6999999999999999999999999999987 33333222    11 456889999999999999999998776542   


Q ss_pred             -cceEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           77 -LNILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        77 -id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                       .+++|+|||...+   ..+.+.+++.+.+++|+.+++.+++.++|+|.+...    .++||++||..+..         
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~iv~~sS~~~~~---------  146 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKV----DKRVINISSGAAKN---------  146 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCC----CceEEEecchhhcC---------
Confidence             2289999998643   336677899999999999999999999999976321    46899999987654         


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hHHHHHHHHHHhhhc
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AVVMRFLKFFSFFLW  224 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~  224 (288)
                            ++++...|+++|++++.+++.++.+++....+|+|++|.||++.|++....        .....+....+..++
T Consensus       147 ------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (251)
T PRK06924        147 ------PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKL  220 (251)
T ss_pred             ------CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCc
Confidence                  366778999999999999999999987543349999999999999975421        011123333455567


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      .+|+++|+.++++++ + ..+++|+++..+
T Consensus       221 ~~~~dva~~~~~l~~-~-~~~~~G~~~~v~  248 (251)
T PRK06924        221 LSPEYVAKALRNLLE-T-EDFPNGEVIDID  248 (251)
T ss_pred             CCHHHHHHHHHHHHh-c-ccCCCCCEeehh
Confidence            899999999999997 3 378999987643

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-32  Score=230.62  Aligned_cols=206  Identities=19%  Similarity=0.174  Sum_probs=171.6

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHH-HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAA-ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||+++|++|+++| ++|++++|+.+. ++++.+++...+ ..+++++.+|++|.+++.++++++.+ .+++|
T Consensus        12 lItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-~g~id   89 (253)
T PRK07904         12 LLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-GGDVD   89 (253)
T ss_pred             EEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-cCCCC
Confidence            699999999999999999995 899999999876 777777776542 34789999999999999999998886 47999


Q ss_pred             eEEEccccCCCCCC--CCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           79 ILINNAGIMFCPYQ--ISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        79 ~lv~~ag~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ++|||+|...+...  .+.+...+.+++|+.+++.+++.++|.|.+++     .++||++||..+..+            
T Consensus        90 ~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-----~~~iv~isS~~g~~~------------  152 (253)
T PRK07904         90 VAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-----FGQIIAMSSVAGERV------------  152 (253)
T ss_pred             EEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-----CceEEEEechhhcCC------------
Confidence            99999998654221  12233446899999999999999999998765     589999999986542            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                         .++...|++||+++.+|+++++.++..++  |+|++|+||++.|++......         .....+|+++|+.++.
T Consensus       153 ---~~~~~~Y~~sKaa~~~~~~~l~~el~~~~--i~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~~A~~i~~  218 (253)
T PRK07904        153 ---RRSNFVYGSTKAGLDGFYLGLGEALREYG--VRVLVVRPGQVRTRMSAHAKE---------APLTVDKEDVAKLAVT  218 (253)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeeCceecchhccCCC---------CCCCCCHHHHHHHHHH
Confidence               34557899999999999999999999998  999999999999998765321         1224689999999999


Q ss_pred             Hhc
Q 023054          237 VAL  239 (288)
Q Consensus       237 l~~  239 (288)
                      .+.
T Consensus       219 ~~~  221 (253)
T PRK07904        219 AVA  221 (253)
T ss_pred             HHH
Confidence            996

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.6e-32  Score=226.28  Aligned_cols=222  Identities=20%  Similarity=0.171  Sum_probs=186.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCC--ChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS--SIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+++||.+++++|+++|++|++++|+.+..++..+++.... ..++.++.+|++  +.+++.++++.+.+.++++|
T Consensus        16 lItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id   94 (247)
T PRK08945         16 LVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLD   94 (247)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999988887777776543 346777888886  78999999999999889999


Q ss_pred             eEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||....   ..+.+.+++++.+++|+.+++.+++.++|+|.+++     .++||++||..+..+           
T Consensus        95 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-----~~~iv~~ss~~~~~~-----------  158 (247)
T PRK08945         95 GVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-----AASLVFTSSSVGRQG-----------  158 (247)
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-----CCEEEEEccHhhcCC-----------
Confidence            99999997543   23556788999999999999999999999998765     579999999887653           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                          .+....|++||++++.+++.++.++...+  |++++++||+++|++.......      .....+.+|+++++.++
T Consensus       159 ----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~~~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~  226 (247)
T PRK08945        159 ----RANWGAYAVSKFATEGMMQVLADEYQGTN--LRVNCINPGGTRTAMRASAFPG------EDPQKLKTPEDIMPLYL  226 (247)
T ss_pred             ----CCCCcccHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCCccCcchhhhcCc------ccccCCCCHHHHHHHHH
Confidence                45667899999999999999999999888  9999999999999874322000      11234579999999999


Q ss_pred             HHhcCCCccCCCceeec
Q 023054          236 YVALHPNLKGVTGKYFL  252 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~  252 (288)
                      |+++ +...+++|+++.
T Consensus       227 ~~~~-~~~~~~~g~~~~  242 (247)
T PRK08945        227 YLMG-DDSRRKNGQSFD  242 (247)
T ss_pred             HHhC-ccccccCCeEEe
Confidence            9996 778899999874

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=227.48  Aligned_cols=213  Identities=21%  Similarity=0.163  Sum_probs=177.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc-CCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL-NLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++++...+.    +.+++++++|+++.+++.++++.+.+. ++++|+
T Consensus         5 lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          5 FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            699999999999999999999999999999988777666543    357899999999999999999988776 789999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||....  ..+.+.++++.++++|+.+++.+++++.++|...+     .++||++||..+..+             
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~-------------  142 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-----GARVINTSSASAIYG-------------  142 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CCEEEEeCchhhCcC-------------
Confidence            9999998654  23556788999999999999999999999998764     589999999887653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                        .+....|+.||++++.++++++.++...+  |++++|.||++.|++....................+|+++|+.++++
T Consensus       143 --~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~  218 (260)
T PRK08267        143 --QPGLAVYSATKFAVRGLTEALDLEWRRHG--IRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAA  218 (260)
T ss_pred             --CCCchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHH
Confidence              45667899999999999999999999988  99999999999999876410001111111223346899999999999


Q ss_pred             hc
Q 023054          238 AL  239 (288)
Q Consensus       238 ~~  239 (288)
                      +.
T Consensus       219 ~~  220 (260)
T PRK08267        219 VQ  220 (260)
T ss_pred             Hh
Confidence            95

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=2.9e-32  Score=227.48  Aligned_cols=219  Identities=19%  Similarity=0.188  Sum_probs=171.4

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      +||||++|||+++|++|+++|  ..|++..|+....          ....++.++++|+++.++++++.+    .++++|
T Consensus         4 lItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~~----~~~~id   69 (235)
T PRK09009          4 LIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLSE----QFTQLD   69 (235)
T ss_pred             EEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHHH----hcCCCC
Confidence            699999999999999999985  5676667654321          113578899999999999887543    457899


Q ss_pred             eEEEccccCCCC--------CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcc
Q 023054           79 ILINNAGIMFCP--------YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIR  150 (288)
Q Consensus        79 ~lv~~ag~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  150 (288)
                      +||||||.....        .+.+.+.+++.+++|+.+++.+++.++|.|.+++     .++|+++||..+...      
T Consensus        70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-----~~~i~~iss~~~~~~------  138 (235)
T PRK09009         70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-----SAKFAVISAKVGSIS------  138 (235)
T ss_pred             EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-----CceEEEEeecccccc------
Confidence            999999987431        2445577889999999999999999999997654     578999998765431      


Q ss_pred             ccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHH
Q 023054          151 FQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       151 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
                            ....+++..|+++|+++..|+++|+.++.....+|+||+|+||+++|++.....      ...+...+.+|+++
T Consensus       139 ------~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~  206 (235)
T PRK09009        139 ------DNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ------QNVPKGKLFTPEYV  206 (235)
T ss_pred             ------cCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh------hccccCCCCCHHHH
Confidence                  001345678999999999999999999987433499999999999999976431      12334446799999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+.++++++ +...+++|+++. ++++.
T Consensus       207 a~~~~~l~~-~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        207 AQCLLGIIA-NATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHHHHHHHH-cCChhhCCcEEeeCCcCC
Confidence            999999997 667788999886 55554

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2e-31  Score=228.95  Aligned_cols=222  Identities=20%  Similarity=0.158  Sum_probs=179.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++.+.+.++++|+|
T Consensus        10 lVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~v   87 (287)
T PRK06194         10 VITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERFGAVHLL   87 (287)
T ss_pred             EEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988888777777554  4578899999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhcc-CCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKE-TGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||.....  .+.+.++++..+++|+.+++.++++++|.|.++... ....++||++||..+..+             
T Consensus        88 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------  154 (287)
T PRK06194         88 FNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA-------------  154 (287)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC-------------
Confidence            9999987542  255678899999999999999999999999876421 011279999999987753             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-------------HH----HHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-------------VM----RFLKFFS  220 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-------------~~----~~~~~~~  220 (288)
                        .++...|+++|++++.++++++.+++..+..|++++++||++.|++......             ..    .......
T Consensus       155 --~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (287)
T PRK06194        155 --PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAV  232 (287)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhh
Confidence              4566789999999999999999999866555999999999999998653210             00    0011111


Q ss_pred             hhhcCChHHHHHHHHHHhc
Q 023054          221 FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       221 ~~~~~~~~~~a~~~~~l~~  239 (288)
                      .....+++|+|+.++.++.
T Consensus       233 ~~~~~s~~dva~~i~~~~~  251 (287)
T PRK06194        233 GSGKVTAEEVAQLVFDAIR  251 (287)
T ss_pred             hccCCCHHHHHHHHHHHHH
Confidence            1123699999999999884

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-31  Score=224.10  Aligned_cols=229  Identities=26%  Similarity=0.285  Sum_probs=191.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+++||.++++.|+++|++|+++ +|+.+..+...+.+...  +.++.++.+|+++++++.++++.+.+.++++|+
T Consensus         9 lI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (247)
T PRK05565          9 IVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEKFGKIDI   86 (247)
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999999999 99988877777766553  456899999999999999999999988889999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||+|....  ..+.+.+++++.+++|+.+++.+++.+++.+.+.+     .+++|++||..+..+             
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~v~~sS~~~~~~-------------  148 (247)
T PRK05565         87 LVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-----SGVIVNISSIWGLIG-------------  148 (247)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEECCHhhccC-------------
Confidence            9999998743  22566788999999999999999999999998754     578999999887653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH--HHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM--RFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .+....|+.+|+++..+++.++.++...|  |++++++||+++|++........  .+....+.....+++++++.++
T Consensus       149 --~~~~~~y~~sK~a~~~~~~~~~~~~~~~g--i~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  224 (247)
T PRK05565        149 --ASCEVLYSASKGAVNAFTKALAKELAPSG--IRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVL  224 (247)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence              45667899999999999999999998888  99999999999999876543211  1111223344568999999999


Q ss_pred             HHhcCCCccCCCceeeccC
Q 023054          236 YVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++++ +....++|+++..+
T Consensus       225 ~l~~-~~~~~~~g~~~~~~  242 (247)
T PRK05565        225 FLAS-DDASYITGQIITVD  242 (247)
T ss_pred             HHcC-CccCCccCcEEEec
Confidence            9997 67788999988744

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=225.01  Aligned_cols=227  Identities=27%  Similarity=0.299  Sum_probs=183.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-----
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-----   74 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-----   74 (288)
                      +||||++|||+++|++|+++|++|++. .|+.+.+++..+.+...  +.++.++.+|++|.+++.++++++.+.+     
T Consensus        10 lItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~   87 (254)
T PRK12746         10 LVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKNELQIRVG   87 (254)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHHHhccccC
Confidence            699999999999999999999998774 78887777766666443  3568899999999999999999988765     


Q ss_pred             -CCcceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           75 -LPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        75 -~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                       +++|++|||||.....  .+.+.+.++..+++|+.+++++++.+++.|.+       .+++|++||..+..+       
T Consensus        88 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~v~~sS~~~~~~-------  153 (254)
T PRK12746         88 TSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-------EGRVINISSAEVRLG-------  153 (254)
T ss_pred             CCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECCHHhcCC-------
Confidence             4799999999976442  24566788999999999999999999999865       469999999877642       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHH----HHHHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFL----KFFSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~----~~~~~~~~~~~  227 (288)
                              .++...|+++|++++.++++++.++...+  ++|++++||++.|++...........    .........++
T Consensus       154 --------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (254)
T PRK12746        154 --------FTGSIAYGLSKGALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQV  223 (254)
T ss_pred             --------CCCCcchHhhHHHHHHHHHHHHHHHhhcC--cEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCH
Confidence                    55677899999999999999999999888  99999999999999865331111111    11123445689


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +|+|+.+.++++ +...+++|+.+..+
T Consensus       224 ~dva~~~~~l~~-~~~~~~~g~~~~i~  249 (254)
T PRK12746        224 EDIADAVAFLAS-SDSRWVTGQIIDVS  249 (254)
T ss_pred             HHHHHHHHHHcC-cccCCcCCCEEEeC
Confidence            999999999996 56678899877643

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=2.3e-31  Score=223.43  Aligned_cols=233  Identities=27%  Similarity=0.312  Sum_probs=186.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++ ..|+.+..++...++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         5 lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~   82 (247)
T PRK09730          5 LVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEPLAA   82 (247)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCE
Confidence            69999999999999999999999877 467777777766666543  456888999999999999999999988999999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ||||+|....   ..+.+.++++..+++|+.+++.+++.+++.+.+...  +.+++||++||..+..+            
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~g~~v~~sS~~~~~~------------  148 (247)
T PRK09730         83 LVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHG--GSGGAIVNVSSAASRLG------------  148 (247)
T ss_pred             EEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CCCcEEEEECchhhccC------------
Confidence            9999997533   234566788999999999999999999999976421  11478999999887653            


Q ss_pred             CCCCCc-cccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---HHHHHHHHHhhhcCChHHHHH
Q 023054          157 RAGYSD-KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---VMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       157 ~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~  232 (288)
                         .++ ...|+++|++++.+++.++.++...+  |++++++||++.|++......   ........+.....+|+|+|+
T Consensus       149 ---~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  223 (247)
T PRK09730        149 ---APGEYVDYAASKGAIDTLTTGLSLEVAAQG--IRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQ  223 (247)
T ss_pred             ---CCCcccchHhHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence               222 35799999999999999999999888  999999999999997543211   111222223334568999999


Q ss_pred             HHHHHhcCCCccCCCceeeccCc
Q 023054          233 TTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      .++++++ +...+++|+++..++
T Consensus       224 ~~~~~~~-~~~~~~~g~~~~~~g  245 (247)
T PRK09730        224 AIVWLLS-DKASYVTGSFIDLAG  245 (247)
T ss_pred             HHHhhcC-hhhcCccCcEEecCC
Confidence            9999997 566789999887544

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.2e-31  Score=253.41  Aligned_cols=234  Identities=24%  Similarity=0.277  Sum_probs=191.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++...+.+.......++.++.+|++|.++++++++++.+.++++|+|
T Consensus       418 LVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDil  497 (676)
T TIGR02632       418 FVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIV  497 (676)
T ss_pred             EEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            69999999999999999999999999999998888777777654434568889999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|+..+++|+.+++.+++.+++.|.++..    +++||++||..+..+              
T Consensus       498 V~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~----~g~IV~iSS~~a~~~--------------  559 (676)
T TIGR02632       498 VNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL----GGNIVFIASKNAVYA--------------  559 (676)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCEEEEEeChhhcCC--------------
Confidence            999998643  235567889999999999999999999999976421    479999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccC--CCCCCC-----------hH---HHHHHHHHHhh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT--NLFKHS-----------AV---VMRFLKFFSFF  222 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t--~~~~~~-----------~~---~~~~~~~~~~~  222 (288)
                       .++..+|++||++++.++++++.+++..|  |+||+|+||.+.|  .+....           ..   ........+..
T Consensus       560 -~~~~~aY~aSKaA~~~l~r~lA~el~~~g--IrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~  636 (676)
T TIGR02632       560 -GKNASAYSAAKAAEAHLARCLAAEGGTYG--IRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLK  636 (676)
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcC
Confidence             45678999999999999999999999999  9999999999964  332211           00   00111222344


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ...+|+|+|+.++|+++ +...++||+++. |+|.
T Consensus       637 r~v~peDVA~av~~L~s-~~~~~~TG~~i~vDGG~  670 (676)
T TIGR02632       637 RHIFPADIAEAVFFLAS-SKSEKTTGCIITVDGGV  670 (676)
T ss_pred             CCcCHHHHHHHHHHHhC-CcccCCcCcEEEECCCc
Confidence            55789999999999996 667899999887 4443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.5e-32  Score=245.10  Aligned_cols=226  Identities=27%  Similarity=0.293  Sum_probs=183.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh--HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM--AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||++++++|+++|++|+++++..  +.+++...++       ...++.+|+++.++++.+++.+.+.++++|
T Consensus       214 lItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        214 LVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-------GGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             EEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-------CCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            6999999999999999999999999998843  3333332221       235788999999999999999999889999


Q ss_pred             eEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           79 ILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        79 ~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +||||||+....  .+.+.+.|+..+++|+.+++.+++.+++.+..+.     .++||++||..+..+            
T Consensus       287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~g~iv~~SS~~~~~g------------  349 (450)
T PRK08261        287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-----GGRIVGVSSISGIAG------------  349 (450)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-----CCEEEEECChhhcCC------------
Confidence            999999987542  3567788999999999999999999999654433     589999999987653            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH-HHHHH-HHhhhcCChHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM-RFLKF-FSFFLWKNVPQGAATT  234 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~-~~~~~-~~~~~~~~~~~~a~~~  234 (288)
                         .++...|+++|+++++|+++++.++...+  |++|+|+||+++|++....+... ...+. .+......|+|+|+.+
T Consensus       350 ---~~~~~~Y~asKaal~~~~~~la~el~~~g--i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~  424 (450)
T PRK08261        350 ---NRGQTNYAASKAGVIGLVQALAPLLAERG--ITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETI  424 (450)
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHH
Confidence               55678999999999999999999999998  99999999999999876543211 11111 2233446899999999


Q ss_pred             HHHhcCCCccCCCceeeccCcc
Q 023054          235 CYVALHPNLKGVTGKYFLDCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~~~~  256 (288)
                      +||++ +...++||+.+..+|.
T Consensus       425 ~~l~s-~~~~~itG~~i~v~g~  445 (450)
T PRK08261        425 AWLAS-PASGGVTGNVVRVCGQ  445 (450)
T ss_pred             HHHhC-hhhcCCCCCEEEECCC
Confidence            99997 7889999999876554

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-31  Score=223.54  Aligned_cols=208  Identities=18%  Similarity=0.199  Sum_probs=179.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.++.+++...+....++.+++++.+|+++.+++.++++++.+.++++|++
T Consensus         6 lItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   85 (248)
T PRK08251          6 LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRV   85 (248)
T ss_pred             EEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999888888877766667789999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  ...+.+.+++.+++|+.+++.+++.++|.|.+.+     .++||++||..+..+              
T Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~--------------  146 (248)
T PRK08251         86 IVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-----SGHLVLISSVSAVRG--------------  146 (248)
T ss_pred             EECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCeEEEEeccccccC--------------
Confidence            9999986542  2345567788999999999999999999998754     579999999887653              


Q ss_pred             CCC-ccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          159 GYS-DKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       159 ~~~-~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                       .+ ....|+.||++++.+++.++.++...+  |+|++|+||+++|++......         .....+++++|+.++..
T Consensus       147 -~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~a~~i~~~  214 (248)
T PRK08251        147 -LPGVKAAYAASKAGVASLGEGLRAELAKTP--IKVSTIEPGYIRSEMNAKAKS---------TPFMVDTETGVKALVKA  214 (248)
T ss_pred             -CCCCcccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcCcchhhhcccc---------CCccCCHHHHHHHHHHH
Confidence             33 357899999999999999999999877  999999999999998765421         12346899999999999


Q ss_pred             hc
Q 023054          238 AL  239 (288)
Q Consensus       238 ~~  239 (288)
                      +.
T Consensus       215 ~~  216 (248)
T PRK08251        215 IE  216 (248)
T ss_pred             Hh
Confidence            96

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-31  Score=222.48  Aligned_cols=220  Identities=20%  Similarity=0.176  Sum_probs=183.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++++++.++++++.+.++++|+|
T Consensus        11 lVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   88 (239)
T PRK07666         11 LITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNELGSIDIL   88 (239)
T ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEE
Confidence            68999999999999999999999999999998888777777543  4578999999999999999999999989999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|....  ..+.+.+++++.+++|+.+++.+++++.|.+.++.     .+++|++||..+..+              
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~ss~~~~~~--------------  149 (239)
T PRK07666         89 INNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-----SGDIINISSTAGQKG--------------  149 (239)
T ss_pred             EEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CcEEEEEcchhhccC--------------
Confidence            999998643  22556688999999999999999999999997754     579999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|+.+|+++..+++.++.++.+.|  |++++|.||++.|++.......    .. ....+.+++++|+.++.++
T Consensus       150 -~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~----~~-~~~~~~~~~~~a~~~~~~l  221 (239)
T PRK07666        150 -AAVTSAYSASKFGVLGLTESLMQEVRKHN--IRVTALTPSTVATDMAVDLGLT----DG-NPDKVMQPEDLAEFIVAQL  221 (239)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccCcchhhcccc----cc-CCCCCCCHHHHHHHHHHHH
Confidence             45667899999999999999999999888  9999999999999976533111    00 1123468999999999999


Q ss_pred             cCCCccCCCce
Q 023054          239 LHPNLKGVTGK  249 (288)
Q Consensus       239 ~~~~~~~~tG~  249 (288)
                      +.+...++++.
T Consensus       222 ~~~~~~~~~~~  232 (239)
T PRK07666        222 KLNKRTFIKSA  232 (239)
T ss_pred             hCCCceEEEEE
Confidence            85544444443

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=5.9e-31  Score=221.41  Aligned_cols=228  Identities=26%  Similarity=0.282  Sum_probs=190.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||++++++|+++|++|++++|+.++..+..+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        10 lItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   87 (251)
T PRK12826         10 LVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDFGRLDIL   87 (251)
T ss_pred             EEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999988877777777654  3468899999999999999999999988999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc-ccccCCccccCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ-YTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~~~~~~  157 (288)
                      |||+|.....  ...+.+++++.+.+|+.+++.+++.++|.|.+.+     .++||++||..+. .              
T Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~ii~~ss~~~~~~--------------  148 (251)
T PRK12826         88 VANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-----GGRIVLTSSVAGPRV--------------  148 (251)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEEechHhhcc--------------
Confidence            9999886542  2456778899999999999999999999997754     5799999998765 3              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---HHHHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---VMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       +.++...|+.+|++++.+++.++.++...+  ++++.+.||.+.|+.......   ........+...+.+++|+|+.+
T Consensus       149 -~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  225 (251)
T PRK12826        149 -GYPGLAHYAASKAGLVGFTRALALELAARN--ITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAV  225 (251)
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             245667899999999999999999999888  999999999999987654321   11122223444567899999999


Q ss_pred             HHHhcCCCccCCCceeecc
Q 023054          235 CYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~  253 (288)
                      ++++. +...+++|+.|.-
T Consensus       226 ~~l~~-~~~~~~~g~~~~~  243 (251)
T PRK12826        226 LFLAS-DEARYITGQTLPV  243 (251)
T ss_pred             HHHhC-ccccCcCCcEEEE
Confidence            99986 5667889998773

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-31  Score=224.21  Aligned_cols=218  Identities=24%  Similarity=0.270  Sum_probs=179.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+||||+++++.|+++|++|++++|+.+..++..+++.....+.++.++.+|++|.++++. ++++.+.++++|++
T Consensus         7 lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~v   85 (280)
T PRK06914          7 IVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLL   85 (280)
T ss_pred             EEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEE
Confidence            69999999999999999999999999999998887777666554334678999999999999999 88888888999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||...+.  .+.+.+++++.+++|+.+++.+++.++|.|.+..     .++||++||..+..               
T Consensus        86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~vsS~~~~~---------------  145 (280)
T PRK06914         86 VNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-----SGKIINISSISGRV---------------  145 (280)
T ss_pred             EECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEECcccccC---------------
Confidence            9999986542  2456678899999999999999999999997754     57999999987765               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----------HH----HHHHHH--HHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----------VV----MRFLKF--FSF  221 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----------~~----~~~~~~--~~~  221 (288)
                      +.++...|+++|++++.|+++++.++.++|  |+|++++||+++|++.....           ..    ......  .+.
T Consensus       146 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (280)
T PRK06914        146 GFPGLSPYVSSKYALEGFSESLRLELKPFG--IDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGS  223 (280)
T ss_pred             CCCCCchhHHhHHHHHHHHHHHHHHhhhhC--CEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhh
Confidence            356678899999999999999999999988  99999999999999754210           00    111111  123


Q ss_pred             hhcCChHHHHHHHHHHhcCC
Q 023054          222 FLWKNVPQGAATTCYVALHP  241 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~  241 (288)
                      ..+.+|+|+|+.++++++++
T Consensus       224 ~~~~~~~dva~~~~~~~~~~  243 (280)
T PRK06914        224 DTFGNPIDVANLIVEIAESK  243 (280)
T ss_pred             hccCCHHHHHHHHHHHHcCC
Confidence            44579999999999999743

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.4e-31  Score=220.26  Aligned_cols=217  Identities=22%  Similarity=0.225  Sum_probs=173.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..+.....+..   +.+++++.+|++|.++++++++++    +++|+|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAEA----GPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHhc----CCCCEE
Confidence            7999999999999999999999999999998877776666542   456889999999999999988753    689999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|....  ..+.+.+++++++++|+.+++.+++  .+.+.+       .++||++||..+..+              
T Consensus        74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~-------~g~iv~~ss~~~~~~--------------  130 (230)
T PRK07041         74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP-------GGSLTFVSGFAAVRP--------------  130 (230)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC-------CeEEEEECchhhcCC--------------
Confidence            999998654  2355678899999999999999999  444432       579999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh------HHHHHHHHHHhhhcCChHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA------VVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                       .++...|+.+|+++++++++++.++..    |+||+++||++.|++.....      .........+..+..+|+|+|+
T Consensus       131 -~~~~~~Y~~sK~a~~~~~~~la~e~~~----irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  205 (230)
T PRK07041        131 -SASGVLQGAINAALEALARGLALELAP----VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVAN  205 (230)
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHHHhhC----ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence             556788999999999999999999874    99999999999998864321      0111112223344568999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCc
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      .++++++ +  .+++|+.+. ++|
T Consensus       206 ~~~~l~~-~--~~~~G~~~~v~gg  226 (230)
T PRK07041        206 AILFLAA-N--GFTTGSTVLVDGG  226 (230)
T ss_pred             HHHHHhc-C--CCcCCcEEEeCCC
Confidence            9999996 2  578898766 444

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.8e-31  Score=224.12  Aligned_cols=208  Identities=28%  Similarity=0.275  Sum_probs=172.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||+||||++++++|+++|++|++++|+.+..+.          ..+++++.+|++|.++++++++.+.+.++++|+|
T Consensus         8 lVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l   77 (270)
T PRK06179          8 LVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAGRIDVL   77 (270)
T ss_pred             EEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence            699999999999999999999999999998765421          2357899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++++..+++|+.+++.+++.++|+|.+++     .++||++||..+..+              
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~--------------  138 (270)
T PRK06179         78 VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-----SGRIINISSVLGFLP--------------  138 (270)
T ss_pred             EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CceEEEECCccccCC--------------
Confidence            999998654  23556788999999999999999999999998765     689999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-------HHHH----HHHH--HhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-------VMRF----LKFF--SFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-------~~~~----~~~~--~~~~~~  225 (288)
                       .+....|+++|++++.+++.++.+++..|  |+|++|+||++.|++......       ....    ....  ......
T Consensus       139 -~~~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (270)
T PRK06179        139 -APYMALYAASKHAVEGYSESLDHEVRQFG--IRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKAD  215 (270)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCC
Confidence             45667899999999999999999999988  999999999999998654310       0000    0011  122346


Q ss_pred             ChHHHHHHHHHHhcC
Q 023054          226 NVPQGAATTCYVALH  240 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~  240 (288)
                      +|+++|+.+++++..
T Consensus       216 ~~~~va~~~~~~~~~  230 (270)
T PRK06179        216 APEVVADTVVKAALG  230 (270)
T ss_pred             CHHHHHHHHHHHHcC
Confidence            899999999999973

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.9e-30  Score=220.31  Aligned_cols=217  Identities=23%  Similarity=0.274  Sum_probs=177.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+.+.+++....+...  +.++.++.+|+++.+++.++++++.+.++++|+|
T Consensus        14 lVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   91 (274)
T PRK07775         14 LVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVL   91 (274)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999988777766666544  3568889999999999999999998888899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+.+++.+++|+.+++.+++.++|.|.++.     .++||++||..+..+              
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-----~g~iv~isS~~~~~~--------------  152 (274)
T PRK07775         92 VSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-----RGDLIFVGSDVALRQ--------------  152 (274)
T ss_pred             EECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CceEEEECChHhcCC--------------
Confidence            999998653  23456678899999999999999999999997654     579999999876642              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHH------HhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFF------SFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~------~~~~~~~~~~~  230 (288)
                       .+....|+.+|++++.+++.++.++...|  |++++|+||+++|++......  ........      ....+..++|+
T Consensus       153 -~~~~~~Y~~sK~a~~~l~~~~~~~~~~~g--i~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  229 (274)
T PRK07775        153 -RPHMGAYGAAKAGLEAMVTNLQMELEGTG--VRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDL  229 (274)
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHH
Confidence             44567899999999999999999998888  999999999999986433211  11111111      12345689999


Q ss_pred             HHHHHHHhcCC
Q 023054          231 AATTCYVALHP  241 (288)
Q Consensus       231 a~~~~~l~~~~  241 (288)
                      |+.++++++++
T Consensus       230 a~a~~~~~~~~  240 (274)
T PRK07775        230 ARAITFVAETP  240 (274)
T ss_pred             HHHHHHHhcCC
Confidence            99999999743

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.4e-31  Score=219.55  Aligned_cols=216  Identities=25%  Similarity=0.298  Sum_probs=176.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.          ..   ...++.+|++|.++++++++++.+.+ ++|+|
T Consensus         7 lItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~----------~~---~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~v   72 (234)
T PRK07577          7 LVTGATKGIGLALSLRLANLGHQVIGIARSAID----------DF---PGELFACDLADIEQTAATLAQINEIH-PVDAI   72 (234)
T ss_pred             EEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc----------cc---CceEEEeeCCCHHHHHHHHHHHHHhC-CCcEE
Confidence            689999999999999999999999999998653          00   12478899999999999999988876 69999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|.....  .+.+.+++++.+++|+.+++.+.+.++|.|++++     .++||++||....                
T Consensus        73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~----------------  131 (234)
T PRK07577         73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-----QGRIVNICSRAIF----------------  131 (234)
T ss_pred             EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEcccccc----------------
Confidence            9999986542  2456788999999999999999999999998764     5799999998532                


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-----HHHHHHHHHhhhcCChHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-----VMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                      +.+....|+++|+++++++++++.++++.|  |+|++|+||++.|++......     ........+.....+|+++|+.
T Consensus       132 ~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  209 (234)
T PRK07577        132 GALDRTSYSAAKSALVGCTRTWALELAEYG--ITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAA  209 (234)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHH
Confidence            134567899999999999999999999988  999999999999998653211     1112222333445689999999


Q ss_pred             HHHHhcCCCccCCCceeeccC
Q 023054          234 TCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++++++ +...+++|+++..+
T Consensus       210 ~~~l~~-~~~~~~~g~~~~~~  229 (234)
T PRK07577        210 IAFLLS-DDAGFITGQVLGVD  229 (234)
T ss_pred             HHHHhC-cccCCccceEEEec
Confidence            999996 56778999988744

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.8e-31  Score=219.71  Aligned_cols=222  Identities=27%  Similarity=0.300  Sum_probs=179.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||+++++.|+++|++|++++|+.+..++..+..       .+.++.+|+++.+++.++++.    .+++|+|
T Consensus        13 lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~----~~~~d~v   81 (245)
T PRK07060         13 LVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA----AGAFDGL   81 (245)
T ss_pred             EEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH----hCCCCEE
Confidence            68999999999999999999999999999987766544332       256788999999988887765    4689999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||.....  .+.+.+++++.+.+|+.+++.+++++++.+.+...    .++||++||..+..+              
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~~~iv~~sS~~~~~~--------------  143 (245)
T PRK07060         82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR----GGSIVNVSSQAALVG--------------  143 (245)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC----CcEEEEEccHHHcCC--------------
Confidence            9999986432  24566789999999999999999999999875321    379999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|+.+|++++.+++.++.++.+.+  |++++++||++.|++....    .....+....+...+.+++|+|+.+
T Consensus       144 -~~~~~~y~~sK~a~~~~~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  220 (245)
T PRK07060        144 -LPDHLAYCASKAALDAITRVLCVELGPHG--IRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPI  220 (245)
T ss_pred             -CCCCcHhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence             45667899999999999999999999888  9999999999999975421    1112222334555678999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +++++ +...+++|++|. ++|
T Consensus       221 ~~l~~-~~~~~~~G~~~~~~~g  241 (245)
T PRK07060        221 LFLLS-DAASMVSGVSLPVDGG  241 (245)
T ss_pred             HHHcC-cccCCccCcEEeECCC
Confidence            99997 677889999887 444

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.8e-31  Score=222.88  Aligned_cols=210  Identities=22%  Similarity=0.214  Sum_probs=176.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++...++ ..  +.++.++.+|++|.++++++++.+.+ ++++|+|
T Consensus         9 lItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~l   84 (263)
T PRK09072          9 LLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PY--PGRHRWVVADLTSEAGREAVLARARE-MGGINVL   84 (263)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hc--CCceEEEEccCCCHHHHHHHHHHHHh-cCCCCEE
Confidence            69999999999999999999999999999998888777766 22  45789999999999999999998876 7899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++.+++|+.+++.+++.++|+|.+..     .++||++||..+..+              
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~--------------  145 (263)
T PRK09072         85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-----SAMVVNVGSTFGSIG--------------  145 (263)
T ss_pred             EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CCEEEEecChhhCcC--------------
Confidence            999998643  23556678899999999999999999999997754     579999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|+.+|+++.+++++++.++...+  |+|++|+||+++|++.....  ....... .....+|+++|+.+++++
T Consensus       146 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~~~t~~~~~~~--~~~~~~~-~~~~~~~~~va~~i~~~~  219 (263)
T PRK09072        146 -YPGYASYCASKFALRGFSEALRRELADTG--VRVLYLAPRATRTAMNSEAV--QALNRAL-GNAMDDPEDVAAAVLQAI  219 (263)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccccchhhhc--ccccccc-cCCCCCHHHHHHHHHHHH
Confidence             55678899999999999999999999988  99999999999998764321  1111111 123568999999999999


Q ss_pred             c
Q 023054          239 L  239 (288)
Q Consensus       239 ~  239 (288)
                      .
T Consensus       220 ~  220 (263)
T PRK09072        220 E  220 (263)
T ss_pred             h
Confidence            6

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.98  E-value=2e-30  Score=217.63  Aligned_cols=230  Identities=25%  Similarity=0.280  Sum_probs=187.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+++||++++++|+++|++|+++.|+... .+...+++...  +.++.++.+|+++.+++.++++++.+.++++|+
T Consensus         9 lItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (248)
T PRK05557          9 LVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKAEFGGVDI   86 (248)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999888886553 44555555433  467889999999999999999999988889999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||.....  .+.+.+++++.+.+|+.+++.+++.+++.+.+.+     .+++|++||..+..+             
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~v~iss~~~~~~-------------  148 (248)
T PRK05557         87 LVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-----SGRIINISSVVGLMG-------------  148 (248)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CeEEEEEcccccCcC-------------
Confidence            99999986542  3556678899999999999999999999997754     468999999876652             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|+.+|++++.+++.++.++...+  +++++++||++.|++......  ........+.....+++++++.+.
T Consensus       149 --~~~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  224 (248)
T PRK05557        149 --NPGQANYAASKAGVIGFTKSLARELASRG--ITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVA  224 (248)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              45667899999999999999999998888  999999999999988765421  112222223344578999999999


Q ss_pred             HHhcCCCccCCCceeeccCc
Q 023054          236 YVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~~  255 (288)
                      +++. +...+++|+.|..++
T Consensus       225 ~l~~-~~~~~~~g~~~~i~~  243 (248)
T PRK05557        225 FLAS-DEAAYITGQTLHVNG  243 (248)
T ss_pred             HHcC-cccCCccccEEEecC
Confidence            9996 567788999887443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=2.9e-30  Score=215.60  Aligned_cols=229  Identities=25%  Similarity=0.316  Sum_probs=186.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||||++++||.+++++|+++|++|++++|+. +..+...+.+...  +.++.++.+|++|.++++++++.+.+.++++|+
T Consensus         2 lItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         2 LVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999999875 4444555555443  456889999999999999999999888899999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||+|.....  .+.+.+.+++.+++|+.+++.+++.+.+++.+..     .++++++||..+..+             
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~v~~sS~~~~~g-------------  141 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-----SGRIINISSVVGLMG-------------  141 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CeEEEEECCccccCC-------------
Confidence            99999986432  3456678999999999999999999999987644     479999999887653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|+.+|++++.+++.++.++...+  +++++++||++.|++.......  .......+.....+++++++.++
T Consensus       142 --~~~~~~y~~~k~a~~~~~~~l~~~~~~~g--~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  217 (239)
T TIGR01830       142 --NAGQANYAASKAGVIGFTKSLAKELASRN--ITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVA  217 (239)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHH
Confidence              55678899999999999999999999888  9999999999999876543211  11222233445678999999999


Q ss_pred             HHhcCCCccCCCceeeccC
Q 023054          236 YVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~  254 (288)
                      +++. +...+++|++++.+
T Consensus       218 ~~~~-~~~~~~~g~~~~~~  235 (239)
T TIGR01830       218 FLAS-DEASYITGQVIHVD  235 (239)
T ss_pred             HHhC-cccCCcCCCEEEeC
Confidence            9996 56678899988743

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-30  Score=218.50  Aligned_cols=205  Identities=22%  Similarity=0.241  Sum_probs=173.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+++..+...+.+... ++.++.++.+|++++++++++++++.+   ++|++
T Consensus         5 lItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~v   80 (243)
T PRK07102          5 LIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---LPDIV   80 (243)
T ss_pred             EEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---cCCEE
Confidence            69999999999999999999999999999998887777766544 246799999999999999999988754   46999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|.....  .+.+.+++.+.+++|+.+++.+++.++|+|.+++     .++||++||..+..+              
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~--------------  141 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-----SGTIVGISSVAGDRG--------------  141 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-----CCEEEEEecccccCC--------------
Confidence            9999976542  2456677888999999999999999999998755     589999999877653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|+++|+++.+++++++.++...|  |+|++|+||+++|++.....        .+...+.+|+++|+.+++++
T Consensus       142 -~~~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~~~a~~i~~~~  210 (243)
T PRK07102        142 -RASNYVYGSAKAALTAFLSGLRNRLFKSG--VHVLTVKPGFVRTPMTAGLK--------LPGPLTAQPEEVAKDIFRAI  210 (243)
T ss_pred             -CCCCcccHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccChhhhccC--------CCccccCCHHHHHHHHHHHH
Confidence             45567899999999999999999999988  99999999999999765432        12334578999999999999


Q ss_pred             c
Q 023054          239 L  239 (288)
Q Consensus       239 ~  239 (288)
                      .
T Consensus       211 ~  211 (243)
T PRK07102        211 E  211 (243)
T ss_pred             h
Confidence            7

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.2e-30  Score=220.06  Aligned_cols=209  Identities=22%  Similarity=0.221  Sum_probs=170.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+..+....        ..+.++.+|+++.++++++++.+.+.++++|+|
T Consensus         5 lItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   76 (274)
T PRK05693          5 LITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA--------AGFTAVQLDVNDGAALARLAEELEAEHGGLDVL   76 (274)
T ss_pred             EEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            699999999999999999999999999999876554321        236788999999999999999999888999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++.+++|+.+++.+++.++|.|.+.      .++||++||..+..+              
T Consensus        77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~--------------  136 (274)
T PRK05693         77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS------RGLVVNIGSVSGVLV--------------  136 (274)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCEEEEECCccccCC--------------
Confidence            999997643  2356778899999999999999999999999764      479999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH-----------HHHHHH------Hh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM-----------RFLKFF------SF  221 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~-----------~~~~~~------~~  221 (288)
                       .+....|+++|++++.++++++.+++..|  |+|++|+||+++|++........           .....+      ..
T Consensus       137 -~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (274)
T PRK05693        137 -TPFAGAYCASKAAVHALSDALRLELAPFG--VQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQ  213 (274)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhcc
Confidence             45567899999999999999999999988  99999999999999876431100           000000      01


Q ss_pred             hhcCChHHHHHHHHHHhcC
Q 023054          222 FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~  240 (288)
                      ....+|+++|+.++..+..
T Consensus       214 ~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        214 DNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             CCCCCHHHHHHHHHHHHhC
Confidence            1234799999999999863

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=3.5e-30  Score=215.89  Aligned_cols=230  Identities=26%  Similarity=0.301  Sum_probs=190.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||.++++.|+++|++|++++|++.+.+.....+...  +.++.++.+|+++.+++.++++++.+.++++|++
T Consensus         9 lItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   86 (246)
T PRK05653          9 LVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEAFGALDIL   86 (246)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999998877777666544  4678899999999999999999998888899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ||++|....  ..+.+.++++..++.|+.+++.+++.+.|+|.+.+     .++||++||..+..               
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~ii~~ss~~~~~---------------  146 (246)
T PRK05653         87 VNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-----YGRIVNISSVSGVT---------------  146 (246)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEECcHHhcc---------------
Confidence            999997644  23456678899999999999999999999997754     47999999987654               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      +..+...|+.+|++++.+++++++++...+  +++++++||.+.+++......  .......++...+.+++++++.+.+
T Consensus       147 ~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  224 (246)
T PRK05653        147 GNPGQTNYSAAKAGVIGFTKALALELASRG--ITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAF  224 (246)
T ss_pred             CCCCCcHhHhHHHHHHHHHHHHHHHHhhcC--eEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            245667899999999999999999998888  999999999999988753211  1112223344556788999999999


Q ss_pred             HhcCCCccCCCceeeccCc
Q 023054          237 VALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~~~~  255 (288)
                      +++ +....++|++|..++
T Consensus       225 ~~~-~~~~~~~g~~~~~~g  242 (246)
T PRK05653        225 LAS-DAASYITGQVIPVNG  242 (246)
T ss_pred             HcC-chhcCccCCEEEeCC
Confidence            996 667788999887443

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4e-30  Score=216.23  Aligned_cols=227  Identities=20%  Similarity=0.108  Sum_probs=176.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++++.|+++|++|++++|+.+ ..+.+.+++...  +.++.++.+|+++.+++..+++++.+.++++|+
T Consensus        10 lItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (248)
T PRK07806         10 LVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTAREEFGGLDA   87 (248)
T ss_pred             EEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence            69999999999999999999999999999753 455555555543  456889999999999999999999888889999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ||||||....    ...+++..+++|+.+++.+++.+.|+|.+       .++||++||..+....          ....
T Consensus        88 vi~~ag~~~~----~~~~~~~~~~vn~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~~----------~~~~  146 (248)
T PRK07806         88 LVLNASGGME----SGMDEDYAMRLNRDAQRNLARAALPLMPA-------GSRVVFVTSHQAHFIP----------TVKT  146 (248)
T ss_pred             EEECCCCCCC----CCCCcceeeEeeeHHHHHHHHHHHhhccC-------CceEEEEeCchhhcCc----------cccC
Confidence            9999986432    12245678999999999999999999854       4699999996543210          0012


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                      .+....|+.||++++.+++.++.+++..+  |+||+|.||++.|++....    ..........+...+.+|+|+|+.++
T Consensus       147 ~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (248)
T PRK07806        147 MPEYEPVARSKRAGEDALRALRPELAEKG--IGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVA  224 (248)
T ss_pred             CccccHHHHHHHHHHHHHHHHHHHhhccC--eEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHH
Confidence            33456899999999999999999999998  9999999999998865421    00000112345557789999999999


Q ss_pred             HHhcCCCccCCCceeeccCc
Q 023054          236 YVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~~  255 (288)
                      ++++   ..+++|+.|..++
T Consensus       225 ~l~~---~~~~~g~~~~i~~  241 (248)
T PRK07806        225 RAVT---APVPSGHIEYVGG  241 (248)
T ss_pred             HHhh---ccccCccEEEecC
Confidence            9996   3577899776444

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.1e-31  Score=212.99  Aligned_cols=193  Identities=18%  Similarity=0.207  Sum_probs=160.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++ ++|++++|+..                   .+.||++|.+++++++++    .+++|+|
T Consensus         4 lItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~id~l   59 (199)
T PRK07578          4 LVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKVDAV   59 (199)
T ss_pred             EEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCCCEE
Confidence            69999999999999999999 99999998742                   368999999999998875    3689999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++.+++|+.+++++++.++|+|.+       .++|+++||..+..               
T Consensus        60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~iss~~~~~---------------  117 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-------GGSFTLTSGILSDE---------------  117 (199)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCeEEEEcccccCC---------------
Confidence            999997543  225677889999999999999999999999965       47999999988764               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                      +.++...|+++|+++++|+++++.++ +++  |+||+|+||+++|++....       ..++.....+|+++|+.+++++
T Consensus       118 ~~~~~~~Y~~sK~a~~~~~~~la~e~-~~g--i~v~~i~Pg~v~t~~~~~~-------~~~~~~~~~~~~~~a~~~~~~~  187 (199)
T PRK07578        118 PIPGGASAATVNGALEGFVKAAALEL-PRG--IRINVVSPTVLTESLEKYG-------PFFPGFEPVPAARVALAYVRSV  187 (199)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEcCCcccCchhhhh-------hcCCCCCCCCHHHHHHHHHHHh
Confidence            25677899999999999999999999 778  9999999999999874211       1123334568999999999998


Q ss_pred             cCCCccCCCceeecc
Q 023054          239 LHPNLKGVTGKYFLD  253 (288)
Q Consensus       239 ~~~~~~~~tG~~~~~  253 (288)
                      +    ...+|+.|..
T Consensus       188 ~----~~~~g~~~~~  198 (199)
T PRK07578        188 E----GAQTGEVYKV  198 (199)
T ss_pred             c----cceeeEEecc
Confidence            5    3578887753

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.8e-30  Score=218.66  Aligned_cols=212  Identities=22%  Similarity=0.234  Sum_probs=173.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+||||++++++|+++|++|++++|+.+..++..+..     +.++.++.+|++|.+++.++++++.+.++++|+|
T Consensus         6 lVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          6 FITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             EEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999987766554432     3468899999999999999999988888899999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||.....  .+.+.+++++.+++|+.+++.+++.++|+|.+..     .++||++||..+..               
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~---------------  140 (276)
T PRK06482         81 VSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-----GGRIVQVSSEGGQI---------------  140 (276)
T ss_pred             EECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEcCccccc---------------
Confidence            9999987542  3456678899999999999999999999997654     57999999987654               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----------HHHHHHHHHHh---hhc
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----------VVMRFLKFFSF---FLW  224 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----------~~~~~~~~~~~---~~~  224 (288)
                      +.++...|++||++++.++++++.++...+  |+++.+.||.+.|++.....           ....+.+.+..   ...
T Consensus       141 ~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (276)
T PRK06482        141 AYPGFSLYHATKWGIEGFVEAVAQEVAPFG--IEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIP  218 (276)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCC
Confidence            256678999999999999999999999888  99999999999988754321           00111111111   123


Q ss_pred             CChHHHHHHHHHHhc
Q 023054          225 KNVPQGAATTCYVAL  239 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~  239 (288)
                      .++++++++++..+.
T Consensus       219 ~d~~~~~~a~~~~~~  233 (276)
T PRK06482        219 GDPQKMVQAMIASAD  233 (276)
T ss_pred             CCHHHHHHHHHHHHc
Confidence            589999999999985

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=1.3e-30  Score=215.52  Aligned_cols=204  Identities=23%  Similarity=0.295  Sum_probs=176.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHH-HHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS-IKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~~id~   79 (288)
                      +|||||.|||+++|++||++|.+|++++|++++++.+.++|.+++. .++.++.+|+++.+. .+++.+.+..  ..+.+
T Consensus        53 VVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~~--~~VgI  129 (312)
T KOG1014|consen   53 VVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLAG--LDVGI  129 (312)
T ss_pred             EEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhcC--CceEE
Confidence            5899999999999999999999999999999999999999999885 889999999998886 3444444322  36889


Q ss_pred             EEEccccCCCC----CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           80 LINNAGIMFCP----YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        80 lv~~ag~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ||||+|.....    .+.+.+.++..+.+|..+...+++.++|.|.+.+     .|-||++||.++..+           
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-----~G~IvnigS~ag~~p-----------  193 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-----KGIIVNIGSFAGLIP-----------  193 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-----CceEEEecccccccc-----------
Confidence            99999998632    2455557889999999999999999999998866     799999999998874           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                          .+.+..|+++|+.+..|+++|+.|+..+|  |.|-++.|+.|.|+|.....         +.....+|+.-|...+
T Consensus       194 ----~p~~s~ysasK~~v~~~S~~L~~Ey~~~g--I~Vq~v~p~~VaTkm~~~~~---------~sl~~ps~~tfaksal  258 (312)
T KOG1014|consen  194 ----TPLLSVYSASKAFVDFFSRCLQKEYESKG--IFVQSVIPYLVATKMAKYRK---------PSLFVPSPETFAKSAL  258 (312)
T ss_pred             ----ChhHHHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEeehhheeccccccCC---------CCCcCcCHHHHHHHHH
Confidence                78889999999999999999999999999  99999999999999987542         4555678888888877


Q ss_pred             HHh
Q 023054          236 YVA  238 (288)
Q Consensus       236 ~l~  238 (288)
                      .-.
T Consensus       259 ~ti  261 (312)
T KOG1014|consen  259 NTI  261 (312)
T ss_pred             hhc
Confidence            766

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.7e-30  Score=218.34  Aligned_cols=214  Identities=22%  Similarity=0.238  Sum_probs=177.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+....++..+.+...  +.++.++.+|++|.+++..+++++.+.++++|+|
T Consensus         5 lVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   82 (263)
T PRK06181          5 IITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGGIDIL   82 (263)
T ss_pred             EEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988887777766554  4578899999999999999999999888999999


Q ss_pred             EEccccCCCC--CCC-CCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFCP--YQI-SEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~~--~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||.....  .+. +.+.+++.+++|+.+++.+++.++|+|.+.      .++||++||..+..+             
T Consensus        83 i~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~~iv~~sS~~~~~~-------------  143 (263)
T PRK06181         83 VNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS------RGQIVVVSSLAGLTG-------------  143 (263)
T ss_pred             EECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCEEEEEecccccCC-------------
Confidence            9999976542  234 667788999999999999999999998764      479999999887653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH-HHHHH--HHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV-MRFLK--FFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~--~~~~~~~~~~~~~a~~~  234 (288)
                        .++...|+.+|++++.+++.++.++...+  |+++++.||++.|++....... .....  ......+.+|+|+|+.+
T Consensus       144 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  219 (263)
T PRK06181        144 --VPTRSGYAASKHALHGFFDSLRIELADDG--VAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAI  219 (263)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHH
Confidence              55668899999999999999999999888  9999999999999986532100 00000  01112567999999999


Q ss_pred             HHHhc
Q 023054          235 CYVAL  239 (288)
Q Consensus       235 ~~l~~  239 (288)
                      ++++.
T Consensus       220 ~~~~~  224 (263)
T PRK06181        220 LPAIA  224 (263)
T ss_pred             HHHhh
Confidence            99996

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=9.3e-32  Score=202.85  Aligned_cols=230  Identities=23%  Similarity=0.247  Sum_probs=194.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||.+|+|++.+.+|+++|+.|++.+-..++.++..+++     +.++.|..+|+++++++...+...+.++|++|.+
T Consensus        13 lvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen   13 LVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             EeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            68999999999999999999999999999888888888888     7889999999999999999999999999999999


Q ss_pred             EEccccCCC--------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhc-cCCCCCeEEEEcCccccccccCCccc
Q 023054           81 INNAGIMFC--------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAK-ETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        81 v~~ag~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      |||||+...        ....+.++|++.+++|+.|+|+.++.-.-.|.++.. ++...|.||+..|+++.-        
T Consensus        88 vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd--------  159 (260)
T KOG1199|consen   88 VNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD--------  159 (260)
T ss_pred             eeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec--------
Confidence            999998643        124566899999999999999999999999987543 344578999999999765        


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH-HHHH-HHHH-hhhcCChH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV-MRFL-KFFS-FFLWKNVP  228 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~-~~~~-~~~~~~~~  228 (288)
                             +..+..+|++||.++.+++--+++.++..|  ||+|+|.||.++||+....+.. ..++ +.+| ..+...|.
T Consensus       160 -------gq~gqaaysaskgaivgmtlpiardla~~g--ir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~  230 (260)
T KOG1199|consen  160 -------GQTGQAAYSASKGAIVGMTLPIARDLAGDG--IRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPH  230 (260)
T ss_pred             -------CccchhhhhcccCceEeeechhhhhcccCc--eEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChH
Confidence                   477889999999999999999999999999  9999999999999998876322 1222 2222 23446888


Q ss_pred             HHHHHHHHHhcCCCccCCCceeeccCc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      +.+..+-...   +..+++|+.|.-+|
T Consensus       231 eyahlvqaii---enp~lngevir~dg  254 (260)
T KOG1199|consen  231 EYAHLVQAII---ENPYLNGEVIRFDG  254 (260)
T ss_pred             HHHHHHHHHH---hCcccCCeEEEecc
Confidence            9888877777   44789999987444

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=7.1e-30  Score=215.10  Aligned_cols=226  Identities=22%  Similarity=0.250  Sum_probs=177.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++..| +.+........+...  +.++.++.+|+++++++..+++++.+.++++|+
T Consensus        10 litGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (252)
T PRK06077         10 VVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATIDRYGVADI   87 (252)
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999988775 444444444444443  456788999999999999999999998899999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||.....  .+.+.+.++..+++|+.+++.+++++.|.|.+       .++||++||..+..              
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~--------------  146 (252)
T PRK06077         88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-------GGAIVNIASVAGIR--------------  146 (252)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-------CcEEEEEcchhccC--------------
Confidence            99999985442  24455678899999999999999999999865       46999999988765              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-----HHHHHHH-HHhhhcCChHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-----VMRFLKF-FSFFLWKNVPQGA  231 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~a  231 (288)
                       +.++...|+++|++++.+++.++.++++ +  |+++.+.||+++|++......     .....+. .+...+.+|+|+|
T Consensus       147 -~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  222 (252)
T PRK06077        147 -PAYGLSIYGAMKAAVINLTKYLALELAP-K--IRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVA  222 (252)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHhc-C--CEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHH
Confidence             3567789999999999999999999987 6  999999999999997543210     1111111 1223457999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCcc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.+++++..   ...+|+.|. ++++
T Consensus       223 ~~~~~~~~~---~~~~g~~~~i~~g~  245 (252)
T PRK06077        223 EFVAAILKI---ESITGQVFVLDSGE  245 (252)
T ss_pred             HHHHHHhCc---cccCCCeEEecCCe
Confidence            999999952   345676555 5443

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=1.1e-29  Score=214.31  Aligned_cols=231  Identities=26%  Similarity=0.275  Sum_probs=186.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||+++++.|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|.++++++++++.+..+++|+|
T Consensus         5 lItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   82 (255)
T TIGR01963         5 LVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGGLDIL   82 (255)
T ss_pred             EEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999988887777766543  4578999999999999999999999888899999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|.....  .+.+.+++++++++|+.+++.+++.+++.|.+..     .+++|++||..+..+              
T Consensus        83 i~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-----~~~~v~~ss~~~~~~--------------  143 (255)
T TIGR01963        83 VNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-----WGRIINIASAHGLVA--------------  143 (255)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CeEEEEEcchhhcCC--------------
Confidence            9999986542  2445677889999999999999999999997654     469999999876642              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----------HHH----HHHHHHhhhc
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----------VMR----FLKFFSFFLW  224 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----------~~~----~~~~~~~~~~  224 (288)
                       .+....|+.+|++++.+++.++.++...+  |+|+.++||++.|++......          ...    .....+...+
T Consensus       144 -~~~~~~y~~sk~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (255)
T TIGR01963       144 -SPFKSAYVAAKHGLIGLTKVLALEVAAHG--ITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRF  220 (255)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccC
Confidence             45668899999999999999999998888  999999999999886432100          000    0011122346


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .+++|+|+.++++++ +....++|+++. ++++
T Consensus       221 ~~~~d~a~~~~~~~~-~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       221 VTVDEVAETALFLAS-DAAAGITGQAIVLDGGW  252 (255)
T ss_pred             cCHHHHHHHHHHHcC-ccccCccceEEEEcCcc
Confidence            789999999999996 445677888776 4443

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.4e-29  Score=212.50  Aligned_cols=229  Identities=25%  Similarity=0.285  Sum_probs=185.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+++||++++++|+++|++|+++.|+.. ..+...+.+...  +.++.++.+|+++.+++.++++++.+.++++|+
T Consensus        10 lItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   87 (249)
T PRK12825         10 LVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVERFGRIDI   87 (249)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999888666544 444454544443  456889999999999999999999888889999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      +||+||.....  .+.+.+++++.+++|+.+++.+++.+++++.+.+     .+++|++||..+..              
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~i~~SS~~~~~--------------  148 (249)
T PRK12825         88 LVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-----GGRIVNISSVAGLP--------------  148 (249)
T ss_pred             EEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEECccccCC--------------
Confidence            99999976442  2456778899999999999999999999998764     57999999988764              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHH--HHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK--FFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~  235 (288)
                       +.++...|+.+|++++++++.++.++...+  +++++++||++.|++............  ..+...+.+++|+++.+.
T Consensus       149 -~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  225 (249)
T PRK12825        149 -GWPGRSNYAAAKAGLVGLTKALARELAEYG--ITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVA  225 (249)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHH
Confidence             245667899999999999999999998888  999999999999998765422111111  233444668999999999


Q ss_pred             HHhcCCCccCCCceeeccC
Q 023054          236 YVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++++ ....+++|++|..+
T Consensus       226 ~~~~-~~~~~~~g~~~~i~  243 (249)
T PRK12825        226 FLCS-DASDYITGQVIEVT  243 (249)
T ss_pred             HHhC-ccccCcCCCEEEeC
Confidence            9996 55678899988743

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-29  Score=215.59  Aligned_cols=227  Identities=25%  Similarity=0.315  Sum_probs=182.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||++++++|+++|++|++++|+.+..++..+...    ..++.++.+|++|++++..+++++.+.++++|+|
T Consensus        15 lItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   90 (264)
T PRK12829         15 LVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVERFGGLDVL   90 (264)
T ss_pred             EEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            699999999999999999999999999999877666554442    2257889999999999999999999888999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||+|....   ....+.+++++++++|+.+++.+++.+++.+.....    +++|+++||..+..              
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~vv~~ss~~~~~--------------  152 (264)
T PRK12829         91 VNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH----GGVIIALSSVAGRL--------------  152 (264)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CeEEEEeccccccc--------------
Confidence            999998733   235566789999999999999999999998876431    26788888877654              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-------------HHHHHHHHHhhhc
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-------------VMRFLKFFSFFLW  224 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~~~~~  224 (288)
                       +.++...|+.+|++++.+++.++.++...+  ++++++.||++.|++......             .....+.++...+
T Consensus       153 -~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~--i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (264)
T PRK12829        153 -GYPGRTPYAASKWAVVGLVKSLAIELGPLG--IRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRM  229 (264)
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCC
Confidence             355667899999999999999999998888  999999999999987543210             0111112233346


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeecc
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                      .+++++|+.+.++++ +....++|++|..
T Consensus       230 ~~~~d~a~~~~~l~~-~~~~~~~g~~~~i  257 (264)
T PRK12829        230 VEPEDIAATALFLAS-PAARYITGQAISV  257 (264)
T ss_pred             CCHHHHHHHHHHHcC-ccccCccCcEEEe
Confidence            789999999999986 5567789998873

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.4e-30  Score=214.49  Aligned_cols=198  Identities=23%  Similarity=0.249  Sum_probs=164.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+++.+++..+.      ..++.++.||++|.++++++++++..   .+|.+
T Consensus         5 lItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~   75 (240)
T PRK06101          5 LITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDHPGTKAALSQLPF---IPELW   75 (240)
T ss_pred             EEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCHHHHHHHHHhccc---CCCEE
Confidence            6999999999999999999999999999998776554432      24688899999999999999887642   47999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ....+.+++++++++|+.+++++++.++|+|.+       +++||++||..+..+              
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~--------------  134 (240)
T PRK06101         76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-------GHRVVIVGSIASELA--------------  134 (240)
T ss_pred             EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------CCeEEEEechhhccC--------------
Confidence            999986532  224566788999999999999999999999954       468999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .+....|+++|++++++++.++.++..+|  |+|+++.||++.|++.......        .....+|+++|+.++..+
T Consensus       135 -~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~i~t~~~~~~~~~--------~~~~~~~~~~a~~i~~~i  203 (240)
T PRK06101        135 -LPRAEAYGASKAAVAYFARTLQLDLRPKG--IEVVTVFPGFVATPLTDKNTFA--------MPMIITVEQASQEIRAQL  203 (240)
T ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHHHhcC--ceEEEEeCCcCCCCCcCCCCCC--------CCcccCHHHHHHHHHHHH
Confidence             55677899999999999999999999998  9999999999999987643211        112358999999999988


Q ss_pred             c
Q 023054          239 L  239 (288)
Q Consensus       239 ~  239 (288)
                      .
T Consensus       204 ~  204 (240)
T PRK06101        204 A  204 (240)
T ss_pred             h
Confidence            6

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=210.86  Aligned_cols=221  Identities=22%  Similarity=0.221  Sum_probs=182.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||++++++|+++|++|++++|+..+..+....+..    ..+.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   86 (239)
T PRK12828         11 AITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEVNRQFGRLDAL   86 (239)
T ss_pred             EEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHHHHHhCCcCEE
Confidence            6999999999999999999999999999998776666555543    246778899999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ||++|....  ....+.+++++.+.+|+.+++.++++++|.+.+++     .++||++||..+..+              
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~--------------  147 (239)
T PRK12828         87 VNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-----GGRIVNIGAGAALKA--------------  147 (239)
T ss_pred             EECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-----CCEEEEECchHhccC--------------
Confidence            999997643  22456678889999999999999999999997754     579999999887652              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|+.+|++++.+++.++.++...+  |+++++.||++.|++........      ....+.+++|+|..+++++
T Consensus       148 -~~~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~i~pg~v~~~~~~~~~~~~------~~~~~~~~~dva~~~~~~l  218 (239)
T PRK12828        148 -GPGMGAYAAAKAGVARLTEALAAELLDRG--ITVNAVLPSIIDTPPNRADMPDA------DFSRWVTPEQIAAVIAFLL  218 (239)
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCcchhhcCCch------hhhcCCCHHHHHHHHHHHh
Confidence             45667899999999999999999998888  99999999999998643221111      1122468999999999999


Q ss_pred             cCCCccCCCceeeccC
Q 023054          239 LHPNLKGVTGKYFLDC  254 (288)
Q Consensus       239 ~~~~~~~~tG~~~~~~  254 (288)
                      + +...+++|+.+..+
T Consensus       219 ~-~~~~~~~g~~~~~~  233 (239)
T PRK12828        219 S-DEAQAITGASIPVD  233 (239)
T ss_pred             C-cccccccceEEEec
Confidence            7 55667899988743

>PRK09135 pteridine reductase; Provisional

Probab=99.97  E-value=2.6e-29  Score=211.14  Aligned_cols=227  Identities=21%  Similarity=0.211  Sum_probs=178.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+++||++++++|+++|++|++++|+ .+..+.....+.... +..+.++.+|+++.+++..+++++.+.++++|+
T Consensus        10 lItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   88 (249)
T PRK09135         10 LITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVAAFGRLDA   88 (249)
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999986 444555555554332 345889999999999999999999998999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||...+.  .+.+.++++.++++|+.+++.+++++.|.+.++      .+.+++++|..+..              
T Consensus        89 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~--------------  148 (249)
T PRK09135         89 LVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ------RGAIVNITDIHAER--------------  148 (249)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC------CeEEEEEeChhhcC--------------
Confidence            99999976442  244557789999999999999999999998764      46888888765433              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-hH--HHHHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-AV--VMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~~--~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       +.++...|+.||++++.+++.++.++.+ +  ++++++.||++.|++.... ..  ........+.....+++|+++.+
T Consensus       149 -~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  224 (249)
T PRK09135        149 -PLKGYPVYCAAKAALEMLTRSLALELAP-E--VRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAV  224 (249)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHCC-C--CeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHH
Confidence             3567789999999999999999999865 5  9999999999999986432 11  11111122233446899999999


Q ss_pred             HHHhcCCCccCCCceeeccC
Q 023054          235 CYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~~  254 (288)
                      .+++. + ....+|+.+..+
T Consensus       225 ~~~~~-~-~~~~~g~~~~i~  242 (249)
T PRK09135        225 RFLLA-D-ASFITGQILAVD  242 (249)
T ss_pred             HHHcC-c-cccccCcEEEEC
Confidence            99986 3 456789977643

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=212.92  Aligned_cols=209  Identities=22%  Similarity=0.247  Sum_probs=165.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHH-HHhcC---CC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQN-FIALN---LP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~~~~~---~~   76 (288)
                      |||||++|||++++++|+++|++|++++|+....  .   ...  .+.++.++++|+++.+++++++++ +.+.+   ++
T Consensus         5 lItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          5 IVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAA--AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             EEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhc--cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            6999999999999999999999999999986531  1   111  145788999999999999997776 44433   47


Q ss_pred             cceEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           77 LNILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        77 id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      +|++|||||....   ..+.+.+++++.+++|+.+++.+++.+++.|.++.     .++||++||..+..          
T Consensus        78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~----------  142 (243)
T PRK07023         78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-----ERRILHISSGAARN----------  142 (243)
T ss_pred             ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-----CCEEEEEeChhhcC----------
Confidence            9999999998643   23456788999999999999999999999997654     57999999987665          


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hHHHHHHHHHHhhhcC
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AVVMRFLKFFSFFLWK  225 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~  225 (288)
                           +.++...|+++|++++++++.++.+ ...+  |++++|+||+++|++....        .....+....+.....
T Consensus       143 -----~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (243)
T PRK07023        143 -----AYAGWSVYCATKAALDHHARAVALD-ANRA--LRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALS  214 (243)
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHhc-CCCC--cEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCC
Confidence                 3567789999999999999999999 6667  9999999999999874321        1111223334455677


Q ss_pred             ChHHHHHHHH-HHhc
Q 023054          226 NVPQGAATTC-YVAL  239 (288)
Q Consensus       226 ~~~~~a~~~~-~l~~  239 (288)
                      +|+++|+.++ ++.+
T Consensus       215 ~~~~va~~~~~~l~~  229 (243)
T PRK07023        215 TPEDAARRLIAYLLS  229 (243)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            9999999655 5553

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=1.8e-29  Score=212.65  Aligned_cols=224  Identities=29%  Similarity=0.331  Sum_probs=178.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHhhCCC-CceEEEEecCCC-hHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA--ANEARQLILKEDDT-ARVDTLKLDLSS-IASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~-~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   76 (288)
                      |||||++|||+++|+.|+++|++|+++.++.+.  .+...+... . .+ ..+.+..+|+++ .++++.+++.+.+.+|+
T Consensus         9 lITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~   86 (251)
T COG1028           9 LVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E-AGGGRAAAVAADVSDDEESVEALVAAAEEEFGR   86 (251)
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h-cCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            699999999999999999999999988887654  333333333 1 12 368888899998 99999999999999999


Q ss_pred             cceEEEccccCC---CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           77 LNILINNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        77 id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      +|++|||||+..   +..+.+.+++++.+.+|+.+++.+++.+.|.+.+       . +||++||..+. .         
T Consensus        87 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-------~-~Iv~isS~~~~-~---------  148 (251)
T COG1028          87 IDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK-------Q-RIVNISSVAGL-G---------  148 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh-------C-eEEEECCchhc-C---------
Confidence            999999999975   3446777999999999999999999988888873       4 99999999876 4         


Q ss_pred             CCCCCCCCc-cccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH-----HHHHHHHhhhcCCh
Q 023054          154 INDRAGYSD-KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM-----RFLKFFSFFLWKNV  227 (288)
Q Consensus       154 ~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~  227 (288)
                            .++ ..+|++||+|+.+|++.++.++.+.|  |+||+|+||++.|++........     ......+..+...|
T Consensus       149 ------~~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (251)
T COG1028         149 ------GPPGQAAYAASKAALIGLTKALALELAPRG--IRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTP  220 (251)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCH
Confidence                  333 48999999999999999999999999  99999999999999987542211     11111122255678


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      ++++..+.|+.+.....+.+|..+.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~g~~~~  245 (251)
T COG1028         221 EEVAAAVAFLASDEAASYITGQTLP  245 (251)
T ss_pred             HHHHHHHHHHcCcchhccccCCEEE
Confidence            8999999988863335567777654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.7e-30  Score=242.35  Aligned_cols=208  Identities=25%  Similarity=0.240  Sum_probs=178.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||+++++.|+++|++|++++|+++.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus       375 lItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l  452 (657)
T PRK07201        375 LITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYL  452 (657)
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            68999999999999999999999999999999888888777654  4578999999999999999999999999999999


Q ss_pred             EEccccCCCCC--CC--CCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFCPY--QI--SEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~~~--~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+.....  ..  +.+++++++++|+.+++.+++.++|.|.+++     .++||++||..+..+            
T Consensus       453 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~------------  515 (657)
T PRK07201        453 VNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-----FGHVVNVSSIGVQTN------------  515 (657)
T ss_pred             EECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-----CCEEEEECChhhcCC------------
Confidence            99999754321  11  2367899999999999999999999998765     589999999987652            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                         .+....|++||+++++|+++++.++...+  |+||+|+||+++|++......       .......+|+++|+.++.
T Consensus       516 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~T~~~~~~~~-------~~~~~~~~~~~~a~~i~~  583 (657)
T PRK07201        516 ---APRFSAYVASKAALDAFSDVAASETLSDG--ITFTTIHMPLVRTPMIAPTKR-------YNNVPTISPEEAADMVVR  583 (657)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHHHhhC--CcEEEEECCcCcccccCcccc-------ccCCCCCCHHHHHHHHHH
Confidence               45667899999999999999999999988  999999999999998764311       112335689999999999


Q ss_pred             Hhc
Q 023054          237 VAL  239 (288)
Q Consensus       237 l~~  239 (288)
                      .+.
T Consensus       584 ~~~  586 (657)
T PRK07201        584 AIV  586 (657)
T ss_pred             HHH
Confidence            885

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=2.8e-29  Score=238.38  Aligned_cols=231  Identities=23%  Similarity=0.257  Sum_probs=190.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+||||+++++.|+++|++|++++|+.+.++....++...   .++.++.+|+++.+++.++++++.+.++++|+|
T Consensus       426 LVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvv  502 (681)
T PRK08324        426 LVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAFGGVDIV  502 (681)
T ss_pred             EEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998887777666432   468899999999999999999999889999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||.....  .+.+.++|+..+++|+.+++.+++.+++.|.+++.    +++||++||..+..+              
T Consensus       503 I~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~----~g~iV~vsS~~~~~~--------------  564 (681)
T PRK08324        503 VSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL----GGSIVFIASKNAVNP--------------  564 (681)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CcEEEEECCccccCC--------------
Confidence            9999986542  35677889999999999999999999999987531    379999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcc--cCCCCCCChH----------HH----HHHHHHHhh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLI--MTNLFKHSAV----------VM----RFLKFFSFF  222 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v--~t~~~~~~~~----------~~----~~~~~~~~~  222 (288)
                       .++...|+++|++++.+++.++.+++..|  |+||+|+||.+  .|++......          ..    ......+..
T Consensus       565 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~  641 (681)
T PRK08324        565 -GPNFGAYGAAKAAELHLVRQLALELGPDG--IRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLK  641 (681)
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcC
Confidence             45678899999999999999999999998  99999999999  8877543210          00    111122334


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ....++|+|+.++++++ +.....+|+.+. ++|.
T Consensus       642 ~~v~~~DvA~a~~~l~s-~~~~~~tG~~i~vdgG~  675 (681)
T PRK08324        642 REVTPEDVAEAVVFLAS-GLLSKTTGAIITVDGGN  675 (681)
T ss_pred             CccCHHHHHHHHHHHhC-ccccCCcCCEEEECCCc
Confidence            45789999999999996 667788999887 4443

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=3.3e-29  Score=207.37  Aligned_cols=181  Identities=27%  Similarity=0.319  Sum_probs=162.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC--CCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN--LPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~id   78 (288)
                      +|||+-+|.|+.+|++|.++|+.|...+-+++..+.+..+..    ..++..+..|++++++++++.+.+++..  .++-
T Consensus        33 lITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLw  108 (322)
T KOG1610|consen   33 LITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLW  108 (322)
T ss_pred             EEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHhcccccce
Confidence            699999999999999999999999999988887777666654    4678899999999999999999988864  3599


Q ss_pred             eEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      .||||||+...   .+..+.+++++.+++|++|++.+++.++|+++++      .||||+|||+.|..+           
T Consensus       109 glVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a------rGRvVnvsS~~GR~~-----------  171 (322)
T KOG1610|consen  109 GLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA------RGRVVNVSSVLGRVA-----------  171 (322)
T ss_pred             eEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc------cCeEEEecccccCcc-----------
Confidence            99999997643   4466779999999999999999999999999987      599999999999874           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH  208 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~  208 (288)
                          .+...+|++||+|++.|+.++++|+.+.|  |+|..|.||+..|++...
T Consensus       172 ----~p~~g~Y~~SK~aVeaf~D~lR~EL~~fG--V~VsiiePG~f~T~l~~~  218 (322)
T KOG1610|consen  172 ----LPALGPYCVSKFAVEAFSDSLRRELRPFG--VKVSIIEPGFFKTNLANP  218 (322)
T ss_pred             ----CcccccchhhHHHHHHHHHHHHHHHHhcC--cEEEEeccCccccccCCh
Confidence                67778999999999999999999999999  999999999999999873

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-28  Score=204.33  Aligned_cols=216  Identities=22%  Similarity=0.271  Sum_probs=178.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||+|+||++++++|+++|++|++++|+++++++..+++...   .+++++.+|+++.+++..+++++.+.++++|+|
T Consensus        10 lItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   86 (237)
T PRK07326         10 LITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVL   86 (237)
T ss_pred             EEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999998888777776543   468899999999999999999999888899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||+|....  ..+.+.+++++.+++|+.+++.+++++++.+.+.      .++||++||..+..+              
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~iv~~ss~~~~~~--------------  146 (237)
T PRK07326         87 IANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG------GGYIINISSLAGTNF--------------  146 (237)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC------CeEEEEECChhhccC--------------
Confidence            999997643  2356677889999999999999999999998432      478999999876542              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       ..+...|+.+|+++..+++.++.++...|  +++++|.||++.|++........       .....+++++++.+++++
T Consensus       147 -~~~~~~y~~sk~a~~~~~~~~~~~~~~~g--i~v~~v~pg~~~t~~~~~~~~~~-------~~~~~~~~d~a~~~~~~l  216 (237)
T PRK07326        147 -FAGGAAYNASKFGLVGFSEAAMLDLRQYG--IKVSTIMPGSVATHFNGHTPSEK-------DAWKIQPEDIAQLVLDLL  216 (237)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeccccCcccccccchh-------hhccCCHHHHHHHHHHHH
Confidence             44567899999999999999999999888  99999999999998765432110       111358999999999999


Q ss_pred             cCCCccCCCcee
Q 023054          239 LHPNLKGVTGKY  250 (288)
Q Consensus       239 ~~~~~~~~tG~~  250 (288)
                      . .....+.+..
T Consensus       217 ~-~~~~~~~~~~  227 (237)
T PRK07326        217 K-MPPRTLPSKI  227 (237)
T ss_pred             h-CCccccccce
Confidence            7 4444444443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3.9e-30  Score=200.40  Aligned_cols=178  Identities=24%  Similarity=0.292  Sum_probs=156.9

Q ss_pred             CcccCC-ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh-cCCCcc
Q 023054            1 MLAGGA-SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA-LNLPLN   78 (288)
Q Consensus         1 lItGas-~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~id   78 (288)
                      ||||++ ||||.+++++|++.|+.|+.++|+.+.-.++..+       ..+...++|+++++++..+..++.+ .+|++|
T Consensus        11 lItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen   11 LITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             EEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            467665 8999999999999999999999998765554432       3488999999999999999999998 689999


Q ss_pred             eEEEccccC--CCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           79 ILINNAGIM--FCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        79 ~lv~~ag~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +|+||||..  .|..+.+.+..++.|++|++|.+.+++++...+.+.      .|.||+++|..+..+            
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika------KGtIVnvgSl~~~vp------------  145 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA------KGTIVNVGSLAGVVP------------  145 (289)
T ss_pred             EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc------cceEEEecceeEEec------------
Confidence            999999975  334467778899999999999999999999777766      599999999999875            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH  208 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~  208 (288)
                         .+-...|.+||+|++++++.|+-|+++-|  |+|..+.||.|.|++...
T Consensus       146 ---fpf~~iYsAsKAAihay~~tLrlEl~PFg--v~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  146 ---FPFGSIYSASKAAIHAYARTLRLELKPFG--VRVINAITGGVATDIADK  192 (289)
T ss_pred             ---cchhhhhhHHHHHHHHhhhhcEEeeeccc--cEEEEecccceecccccC
Confidence               66778999999999999999999999999  999999999999998765

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.2e-28  Score=205.86  Aligned_cols=223  Identities=17%  Similarity=0.130  Sum_probs=179.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||.++++.|+++|++|++++|+++..+++...+...   .+++++.+|+++.++++++++++...++++|.+
T Consensus         9 lItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~i   85 (238)
T PRK05786          9 AIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKVLNAIDGL   85 (238)
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            59999999999999999999999999999988877665555432   368899999999999999999988888899999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |+|+|........+.++++.++++|+.+++.+++.++|.+.+       ++++|++||..+...              ..
T Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~--------------~~  144 (238)
T PRK05786         86 VVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-------GSSIVLVSSMSGIYK--------------AS  144 (238)
T ss_pred             EEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-------CCEEEEEecchhccc--------------CC
Confidence            999987543222233778899999999999999999999865       478999999865421              23


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHH-hhhcCChHHHHHHHHHHhc
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFS-FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~l~~  239 (288)
                      ++...|+.+|+++..+++.++.++...+  |++++|.||++.|++.....    +..... .....+++++++.++++++
T Consensus       145 ~~~~~Y~~sK~~~~~~~~~~~~~~~~~g--i~v~~i~pg~v~~~~~~~~~----~~~~~~~~~~~~~~~~va~~~~~~~~  218 (238)
T PRK05786        145 PDQLSYAVAKAGLAKAVEILASELLGRG--IRVNGIAPTTISGDFEPERN----WKKLRKLGDDMAPPEDFAKVIIWLLT  218 (238)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCCCCchhh----hhhhccccCCCCCHHHHHHHHHHHhc
Confidence            4567899999999999999999999888  99999999999998753221    111101 1124689999999999997


Q ss_pred             CCCccCCCceeeccC
Q 023054          240 HPNLKGVTGKYFLDC  254 (288)
Q Consensus       240 ~~~~~~~tG~~~~~~  254 (288)
                       +....++|.++..+
T Consensus       219 -~~~~~~~g~~~~~~  232 (238)
T PRK05786        219 -DEADWVDGVVIPVD  232 (238)
T ss_pred             -ccccCccCCEEEEC
Confidence             66778899877643

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7e-29  Score=205.73  Aligned_cols=206  Identities=22%  Similarity=0.225  Sum_probs=164.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+++..+++..       ..++.++.+|++|.++++++++.+..  +++|+|
T Consensus         5 lItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~v   75 (225)
T PRK08177          5 LIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-------LPGVHIEKLDMNDPASLDQLLQRLQG--QRFDLL   75 (225)
T ss_pred             EEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-------ccccceEEcCCCCHHHHHHHHHHhhc--CCCCEE
Confidence            689999999999999999999999999999876544321       13577889999999999999988754  479999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+..+    ..+.+.++++..+.+|+.+++.+++.++|.+.+.      .++|+++||..+....+          
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~iv~~ss~~g~~~~~----------  139 (225)
T PRK08177         76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG------QGVLAFMSSQLGSVELP----------  139 (225)
T ss_pred             EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc------CCEEEEEccCccccccC----------
Confidence            999998643    2355677899999999999999999999998653      47899999977654211          


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                        ...+...|+++|++++.|++.++.+++.++  |+||+|+||+++|++.....             ..++++.+..++.
T Consensus       140 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~i~PG~i~t~~~~~~~-------------~~~~~~~~~~~~~  202 (225)
T PRK08177        140 --DGGEMPLYKASKAALNSMTRSFVAELGEPT--LTVLSMHPGWVKTDMGGDNA-------------PLDVETSVKGLVE  202 (225)
T ss_pred             --CCCCccchHHHHHHHHHHHHHHHHHhhcCC--eEEEEEcCCceecCCCCCCC-------------CCCHHHHHHHHHH
Confidence              123456799999999999999999999988  99999999999999975431             1367778888888


Q ss_pred             HhcCCCccCCCcee
Q 023054          237 VALHPNLKGVTGKY  250 (288)
Q Consensus       237 l~~~~~~~~~tG~~  250 (288)
                      .+.  ......|..
T Consensus       203 ~~~--~~~~~~~~~  214 (225)
T PRK08177        203 QIE--AASGKGGHR  214 (225)
T ss_pred             HHH--hCCccCCCc
Confidence            774  334434443

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.97  E-value=1e-28  Score=194.85  Aligned_cols=229  Identities=17%  Similarity=0.138  Sum_probs=190.9

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      ||+|-.  +.|+..||+.|.++|+++.+++.++ ++++-.+++.+..  ....+++||+++.+++.++++++.++++++|
T Consensus        10 lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD   86 (259)
T COG0623          10 LIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFATIKKKWGKLD   86 (259)
T ss_pred             EEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHHHHHhhCccc
Confidence            355543  6899999999999999999999987 4554455554442  2367789999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      .|||+-++...      ..+.+.|+|...+++..++...+.+++.|+|..       +|+||-++-..+.+.        
T Consensus        87 ~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~-------ggSiltLtYlgs~r~--------  151 (259)
T COG0623          87 GLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN-------GGSILTLTYLGSERV--------  151 (259)
T ss_pred             EEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC-------CCcEEEEEeccceee--------
Confidence            99999998753      236778999999999999999999999999977       689998887776553        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHH----HHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF----LKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~  228 (288)
                             .|.+...+++|+++++-+|.||.+++++|  ||||.|+-|+++|-.......+..+    ....|.++..++|
T Consensus       152 -------vPnYNvMGvAKAaLEasvRyLA~dlG~~g--IRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~e  222 (259)
T COG0623         152 -------VPNYNVMGVAKAALEASVRYLAADLGKEG--IRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIE  222 (259)
T ss_pred             -------cCCCchhHHHHHHHHHHHHHHHHHhCccC--eEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHH
Confidence                   56667889999999999999999999999  9999999999999776665433333    3345778888999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +|++..+||+| +.++.+||+.+- |+|..
T Consensus       223 eVG~tA~fLlS-dLssgiTGei~yVD~G~~  251 (259)
T COG0623         223 EVGNTAAFLLS-DLSSGITGEIIYVDSGYH  251 (259)
T ss_pred             HhhhhHHHHhc-chhcccccceEEEcCCce
Confidence            99999999998 999999999654 66653

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.96  E-value=6.2e-29  Score=208.17  Aligned_cols=211  Identities=24%  Similarity=0.197  Sum_probs=160.3

Q ss_pred             HHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccccCCCCCC
Q 023054           13 TARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQ   92 (288)
Q Consensus        13 ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~   92 (288)
                      +|+.|+++|++|++++|+.+..+             ...++++|++|.++++++++++.   +++|+||||||+..    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            47899999999999999876532             12457899999999999988763   68999999999752    


Q ss_pred             CCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC------CC------CCCCC
Q 023054           93 ISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK------IN------DRAGY  160 (288)
Q Consensus        93 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~------~~------~~~~~  160 (288)
                        .++++..+++|+.+++.+++.++|+|.+       .|+||++||..+...++..-...+      ++      ...+.
T Consensus        61 --~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (241)
T PRK12428         61 --TAPVELVARVNFLGLRHLTEALLPRMAP-------GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPV  131 (241)
T ss_pred             --CCCHHHhhhhchHHHHHHHHHHHHhccC-------CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCC
Confidence              2468999999999999999999999854       479999999987642110000000      00      01235


Q ss_pred             CccccchhhHHHHHHHHHHHH-HHhcccCCceEEEEeeCCcccCCCCCCChHH---HHH-HHHHHhhhcCChHHHHHHHH
Q 023054          161 SDKKAYGQSKLANILHANELS-RRFQEEGVNITANSVHPGLIMTNLFKHSAVV---MRF-LKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la-~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~---~~~-~~~~~~~~~~~~~~~a~~~~  235 (288)
                      ++...|++||+++.++++.++ .+++.+|  |+||+|+||++.|+|.......   ... ....+..+..+|+++|+.++
T Consensus       132 ~~~~~Y~~sK~a~~~~~~~la~~e~~~~g--irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~  209 (241)
T PRK12428        132 ALATGYQLSKEALILWTMRQAQPWFGARG--IRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLV  209 (241)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHhhhccC--eEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHH
Confidence            567889999999999999999 9999988  9999999999999987643110   111 11124445679999999999


Q ss_pred             HHhcCCCccCCCceeec-cCc
Q 023054          236 YVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |+++ +...+++|+.+. ++|
T Consensus       210 ~l~s-~~~~~~~G~~i~vdgg  229 (241)
T PRK12428        210 FLCS-DAARWINGVNLPVDGG  229 (241)
T ss_pred             HHcC-hhhcCccCcEEEecCc
Confidence            9996 778899999776 444

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=2.7e-28  Score=201.52  Aligned_cols=218  Identities=20%  Similarity=0.159  Sum_probs=185.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|||+++|||+++|.++..+|++|.++.|+.+++.++.+++.-...-..+.+.++|+.|.+++..+++++.+..+.+|.+
T Consensus        37 ~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l  116 (331)
T KOG1210|consen   37 LITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNL  116 (331)
T ss_pred             EEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceE
Confidence            58999999999999999999999999999999999999999876544458899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |+|||..-+  ..+.+++.++..+++|+.++++++++.++.|++..+    .|+|+.+||.++..+              
T Consensus       117 ~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~----~g~I~~vsS~~a~~~--------------  178 (331)
T KOG1210|consen  117 FCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREH----LGRIILVSSQLAMLG--------------  178 (331)
T ss_pred             EEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcccc----CcEEEEehhhhhhcC--------------
Confidence            999998765  457888999999999999999999999999988542    369999999998873              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHH--HhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF--SFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~~  236 (288)
                       ..+.++|+++|+|+.+|+..+++|+.+.+  |+|....|+.++||-........+....+  ..-....+|+.|..++.
T Consensus       179 -i~GysaYs~sK~alrgLa~~l~qE~i~~~--v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~  255 (331)
T KOG1210|consen  179 -IYGYSAYSPSKFALRGLAEALRQELIKYG--VHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVK  255 (331)
T ss_pred             -cccccccccHHHHHHHHHHHHHHHHhhcc--eEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHh
Confidence             77889999999999999999999999999  99999999999999655332111111111  11122578899998887


Q ss_pred             Hhc
Q 023054          237 VAL  239 (288)
Q Consensus       237 l~~  239 (288)
                      -+.
T Consensus       256 ~~~  258 (331)
T KOG1210|consen  256 GMK  258 (331)
T ss_pred             HHh
Confidence            774

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-27  Score=200.17  Aligned_cols=209  Identities=24%  Similarity=0.226  Sum_probs=165.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++..+.....  +.++.++.+|++|.+++..+++      +++|+|
T Consensus         6 lVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~id~v   77 (257)
T PRK09291          6 LITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WDVDVL   77 (257)
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CCCCEE
Confidence            69999999999999999999999999999988777666655443  3468899999999988877653      379999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++++..+++|+.+++.+++.+++.+.+..     .++||++||..+...              
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~SS~~~~~~--------------  138 (257)
T PRK09291         78 LNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-----KGKVVFTSSMAGLIT--------------  138 (257)
T ss_pred             EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CceEEEEcChhhccC--------------
Confidence            999998654  23566788999999999999999999999998764     479999999877652              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-H-H---HHHHHHH------hhhcCCh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-V-M---RFLKFFS------FFLWKNV  227 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-~-~---~~~~~~~------~~~~~~~  227 (288)
                       .++...|+.+|++++.+++.++.++...|  |++++|+||++.|++...... . .   .....++      .....++
T Consensus       139 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (257)
T PRK09291        139 -GPFTGAYCASKHALEAIAEAMHAELKPFG--IQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDP  215 (257)
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCH
Confidence             45567899999999999999999999888  999999999999987543210 0 0   0000011      1112478


Q ss_pred             HHHHHHHHHHhc
Q 023054          228 PQGAATTCYVAL  239 (288)
Q Consensus       228 ~~~a~~~~~l~~  239 (288)
                      ++++..++.++.
T Consensus       216 ~~~~~~~~~~l~  227 (257)
T PRK09291        216 QEMIDAMVEVIP  227 (257)
T ss_pred             HHHHHHHHHHhc
Confidence            889888888875

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=3.9e-28  Score=191.88  Aligned_cols=158  Identities=37%  Similarity=0.457  Sum_probs=141.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCC--hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARN--MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||++|||++++++|+++|. .|++++|+  .+..+++.+++...  +.++.++++|+++.++++++++++.+.++++
T Consensus         4 lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~l   81 (167)
T PF00106_consen    4 LITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRFGPL   81 (167)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHHSSE
T ss_pred             EEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence            6999999999999999999965 78999999  77777887888755  5889999999999999999999999888999


Q ss_pred             ceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           78 NILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        78 d~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |++|||||.....  .+.+.+++++++++|+.+++.+.+.++|   +.      .++||++||..+..+           
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~------~g~iv~~sS~~~~~~-----------  141 (167)
T PF00106_consen   82 DILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP---QG------GGKIVNISSIAGVRG-----------  141 (167)
T ss_dssp             SEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---HT------TEEEEEEEEGGGTSS-----------
T ss_pred             cccccccccccccccccccchhhhhccccccceeeeeeehhee---cc------ccceEEecchhhccC-----------
Confidence            9999999998743  2556789999999999999999999999   22      589999999998874           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHh
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRF  184 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~  184 (288)
                          .+....|+++|+|+.+|++++++|+
T Consensus       142 ----~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  142 ----SPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             ----STTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHhc
Confidence                7788999999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=5.6e-29  Score=196.16  Aligned_cols=225  Identities=16%  Similarity=0.095  Sum_probs=179.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |+||+|+|||..++..+..++......+++....+  .+.+...++ ........|++...-..++.+..+..++..|++
T Consensus        10 llTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gkr~ii   86 (253)
T KOG1204|consen   10 LLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGKRDII   86 (253)
T ss_pred             EEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCceeEE
Confidence            68999999999999988888776555555544333  222222332 444455678888888889999888889999999


Q ss_pred             EEccccCCCC-----CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           81 INNAGIMFCP-----YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        81 v~~ag~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |||||...+.     ...+.++|.+.|++|+++.+.|.+.++|.+++++-    .+.||||||.++..+           
T Consensus        87 I~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~----~~~vVnvSS~aav~p-----------  151 (253)
T KOG1204|consen   87 IHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV----NGNVVNVSSLAAVRP-----------  151 (253)
T ss_pred             EecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc----cCeEEEecchhhhcc-----------
Confidence            9999998762     25667889999999999999999999999988631    479999999999885           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hHHHHHHHHHHhhhcCCh
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AVVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~  227 (288)
                          ++++..||++|+|.++|++.+|.|-. .+  +++.++.||.++|+|....        .....+.+........+|
T Consensus       152 ----~~~wa~yc~~KaAr~m~f~~lA~EEp-~~--v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~  224 (253)
T KOG1204|consen  152 ----FSSWAAYCSSKAARNMYFMVLASEEP-FD--VRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDP  224 (253)
T ss_pred             ----ccHHHHhhhhHHHHHHHHHHHhhcCc-cc--eeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCCh
Confidence                89999999999999999999999976 66  9999999999999997543        122334445566777899


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      ...|..+..|+...  .+++|+++.
T Consensus       225 ~~~a~~l~~L~e~~--~f~sG~~vd  247 (253)
T KOG1204|consen  225 QVTAKVLAKLLEKG--DFVSGQHVD  247 (253)
T ss_pred             hhHHHHHHHHHHhc--Ccccccccc
Confidence            99999999999633  289999875

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.8e-27  Score=194.92  Aligned_cols=206  Identities=23%  Similarity=0.226  Sum_probs=165.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||++++++|+++|++|++++|+.+..+++..    .    .+.++.+|+++.++++++++++..  .++|++
T Consensus         5 lvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~----~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~v   74 (222)
T PRK06953          5 LIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L----GAEALALDVADPASVAGLAWKLDG--EALDAA   74 (222)
T ss_pred             EEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c----cceEEEecCCCHHHHHHHHHHhcC--CCCCEE
Confidence            689999999999999999999999999999876554321    1    256889999999999998876642  479999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||+|....    ..+.+.++++..+++|+.+++.++++++|+|.+.      .++++++||..+..+...         
T Consensus        75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~~---------  139 (222)
T PRK06953         75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA------GGVLAVLSSRMGSIGDAT---------  139 (222)
T ss_pred             EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc------CCeEEEEcCccccccccc---------
Confidence            999998632    2245678899999999999999999999988653      478999999876553100         


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                         ..+...|+.+|++++.+++.++.++.  +  ++||+|+||+++|++.....             ..++++.++.+..
T Consensus       140 ---~~~~~~Y~~sK~a~~~~~~~~~~~~~--~--i~v~~v~Pg~i~t~~~~~~~-------------~~~~~~~~~~~~~  199 (222)
T PRK06953        140 ---GTTGWLYRASKAALNDALRAASLQAR--H--ATCIALHPGWVRTDMGGAQA-------------ALDPAQSVAGMRR  199 (222)
T ss_pred             ---CCCccccHHhHHHHHHHHHHHhhhcc--C--cEEEEECCCeeecCCCCCCC-------------CCCHHHHHHHHHH
Confidence               11223699999999999999998863  4  99999999999999866421             2478999999999


Q ss_pred             HhcCCCccCCCceeec
Q 023054          237 VALHPNLKGVTGKYFL  252 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~  252 (288)
                      ++. ......+|.||.
T Consensus       200 ~~~-~~~~~~~~~~~~  214 (222)
T PRK06953        200 VIA-QATRRDNGRFFQ  214 (222)
T ss_pred             HHH-hcCcccCceEEe
Confidence            886 456778899885

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=8.8e-27  Score=196.75  Aligned_cols=210  Identities=29%  Similarity=0.281  Sum_probs=169.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-CCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-LPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~   79 (288)
                      |||||+||||.++++.|+++|++|++++|+.++.+...+        ..+.++.+|++|.+++..+++.+.... +++|.
T Consensus         6 lVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          6 LITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS--------LGFTGILLDLDDPESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh--------CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence            699999999999999999999999999999877654321        136788999999999999998887643 68999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      +|||+|....  ..+.+.+++++.+++|+.+++.+++.+++.|.+.+     .++||++||..+..+             
T Consensus        78 ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-----~~~iv~~ss~~~~~~-------------  139 (256)
T PRK08017         78 LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-----EGRIVMTSSVMGLIS-------------  139 (256)
T ss_pred             EEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-----CCEEEEEcCcccccC-------------
Confidence            9999997543  23567788999999999999999999999998754     579999999876652             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH---H-HHHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM---R-FLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~---~-~~~~~~~~~~~~~~~~a~~  233 (288)
                        .+....|+++|++++.++++++.++...+  +++++|.||++.|++........   . .........+.+|+|+++.
T Consensus       140 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  215 (256)
T PRK08017        140 --TPGRGAYAASKYALEAWSDALRMELRHSG--IKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPK  215 (256)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHH
Confidence              45667899999999999999999999888  99999999999998765431110   0 0111122345789999999


Q ss_pred             HHHHhcC
Q 023054          234 TCYVALH  240 (288)
Q Consensus       234 ~~~l~~~  240 (288)
                      +..++..
T Consensus       216 ~~~~~~~  222 (256)
T PRK08017        216 LRHALES  222 (256)
T ss_pred             HHHHHhC
Confidence            9999963

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.3e-26  Score=194.10  Aligned_cols=190  Identities=16%  Similarity=0.086  Sum_probs=140.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.....+   .. ..  .. ..++.+|++|.+++.+       .++++|+|
T Consensus        18 lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~--~~-~~~~~~D~~~~~~~~~-------~~~~iDil   83 (245)
T PRK12367         18 GITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE--SP-NEWIKWECGKEESLDK-------QLASLDVL   83 (245)
T ss_pred             EEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc--CC-CeEEEeeCCCHHHHHH-------hcCCCCEE
Confidence            699999999999999999999999999998732211   11 11  11 3678899999887654       34689999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||+... .+.+.+++++.+++|+.+++.+++.++|.|.++....  ++.+++.+|.++..                .
T Consensus        84 VnnAG~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~--g~~iiv~ss~a~~~----------------~  144 (245)
T PRK12367         84 ILNHGINPG-GRQDPENINKALEINALSSWRLLELFEDIALNNNSQI--PKEIWVNTSEAEIQ----------------P  144 (245)
T ss_pred             EECCccCCc-CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCC--CeEEEEEecccccC----------------C
Confidence            999997533 2456788999999999999999999999997631100  23344445544432                2


Q ss_pred             CccccchhhHHHHHHHH---HHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          161 SDKKAYGQSKLANILHA---NELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~---~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                      +....|++||+|+..+.   +.++.++...+  ++|++++||+++|++...              ...+|+++|+.++++
T Consensus       145 ~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~--i~v~~~~pg~~~t~~~~~--------------~~~~~~~vA~~i~~~  208 (245)
T PRK12367        145 ALSPSYEISKRLIGQLVSLKKNLLDKNERKK--LIIRKLILGPFRSELNPI--------------GIMSADFVAKQILDQ  208 (245)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhhcccc--cEEEEecCCCcccccCcc--------------CCCCHHHHHHHHHHH
Confidence            23467999999986544   34444445667  999999999999987421              135899999999999


Q ss_pred             hc
Q 023054          238 AL  239 (288)
Q Consensus       238 ~~  239 (288)
                      +.
T Consensus       209 ~~  210 (245)
T PRK12367        209 AN  210 (245)
T ss_pred             Hh
Confidence            96

>PRK08264 short chain dehydrogenase; Validated

Probab=99.95  E-value=1.4e-26  Score=193.37  Aligned_cols=193  Identities=25%  Similarity=0.306  Sum_probs=163.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||+++|++|+++|+ +|++++|+.++.++         .+.++.++.+|++|.+++.++++.    .+++|+
T Consensus        10 lItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~   76 (238)
T PRK08264         10 LVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA----ASDVTI   76 (238)
T ss_pred             EEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHh----cCCCCE
Confidence            6999999999999999999999 99999999876543         145789999999999999887765    367999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||++|....   ..+.+.+++.+.+++|+.+++.++++++|.+.+.+     .+++|++||..+..             
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~v~~sS~~~~~-------------  138 (238)
T PRK08264         77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-----GGAIVNVLSVLSWV-------------  138 (238)
T ss_pred             EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEcChhhcc-------------
Confidence            9999998332   23556788999999999999999999999997754     57999999988765             


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                        +.++...|+.+|++++.+++.++.++...+  ++++++.||.++|++......           ...+++++++.++.
T Consensus       139 --~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~v~pg~v~t~~~~~~~~-----------~~~~~~~~a~~~~~  203 (238)
T PRK08264        139 --NFPNLGTYSASKAAAWSLTQALRAELAPQG--TRVLGVHPGPIDTDMAAGLDA-----------PKASPADVARQILD  203 (238)
T ss_pred             --CCCCchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeCCcccccccccCCc-----------CCCCHHHHHHHHHH
Confidence              255678899999999999999999999888  999999999999998654311           13688999999998


Q ss_pred             Hhc
Q 023054          237 VAL  239 (288)
Q Consensus       237 l~~  239 (288)
                      .+.
T Consensus       204 ~~~  206 (238)
T PRK08264        204 ALE  206 (238)
T ss_pred             HHh
Confidence            885

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.2e-25  Score=184.71  Aligned_cols=203  Identities=21%  Similarity=0.228  Sum_probs=161.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+++||+++++.|+++ ++|++++|+.+..++.....      ..++++.+|++|.+++.++++.+    +++|+|
T Consensus         7 lVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~----~~id~v   75 (227)
T PRK08219          7 LITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQL----GRLDVL   75 (227)
T ss_pred             EEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHhc----CCCCEE
Confidence            68999999999999999999 99999999987665543322      24788999999999998887653    479999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ||++|.....  .+.+.+++.+.+++|+.+++.+++.+++.+.++      .+++|++||..+..+              
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~v~~ss~~~~~~--------------  135 (227)
T PRK08219         76 VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA------HGHVVFINSGAGLRA--------------  135 (227)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCeEEEEcchHhcCc--------------
Confidence            9999986432  245667889999999999999999999998775      479999999887642              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|+.+|.+++.+++.++.++...   |++++|.||++.|++.......  .....+...+.+++|+|+.+++++
T Consensus       136 -~~~~~~y~~~K~a~~~~~~~~~~~~~~~---i~~~~i~pg~~~~~~~~~~~~~--~~~~~~~~~~~~~~dva~~~~~~l  209 (227)
T PRK08219        136 -NPGWGSYAASKFALRALADALREEEPGN---VRVTSVHPGRTDTDMQRGLVAQ--EGGEYDPERYLRPETVAKAVRFAV  209 (227)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhcCC---ceEEEEecCCccchHhhhhhhh--hccccCCCCCCCHHHHHHHHHHHH
Confidence             4556789999999999999998887654   9999999999988765432111  011122234578999999999999


Q ss_pred             cC
Q 023054          239 LH  240 (288)
Q Consensus       239 ~~  240 (288)
                      +.
T Consensus       210 ~~  211 (227)
T PRK08219        210 DA  211 (227)
T ss_pred             cC
Confidence            74

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.93  E-value=1.2e-24  Score=173.97  Aligned_cols=226  Identities=25%  Similarity=0.329  Sum_probs=183.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-----EEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRKA-----HVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-----~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      ||||+++|||.++|.+|.+...     +|++++|+.++++++...+..-+|  ..++.++.+|++++.|+.+...+++++
T Consensus         7 lITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~r   86 (341)
T KOG1478|consen    7 LITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQR   86 (341)
T ss_pred             EEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHH
Confidence            6999999999999999998654     588899999999999999998887  566889999999999999999999999


Q ss_pred             CCCcceEEEccccCCCC-----------------------------CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhh
Q 023054           74 NLPLNILINNAGIMFCP-----------------------------YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTA  124 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~~-----------------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  124 (288)
                      +.++|.+..|||++...                             -..+.|++...|+.|++|+|.+++.+.|++..+.
T Consensus        87 f~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~  166 (341)
T KOG1478|consen   87 FQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSD  166 (341)
T ss_pred             hhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCC
Confidence            99999999999975320                             0246689999999999999999999999998865


Q ss_pred             ccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC
Q 023054          125 KETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN  204 (288)
Q Consensus       125 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~  204 (288)
                           ...+|++||..+..   .++..+|++...   +..+|..||.+...+.-++-+.+.+.|  +.-++++||..-|.
T Consensus       167 -----~~~lvwtSS~~a~k---k~lsleD~q~~k---g~~pY~sSKrl~DlLh~A~~~~~~~~g--~~qyvv~pg~~tt~  233 (341)
T KOG1478|consen  167 -----NPQLVWTSSRMARK---KNLSLEDFQHSK---GKEPYSSSKRLTDLLHVALNRNFKPLG--INQYVVQPGIFTTN  233 (341)
T ss_pred             -----CCeEEEEeeccccc---ccCCHHHHhhhc---CCCCcchhHHHHHHHHHHHhccccccc--hhhhcccCceeecc
Confidence                 56899999987654   566666665544   457799999999999999999999999  88999999999988


Q ss_pred             CCCCCh-HHHH--------HHHHHHhhhc-CChHHHHHHHHHHhc
Q 023054          205 LFKHSA-VVMR--------FLKFFSFFLW-KNVPQGAATTCYVAL  239 (288)
Q Consensus       205 ~~~~~~-~~~~--------~~~~~~~~~~-~~~~~~a~~~~~l~~  239 (288)
                      +....- +...        ..+.+....- .+|-..|++.+|+..
T Consensus       234 ~~~~~l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~l  278 (341)
T KOG1478|consen  234 SFSEYLNPFTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVTL  278 (341)
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHhcCcccccCccccccchhhhhh
Confidence            866441 1110        1111122221 356678999999986

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.92  E-value=7.5e-24  Score=187.66  Aligned_cols=190  Identities=19%  Similarity=0.137  Sum_probs=142.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||++++++|+++|++|++++|+++++++..   ...  ...+..+.+|++|.+++.+.+       +++|++
T Consensus       182 LITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~--~~~v~~v~~Dvsd~~~v~~~l-------~~IDiL  249 (406)
T PRK07424        182 AVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE--DLPVKTLHWQVGQEAALAELL-------EKVDIL  249 (406)
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc--CCCeEEEEeeCCCHHHHHHHh-------CCCCEE
Confidence            68999999999999999999999999999877654322   111  234678899999988776543       479999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||+... .+.+.+++++++++|+.+++.+++.++|.|.+++.. ..++.+|++|+ +...                .
T Consensus       250 InnAGi~~~-~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~-~~~~iiVn~Ss-a~~~----------------~  310 (406)
T PRK07424        250 IINHGINVH-GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDK-ATKEVWVNTSE-AEVN----------------P  310 (406)
T ss_pred             EECCCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCeEEEEEcc-cccc----------------C
Confidence            999997643 245677899999999999999999999999775311 01234566654 3221                2


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhcC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  240 (288)
                      +....|++||+|+..++. ++++.  .+  +.|..+.||++.|++.+.              ...+||++|+.+++++..
T Consensus       311 ~~~~~Y~ASKaAl~~l~~-l~~~~--~~--~~I~~i~~gp~~t~~~~~--------------~~~spe~vA~~il~~i~~  371 (406)
T PRK07424        311 AFSPLYELSKRALGDLVT-LRRLD--AP--CVVRKLILGPFKSNLNPI--------------GVMSADWVAKQILKLAKR  371 (406)
T ss_pred             CCchHHHHHHHHHHHHHH-HHHhC--CC--CceEEEEeCCCcCCCCcC--------------CCCCHHHHHHHHHHHHHC
Confidence            234679999999999974 44442  34  667778899999987431              125899999999999973

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.90  E-value=4.9e-23  Score=213.51  Aligned_cols=176  Identities=21%  Similarity=0.193  Sum_probs=147.1

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCCh-----------------------------------------------H
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNM-----------------------------------------------A   32 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~-----------------------------------------------~   32 (288)
                      |||||++|||.++|++|+++ |++|++++|+.                                               .
T Consensus      2001 LVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~~~ 2080 (2582)
T TIGR02813      2001 LVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLSSL 2080 (2582)
T ss_pred             EEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccchhH
Confidence            69999999999999999998 69999999982                                               0


Q ss_pred             HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccccCCCC--CCCCCCcchhhhhhhhhHHH
Q 023054           33 AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHF  110 (288)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~  110 (288)
                      ......+.+...  +.++.++.||++|.++++++++++.+. ++||+||||||+....  .+.+.++|++.|++|+.|.+
T Consensus      2081 ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~ 2157 (2582)
T TIGR02813      2081 EIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLL 2157 (2582)
T ss_pred             HHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHH
Confidence            111222223222  567899999999999999999999876 6899999999987542  36788999999999999999


Q ss_pred             HHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCc
Q 023054          111 LLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVN  190 (288)
Q Consensus       111 ~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~  190 (288)
                      ++++++.+.+         .++||++||+.+..               +.++...|+++|.+++.+++.++.++.  +  
T Consensus      2158 ~Ll~al~~~~---------~~~IV~~SSvag~~---------------G~~gqs~YaaAkaaL~~la~~la~~~~--~-- 2209 (2582)
T TIGR02813      2158 SLLAALNAEN---------IKLLALFSSAAGFY---------------GNTGQSDYAMSNDILNKAALQLKALNP--S-- 2209 (2582)
T ss_pred             HHHHHHHHhC---------CCeEEEEechhhcC---------------CCCCcHHHHHHHHHHHHHHHHHHHHcC--C--
Confidence            9999987654         34899999999876               366788999999999999999998874  3  


Q ss_pred             eEEEEeeCCcccCCCCC
Q 023054          191 ITANSVHPGLIMTNLFK  207 (288)
Q Consensus       191 i~v~~v~PG~v~t~~~~  207 (288)
                      ++|++|+||+++|+|..
T Consensus      2210 irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2210 AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             cEEEEEECCeecCCccc
Confidence            89999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.89  E-value=4.2e-21  Score=165.99  Aligned_cols=243  Identities=11%  Similarity=0.006  Sum_probs=167.6

Q ss_pred             CcccCCChhHHH--HHHHHHHCCCEEEEEeCChHHH------------HHHHHHHHhhCCCCceEEEEecCCChHHHHHH
Q 023054            1 MLAGGASGIGLE--TARVLALRKAHVIIAARNMAAA------------NEARQLILKEDDTARVDTLKLDLSSIASIKDF   66 (288)
Q Consensus         1 lItGas~gIG~~--ia~~La~~G~~V~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   66 (288)
                      ||||+++|||.+  +|+.| ++|++|+++++..+..            +.+.+.+...  +..+..+.||+++.+++.++
T Consensus        45 LVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~E~v~~l  121 (398)
T PRK13656         45 LVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSDEIKQKV  121 (398)
T ss_pred             EEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHH
Confidence            699999999999  89999 9999988888533221            1233333332  45677889999999999999


Q ss_pred             HHHHHhcCCCcceEEEccccCCCCC-----------------------C-------------CCCCcchhhhhhhhhHH-
Q 023054           67 AQNFIALNLPLNILINNAGIMFCPY-----------------------Q-------------ISEDGIEMQFATNHIGH-  109 (288)
Q Consensus        67 ~~~~~~~~~~id~lv~~ag~~~~~~-----------------------~-------------~~~~~~~~~~~~n~~~~-  109 (288)
                      ++++.+.+|+||+||||+|......                       +             .+.++++.++  +++|. 
T Consensus       122 ie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--~vMgge  199 (398)
T PRK13656        122 IELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--KVMGGE  199 (398)
T ss_pred             HHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--Hhhccc
Confidence            9999999999999999999763211                       0             1111222222  23333 


Q ss_pred             ----HHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCcc--ccchhhHHHHHHHHHHHHHH
Q 023054          110 ----FLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK--KAYGQSKLANILHANELSRR  183 (288)
Q Consensus       110 ----~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~~  183 (288)
                          |.=.....+.|.+       ++++|-.|...+...               ++.+  ..-|.+|++|+.-++.|+.+
T Consensus       200 dw~~Wi~al~~a~lla~-------g~~~va~TY~G~~~t---------------~p~Y~~g~mG~AKa~LE~~~r~La~~  257 (398)
T PRK13656        200 DWELWIDALDEAGVLAE-------GAKTVAYSYIGPELT---------------HPIYWDGTIGKAKKDLDRTALALNEK  257 (398)
T ss_pred             hHHHHHHHHHhcccccC-------CcEEEEEecCCccee---------------ecccCCchHHHHHHHHHHHHHHHHHH
Confidence                1123333444533       689999999876653               4333  35689999999999999999


Q ss_pred             hcccCCceEEEEeeCCcccCCCCCCChHHHHHH---HHHHhhhcCChHHHHHHHHHHhcCCCccCCCce--eeccCccCC
Q 023054          184 FQEEGVNITANSVHPGLIMTNLFKHSAVVMRFL---KFFSFFLWKNVPQGAATTCYVALHPNLKGVTGK--YFLDCNEMP  258 (288)
Q Consensus       184 ~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~--~~~~~~~~~  258 (288)
                      |++.|  ||+|++.+|.+.|......+......   -++..- ...-|.+.+.+..|.. +. -|-.|.  -+.+.+..+
T Consensus       258 L~~~g--iran~i~~g~~~T~Ass~Ip~~~ly~~~l~kvmk~-~g~he~~ieq~~rl~~-~~-ly~~~~~~~~d~~~r~r  332 (398)
T PRK13656        258 LAAKG--GDAYVSVLKAVVTQASSAIPVMPLYISLLFKVMKE-KGTHEGCIEQIYRLFS-ER-LYRDGAIPEVDEEGRLR  332 (398)
T ss_pred             hhhcC--CEEEEEecCcccchhhhcCCCcHHHHHHHHHHHHh-cCCCCChHHHHHHHHH-Hh-cccCCCCCCcCCcCCcc
Confidence            99998  99999999999999877664322222   111111 1356788888888885 22 221222  145677889


Q ss_pred             CCccccCHHHHH---HHHHH
Q 023054          259 PSALARDETLAK---KLWDF  275 (288)
Q Consensus       259 ~~~~~~~~~~~~---~~~~~  275 (288)
                      .+++.+++++|+   ++|+.
T Consensus       333 ~d~~el~~~vq~~v~~~~~~  352 (398)
T PRK13656        333 LDDWELRPDVQAAVRELWPQ  352 (398)
T ss_pred             cchhhcCHHHHHHHHHHHHH
Confidence            999999999996   55553

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.88  E-value=2.1e-21  Score=176.29  Aligned_cols=207  Identities=13%  Similarity=0.047  Sum_probs=150.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh-----C--CCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE-----D--DTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-----~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |||||+||||++++++|+++|++|++++|+.++++.+.+++...     +  ...++.++.+|++|.+++.+.+      
T Consensus        84 LVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL------  157 (576)
T PLN03209         84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL------  157 (576)
T ss_pred             EEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh------
Confidence            69999999999999999999999999999998887776655431     1  1235889999999988876543      


Q ss_pred             CCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           74 NLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                       +++|+||||+|....    ...++...+++|+.+..++++++...    +     .++||++||..+...         
T Consensus       158 -ggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g-----VgRIV~VSSiga~~~---------  214 (576)
T PLN03209        158 -GNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA----K-----VNHFILVTSLGTNKV---------  214 (576)
T ss_pred             -cCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh----C-----CCEEEEEccchhccc---------
Confidence             579999999997532    12246778999999999999888643    1     469999999875321         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHHHHHHHHHhhhcCChHHHH
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~a  231 (288)
                           +.+. ..|. +|.++..+.+.+..++...|  |+++.|+||++.|++....  ..........+..+..+.+|+|
T Consensus       215 -----g~p~-~~~~-sk~~~~~~KraaE~~L~~sG--IrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA  285 (576)
T PLN03209        215 -----GFPA-AILN-LFWGVLCWKRKAEEALIASG--LPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVA  285 (576)
T ss_pred             -----Cccc-cchh-hHHHHHHHHHHHHHHHHHcC--CCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHH
Confidence                 0111 1233 77888888888888888888  9999999999998764311  0000001112334456899999


Q ss_pred             HHHHHHhcCCCccC
Q 023054          232 ATTCYVALHPNLKG  245 (288)
Q Consensus       232 ~~~~~l~~~~~~~~  245 (288)
                      +.++|+++++...+
T Consensus       286 ~vVvfLasd~~as~  299 (576)
T PLN03209        286 ELMACMAKNRRLSY  299 (576)
T ss_pred             HHHHHHHcCchhcc
Confidence            99999997554454

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.87  E-value=1.9e-21  Score=154.45  Aligned_cols=170  Identities=24%  Similarity=0.245  Sum_probs=136.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHH---HHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEA---RQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      +||||++|||.+++++|+++|+ .|++++|+++..+..   .+++...  +.++.++.+|+++.++++++++++...+++
T Consensus         4 li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (180)
T smart00822        4 LITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPARLGP   81 (180)
T ss_pred             EEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999997 688888876543322   2333332  457889999999999999999999888899


Q ss_pred             cceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           77 LNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        77 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      +|+||||+|....  ....+.++++..+++|+.+++.+++.+.+.    .     .++++++||..+..+          
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~ii~~ss~~~~~~----------  142 (180)
T smart00822       82 LRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL----P-----LDFFVLFSSVAGVLG----------  142 (180)
T ss_pred             eeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC----C-----cceEEEEccHHHhcC----------
Confidence            9999999997643  235667889999999999999999988431    1     478999999887653          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCccc
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM  202 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~  202 (288)
                           .+....|+++|.++..+++.+    ...+  +++.++.||++.
T Consensus       143 -----~~~~~~y~~sk~~~~~~~~~~----~~~~--~~~~~~~~g~~~  179 (180)
T smart00822      143 -----NPGQANYAAANAFLDALAAHR----RARG--LPATSINWGAWA  179 (180)
T ss_pred             -----CCCchhhHHHHHHHHHHHHHH----HhcC--CceEEEeecccc
Confidence                 456678999999988877665    3456  889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.86  E-value=2.9e-20  Score=162.25  Aligned_cols=197  Identities=16%  Similarity=0.129  Sum_probs=145.6

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||+++++.|+++|  ++|++++|+..........+    +..++.++.+|++|.+++.++++       ++|
T Consensus         8 LVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~-------~iD   76 (324)
T TIGR03589         8 LITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR-------GVD   76 (324)
T ss_pred             EEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh-------cCC
Confidence            699999999999999999987  68999998866543333222    13468899999999998887764       589


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+||.....  ....+..+.+++|+.+++++++++.+.    +     .++||++||...                 
T Consensus        77 ~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~aa~~~----~-----~~~iV~~SS~~~-----------------  128 (324)
T TIGR03589        77 YVVHAAALKQVP--AAEYNPFECIRTNINGAQNVIDAAIDN----G-----VKRVVALSTDKA-----------------  128 (324)
T ss_pred             EEEECcccCCCc--hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEEeCCCC-----------------
Confidence            999999975321  122334679999999999999998753    1     358999999643                 


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHH-H---HH------hhhcCChH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK-F---FS------FFLWKNVP  228 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~-~---~~------~~~~~~~~  228 (288)
                       ..+...|++||++.+.+++.++.+++..+  ++++++.||.+.++-..-.+....... .   ++      .+.+..++
T Consensus       129 -~~p~~~Y~~sK~~~E~l~~~~~~~~~~~g--i~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~  205 (324)
T TIGR03589       129 -ANPINLYGATKLASDKLFVAANNISGSKG--TRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLE  205 (324)
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHhhccccC--cEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHH
Confidence             22346799999999999999988888888  999999999998764221111111110 0   11      01245789


Q ss_pred             HHHHHHHHHhc
Q 023054          229 QGAATTCYVAL  239 (288)
Q Consensus       229 ~~a~~~~~l~~  239 (288)
                      |+++.++.++.
T Consensus       206 D~a~a~~~al~  216 (324)
T TIGR03589       206 QGVNFVLKSLE  216 (324)
T ss_pred             HHHHHHHHHHh
Confidence            99999999985

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.86  E-value=6e-20  Score=155.20  Aligned_cols=230  Identities=20%  Similarity=0.177  Sum_probs=161.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||||.||+++++.|+++||+|+.+.|+++..+.......-++...++..+..||+|++++...++       ++|+|
T Consensus        10 cVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------gcdgV   82 (327)
T KOG1502|consen   10 CVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------GCDGV   82 (327)
T ss_pred             EEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------CCCEE
Confidence            48999999999999999999999999999998855432222223335679999999999999999887       69999


Q ss_pred             EEccccCCCCCCCCCCcch-hhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIE-MQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      +|.|......    .++.+ +.++..+.|+.++++++...-.        =-|||++||.++.............-.+..
T Consensus        83 fH~Asp~~~~----~~~~e~~li~pav~Gt~nVL~ac~~~~s--------VkrvV~TSS~aAv~~~~~~~~~~~vvdE~~  150 (327)
T KOG1502|consen   83 FHTASPVDFD----LEDPEKELIDPAVKGTKNVLEACKKTKS--------VKRVVYTSSTAAVRYNGPNIGENSVVDEES  150 (327)
T ss_pred             EEeCccCCCC----CCCcHHhhhhHHHHHHHHHHHHHhccCC--------cceEEEeccHHHhccCCcCCCCCccccccc
Confidence            9999876442    12244 7999999999999999976541        138999999998876422222221112222


Q ss_pred             CCc-------cccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHH---------Hh
Q 023054          160 YSD-------KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFF---------SF  221 (288)
Q Consensus       160 ~~~-------~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~---------~~  221 (288)
                      |..       ...|+.||.-.+..+..++.+-   +  +.+.+|+||.|..|......  ......+.+         ..
T Consensus       151 wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~--~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~  225 (327)
T KOG1502|consen  151 WSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---G--LDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFW  225 (327)
T ss_pred             CCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---C--ccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCc
Confidence            211       1458888887666555555553   3  88999999999998877631  111111111         12


Q ss_pred             hhcCChHHHHHHHHHHhcCCCccCCCceeeccCccC
Q 023054          222 FLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEM  257 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~~~~  257 (288)
                      ..+.+.+|+|.+-++++..+.+.   |+|++.+...
T Consensus       226 ~~~VdVrDVA~AHv~a~E~~~a~---GRyic~~~~~  258 (327)
T KOG1502|consen  226 LAFVDVRDVALAHVLALEKPSAK---GRYICVGEVV  258 (327)
T ss_pred             eeeEeHHHHHHHHHHHHcCcccC---ceEEEecCcc
Confidence            23467889999999999755444   9999865443

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=7.1e-20  Score=160.04  Aligned_cols=218  Identities=13%  Similarity=0.104  Sum_probs=150.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+....+.............++.++.+|+++.+++.++++       ++|+|
T Consensus         9 lVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v   81 (325)
T PLN02989          9 CVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------GCETV   81 (325)
T ss_pred             EEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------CCCEE
Confidence            69999999999999999999999999998876554432222211112468899999999998887775       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc-cccCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI-RFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~~~~~~~~~~  159 (288)
                      |||||....  ..+.+.+.+.+++|+.+++++++++.+.+.        .++||++||..+........ ....+++...
T Consensus        82 ih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~--------~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~  151 (325)
T PLN02989         82 FHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVSS--------VKRVILTSSMAAVLAPETKLGPNDVVDETFF  151 (325)
T ss_pred             EEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcCC--------ceEEEEecchhheecCCccCCCCCccCcCCC
Confidence            999996532  234456788999999999999999987531        35899999987665321100 0111222222


Q ss_pred             CC------ccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-hHHHH-HHHHHHh--------hh
Q 023054          160 YS------DKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-AVVMR-FLKFFSF--------FL  223 (288)
Q Consensus       160 ~~------~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~~~~~-~~~~~~~--------~~  223 (288)
                      ..      ....|+.||.+.+.+++.++++.   +  +.++.+.|+.+..+..... ..... +......        ..
T Consensus       152 ~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~  226 (325)
T PLN02989        152 TNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---E--IDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHR  226 (325)
T ss_pred             CchhHhcccccchHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcC
Confidence            21      23579999999999888877654   4  8889999999988765431 11111 1111110        12


Q ss_pred             cCChHHHHHHHHHHhcC
Q 023054          224 WKNVPQGAATTCYVALH  240 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~  240 (288)
                      +...+|+|++++.++..
T Consensus       227 ~i~v~Dva~a~~~~l~~  243 (325)
T PLN02989        227 FVDVRDVALAHVKALET  243 (325)
T ss_pred             eeEHHHHHHHHHHHhcC
Confidence            33579999999999864

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=4.2e-19  Score=153.20  Aligned_cols=225  Identities=13%  Similarity=0.026  Sum_probs=148.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA--ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++|++|+++.|+...  ..+....+...  +.++.++.+|++|.+++..++.       .+|
T Consensus        10 lVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~-------~~d   80 (297)
T PLN02583         10 CVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK-------GCS   80 (297)
T ss_pred             EEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc-------CCC
Confidence            699999999999999999999999999986432  22222222211  3468889999999988765543       578


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc-cCCccccCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY-KGGIRFQKINDR  157 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~-~~~~~~~~~~~~  157 (288)
                      .++|.++....   . ...+++++++|+.+++++++++.+.+.        -++||++||..+.... +.......+++.
T Consensus        81 ~v~~~~~~~~~---~-~~~~~~~~~~nv~gt~~ll~aa~~~~~--------v~riV~~SS~~a~~~~~~~~~~~~~~~E~  148 (297)
T PLN02583         81 GLFCCFDPPSD---Y-PSYDEKMVDVEVRAAHNVLEACAQTDT--------IEKVVFTSSLTAVIWRDDNISTQKDVDER  148 (297)
T ss_pred             EEEEeCccCCc---c-cccHHHHHHHHHHHHHHHHHHHHhcCC--------ccEEEEecchHheecccccCCCCCCCCcc
Confidence            99987754321   1 124678999999999999999987641        2599999998775421 111111122222


Q ss_pred             CCCCc------cccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-HHHHHHHHH--HhhhcCChH
Q 023054          158 AGYSD------KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-VVMRFLKFF--SFFLWKNVP  228 (288)
Q Consensus       158 ~~~~~------~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-~~~~~~~~~--~~~~~~~~~  228 (288)
                      ...+.      ...|+.||...+.+++.++++.   +  +++++|.|+.+.++...... .........  ....+...+
T Consensus       149 ~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---g--i~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~  223 (297)
T PLN02583        149 SWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---G--VNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVN  223 (297)
T ss_pred             cCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---C--CcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHH
Confidence            11111      1269999999998887776553   5  99999999999887643211 000000000  112356789


Q ss_pred             HHHHHHHHHhcCCCccCCCceeeccC
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      |+|++.+.++..+.   ..|+|+..+
T Consensus       224 Dva~a~~~al~~~~---~~~r~~~~~  246 (297)
T PLN02583        224 FLVDAHIRAFEDVS---SYGRYLCFN  246 (297)
T ss_pred             HHHHHHHHHhcCcc---cCCcEEEec
Confidence            99999999996332   246776543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=1.3e-18  Score=151.90  Aligned_cols=218  Identities=18%  Similarity=0.207  Sum_probs=145.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|+++.|+....+.............++.++.+|+++.+++.++++       ++|+|
T Consensus         9 lVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~v   81 (322)
T PLN02986          9 CVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------GCDAV   81 (322)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------CCCEE
Confidence            69999999999999999999999999999876544333222211113468899999999998887775       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc-cccCCccccCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY-TYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~~~~~~~~~~~~  159 (288)
                      ||+|+.....   ..+...+.+++|+.++.++++++....   .     -.+||++||..... ..+.......+++...
T Consensus        82 ih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~---~-----v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~  150 (322)
T PLN02986         82 FHTASPVFFT---VKDPQTELIDPALKGTINVLNTCKETP---S-----VKRVILTSSTAAVLFRQPPIEANDVVDETFF  150 (322)
T ss_pred             EEeCCCcCCC---CCCchhhhhHHHHHHHHHHHHHHHhcC---C-----ccEEEEecchhheecCCccCCCCCCcCcccC
Confidence            9999974321   122335678999999999998875421   1     24899999987643 1111000011111111


Q ss_pred             C------CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-hHHHHHH-HHHH--------hhh
Q 023054          160 Y------SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-AVVMRFL-KFFS--------FFL  223 (288)
Q Consensus       160 ~------~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~~~~~~~-~~~~--------~~~  223 (288)
                      .      .+...|+.||.+.+.+++.+.++.   +  +.++++.|+.+.++..... ....... ....        ...
T Consensus       151 ~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  225 (322)
T PLN02986        151 SDPSLCRETKNWYPLSKILAENAAWEFAKDN---G--IDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYR  225 (322)
T ss_pred             CChHHhhccccchHHHHHHHHHHHHHHHHHh---C--CeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcc
Confidence            1      124679999999988888877654   5  8999999999998864321 1011111 1111        013


Q ss_pred             cCChHHHHHHHHHHhcCC
Q 023054          224 WKNVPQGAATTCYVALHP  241 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~  241 (288)
                      +...+|+|++++.++..+
T Consensus       226 ~v~v~Dva~a~~~al~~~  243 (322)
T PLN02986        226 FVDVRDVALAHIKALETP  243 (322)
T ss_pred             eeEHHHHHHHHHHHhcCc
Confidence            457899999999999643

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.82  E-value=5e-20  Score=147.30  Aligned_cols=170  Identities=23%  Similarity=0.256  Sum_probs=127.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCCh---HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNM---AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||++|||..+++.|+++|. +|++++|+.   ...++..++++..  +.++.++.||++|++++.++++.+.+.+++
T Consensus         4 litGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    4 LITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            6999999999999999999986 799999993   2344566666665  678999999999999999999999999999


Q ss_pred             cceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           77 LNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        77 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      |+.|||+||....  ..+.+.+.++..+...+.+..+|.+.+.+.-         -..+|++||+++..           
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~---------l~~~i~~SSis~~~-----------  141 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP---------LDFFILFSSISSLL-----------  141 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT---------TSEEEEEEEHHHHT-----------
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC---------CCeEEEECChhHhc-----------
Confidence            9999999998754  3467788999999999999999998886511         35899999999987           


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCccc
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM  202 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~  202 (288)
                          |.++...|+++...++.|++..    ...+  .++.+|+.|..+
T Consensus       142 ----G~~gq~~YaaAN~~lda~a~~~----~~~g--~~~~sI~wg~W~  179 (181)
T PF08659_consen  142 ----GGPGQSAYAAANAFLDALARQR----RSRG--LPAVSINWGAWD  179 (181)
T ss_dssp             ----T-TTBHHHHHHHHHHHHHHHHH----HHTT--SEEEEEEE-EBS
T ss_pred             ----cCcchHhHHHHHHHHHHHHHHH----HhCC--CCEEEEEccccC
Confidence                4778899999988887776653    3345  668888877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.82  E-value=3e-19  Score=157.57  Aligned_cols=216  Identities=16%  Similarity=0.108  Sum_probs=151.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||+++++.|+++|++|++++|+..........+..   ..++.++.+|+++.+++.+++++.     ++|+|
T Consensus         8 lItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~v   79 (349)
T TIGR02622         8 LVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF-----KPEIV   79 (349)
T ss_pred             EEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc-----CCCEE
Confidence            6999999999999999999999999999987654433332321   245778999999999998888754     68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+....  ..+.+++...+++|+.+++.+++++...   ..     .+++|++||...+.....   ...+.+....
T Consensus        80 ih~A~~~~~--~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~-----~~~iv~~SS~~vyg~~~~---~~~~~e~~~~  146 (349)
T TIGR02622        80 FHLAAQPLV--RKSYADPLETFETNVMGTVNLLEAIRAI---GS-----VKAVVNVTSDKCYRNDEW---VWGYRETDPL  146 (349)
T ss_pred             EECCccccc--ccchhCHHHHHHHhHHHHHHHHHHHHhc---CC-----CCEEEEEechhhhCCCCC---CCCCccCCCC
Confidence            999996432  2344667889999999999999987431   11     258999999764421100   0112233334


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcc----cCCceEEEEeeCCcccCCCCCCC-hHHHHHHHHHH------------hhh
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQE----EGVNITANSVHPGLIMTNLFKHS-AVVMRFLKFFS------------FFL  223 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~----~~~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~------------~~~  223 (288)
                      .+...|+.+|.+.+.+++.++.++..    .+  ++++++.|+.+..+-.... .....+.+...            .+-
T Consensus       147 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~--i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd  224 (349)
T TIGR02622       147 GGHDPYSSSKACAELVIASYRSSFFGVANFHG--IKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRP  224 (349)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHhhcccccCC--CcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccc
Confidence            56678999999999999999988755    36  9999999999987632111 11112222111            112


Q ss_pred             cCChHHHHHHHHHHhc
Q 023054          224 WKNVPQGAATTCYVAL  239 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~  239 (288)
                      +...+|++++++.++.
T Consensus       225 ~i~v~D~a~a~~~~~~  240 (349)
T TIGR02622       225 WQHVLEPLSGYLLLAE  240 (349)
T ss_pred             eeeHHHHHHHHHHHHH
Confidence            2355699999887764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.82  E-value=1.9e-18  Score=152.59  Aligned_cols=217  Identities=18%  Similarity=0.077  Sum_probs=146.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+..................++.++.+|+++.+.+.++++       .+|+|
T Consensus         9 LVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------~~d~V   81 (351)
T PLN02650          9 CVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------GCTGV   81 (351)
T ss_pred             EEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------CCCEE
Confidence            69999999999999999999999999999876655443322211112358899999999988877765       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc---cccCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI---RFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~---~~~~~~~~  157 (288)
                      ||+|+.....   ..+..+..+++|+.++.++++++.+...        ..+||++||...........   ........
T Consensus        82 iH~A~~~~~~---~~~~~~~~~~~Nv~gt~~ll~aa~~~~~--------~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~  150 (351)
T PLN02650         82 FHVATPMDFE---SKDPENEVIKPTVNGMLSIMKACAKAKT--------VRRIVFTSSAGTVNVEEHQKPVYDEDCWSDL  150 (351)
T ss_pred             EEeCCCCCCC---CCCchhhhhhHHHHHHHHHHHHHHhcCC--------ceEEEEecchhhcccCCCCCCccCcccCCch
Confidence            9999864321   1233457899999999999999876431        14899999985543211110   10100000


Q ss_pred             ----CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHHHHHHH----------HHh
Q 023054          158 ----AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVMRFLKF----------FSF  221 (288)
Q Consensus       158 ----~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~----------~~~  221 (288)
                          ....+...|+.||.+.+.+++.+++++   +  ++++.+.|+.+.+|.....  .........          ...
T Consensus       151 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (351)
T PLN02650        151 DFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---G--LDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQ  225 (351)
T ss_pred             hhhhccccccchHHHHHHHHHHHHHHHHHHc---C--CeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCC
Confidence                011123479999999999988887763   5  8999999999988854321  101111000          011


Q ss_pred             hhcCChHHHHHHHHHHhcC
Q 023054          222 FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~  240 (288)
                      +.+...+|+|+++++++..
T Consensus       226 r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        226 GQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             cceeeHHHHHHHHHHHhcC
Confidence            3456889999999999963

>PLN02214 cinnamoyl-CoA reductase

Probab=99.79  E-value=1.2e-17  Score=146.88  Aligned_cols=219  Identities=19%  Similarity=0.190  Sum_probs=148.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH-HHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA-RQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++|++|++++|+.+..... ...+..  ...++.++.+|++|.+++.++++       ++|+
T Consensus        14 lVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   84 (342)
T PLN02214         14 CVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID-------GCDG   84 (342)
T ss_pred             EEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh-------cCCE
Confidence            6999999999999999999999999999986543221 222221  12458889999999988877765       5899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC-
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA-  158 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~-  158 (288)
                      |||+|+..       .+++.+.+++|+.++.++++++...    .     -.+||++||..+.++.+.......+++.. 
T Consensus        85 Vih~A~~~-------~~~~~~~~~~nv~gt~~ll~aa~~~----~-----v~r~V~~SS~~avyg~~~~~~~~~~~E~~~  148 (342)
T PLN02214         85 VFHTASPV-------TDDPEQMVEPAVNGAKFVINAAAEA----K-----VKRVVITSSIGAVYMDPNRDPEAVVDESCW  148 (342)
T ss_pred             EEEecCCC-------CCCHHHHHHHHHHHHHHHHHHHHhc----C-----CCEEEEeccceeeeccCCCCCCcccCcccC
Confidence            99999864       1346788999999999999988642    1     24899999976655322111001122221 


Q ss_pred             -----CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHHHHHHHHH---------hh
Q 023054          159 -----GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVMRFLKFFS---------FF  222 (288)
Q Consensus       159 -----~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~---------~~  222 (288)
                           ...+...|+.||.+.+.+++.++++.   +  +++..+.|+.+-.+.....  .....+.+...         .+
T Consensus       149 ~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g--~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  223 (342)
T PLN02214        149 SDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---G--VDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQ  223 (342)
T ss_pred             CChhhccccccHHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCc
Confidence                 11244679999999999888877664   4  8899999999987753321  11111111110         11


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      -+...+|+|++++.++.++.   ..|.|+.
T Consensus       224 ~~i~V~Dva~a~~~al~~~~---~~g~yn~  250 (342)
T PLN02214        224 AYVDVRDVALAHVLVYEAPS---ASGRYLL  250 (342)
T ss_pred             CeeEHHHHHHHHHHHHhCcc---cCCcEEE
Confidence            23468899999999986322   2356654

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.79  E-value=1.7e-17  Score=146.75  Aligned_cols=223  Identities=14%  Similarity=0.120  Sum_probs=143.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEE-EEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVI-IAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||+++++.|.++|++++ ++++.... ... ..+....+..++.++.+|++|.++++++++..     ++|+
T Consensus         5 lVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~   77 (355)
T PRK10217          5 LITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPDC   77 (355)
T ss_pred             EEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCCE
Confidence            6999999999999999999998755 44543221 111 11111111346788899999999988887752     6999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||+||....  ..+.++++..+++|+.+++.+++++.+.|...........++|++||...+.....  ....+++...
T Consensus        78 Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~--~~~~~~E~~~  153 (355)
T PRK10217         78 VMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHS--TDDFFTETTP  153 (355)
T ss_pred             EEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCC--CCCCcCCCCC
Confidence            9999997543  22345678899999999999999998764311000000248999998754321100  0112334444


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHH-H-----HH-------hhhcCC
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK-F-----FS-------FFLWKN  226 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~-~-----~~-------~~~~~~  226 (288)
                      ..+...|+.||.+.+.+++.++++++     +++..+.|+.+-.+-.........+.. .     ++       ..-+..
T Consensus       154 ~~p~s~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  228 (355)
T PRK10217        154 YAPSSPYSASKASSDHLVRAWLRTYG-----LPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLY  228 (355)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhC-----CCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCc
Confidence            55678899999999999999888764     556667777766554321111111111 1     11       122357


Q ss_pred             hHHHHHHHHHHhc
Q 023054          227 VPQGAATTCYVAL  239 (288)
Q Consensus       227 ~~~~a~~~~~l~~  239 (288)
                      .+|++.++..++.
T Consensus       229 v~D~a~a~~~~~~  241 (355)
T PRK10217        229 VEDHARALYCVAT  241 (355)
T ss_pred             HHHHHHHHHHHHh
Confidence            7899999988885

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.79  E-value=1.4e-17  Score=145.22  Aligned_cols=217  Identities=16%  Similarity=0.139  Sum_probs=142.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+..................++.++.+|+++.+++..+++       ++|+|
T Consensus         8 lVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~V   80 (322)
T PLN02662          8 CVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------GCEGV   80 (322)
T ss_pred             EEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------CCCEE
Confidence            69999999999999999999999999998865433222211111112468899999999888777665       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc-ccccCCccccCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ-YTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~~~~~~~~  159 (288)
                      ||+|+.....   ..+.....+++|+.++.++++++.....        -.+||++||..+. ...........+++...
T Consensus        81 ih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~~--------~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~  149 (322)
T PLN02662         81 FHTASPFYHD---VTDPQAELIDPAVKGTLNVLRSCAKVPS--------VKRVVVTSSMAAVAYNGKPLTPDVVVDETWF  149 (322)
T ss_pred             EEeCCcccCC---CCChHHHHHHHHHHHHHHHHHHHHhCCC--------CCEEEEccCHHHhcCCCcCCCCCCcCCcccC
Confidence            9999875321   1122247899999999999999865321        2489999998653 21111000011222211


Q ss_pred             CCc------cccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-hH-HHHHHHHH--------Hhhh
Q 023054          160 YSD------KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-AV-VMRFLKFF--------SFFL  223 (288)
Q Consensus       160 ~~~------~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~~-~~~~~~~~--------~~~~  223 (288)
                      ..+      ...|+.+|.+.+.+++.++++.   +  ++++.+.|+.+.++..... .. .....+..        ....
T Consensus       150 ~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (322)
T PLN02662        150 SDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---G--IDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYR  224 (322)
T ss_pred             CChhHhhcccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcC
Confidence            111      2479999999888887776553   4  8899999999988864321 11 11111111        1123


Q ss_pred             cCChHHHHHHHHHHhcC
Q 023054          224 WKNVPQGAATTCYVALH  240 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~  240 (288)
                      +...+|+|++++.++..
T Consensus       225 ~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        225 WVDVRDVANAHIQAFEI  241 (322)
T ss_pred             eEEHHHHHHHHHHHhcC
Confidence            46789999999999863

>PRK06720 hypothetical protein; Provisional

Probab=99.79  E-value=5.8e-18  Score=133.30  Aligned_cols=138  Identities=15%  Similarity=0.171  Sum_probs=111.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||++|||+++++.|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++.++++++++++.+.++++|++
T Consensus        20 lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDil   97 (169)
T PRK06720         20 IVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLNAFSRIDML   97 (169)
T ss_pred             EEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999999988887777777643  3457788999999999999999999889999999


Q ss_pred             EEccccCCCCC---CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC--CCCCeEEEEcCccccc
Q 023054           81 INNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET--GIEGRIVNLSSIAHQY  143 (288)
Q Consensus        81 v~~ag~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~~~g~iv~vsS~~~~~  143 (288)
                      |||||+.....   +.+.++ +.  .+|+.+.+..++.+.+.|.++...-  ...||+..|||.+..+
T Consensus        98 VnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         98 FQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             EECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            99999865422   212222 23  7778888999999999988764322  3478999999977543

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.78  E-value=2.6e-17  Score=140.33  Aligned_cols=227  Identities=16%  Similarity=0.131  Sum_probs=148.7

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|.||++++++|.++|  ++|.+++++......  ..+..   .....++.+|++|.+++.++++       ++|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence            799999999999999999999  689998887654221  11111   1223489999999999988876       689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+|+......   ....++++++|+.|+-++++++...-         -.++|++||...............-++..
T Consensus        69 ~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~~---------VkrlVytSS~~vv~~~~~~~~~~~~dE~~  136 (280)
T PF01073_consen   69 VVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKAG---------VKRLVYTSSISVVFDNYKGDPIINGDEDT  136 (280)
T ss_pred             eEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEEcCcceeEeccCCCCcccCCcCC
Confidence            9999999764322   34567899999999999999887531         24899999998876422111111111222


Q ss_pred             CC--CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-hHHHHHHHH------HH----hhhcC
Q 023054          159 GY--SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-AVVMRFLKF------FS----FFLWK  225 (288)
Q Consensus       159 ~~--~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~------~~----~~~~~  225 (288)
                      .+  .....|+.||+..+.++......-...+..++.++|.|..|..|-.... +......+.      +.    ..-+.
T Consensus       137 ~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~v  216 (280)
T PF01073_consen  137 PYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFV  216 (280)
T ss_pred             cccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcE
Confidence            22  2556899999998888766544111123359999999999987753322 111111111      01    11133


Q ss_pred             ChHHHHHHHHHHhcC--CC--ccCCCceee
Q 023054          226 NVPQGAATTCYVALH--PN--LKGVTGKYF  251 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~--~~--~~~~tG~~~  251 (288)
                      ..+++|.+.+..+..  ..  ...+.|+.|
T Consensus       217 yV~NvA~ahvlA~~~L~~~~~~~~~~G~~y  246 (280)
T PF01073_consen  217 YVENVAHAHVLAAQALLEPGKPERVAGQAY  246 (280)
T ss_pred             eHHHHHHHHHHHHHHhccccccccCCCcEE
Confidence            578999998866531  12  356788744

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.77  E-value=5.5e-18  Score=149.02  Aligned_cols=220  Identities=13%  Similarity=0.048  Sum_probs=145.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHh--hCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAAN-EARQLILK--EDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~-~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||+|+||++++++|+++|++|++++|+..... ...+.+..  ...+.++.++.+|++|.+++.++++..     .+
T Consensus        10 lVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   84 (340)
T PLN02653         10 LITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-----KP   84 (340)
T ss_pred             EEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc-----CC
Confidence            69999999999999999999999999998754211 11121211  011345889999999999999888764     58


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |+|||+|+.....  ...+..+..+++|+.++.++++++.+.+.+..+    .-++|++||...+ +....    +.++.
T Consensus        85 d~Vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~----~~~~v~~Ss~~vy-g~~~~----~~~E~  153 (340)
T PLN02653         85 DEVYNLAAQSHVA--VSFEMPDYTADVVATGALRLLEAVRLHGQETGR----QIKYYQAGSSEMY-GSTPP----PQSET  153 (340)
T ss_pred             CEEEECCcccchh--hhhhChhHHHHHHHHHHHHHHHHHHHhcccccc----ceeEEEeccHHHh-CCCCC----CCCCC
Confidence            9999999975432  223445778899999999999999887643210    1278888886433 21111    23344


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccC-CceEEEEeeCCcccCCCCCCChHHHHHHHHH----------H----hh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEG-VNITANSVHPGLIMTNLFKHSAVVMRFLKFF----------S----FF  222 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~-~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~----------~----~~  222 (288)
                      ....+...|+.||.+.+.+++.++.+++..- ..+.+|.+.||...+.+..   ....+...+          .    .+
T Consensus       154 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~r  230 (340)
T PLN02653        154 TPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTR---KITRAVGRIKVGLQKKLFLGNLDASR  230 (340)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchh---HHHHHHHHHHcCCCCceEeCCCccee
Confidence            4455677899999999999999988876421 1144566667644321111   111111100          0    11


Q ss_pred             hcCChHHHHHHHHHHhc
Q 023054          223 LWKNVPQGAATTCYVAL  239 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~  239 (288)
                      -+...+|+|++++.++.
T Consensus       231 d~i~v~D~a~a~~~~~~  247 (340)
T PLN02653        231 DWGFAGDYVEAMWLMLQ  247 (340)
T ss_pred             cceeHHHHHHHHHHHHh
Confidence            22477899999999886

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.77  E-value=6.6e-17  Score=140.45  Aligned_cols=213  Identities=16%  Similarity=0.117  Sum_probs=143.3

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChH-HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      +||||+|+||.+++++|+++|  ++|++++|... ...+....+..   ..++.++.+|++|++++.++++..     ++
T Consensus         3 lItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (317)
T TIGR01181         3 LVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED---NPRYRFVKGDIGDRELVSRLFTEH-----QP   74 (317)
T ss_pred             EEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc---CCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence            699999999999999999987  68988876421 11111111211   235788999999999998887653     59


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |+|||+|+.....  .+.+.++..+++|+.++..+++++...+.        ..++|++||...+......   ....+.
T Consensus        75 d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--------~~~~i~~Ss~~v~g~~~~~---~~~~e~  141 (317)
T TIGR01181        75 DAVVHFAAESHVD--RSISGPAAFIETNVVGTYTLLEAVRKYWH--------EFRFHHISTDEVYGDLEKG---DAFTET  141 (317)
T ss_pred             CEEEEcccccCch--hhhhCHHHHHHHHHHHHHHHHHHHHhcCC--------CceEEEeeccceeCCCCCC---CCcCCC
Confidence            9999999975432  23355678899999999999988765432        2489999996543211110   012233


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh-------------hhc
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF-------------FLW  224 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-------------~~~  224 (288)
                      ....+...|+.+|.+.+.+++.++.+.   +  +++.++.|+.+..+..........+......             .-+
T Consensus       142 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (317)
T TIGR01181       142 TPLAPSSPYSASKAASDHLVRAYHRTY---G--LPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDW  216 (317)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEee
Confidence            334456789999999999999887764   3  7788899998876653322122222111111             112


Q ss_pred             CChHHHHHHHHHHhc
Q 023054          225 KNVPQGAATTCYVAL  239 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~  239 (288)
                      ...+|+++.+..++.
T Consensus       217 i~v~D~a~~~~~~~~  231 (317)
T TIGR01181       217 LYVEDHCRAIYLVLE  231 (317)
T ss_pred             EEHHHHHHHHHHHHc
Confidence            356899999999885

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.76  E-value=1.2e-17  Score=147.15  Aligned_cols=218  Identities=13%  Similarity=0.031  Sum_probs=141.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-----ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||+|+||++++++|+++|++|++++|+.+.     .+.+...+.. ..+.++.++.+|++|.+++.++++..     
T Consensus         4 lVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----   77 (343)
T TIGR01472         4 LITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHN-VNKARMKLHYGDLTDSSNLRRIIDEI-----   77 (343)
T ss_pred             EEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhcccc-ccccceeEEEeccCCHHHHHHHHHhC-----
Confidence            699999999999999999999999999987542     2111111101 01245889999999999998888764     


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ++|+|||+|+......  ..+.....+++|+.++.++++++.+.-.+.      ..++|++||...+.. ..   ..+.+
T Consensus        78 ~~d~ViH~Aa~~~~~~--~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~------~~~~v~~SS~~vyg~-~~---~~~~~  145 (343)
T TIGR01472        78 KPTEIYNLAAQSHVKV--SFEIPEYTADVDGIGTLRLLEAVRTLGLIK------SVKFYQASTSELYGK-VQ---EIPQN  145 (343)
T ss_pred             CCCEEEECCcccccch--hhhChHHHHHHHHHHHHHHHHHHHHhCCCc------CeeEEEeccHHhhCC-CC---CCCCC
Confidence            5899999999754321  223346678899999999999987642111      137999999764421 11   11234


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCc-eEEEEeeCCcccCCCCCCChHHHHHHHHH--------------H
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVN-ITANSVHPGLIMTNLFKHSAVVMRFLKFF--------------S  220 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~~~~~--------------~  220 (288)
                      +.....+...|+.||.+.+.+++.++++++..... +.+|...|+.-.. +...  ....+...+              .
T Consensus       146 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~g~g~~  222 (343)
T TIGR01472       146 ETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGEN-FVTR--KITRAAAKIKLGLQEKLYLGNLDA  222 (343)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc-ccch--HHHHHHHHHHcCCCCceeeCCCcc
Confidence            44455677899999999999999998887543211 2234555653221 1111  111111111              1


Q ss_pred             hhhcCChHHHHHHHHHHhc
Q 023054          221 FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       221 ~~~~~~~~~~a~~~~~l~~  239 (288)
                      .+-+...+|+|++++.++.
T Consensus       223 ~rd~i~V~D~a~a~~~~~~  241 (343)
T TIGR01472       223 KRDWGHAKDYVEAMWLMLQ  241 (343)
T ss_pred             ccCceeHHHHHHHHHHHHh
Confidence            1223478899999998885

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.75  E-value=5.9e-17  Score=143.23  Aligned_cols=216  Identities=16%  Similarity=0.114  Sum_probs=144.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+....+.+...+..   ..++.++.+|+++.+.+.++++       ++|+|
T Consensus        14 LVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~-------~~d~V   83 (353)
T PLN02896         14 CVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK-------GCDGV   83 (353)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc-------CCCEE
Confidence            6999999999999999999999999999987665554443321   3568899999999988877764       58999


Q ss_pred             EEccccCCCCCCCCCCcch-----hhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc-cCC
Q 023054           81 INNAGIMFCPYQISEDGIE-----MQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF-QKI  154 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~-----~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~-~~~  154 (288)
                      ||+|+........+.++.+     ..+++|+.++..+++++.+...        .++||++||.+.+...+....+ ..+
T Consensus        84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~--------~~~~v~~SS~~vyg~~~~~~~~~~~~  155 (353)
T PLN02896         84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKT--------VKRVVFTSSISTLTAKDSNGRWRAVV  155 (353)
T ss_pred             EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCC--------ccEEEEEechhhccccccCCCCCCcc
Confidence            9999976443211222223     3556667899999998875421        2489999998665422111000 112


Q ss_pred             CCCC---------CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-h-HHHHHHHHH----
Q 023054          155 NDRA---------GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-A-VVMRFLKFF----  219 (288)
Q Consensus       155 ~~~~---------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~-~~~~~~~~~----  219 (288)
                      ++..         ..++...|+.||.+.+.+++.+++++   +  +++.++.|+.+-.|..... + ........+    
T Consensus       156 ~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~  230 (353)
T PLN02896        156 DETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---G--IDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDS  230 (353)
T ss_pred             CcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCc
Confidence            2210         11233579999999999888877665   4  8899999988877754321 1 111111110    


Q ss_pred             H-------------hhhcCChHHHHHHHHHHhc
Q 023054          220 S-------------FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       220 ~-------------~~~~~~~~~~a~~~~~l~~  239 (288)
                      .             ..-+...+|+|++++.++.
T Consensus       231 ~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~  263 (353)
T PLN02896        231 KLFSILSAVNSRMGSIALVHIEDICDAHIFLME  263 (353)
T ss_pred             cccccccccccccCceeEEeHHHHHHHHHHHHh
Confidence            0             0124578999999999985

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=1e-16  Score=131.93  Aligned_cols=223  Identities=16%  Similarity=0.174  Sum_probs=155.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeC-----ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAAR-----NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |||||+|.||.++++++.++..  +|+.++.     +.+.+.    .+..   ..+..|++.|+.|.+.+.+++.+.   
T Consensus         4 LVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~----~~~~---~~~~~fv~~DI~D~~~v~~~~~~~---   73 (340)
T COG1088           4 LVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA----DVED---SPRYRFVQGDICDRELVDRLFKEY---   73 (340)
T ss_pred             EEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH----hhhc---CCCceEEeccccCHHHHHHHHHhc---
Confidence            6999999999999999998765  4666654     222222    2221   468999999999999999988865   


Q ss_pred             CCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc-
Q 023054           74 NLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ-  152 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~-  152 (288)
                        .+|+|||.|+-..-  +-+.++....+++|+.|++.|+.++..+..+        .|++.||+-.-+    +++... 
T Consensus        74 --~~D~VvhfAAESHV--DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~--------frf~HISTDEVY----G~l~~~~  137 (340)
T COG1088          74 --QPDAVVHFAAESHV--DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK--------FRFHHISTDEVY----GDLGLDD  137 (340)
T ss_pred             --CCCeEEEechhccc--cccccChhhhhhcchHHHHHHHHHHHHhccc--------ceEEEecccccc----ccccCCC
Confidence              79999999986654  3355677889999999999999999988743        489999996543    233332 


Q ss_pred             -CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHH-HHHHH-----H-----
Q 023054          153 -KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR-FLKFF-----S-----  220 (288)
Q Consensus       153 -~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~-~~~~~-----~-----  220 (288)
                       .+.+...+.+.++|++||++-..|++++.+.++..     ++...+----.|......+... +...+     |     
T Consensus       138 ~~FtE~tp~~PsSPYSASKAasD~lVray~~TYglp-----~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG  212 (340)
T COG1088         138 DAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLP-----ATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDG  212 (340)
T ss_pred             CCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCCc-----eEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCC
Confidence             57788899999999999999999999999998854     3333333333333221111111 11111     0     


Q ss_pred             --hhhcCChHHHHHHHHHHhcCCCccCCCceeeccCccCC
Q 023054          221 --FFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDCNEMP  258 (288)
Q Consensus       221 --~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~~~~~  258 (288)
                        -+-|.-.+|=+.++-..+..    ..-|+.++.++...
T Consensus       213 ~~iRDWl~VeDh~~ai~~Vl~k----g~~GE~YNIgg~~E  248 (340)
T COG1088         213 LQIRDWLYVEDHCRAIDLVLTK----GKIGETYNIGGGNE  248 (340)
T ss_pred             cceeeeEEeHhHHHHHHHHHhc----CcCCceEEeCCCcc
Confidence              12233566888888888852    23388777665543

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.75  E-value=3e-16  Score=138.61  Aligned_cols=223  Identities=13%  Similarity=0.102  Sum_probs=142.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCCh--HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNM--AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||+|+||++++++|+++|++ |+.+++..  ...+...    ...++.++.++.+|++|.+++.++++..     ++
T Consensus         4 lITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          4 LVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA----DVSDSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             EEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH----hcccCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999976 55555432  1111111    1112346788999999999998888752     69


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccccccc--CCc----cc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYK--GGI----RF  151 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~--~~~----~~  151 (288)
                      |+|||+|+.....  ...+..++.+++|+.++.++++++.++|...........++|++||...+....  ...    ..
T Consensus        75 d~vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~  152 (352)
T PRK10084         75 DAVMHLAAESHVD--RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEEL  152 (352)
T ss_pred             CEEEECCcccCCc--chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccC
Confidence            9999999975332  122445789999999999999999887642110000024899999875432110  000    00


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHH------H-----
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF------S-----  220 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~------~-----  220 (288)
                      ..+.+...+.+...|+.||.+.+.+++.++++++     +.+..+.|+.+..+..........+....      +     
T Consensus       153 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g-----~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g  227 (352)
T PRK10084        153 PLFTETTAYAPSSPYSASKASSDHLVRAWLRTYG-----LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (352)
T ss_pred             CCccccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCC
Confidence            1133444556678899999999999999888764     44555666666554321111111111111      1     


Q ss_pred             --hhhcCChHHHHHHHHHHhc
Q 023054          221 --FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       221 --~~~~~~~~~~a~~~~~l~~  239 (288)
                        .+-+...+|++.+++.++.
T Consensus       228 ~~~~~~v~v~D~a~a~~~~l~  248 (352)
T PRK10084        228 DQIRDWLYVEDHARALYKVVT  248 (352)
T ss_pred             CeEEeeEEHHHHHHHHHHHHh
Confidence              1123467899999988885

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.74  E-value=6.6e-17  Score=142.09  Aligned_cols=216  Identities=15%  Similarity=0.098  Sum_probs=141.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|+++.|+......... +.......++.++.+|++|.+++.++++       ++|+|
T Consensus        13 lItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   84 (338)
T PLN00198         13 CVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA-------GCDLV   84 (338)
T ss_pred             EEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh-------cCCEE
Confidence            699999999999999999999999988887644332211 1111001358899999999988777664       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC---C--ccccCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG---G--IRFQKIN  155 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~---~--~~~~~~~  155 (288)
                      ||+|+....   ...+.....+++|+.++..+++++.+..   .     .++||++||.+.+...+.   .  ...+...
T Consensus        85 ih~A~~~~~---~~~~~~~~~~~~nv~g~~~ll~a~~~~~---~-----~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~  153 (338)
T PLN00198         85 FHVATPVNF---ASEDPENDMIKPAIQGVHNVLKACAKAK---S-----VKRVILTSSAAAVSINKLSGTGLVMNEKNWT  153 (338)
T ss_pred             EEeCCCCcc---CCCChHHHHHHHHHHHHHHHHHHHHhcC---C-----ccEEEEeecceeeeccCCCCCCceeccccCC
Confidence            999985321   1123345678999999999999986642   1     258999999865532110   0  0111000


Q ss_pred             C----CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC-Ch-HH---HHHHH--HH-----
Q 023054          156 D----RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH-SA-VV---MRFLK--FF-----  219 (288)
Q Consensus       156 ~----~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~-~~-~~---~~~~~--~~-----  219 (288)
                      .    ....++...|+.||.+.+.+++.+++++   +  +.++.+.|+.+-.|-... .+ ..   .....  .+     
T Consensus       154 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (338)
T PLN00198        154 DVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---N--IDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGL  228 (338)
T ss_pred             chhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---C--ceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccc
Confidence            0    0113456779999999999888877663   4  888899999987774221 10 00   00000  00     


Q ss_pred             ---H----hhhcCChHHHHHHHHHHhcC
Q 023054          220 ---S----FFLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       220 ---~----~~~~~~~~~~a~~~~~l~~~  240 (288)
                         +    ..-+...+|++++++.++..
T Consensus       229 ~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        229 KGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             cccccccCCcceeEHHHHHHHHHHHhhC
Confidence               0    12346788999999999863

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.74  E-value=8.7e-17  Score=145.67  Aligned_cols=186  Identities=17%  Similarity=0.160  Sum_probs=125.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH---H----H---------HHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA---A----A---------NEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~---~----~---------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |||||+|+||++++++|+++|++|+++++...   .    .         .+....+... .+.++.++.+|++|.+.+.
T Consensus        51 LVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~Dl~d~~~v~  129 (442)
T PLN02572         51 MVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVGDICDFEFLS  129 (442)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEECCCCCHHHHH
Confidence            69999999999999999999999999874211   0    0         0011111111 1246889999999999998


Q ss_pred             HHHHHHHhcCCCcceEEEccccCCCCC-CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           65 DFAQNFIALNLPLNILINNAGIMFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                      ++++..     ++|+|||+|+...... ..++++++..+++|+.+++++++++...-.        ..++|++||...+.
T Consensus       130 ~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv--------~~~~V~~SS~~vYG  196 (442)
T PLN02572        130 EAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP--------DCHLVKLGTMGEYG  196 (442)
T ss_pred             HHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC--------CccEEEEecceecC
Confidence            888763     6999999997643322 233445667789999999999998865321        13799999986543


Q ss_pred             cccCCccccCCC------CC---CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          144 TYKGGIRFQKIN------DR---AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       144 ~~~~~~~~~~~~------~~---~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                      ..........++      +.   ....+...|+.||.+.+.+++.+++.+   +  +.+.++.|+.+-.+.
T Consensus       197 ~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---g--l~~v~lR~~~vyGp~  262 (442)
T PLN02572        197 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVVYGVR  262 (442)
T ss_pred             CCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---C--CCEEEEecccccCCC
Confidence            211111111110      01   123345689999999988888777664   4  788888888887664

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.73  E-value=1.9e-17  Score=138.83  Aligned_cols=212  Identities=15%  Similarity=0.142  Sum_probs=146.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceE----EEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVD----TLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||+|-||+++|++|++.+. +|+++++++..+-....++...++..++.    .+-+|+.|.+.+.+++++.     
T Consensus         2 LVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~-----   76 (293)
T PF02719_consen    2 LVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY-----   76 (293)
T ss_dssp             EEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-------
T ss_pred             EEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-----
Confidence            6999999999999999999885 79999999999999999887666555554    3478999999888888755     


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ++|+|+|.|+.-.-+  .-++...+.+++|+.|+.++++++..+-.         .++|++|+--+.             
T Consensus        77 ~pdiVfHaAA~KhVp--l~E~~p~eav~tNv~GT~nv~~aa~~~~v---------~~~v~ISTDKAv-------------  132 (293)
T PF02719_consen   77 KPDIVFHAAALKHVP--LMEDNPFEAVKTNVLGTQNVAEAAIEHGV---------ERFVFISTDKAV-------------  132 (293)
T ss_dssp             T-SEEEE------HH--HHCCCHHHHHHHHCHHHHHHHHHHHHTT----------SEEEEEEECGCS-------------
T ss_pred             CCCEEEEChhcCCCC--hHHhCHHHHHHHHHHHHHHHHHHHHHcCC---------CEEEEccccccC-------------
Confidence            899999999975432  23356789999999999999999987532         389999997653             


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHH---------HHhhhcCC
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF---------FSFFLWKN  226 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~  226 (288)
                           .+...||+||...+.++.+++...+..+  .++.+|.-|-|-.--..-.+.+....+.         -..+++.+
T Consensus       133 -----~PtnvmGatKrlaE~l~~~~~~~~~~~~--t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmt  205 (293)
T PF02719_consen  133 -----NPTNVMGATKRLAEKLVQAANQYSGNSD--TKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMT  205 (293)
T ss_dssp             -----S--SHHHHHHHHHHHHHHHHCCTSSSS----EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHhhhCCCCC--cEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEec
Confidence                 4678899999999999999888876666  8899999988854322222222222221         11355668


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeec
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      +++.++.++..+..    ...|..|.
T Consensus       206 i~EAv~Lvl~a~~~----~~~geifv  227 (293)
T PF02719_consen  206 IEEAVQLVLQAAAL----AKGGEIFV  227 (293)
T ss_dssp             HHHHHHHHHHHHHH------TTEEEE
T ss_pred             HHHHHHHHHHHHhh----CCCCcEEE
Confidence            89999999988852    22466554

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.71  E-value=8.2e-16  Score=127.97  Aligned_cols=217  Identities=17%  Similarity=0.162  Sum_probs=153.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||.+++++|.++|+.|+.+.|+..........       .++.++.+|+.|.+.++.+++..     .+|.|
T Consensus         2 lI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~v   69 (236)
T PF01370_consen    2 LITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA-----NIDVV   69 (236)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-----TESEE
T ss_pred             EEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-----CceEE
Confidence            6999999999999999999999988888876554332221       26899999999999999999876     79999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+.....  .+.+.....++.|+.+...+++.+...-         ..++|++||...+.. .   ...++++....
T Consensus        70 i~~a~~~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~i~~sS~~~y~~-~---~~~~~~e~~~~  134 (236)
T PF01370_consen   70 IHLAAFSSNP--ESFEDPEEIIEANVQGTRNLLEAAREAG---------VKRFIFLSSASVYGD-P---DGEPIDEDSPI  134 (236)
T ss_dssp             EEEBSSSSHH--HHHHSHHHHHHHHHHHHHHHHHHHHHHT---------TSEEEEEEEGGGGTS-S---SSSSBETTSGC
T ss_pred             EEeecccccc--cccccccccccccccccccccccccccc---------ccccccccccccccc-c---ccccccccccc
Confidence            9999975311  1224567788888888888887776432         248999999544322 1   22234444445


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC---CCCChHHHHHHHHHHh-------------hhc
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL---FKHSAVVMRFLKFFSF-------------FLW  224 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~---~~~~~~~~~~~~~~~~-------------~~~  224 (288)
                      .+...|+.+|...+.+.+.+.++.   +  +++..+.|+.+-.+.   .........+......             .-+
T Consensus       135 ~~~~~Y~~~K~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (236)
T PF01370_consen  135 NPLSPYGASKRAAEELLRDYAKKY---G--LRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDF  209 (236)
T ss_dssp             CHSSHHHHHHHHHHHHHHHHHHHH---T--SEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEE
T ss_pred             cccccccccccccccccccccccc---c--cccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccce
Confidence            677779999999999998888776   4  889999999998777   2222233333333221             111


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      ...+|+|+.+++++.++.   ..|..|+
T Consensus       210 i~v~D~a~~~~~~~~~~~---~~~~~yN  234 (236)
T PF01370_consen  210 IHVDDLAEAIVAALENPK---AAGGIYN  234 (236)
T ss_dssp             EEHHHHHHHHHHHHHHSC---TTTEEEE
T ss_pred             EEHHHHHHHHHHHHhCCC---CCCCEEE
Confidence            256699999999997543   3444443

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.70  E-value=1.4e-15  Score=134.06  Aligned_cols=212  Identities=13%  Similarity=0.034  Sum_probs=139.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC---CCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED---DTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||+|.||.+++++|.++|++|++++|...........+....   ...++.++.+|+.|.+.+..+++       .+
T Consensus        19 lVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-------~~   91 (348)
T PRK15181         19 LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-------NV   91 (348)
T ss_pred             EEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-------CC
Confidence            699999999999999999999999999986543222222221111   12358889999999887776664       58


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |+|||.|+......  ..++....+++|+.++.++++++...    +     -.++|++||...+...+ .   .++.+.
T Consensus        92 d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~~----~-----~~~~v~~SS~~vyg~~~-~---~~~~e~  156 (348)
T PRK15181         92 DYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARDA----H-----VSSFTYAASSSTYGDHP-D---LPKIEE  156 (348)
T ss_pred             CEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHc----C-----CCeEEEeechHhhCCCC-C---CCCCCC
Confidence            99999999754322  22345678999999999999887532    1     24899999975442211 1   111222


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHH-------------
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFS-------------  220 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~-------------  220 (288)
                      ....+...|+.+|.+.+.+++.++.+.   +  +++..+.|+.+-.|-....    .....+.....             
T Consensus       157 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~  231 (348)
T PRK15181        157 RIGRPLSPYAVTKYVNELYADVFARSY---E--FNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGST  231 (348)
T ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCc
Confidence            223455689999999999888776554   4  7888899988877643211    11112111110             


Q ss_pred             hhhcCChHHHHHHHHHHhc
Q 023054          221 FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       221 ~~~~~~~~~~a~~~~~l~~  239 (288)
                      .+-+...+|+|+.++.++.
T Consensus       232 ~rd~i~v~D~a~a~~~~~~  250 (348)
T PRK15181        232 SRDFCYIENVIQANLLSAT  250 (348)
T ss_pred             eEeeEEHHHHHHHHHHHHh
Confidence            1122357799999988774

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.70  E-value=2e-16  Score=130.81  Aligned_cols=160  Identities=19%  Similarity=0.172  Sum_probs=126.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|-||+++|.+|++.|++|++++.-.....+.....       ...+++.|+.|.+.+.+++++.     +||.|
T Consensus         4 LVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~idaV   71 (329)
T COG1087           4 LVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KIDAV   71 (329)
T ss_pred             EEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999999999998654444444322       1679999999999999988865     89999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||.||...-.+  +.+...+.++.|+.+++.|++++...-.         .+||| ||+++.++.|..   -++.+....
T Consensus        72 iHFAa~~~VgE--Sv~~Pl~Yy~NNv~gTl~Ll~am~~~gv---------~~~vF-SStAavYG~p~~---~PI~E~~~~  136 (329)
T COG1087          72 VHFAASISVGE--SVQNPLKYYDNNVVGTLNLIEAMLQTGV---------KKFIF-SSTAAVYGEPTT---SPISETSPL  136 (329)
T ss_pred             EECccccccch--hhhCHHHHHhhchHhHHHHHHHHHHhCC---------CEEEE-ecchhhcCCCCC---cccCCCCCC
Confidence            99999765443  4567789999999999999998866532         24555 455555543333   466777777


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhccc
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEE  187 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~  187 (288)
                      .+..+||.||.+.+.+.+.+++...-+
T Consensus       137 ~p~NPYG~sKlm~E~iL~d~~~a~~~~  163 (329)
T COG1087         137 APINPYGRSKLMSEEILRDAAKANPFK  163 (329)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHhCCCc
Confidence            788999999999999999999887744

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.70  E-value=1.7e-15  Score=132.25  Aligned_cols=203  Identities=19%  Similarity=0.129  Sum_probs=138.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||+|+||+++++.|+++|++|++++|+.+.....    .    ...+.++.+|++|.+++.++++       .+|+|
T Consensus         4 lItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~----~~~~~~~~~D~~~~~~l~~~~~-------~~d~v   68 (328)
T TIGR03466         4 LVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E----GLDVEIVEGDLRDPASLRKAVA-------GCRAL   68 (328)
T ss_pred             EEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c----cCCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            6999999999999999999999999999986543211    1    2358889999999988877664       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+....    ..++++..+++|+.++..+++++...    .     -+++|++||...+...+..   .++++....
T Consensus        69 i~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~SS~~~~~~~~~~---~~~~e~~~~  132 (328)
T TIGR03466        69 FHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALEA----G-----VERVVYTSSVATLGVRGDG---TPADETTPS  132 (328)
T ss_pred             EEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHHh----C-----CCeEEEEechhhcCcCCCC---CCcCccCCC
Confidence            999985421    23456788999999999998887542    1     3589999998765321111   122222222


Q ss_pred             C---ccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHH-HH----HH-----hhhcCCh
Q 023054          161 S---DKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFL-KF----FS-----FFLWKNV  227 (288)
Q Consensus       161 ~---~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~-~~----~~-----~~~~~~~  227 (288)
                      .   ....|+.+|.+.+.+++.++.+.   +  +++..+.|+.+..+............ ..    .+     ...+...
T Consensus       133 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  207 (328)
T TIGR03466       133 SLDDMIGHYKRSKFLAEQAALEMAAEK---G--LPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHV  207 (328)
T ss_pred             CcccccChHHHHHHHHHHHHHHHHHhc---C--CCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEH
Confidence            1   23579999999999988877653   4  78888999888665432111111111 11    01     0113468


Q ss_pred             HHHHHHHHHHhc
Q 023054          228 PQGAATTCYVAL  239 (288)
Q Consensus       228 ~~~a~~~~~l~~  239 (288)
                      +|+|+.++.++.
T Consensus       208 ~D~a~a~~~~~~  219 (328)
T TIGR03466       208 DDVAEGHLLALE  219 (328)
T ss_pred             HHHHHHHHHHHh
Confidence            899999998885

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.70  E-value=1.4e-15  Score=135.80  Aligned_cols=212  Identities=13%  Similarity=0.135  Sum_probs=168.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|-||+++|+++++.+. ++++.+|++.+......+++..+|..++.++-+|+.|.+.+.++++..     ++|+
T Consensus       254 LVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-----kvd~  328 (588)
T COG1086         254 LVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-----KVDI  328 (588)
T ss_pred             EEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-----CCce
Confidence            6999999999999999999886 699999999999999999999888888999999999999999998865     7999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |+|.|+.-.-+  .-+..+.+.+++|+.|+.++++++...-.+         ++|.+|+--+.                 
T Consensus       329 VfHAAA~KHVP--l~E~nP~Eai~tNV~GT~nv~~aa~~~~V~---------~~V~iSTDKAV-----------------  380 (588)
T COG1086         329 VFHAAALKHVP--LVEYNPEEAIKTNVLGTENVAEAAIKNGVK---------KFVLISTDKAV-----------------  380 (588)
T ss_pred             EEEhhhhccCc--chhcCHHHHHHHhhHhHHHHHHHHHHhCCC---------EEEEEecCccc-----------------
Confidence            99999975432  234567899999999999999999776533         89999997654                 


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHH---------HHhhhcCChHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF---------FSFFLWKNVPQG  230 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~  230 (288)
                       .+...||+||...+.++.+++.+....+  -++.+|.-|-|-.--..-.+.+.+..+.         -..+++.+.+|.
T Consensus       381 -~PtNvmGaTKr~aE~~~~a~~~~~~~~~--T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EA  457 (588)
T COG1086         381 -NPTNVMGATKRLAEKLFQAANRNVSGTG--TRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEA  457 (588)
T ss_pred             -CCchHhhHHHHHHHHHHHHHhhccCCCC--cEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHH
Confidence             4678899999999999999988777655  7899999998866544433443333322         123556677888


Q ss_pred             HHHHHHHhcCCCccCCCceeec
Q 023054          231 AATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      ++.++....    ....|..|.
T Consensus       458 v~LVlqA~a----~~~gGeifv  475 (588)
T COG1086         458 VQLVLQAGA----IAKGGEIFV  475 (588)
T ss_pred             HHHHHHHHh----hcCCCcEEE
Confidence            888888874    233466553

>PLN02240 UDP-glucose 4-epimerase

Probab=99.69  E-value=8.2e-16  Score=135.82  Aligned_cols=175  Identities=17%  Similarity=0.112  Sum_probs=121.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC--CCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED--DTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++|++|++++|...........+....  ...++.++.+|++|.+++.++++..     ++|
T Consensus         9 lItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-----~~d   83 (352)
T PLN02240          9 LVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-----RFD   83 (352)
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-----CCC
Confidence            699999999999999999999999999875432222111221110  1346888999999999998887652     799


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+|+.....  .+.+++...+++|+.++..+++++..    .+     ..++|++||...+ +..   ....+++..
T Consensus        84 ~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-----~~~~v~~Ss~~vy-g~~---~~~~~~E~~  148 (352)
T PLN02240         84 AVIHFAGLKAVG--ESVAKPLLYYDNNLVGTINLLEVMAK----HG-----CKKLVFSSSATVY-GQP---EEVPCTEEF  148 (352)
T ss_pred             EEEEccccCCcc--ccccCHHHHHHHHHHHHHHHHHHHHH----cC-----CCEEEEEccHHHh-CCC---CCCCCCCCC
Confidence            999999975322  23356788999999999999886532    21     2489999996433 211   112344444


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPG  199 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG  199 (288)
                      ...+...|+.+|.+.+.+++.++.+.  .+  +.+..+.|+
T Consensus       149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~~~R~~  185 (352)
T PLN02240        149 PLSATNPYGRTKLFIEEICRDIHASD--PE--WKIILLRYF  185 (352)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHhc--CC--CCEEEEeec
Confidence            55567889999999999988877552  13  555555543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.69  E-value=8.8e-16  Score=129.33  Aligned_cols=201  Identities=15%  Similarity=0.112  Sum_probs=125.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-HHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-ASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++|++|+++.|+.+.......    .  ..++.++.+|+++. +++   .+.+.   .++|+
T Consensus        21 lItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~Dl~d~~~~l---~~~~~---~~~d~   88 (251)
T PLN00141         21 FVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q--DPSLQIVRADVTEGSDKL---VEAIG---DDSDA   88 (251)
T ss_pred             EEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c--CCceEEEEeeCCCCHHHH---HHHhh---cCCCE
Confidence            689999999999999999999999999999876543221    1  23688999999983 322   22221   26999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ||+|+|.....   +   ....+++|+.+...+++++.    +.+     .++||++||...+....            +
T Consensus        89 vi~~~g~~~~~---~---~~~~~~~n~~~~~~ll~a~~----~~~-----~~~iV~iSS~~v~g~~~------------~  141 (251)
T PLN00141         89 VICATGFRRSF---D---PFAPWKVDNFGTVNLVEACR----KAG-----VTRFILVSSILVNGAAM------------G  141 (251)
T ss_pred             EEECCCCCcCC---C---CCCceeeehHHHHHHHHHHH----HcC-----CCEEEEEccccccCCCc------------c
Confidence            99999864321   1   12235788888888888864    222     46999999986431100            1


Q ss_pred             CCccccchhhHHHHHHH-HHHHHHH-hcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          160 YSDKKAYGQSKLANILH-ANELSRR-FQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~-~~~la~~-~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                      .+....|...|.....+ .+..+.+ +...+  +++++|.||++.++.........  ........+.+++|+|+.++.+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g--i~~~iirpg~~~~~~~~~~~~~~--~~~~~~~~~i~~~dvA~~~~~~  217 (251)
T PLN00141        142 QILNPAYIFLNLFGLTLVAKLQAEKYIRKSG--INYTIVRPGGLTNDPPTGNIVME--PEDTLYEGSISRDQVAEVAVEA  217 (251)
T ss_pred             cccCcchhHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECCCccCCCCCceEEEC--CCCccccCcccHHHHHHHHHHH
Confidence            11223455555433322 2322322 34556  99999999999776432110000  0000112346899999999999


Q ss_pred             hcCCCcc
Q 023054          238 ALHPNLK  244 (288)
Q Consensus       238 ~~~~~~~  244 (288)
                      +..+...
T Consensus       218 ~~~~~~~  224 (251)
T PLN00141        218 LLCPESS  224 (251)
T ss_pred             hcChhhc
Confidence            9754433

>PLN02686 cinnamoyl-CoA reductase

Probab=99.68  E-value=5.2e-15  Score=131.32  Aligned_cols=216  Identities=15%  Similarity=0.090  Sum_probs=140.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC----CCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED----DTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||+|+||+++++.|+++|++|+++.|+.+..+.+. .+....    ....+.++.+|++|.+++.++++       +
T Consensus        57 LVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-------~  128 (367)
T PLN02686         57 CVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-------G  128 (367)
T ss_pred             EEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHHH-------h
Confidence            69999999999999999999999999888876654432 221110    01257889999999998888776       4


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc-cccc--cCC----c
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH-QYTY--KGG----I  149 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~-~~~~--~~~----~  149 (288)
                      +|.++|.|+.......  ........++|+.++..+++++...-   .     -.++|++||..+ .+..  +..    +
T Consensus       129 ~d~V~hlA~~~~~~~~--~~~~~~~~~~nv~gt~~llea~~~~~---~-----v~r~V~~SS~~~~vyg~~~~~~~~~~i  198 (367)
T PLN02686        129 CAGVFHTSAFVDPAGL--SGYTKSMAELEAKASENVIEACVRTE---S-----VRKCVFTSSLLACVWRQNYPHDLPPVI  198 (367)
T ss_pred             ccEEEecCeeeccccc--ccccchhhhhhHHHHHHHHHHHHhcC---C-----ccEEEEeccHHHhcccccCCCCCCccc
Confidence            6899999987533211  01123456788899999888875421   1     238999999753 2211  111    1


Q ss_pred             cccCCC-CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHHHHH-H---HHH--
Q 023054          150 RFQKIN-DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVMRFL-K---FFS--  220 (288)
Q Consensus       150 ~~~~~~-~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~-~---~~~--  220 (288)
                      +..... ......+...|+.||.+.+.+++.++++   .+  ++++++.|+.+.+|.....  ....... .   .+.  
T Consensus       199 ~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g--l~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g  273 (367)
T PLN02686        199 DEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KG--LKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADG  273 (367)
T ss_pred             CCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cC--ceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCC
Confidence            111100 0111224457999999999999887765   35  9999999999988853211  0111111 0   011  


Q ss_pred             hhhcCChHHHHHHHHHHhc
Q 023054          221 FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       221 ~~~~~~~~~~a~~~~~l~~  239 (288)
                      ...+...+|++++++.++.
T Consensus       274 ~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        274 LLATADVERLAEAHVCVYE  292 (367)
T ss_pred             CcCeEEHHHHHHHHHHHHh
Confidence            1124578999999999885

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.68  E-value=1.2e-15  Score=133.96  Aligned_cols=175  Identities=15%  Similarity=0.096  Sum_probs=118.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||+++++.|+++|++|++++|...........+... ++.++.++.+|++|.+++..+++.     .++|+|
T Consensus         4 lVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~v   77 (338)
T PRK10675          4 LVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALLTEILHD-----HAIDTV   77 (338)
T ss_pred             EEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHHHHHHHhc-----CCCCEE
Confidence            69999999999999999999999999876533322222222221 134578889999999988887753     369999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+......  ..+.....+++|+.++..+++++..    .+     -.+||++||...+.. ..   ..++++....
T Consensus        78 vh~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~----~~-----~~~~v~~Ss~~~yg~-~~---~~~~~E~~~~  142 (338)
T PRK10675         78 IHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAMRA----AN-----VKNLIFSSSATVYGD-QP---KIPYVESFPT  142 (338)
T ss_pred             EECCccccccc--hhhCHHHHHHHHHHHHHHHHHHHHH----cC-----CCEEEEeccHHhhCC-CC---CCccccccCC
Confidence            99999754321  2234567889999999998876543    22     358999999754321 11   1122222222


Q ss_pred             -CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCc
Q 023054          161 -SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGL  200 (288)
Q Consensus       161 -~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~  200 (288)
                       .+...|+.+|.+.+.+++.++++..  +  +++..+.|+.
T Consensus       143 ~~p~~~Y~~sK~~~E~~~~~~~~~~~--~--~~~~ilR~~~  179 (338)
T PRK10675        143 GTPQSPYGKSKLMVEQILTDLQKAQP--D--WSIALLRYFN  179 (338)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHhcC--C--CcEEEEEeee
Confidence             3467899999999999998876542  2  4555555433

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.68  E-value=8.6e-15  Score=129.62  Aligned_cols=225  Identities=19%  Similarity=0.179  Sum_probs=139.0

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHH---HHHHHHHHhhC---C--C-CceEEEEecCCChH------HH
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAA---NEARQLILKED---D--T-ARVDTLKLDLSSIA------SI   63 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~---~~~~~~~~~~~---~--~-~~~~~~~~Dl~~~~------~~   63 (288)
                      |||||||+||++++++|+++|  ++|+++.|+.+..   +++.+.+....   .  . .++.++.+|++++.      ..
T Consensus         3 lvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~   82 (367)
T TIGR01746         3 LLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEW   82 (367)
T ss_pred             EEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHH
Confidence            699999999999999999999  7899999976532   22222222110   0  1 47899999998653      22


Q ss_pred             HHHHHHHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           64 KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        64 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                      ..+.       ..+|+|||||+.....     ..++..+.+|+.++..+++.+...    .     ..+++++||.....
T Consensus        83 ~~~~-------~~~d~vih~a~~~~~~-----~~~~~~~~~nv~g~~~ll~~a~~~----~-----~~~~v~iSS~~v~~  141 (367)
T TIGR01746        83 ERLA-------ENVDTIVHNGALVNWV-----YPYSELRAANVLGTREVLRLAASG----R-----AKPLHYVSTISVLA  141 (367)
T ss_pred             HHHH-------hhCCEEEeCCcEeccC-----CcHHHHhhhhhHHHHHHHHHHhhC----C-----CceEEEEccccccC
Confidence            2222       3689999999976421     335677889999999988876532    1     23599999987653


Q ss_pred             cccCC-ccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC----ChHHHHHHHH
Q 023054          144 TYKGG-IRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH----SAVVMRFLKF  218 (288)
Q Consensus       144 ~~~~~-~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~----~~~~~~~~~~  218 (288)
                      ..... .................|+.+|.+.+.+++.++.    .+  ++++.+.||.+.++....    ..........
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~  215 (367)
T TIGR01746       142 AIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RG--LPVTIVRPGRILGNSYTGAINSSDILWRMVKG  215 (367)
T ss_pred             CcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cC--CCEEEECCCceeecCCCCCCCchhHHHHHHHH
Confidence            21110 0000000001112345799999998888776543    36  999999999998752211    1111111111


Q ss_pred             ------HH-----hhhcCChHHHHHHHHHHhcCCCccCCCceeecc
Q 023054          219 ------FS-----FFLWKNVPQGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       219 ------~~-----~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                            .+     ..-+.+.+++++.+++++..+ ....+|..|..
T Consensus       216 ~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~-~~~~~~~~~~v  260 (367)
T TIGR01746       216 CLALGAYPDSPELTEDLTPVDYVARAIVALSSQP-AASAGGPVFHV  260 (367)
T ss_pred             HHHhCCCCCCCccccCcccHHHHHHHHHHHHhCC-CcccCCceEEe
Confidence                  11     112457789999999998633 22233555543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.65  E-value=5.1e-15  Score=129.16  Aligned_cols=177  Identities=19%  Similarity=0.169  Sum_probs=125.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||+++++.|.++|++|++++|...........+...   .++.++.+|+++.+++.++++.     .++|+|
T Consensus         3 lV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   74 (328)
T TIGR01179         3 LVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEE-----HKIDAV   74 (328)
T ss_pred             EEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence            69999999999999999999999998876443322222222211   2578889999999999888763     379999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||......  ......+.+..|+.++..+++++...    +     ..++|++||...+ +....   ..+.+....
T Consensus        75 v~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~ss~~~~-g~~~~---~~~~e~~~~  139 (328)
T TIGR01179        75 IHFAGLIAVGE--SVQDPLKYYRNNVVNTLNLLEAMQQT----G-----VKKFIFSSSAAVY-GEPSS---IPISEDSPL  139 (328)
T ss_pred             EECccccCcch--hhcCchhhhhhhHHHHHHHHHHHHhc----C-----CCEEEEecchhhc-CCCCC---CCccccCCC
Confidence            99999764322  23445678899999999998875432    1     3589999886543 21111   122333334


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN  204 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~  204 (288)
                      .+...|+.+|.+.+.+++.++++.  .+  +++..+.|+.+..+
T Consensus       140 ~~~~~y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~g~  179 (328)
T TIGR01179       140 GPINPYGRSKLMSERILRDLSKAD--PG--LSYVILRYFNVAGA  179 (328)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHhc--cC--CCEEEEecCcccCC
Confidence            456789999999999999887652  24  78888998777665

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.64  E-value=8.3e-14  Score=122.88  Aligned_cols=222  Identities=11%  Similarity=0.017  Sum_probs=137.9

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCC-ChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS-SIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|.||+++++.|+++ |++|++++|+........       +...+.++.+|++ +.+.+.++++       ++|
T Consensus         5 lVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~-------~~d   70 (347)
T PRK11908          5 LILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV-------NHPRMHFFEGDITINKEWIEYHVK-------KCD   70 (347)
T ss_pred             EEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc-------cCCCeEEEeCCCCCCHHHHHHHHc-------CCC
Confidence            69999999999999999986 699999998764332211       1245889999998 5565554433       589


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCC-ccccC--CC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGG-IRFQK--IN  155 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~~~~--~~  155 (288)
                      +|||+|+...+..  ..++.+..+++|+.++.++++++...          +.++|++||...+...... ...+.  +.
T Consensus        71 ~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~~----------~~~~v~~SS~~vyg~~~~~~~~ee~~~~~  138 (347)
T PRK11908         71 VILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVKY----------GKHLVFPSTSEVYGMCPDEEFDPEASPLV  138 (347)
T ss_pred             EEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHhc----------CCeEEEEecceeeccCCCcCcCccccccc
Confidence            9999999754321  22345678899999999988877532          2389999997543211111 01010  00


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC--------ChHHHHHHHHH--------
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH--------SAVVMRFLKFF--------  219 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~--------  219 (288)
                      ......+...|+.+|.+.+.+.+.++.+.   +  +.+..+.|+.+..+....        ......+...+        
T Consensus       139 ~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  213 (347)
T PRK11908        139 YGPINKPRWIYACSKQLMDRVIWAYGMEE---G--LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISL  213 (347)
T ss_pred             cCcCCCccchHHHHHHHHHHHHHHHHHHc---C--CCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEE
Confidence            00111234579999999999888877654   4  566667777665543211        11111211111        


Q ss_pred             -----HhhhcCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          220 -----SFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       220 -----~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                           ..+-+...+|+++.++.++.++. ....|..|+.+
T Consensus       214 ~~~g~~~r~~i~v~D~a~a~~~~~~~~~-~~~~g~~yni~  252 (347)
T PRK11908        214 VDGGSQKRAFTDIDDGIDALMKIIENKD-GVASGKIYNIG  252 (347)
T ss_pred             ecCCceeeccccHHHHHHHHHHHHhCcc-ccCCCCeEEeC
Confidence                 11224578899999999986322 11235545443

>PLN02427 UDP-apiose/xylose synthase

Probab=99.63  E-value=6.6e-14  Score=125.25  Aligned_cols=227  Identities=11%  Similarity=0.068  Sum_probs=139.7

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|.||+++++.|+++ |++|++++|+.+............. ..++.++.+|++|.+.+.++++       .+|+
T Consensus        18 lVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~-------~~d~   89 (386)
T PLN02427         18 CMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW-SGRIQFHRINIKHDSRLEGLIK-------MADL   89 (386)
T ss_pred             EEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccC-CCCeEEEEcCCCChHHHHHHhh-------cCCE
Confidence            69999999999999999998 5899999987654433221100000 2368999999999888877664       4799


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc-cc-cCCC--
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI-RF-QKIN--  155 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~~-~~~~--  155 (288)
                      |||+|+...+..  ...+..+.+..|+.++.++++++...          ..++|++||...+....... .. .++.  
T Consensus        90 ViHlAa~~~~~~--~~~~~~~~~~~n~~gt~~ll~aa~~~----------~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~  157 (386)
T PLN02427         90 TINLAAICTPAD--YNTRPLDTIYSNFIDALPVVKYCSEN----------NKRLIHFSTCEVYGKTIGSFLPKDHPLRQD  157 (386)
T ss_pred             EEEcccccChhh--hhhChHHHHHHHHHHHHHHHHHHHhc----------CCEEEEEeeeeeeCCCcCCCCCcccccccc
Confidence            999999754321  11223456678999999888776432          23899999975432111100 00 0010  


Q ss_pred             -------CCCC-------CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC----------C-h
Q 023054          156 -------DRAG-------YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH----------S-A  210 (288)
Q Consensus       156 -------~~~~-------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~----------~-~  210 (288)
                             +...       ..+...|+.+|.+.+.+++.+++.   .+  +.+..+.|+.+-.+-...          . .
T Consensus       158 ~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~  232 (386)
T PLN02427        158 PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NG--LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR  232 (386)
T ss_pred             cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cC--CceEEecccceeCCCCCccccccccccccch
Confidence                   0000       012357999999999888776544   35  888889999887764210          0 0


Q ss_pred             HHHHHHHHH----H---------hhhcCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          211 VVMRFLKFF----S---------FFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       211 ~~~~~~~~~----~---------~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      ....+....    +         ..-+...+|+|++++.++.++  ....|..|+.+
T Consensus       233 ~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~--~~~~g~~yni~  287 (386)
T PLN02427        233 VLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP--ARANGHIFNVG  287 (386)
T ss_pred             HHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc--ccccCceEEeC
Confidence            111111111    0         112456889999999988532  12245555543

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.62  E-value=4.3e-14  Score=122.66  Aligned_cols=207  Identities=20%  Similarity=0.121  Sum_probs=138.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||++++++|.++|++|+.++|.........         ..+.++.+|+++.+.+....+..     . |+|
T Consensus         4 LVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d~v   68 (314)
T COG0451           4 LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-DAV   68 (314)
T ss_pred             EEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-CEE
Confidence            69999999999999999999999999999765433221         24788899999985555554421     1 999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC-CC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR-AG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~-~~  159 (288)
                      ||+|+.......... .....+.+|+.++..+++++..  ..       -.++|+.||.......   .....+++. ..
T Consensus        69 ih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~--~~-------~~~~v~~ss~~~~~~~---~~~~~~~E~~~~  135 (314)
T COG0451          69 IHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARA--AG-------VKRFVFASSVSVVYGD---PPPLPIDEDLGP  135 (314)
T ss_pred             EEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHH--cC-------CCeEEEeCCCceECCC---CCCCCcccccCC
Confidence            999998754322222 4567899999999999999876  11       3488886665544322   111123333 23


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHH----HHHHHH--hh--------
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMR----FLKFFS--FF--------  222 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~----~~~~~~--~~--------  222 (288)
                      ..+...|+.+|.+.+.++..++.   ..+  +.+..+.|+.+-.+.....   .....    ..+..+  ..        
T Consensus       136 ~~p~~~Yg~sK~~~E~~~~~~~~---~~~--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (314)
T COG0451         136 PRPLNPYGVSKLAAEQLLRAYAR---LYG--LPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTR  210 (314)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHH---HhC--CCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeE
Confidence            33334799999999999988888   344  7888889887765543321   11111    111111  00        


Q ss_pred             hcCChHHHHHHHHHHhcC
Q 023054          223 LWKNVPQGAATTCYVALH  240 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~  240 (288)
                      .+...+|+++.++.++..
T Consensus       211 ~~i~v~D~a~~~~~~~~~  228 (314)
T COG0451         211 DFVYVDDVADALLLALEN  228 (314)
T ss_pred             eeEeHHHHHHHHHHHHhC
Confidence            133478999999999964

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.61  E-value=8.4e-14  Score=119.50  Aligned_cols=185  Identities=17%  Similarity=0.125  Sum_probs=128.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||.+++++|.++|++|++++|+                       .+|+.+.+++.++++..     ++|+|
T Consensus         3 lv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d~v   54 (287)
T TIGR01214         3 LITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPDAV   54 (287)
T ss_pred             EEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCCEE
Confidence            699999999999999999999999999885                       46999999888887642     68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+.....  ......+..+++|+.++..+++++...          +.++|++||...+...    ...++++....
T Consensus        55 i~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~Ss~~vy~~~----~~~~~~E~~~~  118 (287)
T TIGR01214        55 VNTAAYTDVD--GAESDPEKAFAVNALAPQNLARAAARH----------GARLVHISTDYVFDGE----GKRPYREDDAT  118 (287)
T ss_pred             EECCcccccc--ccccCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEeeeeeecCC----CCCCCCCCCCC
Confidence            9999975321  122345678899999999998886431          2489999996543211    11123333333


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh-----------hhcCChHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF-----------FLWKNVPQ  229 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  229 (288)
                      .+...|+.+|.+.+.+++.+       +  .++..+.|+.+-.+..... +...+......           ..+...+|
T Consensus       119 ~~~~~Y~~~K~~~E~~~~~~-------~--~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  188 (287)
T TIGR01214       119 NPLNVYGQSKLAGEQAIRAA-------G--PNALIVRTSWLYGGGGGRN-FVRTMLRLAGRGEELRVVDDQIGSPTYAKD  188 (287)
T ss_pred             CCcchhhHHHHHHHHHHHHh-------C--CCeEEEEeeecccCCCCCC-HHHHHHHHhhcCCCceEecCCCcCCcCHHH
Confidence            45678999999988877654       3  4677899998876653211 12222221110           11234689


Q ss_pred             HHHHHHHHhc
Q 023054          230 GAATTCYVAL  239 (288)
Q Consensus       230 ~a~~~~~l~~  239 (288)
                      +++.+..++.
T Consensus       189 va~a~~~~~~  198 (287)
T TIGR01214       189 LARVIAALLQ  198 (287)
T ss_pred             HHHHHHHHHh
Confidence            9999999995

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.59  E-value=2.8e-14  Score=123.80  Aligned_cols=204  Identities=16%  Similarity=0.071  Sum_probs=129.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh--cCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA--LNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--~~~~id   78 (288)
                      |||||+|.||++++++|+++|++++++.|+.......            ..+..+|++|..+.+.+++.+.+  .++++|
T Consensus         3 lVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          3 IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF------------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH------------HhhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            6999999999999999999999766665554322110            01234577776666665555432  245799


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+|+.....   . .+.+..++.|+.++..+++++...          +.++|++||...+.....    ...++..
T Consensus        71 ~Vih~A~~~~~~---~-~~~~~~~~~n~~~t~~ll~~~~~~----------~~~~i~~SS~~vyg~~~~----~~~~E~~  132 (308)
T PRK11150         71 AIFHEGACSSTT---E-WDGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYGGRTD----DFIEERE  132 (308)
T ss_pred             EEEECceecCCc---C-CChHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEcchHHhCcCCC----CCCccCC
Confidence            999999865432   1 122457899999999998887532          247999999865432111    1233333


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHH--------------
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFS--------------  220 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~--------------  220 (288)
                      ...+...|+.+|.+.+.+++.++.+.   +  +.+..+.|+.+-.+-....    .....+...+.              
T Consensus       133 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~  207 (308)
T PRK11150        133 YEKPLNVYGYSKFLFDEYVRQILPEA---N--SQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENF  207 (308)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCce
Confidence            44556789999999998887775543   4  7778888888766542211    01111111111              


Q ss_pred             hhhcCChHHHHHHHHHHhc
Q 023054          221 FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       221 ~~~~~~~~~~a~~~~~l~~  239 (288)
                      .+-+...+|+|++++.++.
T Consensus       208 ~r~~i~v~D~a~a~~~~~~  226 (308)
T PRK11150        208 KRDFVYVGDVAAVNLWFWE  226 (308)
T ss_pred             eeeeeeHHHHHHHHHHHHh
Confidence            0112367899999988885

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.57  E-value=2.1e-13  Score=130.24  Aligned_cols=214  Identities=11%  Similarity=0.041  Sum_probs=137.9

Q ss_pred             CcccCCChhHHHHHHHHHHC--CCEEEEEeCCh--HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALR--KAHVIIAARNM--AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~--G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||+|.||+++++.|.++  |++|++++|..  .....    +.......++.++.+|++|.+.+..++..     .+
T Consensus        10 LVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~~   80 (668)
T PLN02260         10 LITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKN----LNPSKSSPNFKFVKGDIASADLVNYLLIT-----EG   80 (668)
T ss_pred             EEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhh----hhhcccCCCeEEEECCCCChHHHHHHHhh-----cC
Confidence            69999999999999999998  67899888753  12211    11111134688999999998877665432     37


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +|+|||+|+......  ..++..+.+++|+.++..+++++...-   .     -.++|++||...+....... .....+
T Consensus        81 ~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~-----vkr~I~~SS~~vyg~~~~~~-~~~~~E  149 (668)
T PLN02260         81 IDTIMHFAAQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKVTG---Q-----IRRFIHVSTDEVYGETDEDA-DVGNHE  149 (668)
T ss_pred             CCEEEECCCccCchh--hhhCHHHHHHHHHHHHHHHHHHHHhcC---C-----CcEEEEEcchHHhCCCcccc-ccCccc
Confidence            999999999764321  122345778999999999988875321   0     24899999976442211100 001122


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHH-------------hhh
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFS-------------FFL  223 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-------------~~~  223 (288)
                      .....+...|+.+|.+.+.+++.+++++   +  +.+.++.|+.+-.+-.........+.....             ..-
T Consensus       150 ~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~--l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~  224 (668)
T PLN02260        150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---G--LPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRS  224 (668)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEe
Confidence            2233356789999999999998877664   4  778889998887654321111212211111             012


Q ss_pred             cCChHHHHHHHHHHhc
Q 023054          224 WKNVPQGAATTCYVAL  239 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~  239 (288)
                      +...+|+|+.++.++.
T Consensus       225 ~ihV~Dva~a~~~~l~  240 (668)
T PLN02260        225 YLYCEDVAEAFEVVLH  240 (668)
T ss_pred             eEEHHHHHHHHHHHHh
Confidence            2467899999998875

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.54  E-value=7.4e-14  Score=116.80  Aligned_cols=166  Identities=16%  Similarity=0.129  Sum_probs=123.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC-CCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED-DTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|.||.+++.+|.++|+.|++++.=..........+++.. .+.++.++..|+.|...+++++++.     ++|.
T Consensus         6 LVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----~fd~   80 (343)
T KOG1371|consen    6 LVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----KFDA   80 (343)
T ss_pred             EEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----CCce
Confidence            699999999999999999999999999863333233333333221 1467999999999999999999876     6999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |+|.|+...-..  +-+....+.+.|+.|+++++..+..+-         -..+|+.||...+ +.+..   -++.+...
T Consensus        81 V~Hfa~~~~vge--S~~~p~~Y~~nNi~gtlnlLe~~~~~~---------~~~~V~sssatvY-G~p~~---ip~te~~~  145 (343)
T KOG1371|consen   81 VMHFAALAAVGE--SMENPLSYYHNNIAGTLNLLEVMKAHN---------VKALVFSSSATVY-GLPTK---VPITEEDP  145 (343)
T ss_pred             EEeehhhhccch--hhhCchhheehhhhhHHHHHHHHHHcC---------CceEEEecceeee-cCcce---eeccCcCC
Confidence            999999765443  334558899999999999998876654         1367887776544 32222   24444433


Q ss_pred             CC-ccccchhhHHHHHHHHHHHHHHhcc
Q 023054          160 YS-DKKAYGQSKLANILHANELSRRFQE  186 (288)
Q Consensus       160 ~~-~~~~Y~~sK~a~~~~~~~la~~~~~  186 (288)
                      .. +...||.+|.+++...+.+...+..
T Consensus       146 t~~p~~pyg~tK~~iE~i~~d~~~~~~~  173 (343)
T KOG1371|consen  146 TDQPTNPYGKTKKAIEEIIHDYNKAYGW  173 (343)
T ss_pred             CCCCCCcchhhhHHHHHHHHhhhccccc
Confidence            44 8889999999999999988877663

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.53  E-value=1.8e-13  Score=130.30  Aligned_cols=204  Identities=11%  Similarity=0.034  Sum_probs=134.2

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHH-HHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS-IKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~~id   78 (288)
                      |||||+|.||++++++|.++ |++|+.++|+.......   .    ...+++++.+|++|... ++++++       ++|
T Consensus       319 LVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~----~~~~~~~~~gDl~d~~~~l~~~l~-------~~D  384 (660)
T PRK08125        319 LILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L----GHPRFHFVEGDISIHSEWIEYHIK-------KCD  384 (660)
T ss_pred             EEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c----CCCceEEEeccccCcHHHHHHHhc-------CCC
Confidence            69999999999999999986 79999999976543221   1    12358889999998654 333332       689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+|+...+..  ..+..+..+++|+.++..+++++...          +.++|++||...+.. ...   ..+++..
T Consensus       385 ~ViHlAa~~~~~~--~~~~~~~~~~~Nv~~t~~ll~a~~~~----------~~~~V~~SS~~vyg~-~~~---~~~~E~~  448 (660)
T PRK08125        385 VVLPLVAIATPIE--YTRNPLRVFELDFEENLKIIRYCVKY----------NKRIIFPSTSEVYGM-CTD---KYFDEDT  448 (660)
T ss_pred             EEEECccccCchh--hccCHHHHHHhhHHHHHHHHHHHHhc----------CCeEEEEcchhhcCC-CCC---CCcCccc
Confidence            9999999765422  12334568899999999999887642          138999999754321 111   1122211


Q ss_pred             C-------CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC--------ChHHHHHHHHHH---
Q 023054          159 G-------YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH--------SAVVMRFLKFFS---  220 (288)
Q Consensus       159 ~-------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~~---  220 (288)
                      .       ..+...|+.||.+.+.+++.+++++   +  +++..+.|+.+..+-...        ......+.....   
T Consensus       449 ~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~  523 (660)
T PRK08125        449 SNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---G--LRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS  523 (660)
T ss_pred             cccccCCCCCCccchHHHHHHHHHHHHHHHHhc---C--CceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCC
Confidence            1       1234579999999999888876664   4  778888888887653211        011111111110   


Q ss_pred             ----------hhhcCChHHHHHHHHHHhc
Q 023054          221 ----------FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       221 ----------~~~~~~~~~~a~~~~~l~~  239 (288)
                                .+-+...+|++++++.++.
T Consensus       524 ~i~~~g~g~~~rd~i~v~Dva~a~~~~l~  552 (660)
T PRK08125        524 PIKLVDGGKQKRCFTDIRDGIEALFRIIE  552 (660)
T ss_pred             CeEEeCCCceeeceeeHHHHHHHHHHHHh
Confidence                      1123467899999988885

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.52  E-value=2.7e-13  Score=120.53  Aligned_cols=208  Identities=13%  Similarity=0.035  Sum_probs=133.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||+++++.|.++|++|++++|.....   .   ...  .....++.+|+++.+.+..++.       ++|+|
T Consensus        25 lVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~---~---~~~--~~~~~~~~~Dl~d~~~~~~~~~-------~~D~V   89 (370)
T PLN02695         25 CITGAGGFIASHIARRLKAEGHYIIASDWKKNEH---M---SED--MFCHEFHLVDLRVMENCLKVTK-------GVDHV   89 (370)
T ss_pred             EEECCccHHHHHHHHHHHhCCCEEEEEEeccccc---c---ccc--cccceEEECCCCCHHHHHHHHh-------CCCEE
Confidence            6999999999999999999999999999864321   0   000  1125678899999877666543       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc-cCCCCCC-
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF-QKINDRA-  158 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~-~~~~~~~-  158 (288)
                      ||+|+...... ....+....+..|+.++.++++++...    .     -.++|++||...+.. ...... ..+.+.. 
T Consensus        90 ih~Aa~~~~~~-~~~~~~~~~~~~N~~~t~nll~aa~~~----~-----vk~~V~~SS~~vYg~-~~~~~~~~~~~E~~~  158 (370)
T PLN02695         90 FNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEAARIN----G-----VKRFFYASSACIYPE-FKQLETNVSLKESDA  158 (370)
T ss_pred             EEcccccCCcc-ccccCchhhHHHHHHHHHHHHHHHHHh----C-----CCEEEEeCchhhcCC-ccccCcCCCcCcccC
Confidence            99998653211 111233556778999999998877532    1     248999999754321 111000 0122221 


Q ss_pred             -CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHH-------------
Q 023054          159 -GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFS-------------  220 (288)
Q Consensus       159 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~-------------  220 (288)
                       ...+...|+.+|.+.+.++..++..+   +  +++..+.|+.+-.+-....    .....+.....             
T Consensus       159 ~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~  233 (370)
T PLN02695        159 WPAEPQDAYGLEKLATEELCKHYTKDF---G--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGK  233 (370)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCC
Confidence             34456789999999999888876654   4  7788888988877632110    00111111110             


Q ss_pred             -hhhcCChHHHHHHHHHHhc
Q 023054          221 -FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       221 -~~~~~~~~~~a~~~~~l~~  239 (288)
                       ..-+...+|+++.+++++.
T Consensus       234 ~~r~~i~v~D~a~ai~~~~~  253 (370)
T PLN02695        234 QTRSFTFIDECVEGVLRLTK  253 (370)
T ss_pred             eEEeEEeHHHHHHHHHHHHh
Confidence             1123467799999998875

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.52  E-value=1.4e-13  Score=118.96  Aligned_cols=139  Identities=17%  Similarity=0.123  Sum_probs=101.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||+++++.|.++| +|+.++|...                   .+..|++|.+.+.++++..     ++|+|
T Consensus         4 LVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D~V   58 (299)
T PRK09987          4 LLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPDVI   58 (299)
T ss_pred             EEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence            699999999999999999999 7888887521                   2357999999988877743     68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+......  ..++.+..+.+|+.++.++++++...          +.++|++||..-+-.    ....+..+....
T Consensus        59 ih~Aa~~~~~~--~~~~~~~~~~~N~~~~~~l~~aa~~~----------g~~~v~~Ss~~Vy~~----~~~~p~~E~~~~  122 (299)
T PRK09987         59 VNAAAHTAVDK--AESEPEFAQLLNATSVEAIAKAANEV----------GAWVVHYSTDYVFPG----TGDIPWQETDAT  122 (299)
T ss_pred             EECCccCCcch--hhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEccceEECC----CCCCCcCCCCCC
Confidence            99999764321  22344667889999999998887542          247999988664321    111233344445


Q ss_pred             CccccchhhHHHHHHHHHHH
Q 023054          161 SDKKAYGQSKLANILHANEL  180 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~l  180 (288)
                      .+...|+.+|.+.+.+++.+
T Consensus       123 ~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987        123 APLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             CCCCHHHHHHHHHHHHHHHh
Confidence            56678999999988877654

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.52  E-value=9.9e-14  Score=116.68  Aligned_cols=176  Identities=18%  Similarity=0.178  Sum_probs=101.7

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHH---HHHHHHHHHhhC--------CCCceEEEEecCCChH------H
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAA---ANEARQLILKED--------DTARVDTLKLDLSSIA------S   62 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~---~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~------~   62 (288)
                      ||||||.||.++..+|++++.  +|+++.|....   .+++.+.+.+..        ...+++++..|++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997632   233322222110        1578999999999854      3


Q ss_pred             HHHHHHHHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc
Q 023054           63 IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ  142 (288)
Q Consensus        63 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  142 (288)
                      ...+.+       .+|+|||||+.....     ..+++..++|+.|+..+++.+...    +     ..+++++||....
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~-----~~~~~~~~~NV~gt~~ll~la~~~----~-----~~~~~~iSTa~v~  139 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN-----APYSELRAVNVDGTRNLLRLAAQG----K-----RKRFHYISTAYVA  139 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHTSS----S--------EEEEEEGGGT
T ss_pred             hhcccc-------ccceeeecchhhhhc-----ccchhhhhhHHHHHHHHHHHHHhc----c-----CcceEEecccccc
Confidence            333333       589999999976432     245668899999999999888621    1     2389999993221


Q ss_pred             ccccCCcc-----ccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccC
Q 023054          143 YTYKGGIR-----FQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT  203 (288)
Q Consensus       143 ~~~~~~~~-----~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t  203 (288)
                      ........     ...............|..||...+.+.+..+.+   .|  +.+..+.||.+-.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g--~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  140 GSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HG--LPVTIYRPGIIVG  200 (249)
T ss_dssp             TS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H-----EEEEEE-EEE-
T ss_pred             CCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CC--ceEEEEecCcccc
Confidence            11111110     111222233345568999999999988877765   24  7888899999965

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.51  E-value=1.8e-13  Score=118.47  Aligned_cols=159  Identities=16%  Similarity=0.053  Sum_probs=111.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||+++++.|.++|++|+++.+.                      ..+|+++.+++.++++..     ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            799999999999999999999987766432                      147999998888877653     68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC--
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA--  158 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~--  158 (288)
                      ||+|+....... ..+.....+++|+.++..+++++...-         -.++|++||..-+ +..   ...+.++..  
T Consensus        54 ih~A~~~~~~~~-~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~i~~SS~~vy-g~~---~~~~~~E~~~~  119 (306)
T PLN02725         54 ILAAAKVGGIHA-NMTYPADFIRENLQIQTNVIDAAYRHG---------VKKLLFLGSSCIY-PKF---APQPIPETALL  119 (306)
T ss_pred             EEeeeeecccch-hhhCcHHHHHHHhHHHHHHHHHHHHcC---------CCeEEEeCceeec-CCC---CCCCCCHHHhc
Confidence            999997532111 123345688999999999988886431         2489999997533 211   111222211  


Q ss_pred             --CC-CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          159 --GY-SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       159 --~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                        .. +....|+.+|.+.+.+.+.+.++.   +  +++..+.|+.+..+-
T Consensus       120 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~  164 (306)
T PLN02725        120 TGPPEPTNEWYAIAKIAGIKMCQAYRIQY---G--WDAISGMPTNLYGPH  164 (306)
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCCC
Confidence              11 222359999999998888776554   4  788889998887664

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.51  E-value=5.3e-13  Score=115.94  Aligned_cols=205  Identities=10%  Similarity=-0.006  Sum_probs=129.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|.||.++++.|.++|+ .|++++|..... ... ++     .  ...+..|+.+.+.++.+.+.   ...++|+
T Consensus         2 lItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~-----~--~~~~~~d~~~~~~~~~~~~~---~~~~~D~   69 (314)
T TIGR02197         2 IVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NL-----A--DLVIADYIDKEDFLDRLEKG---AFGKIEA   69 (314)
T ss_pred             EEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hh-----h--heeeeccCcchhHHHHHHhh---ccCCCCE
Confidence            6999999999999999999998 688887654321 111 11     1  13456788887766665542   2357999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||+|+....    ..++.+..+++|+.++..+++++...          +.++|++||...+ +...    ..+.+...
T Consensus        70 vvh~A~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~v~~SS~~vy-~~~~----~~~~e~~~  130 (314)
T TIGR02197        70 IFHQGACSDT----TETDGEYMMENNYQYSKRLLDWCAEK----------GIPFIYASSAATY-GDGE----AGFREGRE  130 (314)
T ss_pred             EEECccccCc----cccchHHHHHHHHHHHHHHHHHHHHh----------CCcEEEEccHHhc-CCCC----CCcccccC
Confidence            9999996432    23456778999999999999887542          2479999997543 2111    11222221


Q ss_pred             -CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC---C-hHHHHHHHHHH--------------
Q 023054          160 -YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH---S-AVVMRFLKFFS--------------  220 (288)
Q Consensus       160 -~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~---~-~~~~~~~~~~~--------------  220 (288)
                       ..+...|+.+|.+.+.+++....+... +  +++..+.|+.+-.+-...   . .....+.....              
T Consensus       131 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~-~--~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (314)
T TIGR02197       131 LERPLNVYGYSKFLFDQYVRRRVLPEAL-S--AQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGF  207 (314)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHhHhhcc-C--CceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCcccc
Confidence             225668999999998888764333221 2  567777777775553211   0 11111111110              


Q ss_pred             -----hhhcCChHHHHHHHHHHhc
Q 023054          221 -----FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       221 -----~~~~~~~~~~a~~~~~l~~  239 (288)
                           ..-+...+|+++.++.++.
T Consensus       208 ~~g~~~~~~i~v~D~a~~i~~~~~  231 (314)
T TIGR02197       208 KDGEQLRDFVYVKDVVDVNLWLLE  231 (314)
T ss_pred             CCCCceeeeEEHHHHHHHHHHHHh
Confidence                 0123567899999999996

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.49  E-value=3.8e-13  Score=120.17  Aligned_cols=190  Identities=16%  Similarity=0.092  Sum_probs=127.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANE--ARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||+++++.|+++|++|++++|+......  ...++...  ..++.++.+|++|.+++.++++..   ..++|
T Consensus        64 LVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~---~~~~D  138 (390)
T PLN02657         64 LVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE---GDPVD  138 (390)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh---CCCCc
Confidence            699999999999999999999999999998765321  11112112  235889999999999999888753   12699


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||||++....       .....+++|+.++.++++++..    .+     -.++|++||....                
T Consensus       139 ~Vi~~aa~~~~-------~~~~~~~vn~~~~~~ll~aa~~----~g-----v~r~V~iSS~~v~----------------  186 (390)
T PLN02657        139 VVVSCLASRTG-------GVKDSWKIDYQATKNSLDAGRE----VG-----AKHFVLLSAICVQ----------------  186 (390)
T ss_pred             EEEECCccCCC-------CCccchhhHHHHHHHHHHHHHH----cC-----CCEEEEEeecccc----------------
Confidence            99999985321       1124467788888887777642    22     3589999997632                


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHH-----HHhh-----hcCChH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF-----FSFF-----LWKNVP  228 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~-----~~~~-----~~~~~~  228 (288)
                        .+...|..+|...+...+.     ...+  ++...|.|+.+..++..   ........     +...     ...+.+
T Consensus       187 --~p~~~~~~sK~~~E~~l~~-----~~~g--l~~tIlRp~~~~~~~~~---~~~~~~~g~~~~~~GdG~~~~~~~I~v~  254 (390)
T PLN02657        187 --KPLLEFQRAKLKFEAELQA-----LDSD--FTYSIVRPTAFFKSLGG---QVEIVKDGGPYVMFGDGKLCACKPISEA  254 (390)
T ss_pred             --CcchHHHHHHHHHHHHHHh-----ccCC--CCEEEEccHHHhcccHH---HHHhhccCCceEEecCCcccccCceeHH
Confidence              2345688899887766543     2345  88899999877543321   11111100     1111     124667


Q ss_pred             HHHHHHHHHhc
Q 023054          229 QGAATTCYVAL  239 (288)
Q Consensus       229 ~~a~~~~~l~~  239 (288)
                      |+|..++.++.
T Consensus       255 DlA~~i~~~~~  265 (390)
T PLN02657        255 DLASFIADCVL  265 (390)
T ss_pred             HHHHHHHHHHh
Confidence            99999999885

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.48  E-value=9.4e-13  Score=114.70  Aligned_cols=180  Identities=12%  Similarity=0.051  Sum_probs=118.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||||.||++++++|.++|++|++++|+.+.....    .    ...+.++.+|++|.+++.++++       ++|+|
T Consensus         4 lVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~----~~~v~~v~~Dl~d~~~l~~al~-------g~d~V   68 (317)
T CHL00194          4 LVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----K----EWGAELVYGDLSLPETLPPSFK-------GVTAI   68 (317)
T ss_pred             EEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----h----hcCCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence            6999999999999999999999999999987543221    1    1247899999999988876664       68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+++...       .+.....++|+.++.++++++...    +     -.++|++||.....                +
T Consensus        69 i~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~~----g-----vkr~I~~Ss~~~~~----------------~  116 (317)
T CHL00194         69 IDASTSRP-------SDLYNAKQIDWDGKLALIEAAKAA----K-----IKRFIFFSILNAEQ----------------Y  116 (317)
T ss_pred             EECCCCCC-------CCccchhhhhHHHHHHHHHHHHHc----C-----CCEEEEeccccccc----------------c
Confidence            99876421       123456778888888888777542    1     24899999864321                1


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHH----H----HhhhcCChHHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF----F----SFFLWKNVPQGAA  232 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----~----~~~~~~~~~~~a~  232 (288)
                       +...|..+|...+.+.+       ..+  +.+..+.|+.+..++....  .......    .    ....+...+|+|+
T Consensus       117 -~~~~~~~~K~~~e~~l~-------~~~--l~~tilRp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  184 (317)
T CHL00194        117 -PYIPLMKLKSDIEQKLK-------KSG--IPYTIFRLAGFFQGLISQY--AIPILEKQPIWITNESTPISYIDTQDAAK  184 (317)
T ss_pred             -CCChHHHHHHHHHHHHH-------HcC--CCeEEEeecHHhhhhhhhh--hhhhccCCceEecCCCCccCccCHHHHHH
Confidence             22457788887665543       235  7777788886533221111  0000000    0    0111235589999


Q ss_pred             HHHHHhc
Q 023054          233 TTCYVAL  239 (288)
Q Consensus       233 ~~~~l~~  239 (288)
                      .++.++.
T Consensus       185 ~~~~~l~  191 (317)
T CHL00194        185 FCLKSLS  191 (317)
T ss_pred             HHHHHhc
Confidence            9999885

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.43  E-value=4.3e-12  Score=114.76  Aligned_cols=203  Identities=14%  Similarity=0.065  Sum_probs=128.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||++++++|.++|++|++++|...........+.   ...++.++..|+.+..     +       .++|+|
T Consensus       124 LVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~~~~~~~~~~Di~~~~-----~-------~~~D~V  188 (436)
T PLN02166        124 VVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---GNPRFELIRHDVVEPI-----L-------LEVDQI  188 (436)
T ss_pred             EEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---cCCceEEEECcccccc-----c-------cCCCEE
Confidence            699999999999999999999999999875322111111111   1235778888887542     1       258999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC---
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR---  157 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~---  157 (288)
                      ||+|+......  ...+....+.+|+.++..++.++...          +.++|++||...+. .+..   .++++.   
T Consensus       189 iHlAa~~~~~~--~~~~p~~~~~~Nv~gT~nLleaa~~~----------g~r~V~~SS~~VYg-~~~~---~p~~E~~~~  252 (436)
T PLN02166        189 YHLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLAKRV----------GARFLLTSTSEVYG-DPLE---HPQKETYWG  252 (436)
T ss_pred             EECceeccchh--hccCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECcHHHhC-CCCC---CCCCccccc
Confidence            99998754322  11234678999999999999887643          23899999975442 1111   111111   


Q ss_pred             --CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCC--CChHHHHHHHHHH-------------
Q 023054          158 --AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFK--HSAVVMRFLKFFS-------------  220 (288)
Q Consensus       158 --~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~-------------  220 (288)
                        ....+...|+.+|.+.+.+++.+++..   +  +++..+.|+.+-.+...  .......+...+.             
T Consensus       253 ~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~--l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~  327 (436)
T PLN02166        253 NVNPIGERSCYDEGKRTAETLAMDYHRGA---G--VEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQ  327 (436)
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCe
Confidence              123345679999999999888876654   3  66666777666554321  1111111111110             


Q ss_pred             hhhcCChHHHHHHHHHHhc
Q 023054          221 FFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       221 ~~~~~~~~~~a~~~~~l~~  239 (288)
                      .+-+...+|+++.++.++.
T Consensus       328 ~rdfi~V~Dva~ai~~~~~  346 (436)
T PLN02166        328 TRSFQYVSDLVDGLVALME  346 (436)
T ss_pred             EEeeEEHHHHHHHHHHHHh
Confidence            1223467799999998884

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.43  E-value=3.9e-12  Score=115.27  Aligned_cols=207  Identities=12%  Similarity=0.027  Sum_probs=128.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||++++++|.++|++|++++|......+.   +.......++.++..|+.+..     +       .++|+|
T Consensus       123 LVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~~-----l-------~~~D~V  187 (442)
T PLN02206        123 VVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEPI-----L-------LEVDQI  187 (442)
T ss_pred             EEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccChh-----h-------cCCCEE
Confidence            6999999999999999999999999988753221111   111111345788888987642     1       258999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCC-ccccCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGG-IRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~~~~~~~~~~  159 (288)
                      ||+|+...+..  ..++....+++|+.++.++++++...          +.++|++||...+...... ...........
T Consensus       188 iHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLleaa~~~----------g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P  255 (442)
T PLN02206        188 YHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV----------GARFLLTSTSEVYGDPLQHPQVETYWGNVNP  255 (442)
T ss_pred             EEeeeecchhh--hhcCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECChHHhCCCCCCCCCccccccCCC
Confidence            99998754321  12345778999999999999887542          2489999997654321110 00000001112


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCC--CChHHHHHHHHH------H-------hhhc
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFK--HSAVVMRFLKFF------S-------FFLW  224 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~--~~~~~~~~~~~~------~-------~~~~  224 (288)
                      ..+...|+.+|.+.+.+++.+.+..   +  +.+..+.|+.+-.+...  .......+....      .       ..-+
T Consensus       256 ~~~~s~Y~~SK~~aE~~~~~y~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdf  330 (442)
T PLN02206        256 IGVRSCYDEGKRTAETLTMDYHRGA---N--VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  330 (442)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeE
Confidence            2335679999999998888776654   3  66777777666554311  111111111111      0       1123


Q ss_pred             CChHHHHHHHHHHhc
Q 023054          225 KNVPQGAATTCYVAL  239 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~  239 (288)
                      ...+|+|+.++.++.
T Consensus       331 i~V~Dva~ai~~a~e  345 (442)
T PLN02206        331 QFVSDLVEGLMRLME  345 (442)
T ss_pred             EeHHHHHHHHHHHHh
Confidence            467899999998885

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.40  E-value=3.6e-12  Score=102.03  Aligned_cols=181  Identities=18%  Similarity=0.122  Sum_probs=120.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+||||.+|+.++++|.++|++|+++.|++++.++          ..+++++.+|+.|++++.+.+.       +.|++
T Consensus         2 ~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~v   64 (183)
T PF13460_consen    2 LVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADAV   64 (183)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcchh
Confidence            589999999999999999999999999999987665          3569999999999988877765       68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |+++|....             +      ...++.++..+.+.+     -.++|++||.......+...      .....
T Consensus        65 i~~~~~~~~-------------~------~~~~~~~~~a~~~~~-----~~~~v~~s~~~~~~~~~~~~------~~~~~  114 (183)
T PF13460_consen   65 IHAAGPPPK-------------D------VDAAKNIIEAAKKAG-----VKRVVYLSSAGVYRDPPGLF------SDEDK  114 (183)
T ss_dssp             EECCHSTTT-------------H------HHHHHHHHHHHHHTT-----SSEEEEEEETTGTTTCTSEE------EGGTC
T ss_pred             hhhhhhhcc-------------c------ccccccccccccccc-----cccceeeeccccCCCCCccc------ccccc
Confidence            999975422             0      445555666665543     45899999877554211100      00001


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhc
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  239 (288)
                      +....|...|...+.+.       ...+  ++...+.||++..+..........  .........+.+|+|..++.++.
T Consensus       115 ~~~~~~~~~~~~~e~~~-------~~~~--~~~~ivrp~~~~~~~~~~~~~~~~--~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  115 PIFPEYARDKREAEEAL-------RESG--LNWTIVRPGWIYGNPSRSYRLIKE--GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             GGGHHHHHHHHHHHHHH-------HHST--SEEEEEEESEEEBTTSSSEEEESS--TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             cchhhhHHHHHHHHHHH-------HhcC--CCEEEEECcEeEeCCCcceeEEec--cCCCCcCcCCHHHHHHHHHHHhC
Confidence            11234555555443322       2345  899999999997665332211100  00111234578899999998874

...

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.40  E-value=3.8e-11  Score=114.75  Aligned_cols=174  Identities=21%  Similarity=0.181  Sum_probs=113.1

Q ss_pred             CcccCCChhHHHHHHHHH--HCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHH--HHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLA--LRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI--KDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La--~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~--~~~~~~~~~~~~~   76 (288)
                      |||||||.||++++++|+  ++|++|++++|+... ..... +.......++.++.+|++|.+..  ....+.+    .+
T Consensus         4 LVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~-~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~   77 (657)
T PRK07201          4 FVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEA-LAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GD   77 (657)
T ss_pred             EEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHH-HHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cC
Confidence            699999999999999999  589999999996533 12111 11111124689999999985310  1112222    37


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +|+|||+|+.....     ......+.+|+.++..+++++...    +     ..++|++||...............++ 
T Consensus        78 ~D~Vih~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~~----~-----~~~~v~~SS~~v~g~~~~~~~e~~~~-  142 (657)
T PRK07201         78 IDHVVHLAAIYDLT-----ADEEAQRAANVDGTRNVVELAERL----Q-----AATFHHVSSIAVAGDYEGVFREDDFD-  142 (657)
T ss_pred             CCEEEECceeecCC-----CCHHHHHHHHhHHHHHHHHHHHhc----C-----CCeEEEEeccccccCccCccccccch-
Confidence            99999999975321     234567789999998888776432    1     35899999976543211111111111 


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN  204 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~  204 (288)
                       ........|+.+|...+.+.+.      ..+  +.+..+.|+.+..+
T Consensus       143 -~~~~~~~~Y~~sK~~~E~~~~~------~~g--~~~~ilRp~~v~G~  181 (657)
T PRK07201        143 -EGQGLPTPYHRTKFEAEKLVRE------ECG--LPWRVYRPAVVVGD  181 (657)
T ss_pred             -hhcCCCCchHHHHHHHHHHHHH------cCC--CcEEEEcCCeeeec
Confidence             1122345799999998887653      235  88899999998654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.38  E-value=4.4e-12  Score=108.73  Aligned_cols=185  Identities=17%  Similarity=0.131  Sum_probs=119.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|-||.++++.|.++|++|+.++|+                       .+|++|.+.+.++++..     ++|+|
T Consensus         4 LI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd~V   55 (286)
T PF04321_consen    4 LITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPDVV   55 (286)
T ss_dssp             EEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------SEE
T ss_pred             EEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCCeE
Confidence            699999999999999999999999999777                       57999999999998876     79999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|++....  .-+.+.+..+.+|+.++..+.+.+...          +.++|++||..-.-+.    ...+..+....
T Consensus        56 in~aa~~~~~--~ce~~p~~a~~iN~~~~~~la~~~~~~----------~~~li~~STd~VFdG~----~~~~y~E~d~~  119 (286)
T PF04321_consen   56 INCAAYTNVD--ACEKNPEEAYAINVDATKNLAEACKER----------GARLIHISTDYVFDGD----KGGPYTEDDPP  119 (286)
T ss_dssp             EE------HH--HHHHSHHHHHHHHTHHHHHHHHHHHHC----------T-EEEEEEEGGGS-SS----TSSSB-TTS--
T ss_pred             eccceeecHH--hhhhChhhhHHHhhHHHHHHHHHHHHc----------CCcEEEeeccEEEcCC----cccccccCCCC
Confidence            9999986331  122446788999999999998888642          4699999997543221    11223344455


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhh-----------hcCChHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFF-----------LWKNVPQ  229 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  229 (288)
                      .+...||.+|...+.+++..    .+     +...+.++++..+  ....+...+.+.....           .....++
T Consensus       120 ~P~~~YG~~K~~~E~~v~~~----~~-----~~~IlR~~~~~g~--~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~d  188 (286)
T PF04321_consen  120 NPLNVYGRSKLEGEQAVRAA----CP-----NALILRTSWVYGP--SGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDD  188 (286)
T ss_dssp             --SSHHHHHHHHHHHHHHHH-----S-----SEEEEEE-SEESS--SSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHh----cC-----CEEEEecceeccc--CCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHH
Confidence            67789999999988776651    11     2344677777666  2223344444433211           1124568


Q ss_pred             HHHHHHHHhcC
Q 023054          230 GAATTCYVALH  240 (288)
Q Consensus       230 ~a~~~~~l~~~  240 (288)
                      +|..++.++..
T Consensus       189 lA~~i~~l~~~  199 (286)
T PF04321_consen  189 LARVILELIEK  199 (286)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999999863

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.32  E-value=3.5e-11  Score=100.67  Aligned_cols=183  Identities=18%  Similarity=0.151  Sum_probs=127.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||||++|-+|.++++.|. .+.+|+.++|..                       +|++|.+.+.+++.+.     ++|+|
T Consensus         4 Li~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDvV   54 (281)
T COG1091           4 LITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDVV   54 (281)
T ss_pred             EEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCEE
Confidence            699999999999999999 678899888764                       7999999999999986     89999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|++....  .-+.+.+..+.+|..++.++.+++...          +.++|++|+-.-.-+..    ..+-.+....
T Consensus        55 In~AAyt~vD--~aE~~~e~A~~vNa~~~~~lA~aa~~~----------ga~lVhiSTDyVFDG~~----~~~Y~E~D~~  118 (281)
T COG1091          55 INAAAYTAVD--KAESEPELAFAVNATGAENLARAAAEV----------GARLVHISTDYVFDGEK----GGPYKETDTP  118 (281)
T ss_pred             EECccccccc--cccCCHHHHHHhHHHHHHHHHHHHHHh----------CCeEEEeecceEecCCC----CCCCCCCCCC
Confidence            9999987543  233456889999999999999988654          56899999866432211    1112233345


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh---------hh--cCChHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF---------FL--WKNVPQ  229 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~--~~~~~~  229 (288)
                      .+...||.||.+.+.+++...    ++.     ..|.-.|+......++  ...+.+....         ..  -...++
T Consensus       119 ~P~nvYG~sKl~GE~~v~~~~----~~~-----~I~Rtswv~g~~g~nF--v~tml~la~~~~~l~vv~Dq~gsPt~~~d  187 (281)
T COG1091         119 NPLNVYGRSKLAGEEAVRAAG----PRH-----LILRTSWVYGEYGNNF--VKTMLRLAKEGKELKVVDDQYGSPTYTED  187 (281)
T ss_pred             CChhhhhHHHHHHHHHHHHhC----CCE-----EEEEeeeeecCCCCCH--HHHHHHHhhcCCceEEECCeeeCCccHHH
Confidence            677899999999888776643    322     2233444544433333  2222222111         11  125569


Q ss_pred             HHHHHHHHhc
Q 023054          230 GAATTCYVAL  239 (288)
Q Consensus       230 ~a~~~~~l~~  239 (288)
                      +|..+..++.
T Consensus       188 lA~~i~~ll~  197 (281)
T COG1091         188 LADAILELLE  197 (281)
T ss_pred             HHHHHHHHHh
Confidence            9999999885

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.31  E-value=1.3e-10  Score=99.82  Aligned_cols=176  Identities=21%  Similarity=0.217  Sum_probs=116.9

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChH---HHHHHHHHHH-----hhCCCCceEEEEecCCC------hHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMA---AANEARQLIL-----KEDDTARVDTLKLDLSS------IASIKD   65 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~---~~~~~~~~~~-----~~~~~~~~~~~~~Dl~~------~~~~~~   65 (288)
                      ++|||||.+|..++.+|..+- ++|++.-|-++   ..+++.+.+.     .+....+++.+..|++.      .....+
T Consensus         4 lLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~   83 (382)
T COG3320           4 LLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQE   83 (382)
T ss_pred             EEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHH
Confidence            589999999999999998754 58999887433   2333333333     12226789999999993      334444


Q ss_pred             HHHHHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc
Q 023054           66 FAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY  145 (288)
Q Consensus        66 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  145 (288)
                      +.+       .+|.+|||++.....     ..+.+....|+.|+..+++.+...  +       .-.+.+|||++..-..
T Consensus        84 La~-------~vD~I~H~gA~Vn~v-----~pYs~L~~~NVlGT~evlrLa~~g--k-------~Kp~~yVSsisv~~~~  142 (382)
T COG3320          84 LAE-------NVDLIIHNAALVNHV-----FPYSELRGANVLGTAEVLRLAATG--K-------PKPLHYVSSISVGETE  142 (382)
T ss_pred             Hhh-------hcceEEecchhhccc-----CcHHHhcCcchHhHHHHHHHHhcC--C-------CceeEEEeeeeecccc
Confidence            443       589999999876432     346778889999999988877432  1       1248899997654321


Q ss_pred             cCC---cccc--CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccC
Q 023054          146 KGG---IRFQ--KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT  203 (288)
Q Consensus       146 ~~~---~~~~--~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t  203 (288)
                      ...   .+..  .-+-..+......|+.||.+.+.+++.    -...|  +++..+.||++..
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~----A~~rG--Lpv~I~Rpg~I~g  199 (382)
T COG3320         143 YYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVRE----AGDRG--LPVTIFRPGYITG  199 (382)
T ss_pred             ccCCCccccccccccccccCccCCCcchhHHHHHHHHHH----HhhcC--CCeEEEecCeeec
Confidence            111   1111  111223444567899999997776654    44446  8888899999943

>PRK05865 hypothetical protein; Provisional

Probab=99.29  E-value=7.3e-11  Score=113.26  Aligned_cols=161  Identities=16%  Similarity=0.088  Sum_probs=112.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||+|+||++++++|+++|++|++++|+....      .     ..++.++.+|++|.+++.++++       ++|+|
T Consensus         4 LVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~vD~V   65 (854)
T PRK05865          4 AVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GADVV   65 (854)
T ss_pred             EEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            6999999999999999999999999999975321      1     1257889999999998887765       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+....           .+++|+.++.++++++.    +.+     .++||++||..                    
T Consensus        66 VHlAa~~~~-----------~~~vNv~GT~nLLeAa~----~~g-----vkr~V~iSS~~--------------------  105 (854)
T PRK05865         66 AHCAWVRGR-----------NDHINIDGTANVLKAMA----ETG-----TGRIVFTSSGH--------------------  105 (854)
T ss_pred             EECCCcccc-----------hHHHHHHHHHHHHHHHH----HcC-----CCeEEEECCcH--------------------
Confidence            999985421           46889999888776653    322     35899999831                    


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHH--HHHh------hhcCChHHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK--FFSF------FLWKNVPQGAA  232 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~------~~~~~~~~~a~  232 (288)
                               |.+.+.+.+    +   .+  +.+..+.|+.+-.+-...  +......  .++.      ..+...+|+|+
T Consensus       106 ---------K~aaE~ll~----~---~g--l~~vILRp~~VYGP~~~~--~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~  165 (854)
T PRK05865        106 ---------QPRVEQMLA----D---CG--LEWVAVRCALIFGRNVDN--WVQRLFALPVLPAGYADRVVQVVHSDDAQR  165 (854)
T ss_pred             ---------HHHHHHHHH----H---cC--CCEEEEEeceEeCCChHH--HHHHHhcCceeccCCCCceEeeeeHHHHHH
Confidence                     666665443    2   35  788888998887663211  1111111  0110      12356789999


Q ss_pred             HHHHHhc
Q 023054          233 TTCYVAL  239 (288)
Q Consensus       233 ~~~~l~~  239 (288)
                      +++.++.
T Consensus       166 Ai~~aL~  172 (854)
T PRK05865        166 LLVRALL  172 (854)
T ss_pred             HHHHHHh
Confidence            9998884

>PLN02778 3,5-epimerase/4-reductase

Probab=99.28  E-value=6.7e-11  Score=102.08  Aligned_cols=140  Identities=12%  Similarity=0.046  Sum_probs=89.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||+++++.|.++|++|++..                          .|+.+.+.+...++.     .++|+|
T Consensus        13 LVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~-----~~~D~V   61 (298)
T PLN02778         13 LIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDA-----VKPTHV   61 (298)
T ss_pred             EEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHh-----cCCCEE
Confidence            6999999999999999999999986432                          234455555444443     268999


Q ss_pred             EEccccCCCCC-CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC-Cc-cccCCCCC
Q 023054           81 INNAGIMFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG-GI-RFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~-~~~~~~~~  157 (288)
                      ||+||...... +...++..+.+++|+.++.++++++...          +.+.+++||...+..... .. ....+.++
T Consensus        62 iH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----------gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee  131 (298)
T PLN02778         62 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER----------GLVLTNYATGCIFEYDDAHPLGSGIGFKEE  131 (298)
T ss_pred             EECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----------CCCEEEEecceEeCCCCCCCcccCCCCCcC
Confidence            99999864321 1122456789999999999999998643          124555655432211000 00 00112222


Q ss_pred             -CCCCccccchhhHHHHHHHHHHHH
Q 023054          158 -AGYSDKKAYGQSKLANILHANELS  181 (288)
Q Consensus       158 -~~~~~~~~Y~~sK~a~~~~~~~la  181 (288)
                       ...++...|+.||.+.+.+++.++
T Consensus       132 ~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        132 DTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHhh
Confidence             222334689999999999888765

>PLN02996 fatty acyl-CoA reductase

Probab=99.28  E-value=6.1e-11  Score=108.88  Aligned_cols=212  Identities=9%  Similarity=0.074  Sum_probs=129.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC---EEEEEeCChHH---HHHHHHH---------HHhhCC-------CCceEEEEecCC
Q 023054            1 MLAGGASGIGLETARVLALRKA---HVIIAARNMAA---ANEARQL---------ILKEDD-------TARVDTLKLDLS   58 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~~-------~~~~~~~~~Dl~   58 (288)
                      +||||||.||.+++..|++.+.   +|+++.|....   .+++..+         +.+..+       ..++.++..|++
T Consensus        15 lvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~   94 (491)
T PLN02996         15 LVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDIS   94 (491)
T ss_pred             EEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccC
Confidence            5899999999999999998653   68888885531   1111111         111111       157899999998


Q ss_pred             Ch-------HHHHHHHHHHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCC
Q 023054           59 SI-------ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEG  131 (288)
Q Consensus        59 ~~-------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g  131 (288)
                      ++       +.++.+++       .+|+|||+|+....     .+..+..+.+|+.++..+++++...- .       -.
T Consensus        95 ~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~~a~~~~-~-------~k  154 (491)
T PLN02996         95 YDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----DERYDVALGINTLGALNVLNFAKKCV-K-------VK  154 (491)
T ss_pred             CcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----cCCHHHHHHHHHHHHHHHHHHHHhcC-C-------CC
Confidence            43       33344433       58999999997642     13567899999999999998875421 1       23


Q ss_pred             eEEEEcCccccccccCCccccCCC---------------------------------C------------CC--CCCccc
Q 023054          132 RIVNLSSIAHQYTYKGGIRFQKIN---------------------------------D------------RA--GYSDKK  164 (288)
Q Consensus       132 ~iv~vsS~~~~~~~~~~~~~~~~~---------------------------------~------------~~--~~~~~~  164 (288)
                      ++|++||........+.+...+.+                                 +            ..  ......
T Consensus       155 ~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn  234 (491)
T PLN02996        155 MLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPN  234 (491)
T ss_pred             eEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCC
Confidence            799999876542211111000000                                 0            00  011224


Q ss_pred             cchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-HH------HHHHHHHH-------------hhhc
Q 023054          165 AYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-VV------MRFLKFFS-------------FFLW  224 (288)
Q Consensus       165 ~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-~~------~~~~~~~~-------------~~~~  224 (288)
                      .|+.||++.+.+++..+     .+  +.+..+.|..|..+.....+ +.      ..+.....             ..-+
T Consensus       235 ~Y~~TK~~aE~lv~~~~-----~~--lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~  307 (491)
T PLN02996        235 TYVFTKAMGEMLLGNFK-----EN--LPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDV  307 (491)
T ss_pred             chHhhHHHHHHHHHHhc-----CC--CCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecce
Confidence            69999999998886542     25  88999999999766533321 11      11111000             1222


Q ss_pred             CChHHHHHHHHHHhc
Q 023054          225 KNVPQGAATTCYVAL  239 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~  239 (288)
                      ...++++++++.++.
T Consensus       308 v~Vddvv~a~l~a~~  322 (491)
T PLN02996        308 IPADMVVNAMIVAMA  322 (491)
T ss_pred             ecccHHHHHHHHHHH
Confidence            366899999988875

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.27  E-value=1.3e-10  Score=99.85  Aligned_cols=202  Identities=11%  Similarity=0.079  Sum_probs=109.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||.++++.|+++|++|++++|+........          ...  ..|+.. ..       ..+...++|+|
T Consensus         2 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~--~~~~~~-~~-------~~~~~~~~D~V   61 (292)
T TIGR01777         2 LITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----------WEG--YKPWAP-LA-------ESEALEGADAV   61 (292)
T ss_pred             EEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----------cee--eecccc-cc-------hhhhcCCCCEE
Confidence            69999999999999999999999999999876432110          001  112222 11       11223479999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+||........+.+.....+++|+.++..+++++...-.        ...+++.+|..+.++....   ..+.+....
T Consensus        62 vh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--------~~~~~i~~S~~~~yg~~~~---~~~~E~~~~  130 (292)
T TIGR01777        62 INLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQ--------KPKVFISASAVGYYGTSED---RVFTEEDSP  130 (292)
T ss_pred             EECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCC--------CceEEEEeeeEEEeCCCCC---CCcCcccCC
Confidence            99999753322223334456788899998888877753210        1123333333333321111   122222211


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHH-----HH----hhhcCChHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF-----FS----FFLWKNVPQGA  231 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~a  231 (288)
                      .+...|+..+...+...+    .+...+  +.+..+.|+.+-.+-.............     +.    ..-+...+|+|
T Consensus       131 ~~~~~~~~~~~~~e~~~~----~~~~~~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva  204 (292)
T TIGR01777       131 AGDDFLAELCRDWEEAAQ----AAEDLG--TRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLV  204 (292)
T ss_pred             CCCChHHHHHHHHHHHhh----hchhcC--CceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHH
Confidence            122233333333333222    223345  8899999999977632111111111110     11    12335788999


Q ss_pred             HHHHHHhc
Q 023054          232 ATTCYVAL  239 (288)
Q Consensus       232 ~~~~~l~~  239 (288)
                      +.++.++.
T Consensus       205 ~~i~~~l~  212 (292)
T TIGR01777       205 QLILFALE  212 (292)
T ss_pred             HHHHHHhc
Confidence            99999995

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.26  E-value=2.2e-10  Score=99.26  Aligned_cols=179  Identities=16%  Similarity=0.148  Sum_probs=124.0

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|.+|.++++.|.+++  ..|.+++..+..-.-..++...  ...++.++.+|+.|..++.+.++       +. 
T Consensus         8 lVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~~~i~~a~~-------~~-   77 (361)
T KOG1430|consen    8 LVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF--RSGRVTVILGDLLDANSISNAFQ-------GA-   77 (361)
T ss_pred             EEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc--cCCceeEEecchhhhhhhhhhcc-------Cc-
Confidence            699999999999999999998  6899998876421111111110  14679999999999888777665       56 


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      .+||+|....+..  -..+.+..+++|+.|+.+++..+...-         -.++|++||..-..+...   ...-++..
T Consensus        78 ~Vvh~aa~~~~~~--~~~~~~~~~~vNV~gT~nvi~~c~~~~---------v~~lIYtSs~~Vvf~g~~---~~n~~E~~  143 (361)
T KOG1430|consen   78 VVVHCAASPVPDF--VENDRDLAMRVNVNGTLNVIEACKELG---------VKRLIYTSSAYVVFGGEP---IINGDESL  143 (361)
T ss_pred             eEEEeccccCccc--cccchhhheeecchhHHHHHHHHHHhC---------CCEEEEecCceEEeCCee---cccCCCCC
Confidence            7888877654432  223578899999999999888886654         248999999876654222   11122333


Q ss_pred             CCCc--cccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC
Q 023054          159 GYSD--KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH  208 (288)
Q Consensus       159 ~~~~--~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~  208 (288)
                      +++.  ...|+.||+-.+.+++....   ...  ....++.|-.|-.|-.+.
T Consensus       144 p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~--l~T~aLR~~~IYGpgd~~  190 (361)
T KOG1430|consen  144 PYPLKHIDPYGESKALAEKLVLEANG---SDD--LYTCALRPPGIYGPGDKR  190 (361)
T ss_pred             CCccccccccchHHHHHHHHHHHhcC---CCC--eeEEEEccccccCCCCcc
Confidence            3443  35899999998887776544   334  888999998887765443

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.24  E-value=7.8e-10  Score=87.69  Aligned_cols=171  Identities=14%  Similarity=0.148  Sum_probs=116.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||+ |+|.++++.|+++|++|++++|+++..+.+...+..   ..++.++.+|++|.+++.++++.+.+.++++|.+
T Consensus         4 lVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          4 LVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             EEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            589998 777789999999999999999998877666554432   3568899999999999999999998888899999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |+.....                    ++-.+..++...-.+.+     ..+++.+-...+.                  
T Consensus        80 v~~vh~~--------------------~~~~~~~~~~~~gv~~~-----~~~~~h~~gs~~~------------------  116 (177)
T PRK08309         80 VAWIHSS--------------------AKDALSVVCRELDGSSE-----TYRLFHVLGSAAS------------------  116 (177)
T ss_pred             EEecccc--------------------chhhHHHHHHHHccCCC-----CceEEEEeCCcCC------------------
Confidence            9777643                    22223333322221111     3367666443321                  


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhcC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  240 (288)
                      ++               +.-+..++...  +.---|..|++..+-...               |.+-+|+++.++..+.+
T Consensus       117 ~~---------------~~~~~~~~~~~--~~~~~i~lgf~~~~~~~r---------------wlt~~ei~~gv~~~~~~  164 (177)
T PRK08309        117 DP---------------RIPSEKIGPAR--CSYRRVILGFVLEDTYSR---------------WLTHEEISDGVIKAIES  164 (177)
T ss_pred             ch---------------hhhhhhhhhcC--CceEEEEEeEEEeCCccc---------------cCchHHHHHHHHHHHhc
Confidence            00               01122222233  445557789998765443               36889999999999987


Q ss_pred             CCccCCCcee
Q 023054          241 PNLKGVTGKY  250 (288)
Q Consensus       241 ~~~~~~tG~~  250 (288)
                      +.+..+.|+.
T Consensus       165 ~~~~~~~g~~  174 (177)
T PRK08309        165 DADEHVVGTV  174 (177)
T ss_pred             CCCeEEEEEe
Confidence            7777776653

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.20  E-value=1.8e-10  Score=94.79  Aligned_cols=185  Identities=15%  Similarity=0.090  Sum_probs=135.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh--hCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILK--EDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      ||||-||.-|.-+++.|.++|+.|+.+.|+........-.+..  ...+.+++++.+||+|..++.++++.+     .+|
T Consensus         6 LITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-----~Pd   80 (345)
T COG1089           6 LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-----QPD   80 (345)
T ss_pred             EEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-----Cch
Confidence            6999999999999999999999999998875432211101111  112455899999999999999999987     789


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      -+.|.|+...-  ..+.+....+.+++..|++.|+.++.-+-.+       ..|+..-||+.-.    +....-+-++..
T Consensus        81 EIYNLaAQS~V--~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~-------~~rfYQAStSE~f----G~v~~~pq~E~T  147 (345)
T COG1089          81 EIYNLAAQSHV--GVSFEQPEYTADVDAIGTLRLLEAIRILGEK-------KTRFYQASTSELY----GLVQEIPQKETT  147 (345)
T ss_pred             hheeccccccc--cccccCcceeeeechhHHHHHHHHHHHhCCc-------ccEEEecccHHhh----cCcccCccccCC
Confidence            99999986543  3456777889999999999999988765422       3577777775432    233344556777


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccC-CceEEEEeeCCcccC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEG-VNITANSVHPGLIMT  203 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~-~~i~v~~v~PG~v~t  203 (288)
                      ++.+.++|+++|....-++..++..++..- ..|-+|.=+|.-=.|
T Consensus       148 PFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~  193 (345)
T COG1089         148 PFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGET  193 (345)
T ss_pred             CCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccc
Confidence            788999999999998888888888877541 127777766654333

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.19  E-value=5.1e-10  Score=94.59  Aligned_cols=179  Identities=17%  Similarity=0.119  Sum_probs=134.5

Q ss_pred             CcccC-CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC----
Q 023054            1 MLAGG-ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL----   75 (288)
Q Consensus         1 lItGa-s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~----   75 (288)
                      ||.|. +.-|++.+|..|-++|+-|+++..+.+..+....+-     ...+.....|..+..++...+.++.+...    
T Consensus         7 vI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-----~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~   81 (299)
T PF08643_consen    7 VIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-----RPDIRPLWLDDSDPSSIHASLSRFASLLSRPHV   81 (299)
T ss_pred             EEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-----CCCCCCcccCCCCCcchHHHHHHHHHHhcCCCC
Confidence            46674 789999999999999999999999987655544332     24477888888887777777777665432    


Q ss_pred             ----------CcceEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEc-Cccc
Q 023054           76 ----------PLNILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLS-SIAH  141 (288)
Q Consensus        76 ----------~id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vs-S~~~  141 (288)
                                .+..||.......+   ...++.+.|.+.++.|+..++..++.++|+++.+..   .+.+||++. |+.+
T Consensus        82 p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~---~~~~iil~~Psi~s  158 (299)
T PF08643_consen   82 PFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSN---QKSKIILFNPSISS  158 (299)
T ss_pred             CCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCceEEEEeCchhh
Confidence                      24555555443332   236777899999999999999999999999988320   035666655 5544


Q ss_pred             cccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC
Q 023054          142 QYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN  204 (288)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~  204 (288)
                      .+               ..+....-.....++.+|+..|++|+.+.+  |.|..+..|.++-.
T Consensus       159 sl---------------~~PfhspE~~~~~al~~~~~~LrrEl~~~~--I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  159 SL---------------NPPFHSPESIVSSALSSFFTSLRRELRPHN--IDVTQIKLGNLDIG  204 (299)
T ss_pred             cc---------------CCCccCHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEEeeeeccc
Confidence            44               355666778888999999999999999998  99999999998654

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.13  E-value=7.1e-09  Score=107.08  Aligned_cols=217  Identities=19%  Similarity=0.136  Sum_probs=130.2

Q ss_pred             CcccCCChhHHHHHHHHHHCC----CEEEEEeCChHHHH---HHHHHHHhhC-----CCCceEEEEecCCChHHH--HHH
Q 023054            1 MLAGGASGIGLETARVLALRK----AHVIIAARNMAAAN---EARQLILKED-----DTARVDTLKLDLSSIASI--KDF   66 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G----~~V~~~~r~~~~~~---~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~--~~~   66 (288)
                      +||||+|.||.+++++|++++    .+|+.+.|+.....   ...+.+....     ...++.++.+|++++.--  ...
T Consensus       975 lvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~ 1054 (1389)
T TIGR03443       975 FLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEK 1054 (1389)
T ss_pred             EEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHH
Confidence            589999999999999999987    78999988754322   2222111100     023689999999854210  111


Q ss_pred             HHHHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccccccc
Q 023054           67 AQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYK  146 (288)
Q Consensus        67 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  146 (288)
                      .+++.   ..+|++||||+.....     ..+......|+.++..+++.+...    +     ..+++++||...+....
T Consensus      1055 ~~~l~---~~~d~iiH~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~~----~-----~~~~v~vSS~~v~~~~~ 1117 (1389)
T TIGR03443      1055 WSDLT---NEVDVIIHNGALVHWV-----YPYSKLRDANVIGTINVLNLCAEG----K-----AKQFSFVSSTSALDTEY 1117 (1389)
T ss_pred             HHHHH---hcCCEEEECCcEecCc-----cCHHHHHHhHHHHHHHHHHHHHhC----C-----CceEEEEeCeeecCccc
Confidence            22222   3689999999976421     234445568999999998876431    1     24899999976542100


Q ss_pred             CC--------ccccCCCCC-----CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----
Q 023054          147 GG--------IRFQKINDR-----AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----  209 (288)
Q Consensus       147 ~~--------~~~~~~~~~-----~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----  209 (288)
                      ..        .....+.+.     ........|+.||.+.+.+++.++.    .|  +.+..+.||.+..+-....    
T Consensus      1118 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g--~~~~i~Rpg~v~G~~~~g~~~~~ 1191 (1389)
T TIGR03443      1118 YVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RG--LRGCIVRPGYVTGDSKTGATNTD 1191 (1389)
T ss_pred             ccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CC--CCEEEECCCccccCCCcCCCCch
Confidence            00        000001111     1112235699999999988776433    36  8899999999965532211    


Q ss_pred             hHHHHHHHHH------H----hhhcCChHHHHHHHHHHhcC
Q 023054          210 AVVMRFLKFF------S----FFLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       210 ~~~~~~~~~~------~----~~~~~~~~~~a~~~~~l~~~  240 (288)
                      .+.....+..      +    ..-+...++++++++.++..
T Consensus      1192 ~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~ 1232 (1389)
T TIGR03443      1192 DFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALN 1232 (1389)
T ss_pred             hHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhC
Confidence            1222222111      1    12344678999999999863

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.13  E-value=1e-09  Score=90.36  Aligned_cols=223  Identities=12%  Similarity=0.061  Sum_probs=143.0

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHH-HHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAA-NEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      +||||.+.||...+..++..=  ++.+.++.-.-.. ...+++...   ..+..+++.|+.+...+..++.+     .++
T Consensus        10 lItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n---~p~ykfv~~di~~~~~~~~~~~~-----~~i   81 (331)
T KOG0747|consen   10 LITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN---SPNYKFVEGDIADADLVLYLFET-----EEI   81 (331)
T ss_pred             EEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc---CCCceEeeccccchHHHHhhhcc-----Cch
Confidence            699999999999999999753  3444443211000 122222222   46789999999998877776653     489


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC-C
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN-D  156 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~-~  156 (288)
                      |.|+|.|....-..  +--+.-+....|++++..|+....-....        -++|++|+..-+.    +.+.+... +
T Consensus        82 d~vihfaa~t~vd~--s~~~~~~~~~nnil~t~~Lle~~~~sg~i--------~~fvhvSTdeVYG----ds~~~~~~~E  147 (331)
T KOG0747|consen   82 DTVIHFAAQTHVDR--SFGDSFEFTKNNILSTHVLLEAVRVSGNI--------RRFVHVSTDEVYG----DSDEDAVVGE  147 (331)
T ss_pred             hhhhhhHhhhhhhh--hcCchHHHhcCCchhhhhHHHHHHhccCe--------eEEEEecccceec----Cccccccccc
Confidence            99999998654322  11123456778999999999988766522        3899999976542    22222222 4


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHH-------------HHhhh
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF-------------FSFFL  223 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~-------------~~~~~  223 (288)
                      .+-..+..+|+++|+|.+++.+++.+.++     +.|..+.-+-|-.|-.-.......+.+.             ...+.
T Consensus       148 ~s~~nPtnpyAasKaAaE~~v~Sy~~sy~-----lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs  222 (331)
T KOG0747|consen  148 ASLLNPTNPYAASKAAAEMLVRSYGRSYG-----LPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRS  222 (331)
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHhhccC-----CcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCccccee
Confidence            55567888999999999999999999987     4455555555544432222111111111             11233


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +...+|+++++.-.+..    ...|+.++-+
T Consensus       223 ~l~veD~~ea~~~v~~K----g~~geIYNIg  249 (331)
T KOG0747|consen  223 YLYVEDVSEAFKAVLEK----GELGEIYNIG  249 (331)
T ss_pred             eEeHHHHHHHHHHHHhc----CCccceeecc
Confidence            45678999999888852    3357877644

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.13  E-value=1.1e-09  Score=100.15  Aligned_cols=151  Identities=19%  Similarity=0.147  Sum_probs=108.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+||++|+|.++++.|...|+.|+.+.+......        .....++..+.+|.+..++...               
T Consensus        42 ~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~~~---------------   98 (450)
T PRK08261         42 VLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA--------AGWGDRFGALVFDATGITDPAD---------------   98 (450)
T ss_pred             eEEccCchhHHHHHHHHhhCCCeeeecCccccccc--------cCcCCcccEEEEECCCCCCHHH---------------
Confidence            37899999999999999999999998876543110        0001223333344443332222               


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                                               +.+.+.+++..++.|..       .|+||+++|.....                 
T Consensus        99 -------------------------l~~~~~~~~~~l~~l~~-------~griv~i~s~~~~~-----------------  129 (450)
T PRK08261         99 -------------------------LKALYEFFHPVLRSLAP-------CGRVVVLGRPPEAA-----------------  129 (450)
T ss_pred             -------------------------HHHHHHHHHHHHHhccC-------CCEEEEEccccccC-----------------
Confidence                                     22444566777777754       57999999976532                 


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhcC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  240 (288)
                       ....|+++|+++.+++++++.|+ .++  +++|+|.|+.                        ..+++++..+.|+++ 
T Consensus       130 -~~~~~~~akaal~gl~rsla~E~-~~g--i~v~~i~~~~------------------------~~~~~~~~~~~~l~s-  180 (450)
T PRK08261        130 -ADPAAAAAQRALEGFTRSLGKEL-RRG--ATAQLVYVAP------------------------GAEAGLESTLRFFLS-  180 (450)
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHh-hcC--CEEEEEecCC------------------------CCHHHHHHHHHHhcC-
Confidence             23469999999999999999999 677  9999999885                        257888889999997 


Q ss_pred             CCccCCCceeec
Q 023054          241 PNLKGVTGKYFL  252 (288)
Q Consensus       241 ~~~~~~tG~~~~  252 (288)
                      +...+++|+.+.
T Consensus       181 ~~~a~~~g~~i~  192 (450)
T PRK08261        181 PRSAYVSGQVVR  192 (450)
T ss_pred             CccCCccCcEEE
Confidence            778899998776

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.12  E-value=5e-09  Score=79.25  Aligned_cols=211  Identities=11%  Similarity=0.032  Sum_probs=140.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC--CCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN--LPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~id   78 (288)
                      +|-||-+.+|.+++..|-++++-|.-++-.+.+-            ...-+.+..|-+=.++-+.+.++.-+..  .++|
T Consensus         7 ivYGGkGALGSacv~~FkannywV~siDl~eNe~------------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    7 IVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------------ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             EEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------------ccceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            4789999999999999999999887777554220            1122333334332334444455544432  3799


Q ss_pred             eEEEccccCCCCCCCC---CCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFCPYQIS---EDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      .|++.||........+   ....+-++...+.....-.+....+++.       +|-+-..+.-.+..            
T Consensus        75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~-------GGLL~LtGAkaAl~------------  135 (236)
T KOG4022|consen   75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP-------GGLLQLTGAKAALG------------  135 (236)
T ss_pred             eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC-------CceeeecccccccC------------
Confidence            9999998765432222   2345567777777666666666555543       34444444444332            


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                         +.|++..|+.+|+|++.++++|+.+-..-..+-.+.+|.|=..+|||.+.+.+...+.      .+.+.+.+++..+
T Consensus       136 ---gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfs------sWTPL~fi~e~fl  206 (236)
T KOG4022|consen  136 ---GTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFS------SWTPLSFISEHFL  206 (236)
T ss_pred             ---CCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCccc------CcccHHHHHHHHH
Confidence               5778899999999999999999988654333478899999999999998774333332      2346678899988


Q ss_pred             HHhcCCCccCCCceeec
Q 023054          236 YVALHPNLKGVTGKYFL  252 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~  252 (288)
                      .... +..+.-+|.++.
T Consensus       207 kWtt-~~~RPssGsLlq  222 (236)
T KOG4022|consen  207 KWTT-ETSRPSSGSLLQ  222 (236)
T ss_pred             HHhc-cCCCCCCCceEE
Confidence            8886 566777888664

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.11  E-value=1.8e-09  Score=103.39  Aligned_cols=151  Identities=13%  Similarity=0.013  Sum_probs=99.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||+++++.|.++|++|.+.                          ..|++|.+.+..++...     ++|+|
T Consensus       384 LVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~-----~pd~V  432 (668)
T PLN02260        384 LIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNV-----KPTHV  432 (668)
T ss_pred             EEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhh-----CCCEE
Confidence            699999999999999999999887311                          13677888777766653     68999


Q ss_pred             EEccccCCCC-CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccccccc--CCccccCCCCC
Q 023054           81 INNAGIMFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYK--GGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~--~~~~~~~~~~~  157 (288)
                      ||+|+..... .+...++....+++|+.++..+++++...          +.+++++||....-...  ......++.+.
T Consensus       433 ih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----------g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~  502 (668)
T PLN02260        433 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN----------GLLMMNFATGCIFEYDAKHPEGSGIGFKEE  502 (668)
T ss_pred             EECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----------CCeEEEEcccceecCCcccccccCCCCCcC
Confidence            9999976432 12233456789999999999999998653          23566776643221100  00001122222


Q ss_pred             -CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEee
Q 023054          158 -AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVH  197 (288)
Q Consensus       158 -~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~  197 (288)
                       ...+....|+.||.+.+.+++.+...   ..  +|+..+.
T Consensus       503 ~~~~~~~~~Yg~sK~~~E~~~~~~~~~---~~--~r~~~~~  538 (668)
T PLN02260        503 DKPNFTGSFYSKTKAMVEELLREYDNV---CT--LRVRMPI  538 (668)
T ss_pred             CCCCCCCChhhHHHHHHHHHHHhhhhh---eE--EEEEEec
Confidence             22233478999999999988776421   22  5555554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.10  E-value=6.7e-10  Score=91.39  Aligned_cols=199  Identities=14%  Similarity=0.195  Sum_probs=116.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||||-||++++..|.+.|+.|+++.|++...+....        ..+.       ..+.+    .+...  .++|+|
T Consensus         2 liTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~--------~~v~-------~~~~~----~~~~~--~~~Dav   60 (297)
T COG1090           2 LITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH--------PNVT-------LWEGL----ADALT--LGIDAV   60 (297)
T ss_pred             eEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC--------cccc-------ccchh----hhccc--CCCCEE
Confidence            689999999999999999999999999999876543211        1111       11111    11111  179999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||.||..-.....+.+.=+..    ..|.+..++.+.....+...    +.++.+-+|..++++...+.   .+++... 
T Consensus        61 INLAG~~I~~rrWt~~~K~~i----~~SRi~~T~~L~e~I~~~~~----~P~~~isaSAvGyYG~~~~~---~~tE~~~-  128 (297)
T COG1090          61 INLAGEPIAERRWTEKQKEEI----RQSRINTTEKLVELIAASET----KPKVLISASAVGYYGHSGDR---VVTEESP-  128 (297)
T ss_pred             EECCCCccccccCCHHHHHHH----HHHHhHHHHHHHHHHHhccC----CCcEEEecceEEEecCCCce---eeecCCC-
Confidence            999997644332333322233    45777788888877765432    46777777888877533322   2222211 


Q ss_pred             CccccchhhHHHHHHHHHHHHHH---hcccCCceEEEEeeCCcccCCCCCCChHHHHHHHH-----H----HhhhcCChH
Q 023054          161 SDKKAYGQSKLANILHANELSRR---FQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF-----F----SFFLWKNVP  228 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~---~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~-----~----~~~~~~~~~  228 (288)
                       +...      .+..+++.|-.+   ....|  +||+.+.-|.|-.+--...+......+.     +    ....|...|
T Consensus       129 -~g~~------Fla~lc~~WE~~a~~a~~~g--tRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhie  199 (297)
T COG1090         129 -PGDD------FLAQLCQDWEEEALQAQQLG--TRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIE  199 (297)
T ss_pred             -CCCC------hHHHHHHHHHHHHhhhhhcC--ceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHH
Confidence             1111      133344444333   22335  9999999999976433222111111110     1    123456889


Q ss_pred             HHHHHHHHHhcCC
Q 023054          229 QGAATTCYVALHP  241 (288)
Q Consensus       229 ~~a~~~~~l~~~~  241 (288)
                      |..+.++|++.+.
T Consensus       200 D~v~~I~fll~~~  212 (297)
T COG1090         200 DLVNAILFLLENE  212 (297)
T ss_pred             HHHHHHHHHHhCc
Confidence            9999999999743

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.05  E-value=5.3e-09  Score=97.45  Aligned_cols=122  Identities=7%  Similarity=0.128  Sum_probs=84.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCC---EEEEEeCChHH---HHHHHHH---------HHhhCC-------CCceEEEEecCC
Q 023054            1 MLAGGASGIGLETARVLALRKA---HVIIAARNMAA---ANEARQL---------ILKEDD-------TARVDTLKLDLS   58 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~~-------~~~~~~~~~Dl~   58 (288)
                      +||||||.||..+++.|++.+.   +|+++.|....   .++..++         +++..+       ..++.++..|++
T Consensus       123 lVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~  202 (605)
T PLN02503        123 LITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVC  202 (605)
T ss_pred             EEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCC
Confidence            5899999999999999998764   68888885422   2222222         222222       247899999999


Q ss_pred             ChH------HHHHHHHHHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCe
Q 023054           59 SIA------SIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGR  132 (288)
Q Consensus        59 ~~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~  132 (288)
                      ++.      ..+.+.+       .+|+|||+|+....     .+.++..+++|+.++..+++.+...- .       -.+
T Consensus       203 d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~~-~-------lk~  262 (605)
T PLN02503        203 ESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKCK-K-------LKL  262 (605)
T ss_pred             CcccCCCHHHHHHHHh-------cCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHcC-C-------CCe
Confidence            863      3333322       58999999997642     14578889999999999998876431 1       236


Q ss_pred             EEEEcCcccc
Q 023054          133 IVNLSSIAHQ  142 (288)
Q Consensus       133 iv~vsS~~~~  142 (288)
                      +|++||....
T Consensus       263 fV~vSTayVy  272 (605)
T PLN02503        263 FLQVSTAYVN  272 (605)
T ss_pred             EEEccCceee
Confidence            8888886543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.98  E-value=9.4e-10  Score=90.82  Aligned_cols=93  Identities=15%  Similarity=0.226  Sum_probs=68.8

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      ++||||+++|+.|+++|++|+++++...        +. .  ..   ...+|+++.+++.++++.+.+.++++|+|||||
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~-~--~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA   88 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRA--------LK-P--EP---HPNLSIREIETTKDLLITLKELVQEHDILIHSM   88 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhh--------cc-c--cc---CCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            3789999999999999999999986311        10 0  01   235899999999999999999889999999999


Q ss_pred             ccCCC--CCCCCCCcchhhhhhhhhHHHHHHH
Q 023054           85 GIMFC--PYQISEDGIEMQFATNHIGHFLLTN  114 (288)
Q Consensus        85 g~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~  114 (288)
                      |+...  ....+.++|+++   +..+.+++.+
T Consensus        89 gv~d~~~~~~~s~e~~~~~---~~~~~~~~~~  117 (227)
T TIGR02114        89 AVSDYTPVYMTDLEQVQAS---DNLNEFLSKQ  117 (227)
T ss_pred             EeccccchhhCCHHHHhhh---cchhhhhccc
Confidence            97643  234555666655   4445555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.98  E-value=3.7e-09  Score=90.69  Aligned_cols=174  Identities=14%  Similarity=0.105  Sum_probs=105.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC-cce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP-LNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-id~   79 (288)
                      +||||||.||++++++|.++|++|.++.|+.++..           ...+..+.+|+.|.+++...++.. +...+ +|.
T Consensus         3 lVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~   70 (285)
T TIGR03649         3 LLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISA   70 (285)
T ss_pred             EEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeE
Confidence            69999999999999999999999999999976431           123566789999999998887543 22335 999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ++++++...       +..            ...+.++..+.+.+     -.+||++||......               
T Consensus        71 v~~~~~~~~-------~~~------------~~~~~~i~aa~~~g-----v~~~V~~Ss~~~~~~---------------  111 (285)
T TIGR03649        71 VYLVAPPIP-------DLA------------PPMIKFIDFARSKG-----VRRFVLLSASIIEKG---------------  111 (285)
T ss_pred             EEEeCCCCC-------Chh------------HHHHHHHHHHHHcC-----CCEEEEeeccccCCC---------------
Confidence            999876321       100            11123344444432     358999988543210               


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHH---HHHHH--HHhhhcCChHHHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVM---RFLKF--FSFFLWKNVPQGAA  232 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~---~~~~~--~~~~~~~~~~~~a~  232 (288)
                             +..+...+.+.+.    .  .+  +....+.|+++..++....  ....   .+...  -....+.+++|+|+
T Consensus       112 -------~~~~~~~~~~l~~----~--~g--i~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~  176 (285)
T TIGR03649       112 -------GPAMGQVHAHLDS----L--GG--VEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIAR  176 (285)
T ss_pred             -------CchHHHHHHHHHh----c--cC--CCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHH
Confidence                   0112222222211    1  25  8888899997765442211  0000   00000  11233568899999


Q ss_pred             HHHHHhcC
Q 023054          233 TTCYVALH  240 (288)
Q Consensus       233 ~~~~l~~~  240 (288)
                      .+..++..
T Consensus       177 ~~~~~l~~  184 (285)
T TIGR03649       177 VAYRALTD  184 (285)
T ss_pred             HHHHHhcC
Confidence            99999863

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00016 RNA-binding protein; Provisional

Probab=98.90  E-value=1.6e-07  Score=83.92  Aligned_cols=183  Identities=15%  Similarity=0.080  Sum_probs=106.4

Q ss_pred             Ccc----cCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH-------HHHHhhCCCCceEEEEecCCChHHHHHHHHH
Q 023054            1 MLA----GGASGIGLETARVLALRKAHVIIAARNMAAANEAR-------QLILKEDDTARVDTLKLDLSSIASIKDFAQN   69 (288)
Q Consensus         1 lIt----Gas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   69 (288)
                      |||    ||+|.||.+++++|+++|++|++++|+........       .++.    ...+.++.+|+.|   +..++. 
T Consensus        56 LVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d---~~~~~~-  127 (378)
T PLN00016         56 LIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD---VKSKVA-  127 (378)
T ss_pred             EEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH---HHhhhc-
Confidence            689    99999999999999999999999999875432211       1111    1237888899876   222221 


Q ss_pred             HHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc
Q 023054           70 FIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI  149 (288)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  149 (288)
                          ..++|+|||+++..                  ..++    +.++..+.+.+     -.++|++||...+.. ... 
T Consensus       128 ----~~~~d~Vi~~~~~~------------------~~~~----~~ll~aa~~~g-----vkr~V~~SS~~vyg~-~~~-  174 (378)
T PLN00016        128 ----GAGFDVVYDNNGKD------------------LDEV----EPVADWAKSPG-----LKQFLFCSSAGVYKK-SDE-  174 (378)
T ss_pred             ----cCCccEEEeCCCCC------------------HHHH----HHHHHHHHHcC-----CCEEEEEccHhhcCC-CCC-
Confidence                13689999987621                  1122    22333333332     248999999764321 110 


Q ss_pred             cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHH--------Hh
Q 023054          150 RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF--------SF  221 (288)
Q Consensus       150 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~--------~~  221 (288)
                        .+..+.....   .+. +|...+.+.+       ..+  +.+..+.|+.+..+..... ....+...+        +.
T Consensus       175 --~p~~E~~~~~---p~~-sK~~~E~~l~-------~~~--l~~~ilRp~~vyG~~~~~~-~~~~~~~~~~~~~~i~~~g  238 (378)
T PLN00016        175 --PPHVEGDAVK---PKA-GHLEVEAYLQ-------KLG--VNWTSFRPQYIYGPGNNKD-CEEWFFDRLVRGRPVPIPG  238 (378)
T ss_pred             --CCCCCCCcCC---Ccc-hHHHHHHHHH-------HcC--CCeEEEeceeEECCCCCCc-hHHHHHHHHHcCCceeecC
Confidence              0111111111   122 7887776543       235  8889999999987653321 111111111        00


Q ss_pred             -----hhcCChHHHHHHHHHHhcC
Q 023054          222 -----FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 -----~~~~~~~~~a~~~~~l~~~  240 (288)
                           ..+...+|+|+.++.++.+
T Consensus       239 ~g~~~~~~i~v~Dva~ai~~~l~~  262 (378)
T PLN00016        239 SGIQLTQLGHVKDLASMFALVVGN  262 (378)
T ss_pred             CCCeeeceecHHHHHHHHHHHhcC
Confidence                 1133578999999999863

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.84  E-value=1.3e-07  Score=78.20  Aligned_cols=158  Identities=15%  Similarity=0.094  Sum_probs=105.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||+|.||+++|..|..+|..|++++.-.....+....+..   ..+++.+..|+..+     ++.       .+|.+
T Consensus        31 ~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~---~~~fel~~hdv~~p-----l~~-------evD~I   95 (350)
T KOG1429|consen   31 LITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG---HPNFELIRHDVVEP-----LLK-------EVDQI   95 (350)
T ss_pred             EEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc---CcceeEEEeechhH-----HHH-------Hhhhh
Confidence            5899999999999999999999999988644333332222222   23456666666643     443       47899


Q ss_pred             EEccccCCCCC-CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC-
Q 023054           81 INNAGIMFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA-  158 (288)
Q Consensus        81 v~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~-  158 (288)
                      +|.|....+.. ..   ...+++..|+.++++++..+...          +.|++..|+..- ++.|............ 
T Consensus        96 yhLAapasp~~y~~---npvktIktN~igtln~lglakrv----------~aR~l~aSTseV-Ygdp~~hpq~e~ywg~v  161 (350)
T KOG1429|consen   96 YHLAAPASPPHYKY---NPVKTIKTNVIGTLNMLGLAKRV----------GARFLLASTSEV-YGDPLVHPQVETYWGNV  161 (350)
T ss_pred             hhhccCCCCccccc---CccceeeecchhhHHHHHHHHHh----------CceEEEeecccc-cCCcccCCCcccccccc
Confidence            99998876632 22   23568899999999988777543          347888777653 3333322222222111 


Q ss_pred             -CCCccccchhhHHHHHHHHHHHHHHhccc
Q 023054          159 -GYSDKKAYGQSKLANILHANELSRRFQEE  187 (288)
Q Consensus       159 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  187 (288)
                       ...+...|...|...+.|+.+..++.+-+
T Consensus       162 npigpr~cydegKr~aE~L~~~y~k~~giE  191 (350)
T KOG1429|consen  162 NPIGPRSCYDEGKRVAETLCYAYHKQEGIE  191 (350)
T ss_pred             CcCCchhhhhHHHHHHHHHHHHhhcccCcE
Confidence             12355679999999999999998887765

>PRK12320 hypothetical protein; Provisional

Probab=98.80  E-value=3.3e-08  Score=93.31  Aligned_cols=101  Identities=18%  Similarity=0.147  Sum_probs=75.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||++++++|.++|++|++++|+....         .  ...+.++.+|+++.. +.+++       .++|+|
T Consensus         4 LVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~--~~~ve~v~~Dl~d~~-l~~al-------~~~D~V   64 (699)
T PRK12320          4 LVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------L--DPRVDYVCASLRNPV-LQELA-------GEADAV   64 (699)
T ss_pred             EEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------c--cCCceEEEccCCCHH-HHHHh-------cCCCEE
Confidence            6999999999999999999999999999875321         1  235789999999873 33322       268999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      ||+|+....          ....+|+.++.++++++..    .      +.++|++||..
T Consensus        65 IHLAa~~~~----------~~~~vNv~Gt~nLleAA~~----~------GvRiV~~SS~~  104 (699)
T PRK12320         65 IHLAPVDTS----------APGGVGITGLAHVANAAAR----A------GARLLFVSQAA  104 (699)
T ss_pred             EEcCccCcc----------chhhHHHHHHHHHHHHHHH----c------CCeEEEEECCC
Confidence            999986311          1125788888888887742    2      34899999864

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.75  E-value=5.3e-07  Score=81.74  Aligned_cols=216  Identities=14%  Similarity=0.105  Sum_probs=136.0

Q ss_pred             CcccCC-ChhHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHhh--CCCCceEEEEecCCChHHHHHHHHHHHhcCC-
Q 023054            1 MLAGGA-SGIGLETARVLALRKAHVIIAARNMAA-ANEARQLILKE--DDTARVDTLKLDLSSIASIKDFAQNFIALNL-   75 (288)
Q Consensus         1 lItGas-~gIG~~ia~~La~~G~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-   75 (288)
                      |||||+ +-||-+++..|+..|++||++..+-.+ -.+..+.+...  .++..+.++.+++.+..+++++++.+-+... 
T Consensus       400 lVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq~~  479 (866)
T COG4982         400 LVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQTE  479 (866)
T ss_pred             EEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhcccccc
Confidence            689998 679999999999999999998765432 23444445432  2366788899999999999999999865311 


Q ss_pred             -------------CcceEEEccccCCCCCCCCCCcc--hhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           76 -------------PLNILINNAGIMFCPYQISEDGI--EMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        76 -------------~id~lv~~ag~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                                   .+|.++-.|.+.... +.+.-+-  +-.+++-+.+...|+-.+.++-....  -...-+||.-.|..
T Consensus       480 t~g~~s~~~k~a~~ptll~PFAAp~v~G-~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~--v~~R~hVVLPgSPN  556 (866)
T COG4982         480 TVGPQSIHIKLAWTPTLLFPFAAPRVSG-ELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRG--VDTRLHVVLPGSPN  556 (866)
T ss_pred             ccCCcceecccccCcceeeecccCCccC-ccccCCchHHHHHHHHHHHHHHHHHHhhhhccccC--cccceEEEecCCCC
Confidence                         267777777654332 2222222  22344455555555555444332211  01124566666765


Q ss_pred             ccccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHH--hcccCCceEEEEeeCCccc-CCCCCCChHHHHHHH
Q 023054          141 HQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR--FQEEGVNITANSVHPGLIM-TNLFKHSAVVMRFLK  217 (288)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~--~~~~~~~i~v~~v~PG~v~-t~~~~~~~~~~~~~~  217 (288)
                      ..+                +.+..+|+-+|++++.++.-|..|  |+.+   +.+..-.-||+. |.+............
T Consensus       557 rG~----------------FGgDGaYgEsK~aldav~~RW~sEs~Wa~~---vsl~~A~IGWtrGTGLMg~Ndiiv~aiE  617 (866)
T COG4982         557 RGM----------------FGGDGAYGESKLALDAVVNRWHSESSWAAR---VSLAHALIGWTRGTGLMGHNDIIVAAIE  617 (866)
T ss_pred             CCc----------------cCCCcchhhHHHHHHHHHHHhhccchhhHH---HHHhhhheeeeccccccCCcchhHHHHH
Confidence            433                557789999999999987766655  4443   566666679885 555444422222222


Q ss_pred             HHHhhhcCChHHHHHHHHHHhc
Q 023054          218 FFSFFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       218 ~~~~~~~~~~~~~a~~~~~l~~  239 (288)
                      .. .-..-++++.|..++-|++
T Consensus       618 k~-GV~tyS~~EmA~~LLgL~s  638 (866)
T COG4982         618 KA-GVRTYSTDEMAFNLLGLAS  638 (866)
T ss_pred             Hh-CceecCHHHHHHHHHhhcc
Confidence            21 1223478899999999986

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.58  E-value=9.1e-07  Score=73.55  Aligned_cols=194  Identities=15%  Similarity=0.102  Sum_probs=110.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+||+|.+|+.+++.|.+.+++|.++.|+...  ...++++..    .++++.+|+.|.+++.+.++       ++|.|
T Consensus         2 ~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-------g~d~v   68 (233)
T PF05368_consen    2 LVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL----GAEVVEADYDDPESLVAALK-------GVDAV   68 (233)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT----TTEEEES-TT-HHHHHHHHT-------TCSEE
T ss_pred             EEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc----cceEeecccCCHHHHHHHHc-------CCceE
Confidence            589999999999999999999999999998743  223334333    25677999999988888776       78999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      +++.+...+      .        -......+++++...-.         .++| .||......           ...+.
T Consensus        69 ~~~~~~~~~------~--------~~~~~~~li~Aa~~agV---------k~~v-~ss~~~~~~-----------~~~~~  113 (233)
T PF05368_consen   69 FSVTPPSHP------S--------ELEQQKNLIDAAKAAGV---------KHFV-PSSFGADYD-----------ESSGS  113 (233)
T ss_dssp             EEESSCSCC------C--------HHHHHHHHHHHHHHHT----------SEEE-ESEESSGTT-----------TTTTS
T ss_pred             EeecCcchh------h--------hhhhhhhHHHhhhcccc---------ceEE-EEEeccccc-----------ccccc
Confidence            988876431      1        12233344555543221         2565 565543221           00011


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHH---------HH-HHhhhc-CChHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFL---------KF-FSFFLW-KNVPQ  229 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~---------~~-~~~~~~-~~~~~  229 (288)
                      .+...+-..|..++.+.+..       +  +....|.||+................         .. -..... .+.+|
T Consensus       114 ~p~~~~~~~k~~ie~~l~~~-------~--i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  184 (233)
T PF05368_consen  114 EPEIPHFDQKAEIEEYLRES-------G--IPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRD  184 (233)
T ss_dssp             TTHHHHHHHHHHHHHHHHHC-------T--SEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHH
T ss_pred             cccchhhhhhhhhhhhhhhc-------c--ccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHH
Confidence            12223334566655444332       5  88888999887433322111100000         00 001122 37799


Q ss_pred             HHHHHHHHhcCCCccCCCceeec
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      +|+.+..++.+ ...+..|.++.
T Consensus       185 vg~~va~il~~-p~~~~~~~~~~  206 (233)
T PF05368_consen  185 VGRAVAAILLD-PEKHNNGKTIF  206 (233)
T ss_dssp             HHHHHHHHHHS-GGGTTEEEEEE
T ss_pred             HHHHHHHHHcC-hHHhcCCEEEE
Confidence            99999999974 33333566664

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.52  E-value=6.5e-07  Score=74.13  Aligned_cols=115  Identities=21%  Similarity=0.183  Sum_probs=84.0

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      |.||||.+|+-++.+|++.|.+|++-.|-.+..-.-.+-+   +.-+++.+...|+.|++|+++++++       -++||
T Consensus        66 VFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvm---GdLGQvl~~~fd~~DedSIr~vvk~-------sNVVI  135 (391)
T KOG2865|consen   66 VFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVM---GDLGQVLFMKFDLRDEDSIRAVVKH-------SNVVI  135 (391)
T ss_pred             EecccccccHHHHHHHhhcCCeEEEeccCCccchhheeec---ccccceeeeccCCCCHHHHHHHHHh-------CcEEE
Confidence            6799999999999999999999999998554322222222   2236799999999999999999874       58999


Q ss_pred             EccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc
Q 023054           82 NNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH  141 (288)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  141 (288)
                      |.-|.-.+..+.+-      -++|+.+.-.+.+.+...-.         -++|.+|+..+
T Consensus       136 NLIGrd~eTknf~f------~Dvn~~~aerlAricke~GV---------erfIhvS~Lga  180 (391)
T KOG2865|consen  136 NLIGRDYETKNFSF------EDVNVHIAERLARICKEAGV---------ERFIHVSCLGA  180 (391)
T ss_pred             EeeccccccCCccc------ccccchHHHHHHHHHHhhCh---------hheeehhhccc
Confidence            99987544333332      35677777766666654332         37999998764

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.50  E-value=4.6e-07  Score=74.98  Aligned_cols=94  Identities=11%  Similarity=0.185  Sum_probs=59.1

Q ss_pred             cccCCC-hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            2 LAGGAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         2 ItGas~-gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||..++ +||+++|+.|+++|++|++++|+....         ..+..++.++.++     +..++.+.+.+..+.+|+|
T Consensus        20 itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~---------~~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~Div   85 (229)
T PRK06732         20 ITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK---------PEPHPNLSIIEIE-----NVDDLLETLEPLVKDHDVL   85 (229)
T ss_pred             ecCccchHHHHHHHHHHHhCCCEEEEEECccccc---------CCCCCCeEEEEEe-----cHHHHHHHHHHHhcCCCEE
Confidence            555555 599999999999999999998764210         0012345565542     2233333333334578999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHH
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGH  109 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~  109 (288)
                      |||||+...  ....+.+++.+++++|....
T Consensus        86 Ih~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         86 IHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            999998652  22345566777777765443

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.46  E-value=6.5e-07  Score=76.81  Aligned_cols=77  Identities=19%  Similarity=0.158  Sum_probs=58.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCCh---HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNM---AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      +|+|| ||+|++++..|++.|++ |++++|+.   ++++++.+++...+  ..+.+..+|+++.+++...++       .
T Consensus       130 lI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~-------~  199 (289)
T PRK12548        130 TVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA-------S  199 (289)
T ss_pred             EEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc-------c
Confidence            58999 69999999999999996 99999997   66777777765543  345566788887766655443       4


Q ss_pred             cceEEEccccC
Q 023054           77 LNILINNAGIM   87 (288)
Q Consensus        77 id~lv~~ag~~   87 (288)
                      .|+||||....
T Consensus       200 ~DilINaTp~G  210 (289)
T PRK12548        200 SDILVNATLVG  210 (289)
T ss_pred             CCEEEEeCCCC
Confidence            69999998553

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.44  E-value=6.4e-06  Score=66.11  Aligned_cols=148  Identities=10%  Similarity=0.074  Sum_probs=96.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKA---HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      +|||++|=+|++|.+.+..+|.   +.++.+..                       .+||++..+.+++++..     ++
T Consensus         5 lVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------------d~DLt~~a~t~~lF~~e-----kP   56 (315)
T KOG1431|consen    5 LVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------------DADLTNLADTRALFESE-----KP   56 (315)
T ss_pred             EEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------------cccccchHHHHHHHhcc-----CC
Confidence            5899999999999999998876   34443321                       37999999999999865     78


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc--cCCccccCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY--KGGIRFQKIN  155 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~--~~~~~~~~~~  155 (288)
                      .+|||.|+..+.... .-....+.+..|+.-.-+.++.+..+-.+         ++|+..|.+- ++.  +..++...+.
T Consensus        57 thVIhlAAmVGGlf~-N~~ynldF~r~Nl~indNVlhsa~e~gv~---------K~vsclStCI-fPdkt~yPIdEtmvh  125 (315)
T KOG1431|consen   57 THVIHLAAMVGGLFH-NNTYNLDFIRKNLQINDNVLHSAHEHGVK---------KVVSCLSTCI-FPDKTSYPIDETMVH  125 (315)
T ss_pred             ceeeehHhhhcchhh-cCCCchHHHhhcceechhHHHHHHHhchh---------hhhhhcceee-cCCCCCCCCCHHHhc
Confidence            899999977654220 11112334555555555666666555433         4666666553 221  1222222333


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccc
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEE  187 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  187 (288)
                      .....+....|+.+|..+.-..++++.+++..
T Consensus       126 ~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~  157 (315)
T KOG1431|consen  126 NGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRD  157 (315)
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHHhCCc
Confidence            44455666779999988887789998888754

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.36  E-value=1.4e-06  Score=77.79  Aligned_cols=68  Identities=22%  Similarity=0.216  Sum_probs=51.1

Q ss_pred             CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccc
Q 023054            6 ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus         6 s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      ||++|+++|+.|+++|++|++++++.. .+         . ...  +..+|+++.+++.+.+.   +.++++|++|||||
T Consensus       213 SG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~-~~~--~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aa  276 (399)
T PRK05579        213 SGKMGYALARAAARRGADVTLVSGPVN-LP---------T-PAG--VKRIDVESAQEMLDAVL---AALPQADIFIMAAA  276 (399)
T ss_pred             cchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------C-CCC--cEEEccCCHHHHHHHHH---HhcCCCCEEEEccc
Confidence            455999999999999999999998752 11         1 111  34679998888776665   44678999999999


Q ss_pred             cCCC
Q 023054           86 IMFC   89 (288)
Q Consensus        86 ~~~~   89 (288)
                      +...
T Consensus       277 v~d~  280 (399)
T PRK05579        277 VADY  280 (399)
T ss_pred             cccc
Confidence            8643

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.35  E-value=3.5e-06  Score=68.03  Aligned_cols=76  Identities=17%  Similarity=0.225  Sum_probs=60.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+||+|++|+.+++.|+++|++|++++|+.++++++.+.+....   ......+|+.+.+++.+.+.       +.|+|
T Consensus        32 lVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~-------~~diV  101 (194)
T cd01078          32 VVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK-------GADVV  101 (194)
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh-------cCCEE
Confidence            589999999999999999999999999999998888877775432   23455678888777766654       56888


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |++...
T Consensus       102 i~at~~  107 (194)
T cd01078         102 FAAGAA  107 (194)
T ss_pred             EECCCC
Confidence            887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.32  E-value=1.2e-05  Score=68.32  Aligned_cols=128  Identities=19%  Similarity=0.089  Sum_probs=88.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||||.+|.+++++|.++|++|++..|+.+.+....         ..+.+...|+.++.++...++       ++|.+
T Consensus         4 lV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~~~~   67 (275)
T COG0702           4 LVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GVDGV   67 (275)
T ss_pred             EEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------cccEE
Confidence            69999999999999999999999999999998876543         358889999999998888776       77888


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ++..+... ...       ..............+...    ..      ..+++.+|+....                 .
T Consensus        68 ~~i~~~~~-~~~-------~~~~~~~~~~~~~a~~a~----~~------~~~~~~~s~~~~~-----------------~  112 (275)
T COG0702          68 LLISGLLD-GSD-------AFRAVQVTAVVRAAEAAG----AG------VKHGVSLSVLGAD-----------------A  112 (275)
T ss_pred             EEEecccc-ccc-------chhHHHHHHHHHHHHHhc----CC------ceEEEEeccCCCC-----------------C
Confidence            88887653 111       112223333333333332    10      2356666665532                 1


Q ss_pred             CccccchhhHHHHHHHHHH
Q 023054          161 SDKKAYGQSKLANILHANE  179 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~  179 (288)
                      .....|..+|...+...++
T Consensus       113 ~~~~~~~~~~~~~e~~l~~  131 (275)
T COG0702         113 ASPSALARAKAAVEAALRS  131 (275)
T ss_pred             CCccHHHHHHHHHHHHHHh
Confidence            2446788888887665554

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.29  E-value=3e-06  Score=74.55  Aligned_cols=74  Identities=24%  Similarity=0.444  Sum_probs=63.1

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||.|+ |+||+.+|+.|+++| .+|++++|+.+++.++....     ..++.++++|+.|.+.+.+++++       .|+
T Consensus         5 lviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------~d~   71 (389)
T COG1748           5 LVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------FDL   71 (389)
T ss_pred             EEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------CCE
Confidence            35566 999999999999999 79999999999988877654     34799999999999999888873       399


Q ss_pred             EEEccccC
Q 023054           80 LINNAGIM   87 (288)
Q Consensus        80 lv~~ag~~   87 (288)
                      |||++...
T Consensus        72 VIn~~p~~   79 (389)
T COG1748          72 VINAAPPF   79 (389)
T ss_pred             EEEeCCch
Confidence            99998764

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.29  E-value=1.7e-06  Score=83.55  Aligned_cols=162  Identities=16%  Similarity=0.174  Sum_probs=121.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCChHHH--H-HHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNMAAA--N-EARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~~~~--~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      +|+||-||.|.+++..|.++|++ +++++|+--+.  + ......++.  +.++.+-.-|++.....+.++++..+ .+.
T Consensus      1772 ii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~~s~k-l~~ 1848 (2376)
T KOG1202|consen 1772 IIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIEESNK-LGP 1848 (2376)
T ss_pred             EEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHHHhhh-ccc
Confidence            58999999999999999999995 88888865321  1 223334444  56666667788888888888887544 578


Q ss_pred             cceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           77 LNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        77 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      +-.++|.|.+...  .++.++++|++.-+..+.++++|-+.-......-       --+|..||+...+           
T Consensus      1849 vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L-------dyFv~FSSvscGR----------- 1910 (2376)
T KOG1202|consen 1849 VGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL-------DYFVVFSSVSCGR----------- 1910 (2376)
T ss_pred             ccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc-------ceEEEEEeecccC-----------
Confidence            8999999998766  3478889999999999999999877766655432       2677778877555           


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccC
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEG  188 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~  188 (288)
                          |..+.+.|+.+..+++.++.- ++..+-.|
T Consensus      1911 ----GN~GQtNYG~aNS~MERiceq-Rr~~GfPG 1939 (2376)
T KOG1202|consen 1911 ----GNAGQTNYGLANSAMERICEQ-RRHEGFPG 1939 (2376)
T ss_pred             ----CCCcccccchhhHHHHHHHHH-hhhcCCCc
Confidence                467889999999999987764 33333333

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.23  E-value=1.9e-05  Score=70.94  Aligned_cols=122  Identities=15%  Similarity=0.208  Sum_probs=84.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCC---EEEEEeCChH---H--------HHHHHHHHHhhCC--CCceEEEEecCCChH---
Q 023054            1 MLAGGASGIGLETARVLALRKA---HVIIAARNMA---A--------ANEARQLILKEDD--TARVDTLKLDLSSIA---   61 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~---~V~~~~r~~~---~--------~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~---   61 (288)
                      +||||||++|+-++..|++.--   ++++.-|.+.   .        .+.+.+.+.+..|  -.++..+..|+++++   
T Consensus        16 ~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~LGi   95 (467)
T KOG1221|consen   16 FVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDLGI   95 (467)
T ss_pred             EEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcccCC
Confidence            5899999999999999998542   6777766431   1        1122333333333  256888889998755   


Q ss_pred             ---HHHHHHHHHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcC
Q 023054           62 ---SIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSS  138 (288)
Q Consensus        62 ---~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  138 (288)
                         +...+.       ..+|+|||+|+.....     +.++..+.+|..|+.++++.+.....-        -..++||+
T Consensus        96 s~~D~~~l~-------~eV~ivih~AAtvrFd-----e~l~~al~iNt~Gt~~~l~lak~~~~l--------~~~vhVST  155 (467)
T KOG1221|consen   96 SESDLRTLA-------DEVNIVIHSAATVRFD-----EPLDVALGINTRGTRNVLQLAKEMVKL--------KALVHVST  155 (467)
T ss_pred             ChHHHHHHH-------hcCCEEEEeeeeeccc-----hhhhhhhhhhhHhHHHHHHHHHHhhhh--------heEEEeeh
Confidence               222222       2689999999976432     446778999999999999988776543        26889998


Q ss_pred             cccc
Q 023054          139 IAHQ  142 (288)
Q Consensus       139 ~~~~  142 (288)
                      ....
T Consensus       156 Ay~n  159 (467)
T KOG1221|consen  156 AYSN  159 (467)
T ss_pred             hhee
Confidence            7655

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.20  E-value=3.3e-05  Score=68.32  Aligned_cols=205  Identities=15%  Similarity=0.063  Sum_probs=114.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHH-HHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI-KDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~-~~~~~~~~~~~~~id~   79 (288)
                      +|+||+|++|+-+++.|.++|+.|..+-|+.+..+.... +...  ......+..|.....+. ..+++..   .-...+
T Consensus        83 lVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~--d~~~~~v~~~~~~~~d~~~~~~~~~---~~~~~~  156 (411)
T KOG1203|consen   83 LVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFV--DLGLQNVEADVVTAIDILKKLVEAV---PKGVVI  156 (411)
T ss_pred             EEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cccc--ccccceeeeccccccchhhhhhhhc---ccccee
Confidence            589999999999999999999999999999988777665 1111  22344555555543333 2222221   113556


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ++-++|.....+     +...-..+.+.|..++++++...-.         -|++++||+.+...              .
T Consensus       157 v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~aGv---------k~~vlv~si~~~~~--------------~  208 (411)
T KOG1203|consen  157 VIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKAGV---------KRVVLVGSIGGTKF--------------N  208 (411)
T ss_pred             EEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHhCC---------ceEEEEEeecCccc--------------C
Confidence            677766543322     3344456778899999999844332         38999999876542              1


Q ss_pred             CCccccchhhHHHHHHHH-HHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHHHHHHHHHhh--hcCChHHHHHHH
Q 023054          160 YSDKKAYGQSKLANILHA-NELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVMRFLKFFSFF--LWKNVPQGAATT  234 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~-~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~--~~~~~~~~a~~~  234 (288)
                      .+++..+.   .+...-. +.....+...|  +.-..|.||....+.....  .............  ...+-.++|+..
T Consensus       209 ~~~~~~~~---~~~~~~~k~~~e~~~~~Sg--l~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~  283 (411)
T KOG1203|consen  209 QPPNILLL---NGLVLKAKLKAEKFLQDSG--LPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELV  283 (411)
T ss_pred             CCchhhhh---hhhhhHHHHhHHHHHHhcC--CCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHH
Confidence            11111111   1111111 22334445566  6677789988865433211  0000000000011  133456788888


Q ss_pred             HHHhcCCCcc
Q 023054          235 CYVALHPNLK  244 (288)
Q Consensus       235 ~~l~~~~~~~  244 (288)
                      +.++..+...
T Consensus       284 ~~all~~~~~  293 (411)
T KOG1203|consen  284 AKALLNEAAT  293 (411)
T ss_pred             HHHHhhhhhc
Confidence            8777644433

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.14  E-value=8.4e-06  Score=73.09  Aligned_cols=75  Identities=27%  Similarity=0.429  Sum_probs=59.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      +|.|| |.+|+.+++.|++++-  +|++.+|+.++++++.+++    ...++.++++|+.|.+++.++++       ..|
T Consensus         2 lvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~d   69 (386)
T PF03435_consen    2 LVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GCD   69 (386)
T ss_dssp             EEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TSS
T ss_pred             EEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cCC
Confidence            57899 9999999999999874  7999999999988887765    25789999999999999888776       569


Q ss_pred             eEEEccccC
Q 023054           79 ILINNAGIM   87 (288)
Q Consensus        79 ~lv~~ag~~   87 (288)
                      +|||++|..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999999875

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN00106 malate dehydrogenase

Probab=98.14  E-value=1.1e-05  Score=69.91  Aligned_cols=156  Identities=12%  Similarity=0.076  Sum_probs=97.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      .|||++|.||..++..|+.++.  .++++++++  .+.....+....  .  .....++++.+++.+.+       .+.|
T Consensus        22 ~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~--~--~~~i~~~~~~~d~~~~l-------~~aD   88 (323)
T PLN00106         22 AVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHIN--T--PAQVRGFLGDDQLGDAL-------KGAD   88 (323)
T ss_pred             EEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCC--c--CceEEEEeCCCCHHHHc-------CCCC
Confidence            4899999999999999997765  799999987  221122222221  1  11223443333333322       3789


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc----cccccCCccccCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH----QYTYKGGIRFQKI  154 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~----~~~~~~~~~~~~~  154 (288)
                      +||+.||.....    ...+++.+..|+.....+.+.+.++-.        .+.|+++|-+.-    .+.       ..+
T Consensus        89 iVVitAG~~~~~----g~~R~dll~~N~~i~~~i~~~i~~~~p--------~aivivvSNPvD~~~~i~t-------~~~  149 (323)
T PLN00106         89 LVIIPAGVPRKP----GMTRDDLFNINAGIVKTLCEAVAKHCP--------NALVNIISNPVNSTVPIAA-------EVL  149 (323)
T ss_pred             EEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHCC--------CeEEEEeCCCccccHHHHH-------HHH
Confidence            999999986432    244677788887776666555544431        234444444442    111       112


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccC
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEG  188 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~  188 (288)
                      ....++++...||.++.-...|-..++.+++..-
T Consensus       150 ~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~~  183 (323)
T PLN00106        150 KKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLDP  183 (323)
T ss_pred             HHcCCCCcceEEEEecchHHHHHHHHHHHhCCCh
Confidence            2334678888999998777789999999988664

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.13  E-value=9.4e-05  Score=57.69  Aligned_cols=191  Identities=12%  Similarity=0.064  Sum_probs=113.8

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      |.||||-+|..|+++..++|+.|+.+.||+.+....          ..+..++.|+.|++++...+.       +.|+||
T Consensus         5 iIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~DaVI   67 (211)
T COG2910           5 IIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GHDAVI   67 (211)
T ss_pred             EEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CCceEE
Confidence            789999999999999999999999999998875432          246788999999888755543       789999


Q ss_pred             EccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCCC
Q 023054           82 NNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYS  161 (288)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  161 (288)
                      ..-|...+.    .+  +..        ..-.++++..++.+.     ..|+++|+...+....++ ...-+   ...+ 
T Consensus        68 sA~~~~~~~----~~--~~~--------~k~~~~li~~l~~ag-----v~RllVVGGAGSL~id~g-~rLvD---~p~f-  123 (211)
T COG2910          68 SAFGAGASD----ND--ELH--------SKSIEALIEALKGAG-----VPRLLVVGGAGSLEIDEG-TRLVD---TPDF-  123 (211)
T ss_pred             EeccCCCCC----hh--HHH--------HHHHHHHHHHHhhcC-----CeeEEEEcCccceEEcCC-ceeec---CCCC-
Confidence            888765321    11  111        111555666665544     579999999887765444 11111   1111 


Q ss_pred             ccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHHH-HHHHHHhhhcCChHHHHHHHHHHh
Q 023054          162 DKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVMR-FLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       162 ~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~-~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                      +...|..+++..+ +.+.|..+   .+  +...-|+|..+..|--+.-  ..... +...-......+.+|.|-+++.-+
T Consensus       124 P~ey~~~A~~~ae-~L~~Lr~~---~~--l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~  197 (211)
T COG2910         124 PAEYKPEALAQAE-FLDSLRAE---KS--LDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDEL  197 (211)
T ss_pred             chhHHHHHHHHHH-HHHHHhhc---cC--cceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHH
Confidence            2233455544422 23334433   22  5566688877766522111  00000 000000112247789999998888


Q ss_pred             c
Q 023054          239 L  239 (288)
Q Consensus       239 ~  239 (288)
                      .
T Consensus       198 E  198 (211)
T COG2910         198 E  198 (211)
T ss_pred             h
Confidence            5

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.09  E-value=1.1e-05  Score=65.51  Aligned_cols=180  Identities=15%  Similarity=0.140  Sum_probs=114.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH-HHHHh---hCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEAR-QLILK---EDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      ||||-+|.=|.-++..|+.+|+.|..+-|+........ +.+-.   ...++++...-.|++|...+..+++.+     +
T Consensus        32 LITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-----k  106 (376)
T KOG1372|consen   32 LITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-----K  106 (376)
T ss_pred             EEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-----C
Confidence            69999999999999999999999999988665433211 11111   112567888889999999999999987     7


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ++-+.|.|+...-.  ++-|-.+-+-++...|++.|+.++...-...      +-++--.|+.. .++   ....-+-.+
T Consensus       107 PtEiYnLaAQSHVk--vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~------~VrfYQAstSE-lyG---kv~e~PQsE  174 (376)
T KOG1372|consen  107 PTEVYNLAAQSHVK--VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE------KVRFYQASTSE-LYG---KVQEIPQSE  174 (376)
T ss_pred             chhhhhhhhhcceE--EEeecccceeeccchhhhhHHHHHHhcCccc------ceeEEecccHh-hcc---cccCCCccc
Confidence            88888888765432  2223234455677889999888886543332      23444444432 221   112222234


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcc---cCCceEEEEeeCC
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQE---EGVNITANSVHPG  199 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~---~~~~i~v~~v~PG  199 (288)
                      ..++.+.++|+++|....=++-.++..+..   .|  |-+|.=+|-
T Consensus       175 ~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNG--ILFNHESPR  218 (376)
T KOG1372|consen  175 TTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNG--ILFNHESPR  218 (376)
T ss_pred             CCCCCCCChhHHhhhhheEEEEEhHHhhcceeecc--EeecCCCCc
Confidence            455667789999998744333333443332   34  666666653

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.02  E-value=1.3e-05  Score=71.33  Aligned_cols=96  Identities=14%  Similarity=0.146  Sum_probs=62.3

Q ss_pred             CCh-hHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHH-HHHHHHHHhcCCCcceEEEc
Q 023054            6 ASG-IGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI-KDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         6 s~g-IG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~-~~~~~~~~~~~~~id~lv~~   83 (288)
                      |+| +|.++|+.|+.+|++|+++.++....          . ...  ...+|+++.+++ ++++++.   .+.+|++|+|
T Consensus       209 SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~--~~~~~v~~~~~~~~~~~~~~---~~~~D~~i~~  272 (390)
T TIGR00521       209 SSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPG--VKSIKVSTAEEMLEAALNEL---AKDFDIFISA  272 (390)
T ss_pred             CcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCC--cEEEEeccHHHHHHHHHHhh---cccCCEEEEc
Confidence            666 99999999999999999988765321          1 222  256799998888 5555443   4679999999


Q ss_pred             cccCCCCC-CCCC---CcchhhhhhhhhHHHHHHHhhH
Q 023054           84 AGIMFCPY-QISE---DGIEMQFATNHIGHFLLTNLLL  117 (288)
Q Consensus        84 ag~~~~~~-~~~~---~~~~~~~~~n~~~~~~l~~~~~  117 (288)
                      ||+..... ....   +...+.+.+|+.-+--++..+.
T Consensus       273 Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       273 AAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             cccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence            99864421 1111   1112344566665555555554

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.00  E-value=2.1e-05  Score=67.24  Aligned_cols=81  Identities=17%  Similarity=0.179  Sum_probs=69.0

Q ss_pred             CcccCCChhHHHHHHHHHH----CCCEEEEEeCChHHHHHHHHHHHhhCCC--CceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            1 MLAGGASGIGLETARVLAL----RKAHVIIAARNMAAANEARQLILKEDDT--ARVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~----~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      +|-||||.-|.-++.++.+    .|..+.+.+||++++++.++++.++.+.  .+...+.||.+|++++.+++..     
T Consensus         9 VIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~-----   83 (423)
T KOG2733|consen    9 VIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ-----   83 (423)
T ss_pred             EEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh-----
Confidence            5789999999999999999    7889999999999999999999876532  2233778999999999999874     


Q ss_pred             CCcceEEEccccCC
Q 023054           75 LPLNILINNAGIMF   88 (288)
Q Consensus        75 ~~id~lv~~ag~~~   88 (288)
                        ..+||||+|...
T Consensus        84 --~~vivN~vGPyR   95 (423)
T KOG2733|consen   84 --ARVIVNCVGPYR   95 (423)
T ss_pred             --hEEEEeccccce
Confidence              478999999753

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.89  E-value=9e-05  Score=59.97  Aligned_cols=156  Identities=16%  Similarity=0.185  Sum_probs=101.2

Q ss_pred             CcccCCChhHHHHHHHHHHC-CC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR-KA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      ||||+-|.+|..+|..|-.+ |. +|++-+..+...     .....     =-++-.|+.|.+++++++-     ..+||
T Consensus        48 LITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-----~V~~~-----GPyIy~DILD~K~L~eIVV-----n~RId  112 (366)
T KOG2774|consen   48 LITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-----NVTDV-----GPYIYLDILDQKSLEEIVV-----NKRID  112 (366)
T ss_pred             EEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-----hhccc-----CCchhhhhhccccHHHhhc-----ccccc
Confidence            69999999999999988754 54 566655433221     11111     1245678888888777653     23899


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      .+||..+..+.   +.+....-..++|+.|..++++....+-          -++.+-|.+.+..+.   ...++-+...
T Consensus       113 WL~HfSALLSA---vGE~NVpLA~~VNI~GvHNil~vAa~~k----------L~iFVPSTIGAFGPt---SPRNPTPdlt  176 (366)
T KOG2774|consen  113 WLVHFSALLSA---VGETNVPLALQVNIRGVHNILQVAAKHK----------LKVFVPSTIGAFGPT---SPRNPTPDLT  176 (366)
T ss_pred             eeeeHHHHHHH---hcccCCceeeeecchhhhHHHHHHHHcC----------eeEeecccccccCCC---CCCCCCCCee
Confidence            99998775432   2344556678899999999988876653          245545555444331   1112222233


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccc
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEE  187 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  187 (288)
                      -..+.+.||+||.-.+.+.+.+-.+++.+
T Consensus       177 IQRPRTIYGVSKVHAEL~GEy~~hrFg~d  205 (366)
T KOG2774|consen  177 IQRPRTIYGVSKVHAELLGEYFNHRFGVD  205 (366)
T ss_pred             eecCceeechhHHHHHHHHHHHHhhcCcc
Confidence            34566889999999999888888887754

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.88  E-value=8.3e-05  Score=64.51  Aligned_cols=163  Identities=14%  Similarity=0.086  Sum_probs=94.4

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      .|||++|.||..++..|+.++  ..+++++++..  +.....+....  .  .+...+.+|..+..+.+       .+.|
T Consensus        12 ~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~--~g~a~Dl~~~~--~--~~~v~~~td~~~~~~~l-------~gaD   78 (321)
T PTZ00325         12 AVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA--PGVAADLSHID--T--PAKVTGYADGELWEKAL-------RGAD   78 (321)
T ss_pred             EEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC--cccccchhhcC--c--CceEEEecCCCchHHHh-------CCCC
Confidence            489999999999999999665  47999999322  21122222221  1  22344666544422222       3689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCc-cccccccCCccccCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSI-AHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~-~~~~~~~~~~~~~~~~~~  157 (288)
                      +||+++|.....    .+.+.+.+..|+...-.+.+.+.++    .     .-++|+++|. .-.+.+..   ...+...
T Consensus        79 vVVitaG~~~~~----~~tR~dll~~N~~i~~~i~~~i~~~----~-----~~~iviv~SNPvdv~~~~~---~~~~~~~  142 (321)
T PTZ00325         79 LVLICAGVPRKP----GMTRDDLFNTNAPIVRDLVAAVASS----A-----PKAIVGIVSNPVNSTVPIA---AETLKKA  142 (321)
T ss_pred             EEEECCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHH----C-----CCeEEEEecCcHHHHHHHH---Hhhhhhc
Confidence            999999975331    2346677777776666666655443    2     2366666663 22221000   0011234


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceE
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNIT  192 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~  192 (288)
                      .++++...||.+-.=-..|-..+++.+.-....|+
T Consensus       143 sg~p~~~viG~g~LDs~R~r~~la~~l~v~~~~V~  177 (321)
T PTZ00325        143 GVYDPRKLFGVTTLDVVRARKFVAEALGMNPYDVN  177 (321)
T ss_pred             cCCChhheeechhHHHHHHHHHHHHHhCcChhheE
Confidence            56788889999732223466777777765533343

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.79  E-value=0.00011  Score=55.56  Aligned_cols=71  Identities=20%  Similarity=0.255  Sum_probs=51.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|+ ||.|++++..|++.|++ |++++|+.++++++.+.+.    +..+.++  ++.+..   +...       ..|+
T Consensus        16 lviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~----~~~~~~~--~~~~~~---~~~~-------~~Di   78 (135)
T PF01488_consen   16 LVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG----GVNIEAI--PLEDLE---EALQ-------EADI   78 (135)
T ss_dssp             EEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT----GCSEEEE--EGGGHC---HHHH-------TESE
T ss_pred             EEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC----cccccee--eHHHHH---HHHh-------hCCe
Confidence            35665 99999999999999986 9999999999998888771    2334444  333322   2222       6799


Q ss_pred             EEEccccCC
Q 023054           80 LINNAGIMF   88 (288)
Q Consensus        80 lv~~ag~~~   88 (288)
                      ||++.+...
T Consensus        79 vI~aT~~~~   87 (135)
T PF01488_consen   79 VINATPSGM   87 (135)
T ss_dssp             EEE-SSTTS
T ss_pred             EEEecCCCC
Confidence            999987653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.70  E-value=0.00018  Score=62.74  Aligned_cols=117  Identities=9%  Similarity=-0.031  Sum_probs=64.3

Q ss_pred             CcccCCChhHHHHHHHHHHCC-------CEEEEEeCChHH--HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRK-------AHVIIAARNMAA--ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFI   71 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (288)
                      +||||+|.||.+++..|+..+       ..|+++++++..  ++.....+...     ......|+....+       +.
T Consensus         6 ~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-----~~~~~~~~~~~~~-------~~   73 (325)
T cd01336           6 LVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-----AFPLLKSVVATTD-------PE   73 (325)
T ss_pred             EEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-----cccccCCceecCC-------HH
Confidence            489999999999999999854       589999996531  11111111100     0000112222122       11


Q ss_pred             hcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           72 ALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      +...+.|+|||+||.....    ...-.+.+..|+.    +.+.+.+.+.+..   ++.+.++++|.+.
T Consensus        74 ~~l~~aDiVI~tAG~~~~~----~~~R~~l~~~N~~----i~~~i~~~i~~~~---~~~~iiivvsNPv  131 (325)
T cd01336          74 EAFKDVDVAILVGAMPRKE----GMERKDLLKANVK----IFKEQGEALDKYA---KKNVKVLVVGNPA  131 (325)
T ss_pred             HHhCCCCEEEEeCCcCCCC----CCCHHHHHHHHHH----HHHHHHHHHHHhC---CCCeEEEEecCcH
Confidence            2234799999999986432    1223556665544    4444544444431   0146788888754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.48  E-value=0.0023  Score=48.75  Aligned_cols=113  Identities=14%  Similarity=0.144  Sum_probs=70.9

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCC--CceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDT--ARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|++|.+|.+++..|...+.  ++++++++++.++.....+....+.  ........|..+              ....
T Consensus         5 IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~--------------~~~a   70 (141)
T PF00056_consen    5 IIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEA--------------LKDA   70 (141)
T ss_dssp             EESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGG--------------GTTE
T ss_pred             EECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccc--------------cccc
Confidence            789999999999999999875  7999999988877766666553211  222333322221              1268


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      |++|..||.....    .+.-.+.+..|..    +.+.+.+.+.+..    +.+.+++++-+.
T Consensus        71 Divvitag~~~~~----g~sR~~ll~~N~~----i~~~~~~~i~~~~----p~~~vivvtNPv  121 (141)
T PF00056_consen   71 DIVVITAGVPRKP----GMSRLDLLEANAK----IVKEIAKKIAKYA----PDAIVIVVTNPV  121 (141)
T ss_dssp             SEEEETTSTSSST----TSSHHHHHHHHHH----HHHHHHHHHHHHS----TTSEEEE-SSSH
T ss_pred             cEEEEeccccccc----cccHHHHHHHhHh----HHHHHHHHHHHhC----CccEEEEeCCcH
Confidence            9999999976431    1224455555544    4444444444432    156777776654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK09620 hypothetical protein; Provisional

Probab=97.42  E-value=0.00011  Score=60.72  Aligned_cols=25  Identities=32%  Similarity=0.246  Sum_probs=22.7

Q ss_pred             CChhHHHHHHHHHHCCCEEEEEeCC
Q 023054            6 ASGIGLETARVLALRKAHVIIAARN   30 (288)
Q Consensus         6 s~gIG~~ia~~La~~G~~V~~~~r~   30 (288)
                      ||.||+++|++|.++|++|+++++.
T Consensus        28 SGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620         28 KGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            4999999999999999999988764

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.40  E-value=0.0029  Score=54.64  Aligned_cols=142  Identities=16%  Similarity=0.198  Sum_probs=81.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+++++|.++++.+...|++|++++++++..+.+. .+     +..   ..+|..+.+..+.+.+...  ..++|.+
T Consensus       149 lI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v  217 (325)
T cd08253         149 LVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-----GAD---AVFNYRAEDLADRILAATA--GQGVDVI  217 (325)
T ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCcCHHHHHHHHcC--CCceEEE
Confidence            58999999999999999999999999999887655542 22     221   1245555555555433221  2369999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC-CCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK-INDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~-~~~~~~  159 (288)
                      ++++|...         .               ......+..       .|+++.+++....    ....... +.....
T Consensus       218 i~~~~~~~---------~---------------~~~~~~l~~-------~g~~v~~~~~~~~----~~~~~~~~~~~~~~  262 (325)
T cd08253         218 IEVLANVN---------L---------------AKDLDVLAP-------GGRIVVYGSGGLR----GTIPINPLMAKEAS  262 (325)
T ss_pred             EECCchHH---------H---------------HHHHHhhCC-------CCEEEEEeecCCc----CCCChhHHHhcCce
Confidence            99887310         0               000112222       5899988774311    0111111 111112


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccC
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEG  188 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~  188 (288)
                      ......|..+|..+..+.+.+...+....
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (325)
T cd08253         263 IRGVLLYTATPEERAAAAEAIAAGLADGA  291 (325)
T ss_pred             EEeeehhhcCHHHHHHHHHHHHHHHHCCC
Confidence            23334566777777777777766655544

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.38  E-value=0.00063  Score=59.32  Aligned_cols=67  Identities=18%  Similarity=0.207  Sum_probs=48.3

Q ss_pred             CcccCCChhHHHHHHHHHHC-C-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR-K-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      +||||+|.||+.+|++|+++ | .+|++++|+.+++..+..++..           .|+.+   +.+       .....|
T Consensus       159 LVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----------~~i~~---l~~-------~l~~aD  217 (340)
T PRK14982        159 AVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----------GKILS---LEE-------ALPEAD  217 (340)
T ss_pred             EEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----------ccHHh---HHH-------HHccCC
Confidence            58999999999999999864 5 4899999998877766554321           12221   221       223689


Q ss_pred             eEEEccccCC
Q 023054           79 ILINNAGIMF   88 (288)
Q Consensus        79 ~lv~~ag~~~   88 (288)
                      +|||+++...
T Consensus       218 iVv~~ts~~~  227 (340)
T PRK14982        218 IVVWVASMPK  227 (340)
T ss_pred             EEEECCcCCc
Confidence            9999998754

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.38  E-value=0.0005  Score=62.93  Aligned_cols=70  Identities=16%  Similarity=0.231  Sum_probs=51.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|+|+++ +|.++|+.|+++|++|++++++. +..++..+++...    .+.++..|..+            +..+.+|+
T Consensus         9 ~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~------------~~~~~~d~   71 (450)
T PRK14106          9 LVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPE------------EFLEGVDL   71 (450)
T ss_pred             EEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcch------------hHhhcCCE
Confidence            4788777 99999999999999999999975 4444444444332    35677778776            11246899


Q ss_pred             EEEccccC
Q 023054           80 LINNAGIM   87 (288)
Q Consensus        80 lv~~ag~~   87 (288)
                      ||+++|+.
T Consensus        72 vv~~~g~~   79 (450)
T PRK14106         72 VVVSPGVP   79 (450)
T ss_pred             EEECCCCC
Confidence            99999975

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.36  E-value=0.00098  Score=51.77  Aligned_cols=152  Identities=13%  Similarity=0.085  Sum_probs=91.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      +|.||||-.|..+.+++++++.  +|+++.|++..-..+         +..+.-...|.+.+++...       ...++|
T Consensus        22 fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl~~~a~-------~~qg~d   85 (238)
T KOG4039|consen   22 FVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKLSQLAT-------NEQGPD   85 (238)
T ss_pred             EEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHHHHHHh-------hhcCCc
Confidence            4789999999999999999985  799999985321111         3345666678776544333       234899


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +++++-|.....     .+.+..+.+..--.+.+.+..    +..+     --.++.+||..+.                
T Consensus        86 V~FcaLgTTRgk-----aGadgfykvDhDyvl~~A~~A----Ke~G-----ck~fvLvSS~GAd----------------  135 (238)
T KOG4039|consen   86 VLFCALGTTRGK-----AGADGFYKVDHDYVLQLAQAA----KEKG-----CKTFVLVSSAGAD----------------  135 (238)
T ss_pred             eEEEeecccccc-----cccCceEeechHHHHHHHHHH----HhCC-----CeEEEEEeccCCC----------------
Confidence            999998875432     122333333333333333322    2211     2468889997654                


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFK  207 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~  207 (288)
                       ......|-..|--++.=+    .++.-+    ++..+.||++..+...
T Consensus       136 -~sSrFlY~k~KGEvE~~v----~eL~F~----~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  136 -PSSRFLYMKMKGEVERDV----IELDFK----HIIILRPGPLLGERTE  175 (238)
T ss_pred             -cccceeeeeccchhhhhh----hhcccc----EEEEecCcceeccccc
Confidence             234456766665544322    233332    4666899999765544

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.25  E-value=0.00061  Score=58.06  Aligned_cols=74  Identities=19%  Similarity=0.219  Sum_probs=58.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|-||+|..|.-+|++|+++|.+..+.+||..++..+...+     +.+...+.++  +++.+.+.++       ..++|
T Consensus        10 iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~--~p~~~~~~~~-------~~~VV   75 (382)
T COG3268          10 IIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLG--VPAALEAMAS-------RTQVV   75 (382)
T ss_pred             EEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCC--CHHHHHHHHh-------cceEE
Confidence            57899999999999999999999999999999999888877     3334444333  3666666555       57899


Q ss_pred             EEccccCC
Q 023054           81 INNAGIMF   88 (288)
Q Consensus        81 v~~ag~~~   88 (288)
                      +||+|...
T Consensus        76 lncvGPyt   83 (382)
T COG3268          76 LNCVGPYT   83 (382)
T ss_pred             Eecccccc
Confidence            99999753

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.24  E-value=0.001  Score=57.99  Aligned_cols=160  Identities=9%  Similarity=-0.024  Sum_probs=95.4

Q ss_pred             cccCCChhHHHHHHHHHHCCC-------EEEEEeCChHH--HHHHHHHHHhhC-CC-CceEEEEecCCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKA-------HVIIAARNMAA--ANEARQLILKED-DT-ARVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |+|++|.||..++..|+..|.       .+++++.++..  ++.....+.... +- .++.+   .-.+       .+  
T Consensus         7 IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~-------~~--   74 (322)
T cd01338           7 VTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDP-------NV--   74 (322)
T ss_pred             EECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCc-------HH--
Confidence            789999999999999998875       69999985432  333333332211 10 01111   1011       11  


Q ss_pred             HhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcc
Q 023054           71 IALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIR  150 (288)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  150 (288)
                        .....|++|.+||.....    .+.-.+.+..|    ..+.+.+.+.+.+...   +.+.|+++|-+.-.+.      
T Consensus        75 --~~~daDivvitaG~~~k~----g~tR~dll~~N----~~i~~~i~~~i~~~~~---~~~iiivvsNPvD~~t------  135 (322)
T cd01338          75 --AFKDADWALLVGAKPRGP----GMERADLLKAN----GKIFTAQGKALNDVAS---RDVKVLVVGNPCNTNA------  135 (322)
T ss_pred             --HhCCCCEEEEeCCCCCCC----CCcHHHHHHHH----HHHHHHHHHHHHhhCC---CCeEEEEecCcHHHHH------
Confidence              123689999999985331    12233444544    4455666666655320   1467777776442221      


Q ss_pred             ccCCCCCC-CCCccccchhhHHHHHHHHHHHHHHhcccCCceEE
Q 023054          151 FQKINDRA-GYSDKKAYGQSKLANILHANELSRRFQEEGVNITA  193 (288)
Q Consensus       151 ~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v  193 (288)
                       .-+.... ++++...|+.++.--..|...+++.++..-..|+.
T Consensus       136 -~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         136 -LIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             -HHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence             0011223 37788899999999999999999998876544664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.19  E-value=0.0018  Score=56.53  Aligned_cols=115  Identities=10%  Similarity=0.033  Sum_probs=69.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-------EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHH--HH--HH
Q 023054            1 MLAGGASGIGLETARVLALRKA-------HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKD--FA--QN   69 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~--~~--~~   69 (288)
                      .|+||+|.+|..++..|+..|.       .++++++++..              ........|+.|......  ..  ..
T Consensus         3 ~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         3 VVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             EEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceeccCC
Confidence            4899999999999999998654       59999986532              113344566666552110  00  01


Q ss_pred             HHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           70 FIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      ..+.....|+||+.||....    ..+...+.+..|+    .+.+.+.+.+.+..   ++.+.|+++|-+.
T Consensus        69 ~~~~~~~aDiVVitAG~~~~----~~~tr~~ll~~N~----~i~k~i~~~i~~~~---~~~~iiivvsNPv  128 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPRK----EGMERRDLLSKNV----KIFKEQGRALDKLA---KKDCKVLVVGNPA  128 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCCC----CCCcHHHHHHHHH----HHHHHHHHHHHhhC---CCCeEEEEeCCcH
Confidence            12234579999999997533    1233455655554    45555555555431   0146788877654

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd00704 MDH Malate dehydrogenase

Probab=97.16  E-value=0.0029  Score=55.15  Aligned_cols=115  Identities=12%  Similarity=0.052  Sum_probs=67.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-------EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHH----HHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKA-------HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIK----DFAQN   69 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~----~~~~~   69 (288)
                      .||||+|.||..++..|+..|.       .++++++++..              ........|+.|.....    .+...
T Consensus         4 ~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--------------~~~~g~~~Dl~d~~~~~~~~~~i~~~   69 (323)
T cd00704           4 LITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--------------KALEGVVMELQDCAFPLLKGVVITTD   69 (323)
T ss_pred             EEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--------------CccceeeeehhhhcccccCCcEEecC
Confidence            4899999999999999998663       49999987620              11333445555542000    00011


Q ss_pred             HHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           70 FIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      ..+.....|+||+.||.....    .+.-.+.+..|    ..+.+.+.+.+.+..   ++.+.++++|-+.
T Consensus        70 ~~~~~~~aDiVVitAG~~~~~----g~tR~dll~~N----~~i~~~i~~~i~~~~---~~~~iiivvsNPv  129 (323)
T cd00704          70 PEEAFKDVDVAILVGAFPRKP----GMERADLLRKN----AKIFKEQGEALNKVA---KPTVKVLVVGNPA  129 (323)
T ss_pred             hHHHhCCCCEEEEeCCCCCCc----CCcHHHHHHHh----HHHHHHHHHHHHHhC---CCCeEEEEeCCcH
Confidence            122335799999999986432    12234455544    445566666665541   0156777776544

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.14  E-value=0.0074  Score=52.56  Aligned_cols=74  Identities=18%  Similarity=0.286  Sum_probs=52.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+++++|.++++.+...|++|+++++++++.+.+. .+     +..   ...|..+.+....+.+...  ..++|++
T Consensus       171 lI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~-----~~~---~~~~~~~~~~~~~~~~~~~--~~~~d~~  239 (342)
T cd08266         171 LVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-EL-----GAD---YVIDYRKEDFVREVRELTG--KRGVDVV  239 (342)
T ss_pred             EEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCC---eEEecCChHHHHHHHHHhC--CCCCcEE
Confidence            58999999999999999999999999999887655432 21     221   1246666555555544332  2369999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      ++++|
T Consensus       240 i~~~g  244 (342)
T cd08266         240 VEHVG  244 (342)
T ss_pred             EECCc
Confidence            99987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.09  E-value=0.0024  Score=54.30  Aligned_cols=69  Identities=20%  Similarity=0.314  Sum_probs=49.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+...+   .+.....|     .   .      .....|+|
T Consensus       121 liiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~---~~~~~~~~-----~---~------~~~~~Div  182 (270)
T TIGR00507       121 LIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG---EIQAFSMD-----E---L------PLHRVDLI  182 (270)
T ss_pred             EEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC---ceEEechh-----h---h------cccCccEE
Confidence            47887 699999999999999999999999988888777764321   12222111     1   0      11358999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      |++.+..
T Consensus       183 Inatp~g  189 (270)
T TIGR00507       183 INATSAG  189 (270)
T ss_pred             EECCCCC
Confidence            9999764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.07  E-value=0.0024  Score=49.29  Aligned_cols=70  Identities=16%  Similarity=0.255  Sum_probs=49.7

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|+|+ |++|.++++.|.+.| .+|++++|+.++.++..+++...+       +..+..+....          ....|+
T Consensus        23 ~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~----------~~~~Dv   84 (155)
T cd01065          23 LILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-------IAIAYLDLEEL----------LAEADL   84 (155)
T ss_pred             EEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------cceeecchhhc----------cccCCE
Confidence            36776 899999999999996 789999999988877776653221       22333443222          246899


Q ss_pred             EEEccccCC
Q 023054           80 LINNAGIMF   88 (288)
Q Consensus        80 lv~~ag~~~   88 (288)
                      ||++.....
T Consensus        85 vi~~~~~~~   93 (155)
T cd01065          85 IINTTPVGM   93 (155)
T ss_pred             EEeCcCCCC
Confidence            999987643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.99  E-value=0.0077  Score=52.23  Aligned_cols=152  Identities=13%  Similarity=0.150  Sum_probs=86.0

Q ss_pred             cccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |.|+ |++|.+++..|+..|  .+|++++++++.++.....+.....  ........   .+.+       .+    ...
T Consensus         5 IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~-------~l----~~a   69 (306)
T cd05291           5 IIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS-------DC----KDA   69 (306)
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH-------Hh----CCC
Confidence            5675 999999999999999  4899999999888877777654321  11222221   2221       11    368


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |++|+++|.....    .+.-.+.+..|    ..+++...+.+.+...    .+.|+++|-+.-.+...       +...
T Consensus        70 DIVIitag~~~~~----g~~R~dll~~N----~~i~~~~~~~i~~~~~----~~~vivvsNP~d~~~~~-------~~~~  130 (306)
T cd05291          70 DIVVITAGAPQKP----GETRLDLLEKN----AKIMKSIVPKIKASGF----DGIFLVASNPVDVITYV-------VQKL  130 (306)
T ss_pred             CEEEEccCCCCCC----CCCHHHHHHHH----HHHHHHHHHHHHHhCC----CeEEEEecChHHHHHHH-------HHHH
Confidence            9999999975432    12223444444    4455555555554321    57788888765443200       0011


Q ss_pred             CCCCccccchhhHH-HHHHHHHHHHHHhccc
Q 023054          158 AGYSDKKAYGQSKL-ANILHANELSRRFQEE  187 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~-a~~~~~~~la~~~~~~  187 (288)
                      .++++...++..-. --..+-..+++.++-.
T Consensus       131 ~g~p~~~v~g~gt~LDs~R~~~~la~~l~v~  161 (306)
T cd05291         131 SGLPKNRVIGTGTSLDTARLRRALAEKLNVD  161 (306)
T ss_pred             hCcCHHHEeeccchHHHHHHHHHHHHHHCCC
Confidence            23444444444221 1334555666666644

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.96  E-value=0.0093  Score=64.82  Aligned_cols=171  Identities=13%  Similarity=0.073  Sum_probs=105.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|++..++++.+++..|.++|+.|+++.....    ..... ... ...+..+.+.-.|..++..+++.+....+.++.+
T Consensus      1759 ~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 1832 (2582)
T TIGR02813      1759 LVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSA-SPL-ASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDGF 1832 (2582)
T ss_pred             EEEcCCcchHHHHHHHHHhCCCeEEEeecccc----ccccc-ccc-ccccccccccccchHHHHHHHHhhhccccccceE
Confidence            35666888999999999999999887742211    00000 000 1223344555556778888888887777889999


Q ss_pred             EEccccCCCCC-CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ||..+...... ..+...+...-...+...|.+.|.+.+.+....     .+.++.|+...|..+               
T Consensus      1833 i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~-----~~~~~~vsr~~G~~g--------------- 1892 (2582)
T TIGR02813      1833 IHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNA-----RASFVTVSRIDGGFG--------------- 1892 (2582)
T ss_pred             EEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccCC-----CeEEEEEEecCCccc---------------
Confidence            99877553211 111111122222344556777777766554322     467888888765543               


Q ss_pred             CCcccc--------chhhHHHHHHHHHHHHHHhcccCCceEEEEeeCC
Q 023054          160 YSDKKA--------YGQSKLANILHANELSRRFQEEGVNITANSVHPG  199 (288)
Q Consensus       160 ~~~~~~--------Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG  199 (288)
                      +.....        -....+++.+|+|+++.||..-.  +|...+.|.
T Consensus      1893 ~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~--~r~vDl~~~ 1938 (2582)
T TIGR02813      1893 YSNGDADSGTQQVKAELNQAALAGLTKTLNHEWNAVF--CRALDLAPK 1938 (2582)
T ss_pred             cCCccccccccccccchhhhhHHHHHHhHHHHCCCCe--EEEEeCCCC
Confidence            111111        12357899999999999998766  788888775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK05086 malate dehydrogenase; Provisional

Probab=96.82  E-value=0.0027  Score=55.12  Aligned_cols=160  Identities=14%  Similarity=0.058  Sum_probs=78.6

Q ss_pred             CcccCCChhHHHHHHHHHH-C--CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLAL-R--KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~-~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      +|.||+|+||.+++..|.. .  +..+++.++++. .+...-.+...  ........++-.+   +   .+    .....
T Consensus         4 ~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~~~~~i~~~~~~d---~---~~----~l~~~   70 (312)
T PRK05086          4 AVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGED---P---TP----ALEGA   70 (312)
T ss_pred             EEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--CCCceEEEeCCCC---H---HH----HcCCC
Confidence            4899999999999998855 2  347888888743 21111111110  1011111111111   1   11    12359


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |+||.++|......    ..-.+.+..|....-.+.+.+.++    ..    .+.|+++|=+.-.+..   +.+..+...
T Consensus        71 DiVIitaG~~~~~~----~~R~dll~~N~~i~~~ii~~i~~~----~~----~~ivivvsNP~D~~t~---~~~~~~~~~  135 (312)
T PRK05086         71 DVVLISAGVARKPG----MDRSDLFNVNAGIVKNLVEKVAKT----CP----KACIGIITNPVNTTVA---IAAEVLKKA  135 (312)
T ss_pred             CEEEEcCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHh----CC----CeEEEEccCchHHHHH---HHHHHHHHh
Confidence            99999999864321    223455666665555554444433    20    2344444444411100   000000011


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccC
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEG  188 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~  188 (288)
                      .+++.....+.+-.--..+...++..++-..
T Consensus       136 sg~p~~rvig~~~Lds~R~~~~ia~~l~~~~  166 (312)
T PRK05086        136 GVYDKNKLFGVTTLDVIRSETFVAELKGKQP  166 (312)
T ss_pred             cCCCHHHEEeeecHHHHHHHHHHHHHhCCCh
Confidence            2455555666654333456777777776543

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.68  E-value=0.021  Score=48.39  Aligned_cols=155  Identities=14%  Similarity=0.128  Sum_probs=86.0

Q ss_pred             cccCCChhHHHHHHHHHHCC----CEEEEEeCChHHHHHHHHHHHhhCCCC-ceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRK----AHVIIAARNMAAANEARQLILKEDDTA-RVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |+||+|.+|..++..|+..|    .+|++++++++.++.....++...... ...+.   .++  +..+.       ...
T Consensus         3 IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~---~~~--d~~~~-------~~~   70 (263)
T cd00650           3 VIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS---ITD--DPYEA-------FKD   70 (263)
T ss_pred             EECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE---ECC--chHHH-------hCC
Confidence            78998899999999999999    689999999888777666665432111 11111   111  11111       236


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      .|+||..+|.....    .++-...    +....-+.+.+.+.+.+..    +.+.++++|-+...+...       +..
T Consensus        71 aDiVv~t~~~~~~~----g~~r~~~----~~~n~~i~~~i~~~i~~~~----p~a~~i~~tNP~d~~t~~-------~~~  131 (263)
T cd00650          71 ADVVIITAGVGRKP----GMGRLDL----LKRNVPIVKEIGDNIEKYS----PDAWIIVVSNPVDIITYL-------VWR  131 (263)
T ss_pred             CCEEEECCCCCCCc----CCCHHHH----HHHHHHHHHHHHHHHHHHC----CCeEEEEecCcHHHHHHH-------HHH
Confidence            89999999875432    1111122    2233445555555554432    157888887655443200       001


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhccc
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEE  187 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  187 (288)
                      ..++++....|.+..--..+-+.+++.++..
T Consensus       132 ~sg~~~~kviG~~~ld~~r~~~~la~~l~v~  162 (263)
T cd00650         132 YSGLPKEKVIGLGTLDPIRFRRILAEKLGVD  162 (263)
T ss_pred             HhCCCchhEEEeecchHHHHHHHHHHHhCCC
Confidence            1133444444444333444556666666654

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.66  E-value=0.055  Score=44.83  Aligned_cols=73  Identities=15%  Similarity=0.200  Sum_probs=47.9

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |.||+|.++++.|++.|. ++++++.+.                   .+.+...+.+.+.+|..++..+...++. +...
T Consensus        18 G~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i~~-~~~~   96 (231)
T cd00755          18 GLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFLTP-DNSE   96 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeecCH-hHHH
Confidence            578999999999999997 788887542                   2344455666666666666666655553 2333


Q ss_pred             HHHHHHHhcCCCcceEEEcc
Q 023054           65 DFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~a   84 (288)
                      .++      ...+|+||.+.
T Consensus        97 ~l~------~~~~D~Vvdai  110 (231)
T cd00755          97 DLL------GGDPDFVVDAI  110 (231)
T ss_pred             HHh------cCCCCEEEEcC
Confidence            222      12477777664

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.66  E-value=0.069  Score=45.17  Aligned_cols=26  Identities=23%  Similarity=0.330  Sum_probs=22.4

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARN   30 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~   30 (288)
                      |.||+|.++|+.|++.|. ++.+++.+
T Consensus        37 G~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         37 GIGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            578999999999999994 78888754

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.56  E-value=0.017  Score=50.82  Aligned_cols=74  Identities=19%  Similarity=0.394  Sum_probs=50.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh---------------------HHHHHHHHHHHhhCCCCceEEEEecCCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM---------------------AAANEARQLILKEDDTARVDTLKLDLSS   59 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   59 (288)
                      |.| .||+|..+++.|++.|. +|.+++.+.                     .+.+.+.+.+.+.+|..++..+..+++.
T Consensus        29 VvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~~~~  107 (339)
T PRK07688         29 IIG-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQDVTA  107 (339)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEeccCCH
Confidence            444 48999999999999998 899998863                     3344455566666666777777777753


Q ss_pred             hHHHHHHHHHHHhcCCCcceEEEcc
Q 023054           60 IASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        60 ~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                       +.+..++       ...|+||.+.
T Consensus       108 -~~~~~~~-------~~~DlVid~~  124 (339)
T PRK07688        108 -EELEELV-------TGVDLIIDAT  124 (339)
T ss_pred             -HHHHHHH-------cCCCEEEEcC
Confidence             3333332       2467777664

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.54  E-value=0.02  Score=46.46  Aligned_cols=73  Identities=18%  Similarity=0.274  Sum_probs=52.1

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARN-------------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |.||+|.++++.|+..|. ++++++.+                   ..+.+.+.+.+.+.+|..++..+..++.+ +.+.
T Consensus        28 G~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i~~-~~~~  106 (202)
T TIGR02356        28 GAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERVTA-ENLE  106 (202)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcCCH-HHHH
Confidence            578999999999999997 79999876                   34566667777777777777776666643 2333


Q ss_pred             HHHHHHHhcCCCcceEEEccc
Q 023054           65 DFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~ag   85 (288)
                      +++       ...|++|.+..
T Consensus       107 ~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356       107 LLI-------NNVDLVLDCTD  120 (202)
T ss_pred             HHH-------hCCCEEEECCC
Confidence            322       25788887653

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.50  E-value=0.0041  Score=52.25  Aligned_cols=73  Identities=12%  Similarity=0.230  Sum_probs=52.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|||+- |+.+++.|.++|++|++..++....+....        .....+..+..+.+++.+++.+-     ++|+|
T Consensus         4 LvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~~-----~i~~V   69 (256)
T TIGR00715         4 LLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQELREFLKRH-----SIDIL   69 (256)
T ss_pred             EEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHHHHHHHHHhc-----CCCEE
Confidence            58999998 999999999999999999888764333221        11223446667777776666542     79999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      |+.+..+
T Consensus        70 IDAtHPf   76 (256)
T TIGR00715        70 VDATHPF   76 (256)
T ss_pred             EEcCCHH
Confidence            9988753

This enzyme was found to be a monomer by gel filtration.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.48  E-value=0.022  Score=49.98  Aligned_cols=75  Identities=17%  Similarity=0.338  Sum_probs=54.7

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh---------------------HHHHHHHHHHHhhCCCCceEEEEecCCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM---------------------AAANEARQLILKEDDTARVDTLKLDLSS   59 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   59 (288)
                      |.| .||+|.++++.|++.|. ++++++++.                     .+.+.+.+.+.+.+|..+++.+..|++.
T Consensus        29 IiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~~~~  107 (338)
T PRK12475         29 IVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTDVTV  107 (338)
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEeccCCH
Confidence            444 58999999999999998 799998864                     3455666777777778888888888863


Q ss_pred             hHHHHHHHHHHHhcCCCcceEEEccc
Q 023054           60 IASIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        60 ~~~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                       +.+++++       ...|++|.+..
T Consensus       108 -~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475        108 -EELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             -HHHHHHh-------cCCCEEEEcCC
Confidence             3344332       25788886653

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.39  E-value=0.013  Score=48.45  Aligned_cols=73  Identities=15%  Similarity=0.144  Sum_probs=55.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      |.-|.|-+|+.+|+.|.++|++|++++++++..++....      ...++.+.+|-++++.++++-      ....|++|
T Consensus         4 iIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~ag------i~~aD~vv   71 (225)
T COG0569           4 IIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEAG------IDDADAVV   71 (225)
T ss_pred             EEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhcC------CCcCCEEE
Confidence            345678899999999999999999999999987764432      134788899999987766551      13578888


Q ss_pred             Ecccc
Q 023054           82 NNAGI   86 (288)
Q Consensus        82 ~~ag~   86 (288)
                      -..|-
T Consensus        72 a~t~~   76 (225)
T COG0569          72 AATGN   76 (225)
T ss_pred             EeeCC
Confidence            76663

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.39  E-value=0.03  Score=42.66  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=48.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIA   61 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   61 (288)
                      |.| .||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+..++.+..
T Consensus         4 iiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~~~   82 (143)
T cd01483           4 LVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISEDN   82 (143)
T ss_pred             EEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecChhh
Confidence            455 48999999999999998 688886542                   234455566666666666666666655432


Q ss_pred             HHHHHHHHHHhcCCCcceEEEccc
Q 023054           62 SIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        62 ~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      .        .+...+.|++|.+..
T Consensus        83 ~--------~~~~~~~diVi~~~d   98 (143)
T cd01483          83 L--------DDFLDGVDLVIDAID   98 (143)
T ss_pred             H--------HHHhcCCCEEEECCC
Confidence            2        111235677776654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.39  E-value=0.029  Score=48.82  Aligned_cols=114  Identities=12%  Similarity=0.085  Sum_probs=71.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCC-CceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDT-ARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|+ |++|.+++..|+..|.  .+++++++++.++.....+....+- .++....   .+       .+.+    ...|
T Consensus        11 iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~-------~~~~----~~ad   75 (315)
T PRK00066         11 LVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD-------YSDC----KDAD   75 (315)
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC-------HHHh----CCCC
Confidence            7887 9999999999999987  7999999998887777777654321 1222221   12       1111    3689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ  142 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  142 (288)
                      ++|..||....+    ...-.+.+..|.    .+.+.+.+.+.+...    .+.++++|-+.-.
T Consensus        76 ivIitag~~~k~----g~~R~dll~~N~----~i~~~i~~~i~~~~~----~~~vivvsNP~d~  127 (315)
T PRK00066         76 LVVITAGAPQKP----GETRLDLVEKNL----KIFKSIVGEVMASGF----DGIFLVASNPVDI  127 (315)
T ss_pred             EEEEecCCCCCC----CCCHHHHHHHHH----HHHHHHHHHHHHhCC----CeEEEEccCcHHH
Confidence            999999985432    122234455444    344444555544321    5788888876544

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.36  E-value=0.034  Score=43.99  Aligned_cols=56  Identities=14%  Similarity=0.341  Sum_probs=38.0

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh------------------HHHHHHHHHHHhhCCCCceEEEEecCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM------------------AAANEARQLILKEDDTARVDTLKLDLS   58 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~   58 (288)
                      |.| .||+|.++++.|++.|. ++++++.+.                  .+.+...+.+.+.+|..++..+...++
T Consensus         4 ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~   78 (174)
T cd01487           4 IAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID   78 (174)
T ss_pred             EEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC
Confidence            444 68999999999999998 599998765                  233344445555555555555555444

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06849 hypothetical protein; Provisional

Probab=96.34  E-value=0.025  Score=50.84  Aligned_cols=78  Identities=14%  Similarity=0.135  Sum_probs=49.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||||++.++|.++++.|.++|++|++++.++.........+      .....+...-.+.+...+.+.++.+.. ++|+|
T Consensus         8 LI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~v   80 (389)
T PRK06849          8 LITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE-NIDLL   80 (389)
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-CCCEE
Confidence            69999999999999999999999999998865543222211      112222112234443433333444433 58999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |-...
T Consensus        81 IP~~e   85 (389)
T PRK06849         81 IPTCE   85 (389)
T ss_pred             EECCh
Confidence            87765

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.29  E-value=0.035  Score=48.07  Aligned_cols=163  Identities=12%  Similarity=0.082  Sum_probs=85.9

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |+|++|.+|.++|..|+.+|.  .+++++.+  .++.....+....+  ......+. .+ +++       .+.....|+
T Consensus         5 IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~--~~~i~~~~-~~-~~~-------y~~~~daDi   71 (310)
T cd01337           5 VLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT--PAKVTGYL-GP-EEL-------KKALKGADV   71 (310)
T ss_pred             EECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC--cceEEEec-CC-Cch-------HHhcCCCCE
Confidence            789999999999999998884  79999988  32322222322211  11111110 00 011       112347899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      +|.+||....+    .+.-.+.++.|..-.-.+.+.+.++-   +     .+.|+++|-+.-.+...-   ..-+....+
T Consensus        72 vvitaG~~~k~----g~tR~dll~~N~~i~~~i~~~i~~~~---p-----~a~vivvtNPvDv~~~i~---t~~~~~~s~  136 (310)
T cd01337          72 VVIPAGVPRKP----GMTRDDLFNINAGIVRDLATAVAKAC---P-----KALILIISNPVNSTVPIA---AEVLKKAGV  136 (310)
T ss_pred             EEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHhC---C-----CeEEEEccCchhhHHHHH---HHHHHHhcC
Confidence            99999986432    12345566666554444444444331   1     578888888762210000   000011224


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceE
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNIT  192 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~  192 (288)
                      +++....|.+-.=-..+-..++++++....+|+
T Consensus       137 ~p~~rviG~~~LDs~R~~~~la~~l~v~~~~V~  169 (310)
T cd01337         137 YDPKRLFGVTTLDVVRANTFVAELLGLDPAKVN  169 (310)
T ss_pred             CCHHHEEeeechHHHHHHHHHHHHhCcCHHHEE
Confidence            555556666532223566777777775532343

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.26  E-value=0.052  Score=40.89  Aligned_cols=74  Identities=19%  Similarity=0.352  Sum_probs=55.1

Q ss_pred             cCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChHHH
Q 023054            4 GGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIASI   63 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   63 (288)
                      =|.||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+..+++ .+..
T Consensus         8 iG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~   86 (135)
T PF00899_consen    8 IGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKID-EENI   86 (135)
T ss_dssp             ESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHCS-HHHH
T ss_pred             ECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecccc-cccc
Confidence            4679999999999999998 688876431                   356667778888888888888888883 3444


Q ss_pred             HHHHHHHHhcCCCcceEEEccc
Q 023054           64 KDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        64 ~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      .++++       ..|++|.+..
T Consensus        87 ~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   87 EELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             HHHHH-------TSSEEEEESS
T ss_pred             ccccc-------CCCEEEEecC
Confidence            44442       5688887754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.22  E-value=0.0042  Score=56.86  Aligned_cols=73  Identities=19%  Similarity=0.284  Sum_probs=46.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|||+++ +|.++|+.|+++|++|++.+++........+.+...  +  +.+...+  +...+   .+      ..+|.|
T Consensus         9 ~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g--~~~~~~~--~~~~~---~~------~~~d~v   72 (447)
T PRK02472          9 LVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--G--IKVICGS--HPLEL---LD------EDFDLM   72 (447)
T ss_pred             EEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--C--CEEEeCC--CCHHH---hc------CcCCEE
Confidence            5899876 999999999999999999998764433334444332  2  2222211  11111   11      148999


Q ss_pred             EEccccCCC
Q 023054           81 INNAGIMFC   89 (288)
Q Consensus        81 v~~ag~~~~   89 (288)
                      |+++|+...
T Consensus        73 V~s~gi~~~   81 (447)
T PRK02472         73 VKNPGIPYT   81 (447)
T ss_pred             EECCCCCCC
Confidence            999998643

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.20  E-value=0.023  Score=48.68  Aligned_cols=41  Identities=22%  Similarity=0.152  Sum_probs=35.8

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKED   45 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~   45 (288)
                      |+||.|++++..|++.|+ +|++++|+.++.+.+.+.+....
T Consensus       134 GaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        134 GAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             CCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            458899999999999998 79999999999998888876554

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.19  E-value=0.023  Score=49.88  Aligned_cols=75  Identities=11%  Similarity=0.233  Sum_probs=48.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||++++|..+++.+...|++|+.++++.++.+.+.+.+     +.. .+  .|..+..+..+.+..+.  ..++|++
T Consensus       156 lI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~-~v--i~~~~~~~~~~~i~~~~--~~gvd~v  225 (338)
T cd08295         156 FVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFD-DA--FNYKEEPDLDAALKRYF--PNGIDIY  225 (338)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCc-ee--EEcCCcccHHHHHHHhC--CCCcEEE
Confidence            58999999999988877788999999999887766554423     221 12  23332223333233322  1468999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       226 ~d~~g  230 (338)
T cd08295         226 FDNVG  230 (338)
T ss_pred             EECCC
Confidence            98876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.19  E-value=0.075  Score=46.18  Aligned_cols=160  Identities=9%  Similarity=0.055  Sum_probs=88.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCc-eEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTAR-VDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|+ |.+|..++..|+..|.  .+++++.+++.++.....+....+-.. ..+...  .|.+       .    ....|
T Consensus         8 IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-------~----~~~ad   73 (312)
T cd05293           8 VVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-------V----TANSK   73 (312)
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-------H----hCCCC
Confidence            7885 9999999999998875  699999988877766666655421111 122211  1211       1    13689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|.+||....+    .+.-.+.+..|.    -+.+.+.+.+.+..    +++.++++|-+.-.+..       -+....
T Consensus        74 ivvitaG~~~k~----g~~R~dll~~N~----~i~~~~~~~i~~~~----p~~~vivvsNP~d~~t~-------~~~k~s  134 (312)
T cd05293          74 VVIVTAGARQNE----GESRLDLVQRNV----DIFKGIIPKLVKYS----PNAILLVVSNPVDIMTY-------VAWKLS  134 (312)
T ss_pred             EEEECCCCCCCC----CCCHHHHHHHHH----HHHHHHHHHHHHhC----CCcEEEEccChHHHHHH-------HHHHHh
Confidence            999999976431    122233444443    34555555554432    15788888876544320       001112


Q ss_pred             CCCccccchhh-HHHHHHHHHHHHHHhcccCCceEEE
Q 023054          159 GYSDKKAYGQS-KLANILHANELSRRFQEEGVNITAN  194 (288)
Q Consensus       159 ~~~~~~~Y~~s-K~a~~~~~~~la~~~~~~~~~i~v~  194 (288)
                      ++++....+.. -.-...+-..+++.++-....|+..
T Consensus       135 g~p~~~viG~gt~Ld~~R~~~~la~~l~v~~~~v~~~  171 (312)
T cd05293         135 GLPKHRVIGSGCNLDSARFRYLIAERLGVAPSSVHGW  171 (312)
T ss_pred             CCCHHHEEecCchHHHHHHHHHHHHHhCCChhhEEEE
Confidence            34444555552 2223335666677666543234443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.18  E-value=0.0091  Score=51.03  Aligned_cols=41  Identities=22%  Similarity=0.239  Sum_probs=36.0

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLIL   42 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~   42 (288)
                      +|+|+ ||+|++++..|+..| .+|++++|+.++++++.+.+.
T Consensus       127 lVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        127 LILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             EEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            47886 899999999999999 689999999998888777664

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.17  E-value=0.032  Score=48.32  Aligned_cols=57  Identities=21%  Similarity=0.341  Sum_probs=37.8

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSS   59 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   59 (288)
                      |.| .||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+..++++
T Consensus         4 IVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~   80 (312)
T cd01489           4 VVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD   80 (312)
T ss_pred             EEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence            455 59999999999999997 688877543                   2334444445555555555555555554

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.16  E-value=0.025  Score=49.48  Aligned_cols=73  Identities=14%  Similarity=0.236  Sum_probs=46.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-C-Ccc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-L-PLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~-~id   78 (288)
                      ||+||+||+|...++-....|++++++..+.++.+ ...++     +..   ...|..+.+    +.+.+++.. + ++|
T Consensus       147 LV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd---~vi~y~~~~----~~~~v~~~t~g~gvD  213 (326)
T COG0604         147 LVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GAD---HVINYREED----FVEQVRELTGGKGVD  213 (326)
T ss_pred             EEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCC---EEEcCCccc----HHHHHHHHcCCCCce
Confidence            68999999999987777778977777777766655 33333     222   122344444    333333322 2 599


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      +++...|.
T Consensus       214 vv~D~vG~  221 (326)
T COG0604         214 VVLDTVGG  221 (326)
T ss_pred             EEEECCCH
Confidence            99988874

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.10  E-value=0.039  Score=47.88  Aligned_cols=117  Identities=18%  Similarity=0.157  Sum_probs=64.9

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCCh--HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNM--AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|++|.+|..++..|+..|.  .|+++++++  +.++.....+........... .+..++  +...        ....
T Consensus         5 IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~--d~~~--------l~~a   73 (309)
T cd05294           5 IIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISS--DLSD--------VAGS   73 (309)
T ss_pred             EECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEECC--CHHH--------hCCC
Confidence            789999999999999999986  499999955  444333333322100000000 111111  1111        2368


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH  141 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  141 (288)
                      |++|.++|.....    ...-.+.+..|..-    ++.+.+.+.+..    +.+.|++++++.-
T Consensus        74 DiViitag~p~~~----~~~r~dl~~~n~~i----~~~~~~~i~~~~----~~~~viv~~npvd  125 (309)
T cd05294          74 DIVIITAGVPRKE----GMSRLDLAKKNAKI----VKKYAKQIAEFA----PDTKILVVTNPVD  125 (309)
T ss_pred             CEEEEecCCCCCC----CCCHHHHHHHHHHH----HHHHHHHHHHHC----CCeEEEEeCCchH
Confidence            9999999975321    11123444545444    444444443321    1578899988654

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.09  E-value=0.055  Score=44.76  Aligned_cols=73  Identities=14%  Similarity=0.261  Sum_probs=50.9

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARN-------------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |.||+|.++++.|+..|. ++++++.+                   ..+.+.+.+.+.+.+|..++..+..+++. +.+.
T Consensus        28 G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i~~-~~~~  106 (228)
T cd00757          28 GAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERLDA-ENAE  106 (228)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecceeCH-HHHH
Confidence            588999999999999998 67777432                   23556667777777777777777766642 3333


Q ss_pred             HHHHHHHhcCCCcceEEEccc
Q 023054           65 DFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~ag   85 (288)
                      +++       ...|+||.+..
T Consensus       107 ~~~-------~~~DvVi~~~d  120 (228)
T cd00757         107 ELI-------AGYDLVLDCTD  120 (228)
T ss_pred             HHH-------hCCCEEEEcCC
Confidence            333       25788887765

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.08  E-value=0.048  Score=48.30  Aligned_cols=72  Identities=21%  Similarity=0.279  Sum_probs=50.4

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |.||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+...++.. ...
T Consensus        35 G~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~~~-~~~  113 (355)
T PRK05597         35 GAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLTWS-NAL  113 (355)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecCHH-HHH
Confidence            458999999999999997 688887653                   45666777787888877787777666642 222


Q ss_pred             HHHHHHHhcCCCcceEEEcc
Q 023054           65 DFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~a   84 (288)
                      .++.       ..|+||.+.
T Consensus       114 ~~~~-------~~DvVvd~~  126 (355)
T PRK05597        114 DELR-------DADVILDGS  126 (355)
T ss_pred             HHHh-------CCCEEEECC
Confidence            2222       456666554

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.07  E-value=0.072  Score=44.57  Aligned_cols=73  Identities=18%  Similarity=0.245  Sum_probs=48.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+++ +|.++++.+...|.+|+++++++++.+.+ ..+     +.. .  ..|..+.+....+.   ......+|++
T Consensus       139 li~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~--~~~~~~~~~~~~~~---~~~~~~~d~v  205 (271)
T cd05188         139 LVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL-----GAD-H--VIDYKEEDLEEELR---LTGGGGADVV  205 (271)
T ss_pred             EEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh-----CCc-e--eccCCcCCHHHHHH---HhcCCCCCEE
Confidence            5789888 99999998888999999999987665543 222     111 1  12444444444333   2233579999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      +++++.
T Consensus       206 i~~~~~  211 (271)
T cd05188         206 IDAVGG  211 (271)
T ss_pred             EECCCC
Confidence            998873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.07  E-value=0.054  Score=45.37  Aligned_cols=75  Identities=12%  Similarity=0.266  Sum_probs=49.7

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIA   61 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   61 (288)
                      |.|+ ||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+...++. +
T Consensus        37 iiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i~~-~  114 (245)
T PRK05690         37 VVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARLDD-D  114 (245)
T ss_pred             EECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccCCH-H
Confidence            5565 9999999999999997 688876532                   3445556666666777777776666553 2


Q ss_pred             HHHHHHHHHHhcCCCcceEEEccc
Q 023054           62 SIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        62 ~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      .+..++       ...|+||.+..
T Consensus       115 ~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        115 ELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             HHHHHH-------hcCCEEEecCC
Confidence            233222       25788887653

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.07  E-value=0.18  Score=41.92  Aligned_cols=152  Identities=14%  Similarity=0.165  Sum_probs=90.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      |--|.||+|..+|+.|-..|++++.+..+.++.+.+.+.      +. -+.  .|.+.++-++++.+-.  ...++|++.
T Consensus       152 vhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken------G~-~h~--I~y~~eD~v~~V~kiT--ngKGVd~vy  220 (336)
T KOG1197|consen  152 VHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN------GA-EHP--IDYSTEDYVDEVKKIT--NGKGVDAVY  220 (336)
T ss_pred             EEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc------CC-cce--eeccchhHHHHHHhcc--CCCCceeee
Confidence            455889999999999999999999999888776654431      22 222  4666655444433321  123689888


Q ss_pred             EccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC---CCC
Q 023054           82 NNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN---DRA  158 (288)
Q Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~---~~~  158 (288)
                      -..|..         .+..        .+       ..++.       .|.+|..+-..+...++.   +..+.   -.-
T Consensus       221 DsvG~d---------t~~~--------sl-------~~Lk~-------~G~mVSfG~asgl~~p~~---l~~ls~k~l~l  266 (336)
T KOG1197|consen  221 DSVGKD---------TFAK--------SL-------AALKP-------MGKMVSFGNASGLIDPIP---LNQLSPKALQL  266 (336)
T ss_pred             ccccch---------hhHH--------HH-------HHhcc-------CceEEEeccccCCCCCee---hhhcChhhhhh
Confidence            776642         1111        11       11222       478888777666543222   22221   111


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHP  198 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~P  198 (288)
                      -.+....|-....-+..++..+-......+.+|+|+.+.|
T Consensus       267 vrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~yp  306 (336)
T KOG1197|consen  267 VRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYP  306 (336)
T ss_pred             ccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecc
Confidence            2335566777777777766666666666666788888876

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.06  E-value=0.048  Score=48.73  Aligned_cols=73  Identities=19%  Similarity=0.329  Sum_probs=51.6

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARN-------------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |.||+|.+++..|+..|. ++++++++                   ..+.+.+.+.+.+.+|..++..+...+.+ +.+.
T Consensus       142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~~~-~~~~  220 (376)
T PRK08762        142 GAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERVTS-DNVE  220 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccCCh-HHHH
Confidence            568999999999999998 79999887                   45666667777777666666666555543 2333


Q ss_pred             HHHHHHHhcCCCcceEEEccc
Q 023054           65 DFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~ag   85 (288)
                      .+++       ..|+||.+..
T Consensus       221 ~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        221 ALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             HHHh-------CCCEEEECCC
Confidence            3332       5788887764

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.06  E-value=0.0095  Score=55.61  Aligned_cols=40  Identities=28%  Similarity=0.346  Sum_probs=35.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI   41 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~   41 (288)
                      +|+|+ ||+|++++..|+++|++|++++|+.++++++.+.+
T Consensus       383 lIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        383 VVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             EEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            57898 69999999999999999999999988887776654

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.01  E-value=0.038  Score=47.48  Aligned_cols=75  Identities=16%  Similarity=0.290  Sum_probs=50.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+++++|.++++.+...|++|++++++.+..+.+ ..+     +..   ...|..+.+....+.+.. . ..++|.+
T Consensus       144 lv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~-~-~~~~d~v  212 (323)
T cd05276         144 LIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEEVKEAT-G-GRGVDVI  212 (323)
T ss_pred             EEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHHHHHHh-C-CCCeEEE
Confidence            5899999999999999999999999999987766544 222     221   123444433333333322 1 2369999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      ++++|.
T Consensus       213 i~~~g~  218 (323)
T cd05276         213 LDMVGG  218 (323)
T ss_pred             EECCch
Confidence            999883

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=95.97  E-value=0.016  Score=46.21  Aligned_cols=69  Identities=16%  Similarity=0.153  Sum_probs=40.8

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      +||..|.++|++++.+|++|+++..... ...          +..+..+  ++.+.+++.+.+.+.   ....|++|++|
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~~~i--~v~sa~em~~~~~~~---~~~~Di~I~aA   90 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGVKVI--RVESAEEMLEAVKEL---LPSADIIIMAA   90 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEE--E-SSHHHHHHHHHHH---GGGGSEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccceEE--Eecchhhhhhhhccc---cCcceeEEEec
Confidence            4789999999999999999999887632 110          2345444  455555555544444   34559999999


Q ss_pred             ccCCC
Q 023054           85 GIMFC   89 (288)
Q Consensus        85 g~~~~   89 (288)
                      ++...
T Consensus        91 AVsDf   95 (185)
T PF04127_consen   91 AVSDF   95 (185)
T ss_dssp             B--SE
T ss_pred             chhhe
Confidence            98643

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.96  E-value=0.083  Score=41.23  Aligned_cols=80  Identities=20%  Similarity=0.189  Sum_probs=50.3

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCC-----CCceEEEEecCCChHHHHHHHHH--HHhcCCCc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDD-----TARVDTLKLDLSSIASIKDFAQN--FIALNLPL   77 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~--~~~~~~~i   77 (288)
                      |.|-+|..++++|+++|++|++.+|++++.+++.+.-.....     -.+..++-.=+.+.+++++++..  +.....+=
T Consensus         8 GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~g   87 (163)
T PF03446_consen    8 GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGLRPG   87 (163)
T ss_dssp             --SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS-TT
T ss_pred             chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhccccc
Confidence            347899999999999999999999999888776643111000     01234555567777788887776  55443333


Q ss_pred             ceEEEcc
Q 023054           78 NILINNA   84 (288)
Q Consensus        78 d~lv~~a   84 (288)
                      .++|.+.
T Consensus        88 ~iiid~s   94 (163)
T PF03446_consen   88 KIIIDMS   94 (163)
T ss_dssp             EEEEE-S
T ss_pred             eEEEecC
Confidence            4444443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.95  E-value=0.033  Score=49.21  Aligned_cols=75  Identities=9%  Similarity=0.222  Sum_probs=48.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|++|...++.+...|++|+.+++++++.+.+..++     +.. .+  .|..+...+.+.+.++.  .+++|++
T Consensus       163 lV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~-~v--i~~~~~~~~~~~i~~~~--~~gvD~v  232 (348)
T PLN03154        163 FVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD-EA--FNYKEEPDLDAALKRYF--PEGIDIY  232 (348)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCC-EE--EECCCcccHHHHHHHHC--CCCcEEE
Confidence            58999999999988877788999999998887765544333     222 12  23332222333333322  2368999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       233 ~d~vG  237 (348)
T PLN03154        233 FDNVG  237 (348)
T ss_pred             EECCC
Confidence            98877

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.92  E-value=0.19  Score=43.47  Aligned_cols=160  Identities=13%  Similarity=0.166  Sum_probs=88.2

Q ss_pred             cccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCC-CceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDT-ARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |.|+ |++|..++..|+..|  .++++++++++.++.....+....+. ........  .+   .    +.    ....|
T Consensus         3 iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~---~----~~----l~~aD   68 (300)
T cd00300           3 IIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD---Y----AD----AADAD   68 (300)
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC---H----HH----hCCCC
Confidence            5665 689999999999998  57999999998877777766654221 11122211  12   1    11    13689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|.++|.....    .+.-.+.+..|    .-+++.+.+.+.+..    +.+.|+++|-+...+..       -+....
T Consensus        69 iVIitag~p~~~----~~~R~~l~~~n----~~i~~~~~~~i~~~~----p~~~viv~sNP~d~~~~-------~~~~~s  129 (300)
T cd00300          69 IVVITAGAPRKP----GETRLDLINRN----APILRSVITNLKKYG----PDAIILVVSNPVDILTY-------VAQKLS  129 (300)
T ss_pred             EEEEcCCCCCCC----CCCHHHHHHHH----HHHHHHHHHHHHHhC----CCeEEEEccChHHHHHH-------HHHHHh
Confidence            999999975321    11223343333    445555555555432    16788888876654421       000112


Q ss_pred             CCCccccchhhHHH-HHHHHHHHHHHhcccCCceEEE
Q 023054          159 GYSDKKAYGQSKLA-NILHANELSRRFQEEGVNITAN  194 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a-~~~~~~~la~~~~~~~~~i~v~  194 (288)
                      ++++...++..-.- -..+-..+++.++.....|+..
T Consensus       130 g~~~~kviG~gt~lDs~r~~~~la~~l~v~~~~v~~~  166 (300)
T cd00300         130 GLPKNRVIGSGTLLDSARFRSLLAEKLDVDPQSVHAY  166 (300)
T ss_pred             CcCHHHEEecCCcHHHHHHHHHHHHHhCCCcccEEEE
Confidence            34444444442211 2445566666666543234443

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=95.90  E-value=0.039  Score=47.94  Aligned_cols=70  Identities=20%  Similarity=0.279  Sum_probs=46.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+||++++|.++++.+...|++|+++.++.++.+.+ ..   .  +.. .++  |..   +   +.+.+.+. .++|++
T Consensus       167 lI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~--~~~-~~~--~~~---~---~~~~~~~~-~~~d~v  230 (332)
T cd08259         167 LVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KE---L--GAD-YVI--DGS---K---FSEDVKKL-GGADVV  230 (332)
T ss_pred             EEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HH---c--CCc-EEE--ecH---H---HHHHHHhc-cCCCEE
Confidence            5899999999999999999999999999887665443 21   1  221 112  221   1   22222222 379999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      ++++|.
T Consensus       231 ~~~~g~  236 (332)
T cd08259         231 IELVGS  236 (332)
T ss_pred             EECCCh
Confidence            999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.88  E-value=0.084  Score=43.17  Aligned_cols=72  Identities=14%  Similarity=0.250  Sum_probs=47.1

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh------------------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM------------------AAANEARQLILKEDDTARVDTLKLDLSSIASIKD   65 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   65 (288)
                      |.||+|..+++.|++.|. ++++++.+.                  .+.+.+.+.+.+.+|..++..+...+++. ...+
T Consensus        35 G~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~-~~~~  113 (212)
T PRK08644         35 GAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKIDED-NIEE  113 (212)
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecCHH-HHHH
Confidence            468999999999999998 599988762                  34445555566666666666666555542 2222


Q ss_pred             HHHHHHhcCCCcceEEEcc
Q 023054           66 FAQNFIALNLPLNILINNA   84 (288)
Q Consensus        66 ~~~~~~~~~~~id~lv~~a   84 (288)
                      ++       ...|+||.+.
T Consensus       114 ~~-------~~~DvVI~a~  125 (212)
T PRK08644        114 LF-------KDCDIVVEAF  125 (212)
T ss_pred             HH-------cCCCEEEECC
Confidence            22       2567777663

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=95.87  E-value=0.035  Score=48.35  Aligned_cols=74  Identities=14%  Similarity=0.191  Sum_probs=48.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||++++|..+++.+...|++|+.+++++++.+.+ .++     +.. .+  .|..+.+...+.+....  .+++|++
T Consensus       143 LI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-----Ga~-~v--i~~~~~~~~~~~~~~~~--~~gvdvv  211 (325)
T TIGR02825       143 MVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-----GFD-VA--FNYKTVKSLEETLKKAS--PDGYDCY  211 (325)
T ss_pred             EEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCC-EE--EeccccccHHHHHHHhC--CCCeEEE
Confidence            5899999999998887777899999999888765544 222     222 12  23333333333333332  2369999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       212 ~d~~G  216 (325)
T TIGR02825       212 FDNVG  216 (325)
T ss_pred             EECCC
Confidence            98876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.86  E-value=0.044  Score=47.53  Aligned_cols=154  Identities=12%  Similarity=0.130  Sum_probs=83.3

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |+|++|.||.++|..|+..+.  .++++++++  .+.....+....  .......+.  +.++       ..+.....|+
T Consensus         4 IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~--~~~~i~~~~--~~~~-------~~~~~~daDi   70 (312)
T TIGR01772         4 VLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP--TAASVKGFS--GEEG-------LENALKGADV   70 (312)
T ss_pred             EECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC--cCceEEEec--CCCc-------hHHHcCCCCE
Confidence            789999999999999998875  799999886  221111122110  011111100  0000       1122347899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc----ccccCCccccCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ----YTYKGGIRFQKIN  155 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~----~~~~~~~~~~~~~  155 (288)
                      +|..||.....    ...-.+.+..|+.    +.+.+.+.+.+..    +++.|+++|-+.-.    +.       .-+.
T Consensus        71 vvitaG~~~~~----g~~R~dll~~N~~----I~~~i~~~i~~~~----p~~iiivvsNPvDv~~~i~t-------~~~~  131 (312)
T TIGR01772        71 VVIPAGVPRKP----GMTRDDLFNVNAG----IVKDLVAAVAESC----PKAMILVITNPVNSTVPIAA-------EVLK  131 (312)
T ss_pred             EEEeCCCCCCC----CccHHHHHHHhHH----HHHHHHHHHHHhC----CCeEEEEecCchhhHHHHHH-------HHHH
Confidence            99999975332    1233455666655    5555555554432    15778888887632    11       0011


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhccc
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEE  187 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  187 (288)
                      ...++++....|.+-.=-..|-..+++.++-.
T Consensus       132 ~~sg~p~~rViG~g~LDsaR~r~~la~~l~v~  163 (312)
T TIGR01772       132 KKGVYDPNKLFGVTTLDIVRANTFVAELKGKD  163 (312)
T ss_pred             HhcCCChHHEEeeecchHHHHHHHHHHHhCCC
Confidence            12245555555554322234566677776654

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.85  E-value=0.037  Score=48.55  Aligned_cols=74  Identities=9%  Similarity=0.162  Sum_probs=48.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+||++++|.++++.....|+ +|+.+++++++.+.+.+++     +... +  .|..+.+ +.+.+.++.  ..++|+
T Consensus       159 lI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~-v--i~~~~~~-~~~~i~~~~--~~gvd~  227 (345)
T cd08293         159 VVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA-A--INYKTDN-VAERLRELC--PEGVDV  227 (345)
T ss_pred             EEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE-E--EECCCCC-HHHHHHHHC--CCCceE
Confidence            5899999999998877777898 7999999887766554433     2221 2  2333322 222233332  146999


Q ss_pred             EEEccc
Q 023054           80 LINNAG   85 (288)
Q Consensus        80 lv~~ag   85 (288)
                      ++.+.|
T Consensus       228 vid~~g  233 (345)
T cd08293         228 YFDNVG  233 (345)
T ss_pred             EEECCC
Confidence            998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.85  E-value=0.16  Score=44.06  Aligned_cols=154  Identities=12%  Similarity=0.115  Sum_probs=87.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC--C-CceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD--T-ARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |.|+ |.||..+|..|+.++.  .+++++.+++.++.....+....+  . .++.....   +       .+.+    ..
T Consensus         4 IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~-------y~~~----~~   68 (307)
T cd05290           4 VIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D-------YDDC----AD   68 (307)
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C-------HHHh----CC
Confidence            5677 9999999999998885  699999998877766655654321  1 23333322   2       1222    36


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      .|++|..||....+. .+. +-.+.+..|    ..+++.+.+.+.+...    ++.++++|-+.-.+..       -...
T Consensus        69 aDivvitaG~~~kpg-~tr-~R~dll~~N----~~I~~~i~~~i~~~~p----~~i~ivvsNPvDv~t~-------~~~k  131 (307)
T cd05290          69 ADIIVITAGPSIDPG-NTD-DRLDLAQTN----AKIIREIMGNITKVTK----EAVIILITNPLDIAVY-------IAAT  131 (307)
T ss_pred             CCEEEECCCCCCCCC-CCc-hHHHHHHHH----HHHHHHHHHHHHHhCC----CeEEEEecCcHHHHHH-------HHHH
Confidence            899999999854321 110 013344444    4566666666665431    4667777665433210       0011


Q ss_pred             CCCCCccccchh-hHHHHHHHHHHHHHHhccc
Q 023054          157 RAGYSDKKAYGQ-SKLANILHANELSRRFQEE  187 (288)
Q Consensus       157 ~~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~  187 (288)
                      ..++++....+. +-.=-..|-..+++.++-.
T Consensus       132 ~sg~p~~rviG~gt~LDs~R~~~~la~~l~v~  163 (307)
T cd05290         132 EFDYPANKVIGTGTMLDTARLRRIVADKYGVD  163 (307)
T ss_pred             HhCcChhheecccchHHHHHHHHHHHHHhCCC
Confidence            123445455555 3333344566677776643

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.84  E-value=0.31  Score=42.50  Aligned_cols=160  Identities=11%  Similarity=0.124  Sum_probs=83.5

Q ss_pred             cccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|| |.+|..++..++..| ..|++++++++.++.....+....+  +..... .. -+|   .+.        ...-|
T Consensus        10 IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i-~~-~~d---~~~--------l~~AD   75 (319)
T PTZ00117         10 MIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINI-LG-TNN---YED--------IKDSD   75 (319)
T ss_pred             EECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEE-Ee-CCC---HHH--------hCCCC
Confidence            6786 889999999999999 6899999988665432222221110  111111 11 112   121        12679


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||.++|.....    ...-.+.+..|.    .+.+.+.+.+.+..    +++.++++|-+...+..       -+....
T Consensus        76 iVVitag~~~~~----g~~r~dll~~n~----~i~~~i~~~i~~~~----p~a~vivvsNP~di~t~-------~~~~~s  136 (319)
T PTZ00117         76 VVVITAGVQRKE----EMTREDLLTING----KIMKSVAESVKKYC----PNAFVICVTNPLDCMVK-------VFQEKS  136 (319)
T ss_pred             EEEECCCCCCCC----CCCHHHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEecChHHHHHH-------HHHHhh
Confidence            999999975432    122344555555    45555666555432    14668888775544320       000112


Q ss_pred             CCCccccchhh-HHHHHHHHHHHHHHhcccCCceEEE
Q 023054          159 GYSDKKAYGQS-KLANILHANELSRRFQEEGVNITAN  194 (288)
Q Consensus       159 ~~~~~~~Y~~s-K~a~~~~~~~la~~~~~~~~~i~v~  194 (288)
                      ++|.....+.+ -.--..+.+.+++.++-.-..|+..
T Consensus       137 ~~p~~rviG~gt~lds~R~~~~la~~l~v~~~~v~~~  173 (319)
T PTZ00117        137 GIPSNKICGMAGVLDSSRFRCNLAEKLGVSPGDVSAV  173 (319)
T ss_pred             CCCcccEEEecchHHHHHHHHHHHHHhCCCcccceEE
Confidence            33434444444 1112255666777766543224433

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.83  E-value=0.034  Score=50.22  Aligned_cols=69  Identities=13%  Similarity=0.215  Sum_probs=47.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |.|+ ||+|+.+++.|+++|+ +|+++.|+.++++.+..++.    ..  .++     ..++....       ....|+|
T Consensus       186 viGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~--~~~-----~~~~l~~~-------l~~aDiV  246 (414)
T PRK13940        186 IIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NA--SAH-----YLSELPQL-------IKKADII  246 (414)
T ss_pred             EEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CC--eEe-----cHHHHHHH-------hccCCEE
Confidence            4555 9999999999999996 79999999988777666541    11  111     12222222       2357999


Q ss_pred             EEccccCCC
Q 023054           81 INNAGIMFC   89 (288)
Q Consensus        81 v~~ag~~~~   89 (288)
                      |++.+...+
T Consensus       247 I~aT~a~~~  255 (414)
T PRK13940        247 IAAVNVLEY  255 (414)
T ss_pred             EECcCCCCe
Confidence            999987544

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.83  E-value=0.032  Score=47.57  Aligned_cols=68  Identities=24%  Similarity=0.299  Sum_probs=48.7

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      |+||-+++++..|++.|+ +|+++.|+.++++++.+.+...++  .+.  ..++.+.+..+           ..|+|||+
T Consensus       133 GAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~--~~~--~~~~~~~~~~~-----------~~dliINa  197 (283)
T COG0169         133 GAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA--AVE--AAALADLEGLE-----------EADLLINA  197 (283)
T ss_pred             CCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc--ccc--ccccccccccc-----------ccCEEEEC
Confidence            468899999999999995 799999999999999888866532  111  12232222111           36899999


Q ss_pred             cccC
Q 023054           84 AGIM   87 (288)
Q Consensus        84 ag~~   87 (288)
                      ....
T Consensus       198 Tp~G  201 (283)
T COG0169         198 TPVG  201 (283)
T ss_pred             CCCC
Confidence            7654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.81  E-value=0.033  Score=51.06  Aligned_cols=57  Identities=16%  Similarity=0.188  Sum_probs=42.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKD   65 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   65 (288)
                      +|.|+ |.+|+++++.|.++|+.|++++++++..+.+.+.       ..+.++..|.++...+++
T Consensus         4 iIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          4 IIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHHHH
Confidence            36676 9999999999999999999999999876654431       125566667766554443

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.79  E-value=0.09  Score=45.69  Aligned_cols=74  Identities=11%  Similarity=0.140  Sum_probs=48.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|+++++|.++++.+-+.|++|+.+.++.++.+.+.+.+     +.. .+  .|..+.+..+.+.+ ..  .+++|++
T Consensus       150 lI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~-----g~~-~~--~~~~~~~~~~~v~~-~~--~~~~d~v  218 (329)
T cd05288         150 VVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL-----GFD-AA--INYKTPDLAEALKE-AA--PDGIDVY  218 (329)
T ss_pred             EEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc-----CCc-eE--EecCChhHHHHHHH-hc--cCCceEE
Confidence            58899999999999988899999999998887655443322     221 12  23333333333222 22  1469999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       219 i~~~g  223 (329)
T cd05288         219 FDNVG  223 (329)
T ss_pred             EEcch
Confidence            98876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.77  E-value=0.052  Score=48.38  Aligned_cols=70  Identities=21%  Similarity=0.228  Sum_probs=47.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      |.|+ |.+|+..++.+...|++|++++|+.++++.+...+     +..   +..+..+.+.+.+.+       ...|+||
T Consensus       172 ViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~---v~~~~~~~~~l~~~l-------~~aDvVI  235 (370)
T TIGR00518       172 IIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGR---IHTRYSNAYEIEDAV-------KRADLLI  235 (370)
T ss_pred             EEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Cce---eEeccCCHHHHHHHH-------ccCCEEE
Confidence            5555 79999999999999999999999988766544332     121   223444544443333       2579999


Q ss_pred             EccccC
Q 023054           82 NNAGIM   87 (288)
Q Consensus        82 ~~ag~~   87 (288)
                      ++++..
T Consensus       236 ~a~~~~  241 (370)
T TIGR00518       236 GAVLIP  241 (370)
T ss_pred             EccccC
Confidence            988653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14968 putative methyltransferase; Provisional

Probab=95.72  E-value=0.12  Score=40.96  Aligned_cols=65  Identities=18%  Similarity=0.099  Sum_probs=44.1

Q ss_pred             HHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCc-eEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccccCC
Q 023054           13 TARVLALRKAHVIIAARNMAAANEARQLILKEDDTAR-VDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMF   88 (288)
Q Consensus        13 ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~   88 (288)
                      ++..|++++.+|+.++++++..+...+.+.......+ +.++.+|+.+.         +.+  ..+|.++.|..+..
T Consensus        37 ~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--~~~d~vi~n~p~~~  102 (188)
T PRK14968         37 VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--DKFDVILFNPPYLP  102 (188)
T ss_pred             HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--cCceEEEECCCcCC
Confidence            4555666689999999999888777766654422222 78888887542         111  26899999987653

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.70  E-value=0.084  Score=45.20  Aligned_cols=73  Identities=19%  Similarity=0.220  Sum_probs=48.4

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |.| +||-|++++..|++.|+ +|++++|+.++.+++.+.+...++...+.  ..+.   .+.....       ...|+|
T Consensus       132 ilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~---~~~~~~~-------~~~div  198 (283)
T PRK14027        132 QVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDA---RGIEDVI-------AAADGV  198 (283)
T ss_pred             EEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCH---hHHHHHH-------hhcCEE
Confidence            445 48999999999999997 79999999999988887765443221121  1222   1221111       247999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      ||+....
T Consensus       199 INaTp~G  205 (283)
T PRK14027        199 VNATPMG  205 (283)
T ss_pred             EEcCCCC
Confidence            9987543

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.66  E-value=0.064  Score=46.79  Aligned_cols=154  Identities=11%  Similarity=0.022  Sum_probs=83.2

Q ss_pred             cccCCChhHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhhC-CCC-ceEEEEecCCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKA-------HVIIAARNM--AAANEARQLILKED-DTA-RVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~-~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |+|++|.+|.+++..|+..|.       .+++++.++  +.++.....+.... +.. .+..     +. +.    .+. 
T Consensus         8 IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~~-~~----~~~-   76 (323)
T TIGR01759         8 VTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-----TT-DP----EEA-   76 (323)
T ss_pred             EECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-----ec-Ch----HHH-
Confidence            789999999999999998884       799999865  33444444443321 110 1111     10 11    111 


Q ss_pred             HhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcc
Q 023054           71 IALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIR  150 (288)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  150 (288)
                         ....|+||..||.....    .+.-.+.+..|..    +.+.+.+.+.+...   +.+.|+++|-+.-.+.      
T Consensus        77 ---~~daDvVVitAG~~~k~----g~tR~dll~~Na~----i~~~i~~~i~~~~~---~~~iiivvsNPvDv~t------  136 (323)
T TIGR01759        77 ---FKDVDAALLVGAFPRKP----GMERADLLSKNGK----IFKEQGKALNKVAK---KDVKVLVVGNPANTNA------  136 (323)
T ss_pred             ---hCCCCEEEEeCCCCCCC----CCcHHHHHHHHHH----HHHHHHHHHHhhCC---CCeEEEEeCCcHHHHH------
Confidence               23689999999975321    1233455555544    44555555544320   0467777775432221      


Q ss_pred             ccCCCCCC-CCCccccchhhHHHHHHHHHHHHHHhccc
Q 023054          151 FQKINDRA-GYSDKKAYGQSKLANILHANELSRRFQEE  187 (288)
Q Consensus       151 ~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  187 (288)
                       .-..... +++.....+.+..=-..|-..+++.++-.
T Consensus       137 -~v~~k~s~g~p~~rViG~t~LDs~R~r~~la~~l~v~  173 (323)
T TIGR01759       137 -LIASKNAPDIPPKNFSAMTRLDHNRAKYQLAAKAGVP  173 (323)
T ss_pred             -HHHHHHcCCCCHHHEEEeeHHHHHHHHHHHHHHhCcC
Confidence             0001122 45555666654433345566666666654

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.60  E-value=0.074  Score=38.67  Aligned_cols=69  Identities=17%  Similarity=0.168  Sum_probs=50.6

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      |.|. +.+|+.+++.|.+.+.+|++++++++..++..+.        .+.++..|.++++.++++--      .+.+.+|
T Consensus         3 I~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~--------~~~~i~gd~~~~~~l~~a~i------~~a~~vv   67 (116)
T PF02254_consen    3 IIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE--------GVEVIYGDATDPEVLERAGI------EKADAVV   67 (116)
T ss_dssp             EES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT--------TSEEEES-TTSHHHHHHTTG------GCESEEE
T ss_pred             EEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc--------ccccccccchhhhHHhhcCc------cccCEEE
Confidence            4454 6899999999999777999999999876655432        27789999999887776521      2577777


Q ss_pred             Eccc
Q 023054           82 NNAG   85 (288)
Q Consensus        82 ~~ag   85 (288)
                      ...+
T Consensus        68 ~~~~   71 (116)
T PF02254_consen   68 ILTD   71 (116)
T ss_dssp             EESS
T ss_pred             EccC
Confidence            6654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.59  E-value=0.13  Score=46.73  Aligned_cols=113  Identities=10%  Similarity=-0.040  Sum_probs=71.2

Q ss_pred             cccCCChhHHHHHHHHHHC-------CC--EEEEEeCChHHHHHHHHHHHhhC-CC-CceEEEEecCCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALR-------KA--HVIIAARNMAAANEARQLILKED-DT-ARVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |+|++|.+|.+++..|+..       |.  ++++++++++.++.....+.... +- .++.+. .  .+.       +. 
T Consensus       105 IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~y-------e~-  173 (444)
T PLN00112        105 VSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I--DPY-------EV-  173 (444)
T ss_pred             EECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CCH-------HH-
Confidence            7999999999999999988       65  79999999999887777666532 11 111111 1  121       11 


Q ss_pred             HhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHH-hhccCCCCCeEEEEcCcc
Q 023054           71 IALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR-TAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~~~g~iv~vsS~~  140 (288)
                         +...|++|..||.....    ...-.+.++.|..    +++...+.+.+ ..    +.+.||++|-+.
T Consensus       174 ---~kdaDiVVitAG~prkp----G~tR~dLl~~N~~----I~k~i~~~I~~~a~----p~~ivIVVsNPv  229 (444)
T PLN00112        174 ---FQDAEWALLIGAKPRGP----GMERADLLDINGQ----IFAEQGKALNEVAS----RNVKVIVVGNPC  229 (444)
T ss_pred             ---hCcCCEEEECCCCCCCC----CCCHHHHHHHHHH----HHHHHHHHHHHhcC----CCeEEEEcCCcH
Confidence               23689999999975331    1233445555544    44555555544 22    156778777654

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.57  E-value=0.3  Score=42.20  Aligned_cols=153  Identities=12%  Similarity=0.152  Sum_probs=86.0

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |.|+ |.||..++..|+..+.  .+++++++++.++.....+....+  ..++.+..   .+.       +.    ....
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~-------~~----~~da   65 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GDY-------SD----CKDA   65 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CCH-------HH----HCCC
Confidence            4564 8999999999998875  699999998877766666654321  11222221   221       11    2368


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |++|..||....+    ...-.+.+..|..    +++.+.+.+.+..    +.+.|+++|-+.-.+..       -+...
T Consensus        66 DivVitag~~rk~----g~~R~dll~~N~~----i~~~~~~~i~~~~----p~~~vivvsNP~d~~t~-------~~~~~  126 (299)
T TIGR01771        66 DLVVITAGAPQKP----GETRLELVGRNVR----IMKSIVPEVVKSG----FDGIFLVATNPVDILTY-------VAWKL  126 (299)
T ss_pred             CEEEECCCCCCCC----CCCHHHHHHHHHH----HHHHHHHHHHHhC----CCeEEEEeCCHHHHHHH-------HHHHH
Confidence            9999999975432    1223345555544    4444444444432    15788888876544320       00111


Q ss_pred             CCCCccccchh-hHHHHHHHHHHHHHHhcccC
Q 023054          158 AGYSDKKAYGQ-SKLANILHANELSRRFQEEG  188 (288)
Q Consensus       158 ~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~~  188 (288)
                      .++++...++. +..=-..+-..+++.++...
T Consensus       127 sg~p~~~viG~gt~LDs~R~~~~la~~l~v~~  158 (299)
T TIGR01771       127 SGFPKNRVIGSGTVLDTARLRYLLAEKLGVDP  158 (299)
T ss_pred             hCCCHHHEEeccchHHHHHHHHHHHHHhCcCc
Confidence            23444444554 22223456666777766443

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.50  E-value=0.22  Score=46.10  Aligned_cols=103  Identities=24%  Similarity=0.201  Sum_probs=63.6

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-------------HHHHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-------------ASIKDFAQNFI   71 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-------------~~~~~~~~~~~   71 (288)
                      |.|.+|...+..+...|+.|+++++++++++.... +     +..  ++..|..+.             +..+...+.+.
T Consensus       172 GaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~--~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~  243 (509)
T PRK09424        172 GAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAE--FLELDFEEEGGSGDGYAKVMSEEFIKAEMALFA  243 (509)
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCe--EEEeccccccccccchhhhcchhHHHHHHHHHH
Confidence            56899999999999999999999999988775443 3     333  222333221             11122222223


Q ss_pred             hcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCc
Q 023054           72 ALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSI  139 (288)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  139 (288)
                      +.....|++|.++|.....                 ++..+++..+..|+.       ++.|+.++..
T Consensus       244 ~~~~gaDVVIetag~pg~~-----------------aP~lit~~~v~~mkp-------GgvIVdvg~~  287 (509)
T PRK09424        244 EQAKEVDIIITTALIPGKP-----------------APKLITAEMVASMKP-------GSVIVDLAAE  287 (509)
T ss_pred             hccCCCCEEEECCCCCccc-----------------CcchHHHHHHHhcCC-------CCEEEEEccC
Confidence            3335799999999975421                 122233555555654       6788888764

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.49  E-value=0.029  Score=42.76  Aligned_cols=40  Identities=18%  Similarity=0.207  Sum_probs=33.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLIL   42 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~   42 (288)
                      +.+|+++-+|++||..|+++|.+|+++  +++..+.+..++.
T Consensus         2 ~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~   41 (164)
T PF12076_consen    2 FLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP   41 (164)
T ss_pred             eecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence            468999999999999999999999999  6666666665553

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.46  E-value=0.011  Score=47.94  Aligned_cols=38  Identities=29%  Similarity=0.320  Sum_probs=32.0

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQL   40 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~   40 (288)
                      |+|. |.+|+++++.|.+.|++|++.+++.+..++..+.
T Consensus        33 I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          33 VQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             EECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            5666 5899999999999999999999998877666553

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.42  E-value=0.2  Score=43.46  Aligned_cols=152  Identities=14%  Similarity=0.170  Sum_probs=81.0

Q ss_pred             cccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |.|+ |.+|..++..|+.+|  ..|++++++++..+.....+....+ ........   .+.+       .    ..+.|
T Consensus         5 IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-------~----l~~aD   69 (308)
T cd05292           5 IVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-------D----CKGAD   69 (308)
T ss_pred             EECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-------H----hCCCC
Confidence            5676 899999999999999  5899999998876643433433211 01111111   1211       1    23689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|.++|.....    .+...+.+..|    ..+.+.+.+.+.+..    +.|.|++++.....+...       +....
T Consensus        70 iViita~~~~~~----~~~r~dl~~~n----~~i~~~~~~~l~~~~----~~giiiv~tNP~d~~~~~-------~~~~s  130 (308)
T cd05292          70 VVVITAGANQKP----GETRLDLLKRN----VAIFKEIIPQILKYA----PDAILLVVTNPVDVLTYV-------AYKLS  130 (308)
T ss_pred             EEEEccCCCCCC----CCCHHHHHHHH----HHHHHHHHHHHHHHC----CCeEEEEecCcHHHHHHH-------HHHHH
Confidence            999999975321    12223333333    444555555554432    157888887654333100       00112


Q ss_pred             CCCccccchhhHHH-HHHHHHHHHHHhccc
Q 023054          159 GYSDKKAYGQSKLA-NILHANELSRRFQEE  187 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a-~~~~~~~la~~~~~~  187 (288)
                      ++++...++..-.- -..+-..+++.++..
T Consensus       131 g~p~~~viG~gt~LDs~R~~~~la~~~~v~  160 (308)
T cd05292         131 GLPPNRVIGSGTVLDTARFRYLLGEHLGVD  160 (308)
T ss_pred             CcCHHHeecccchhhHHHHHHHHHHHhCCC
Confidence            34444555542211 234555566666544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.36  E-value=0.073  Score=46.95  Aligned_cols=75  Identities=12%  Similarity=0.190  Sum_probs=47.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||.||++|+|.+.++-....|+..+++.++.+..+ ..+++     +..   ...|..+++.++.+.+..   .+++|+|
T Consensus       162 Lv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l-----GAd---~vvdy~~~~~~e~~kk~~---~~~~DvV  229 (347)
T KOG1198|consen  162 LVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL-----GAD---EVVDYKDENVVELIKKYT---GKGVDVV  229 (347)
T ss_pred             EEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc-----CCc---EeecCCCHHHHHHHHhhc---CCCccEE
Confidence            68999999999977776677855555555555443 23332     221   235777744444433322   4589999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      +-|.|-.
T Consensus       230 lD~vg~~  236 (347)
T KOG1198|consen  230 LDCVGGS  236 (347)
T ss_pred             EECCCCC
Confidence            9999864

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=95.31  E-value=0.15  Score=47.20  Aligned_cols=77  Identities=22%  Similarity=0.176  Sum_probs=50.8

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCC-------------ChHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS-------------SIASIKDFAQ   68 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------------~~~~~~~~~~   68 (288)
                      |.| .|.+|...+..+...|+.|++++++.++++.... +     +  ..++..|..             +.+..+...+
T Consensus       169 ViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l-----G--a~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       169 VIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M-----G--AEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             EEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----C--CeEEeccccccccccccceeecCHHHHHHHHH
Confidence            556 5899999999999999999999999887654432 2     2  233444432             1233333344


Q ss_pred             HHHhcCCCcceEEEccccC
Q 023054           69 NFIALNLPLNILINNAGIM   87 (288)
Q Consensus        69 ~~~~~~~~id~lv~~ag~~   87 (288)
                      .+.+.....|++|+++-+.
T Consensus       240 ~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHhCCCCEEEECcccC
Confidence            4444556799999999443

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.26  E-value=0.16  Score=41.14  Aligned_cols=28  Identities=25%  Similarity=0.375  Sum_probs=24.2

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARN   30 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~   30 (288)
                      |.| .||+|..++..|++.|. +|++++.+
T Consensus        26 IvG-~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        26 ICG-LGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             EEC-cCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            444 48999999999999998 69999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.22  E-value=0.051  Score=43.20  Aligned_cols=41  Identities=24%  Similarity=0.280  Sum_probs=33.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILK   43 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~   43 (288)
                      |.|| |-+|+.+|..++..|++|++.+++++.+++..+.+.+
T Consensus         4 ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    4 VIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             EEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4555 8999999999999999999999999988777766654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.22  E-value=0.17  Score=42.06  Aligned_cols=26  Identities=35%  Similarity=0.470  Sum_probs=22.5

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARN   30 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~   30 (288)
                      |.||+|.++++.|+..|. ++.+++.+
T Consensus         6 G~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           6 GAGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            578999999999999997 68887764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK05442 malate dehydrogenase; Provisional

Probab=95.21  E-value=0.055  Score=47.26  Aligned_cols=155  Identities=11%  Similarity=0.002  Sum_probs=82.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC-------EEEEEeCChH--HHHHHHHHHHhhC-CC-CceEEEEecCCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKA-------HVIIAARNMA--AANEARQLILKED-DT-ARVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~-~~-~~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |+|++|.+|..++..|+..|.       .+++++.++.  .++.....+.... +. .++.+     +. +.    .   
T Consensus         9 IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~~-~~----y---   75 (326)
T PRK05442          9 VTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----TD-DP----N---   75 (326)
T ss_pred             EECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----ec-Ch----H---
Confidence            789999999999999998764       6999998543  2332222232211 10 01111     10 11    1   


Q ss_pred             HhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcc
Q 023054           71 IALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIR  150 (288)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  150 (288)
                       +....-|++|.+||.....    .+.-.+.+..|.    .+.+.+.+.+.+..   ++.+.++++|-+.-.+..     
T Consensus        76 -~~~~daDiVVitaG~~~k~----g~tR~dll~~Na----~i~~~i~~~i~~~~---~~~~iiivvsNPvDv~t~-----  138 (326)
T PRK05442         76 -VAFKDADVALLVGARPRGP----GMERKDLLEANG----AIFTAQGKALNEVA---ARDVKVLVVGNPANTNAL-----  138 (326)
T ss_pred             -HHhCCCCEEEEeCCCCCCC----CCcHHHHHHHHH----HHHHHHHHHHHHhC---CCCeEEEEeCCchHHHHH-----
Confidence             1224689999999975331    123344555554    45555666555521   014677877765422210     


Q ss_pred             ccCCCCCC-CCCccccchhhHHHHHHHHHHHHHHhcccC
Q 023054          151 FQKINDRA-GYSDKKAYGQSKLANILHANELSRRFQEEG  188 (288)
Q Consensus       151 ~~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~  188 (288)
                        -..... +++.....+.+-.=-..|-..+++.+.-..
T Consensus       139 --v~~k~s~g~p~~rViG~t~LDs~R~r~~la~~l~v~~  175 (326)
T PRK05442        139 --IAMKNAPDLPAENFTAMTRLDHNRALSQLAAKAGVPV  175 (326)
T ss_pred             --HHHHHcCCCCHHHEEeeeHHHHHHHHHHHHHHhCcCh
Confidence              000112 455555555544333455666677766543

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.18  E-value=0.19  Score=44.73  Aligned_cols=72  Identities=15%  Similarity=0.310  Sum_probs=49.0

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARN-------------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |.||+|..+++.|+..|. ++++++.+                   ..+.+.+.+.+.+.+|..+++.+...++. +.+.
T Consensus        48 G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i~~-~~~~  126 (370)
T PRK05600         48 GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERLTA-ENAV  126 (370)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeecCH-HHHH
Confidence            568999999999999997 78888765                   24555666677777777777777666652 2333


Q ss_pred             HHHHHHHhcCCCcceEEEcc
Q 023054           65 DFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~a   84 (288)
                      ++++       ..|+||.+.
T Consensus       127 ~~~~-------~~DlVid~~  139 (370)
T PRK05600        127 ELLN-------GVDLVLDGS  139 (370)
T ss_pred             HHHh-------CCCEEEECC
Confidence            3322       456666554

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.13  E-value=0.089  Score=45.04  Aligned_cols=40  Identities=20%  Similarity=0.203  Sum_probs=34.2

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLIL   42 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~   42 (288)
                      |.| +||.|++++..|++.|+ +|++++|+.++++++.+.+.
T Consensus       130 vlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       130 VIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             EEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            444 59999999999999997 69999999999888877653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.12  E-value=0.21  Score=41.70  Aligned_cols=55  Identities=13%  Similarity=0.266  Sum_probs=36.6

Q ss_pred             cCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCC
Q 023054            4 GGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLS   58 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~   58 (288)
                      =|.||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+...++
T Consensus        30 vG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~  104 (240)
T TIGR02355        30 VGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLD  104 (240)
T ss_pred             ECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCC
Confidence            3678999999999999997 688877643                   233444455555555555555544443

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK08328 hypothetical protein; Provisional

Probab=95.11  E-value=0.26  Score=40.83  Aligned_cols=27  Identities=22%  Similarity=0.400  Sum_probs=23.2

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM   31 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~   31 (288)
                      |.||+|.++++.|+..|. ++++++.+.
T Consensus        34 G~GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         34 GVGGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            578999999999999997 688887653

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.09  E-value=0.089  Score=52.68  Aligned_cols=71  Identities=23%  Similarity=0.315  Sum_probs=54.6

Q ss_pred             cccCCChhHHHHHHHHHHCC-CE-------------EEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRK-AH-------------VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFA   67 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   67 (288)
                      |.|+ |.||+..++.|++.. +.             |++++++.+.++++.+..      .++..+++|++|.+++.+++
T Consensus       574 VLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~------~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        574 ILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI------ENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             EECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc------CCCceEEeecCCHHHHHHhh
Confidence            5665 999999999999753 33             888999988777665542      24678899999988777665


Q ss_pred             HHHHhcCCCcceEEEcccc
Q 023054           68 QNFIALNLPLNILINNAGI   86 (288)
Q Consensus        68 ~~~~~~~~~id~lv~~ag~   86 (288)
                      +       .+|+||++...
T Consensus       647 ~-------~~DaVIsalP~  658 (1042)
T PLN02819        647 S-------QVDVVISLLPA  658 (1042)
T ss_pred             c-------CCCEEEECCCc
Confidence            4       58999998865

>PRK08223 hypothetical protein; Validated

Probab=95.08  E-value=0.16  Score=43.31  Aligned_cols=54  Identities=15%  Similarity=0.167  Sum_probs=35.8

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLS   58 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~   58 (288)
                      |.||+|..++..|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..+++.+...++
T Consensus        34 G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l~  107 (287)
T PRK08223         34 GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGIG  107 (287)
T ss_pred             CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            578999999999999997 688887653                   233334444445555555555555454

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.06  E-value=0.13  Score=44.42  Aligned_cols=163  Identities=12%  Similarity=0.086  Sum_probs=86.3

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCce-EEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARV-DTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|| |+||.+++..|+.++.  .+++++.+++.++-....+....+.... ..+..| .+.       +.    ..+-|
T Consensus         5 viGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y-------~~----~~~aD   71 (313)
T COG0039           5 VIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDY-------ED----LKGAD   71 (313)
T ss_pred             EECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CCh-------hh----hcCCC
Confidence            7899 9999999999988874  7999999976666555545432111111 111122 111       11    13689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|..||....+-    ..-.+.+..|..-.-.+.+.+..+-.        .+.|++++-+.-.+.+..       ....
T Consensus        72 iVvitAG~prKpG----mtR~DLl~~Na~I~~~i~~~i~~~~~--------d~ivlVvtNPvD~~ty~~-------~k~s  132 (313)
T COG0039          72 IVVITAGVPRKPG----MTRLDLLEKNAKIVKDIAKAIAKYAP--------DAIVLVVTNPVDILTYIA-------MKFS  132 (313)
T ss_pred             EEEEeCCCCCCCC----CCHHHHHHhhHHHHHHHHHHHHhhCC--------CeEEEEecCcHHHHHHHH-------HHhc
Confidence            9999999875432    22345666665544444444433221        467777776543321000       0111


Q ss_pred             CCCccc-cchhhHHHHHHHHHHHHHHhcccCCceEEEEe
Q 023054          159 GYSDKK-AYGQSKLANILHANELSRRFQEEGVNITANSV  196 (288)
Q Consensus       159 ~~~~~~-~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v  196 (288)
                      +.+... .-..+..--..|-..++..+.....+|+...|
T Consensus       133 g~p~~rvig~gt~LDsaR~~~~lae~~~v~~~~V~~~Vi  171 (313)
T COG0039         133 GFPKNRVIGSGTVLDSARFRTFLAEKLGVSPKDVHAYVI  171 (313)
T ss_pred             CCCccceecccchHHHHHHHHHHHHHhCCChhHceeeEe
Confidence            122222 22333334445566677777654333544443

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.06  E-value=0.13  Score=44.26  Aligned_cols=42  Identities=17%  Similarity=0.119  Sum_probs=32.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCCh---HHHHHHHHHHHh
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNM---AAANEARQLILK   43 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~---~~~~~~~~~~~~   43 (288)
                      +|.|+ ||-+++++..|+..|+ +|++++|+.   ++++++.+.+..
T Consensus       128 lvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        128 VLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             EEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            35564 7779999999999997 799999995   466666665543

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.03  E-value=0.28  Score=36.31  Aligned_cols=66  Identities=23%  Similarity=0.334  Sum_probs=44.8

Q ss_pred             hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC--CCcceEEEccc
Q 023054            8 GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN--LPLNILINNAG   85 (288)
Q Consensus         8 gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~id~lv~~ag   85 (288)
                      |||...+..+...|++|+++++++++.+.+.+ +     +..   ..+|..+.+    +.+++++..  .++|++|.|+|
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~-----Ga~---~~~~~~~~~----~~~~i~~~~~~~~~d~vid~~g   67 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-L-----GAD---HVIDYSDDD----FVEQIRELTGGRGVDVVIDCVG   67 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-T-----TES---EEEETTTSS----HHHHHHHHTTTSSEEEEEESSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-h-----ccc---ccccccccc----cccccccccccccceEEEEecC
Confidence            68999888888899999999999887655432 2     211   124555544    334444433  36999999998


Q ss_pred             c
Q 023054           86 I   86 (288)
Q Consensus        86 ~   86 (288)
                      .
T Consensus        68 ~   68 (130)
T PF00107_consen   68 S   68 (130)
T ss_dssp             S
T ss_pred             c
Confidence            3

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PLN02602 lactate dehydrogenase

Probab=95.01  E-value=0.42  Score=42.25  Aligned_cols=160  Identities=12%  Similarity=0.150  Sum_probs=86.4

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCC-CceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDT-ARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|+ |.||.+++..|+..|.  .+++++.+++.++.....+....+- ....+. .+ .+       .+.    ...-|
T Consensus        42 IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~~-~d-------y~~----~~daD  107 (350)
T PLN02602         42 VVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-AS-TD-------YAV----TAGSD  107 (350)
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-eC-CC-------HHH----hCCCC
Confidence            6785 9999999999998885  6999999988776666656543211 112221 11 12       111    13689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|..||.....    .+.-.+.+..|    .-+++.+.+.+.+..    +.+.+++++-+.-.+...       .....
T Consensus       108 iVVitAG~~~k~----g~tR~dll~~N----~~I~~~i~~~I~~~~----p~~ivivvtNPvdv~t~~-------~~k~s  168 (350)
T PLN02602        108 LCIVTAGARQIP----GESRLNLLQRN----VALFRKIIPELAKYS----PDTILLIVSNPVDVLTYV-------AWKLS  168 (350)
T ss_pred             EEEECCCCCCCc----CCCHHHHHHHH----HHHHHHHHHHHHHHC----CCeEEEEecCchHHHHHH-------HHHHh
Confidence            999999975432    11223344444    445555555554432    157788888655433200       01112


Q ss_pred             CCCccccchhh-HHHHHHHHHHHHHHhcccCCceEEE
Q 023054          159 GYSDKKAYGQS-KLANILHANELSRRFQEEGVNITAN  194 (288)
Q Consensus       159 ~~~~~~~Y~~s-K~a~~~~~~~la~~~~~~~~~i~v~  194 (288)
                      +++.....+.. -.=-..+-..+++.++..-..|+..
T Consensus       169 g~p~~rviG~gt~LDs~R~r~~lA~~l~v~~~~V~~~  205 (350)
T PLN02602        169 GFPANRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAY  205 (350)
T ss_pred             CCCHHHEEeecchHHHHHHHHHHHHHhCCCccceeee
Confidence            34444444443 2222345566677666543234443

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=94.94  E-value=0.13  Score=44.18  Aligned_cols=74  Identities=16%  Similarity=0.286  Sum_probs=47.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+++++|.+++..+...|++|+++.++++..+.+ .++     +...   ..+....+....+.... . ..++|.+
T Consensus       144 lv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~~~~~-~-~~~~d~~  212 (325)
T TIGR02824       144 LIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-----GADI---AINYREEDFVEVVKAET-G-GKGVDVI  212 (325)
T ss_pred             EEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCcE---EEecCchhHHHHHHHHc-C-CCCeEEE
Confidence            5899999999999999999999999999988765532 222     2211   12333333333332221 1 1359999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |+++|
T Consensus       213 i~~~~  217 (325)
T TIGR02824       213 LDIVG  217 (325)
T ss_pred             EECCc
Confidence            99887

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=94.93  E-value=0.33  Score=39.24  Aligned_cols=54  Identities=19%  Similarity=0.313  Sum_probs=36.3

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh---------------------HHHHHHHHHHHhhCCCCceEEEEecCC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM---------------------AAANEARQLILKEDDTARVDTLKLDLS   58 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~   58 (288)
                      |.||+|.++++.|+..|. ++++++.+.                     .+.+.+.+.+++.+|..+++.+..++.
T Consensus        26 G~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~~~  101 (198)
T cd01485          26 GAGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEEDSL  101 (198)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecccc
Confidence            456799999999999998 588886542                     123344555556666666666655554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=94.86  E-value=0.11  Score=45.15  Aligned_cols=73  Identities=11%  Similarity=0.209  Sum_probs=47.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||++++|..+++.....|++|+.+++++++.+.+.+ +     +.. .+  .|..+.+..+.+ .++.  ..++|++
T Consensus       148 lI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~-----Ga~-~v--i~~~~~~~~~~v-~~~~--~~gvd~v  215 (329)
T cd08294         148 VVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L-----GFD-AV--FNYKTVSLEEAL-KEAA--PDGIDCY  215 (329)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC-EE--EeCCCccHHHHH-HHHC--CCCcEEE
Confidence            589999999999888777889999999988876554432 2     222 12  244443333332 2221  1368999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       216 ld~~g  220 (329)
T cd08294         216 FDNVG  220 (329)
T ss_pred             EECCC
Confidence            98776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli

Probab=94.84  E-value=0.42  Score=37.65  Aligned_cols=74  Identities=9%  Similarity=0.033  Sum_probs=57.0

Q ss_pred             HHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccccC
Q 023054           12 ETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIM   87 (288)
Q Consensus        12 ~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   87 (288)
                      .+.....+++.+|++++-+++.++++.+.+.+.||+-++.....=.-+.++.+++++.+.+.  ++|+|+..-|..
T Consensus        39 ~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~--~pdiv~vglG~P  112 (172)
T PF03808_consen   39 DLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINAS--GPDIVFVGLGAP  112 (172)
T ss_pred             HHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHc--CCCEEEEECCCC
Confidence            44555556789999999999999999999999998776654433223777778888887765  689999888754

Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=94.82  E-value=0.12  Score=47.07  Aligned_cols=68  Identities=18%  Similarity=0.323  Sum_probs=46.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|+ |.+|..+++.|...|+ +|++++|+.++++.+...+     +..  ++     +.++....+       ...|+
T Consensus       186 lViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~-----g~~--~~-----~~~~~~~~l-------~~aDv  245 (423)
T PRK00045        186 LVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF-----GGE--AI-----PLDELPEAL-------AEADI  245 (423)
T ss_pred             EEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc--Ee-----eHHHHHHHh-------ccCCE
Confidence            35655 9999999999999997 7999999998877666553     211  11     222222222       25799


Q ss_pred             EEEccccCC
Q 023054           80 LINNAGIMF   88 (288)
Q Consensus        80 lv~~ag~~~   88 (288)
                      ||.+.|...
T Consensus       246 VI~aT~s~~  254 (423)
T PRK00045        246 VISSTGAPH  254 (423)
T ss_pred             EEECCCCCC
Confidence            999987543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=94.81  E-value=0.07  Score=43.83  Aligned_cols=40  Identities=30%  Similarity=0.369  Sum_probs=34.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI   41 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~   41 (288)
                      |.||+|.+|.+++..|++.|++|++.+|++++.+......
T Consensus         5 IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         5 VLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            6788999999999999999999999999988877665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.81  E-value=0.33  Score=43.35  Aligned_cols=114  Identities=11%  Similarity=-0.034  Sum_probs=68.0

Q ss_pred             cccCCChhHHHHHHHHHHCCC-E----EEE----EeCChHHHHHHHHHHHhhC-CCC-ceEEEEecCCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKA-H----VII----AARNMAAANEARQLILKED-DTA-RVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~----V~~----~~r~~~~~~~~~~~~~~~~-~~~-~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |+|++|.+|.++|..|+..|. .    |.+    ++++++.++.....+.... +-. ++.+..   .+       .+. 
T Consensus        49 IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~---~~-------y~~-  117 (387)
T TIGR01757        49 VSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI---DP-------YEV-  117 (387)
T ss_pred             EECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec---CC-------HHH-
Confidence            799999999999999998874 3    444    4888888887666665532 111 111111   11       111 


Q ss_pred             HhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           71 IALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                         ....|++|..||.....    .+.-.+.+..|.    .+.+.+.+.+.+..   ++.+.||++|-+.
T Consensus       118 ---~kdaDIVVitAG~prkp----g~tR~dll~~N~----~I~k~i~~~I~~~a---~~~~iviVVsNPv  173 (387)
T TIGR01757       118 ---FEDADWALLIGAKPRGP----GMERADLLDING----QIFADQGKALNAVA---SKNCKVLVVGNPC  173 (387)
T ss_pred             ---hCCCCEEEECCCCCCCC----CCCHHHHHHHHH----HHHHHHHHHHHHhC---CCCeEEEEcCCcH
Confidence               23689999999975332    122344555554    44555555554421   1156788887654

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=94.79  E-value=1.2  Score=38.89  Aligned_cols=120  Identities=11%  Similarity=0.103  Sum_probs=66.4

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhh--CCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKE--DDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |.| +|.+|..++..++..|. .|++++.+++.++.....+...  ..+....+..  -+|.       +.    ....|
T Consensus        11 IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~-------~~----l~~aD   76 (321)
T PTZ00082         11 LIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNY-------ED----IAGSD   76 (321)
T ss_pred             EEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCH-------HH----hCCCC
Confidence            677 58899999999999995 8999999887643211111111  0011122221  1221       11    13689


Q ss_pred             eEEEccccCCCCCCCCC-CcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           79 ILINNAGIMFCPYQISE-DGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                      +||.++|........+. ..-.+.+..|    ..+.+.+.+.+.+..    +++.++++|-+...+
T Consensus        77 iVI~tag~~~~~~~~~~~~~r~~~l~~n----~~i~~~i~~~i~~~~----p~a~~iv~sNP~di~  134 (321)
T PTZ00082         77 VVIVTAGLTKRPGKSDKEWNRDDLLPLN----AKIMDEVAEGIKKYC----PNAFVIVITNPLDVM  134 (321)
T ss_pred             EEEECCCCCCCCCCCcCCCCHHHHHHHH----HHHHHHHHHHHHHHC----CCeEEEEecCcHHHH
Confidence            99999998643211000 0123344444    345666666665542    145788887766443

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=94.78  E-value=0.12  Score=43.00  Aligned_cols=119  Identities=13%  Similarity=0.125  Sum_probs=69.5

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      |+|.+|..++.+.-+  ++|+.+.+.++..+.+.+.+....-..++.+++.|+.+......        ....|+||+|.
T Consensus        54 G~G~l~L~la~r~~~--a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~~~~--------~~~fD~Ii~NP  123 (248)
T COG4123          54 GNGALGLLLAQRTEK--AKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFLKALV--------FASFDLIICNP  123 (248)
T ss_pred             CcCHHHHHHhccCCC--CcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhhhccc--------ccccCEEEeCC
Confidence            345566655554433  78999999998888777777653335778999888775332211        22689999999


Q ss_pred             ccCCCCCCCCCCcchhhhhhhhhHHH-HHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           85 GIMFCPYQISEDGIEMQFATNHIGHF-LLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        85 g~~~~~~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      -+.......+++.....-+.-....+ .+++.....++.       +|++.+|....
T Consensus       124 Pyf~~~~~~~~~~~~~~Ar~e~~~~le~~i~~a~~~lk~-------~G~l~~V~r~e  173 (248)
T COG4123         124 PYFKQGSRLNENPLRAIARHEITLDLEDLIRAAAKLLKP-------GGRLAFVHRPE  173 (248)
T ss_pred             CCCCCccccCcChhhhhhhhhhcCCHHHHHHHHHHHccC-------CCEEEEEecHH
Confidence            88765443333333332222222211 133333333333       68888887654

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.69  E-value=0.34  Score=39.12  Aligned_cols=73  Identities=19%  Similarity=0.288  Sum_probs=46.9

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIA   61 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   61 (288)
                      |.| .+|+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..+++.+...+++  
T Consensus        26 IiG-~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~~~--  102 (197)
T cd01492          26 LIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDISE--  102 (197)
T ss_pred             EEc-CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCccc--
Confidence            444 67799999999999998 588886542                   2345556666677777767666655542  


Q ss_pred             HHHHHHHHHHhcCCCcceEEEcc
Q 023054           62 SIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        62 ~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      ...+++       ...|++|.+.
T Consensus       103 ~~~~~~-------~~~dvVi~~~  118 (197)
T cd01492         103 KPEEFF-------SQFDVVVATE  118 (197)
T ss_pred             cHHHHH-------hCCCEEEECC
Confidence            112222       2567777653

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=94.68  E-value=0.26  Score=40.33  Aligned_cols=149  Identities=16%  Similarity=0.049  Sum_probs=89.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ++-|+.+..|.++++.-.+.|..|.++.|+..+  ++.+.     ....+.++..|.-..+-.+...       .++..+
T Consensus        56 lvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~s-----w~~~vswh~gnsfssn~~k~~l-------~g~t~v  121 (283)
T KOG4288|consen   56 LVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLSS-----WPTYVSWHRGNSFSSNPNKLKL-------SGPTFV  121 (283)
T ss_pred             hhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhhC-----CCcccchhhccccccCcchhhh-------cCCccc
Confidence            467899999999999999999999999998652  22222     2466777777765433222111       245566


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      +-+.|.+..        ...+-++|-.......++..+.-         -.++++||......+              ++
T Consensus       122 ~e~~ggfgn--------~~~m~~ing~ani~a~kaa~~~g---------v~~fvyISa~d~~~~--------------~~  170 (283)
T KOG4288|consen  122 YEMMGGFGN--------IILMDRINGTANINAVKAAAKAG---------VPRFVYISAHDFGLP--------------PL  170 (283)
T ss_pred             HHHhcCccc--------hHHHHHhccHhhHHHHHHHHHcC---------CceEEEEEhhhcCCC--------------Cc
Confidence            666664422        23344555555555555543322         358999998664332              12


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT  203 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t  203 (288)
                      -+ ..|-.+|.+.+.   .+-..++     .+=..+.||+|-.
T Consensus       171 i~-rGY~~gKR~AE~---Ell~~~~-----~rgiilRPGFiyg  204 (283)
T KOG4288|consen  171 IP-RGYIEGKREAEA---ELLKKFR-----FRGIILRPGFIYG  204 (283)
T ss_pred             cc-hhhhccchHHHH---HHHHhcC-----CCceeeccceeec
Confidence            12 368889987553   2222333     3344589999954

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.66  E-value=0.1  Score=47.67  Aligned_cols=37  Identities=30%  Similarity=0.461  Sum_probs=32.2

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      |.||+|++|.++++.|.+.|++|++++|+++...+..
T Consensus         5 IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          5 IIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             EEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            7899999999999999999999999999987654433

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.54  E-value=0.16  Score=37.64  Aligned_cols=75  Identities=12%  Similarity=0.173  Sum_probs=51.6

Q ss_pred             CcccCCChhHHHHHHHHHH-CCCEEEE-EeCCh----------------------HHHHHHHHHHHhhCCCCceEEEEec
Q 023054            1 MLAGGASGIGLETARVLAL-RKAHVII-AARNM----------------------AAANEARQLILKEDDTARVDTLKLD   56 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~-~G~~V~~-~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~D   56 (288)
                      +|.|++|.+|+.+++.+.+ .+.+++. ++|+.                      ..++++.+.         . -+..|
T Consensus         4 ~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~---------~-DVvID   73 (124)
T PF01113_consen    4 GIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE---------A-DVVID   73 (124)
T ss_dssp             EEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-----------SEEEE
T ss_pred             EEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc---------C-CEEEE
Confidence            3789999999999999998 6777544 55655                      122222211         1 15679


Q ss_pred             CCChHHHHHHHHHHHhcCCCcceEEEccccC
Q 023054           57 LSSIASIKDFAQNFIALNLPLNILINNAGIM   87 (288)
Q Consensus        57 l~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   87 (288)
                      +|.++.+...++.+.+.  ++.+|+-..|..
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~~  102 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGFS  102 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSSH
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCCC
Confidence            99999999998888876  688888888863

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.49  E-value=0.19  Score=43.24  Aligned_cols=74  Identities=12%  Similarity=0.252  Sum_probs=47.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+++++|.++++.+...|++|++++++.++.+.+ ..+     +. -.++  |.........+.. ... ...+|.+
T Consensus       149 li~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~-~~~~--~~~~~~~~~~~~~-~~~-~~~~d~v  217 (328)
T cd08268         149 LITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL-----GA-AHVI--VTDEEDLVAEVLR-ITG-GKGVDVV  217 (328)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CC-CEEE--ecCCccHHHHHHH-HhC-CCCceEE
Confidence            5899999999999999999999999999987765544 222     22 1222  2222222222222 211 2259999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +++.|
T Consensus       218 i~~~~  222 (328)
T cd08268         218 FDPVG  222 (328)
T ss_pred             EECCc
Confidence            99887

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=94.42  E-value=0.17  Score=43.94  Aligned_cols=66  Identities=20%  Similarity=0.355  Sum_probs=45.4

Q ss_pred             cccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            2 LAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |.|+ |.+|..+++.|...| .+|++++|+.++.+++..++     +.  ..+     +.++..+.+.       ..|++
T Consensus       183 ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~--~~~-----~~~~~~~~l~-------~aDvV  242 (311)
T cd05213         183 VIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GG--NAV-----PLDELLELLN-------EADVV  242 (311)
T ss_pred             EECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CC--eEE-----eHHHHHHHHh-------cCCEE
Confidence            5665 999999999999877 47999999998877766654     22  122     2223333222       47999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      |.+.+..
T Consensus       243 i~at~~~  249 (311)
T cd05213         243 ISATGAP  249 (311)
T ss_pred             EECCCCC
Confidence            9998854

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=94.41  E-value=0.17  Score=45.90  Aligned_cols=68  Identities=18%  Similarity=0.382  Sum_probs=46.5

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|+ |.+|..+++.|...| .+|++++|+.+++++..+.+     +.  ..+  +   .++..+.+.       ..|+
T Consensus       184 lViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----g~--~~i--~---~~~l~~~l~-------~aDv  243 (417)
T TIGR01035       184 LLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----GG--EAV--K---FEDLEEYLA-------EADI  243 (417)
T ss_pred             EEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CC--eEe--e---HHHHHHHHh-------hCCE
Confidence            36665 999999999999999 68999999988776665543     22  122  1   123333322       5799


Q ss_pred             EEEccccCC
Q 023054           80 LINNAGIMF   88 (288)
Q Consensus        80 lv~~ag~~~   88 (288)
                      ||.+.+...
T Consensus       244 Vi~aT~s~~  252 (417)
T TIGR01035       244 VISSTGAPH  252 (417)
T ss_pred             EEECCCCCC
Confidence            999987543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=94.41  E-value=0.31  Score=41.76  Aligned_cols=55  Identities=20%  Similarity=0.229  Sum_probs=39.5

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSS   59 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   59 (288)
                      |.||+|.++++.|+..|. ++.+++.+.                   .+++.+.+.+.+.+|..++..+..++.+
T Consensus         6 GaGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           6 GAGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            478999999999999997 688875432                   3444555566666677777777666664

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=94.37  E-value=0.21  Score=43.89  Aligned_cols=71  Identities=14%  Similarity=0.125  Sum_probs=45.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|+|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +... +  .|..+.+ +.+    +.+..+.+|+
T Consensus       174 lV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l-----Ga~~-v--i~~~~~~-~~~----~~~~~g~~D~  238 (343)
T PRK09880        174 FVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM-----GADK-L--VNPQNDD-LDH----YKAEKGYFDV  238 (343)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc-----CCcE-E--ecCCccc-HHH----HhccCCCCCE
Confidence            47775 8999998887777898 6888999887765433 23     3221 2  2444322 222    2222346999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       239 vid~~G~  245 (343)
T PRK09880        239 SFEVSGH  245 (343)
T ss_pred             EEECCCC
Confidence            9999883

>PRK04148 hypothetical protein; Provisional

Probab=94.35  E-value=0.086  Score=39.51  Aligned_cols=45  Identities=22%  Similarity=0.214  Sum_probs=35.9

Q ss_pred             hHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChH
Q 023054            9 IGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA   61 (288)
Q Consensus         9 IG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   61 (288)
                      -|.++|..|++.|++|+.++.++...+...+.        .+.++..|+.+++
T Consensus        27 fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p~   71 (134)
T PRK04148         27 FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNPN   71 (134)
T ss_pred             CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCCC
Confidence            67789999999999999999999865554332        3678889998755

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=94.32  E-value=1.4  Score=38.24  Aligned_cols=117  Identities=15%  Similarity=0.070  Sum_probs=65.2

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCce-EEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARV-DTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |.|+ |-+|..+|..|+.+|. +|++++++++..+.....+....+.... ..+.. -+|.   +.    +    ...|+
T Consensus         6 VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d~---~~----~----~~aDi   72 (305)
T TIGR01763         6 VIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNNY---AD----T----ANSDI   72 (305)
T ss_pred             EECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCCH---HH----h----CCCCE
Confidence            5665 8899999999999886 8999999766444222112221110000 00110 0121   11    1    36799


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                      +|.++|.....    .+.-.+.+..|..-...+.+.+.++.   +     ++.||++|-+...+
T Consensus        73 VIitag~p~~~----~~sR~~l~~~N~~iv~~i~~~I~~~~---p-----~~~iIv~tNP~di~  124 (305)
T TIGR01763        73 VVITAGLPRKP----GMSREDLLSMNAGIVREVTGRIMEHS---P-----NPIIVVVSNPLDAM  124 (305)
T ss_pred             EEEcCCCCCCc----CCCHHHHHHHHHHHHHHHHHHHHHHC---C-----CeEEEEecCcHHHH
Confidence            99999975321    11223455556555555555554442   1     46888888876554

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family

Probab=94.32  E-value=0.73  Score=36.49  Aligned_cols=74  Identities=9%  Similarity=0.016  Sum_probs=56.0

Q ss_pred             HHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccccC
Q 023054           11 LETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIM   87 (288)
Q Consensus        11 ~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   87 (288)
                      ..++....++|.+|++++-+++.++++.+.+.+.+|+.++... ...-+++.-+++++++.+.  ++|+|+..-|..
T Consensus        38 ~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~-~g~f~~~~~~~i~~~I~~s--~~dil~VglG~P  111 (177)
T TIGR00696        38 EELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGA-FGPLEPEERKAALAKIARS--GAGIVFVGLGCP  111 (177)
T ss_pred             HHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEE-CCCCChHHHHHHHHHHHHc--CCCEEEEEcCCc
Confidence            3444445567889999999999999999999999988876665 3334555566777777764  689998877754

The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=94.32  E-value=0.075  Score=49.06  Aligned_cols=39  Identities=26%  Similarity=0.273  Sum_probs=33.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQL   40 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~   40 (288)
                      +|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.
T Consensus       336 lIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        336 AIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             EEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            47885 7999999999999999999999998877766554

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.28  E-value=0.21  Score=43.12  Aligned_cols=74  Identities=15%  Similarity=0.171  Sum_probs=48.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+++++|.++++.+...|++|+.++++.++.+.+ +++     +.. .+  .|..+.+..+.+.+..  ...++|++
T Consensus       147 lI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~--~~~~~~~~~~~~~~~~--~~~~~d~v  215 (324)
T cd08244         147 LVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GAD-VA--VDYTRPDWPDQVREAL--GGGGVTVV  215 (324)
T ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCC-EE--EecCCccHHHHHHHHc--CCCCceEE
Confidence            5899999999999888888999999999888776543 322     221 12  2444433333332211  11259999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +++.|
T Consensus       216 l~~~g  220 (324)
T cd08244         216 LDGVG  220 (324)
T ss_pred             EECCC
Confidence            98876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.23  E-value=0.073  Score=42.92  Aligned_cols=37  Identities=30%  Similarity=0.180  Sum_probs=30.4

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      ..||+|.||.+++++|++.|++|++.+|+.++..+..
T Consensus         5 ~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~   41 (211)
T COG2085           5 AIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAA   41 (211)
T ss_pred             EEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHH
Confidence            4689999999999999999999999977665544333

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=94.22  E-value=0.25  Score=43.11  Aligned_cols=68  Identities=19%  Similarity=0.290  Sum_probs=47.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|++ |+|...++.....|++|+.++|++++++.+.+.      +... +  .|-+|.+..+.+.+       ..|++
T Consensus       171 ~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l------GAd~-~--i~~~~~~~~~~~~~-------~~d~i  233 (339)
T COG1064         171 AVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL------GADH-V--INSSDSDALEAVKE-------IADAI  233 (339)
T ss_pred             EEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh------CCcE-E--EEcCCchhhHHhHh-------hCcEE
Confidence            478888 999987777777999999999999887755443      3322 2  23335555444433       27999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |.+++
T Consensus       234 i~tv~  238 (339)
T COG1064         234 IDTVG  238 (339)
T ss_pred             EECCC
Confidence            98887

>PRK07877 hypothetical protein; Provisional

Probab=94.22  E-value=0.25  Score=47.78  Aligned_cols=75  Identities=19%  Similarity=0.225  Sum_probs=53.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeCCh------------------HHHHHHHHHHHhhCCCCceEEEEecCCCh
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAARNM------------------AAANEARQLILKEDDTARVDTLKLDLSSI   60 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   60 (288)
                      +|.|.  |+|..++..|+..|.  ++++++.+.                  .+.+.+++.+.+.+|..++..+...++ .
T Consensus       111 ~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i~-~  187 (722)
T PRK07877        111 GVVGL--SVGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGLT-E  187 (722)
T ss_pred             EEEEe--cHHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccCC-H
Confidence            47788  499999999999994  788876532                  345556677777788888888888777 4


Q ss_pred             HHHHHHHHHHHhcCCCcceEEEccc
Q 023054           61 ASIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        61 ~~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      +.+.++++       ++|+||.|.-
T Consensus       188 ~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        188 DNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             HHHHHHhc-------CCCEEEECCC
Confidence            55555543       4677776553

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=94.19  E-value=1.1  Score=38.78  Aligned_cols=160  Identities=14%  Similarity=0.175  Sum_probs=81.3

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |.|+ |.+|..++..|+.+|. +|++++++++.++.....+.....  .....+ .. -+|   ...    +    ...|
T Consensus         3 IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~-t~d---~~~----l----~dAD   68 (300)
T cd01339           3 IIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TG-TND---YED----I----AGSD   68 (300)
T ss_pred             EECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EE-cCC---HHH----h----CCCC
Confidence            6788 8899999999998876 999999987755432222222110  111111 11 012   111    1    3679


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|.++|......    ..-.+.+.-|    +.+.+.+.+.+.+..    +++.+|++|-+...+...-       ....
T Consensus        69 iVIit~g~p~~~~----~~r~e~~~~n----~~i~~~i~~~i~~~~----p~~~iIv~sNP~di~t~~~-------~~~s  129 (300)
T cd01339          69 VVVITAGIPRKPG----MSRDDLLGTN----AKIVKEVAENIKKYA----PNAIVIVVTNPLDVMTYVA-------YKAS  129 (300)
T ss_pred             EEEEecCCCCCcC----CCHHHHHHHH----HHHHHHHHHHHHHHC----CCeEEEEecCcHHHHHHHH-------HHHh
Confidence            9999999753211    1112233333    455566666665532    1466777776554432000       0111


Q ss_pred             CCCccccchhhH-HHHHHHHHHHHHHhcccCCceEEE
Q 023054          159 GYSDKKAYGQSK-LANILHANELSRRFQEEGVNITAN  194 (288)
Q Consensus       159 ~~~~~~~Y~~sK-~a~~~~~~~la~~~~~~~~~i~v~  194 (288)
                      ++++....|.+- .--..+-..+++.+...-..|+..
T Consensus       130 ~~~~~rviGlgt~lds~r~~~~la~~l~v~~~~v~~~  166 (300)
T cd01339         130 GFPRNRVIGMAGVLDSARFRYFIAEELGVSVKDVQAM  166 (300)
T ss_pred             CCCHHHEEEecchHHHHHHHHHHHHHhCCCccceEEE
Confidence            334334444441 112245566777766543224443

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.19  E-value=0.63  Score=40.29  Aligned_cols=153  Identities=11%  Similarity=0.165  Sum_probs=79.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |.|+ |-+|..++..++.+|. +|++++++++.++.....+.....  ...... .. -+|.   .    .    ....|
T Consensus         7 VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i-~~-~~d~---~----~----~~~aD   72 (307)
T PRK06223          7 IIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKI-TG-TNDY---E----D----IAGSD   72 (307)
T ss_pred             EECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEE-Ee-CCCH---H----H----HCCCC
Confidence            6787 8899999999999875 899999988776543333322110  001111 10 1121   1    1    13679


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|.++|..... .   ..-.+.+.-    ...+.+.+.+.+.+...    ++.+|+++-+...+...-       ....
T Consensus        73 iVii~~~~p~~~-~---~~r~~~~~~----n~~i~~~i~~~i~~~~~----~~~viv~tNP~d~~~~~~-------~~~s  133 (307)
T PRK06223         73 VVVITAGVPRKP-G---MSRDDLLGI----NAKIMKDVAEGIKKYAP----DAIVIVVTNPVDAMTYVA-------LKES  133 (307)
T ss_pred             EEEECCCCCCCc-C---CCHHHHHHH----HHHHHHHHHHHHHHHCC----CeEEEEecCcHHHHHHHH-------HHHh
Confidence            999999875321 1   112233333    34455555555544321    456777776554432100       0111


Q ss_pred             CCCccccchhh-HHHHHHHHHHHHHHhccc
Q 023054          159 GYSDKKAYGQS-KLANILHANELSRRFQEE  187 (288)
Q Consensus       159 ~~~~~~~Y~~s-K~a~~~~~~~la~~~~~~  187 (288)
                      ++++....|.+ -.--..+-+.+++.+.-.
T Consensus       134 ~~~~~~viG~gt~lds~r~~~~la~~l~v~  163 (307)
T PRK06223        134 GFPKNRVIGMAGVLDSARFRTFIAEELNVS  163 (307)
T ss_pred             CCCcccEEEeCCCcHHHHHHHHHHHHhCcC
Confidence            34444444444 111225666777777654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.08  E-value=0.19  Score=46.09  Aligned_cols=71  Identities=18%  Similarity=0.162  Sum_probs=52.1

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      |.|+ |.+|+.+++.|.++|++|++++++++..++..++      ...+.++..|.++.+.+++.-      ..+.|.+|
T Consensus       236 IiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~------~~~~~~i~gd~~~~~~L~~~~------~~~a~~vi  302 (453)
T PRK09496        236 IVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE------LPNTLVLHGDGTDQELLEEEG------IDEADAFI  302 (453)
T ss_pred             EECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH------CCCCeEEECCCCCHHHHHhcC------CccCCEEE
Confidence            4565 9999999999999999999999998876654443      134667889999877655431      23577777


Q ss_pred             Eccc
Q 023054           82 NNAG   85 (288)
Q Consensus        82 ~~ag   85 (288)
                      .+.+
T Consensus       303 ~~~~  306 (453)
T PRK09496        303 ALTN  306 (453)
T ss_pred             ECCC
Confidence            5443

>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins

Probab=94.04  E-value=0.85  Score=35.87  Aligned_cols=74  Identities=9%  Similarity=0.039  Sum_probs=54.1

Q ss_pred             HHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccccC
Q 023054           12 ETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIM   87 (288)
Q Consensus        12 ~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   87 (288)
                      .+.+...+++.+|++++-+++.++++.+.+.+.+|+-++.....-..+.+.-.++++.+.+.  ++|+|+..-|..
T Consensus        37 ~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~i~~~I~~~--~pdiv~vglG~P  110 (171)
T cd06533          37 ALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEEIIERINAS--GADILFVGLGAP  110 (171)
T ss_pred             HHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHHHHHHHHHc--CCCEEEEECCCC
Confidence            44455556688999999999999999999999998877666433333344444467766654  689999888754

E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=93.92  E-value=0.27  Score=36.66  Aligned_cols=85  Identities=21%  Similarity=0.266  Sum_probs=49.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhC---C---CCceEEEEecCCChHHHHHHHHHHHhc-
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKED---D---TARVDTLKLDLSSIASIKDFAQNFIAL-   73 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~---~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   73 (288)
                      |.|+ |.+|.++++.|.+.|+.|..+ +|+.+..+++...+....   .   -.....+-+-+.| +.+..+++++... 
T Consensus        15 iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~La~~~   92 (127)
T PF10727_consen   15 IIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQLAQYG   92 (127)
T ss_dssp             EECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHHHHCC-
T ss_pred             EECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHHHHHhc
Confidence            3444 889999999999999998776 566656665555442110   0   1223444445555 4888888888775 


Q ss_pred             -CCCcceEEEccccCC
Q 023054           74 -NLPLNILINNAGIMF   88 (288)
Q Consensus        74 -~~~id~lv~~ag~~~   88 (288)
                       ..+=.+|||+.|...
T Consensus        93 ~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   93 AWRPGQIVVHTSGALG  108 (127)
T ss_dssp             -S-TT-EEEES-SS--
T ss_pred             cCCCCcEEEECCCCCh
Confidence             323358999999653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=93.86  E-value=0.35  Score=44.04  Aligned_cols=113  Identities=8%  Similarity=0.024  Sum_probs=66.1

Q ss_pred             CcccCCChhHHHHHHHHHHC---CC----EEEEEeC--ChHHHHHHHHHHHhhC-CCC-ceEEEEecCCChHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALR---KA----HVIIAAR--NMAAANEARQLILKED-DTA-RVDTLKLDLSSIASIKDFAQN   69 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~---G~----~V~~~~r--~~~~~~~~~~~~~~~~-~~~-~~~~~~~Dl~~~~~~~~~~~~   69 (288)
                      .||||+|-||+++.-.+++=   |.    .+++++.  +.+.++...-++.... |-. .+.+. .|  +   .+     
T Consensus       127 ~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~--~---~e-----  195 (452)
T cd05295         127 CITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD--L---DV-----  195 (452)
T ss_pred             EEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC--C---HH-----
Confidence            48999999999999999972   32    4778888  6777777776666532 211 12222 11  1   11     


Q ss_pred             HHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcC
Q 023054           70 FIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSS  138 (288)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS  138 (288)
                         .+...|++|..+|.....    ...-.+.++.|..-    ++...+.+.+....   .-+|+++.|
T Consensus       196 ---a~~daDvvIitag~prk~----G~~R~DLL~~N~~I----fk~~g~~I~~~a~~---~~~VlVv~t  250 (452)
T cd05295         196 ---AFKDAHVIVLLDDFLIKE----GEDLEGCIRSRVAI----CQLYGPLIEKNAKE---DVKVIVAGR  250 (452)
T ss_pred             ---HhCCCCEEEECCCCCCCc----CCCHHHHHHHHHHH----HHHHHHHHHHhCCC---CCeEEEEeC
Confidence               123789999999975331    12344555555544    44444444443200   246666665

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00203 glutamyl-tRNA reductase

Probab=93.80  E-value=0.25  Score=46.05  Aligned_cols=72  Identities=10%  Similarity=0.138  Sum_probs=48.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|+ |++|..+++.|...|+ +|++++|+.++.+.+...+.    +..+.+.  ++   ++....+       ...|+
T Consensus       270 lVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~----g~~i~~~--~~---~dl~~al-------~~aDV  332 (519)
T PLN00203        270 LVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP----DVEIIYK--PL---DEMLACA-------AEADV  332 (519)
T ss_pred             EEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC----CCceEee--cH---hhHHHHH-------hcCCE
Confidence            35666 9999999999999997 79999999988877665541    1222221  22   2222222       25799


Q ss_pred             EEEccccCCC
Q 023054           80 LINNAGIMFC   89 (288)
Q Consensus        80 lv~~ag~~~~   89 (288)
                      ||.+.+...+
T Consensus       333 VIsAT~s~~p  342 (519)
T PLN00203        333 VFTSTSSETP  342 (519)
T ss_pred             EEEccCCCCC
Confidence            9988765433

>PRK07411 hypothetical protein; Validated

Probab=93.69  E-value=0.51  Score=42.43  Aligned_cols=55  Identities=25%  Similarity=0.294  Sum_probs=41.6

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSS   59 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   59 (288)
                      |.||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+...++.
T Consensus        45 G~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~~~  119 (390)
T PRK07411         45 GTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRLSS  119 (390)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecccCH
Confidence            568999999999999997 688876432                   3455666777777777777777766664

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=93.53  E-value=1.6  Score=36.96  Aligned_cols=71  Identities=8%  Similarity=0.021  Sum_probs=47.9

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      |+|+...+++..+.+.| .|+.++.++..++.+.+.+...+- .++.++..|..+..          ...+.+|.|+.++
T Consensus        81 g~G~kt~~la~~~~~~g-~v~a~D~~~~~l~~~~~n~~~~g~-~~v~~~~~D~~~~~----------~~~~~fD~Vl~D~  148 (264)
T TIGR00446        81 APGGKTTQISALMKNEG-AIVANEFSKSRTKVLIANINRCGV-LNVAVTNFDGRVFG----------AAVPKFDAILLDA  148 (264)
T ss_pred             CchHHHHHHHHHcCCCC-EEEEEcCCHHHHHHHHHHHHHcCC-CcEEEecCCHHHhh----------hhccCCCEEEEcC
Confidence            45666666666554444 799999999999988888876532 35777777754321          1124589999887


Q ss_pred             ccC
Q 023054           85 GIM   87 (288)
Q Consensus        85 g~~   87 (288)
                      -..
T Consensus       149 Pcs  151 (264)
T TIGR00446       149 PCS  151 (264)
T ss_pred             CCC
Confidence            544

>PRK14851 hypothetical protein; Provisional

Probab=93.48  E-value=0.55  Score=45.24  Aligned_cols=73  Identities=10%  Similarity=0.190  Sum_probs=50.5

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |.||+|..++..|+..|. ++++++.+.                   .+.+-+.+.+.+.+|..+++.+...++. +.+.
T Consensus        50 G~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~~i~~-~n~~  128 (679)
T PRK14851         50 GMGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPAGINA-DNMD  128 (679)
T ss_pred             CcCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEecCCCh-HHHH
Confidence            478999999999999998 677765421                   3455556667777777888888777763 3444


Q ss_pred             HHHHHHHhcCCCcceEEEccc
Q 023054           65 DFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~ag   85 (288)
                      .+++       ++|+||.+..
T Consensus       129 ~~l~-------~~DvVid~~D  142 (679)
T PRK14851        129 AFLD-------GVDVVLDGLD  142 (679)
T ss_pred             HHHh-------CCCEEEECCC
Confidence            4443       5677775543

>PRK14852 hypothetical protein; Provisional

Probab=93.48  E-value=0.47  Score=47.13  Aligned_cols=72  Identities=14%  Similarity=0.222  Sum_probs=49.5

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |.||+|..++..|+..|. ++.+++-+.                   .+.+...+.+.+.+|..+++.+...++. +.+.
T Consensus       339 GlGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~~I~~-en~~  417 (989)
T PRK14852        339 GLGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEGVAA-ETID  417 (989)
T ss_pred             CCcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEecCCCH-HHHH
Confidence            478999999999999997 677765422                   3455566677777777788887776643 4444


Q ss_pred             HHHHHHHhcCCCcceEEEcc
Q 023054           65 DFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~a   84 (288)
                      ++++       ++|+||.+.
T Consensus       418 ~fl~-------~~DiVVDa~  430 (989)
T PRK14852        418 AFLK-------DVDLLVDGI  430 (989)
T ss_pred             HHhh-------CCCEEEECC
Confidence            4443       467777544

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=93.39  E-value=0.36  Score=41.42  Aligned_cols=26  Identities=27%  Similarity=0.351  Sum_probs=21.9

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARN   30 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~   30 (288)
                      |.||+|..+|+.|+..|. ++++++.+
T Consensus         6 GaGGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           6 GAGTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            568999999999999997 68887643

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=93.31  E-value=0.68  Score=41.69  Aligned_cols=55  Identities=25%  Similarity=0.296  Sum_probs=39.3

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSS   59 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   59 (288)
                      |.||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+...++.
T Consensus        49 G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~~  123 (392)
T PRK07878         49 GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLDP  123 (392)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCCh
Confidence            578999999999999997 688876432                   2455556666667776677666655553

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=93.30  E-value=0.4  Score=41.93  Aligned_cols=73  Identities=14%  Similarity=0.167  Sum_probs=46.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|+ +++|..+++.+...|++ |+++++++++.+.+ .++     +.. .  ..|..+.+ .+.+.+ +.. ..++|+
T Consensus       168 lV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~-~--~i~~~~~~-~~~~~~-~~~-~~~~d~  234 (339)
T cd08239         168 LVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GAD-F--VINSGQDD-VQEIRE-LTS-GAGADV  234 (339)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC-E--EEcCCcch-HHHHHH-HhC-CCCCCE
Confidence            47775 89999999888889998 99999888776543 333     221 1  23444433 333322 211 126999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.+.|.
T Consensus       235 vid~~g~  241 (339)
T cd08239         235 AIECSGN  241 (339)
T ss_pred             EEECCCC
Confidence            9988873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB

Probab=93.26  E-value=0.36  Score=38.67  Aligned_cols=52  Identities=23%  Similarity=0.186  Sum_probs=39.4

Q ss_pred             CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh
Q 023054            6 ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI   60 (288)
Q Consensus         6 s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   60 (288)
                      +.|-|+. +..||++|++|..++.++..++.+.+...+.  +..+....+|+.+.
T Consensus        38 gcG~GRN-alyLA~~G~~VtAvD~s~~al~~l~~~a~~~--~l~i~~~~~Dl~~~   89 (192)
T PF03848_consen   38 GCGEGRN-ALYLASQGFDVTAVDISPVALEKLQRLAEEE--GLDIRTRVADLNDF   89 (192)
T ss_dssp             S-TTSHH-HHHHHHTT-EEEEEESSHHHHHHHHHHHHHT--T-TEEEEE-BGCCB
T ss_pred             CCCCcHH-HHHHHHCCCeEEEEECCHHHHHHHHHHHhhc--CceeEEEEecchhc
Confidence            3567888 8899999999999999999988876665555  46688999999874

When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=93.17  E-value=0.28  Score=34.23  Aligned_cols=37  Identities=32%  Similarity=0.330  Sum_probs=32.0

Q ss_pred             CCChhHHHHHHHHHHCC---CEEEEE-eCChHHHHHHHHHH
Q 023054            5 GASGIGLETARVLALRK---AHVIIA-ARNMAAANEARQLI   41 (288)
Q Consensus         5 as~gIG~~ia~~La~~G---~~V~~~-~r~~~~~~~~~~~~   41 (288)
                      |+|.+|.++++.|++.|   .+|.+. .|++++.++..++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            78999999999999999   899966 99999888776654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=93.03  E-value=0.31  Score=46.07  Aligned_cols=67  Identities=9%  Similarity=0.011  Sum_probs=50.2

Q ss_pred             cCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            4 GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      =|.|.+|+++++.|.++|.+|+++++|+++.++..+        .....+..|.+|++..+++-      ..+.|.++-.
T Consensus       423 ~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~--------~g~~~i~GD~~~~~~L~~a~------i~~a~~viv~  488 (558)
T PRK10669        423 VGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE--------RGIRAVLGNAANEEIMQLAH------LDCARWLLLT  488 (558)
T ss_pred             ECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------CCCeEEEcCCCCHHHHHhcC------ccccCEEEEE
Confidence            367889999999999999999999999987666542        23678899999977666531      1256766644


Q ss_pred             c
Q 023054           84 A   84 (288)
Q Consensus        84 a   84 (288)
                      .
T Consensus       489 ~  489 (558)
T PRK10669        489 I  489 (558)
T ss_pred             c
Confidence            3

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.02  E-value=0.58  Score=40.66  Aligned_cols=73  Identities=23%  Similarity=0.288  Sum_probs=45.5

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      ++||++++|...++.....|++|+.+++++++.+.+.+ +     +.. .++  |..+.+..+.+. ++.. ..++|+++
T Consensus       149 ~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~-----g~~-~~i--~~~~~~~~~~v~-~~~~-~~~~d~vi  217 (324)
T cd08291         149 HTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I-----GAE-YVL--NSSDPDFLEDLK-ELIA-KLNATIFF  217 (324)
T ss_pred             EccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCc-EEE--ECCCccHHHHHH-HHhC-CCCCcEEE
Confidence            35899999999887766789999999998877655432 2     222 222  333333333322 2211 12599999


Q ss_pred             Eccc
Q 023054           82 NNAG   85 (288)
Q Consensus        82 ~~ag   85 (288)
                      .+.|
T Consensus       218 d~~g  221 (324)
T cd08291         218 DAVG  221 (324)
T ss_pred             ECCC
Confidence            8877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=92.99  E-value=1.4  Score=38.07  Aligned_cols=78  Identities=13%  Similarity=0.072  Sum_probs=48.6

Q ss_pred             CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH----------HhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            6 ASGIGLETARVLALRKAHVIIAARNMAAANEARQLI----------LKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         6 s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      .|-+|.++++.|++.|++|++.+|++++.+++.+.-          .......++.++  =+.+. .++.+++++.....
T Consensus         8 lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~--~vp~~-~~~~v~~~l~~~l~   84 (298)
T TIGR00872         8 LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWV--MVPHG-IVDAVLEELAPTLE   84 (298)
T ss_pred             chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEE--EcCch-HHHHHHHHHHhhCC
Confidence            578999999999999999999999998877655421          000001222222  23333 66777777665433


Q ss_pred             CcceEEEcccc
Q 023054           76 PLNILINNAGI   86 (288)
Q Consensus        76 ~id~lv~~ag~   86 (288)
                      +=++||++...
T Consensus        85 ~g~ivid~st~   95 (298)
T TIGR00872        85 KGDIVIDGGNS   95 (298)
T ss_pred             CCCEEEECCCC
Confidence            23566665443

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=92.95  E-value=0.071  Score=35.37  Aligned_cols=31  Identities=23%  Similarity=0.254  Sum_probs=18.7

Q ss_pred             CcccCCChhHHHHHHHHH-HCCCEEEEEeCCh
Q 023054            1 MLAGGASGIGLETARVLA-LRKAHVIIAARNM   31 (288)
Q Consensus         1 lItGas~gIG~~ia~~La-~~G~~V~~~~r~~   31 (288)
                      ||+|+|+|.|.+....++ ..|++.+.++...
T Consensus        43 LViGaStGyGLAsRIa~aFg~gA~TiGV~fEk   74 (78)
T PF12242_consen   43 LVIGASTGYGLASRIAAAFGAGADTIGVSFEK   74 (78)
T ss_dssp             EEES-SSHHHHHHHHHHHHCC--EEEEEE---
T ss_pred             EEEecCCcccHHHHHHHHhcCCCCEEEEeecc
Confidence            699999999999444444 5677777766543

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=92.92  E-value=0.8  Score=39.16  Aligned_cols=99  Identities=16%  Similarity=0.176  Sum_probs=66.4

Q ss_pred             CcccCCChhHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-CCcc
Q 023054            1 MLAGGASGIGLETARVLAL-RKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-LPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id   78 (288)
                      +|++|+|.+|.- |-++|+ +|++|+.+.-.+++.+-+.+++     +..   ...|....+    +.+.+++.. .+||
T Consensus       155 vVSaAaGaVGsv-vgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD---~~idyk~~d----~~~~L~~a~P~GID  221 (340)
T COG2130         155 VVSAAAGAVGSV-VGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFD---AGIDYKAED----FAQALKEACPKGID  221 (340)
T ss_pred             EEEecccccchH-HHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CCc---eeeecCccc----HHHHHHHHCCCCeE
Confidence            589999999976 556665 7999999999988877666655     211   123555542    233333333 4699


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                      +.+-|.|..                        .+.+.++.|..       .+||+.++-++++-
T Consensus       222 vyfeNVGg~------------------------v~DAv~~~ln~-------~aRi~~CG~IS~YN  255 (340)
T COG2130         222 VYFENVGGE------------------------VLDAVLPLLNL-------FARIPVCGAISQYN  255 (340)
T ss_pred             EEEEcCCch------------------------HHHHHHHhhcc-------ccceeeeeehhhcC
Confidence            999999842                        23455666655       47999999888764

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=92.90  E-value=0.31  Score=42.15  Aligned_cols=74  Identities=16%  Similarity=0.221  Sum_probs=47.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||.|+++++|.++++.....|++|+++.++.+..+.+.+ +     +.. .++  +..+.+..+. +.++.. ..++|++
T Consensus       144 lI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~-----g~~-~~~--~~~~~~~~~~-i~~~~~-~~~~d~v  212 (324)
T cd08292         144 IQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L-----GIG-PVV--STEQPGWQDK-VREAAG-GAPISVA  212 (324)
T ss_pred             EEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c-----CCC-EEE--cCCCchHHHH-HHHHhC-CCCCcEE
Confidence            578999999999999888899999999888776554432 2     221 222  3333222222 222211 1259999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       213 ~d~~g  217 (324)
T cd08292         213 LDSVG  217 (324)
T ss_pred             EECCC
Confidence            98877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=92.84  E-value=0.67  Score=41.24  Aligned_cols=74  Identities=20%  Similarity=0.192  Sum_probs=46.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC-hHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id   78 (288)
                      ||+|+ ++||...++.+...|+ +|+.+++++++.+.+. ++     +.. .  ..|..+ ...+.+.+.++..  +++|
T Consensus       190 lV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~-----Ga~-~--~i~~~~~~~~~~~~v~~~~~--~g~d  257 (368)
T TIGR02818       190 AVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KL-----GAT-D--CVNPNDYDKPIQEVIVEITD--GGVD  257 (368)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCC-e--EEcccccchhHHHHHHHHhC--CCCC
Confidence            57875 8999998887777898 7999999888766543 22     222 1  224332 1223333333322  3699


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.++|.
T Consensus       258 ~vid~~G~  265 (368)
T TIGR02818       258 YSFECIGN  265 (368)
T ss_pred             EEEECCCC
Confidence            99999883

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=92.80  E-value=3  Score=32.87  Aligned_cols=61  Identities=16%  Similarity=0.116  Sum_probs=43.6

Q ss_pred             HHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccccC
Q 023054           13 TARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIM   87 (288)
Q Consensus        13 ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   87 (288)
                      ++..+++.|.+|+.++.+++..+.+.+.+...  +.++.++.+|+.+..            .+..|+++.|.-+.
T Consensus        33 ~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~------------~~~fD~Vi~n~p~~   93 (179)
T TIGR00537        33 VAIRLKGKGKCILTTDINPFAVKELRENAKLN--NVGLDVVMTDLFKGV------------RGKFDVILFNPPYL   93 (179)
T ss_pred             HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc--CCceEEEEccccccc------------CCcccEEEECCCCC
Confidence            35566667779999999999888777776544  345788888876421            13689999987654

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=92.78  E-value=0.77  Score=39.79  Aligned_cols=37  Identities=24%  Similarity=0.358  Sum_probs=31.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|.|+++++|.++++.+...|++++++.+++++.+.+
T Consensus       145 lI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        145 LIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            5889999999999999999999988888887765554

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=92.74  E-value=0.46  Score=40.98  Aligned_cols=35  Identities=29%  Similarity=0.333  Sum_probs=29.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANE   36 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~   36 (288)
                      +|.|. |++|+.++..|.+.|++|++++|+.+..+.
T Consensus       156 lViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~  190 (296)
T PRK08306        156 LVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR  190 (296)
T ss_pred             EEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            35675 789999999999999999999999765433

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.71  E-value=0.62  Score=40.11  Aligned_cols=70  Identities=14%  Similarity=0.128  Sum_probs=46.6

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCC-ChHHHHHHHHHHHhcCCCcceE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS-SIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |+|+.| +|.--++.--+.|++|+++++...+.+++.+.+     ++...   +|.+ |.+.++++.+..   .+.+|.+
T Consensus       187 I~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-----GAd~f---v~~~~d~d~~~~~~~~~---dg~~~~v  254 (360)
T KOG0023|consen  187 IVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-----GADVF---VDSTEDPDIMKAIMKTT---DGGIDTV  254 (360)
T ss_pred             EecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-----Cccee---EEecCCHHHHHHHHHhh---cCcceee
Confidence            677776 997655555567999999999988878777766     33322   3666 777777776643   2334444


Q ss_pred             EEc
Q 023054           81 INN   83 (288)
Q Consensus        81 v~~   83 (288)
                      ++.
T Consensus       255 ~~~  257 (360)
T KOG0023|consen  255 SNL  257 (360)
T ss_pred             eec
Confidence            443

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=92.68  E-value=0.65  Score=42.02  Aligned_cols=84  Identities=13%  Similarity=0.170  Sum_probs=46.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKA---HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      +|.|++|+||...++.+-..|+   +|+++++++++++.+.+................|..+.++..+.+.++.. ..++
T Consensus       180 lV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~-g~g~  258 (410)
T cd08238         180 AILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG-GQGF  258 (410)
T ss_pred             EEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC-CCCC
Confidence            5789999999997776555554   79999999988775544221000000111122344332223332333221 2258


Q ss_pred             ceEEEccc
Q 023054           78 NILINNAG   85 (288)
Q Consensus        78 d~lv~~ag   85 (288)
                      |.+|.+.|
T Consensus       259 D~vid~~g  266 (410)
T cd08238         259 DDVFVFVP  266 (410)
T ss_pred             CEEEEcCC
Confidence            99998776

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=92.65  E-value=0.61  Score=40.48  Aligned_cols=73  Identities=12%  Similarity=0.205  Sum_probs=46.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|+++++|.++++.....|++|+.+.+++++.+.+ ..+     +.. .+  .|..+.+ ....+....  ..++|.+
T Consensus       144 lI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~v--~~~~~~~-~~~~~~~~~--~~~vd~v  211 (329)
T cd08250         144 LVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL-----GCD-RP--INYKTED-LGEVLKKEY--PKGVDVV  211 (329)
T ss_pred             EEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc-----CCc-eE--EeCCCcc-HHHHHHHhc--CCCCeEE
Confidence            5889999999998888888999999999887765543 222     221 12  2333222 222222222  2368999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +++.|
T Consensus       212 ~~~~g  216 (329)
T cd08250         212 YESVG  216 (329)
T ss_pred             EECCc
Confidence            98776

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=92.62  E-value=0.44  Score=41.29  Aligned_cols=37  Identities=22%  Similarity=0.333  Sum_probs=31.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|.|+++++|.++++.....|++|+++++++++.+.+
T Consensus       151 lI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         151 LVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             EEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            5889999999999888888999999999988775544

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=92.60  E-value=0.49  Score=44.83  Aligned_cols=53  Identities=19%  Similarity=0.213  Sum_probs=37.6

Q ss_pred             cCCChhHHHHHHHHHHCCC-EEEEEeCCh----------------------HHHHHHHHHHHhhCCCCceEEEEec
Q 023054            4 GGASGIGLETARVLALRKA-HVIIAARNM----------------------AAANEARQLILKEDDTARVDTLKLD   56 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~-~V~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~D   56 (288)
                      -|.||+|..+++.|+..|. ++++++.+.                      .+.+.+.+.+.+.+|..++..+...
T Consensus       344 vGaGGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~~~~~~  419 (664)
T TIGR01381       344 LGAGTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQATGHRLT  419 (664)
T ss_pred             ECCcHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEEEeeee
Confidence            4679999999999999997 688876421                      2344455666666777666666655

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=92.59  E-value=0.65  Score=39.89  Aligned_cols=37  Identities=24%  Similarity=0.352  Sum_probs=31.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|.|+++++|.++++..-..|++|+.+.+++++.+.+
T Consensus       147 lV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         147 LIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             EEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            5889999999999888888999999999887665443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=92.43  E-value=1.2  Score=40.70  Aligned_cols=74  Identities=9%  Similarity=0.112  Sum_probs=49.1

Q ss_pred             cCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            4 GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      -|+||...+++..+.. ..+|+.++.++..++.+.+.+...+ -.++.++..|..+.....      ....+.+|.|+.+
T Consensus       261 ag~G~kt~~la~~~~~-~g~v~a~D~~~~rl~~~~~n~~r~g-~~~v~~~~~D~~~~~~~~------~~~~~~fD~Vl~D  332 (434)
T PRK14901        261 AAPGGKTTHIAELMGD-QGEIWAVDRSASRLKKLQENAQRLG-LKSIKILAADSRNLLELK------PQWRGYFDRILLD  332 (434)
T ss_pred             CCCchhHHHHHHHhCC-CceEEEEcCCHHHHHHHHHHHHHcC-CCeEEEEeCChhhccccc------ccccccCCEEEEe
Confidence            3567777777765433 3489999999999998888887653 235888888876532110      0012368999987


Q ss_pred             cc
Q 023054           84 AG   85 (288)
Q Consensus        84 ag   85 (288)
                      +-
T Consensus       333 aP  334 (434)
T PRK14901        333 AP  334 (434)
T ss_pred             CC
Confidence            64

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=92.29  E-value=1  Score=40.86  Aligned_cols=54  Identities=17%  Similarity=0.255  Sum_probs=37.2

Q ss_pred             CCChhHHHHHHHHHHCCC------EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCC
Q 023054            5 GASGIGLETARVLALRKA------HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLS   58 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~   58 (288)
                      |.||||.++++.|+..|.      ++.+++.+.                   .+.+.+.+.+.+.+|..++..+...+.
T Consensus         6 GaGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~~~~v~   84 (435)
T cd01490           6 GAGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITALQNRVG   84 (435)
T ss_pred             CCCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            478999999999999998      788886542                   233444455555566666666655554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=92.29  E-value=0.34  Score=41.40  Aligned_cols=62  Identities=16%  Similarity=0.172  Sum_probs=46.7

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      ||+-+|++++.++-+.|..|+.++|-...-.-  +        .....+..|+.|.+.++++++..     ++|++|
T Consensus        19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAm--q--------VAhrs~Vi~MlD~~al~avv~re-----kPd~IV   80 (394)
T COG0027          19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAM--Q--------VAHRSYVIDMLDGDALRAVVERE-----KPDYIV   80 (394)
T ss_pred             cCCccchHHHHHHHhcCCEEEEecCcCCChhh--h--------hhhheeeeeccCHHHHHHHHHhh-----CCCeee
Confidence            68899999999999999999999996533211  1        11334567999999999998875     556655

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=92.28  E-value=0.76  Score=39.63  Aligned_cols=74  Identities=14%  Similarity=0.149  Sum_probs=46.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||.|+++++|.++++.+-..|++|+++.++.++.+.+ .++     +.. .+  .|..+......+. +... ..++|.+
T Consensus       143 lI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~--~~~~~~~~~~~~~-~~~~-~~~~d~v  211 (323)
T cd05282         143 IQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL-----GAD-EV--IDSSPEDLAQRVK-EATG-GAGARLA  211 (323)
T ss_pred             EEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc-----CCC-EE--ecccchhHHHHHH-HHhc-CCCceEE
Confidence            5789999999999998889999999998887765443 222     221 11  2333322223222 2211 2358999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       212 l~~~g  216 (323)
T cd05282         212 LDAVG  216 (323)
T ss_pred             EECCC
Confidence            98876

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02740 Alcohol dehydrogenase-like

Probab=92.12  E-value=0.75  Score=41.12  Aligned_cols=74  Identities=15%  Similarity=0.152  Sum_probs=46.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChH-HHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA-SIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id   78 (288)
                      ||.|+ ++||...++.+-..|+ +|+++++++++++.+. ++     +.. .++  |..+.+ .+.+.+.++..  +.+|
T Consensus       203 lV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~-----Ga~-~~i--~~~~~~~~~~~~v~~~~~--~g~d  270 (381)
T PLN02740        203 AIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM-----GIT-DFI--NPKDSDKPVHERIREMTG--GGVD  270 (381)
T ss_pred             EEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc-----CCc-EEE--ecccccchHHHHHHHHhC--CCCC
Confidence            47775 9999998888888898 6999999888766543 22     222 222  443321 23333333322  2699


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.+.|.
T Consensus       271 vvid~~G~  278 (381)
T PLN02740        271 YSFECAGN  278 (381)
T ss_pred             EEEECCCC
Confidence            99999884

>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis]

Probab=92.05  E-value=2  Score=33.96  Aligned_cols=74  Identities=16%  Similarity=0.126  Sum_probs=50.4

Q ss_pred             ccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEE
Q 023054            3 AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILIN   82 (288)
Q Consensus         3 tGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~   82 (288)
                      .|+++|+=..........+.....++-|+..++-+.+..+..  +.++..+.+|+.+  .       +..  +++|+|+.
T Consensus        50 IG~GSGvvstfL~~~i~~~~~~latDiNp~A~~~Tl~TA~~n--~~~~~~V~tdl~~--~-------l~~--~~VDvLvf  116 (209)
T KOG3191|consen   50 IGCGSGVVSTFLASVIGPQALYLATDINPEALEATLETARCN--RVHIDVVRTDLLS--G-------LRN--ESVDVLVF  116 (209)
T ss_pred             ecCCcchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhc--CCccceeehhHHh--h-------hcc--CCccEEEE
Confidence            467777666555555444455667788998888777665543  5668888888764  1       211  58999999


Q ss_pred             ccccCCC
Q 023054           83 NAGIMFC   89 (288)
Q Consensus        83 ~ag~~~~   89 (288)
                      |..+...
T Consensus       117 NPPYVpt  123 (209)
T KOG3191|consen  117 NPPYVPT  123 (209)
T ss_pred             CCCcCcC
Confidence            9998754

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=92.01  E-value=0.82  Score=41.11  Aligned_cols=66  Identities=18%  Similarity=0.241  Sum_probs=47.7

Q ss_pred             CCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            5 GASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         5 as~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      |.|-+|.-+|++|+++| .+|+++.|+.++++++.+++.            .+....+.+...+       ...|+||.+
T Consensus       185 GAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~------------~~~~~l~el~~~l-------~~~DvViss  245 (414)
T COG0373         185 GAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG------------AEAVALEELLEAL-------AEADVVISS  245 (414)
T ss_pred             cccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC------------CeeecHHHHHHhh-------hhCCEEEEe
Confidence            35678999999999999 579999999999998888762            1222333333333       367999998


Q ss_pred             cccCCC
Q 023054           84 AGIMFC   89 (288)
Q Consensus        84 ag~~~~   89 (288)
                      .|...+
T Consensus       246 Tsa~~~  251 (414)
T COG0373         246 TSAPHP  251 (414)
T ss_pred             cCCCcc
Confidence            886543

>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A

Probab=91.95  E-value=1.1  Score=31.51  Aligned_cols=68  Identities=12%  Similarity=0.116  Sum_probs=46.5

Q ss_pred             CCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEE
Q 023054            5 GASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILIN   82 (288)
Q Consensus         5 as~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~   82 (288)
                      |+|...+.+++.+ ..|  .+++.++.+++.++...+.....+  .++.+++.|+.+..          ...++.|+|+.
T Consensus         7 G~G~~~~~l~~~~-~~~~~~~~~gvD~s~~~l~~~~~~~~~~~--~~~~~~~~D~~~l~----------~~~~~~D~v~~   73 (101)
T PF13649_consen    7 GTGRVTRALARRF-DAGPSSRVIGVDISPEMLELAKKRFSEDG--PKVRFVQADARDLP----------FSDGKFDLVVC   73 (101)
T ss_dssp             TTSHHHHHHHHHS------SEEEEEES-HHHHHHHHHHSHHTT--TTSEEEESCTTCHH----------HHSSSEEEEEE
T ss_pred             CCcHHHHHHHHHh-hhcccceEEEEECCHHHHHHHHHhchhcC--CceEEEECCHhHCc----------ccCCCeeEEEE
Confidence            4455566666666 556  789999999999888777766653  47899999998842          12358999998


Q ss_pred             ccc
Q 023054           83 NAG   85 (288)
Q Consensus        83 ~ag   85 (288)
                      +..
T Consensus        74 ~~~   76 (101)
T PF13649_consen   74 SGL   76 (101)
T ss_dssp             -TT
T ss_pred             cCC
Confidence            655

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=91.88  E-value=0.91  Score=40.34  Aligned_cols=74  Identities=15%  Similarity=0.091  Sum_probs=47.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-HHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-ASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id   78 (288)
                      ||.|+ ++||...++.+-..|+ +|+.+++++++.+.+ .++     +.. .+  .|..+. +++.+.+.++..  +++|
T Consensus       191 lV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~-~~--i~~~~~~~~~~~~v~~~~~--~g~d  258 (368)
T cd08300         191 AVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GAT-DC--VNPKDHDKPIQQVLVEMTD--GGVD  258 (368)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCC-EE--EcccccchHHHHHHHHHhC--CCCc
Confidence            57774 8999999888888999 699999998876644 222     222 12  344432 234443444332  3699


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      +++.+.|.
T Consensus       259 ~vid~~g~  266 (368)
T cd08300         259 YTFECIGN  266 (368)
T ss_pred             EEEECCCC
Confidence            99998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=91.86  E-value=0.82  Score=39.93  Aligned_cols=74  Identities=12%  Similarity=0.072  Sum_probs=47.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||.|+++++|.++++.+-..|++|+++.+++++.+.+ +.+     +.. .  ..+..+.+...++.+..  ...++|.+
T Consensus       170 lV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~--v~~~~~~~~~~~~~~~~--~~~~vd~v  238 (341)
T cd08297         170 VISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL-----GAD-A--FVDFKKSDDVEAVKELT--GGGGAHAV  238 (341)
T ss_pred             EEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCc-E--EEcCCCccHHHHHHHHh--cCCCCCEE
Confidence            5789999999999999889999999999998765543 332     221 1  12333333333332221  12369999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +++.+
T Consensus       239 l~~~~  243 (341)
T cd08297         239 VVTAV  243 (341)
T ss_pred             EEcCC
Confidence            98665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=91.86  E-value=0.71  Score=39.54  Aligned_cols=37  Identities=30%  Similarity=0.382  Sum_probs=31.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|+|+++++|.+++..+...|+.|+.++++.++.+.+
T Consensus       144 li~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         144 LVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             EEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            5789999999999999999999999999887665543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=91.84  E-value=0.86  Score=38.90  Aligned_cols=37  Identities=24%  Similarity=0.219  Sum_probs=31.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus       141 lI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         141 LVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            5789999999999988888999999998887765543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional

Probab=91.75  E-value=9.7  Score=34.37  Aligned_cols=63  Identities=10%  Similarity=0.160  Sum_probs=42.8

Q ss_pred             HCCC-EEEEEeCChHHHHHHHHHHHhhCCC-CceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccccC
Q 023054           19 LRKA-HVIIAARNMAAANEARQLILKEDDT-ARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIM   87 (288)
Q Consensus        19 ~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   87 (288)
                      ..|+ +|+.++.++..++.+.+.+...+-. .++.++..|+.+      +...+.......|+||.++-..
T Consensus       240 ~~ga~~V~~VD~s~~al~~a~~N~~~Ngl~~~~v~~i~~D~~~------~l~~~~~~~~~fDlVilDPP~f  304 (396)
T PRK15128        240 MGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFK------LLRTYRDRGEKFDVIVMDPPKF  304 (396)
T ss_pred             hCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCcEEEEEccHHH------HHHHHHhcCCCCCEEEECCCCC
Confidence            3455 8999999999988877777654322 368888888753      2223332334799999887654

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=91.69  E-value=2.5  Score=38.78  Aligned_cols=73  Identities=12%  Similarity=0.136  Sum_probs=50.3

Q ss_pred             ccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEE
Q 023054            3 AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILIN   82 (288)
Q Consensus         3 tGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~   82 (288)
                      ..|+|+...++++.+.. +.+|+.++.++...+.+.+.+...+ -.++.++..|..+...      .+   .+.+|.|+.
T Consensus       258 gaG~G~~t~~la~~~~~-~~~v~avDi~~~~l~~~~~n~~~~g-~~~v~~~~~D~~~~~~------~~---~~~fD~Vl~  326 (444)
T PRK14902        258 CAAPGGKTTHIAELLKN-TGKVVALDIHEHKLKLIEENAKRLG-LTNIETKALDARKVHE------KF---AEKFDKILV  326 (444)
T ss_pred             CCCCCHHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcC-CCeEEEEeCCcccccc------hh---cccCCEEEE
Confidence            34677888887776532 3589999999999888877776543 2348888888876321      11   136899998


Q ss_pred             cccc
Q 023054           83 NAGI   86 (288)
Q Consensus        83 ~ag~   86 (288)
                      ++..
T Consensus       327 D~Pc  330 (444)
T PRK14902        327 DAPC  330 (444)
T ss_pred             cCCC
Confidence            8753

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=91.61  E-value=0.34  Score=43.30  Aligned_cols=32  Identities=22%  Similarity=0.309  Sum_probs=27.7

Q ss_pred             cccCCChhHHHHHHHHHHC-CCEEEEEeCChHH
Q 023054            2 LAGGASGIGLETARVLALR-KAHVIIAARNMAA   33 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~   33 (288)
                      |.||||.+|.++++.|.++ ..+|..+.++...
T Consensus        43 IvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa   75 (381)
T PLN02968         43 VLGASGYTGAEVRRLLANHPDFEITVMTADRKA   75 (381)
T ss_pred             EECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence            7899999999999999999 5688888876544

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=91.55  E-value=0.56  Score=43.03  Aligned_cols=68  Identities=18%  Similarity=0.165  Sum_probs=45.0

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      +||-.|+++|+.++.+|++|+++.-...        +  . ++..+.++.  +.   +..++.+.+.+... .|++|++|
T Consensus       280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~--~-~p~~v~~i~--V~---ta~eM~~av~~~~~-~Di~I~aA  342 (475)
T PRK13982        280 SSGKQGFAIAAAAAAAGAEVTLISGPVD--------L--A-DPQGVKVIH--VE---SARQMLAAVEAALP-ADIAIFAA  342 (475)
T ss_pred             CchHHHHHHHHHHHHCCCcEEEEeCCcC--------C--C-CCCCceEEE--ec---CHHHHHHHHHhhCC-CCEEEEec
Confidence            3788999999999999999999874321        0  0 133455553  33   34444444444443 69999999


Q ss_pred             ccCCC
Q 023054           85 GIMFC   89 (288)
Q Consensus        85 g~~~~   89 (288)
                      .+...
T Consensus       343 AVaDy  347 (475)
T PRK13982        343 AVADW  347 (475)
T ss_pred             cccce
Confidence            98643

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=91.50  E-value=0.33  Score=38.08  Aligned_cols=31  Identities=23%  Similarity=0.313  Sum_probs=23.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM   31 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~   31 (288)
                      +|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        48 lViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          48 VVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             EEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            4677755568888888888888888888764

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=91.43  E-value=0.5  Score=40.56  Aligned_cols=40  Identities=23%  Similarity=0.256  Sum_probs=33.8

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLIL   42 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~   42 (288)
                      |.|+ |-+|..+|..|+..|+.|++.+++++.++...+.+.
T Consensus        10 ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~   49 (286)
T PRK07819         10 VVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIE   49 (286)
T ss_pred             EEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHH
Confidence            3454 789999999999999999999999998887666554

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=91.23  E-value=1.1  Score=41.37  Aligned_cols=69  Identities=13%  Similarity=0.057  Sum_probs=43.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |.| .|++|.++|+.|.++|++|++++++.. ......+.+.+.  +  +.++..+-..             .....|.|
T Consensus        21 viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~--g--v~~~~~~~~~-------------~~~~~D~V   82 (480)
T PRK01438         21 VAG-LGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL--G--ATVRLGPGPT-------------LPEDTDLV   82 (480)
T ss_pred             EEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc--C--CEEEECCCcc-------------ccCCCCEE
Confidence            455 488999999999999999999986543 333334445433  2  3333222111             01257999


Q ss_pred             EEccccCC
Q 023054           81 INNAGIMF   88 (288)
Q Consensus        81 v~~ag~~~   88 (288)
                      |...|+..
T Consensus        83 v~s~Gi~~   90 (480)
T PRK01438         83 VTSPGWRP   90 (480)
T ss_pred             EECCCcCC
Confidence            99999754

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=91.20  E-value=1.4  Score=39.54  Aligned_cols=37  Identities=14%  Similarity=0.223  Sum_probs=31.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|+|+++++|.+++..+-..|++++++.++.++.+.+
T Consensus       198 lV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         198 LIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             EEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            5889999999999888888999988888887776544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=91.18  E-value=1.1  Score=40.18  Aligned_cols=37  Identities=14%  Similarity=0.217  Sum_probs=30.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|+|+++++|.+++..+...|++++++.++.++.+.+
T Consensus       194 lV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       194 LIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             EEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            5899999999999888888999988888877655433

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=91.18  E-value=1.4  Score=38.75  Aligned_cols=36  Identities=14%  Similarity=0.148  Sum_probs=30.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|.|+ ++||..+++.+...|++|+++++++++.+.+
T Consensus       171 lV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       171 IVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            57888 9999998888888999999999998876644

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=91.09  E-value=1.4  Score=37.44  Aligned_cols=250  Identities=12%  Similarity=0.047  Sum_probs=126.0

Q ss_pred             CcccCCChhHHHHHHHHHH-CCCEEEEEe-------CChH---HH--HHHHHHHHhhCCCCceEEEEecCCChHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLAL-RKAHVIIAA-------RNMA---AA--NEARQLILKEDDTARVDTLKLDLSSIASIKDFA   67 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~-~G~~V~~~~-------r~~~---~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   67 (288)
                      ||.|||+|-|.+.-...+= -|++-+.+.       +++.   ..  ..+.+...++  +--..-+..|.-+.+--+.++
T Consensus        45 LviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k--GlyAksingDaFS~e~k~kvI  122 (398)
T COG3007          45 LVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK--GLYAKSINGDAFSDEMKQKVI  122 (398)
T ss_pred             EEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc--CceeeecccchhhHHHHHHHH
Confidence            6899999999884333321 344433321       1111   11  1111112222  344566778888888888899


Q ss_pred             HHHHhcCCCcceEEEccccCCCCC-----------------------CC-------------CCCcchhhhhhhhhHHHH
Q 023054           68 QNFIALNLPLNILINNAGIMFCPY-----------------------QI-------------SEDGIEMQFATNHIGHFL  111 (288)
Q Consensus        68 ~~~~~~~~~id~lv~~ag~~~~~~-----------------------~~-------------~~~~~~~~~~~n~~~~~~  111 (288)
                      +.+++.+|++|.+|..-+......                       +.             +.+++..+..|.=---|.
T Consensus       123 e~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGeDWq  202 (398)
T COG3007         123 EAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGEDWQ  202 (398)
T ss_pred             HHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcchHH
Confidence            999999999999998754321100                       00             111222222221111111


Q ss_pred             -HHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCc
Q 023054          112 -LTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVN  190 (288)
Q Consensus       112 -l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~  190 (288)
                       .+.+++..-.-+.     +.+-+-.|-+..-..       .      ..--...-|.+|.=++.-+..+...++..+-.
T Consensus       203 ~WidaLl~advlae-----g~kTiAfsYiG~~iT-------~------~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~  264 (398)
T COG3007         203 MWIDALLEADVLAE-----GAKTIAFSYIGEKIT-------H------PIYWDGTIGRAKKDLDQKSLAINEKLAALGGG  264 (398)
T ss_pred             HHHHHHHhcccccc-----CceEEEEEecCCccc-------c------ceeeccccchhhhcHHHHHHHHHHHHHhcCCC
Confidence             2222222111111     233343333322111       0      01122456889999999999999999887633


Q ss_pred             eEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCce--eeccCccCCCCccccC
Q 023054          191 ITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGK--YFLDCNEMPPSALARD  265 (288)
Q Consensus       191 i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~--~~~~~~~~~~~~~~~~  265 (288)
                      -+|. |+- .+-|......+   .....+-+... -..+-|-+.+.+-.|.++..-+   |+  -+.+.+..+.+++...
T Consensus       265 A~vs-VlK-avVTqASsaIP~~plYla~lfkvMK-ekg~HEgcIeQi~rlfse~ly~---g~~~~~D~e~rlR~Dd~El~  338 (398)
T COG3007         265 ARVS-VLK-AVVTQASSAIPMMPLYLAILFKVMK-EKGTHEGCIEQIDRLFSEKLYS---GSKIQLDDEGRLRMDDWELR  338 (398)
T ss_pred             eeee-ehH-HHHhhhhhccccccHHHHHHHHHHH-HcCcchhHHHHHHHHHHHHhhC---CCCCCcCcccccccchhhcC
Confidence            3332 222 23343333222   22111111111 1146678888888888732111   44  2346677888888888


Q ss_pred             HHHH---HHHHHHH
Q 023054          266 ETLA---KKLWDFS  276 (288)
Q Consensus       266 ~~~~---~~~~~~~  276 (288)
                      +++|   +++|+++
T Consensus       339 ~dvQ~~v~~lw~qv  352 (398)
T COG3007         339 PDVQDQVRELWDQV  352 (398)
T ss_pred             HHHHHHHHHHHHhc
Confidence            8888   4677754

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=91.09  E-value=0.39  Score=41.20  Aligned_cols=34  Identities=26%  Similarity=0.333  Sum_probs=28.9

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANE   36 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~   36 (288)
                      |.|. |++|+++++.|...|++|++++|+.+..+.
T Consensus       156 IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       156 VLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             EEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4555 779999999999999999999999876544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=91.09  E-value=0.43  Score=39.96  Aligned_cols=40  Identities=25%  Similarity=0.282  Sum_probs=33.6

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI   41 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~   41 (288)
                      |.|++|-||+++|+.|+.++....++.|+.+...+-....
T Consensus       172 ivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~  211 (351)
T COG5322         172 IVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTL  211 (351)
T ss_pred             EecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhh
Confidence            7899999999999999999999999999877655444333

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=91.01  E-value=1.7  Score=37.20  Aligned_cols=34  Identities=24%  Similarity=0.075  Sum_probs=29.7

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      |.|-+|.++++.|++.|++|++++|++++.+.+.
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~   36 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAV   36 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            5678999999999999999999999988766544

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=90.98  E-value=1.2  Score=38.82  Aligned_cols=37  Identities=22%  Similarity=0.376  Sum_probs=32.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|.|+++.+|.++++.+...|++|+.++++.++.+.+
T Consensus       167 lI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        167 LVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             EEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            5889999999999999989999999999988776554

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=90.91  E-value=0.53  Score=40.81  Aligned_cols=37  Identities=32%  Similarity=0.206  Sum_probs=31.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQ   39 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~   39 (288)
                      |.| .|-+|.+++..|+++|++|++++++++..+....
T Consensus         7 VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~   43 (308)
T PRK06129          7 IIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPA   43 (308)
T ss_pred             EEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHH
Confidence            566 7789999999999999999999999887666544

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=90.86  E-value=0.48  Score=40.33  Aligned_cols=37  Identities=24%  Similarity=0.246  Sum_probs=31.6

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNMAAANEARQLI   41 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~   41 (288)
                      |+||-+++++..|++.|+ +|++++|+.++.+++.+.+
T Consensus       129 GaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        129 GSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            469999999999999998 5999999998887766543

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=90.80  E-value=1.2  Score=39.61  Aligned_cols=73  Identities=15%  Similarity=0.186  Sum_probs=45.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+| +++||..++..+-..|+ +|+++++++++.+.+ .++     +.. .  ..|..+.+..+.+ .++.  .+++|+
T Consensus       196 lV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~-~--~i~~~~~~~~~~i-~~~~--~~g~d~  262 (371)
T cd08281         196 AVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GAT-A--TVNAGDPNAVEQV-RELT--GGGVDY  262 (371)
T ss_pred             EEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCc-e--EeCCCchhHHHHH-HHHh--CCCCCE
Confidence            4677 48999998887777899 699999888876543 222     221 1  2344443333332 2221  236999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.+.|.
T Consensus       263 vid~~G~  269 (371)
T cd08281         263 AFEMAGS  269 (371)
T ss_pred             EEECCCC
Confidence            9998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=90.74  E-value=3.1  Score=35.92  Aligned_cols=82  Identities=16%  Similarity=0.101  Sum_probs=48.3

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH-------HhhCCC-CceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLI-------LKEDDT-ARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |.|-+|.++++.|++.|++|++.+|++++.+.+.+.-       ...... ....++..=+.+.+.++.+++.+.....+
T Consensus         7 GlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~~i~~~l~~   86 (299)
T PRK12490          7 GLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIKDLYPLLSP   86 (299)
T ss_pred             cccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHHHHhccCCC
Confidence            4678999999999999999999999988766543210       000000 00122323344445666666665543322


Q ss_pred             cceEEEcccc
Q 023054           77 LNILINNAGI   86 (288)
Q Consensus        77 id~lv~~ag~   86 (288)
                      =.++|++...
T Consensus        87 g~ivid~st~   96 (299)
T PRK12490         87 GDIVVDGGNS   96 (299)
T ss_pred             CCEEEECCCC
Confidence            2456666544

>cd08230 glucose_DH Glucose dehydrogenase

Probab=90.69  E-value=1  Score=39.82  Aligned_cols=68  Identities=24%  Similarity=0.341  Sum_probs=42.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN---MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      +|+|+ |+||...++.+-..|++|++++|+   +++.+ ..+++     +..  .  +|..+.+ +.+    . ...+.+
T Consensus       177 lI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~-----Ga~--~--v~~~~~~-~~~----~-~~~~~~  239 (355)
T cd08230         177 LVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL-----GAT--Y--VNSSKTP-VAE----V-KLVGEF  239 (355)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc-----CCE--E--ecCCccc-hhh----h-hhcCCC
Confidence            57775 999999988777789999999983   44433 22222     232  2  2433322 221    1 112468


Q ss_pred             ceEEEccc
Q 023054           78 NILINNAG   85 (288)
Q Consensus        78 d~lv~~ag   85 (288)
                      |++|.++|
T Consensus       240 d~vid~~g  247 (355)
T cd08230         240 DLIIEATG  247 (355)
T ss_pred             CEEEECcC
Confidence            99999987

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=90.67  E-value=1.5  Score=39.00  Aligned_cols=73  Identities=14%  Similarity=0.184  Sum_probs=45.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-HHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-ASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id   78 (288)
                      ||.|+ ++||...++.+-..|+ +|+++++++++.+.+ +++     +.. .++  |..+. +++.+.+.++..  +.+|
T Consensus       192 lV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~-~~i--~~~~~~~~~~~~v~~~~~--~~~d  259 (369)
T cd08301         192 AIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVT-EFV--NPKDHDKPVQEVIAEMTG--GGVD  259 (369)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eEE--cccccchhHHHHHHHHhC--CCCC
Confidence            46775 8999998887778898 799999988776543 222     221 122  33321 233333333332  2699


Q ss_pred             eEEEccc
Q 023054           79 ILINNAG   85 (288)
Q Consensus        79 ~lv~~ag   85 (288)
                      +++.+.|
T Consensus       260 ~vid~~G  266 (369)
T cd08301         260 YSFECTG  266 (369)
T ss_pred             EEEECCC
Confidence            9998887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=90.61  E-value=1.7  Score=38.31  Aligned_cols=36  Identities=25%  Similarity=0.290  Sum_probs=29.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~   37 (288)
                      ||+| ++++|.++++.+...|+ +|+++++++++.+.+
T Consensus       182 lI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~  218 (361)
T cd08231         182 VVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA  218 (361)
T ss_pred             EEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4676 59999999988888899 899998887765433

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=90.58  E-value=3.9  Score=36.83  Aligned_cols=109  Identities=22%  Similarity=0.241  Sum_probs=57.8

Q ss_pred             cCCChhHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEE
Q 023054            4 GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILIN   82 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~   82 (288)
                      +|+++||..++..+...|+++++ +++++++++.+.+ +     +..    ..|.....+..+.+.++.. ...+|++|.
T Consensus       192 ~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~-~-----Ga~----~v~~~~~~~~~~~v~~~~~-~~g~Dvvid  260 (393)
T TIGR02819       192 AGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARS-F-----GCE----TVDLSKDATLPEQIEQILG-EPEVDCAVD  260 (393)
T ss_pred             ECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHH-c-----CCe----EEecCCcccHHHHHHHHcC-CCCCcEEEE
Confidence            56799999988877788997554 4566655544332 2     332    1333322222222222221 135899999


Q ss_pred             ccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCc
Q 023054           83 NAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSI  139 (288)
Q Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  139 (288)
                      +.|......  ..+...       ...-..++..+..++.       +|+|++++..
T Consensus       261 ~~G~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~-------~G~i~~~G~~  301 (393)
T TIGR02819       261 CVGFEARGH--GHDGKK-------EAPATVLNSLMEVTRV-------GGAIGIPGLY  301 (393)
T ss_pred             CCCCccccc--cccccc-------cchHHHHHHHHHHhhC-------CCEEEEeeec
Confidence            999642110  001100       1222233444455544       6899998874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=90.57  E-value=1.4  Score=38.54  Aligned_cols=70  Identities=19%  Similarity=0.330  Sum_probs=43.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+++++|.++++.....|++|+.+.++. + .+...++     +.. .  ..|..+.+....+.    . .+.+|.+
T Consensus       167 lI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~-~-~~~~~~~-----g~~-~--~~~~~~~~~~~~l~----~-~~~vd~v  231 (350)
T cd08248         167 LILGGSGGVGTFAIQLLKAWGAHVTTTCSTD-A-IPLVKSL-----GAD-D--VIDYNNEDFEEELT----E-RGKFDVI  231 (350)
T ss_pred             EEECCCChHHHHHHHHHHHCCCeEEEEeCcc-h-HHHHHHh-----CCc-e--EEECCChhHHHHHH----h-cCCCCEE
Confidence            5889999999999988888999988887652 2 2222222     221 1  23444433333322    2 2469999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       232 i~~~g  236 (350)
T cd08248         232 LDTVG  236 (350)
T ss_pred             EECCC
Confidence            98876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=90.51  E-value=1.3  Score=39.55  Aligned_cols=70  Identities=16%  Similarity=0.186  Sum_probs=42.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.| +++||...++..-..|++|++++++.++..+..+++     +.. .+  .|..+.+.+.       +..+.+|++
T Consensus       183 lV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l-----Ga~-~~--i~~~~~~~v~-------~~~~~~D~v  246 (375)
T PLN02178        183 GVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL-----GAD-SF--LVTTDSQKMK-------EAVGTMDFI  246 (375)
T ss_pred             EEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC-----CCc-EE--EcCcCHHHHH-------HhhCCCcEE
Confidence            3555 489999988888788999999888765433333332     222 12  2333322221       112368999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      +.+.|.
T Consensus       247 id~~G~  252 (375)
T PLN02178        247 IDTVSA  252 (375)
T ss_pred             EECCCc
Confidence            998873

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=90.48  E-value=2.6  Score=36.43  Aligned_cols=34  Identities=26%  Similarity=0.200  Sum_probs=29.8

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      |.|-+|..+++.|++.|++|++++|+++..+++.
T Consensus         7 GlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~   40 (301)
T PRK09599          7 GLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALA   40 (301)
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence            4678999999999999999999999988776653

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=90.39  E-value=1.1  Score=39.62  Aligned_cols=69  Identities=17%  Similarity=0.186  Sum_probs=41.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||.| +++||..+++.+-..|++|++++.+.++..+..+++     +.. .+  .|..+.+.+.       +..+.+|++
T Consensus       188 lV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~-----Ga~-~v--i~~~~~~~~~-------~~~~~~D~v  251 (360)
T PLN02586        188 GVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL-----GAD-SF--LVSTDPEKMK-------AAIGTMDYI  251 (360)
T ss_pred             EEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC-----CCc-EE--EcCCCHHHHH-------hhcCCCCEE
Confidence            3544 599999988888788999988887765544443332     221 12  2333322222       112358999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |.+.|
T Consensus       252 id~~g  256 (360)
T PLN02586        252 IDTVS  256 (360)
T ss_pred             EECCC
Confidence            98877

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	288
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		2e-24

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 129/290 (44%), Gaps = 30/290 (10%)
Query: 1   MLAGGASGIGLETARVLALRKAHVIIXXXXXXXXXXXXQLILKEDDTARVDTLKLDLSSI 60
           ++ G  SG+G  TAR LA R A VI+            + +       +V+  +LDL  +
Sbjct: 20  VITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDL 74
Query: 61  ASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +S++ FA                   M  PY ++ DG E Q  TNH+GHF LTNLLL  +
Sbjct: 75  SSVRRFADGVSGADVLINNAGI----MAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL 130
Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA-GYSDKKAYGQSKLANILHANE 179
                      R+V +SS+AH   + G I  + +N R+  YS   AY QSKLAN+L  +E
Sbjct: 131 T---------DRVVTVSSMAH---WPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSE 178
Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM--RFLKFFSFFLWKNVPQGAATTCYV 237
           L RR    G  + A + HPG   TNL   S   +    +   +  +  +   GA  T Y 
Sbjct: 179 LQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYA 238
Query: 238 ALHPNLKG--VTGKYFLDCNEMPP---SALARDETLAKKLWDFSNKMINS 282
           A   +L G    G  F       P   S  A+D  +A  LW  S ++  +
Sbjct: 239 ASQ-DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKT 287

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	288
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-126
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	6e-82
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	4e-60
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	3e-30
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-29
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-29
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	6e-28
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-26
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-26
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-26
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	7e-26
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-25
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-25
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	5e-25
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	9e-25
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-24
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-24
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-24
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	5e-24
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	6e-24
1xhl_A	297	Short-chain dehydrogenase/reductase family member	7e-24
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	8e-24
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	8e-24
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-23
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-23
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-23
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-23
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-23
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-23
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-23
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	6e-23
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	6e-23
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	8e-23
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	9e-23
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-22
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	4e-22
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-22
3imf_A	257	Short chain dehydrogenase; structural genomics, in	5e-22
4e4y_A	244	Short chain dehydrogenase family protein; structur	5e-22
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	7e-22
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	7e-22
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	8e-22
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	8e-22
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	9e-22
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-21
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-21
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-21
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	1e-21
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-21
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	2e-21
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-21
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	3e-21
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	3e-21
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-21
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	3e-21
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-21
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	3e-21
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-21
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	4e-21
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	5e-21
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	6e-21
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	7e-21
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	7e-21
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	9e-21
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-20
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-20
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-20
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-20
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-20
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-20
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-20
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-20
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-20
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-20
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-20
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-20
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	4e-20
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-20
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-20
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	5e-20
4dqx_A	277	Probable oxidoreductase protein; structural genomi	5e-20
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	5e-20
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	7e-20
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	7e-20
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	8e-20
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	9e-20
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	9e-20
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-19
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-19
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-19
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-19
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-19
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	3e-19
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-19
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-19
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-19
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-19
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-19
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-19
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	4e-19
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	5e-19
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-19
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	6e-19
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	6e-19
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	8e-19
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-18
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-18
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-18
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-18
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-18
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-18
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-18
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-18
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	3e-18
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-18
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-18
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	5e-18
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	6e-18
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-18
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	7e-18
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	7e-18
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	8e-18
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-18
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-17
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-17
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-17
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-17
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-17
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-17
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	3e-17
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-17
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-17
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	4e-17
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-17
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	5e-17
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	5e-17
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	5e-17
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	6e-17
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-16
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-16
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-16
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-16
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-16
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-16
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-16
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	4e-16
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	4e-16
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	4e-16
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	5e-16
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	5e-16
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-16
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	8e-16
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	8e-16
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-15
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-15
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-15
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-15
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	4e-15
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	5e-15
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	5e-15
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	6e-15
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	8e-15
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	8e-15
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	8e-15
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-14
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-14
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-14
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-14
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-14
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-14
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-14
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-14
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-14
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-14
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-14
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-14
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	8e-14
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-13
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	1e-13
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	1e-13
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-13
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	4e-12
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-08
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-08
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-07
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	8e-08
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-06
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-06

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  361 bits (928), Expect = e-126
 Identities = 96/283 (33%), Positives = 134/283 (47%), Gaps = 28/283 (9%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SG+G  TAR LA R A VI+A R+      A + +       +V+  +LDL  ++S+
Sbjct: 23  GANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSV 77

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           + FA      +    +LINNAGIM  PY ++ DG E Q  TNH+GHF LTNLLL  +   
Sbjct: 78  RRFADGVSGAD----VLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL--- 130

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA-GYSDKKAYGQSKLANILHANELSR 182
                   R+V +SS+AH     G I  + +N R+  YS   AY QSKLAN+L  +EL R
Sbjct: 131 ------TDRVVTVSSMAHWP---GRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQR 181

Query: 183 RFQEEGVNITANSVHPGLIMTNLFKH--SAVVMRFLKFFSFFLWKNVPQGAATTCYVALH 240
           R    G  + A + HPG   TNL       +    +   +  +  +   GA  T Y A  
Sbjct: 182 RLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQ 241

Query: 241 PN----LKGVTGKYFLDCNEMPPSALARDETLAKKLWDFSNKM 279
                   G    Y      +  S  A+D  +A  LW  S ++
Sbjct: 242 DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQL 284

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  247 bits (632), Expect = 6e-82
 Identities = 64/287 (22%), Positives = 104/287 (36%), Gaps = 54/287 (18%)

Query: 4   GGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG  GIGL   R L       V++ AR++     A Q +  E         +LD+  + S
Sbjct: 11  GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQS 68

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQI--SEDGIEMQFATNHIGHFLLTNLLLDTM 120
           I+            L++L+NNAGI F            E+   TN  G   +   LL  +
Sbjct: 69  IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 128

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTY-------KGGIRFQKIND----------------- 156
                     GR+VN+SSI             +   R + I +                 
Sbjct: 129 KPQ-------GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG 181

Query: 157 --RAGYSDKKAYGQSKLANILHANELSRRFQE--EGVNITANSVHPGLIMTNLFKHSAVV 212
             +       AYG +K+   + +   +R+  E  +G  I  N+  PG + T++    A  
Sbjct: 182 VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT- 240

Query: 213 MRFLKFFSFFLWKNVPQGAATTCYVA-LHPNLKGVTGKYFLDCNEMP 258
                       K+  +GA T  Y+A L P+ +G  G++  +     
Sbjct: 241 ------------KSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ 275

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  192 bits (490), Expect = 4e-60
 Identities = 57/316 (18%), Positives = 95/316 (30%), Gaps = 85/316 (26%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IAS 62
           GG  GIG E  + L+     V++  R++   +EA +  LK  +   V   +LD++  IA+
Sbjct: 19  GGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVE-KLKNSNHENVVFHQLDVTDPIAT 77

Query: 63  IKDFAQNFIALNLPLNILINNAGIMF--------------------------------CP 90
           +   A         L+IL+NNAG+                                    
Sbjct: 78  MSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQEL 137

Query: 91  YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ-------- 142
              + +  E     N+ G   +T +L+  +  +        RIVN+SS            
Sbjct: 138 MSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS-----PRIVNVSSSTGSLKYVSNET 192

Query: 143 --------------------YTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSR 182
                                      +   I      S   AY  SK     +   L+ 
Sbjct: 193 ALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN 252

Query: 183 RFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPN 242
           +          N V PGL+ T +                       +GA     +AL P+
Sbjct: 253 KIP----KFQVNCVCPGLVKTEMNYGIGN-------------YTAEEGAEHVVRIALFPD 295

Query: 243 LKGVTGKYFLDCNEMP 258
             G +G ++       
Sbjct: 296 -DGPSGFFYDCSELSA 310

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  113 bits (286), Expect = 3e-30
 Identities = 54/212 (25%), Positives = 78/212 (36%), Gaps = 33/212 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG  TA   A  K+ +++   N     E       +   A+V T  +D S+   I
Sbjct: 38  GAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC--KGLGAKVHTFVVDCSNREDI 95

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
              A+   A    ++IL+NNAG+++        +  IE  F  N + HF  T   L  M 
Sbjct: 96  YSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAM- 154

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI-----LH 176
               +    G IV ++S A       G                AY  SK A +     L 
Sbjct: 155 ---TKNN-HGHIVTVASAA-------GH--------VSVPFLLAYCSSKFAAVGFHKTLT 195

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
             EL    Q  GV  T   + P  + T   K+
Sbjct: 196 D-EL-AALQITGVKTTC--LCPNFVNTGFIKN 223

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  110 bits (278), Expect = 3e-29
 Identities = 53/222 (23%), Positives = 83/222 (37%), Gaps = 34/222 (15%)

Query: 5   GAS-GIGLETARVLALRKA---HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           G + G+GL   + L        H+    RN   A E   L     + + +  L++DL + 
Sbjct: 28  GCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL---AKNHSNIHILEIDLRNF 84

Query: 61  ASIKDFAQNF--IALNLPLNILINNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNL 115
            +      +   +  +  LN+L NNAGI         +    +     TN +   +L   
Sbjct: 85  DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKA 144

Query: 116 LLDTMNRTAKETGIE------GRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQS 169
            L  + + AK    +        I+N+SSI       G I   + N   G     AY  S
Sbjct: 145 CLPLLKKAAKANESQPMGVGRAAIINMSSIL------GSI---QGNTDGGMY---AYRTS 192

Query: 170 KLA-NILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA 210
           K A N      LS     +   I   S+HPG + T++   SA
Sbjct: 193 KSALNAA-TKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSSA 231

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  109 bits (275), Expect = 6e-29
 Identities = 58/262 (22%), Positives = 97/262 (37%), Gaps = 45/262 (17%)

Query: 5   GAS-GIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           GA+ GIGL   + L   K   H+I  AR++  A E + +       +RV  L L ++   
Sbjct: 10  GANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-----KDSRVHVLPLTVTCDK 64

Query: 62  SIKDFAQNFIAL--NLPLNILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLL 116
           S+  F      +  +  L++LINNAG++       + +   I  Q   N     LLT  L
Sbjct: 65  SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL 124

Query: 117 LDTMNRTAKETGIE------GRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK 170
           L  +   A +   +        ++ +SS        G I        +      AY  SK
Sbjct: 125 LPLLKNAASKESGDQLSVSRAAVITISSGL------GSI--TDNTSGSAQFPVLAYRMSK 176

Query: 171 LA-NILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQ 229
            A N+     L+   +++   +   +  PG + TNL   +A +              V Q
Sbjct: 177 AAINMF-GRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKNAAL-------------TVEQ 220

Query: 230 GAATTCYVALHPNLKGVTGKYF 251
             A         +     G++F
Sbjct: 221 STAELISSFNKLDNSH-NGRFF 241

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  107 bits (269), Expect = 6e-28
 Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 34/217 (15%)

Query: 4   GGASGIGLETARVLA---LRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           G + G G   A  LA      + ++++AR+ +   + ++ +  +    +V     DL + 
Sbjct: 13  GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE 72

Query: 61  ASIKDFAQNFIAL----NLPLNILINNAGIMFCPY-----QISEDGIEMQFATNHIGHFL 111
           A ++        L     L   +LINNA  +               +   +A N      
Sbjct: 73  AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLC 132

Query: 112 LTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKL 171
           LT+  L+         G+   +VN+SS+     YKG                  Y   K 
Sbjct: 133 LTSGTLNAF---QDSPGLSKTVVNISSLCALQPYKGWG---------------LYCAGKA 174

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           A     + L +    E  ++   S  PG +  ++ + 
Sbjct: 175 A----RDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQL 207

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  103 bits (259), Expect = 1e-26
 Identities = 35/213 (16%), Positives = 65/213 (30%), Gaps = 30/213 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SG+G      L  R   V +  R      +   L+        V  +  DL+    +
Sbjct: 10  GAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDV 64

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                  +       ++++ AG   F P    + + I     +N +   L+    +  + 
Sbjct: 65  DVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLI- 123

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
               E G  G + N+ S A Q               + Y   K  G       L   EL 
Sbjct: 124 ---GERG--GVLANVLSSAAQVGKANE---------SLYCASKW-GMRGFLESL-RAELK 167

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR 214
                    +   +++P  I +  + ++  V  
Sbjct: 168 DS------PLRLVNLYPSGIRSEFWDNTDHVDP 194

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  103 bits (258), Expect = 2e-26
 Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 24/213 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANE-ARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIG   A  LA     V++ AR+     +   +++           L LD++    
Sbjct: 14  GASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTK 73

Query: 63  IKDFAQNFIALNLPLNILINNAGIM-FCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                ++       ++IL+N A +          D        N I  + +   + + M 
Sbjct: 74  ADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIM- 132

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              K     G I N++S A +Y +  G           Y   K      LA  L   EL+
Sbjct: 133 ---KVQK-NGYIFNVASRAAKYGFADG---------GIYGSTKF-ALLGLAESL-YRELA 177

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR 214
                    I   ++ PG + T++ K +    +
Sbjct: 178 PL------GIRVTTLCPGWVNTDMAKKAGTPFK 204

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  103 bits (259), Expect = 4e-26
 Identities = 46/211 (21%), Positives = 75/211 (35%), Gaps = 24/211 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA+G+G+   R L  +   V IA     + ++A   +  E     V  ++LD++S    
Sbjct: 15  GGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGF 74

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDTM- 120
           K  A    A   P++IL NNAG+       + S D  +     N  G        +  M 
Sbjct: 75  KMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMV 134

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            R        G +VN +S+A                         Y  +K A       L
Sbjct: 135 ERVKAGEQKGGHVVNTASMA-------AF--------LAAGSPGIYNTTKFAVRG----L 175

Query: 181 SR--RFQEEGVNITANSVHPGLIMTNLFKHS 209
           S    +      I  + + PGL+ + ++   
Sbjct: 176 SESLHYSLLKYEIGVSVLCPGLVKSYIYASD 206

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  102 bits (257), Expect = 7e-26
 Identities = 46/214 (21%), Positives = 77/214 (35%), Gaps = 35/214 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASGIGL TA   A R A ++++  +  A  +A   +           +  D+  +  +
Sbjct: 38  GGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGL--RGQGFDAHGVVCDVRHLDEM 95

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
              A     L   ++++ +NAGI+      Q++ D        +  G        L  + 
Sbjct: 96  VRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRL- 154

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK-----LANILH 176
               E G  G I   +S A       G+           +    YG +K     LA  L 
Sbjct: 155 ---LEQGTGGHIAFTASFA-------GL--------VPNAGLGTYGVAKYGVVGLAETL- 195

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA 210
           A E+          I  + + P ++ T L  +S 
Sbjct: 196 AREVKPN------GIGVSVLCPMVVETKLVSNSE 223

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  101 bits (253), Expect = 2e-25
 Identities = 46/210 (21%), Positives = 75/210 (35%), Gaps = 28/210 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG E A  LA   AHV++ AR+     +       E   A    +   +  +   
Sbjct: 35  GASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC-LELGAASAHYIAGTMEDMTFA 93

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           + F      L   L++LI N                +      N + + +LT   L  + 
Sbjct: 94  EQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK 153

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA--NE 179
           ++       G IV +SS+A      G + +      A YS   A   SK A  L    + 
Sbjct: 154 QS------NGSIVVVSSLA------GKVAYPM---VAAYS---A---SKFA--LDGFFSS 190

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKHS 209
           + + +    VN++      GLI T     +
Sbjct: 191 IRKEYSVSRVNVSITLCVLGLIDTETAMKA 220

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  100 bits (251), Expect = 3e-25
 Identities = 54/215 (25%), Positives = 79/215 (36%), Gaps = 37/215 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE-DDTARVDTLKLDLSSIAS 62
           G ++GIG  TA + A   A V I  R+     E RQ IL        V+++  D+++ A 
Sbjct: 13  GSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAG 72

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQ------ISEDGIEMQFATNHIGHFLLTNLL 116
             +     +     L+IL+NNAG      Q       S +  +     N      LT   
Sbjct: 73  QDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKA 132

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL- 175
           +  +      T   G IVN+SSIA       G+            D   Y  +K A    
Sbjct: 133 VPHL----SSTK--GEIVNISSIA------SGLH--------ATPDFPYYSIAKAAIDQY 172

Query: 176 ---HANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
               A +L +        I  NS+ PGL+ T    
Sbjct: 173 TRNTAIDLIQH------GIRVNSISPGLVATGFGS 201

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 98.8 bits (247), Expect = 5e-25
 Identities = 35/212 (16%), Positives = 73/212 (34%), Gaps = 34/212 (16%)

Query: 5   GAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GAS G+G E A++         +  R+ +  +      +    +  V     DL+S   +
Sbjct: 8   GASSGLGAELAKLYDAEGKATYLTGRSESKLST-----VTNCLSNNVGYRARDLASHQEV 62

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +   +    L+   + ++++AG  +     +   + I+     N      +   L+    
Sbjct: 63  EQLFE---QLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRY- 118

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              K+      +V + S A Q               + Y   K   +  L   +   EL 
Sbjct: 119 ---KDQP--VNVVMIMSTAAQQPKAQE---------STYCAVKWAVKG-LIESVRL-ELK 162

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSAVVM 213
            +     + I A  V+PG + T  ++ S   +
Sbjct: 163 GK----PMKIIA--VYPGGMATEFWETSGKSL 188

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 98.8 bits (247), Expect = 9e-25
 Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 35/207 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIGL  A   A   AH+++ AR +   +EA + + KE    RV  + +D+++   +
Sbjct: 14  GSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL-KEKFGVRVLEVAVDVATPEGV 72

Query: 64  KDFAQNFIALNLPLNILINNAGIMF--CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
               ++  +     +IL+NNAG        + +++  +  +    +    L   L+  M 
Sbjct: 73  DAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGM- 131

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI-----LH 176
              +  G  G I++ +SI                       +  Y  +K A +     L 
Sbjct: 132 ---RARG-GGAIIHNASICA---------------VQPLWYEPIYNVTKAALMMFSKTL- 171

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMT 203
           A E+ +       NI  N ++PGLI+T
Sbjct: 172 ATEVIKD------NIRVNCINPGLILT 192

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 98.8 bits (247), Expect = 1e-24
 Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 28/206 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG + AR  A   A ++++ R+++  + AR+ +  E     V T+ +DL+   + 
Sbjct: 27  GATKGIGADIARAFAAAGARLVLSGRDVSELDAARRAL-GEQFGTDVHTVAIDLAEPDAP 85

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
            + A+        L++L+NNAGI    P         +   A N     LL + +   M 
Sbjct: 86  AELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAM- 144

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHANE 179
                 G  G I+ ++S A                   Y   KA     +K+     A E
Sbjct: 145 ---VAAGEGGAIITVASAA---ALAPLPD------HYAYCTSKAGLVMATKVL----ARE 188

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNL 205
           L          I ANSV P +++T +
Sbjct: 189 LGPH------GIRANSVCPTVVLTEM 208

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 97.9 bits (245), Expect = 2e-24
 Identities = 51/206 (24%), Positives = 74/206 (35%), Gaps = 24/206 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIGL  A       A V+I  R+     +A + +    D  +    + D S     
Sbjct: 13  GGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV-GTPDQIQ--FFQHDSSDEDGW 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                       P++ L+NNAGI       + +        A N  G F  T L +  M 
Sbjct: 70  TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRM- 128

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              K  G+   I+N+SSI        G          G     AY  SK A  + +   +
Sbjct: 129 ---KNKGLGASIINMSSIE-------GFV--------GDPSLGAYNASKGAVRIMSKSAA 170

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFK 207
                +  ++  N+VHPG I T L  
Sbjct: 171 LDCALKDYDVRVNTVHPGYIKTPLVD 196

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 97.3 bits (243), Expect = 4e-24
 Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 27/206 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG   A  L L+ A V +   N+ A  + +  + ++ +  +   ++ D++    +
Sbjct: 14  GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQL 73

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           +D  +  +     L+IL+NNAG+       +E   E     N +     T L LD M++ 
Sbjct: 74  RDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSK- 126

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHANELS 181
            +  G  G I+N+SS+A        +  Q       Y   K    G ++ A +  A  L 
Sbjct: 127 -QNGGEGGIIINMSSLAGLM----PVAQQ-----PVYCASKHGIVGFTRSAAL--AANLM 174

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFK 207
                    +  N++ PG + T + +
Sbjct: 175 NS------GVRLNAICPGFVNTAILE 194

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 96.4 bits (241), Expect = 5e-24
 Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 33/204 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG +T + L    A V+   R  +      +          ++ + +DL    + 
Sbjct: 14  GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDAT 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMF-CPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +           P+++L+NNA ++   P+ +++++  +  F+ N    F ++ ++   M 
Sbjct: 68  EKALGGI----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDM- 122

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                 G+ G IVN+SS+     +              YS  K    + L   + A EL 
Sbjct: 123 ---INRGVPGSIVNVSSMV---AHVTFPN------LITYSSTKG-AMTMLTKAM-AMELG 168

Query: 182 RRFQEEGVNITANSVHPGLIMTNL 205
                    I  NSV+P +++T++
Sbjct: 169 PH------KIRVNSVNPTVVLTDM 186

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 96.8 bits (242), Expect = 6e-24
 Identities = 41/204 (20%), Positives = 73/204 (35%), Gaps = 29/204 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
            G+SG+G  +A  LA   A +++ +RN      A   I      A+VD +  D+     I
Sbjct: 14  AGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDI 73

Query: 64  KDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
               +    L    +IL+ + G      F   ++  +  +  +         +     + 
Sbjct: 74  DRLFEKARDLG-GADILVYSTGGPRPGRF--MELGVEDWDESYRLLARSAVWVGRRAAEQ 130

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           M     E G  GR+V + S+          +       A  +  +      +   L A E
Sbjct: 131 M----VEKG-WGRMVYIGSVTL----LRPWQDL-----ALSNIMRL-PVIGVVRTL-ALE 174

Query: 180 LSRRFQEEGVNITANSVHPGLIMT 203
           L+         +T N+V P LI+T
Sbjct: 175 LAPH------GVTVNAVLPSLILT 192

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 97.3 bits (243), Expect = 7e-24
 Identities = 50/214 (23%), Positives = 80/214 (37%), Gaps = 37/214 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA-RVDTLKLDLSSIAS 62
           G ++GIG   A + A   A V I  RN     E +Q ILK    A +++ +  D++  + 
Sbjct: 33  GSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASG 92

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQ----ISEDGIEMQFATNHIGHFLLTNLLLD 118
             D     +A    ++IL+NNAG              +  +  F  N      +T    +
Sbjct: 93  QDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKE 152

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH-- 176
            +     +T   G IVN+SSI        G +         +S    Y  +K A +    
Sbjct: 153 HL----IKTK--GEIVNVSSIV------AGPQ--------AHSGYPYYACAK-AALDQYT 191

Query: 177 ---ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
              A +L +        +  NSV PG + T    
Sbjct: 192 RCTAIDLIQH------GVRVNSVSPGAVATGFMG 219

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 96.5 bits (241), Expect = 8e-24
 Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 28/204 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+SGIGL T  +L    A V   AR+      A   + +    AR+     D+     +
Sbjct: 15  GGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQV 74

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           + FA+         +IL+NNAG      + + +++    +               L  + 
Sbjct: 75  RAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLE 134

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHANE 179
             A        IV ++S+                     S  +A      +      A E
Sbjct: 135 SRAD-----AAIVCVNSLLASQPEPH---------MVATSAARAGVKNLVRSM----AFE 176

Query: 180 LSRRFQEEGVNITANSVHPGLIMT 203
            + +       +  N +  GL+ +
Sbjct: 177 FAPK------GVRVNGILIGLVES 194

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 96.1 bits (240), Expect = 8e-24
 Identities = 61/234 (26%), Positives = 83/234 (35%), Gaps = 41/234 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  G+GL T R L    A V++  RN +     R+         RV  L+ D++ +  I
Sbjct: 15  GGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEI 69

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                        +++L  NAG+    P+ Q+SE   + QFA N  G F     L   + 
Sbjct: 70  AVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIR 129

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK-----LANILH 176
                    G IV  SS+A      G           G S    Y  SK      A++L 
Sbjct: 130 E-------GGSIVFTSSVA---DEGGH---------PGMS---VYSASKAALVSFASVL- 166

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQG 230
           A EL  R       I  NSV PG I T     + +       F        P  
Sbjct: 167 AAELLPR------GIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMK 214

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 95.7 bits (239), Expect = 1e-23
 Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 28/207 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   AR LA     + + AR++    +    +++E     V    LD+S   S+
Sbjct: 9   GASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLDVSKAESV 67

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           ++F++  +     +++++ NAG+  F    ++SE+        N +G +      LD++ 
Sbjct: 68  EEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL- 126

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              K TG    +V  S ++       G          GY   K            A  L 
Sbjct: 127 ---KRTG-GLALVTTSDVSA-RLIPYG---------GGYVSTKWA--------ARA--LV 162

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
           R FQ E  ++    + PG + T     
Sbjct: 163 RTFQIENPDVRFFELRPGAVDTYFGGS 189

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 95.6 bits (239), Expect = 1e-23
 Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 37/206 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG  T + L    A V+  +R  A  +   +          ++ + +DL    + 
Sbjct: 14  GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEAT 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMF-CPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +    +      P+++L+NNA +    P+ +++++  +  F  N      ++ ++   + 
Sbjct: 68  ERALGSV----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGL- 122

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHANE 179
                 G+ G IVN+SS     + +           + Y   K      +K+     A E
Sbjct: 123 ---IARGVPGAIVNVSSQC---SQRAVTN------HSVYCSTKGALDMLTKVM----ALE 166

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNL 205
           L          I  N+V+P ++MT++
Sbjct: 167 LGPH------KIRVNAVNPTVVMTSM 186

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 95.7 bits (239), Expect = 2e-23
 Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 40/208 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  +GIG   A  L    A+V+I  R     NE  + I  +   A +  +  DL +    
Sbjct: 17  GSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGC 76

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +D  + +      ++ILINN GI F P   + I ++     F  N +    LT   L  M
Sbjct: 77  QDVIEKYPK----VDILINNLGI-FEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKM 131

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI-----L 175
                E   EGR++ ++S A        I            +   Y  +K   +     L
Sbjct: 132 ----IERK-EGRVIFIASEA-------AI--------MPSQEMAHYSATKTMQLSLSRSL 171

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMT 203
            A   +        N+T N++ PG  +T
Sbjct: 172 -AELTTGT------NVTVNTIMPGSTLT 192

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 94.9 bits (237), Expect = 2e-23
 Identities = 50/217 (23%), Positives = 77/217 (35%), Gaps = 35/217 (16%)

Query: 1   MLAG------GA-SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTL 53
           M+        GA  GIG   AR L +  A +++ AR  A        I   D        
Sbjct: 1   MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEI--RDAGGTALAQ 58

Query: 54  KLDLSSIASIKDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFL 111
            LD++   S+  FAQ  +     +++L+NNAG+M   P   +  D  E     N  G   
Sbjct: 59  VLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLW 118

Query: 112 LTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKL 171
               +L  M    +     G+I+N+ SI                  A Y   K       
Sbjct: 119 GIGAVLPIM----EAQR-SGQIINIGSIGALSVVPTA---------AVYCATKFA----- 159

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
                   +S   ++E  NI    V+PG++ + L   
Sbjct: 160 -----VRAISDGLRQESTNIRVTCVNPGVVESELAGT 191

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 95.3 bits (238), Expect = 3e-23
 Identities = 48/216 (22%), Positives = 80/216 (37%), Gaps = 39/216 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE-DDTARVDTLKLDLSSIAS 62
           G ++GIG  TA + A   A+V I  R+     E RQ+ILK      +V+++  D+++   
Sbjct: 13  GSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDG 72

Query: 63  IKDFAQNFIALNLPLNILINNAGI------MFCPYQISEDGIEMQFATNHIGHFLLTNLL 116
                 + +     +++L+NNAG                D        N      +T  +
Sbjct: 73  QDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKV 132

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              +      +   G IVN+SSI        G +           D   Y  +K A +  
Sbjct: 133 KPHL----VASK--GEIVNVSSIVA------GPQ--------AQPDFLYYAIAK-AALDQ 171

Query: 177 -----ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
                A +L++        I  NSV PG++ T    
Sbjct: 172 YTRSTAIDLAKF------GIRVNSVSPGMVETGFTN 201

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 94.9 bits (237), Expect = 3e-23
 Identities = 56/209 (26%), Positives = 78/209 (37%), Gaps = 32/209 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ GIG   A+ L    A V I AR+  A  +    +           +  DLSS A  
Sbjct: 36  GGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL---SAYGDCQAIPADLSSEAGA 92

Query: 64  KDFAQNFIALNLPLNILINNAGIMF-CPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +  AQ    L+  L+IL+NNAG  +          G E     N    F     LL  + 
Sbjct: 93  RRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLR 152

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH----- 176
           R+A       R++N+ S+A       GI          Y    AYG SK A +       
Sbjct: 153 RSASAENP-ARVINIGSVA-------GIS---AMGEQAY----AYGPSK-AALHQLSRML 196

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNL 205
           A EL         +I  N + PG   + +
Sbjct: 197 AKELVGE------HINVNVIAPGRFPSRM 219

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 94.5 bits (236), Expect = 5e-23
 Identities = 41/206 (19%), Positives = 65/206 (31%), Gaps = 31/206 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIGL  A+      A V I  R     + A   I           ++ D +++A +
Sbjct: 36  GATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAEL 90

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
               +   A    +++L  NAG     P  +++E+  +  F  N  G        L  + 
Sbjct: 91  DRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA 150

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           R          +V   S A                 + Y+  KA      A      +L 
Sbjct: 151 R-------GSSVVLTGSTAGSTGTPA---------FSVYAASKA-ALRSFARNW-ILDLK 192

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFK 207
            R       I  N++ PG   T    
Sbjct: 193 DR------GIRINTLSPGPTETTGLV 212

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 94.1 bits (235), Expect = 6e-23
 Identities = 52/214 (24%), Positives = 76/214 (35%), Gaps = 45/214 (21%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ GIG      LA   A V   +RN    +E  ++    +    V+    DL S    
Sbjct: 28  GGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIW--REKGLNVEGSVCDLLSRTER 85

Query: 64  KDFAQNFIA-LNLPLNILINNAGIMFCPYQISEDGIEMQ-------FATNHIGHFLLTNL 115
               Q      +  LNIL+NNAG+      I ++  +           TN    + L+ +
Sbjct: 86  DKLMQTVAHVFDGKLNILVNNAGV-----VIHKEAKDFTEKDYNIIMGTNFEAAYHLSQI 140

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
               +    K +   G ++ LSSIA                         Y  SK A   
Sbjct: 141 AYPLL----KASQ-NGNVIFLSSIAGFSALPSVS---------------LYSASKGAINQ 180

Query: 176 ----HANELSRRFQEEGVNITANSVHPGLIMTNL 205
                A E ++       NI  NSV PG+I+T L
Sbjct: 181 MTKSLACEWAKD------NIRVNSVAPGVILTPL 208

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 93.9 bits (234), Expect = 6e-23
 Identities = 44/207 (21%), Positives = 70/207 (33%), Gaps = 31/207 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS-SIAS 62
               GIGL+T+R L  R     +    +       +L         +     D++  +A 
Sbjct: 12  AALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKV-NITFHTYDVTVPVAE 70

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
            K   +        ++ILIN AGI+       +  IE   A N  G    T  +LD  ++
Sbjct: 71  SKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDK 124

Query: 123 TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHANEL 180
             ++ G  G I N+ S+                    YS  KA     +       A   
Sbjct: 125 --RKGGPGGIIANICSVTGFNAIHQV---------PVYSASKAAVVSFTNSL----AKLA 169

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFK 207
                     +TA S++PG+  T L  
Sbjct: 170 PIT------GVTAYSINPGITRTPLVH 190

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 93.4 bits (233), Expect = 8e-23
 Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 31/208 (14%)

Query: 5   GAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GA+ G G    R    +   VI   R      E     LK++    +   +LD+ + A+I
Sbjct: 7   GATAGFGECITRRFIQQGHKVIATGRRQERLQE-----LKDELGDNLYIAQLDVRNRAAI 61

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           ++   +  A    ++IL+NNAG+       ++ S +  E    TN+ G   +T  +L  M
Sbjct: 62  EEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGM 121

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                E    G I+N+ S A  + Y GG           Y   KA    + +  L     
Sbjct: 122 ----VERN-HGHIINIGSTAGSWPYAGG---------NVYGATKA-FVRQFSLNL----- 161

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKH 208
             R    G  +    + PGL+    F +
Sbjct: 162 --RTDLHGTAVRVTDIEPGLVGGTEFSN 187

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 93.5 bits (233), Expect = 9e-23
 Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 37/211 (17%)

Query: 4   GGASGIGLETARVLALRKAHVII--AARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           G + GIG     VL       ++   AR+ A   +     LKE    R   +  D++  +
Sbjct: 9   GVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKK-----LKEKYGDRFFYVVGDITEDS 63

Query: 62  SIKDFAQNFIALNLPLNILINNAGIMFCPYQ----ISEDGIEMQFATNHIGHFLLTNLLL 117
            +K      +  +  ++ L+ NAG++  P Q    I  +  +  +  N      L  + L
Sbjct: 64  VLKQLVNAAVKGHGKIDSLVANAGVLE-PVQNVNEIDVNAWKKLYDINFFSIVSLVGIAL 122

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
             +    K+T   G +V +SS A                   +S   AYG SK A     
Sbjct: 123 PEL----KKTN--GNVVFVSSDA-------CNM--------YFSSWGAYGSSKAA----L 157

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           N  +     E   + A +V PG++ T++  +
Sbjct: 158 NHFAMTLANEERQVKAIAVAPGIVDTDMQVN 188

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 91.0 bits (227), Expect = 4e-22
 Identities = 48/207 (23%), Positives = 76/207 (36%), Gaps = 30/207 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG  TAR+L  +   V + AR+           L  +       L  D+      
Sbjct: 12  GASRGIGEATARLLHAKGYRVGLMARDEKRLQA-----LAAELEG-ALPLPGDVREEGDW 65

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                        L+ L+NNAG+    P ++++ +   +   TN  G FL     +  + 
Sbjct: 66  ARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPAL- 124

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                 G  G IVN+ S+A +  +KGG         A Y+  K  G   LA      +L 
Sbjct: 125 ---LRRG-GGTIVNVGSLAGKNPFKGG---------AAYNASKF-GLLGLAGAAML-DLR 169

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
                   N+   +V PG + T    +
Sbjct: 170 ------EANVRVVNVLPGSVDTGFAGN 190

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 91.5 bits (228), Expect = 4e-22
 Identities = 36/207 (17%), Positives = 66/207 (31%), Gaps = 34/207 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   G+G+E  + L+ R   V    RN           L E     V+ ++ D+      
Sbjct: 12  GATGGMGIEIVKDLS-RDHIVYALGRNPEHLAA-----LAEI--EGVEPIESDIVKEVLE 63

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCPYQ-ISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +        L+  ++ L++ A +      +  S          N I    L+  LL  + 
Sbjct: 64  EGGVDKLKNLD-HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALR 122

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                    G ++ ++S A    + G            Y+  K      LA+     E +
Sbjct: 123 AA------SGCVIYINSGAGNGPHPGN---------TIYAASKH-ALRGLADAF-RKEEA 165

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
                    I  ++V PG   T + + 
Sbjct: 166 NN------GIRVSTVSPGPTNTPMLQG 186

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 92.4 bits (230), Expect = 4e-22
 Identities = 55/211 (26%), Positives = 82/211 (38%), Gaps = 29/211 (13%)

Query: 5   GA-SGIGLETARVLA---LRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           GA +GIG  TA            +I+AAR +    E ++ I +E   A+V   +LD++  
Sbjct: 40  GASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQA 99

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLL 117
             IK F +N       ++IL+NNAG         QI+ + I+  F TN      +T  +L
Sbjct: 100 EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVL 159

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
                  +     G IVNL SIA +  Y  G         + Y   K        + L  
Sbjct: 160 PIF----QAKN-SGDIVNLGSIAGRDAYPTG---------SIYCASKF-AVGAFTDSL-- 202

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
                R +     I    + PGL+ T     
Sbjct: 203 -----RKELINTKIRVILIAPGLVETEFSLV 228

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 91.4 bits (228), Expect = 5e-22
 Identities = 48/204 (23%), Positives = 78/204 (38%), Gaps = 28/204 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+SG+G   A   A   A V+I  R      EA+  I  E    ++ T+++D+ +   I
Sbjct: 13  GGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEI--EQFPGQILTVQMDVRNTDDI 70

Query: 64  KDFAQNFIALNLPLNILINNAGIMF-CPYQ-ISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +   +        ++ILINNA   F CP + +S +G          G F  +  +     
Sbjct: 71  QKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYW- 129

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHANE 179
               E GI+G I+N+ +                      +  KA     +K      A E
Sbjct: 130 ---IEKGIKGNIINMVATYAWD----AGPGV-----IHSAAAKAGVLAMTKTL----AVE 173

Query: 180 LSRRFQEEGVNITANSVHPGLIMT 203
             R++      I  N++ PG I  
Sbjct: 174 WGRKY-----GIRVNAIAPGPIER 192

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 91.1 bits (227), Expect = 5e-22
 Identities = 40/210 (19%), Positives = 67/210 (31%), Gaps = 47/210 (22%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ GIG     +L   K H +I      + +              +  +K DL+    I
Sbjct: 11  GGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-----------ENLKFIKADLTKQQDI 59

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
            +     I  N+  + +  NAGI+     + I  + I+     N          L + + 
Sbjct: 60  TNVLD--IIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLK 117

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL----HA 177
                      IV   S                       +  AY  SK A        A
Sbjct: 118 V-------GASIVFNGSDQ-------CFI--------AKPNSFAYTLSKGAIAQMTKSLA 155

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFK 207
            +L++        I  N+V PG + T+L++
Sbjct: 156 LDLAKY------QIRVNTVCPGTVDTDLYR 179

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 91.5 bits (228), Expect = 7e-22
 Identities = 48/211 (22%), Positives = 72/211 (34%), Gaps = 36/211 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA-RVDTLKLDLSSIAS 62
           GG SGIG   A  L    A V+I  RN      A Q +         +     D+++   
Sbjct: 18  GGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDE 77

Query: 63  IKDFAQNFIALNLPLNILINNAGIM--FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDT 119
                    A +  L+ +++ AG      P  Q+  +        N  G   +       
Sbjct: 78  TARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAARE 137

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH--- 176
           M    +  G  G  V +SSIA                   +    AYG +K + + H   
Sbjct: 138 M---VRGGG--GSFVGISSIA-------ASN--------THRWFGAYGVTK-SAVDHLMQ 176

Query: 177 --ANELSRRFQEEGVNITANSVHPGLIMTNL 205
             A+EL          +  NS+ PGLI T+L
Sbjct: 177 LAADELGAS------WVRVNSIRPGLIRTDL 201

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 91.1 bits (227), Expect = 7e-22
 Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 32/209 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G    +G   AR  A + A +++AAR +    +  + +   D   R  ++  D++  A +
Sbjct: 18  GVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQV--TDTGRRALSVGTDITDDAQV 75

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
                  +     ++++INNA  +    P+   + + +         G   L       +
Sbjct: 76  AHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPAL 135

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHAN 178
               +E+   G +VN++S+  +++               Y   K+     S+      A 
Sbjct: 136 ----EESK--GAVVNVNSMVVRHSQAK---------YGAYKMAKSALLAMSQTL----AT 176

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFK 207
           EL  +       I  NSV PG I     K
Sbjct: 177 ELGEK------GIRVNSVLPGYIWGGTLK 199

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 91.0 bits (227), Expect = 8e-22
 Identities = 50/216 (23%), Positives = 78/216 (36%), Gaps = 49/216 (22%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ GIG      LA   A V   +RN    N+            +V+    DLSS +  
Sbjct: 16  GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQW--RSKGFKVEASVCDLSSRSER 73

Query: 64  KDFAQNFIA-LNLPLNILINNAGIMFCPYQISEDGIEMQ-------FATNHIGHFLLTNL 115
           ++         +  LNIL+NNAGI      I ++  +          + N    + L+ L
Sbjct: 74  QELMNTVANHFHGKLNILVNNAGI-----VIYKEAKDYTVEDYSLIMSINFEAAYHLSVL 128

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLA--- 172
               +    K +   G +V +SS++                         YG +K A   
Sbjct: 129 AHPFL----KASE-RGNVVFISSVSGALAVPYEA---------------VYGATKGAMDQ 168

Query: 173 ---NILHANELSRRFQEEGVNITANSVHPGLIMTNL 205
               +  A E ++       NI  N V PG+I T+L
Sbjct: 169 LTRCL--AFEWAKD------NIRVNGVGPGVIATSL 196

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 91.1 bits (227), Expect = 8e-22
 Identities = 50/210 (23%), Positives = 70/210 (33%), Gaps = 32/210 (15%)

Query: 5   GA-SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED--DTARVDTLKLDLSSIA 61
           GA SG G   AR  A     +++  R            L  +     RV  L LD+   A
Sbjct: 28  GATSGFGEACARRFAEAGWSLVLTGRREERLQA-----LAGELSAKTRVLPLTLDVRDRA 82

Query: 62  SIKDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLD 118
           ++     N       L  LINNAG+            D  +    TN  G    T LLL 
Sbjct: 83  AMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLP 142

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            +       G    IVNL S+A ++ Y G            Y   KA    + +  L   
Sbjct: 143 RL----IAHGAGASIVNLGSVAGKWPYPGS---------HVYGGTKA-FVEQFSLNL--- 185

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
               R   +G  +   ++ PGL  +     
Sbjct: 186 ----RCDLQGTGVRVTNLEPGLCESEFSLV 211

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 90.6 bits (226), Expect = 9e-22
 Identities = 46/210 (21%), Positives = 79/210 (37%), Gaps = 41/210 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
               GIGL  AR LA   AHV++++R     +     +  + +   V      +      
Sbjct: 21  ASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATL--QGEGLSVTGTVCHVGKAEDR 78

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY-----QISEDGIEMQFATNHIGHFLLTNLLLD 118
           +      + L+  ++IL++NA +   P+       +E+  +     N     L+T  ++ 
Sbjct: 79  ERLVAMAVNLHGGVDILVSNAAVN--PFFGNIIDATEEVWDKILHVNVKATVLMTKAVVP 136

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH-- 176
            M    K  G  G ++ +SS+                    + +   Y  SK A +L   
Sbjct: 137 EM---EKRGG--GSVLIVSSVG-------AYH--------PFPNLGPYNVSKTA-LLGLT 175

Query: 177 ---ANELSRRFQEEGVNITANSVHPGLIMT 203
              A EL+ R      NI  N + PGLI T
Sbjct: 176 KNLAVELAPR------NIRVNCLAPGLIKT 199

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 90.2 bits (225), Expect = 1e-21
 Identities = 50/207 (24%), Positives = 77/207 (37%), Gaps = 28/207 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASG+GLE  ++L    A V  +  N AA  +    +       R   ++ D+SS A  
Sbjct: 13  GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADW 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                        LN+L+NNAGI+          +        N    F+     +  M 
Sbjct: 68  TLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAM- 126

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              KETG  G I+N++S++                         Y  SK A        +
Sbjct: 127 ---KETG--GSIINMASVS-------SWL--------PIEQYAGYSASKAAVSALTRAAA 166

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
              +++G  I  NS+HP  I T + + 
Sbjct: 167 LSCRKQGYAIRVNSIHPDGIYTPMMQA 193

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 90.7 bits (226), Expect = 1e-21
 Identities = 45/214 (21%), Positives = 75/214 (35%), Gaps = 40/214 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIG    R      A V+I  ++ +      Q +           +  D++    +
Sbjct: 16  GGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDV 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           K      I     L+ ++NNAG    P    + S  G       N +G + LT L L  +
Sbjct: 70  KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYL 129

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH---- 176
               +++   G ++N+SS+        G          G +    Y  +K A        
Sbjct: 130 ----RKSQ--GNVINISSLV-------GAI--------GQAQAVPYVATKGAVTAMTKAL 168

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA 210
           A + S         +  N + PG I T L++  A
Sbjct: 169 ALDESPY------GVRVNCISPGNIWTPLWEELA 196

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 90.2 bits (225), Expect = 1e-21
 Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 35/209 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A G+G   A  LA   A VI+         E+   +           +  D++   +I
Sbjct: 16  GSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL--TRKGYDAHGVAFDVTDELAI 73

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ-------FATNHIGHFLLTNLL 116
           +       A  + ++ILINNAGI     Q  +  +E++         TN    FL++   
Sbjct: 74  EAAFSKLDAEGIHVDILINNAGI-----QYRKPMVELELENWQKVIDTNLTSAFLVSRSA 128

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              M          G+I+N+ S+    +             A Y+  K  G   L   + 
Sbjct: 129 AKRM----IARNSGGKIINIGSLT---SQAARPT------VAPYTAAKG-GIKMLTCSM- 173

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNL 205
           A E ++       NI  N++ PG I+T++
Sbjct: 174 AAEWAQF------NIQTNAIGPGYILTDM 196

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 90.3 bits (225), Expect = 1e-21
 Identities = 53/207 (25%), Positives = 79/207 (38%), Gaps = 27/207 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG  TAR LA   A V IAAR +         +      A+V  L+LD++    +
Sbjct: 14  GASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL--TAAGAKVHVLELDVADRQGV 71

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                + +     L+IL+NNAGIM   P              TN +G   +T   L  + 
Sbjct: 72  DAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLL 131

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           R+       G +V +SSIA +   +           A Y   K          ++A   +
Sbjct: 132 RSK------GTVVQMSSIAGRVNVRNA---------AVYQATKFG--------VNAFSET 168

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
            R +     +    + PG   T L  H
Sbjct: 169 LRQEVTERGVRVVVIEPGTTDTELRGH 195

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 90.7 bits (226), Expect = 1e-21
 Identities = 49/211 (23%), Positives = 79/211 (37%), Gaps = 33/211 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG SG+G  TA  LA   A + +   +      ++  +L+    A V T   D+S  A +
Sbjct: 20  GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQV 79

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           + +          ++   NNAGI          +    +   + N  G FL    +L  M
Sbjct: 80  EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIM 139

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL----H 176
               +E G  G +VN +S+        GIR        G  ++  Y  +K   +      
Sbjct: 140 ----REQG-SGMVVNTASVG-------GIR--------GIGNQSGYAAAKHGVVGLTRNS 179

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
           A E  R        I  N++ PG I T + +
Sbjct: 180 AVEYGRY------GIRINAIAPGAIWTPMVE 204

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 89.9 bits (224), Expect = 2e-21
 Identities = 49/210 (23%), Positives = 80/210 (38%), Gaps = 35/210 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  +GIG E A   A   A V+++  N  AAN     I  +    +    + D++S   +
Sbjct: 18  GAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI--QQLGGQAFACRCDITSEQEL 75

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
              A   I+    ++IL+NNAG     P+ +        +  N    F L+ L+   M +
Sbjct: 76  SALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEK 135

Query: 123 TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH-----A 177
                   G I+ ++S+A                     +  +Y  SK A   H     A
Sbjct: 136 NGG-----GVILTITSMA-------AEN--------KNINMTSYASSK-AAASHLVRNMA 174

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFK 207
            +L  +      NI  N + PG I+T+  K
Sbjct: 175 FDLGEK------NIRVNGIAPGAILTDALK 198

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 89.9 bits (224), Expect = 2e-21
 Identities = 51/227 (22%), Positives = 81/227 (35%), Gaps = 52/227 (22%)

Query: 1   MLAG------GAS-GIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDT 52
           ML G      GAS GIG   A+ LA   A V I        A E    I  + +     +
Sbjct: 4   MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEI--QSNGGSAFS 61

Query: 53  LKLDLSSIASIKDFAQNFIALNLP------LNILINNAGIM-FCPY-QISEDGIEMQFAT 104
           +  +L S+  ++    +              +ILINNAGI       + +E   +   + 
Sbjct: 62  IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSV 121

Query: 105 NHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKK 164
           N    F +    L  +           RI+N+SS A + +               +    
Sbjct: 122 NAKAPFFIIQQALSRLRD-------NSRIINISSAATRISL------------PDFI--- 159

Query: 165 AYGQSK-----LANILHANELSRRFQEEGVNITANSVHPGLIMTNLF 206
           AY  +K     +   L A +L  R       IT N++ PG + T++ 
Sbjct: 160 AYSMTKGAINTMTFTL-AKQLGAR------GITVNAILPGFVKTDMN 199

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 90.0 bits (224), Expect = 3e-21
 Identities = 47/210 (22%), Positives = 77/210 (36%), Gaps = 25/210 (11%)

Query: 5   GAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GAS GIG   AR L  +   V+  AR +    E             +   + DLS+   I
Sbjct: 39  GASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDI 98

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                   + +  ++I INNAG+         S  G +  F  N +   + T     +M 
Sbjct: 99  LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSM- 157

Query: 122 RTAKETGI-EGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA-NE 179
              KE  + +G I+N++S++                         Y  +K A  + A  E
Sbjct: 158 ---KERNVDDGHIININSMSGHRVLPLS-------------VTHFYSATKYA--VTALTE 199

Query: 180 LSRR-FQEEGVNITANSVHPGLIMTNLFKH 208
             R+  +E   +I A  + PG++ T     
Sbjct: 200 GLRQELREAQTHIRATCISPGVVETQFAFK 229

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 89.5 bits (223), Expect = 3e-21
 Identities = 48/206 (23%), Positives = 68/206 (33%), Gaps = 37/206 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA G+G E AR      A V++A           + +             LD++     
Sbjct: 12  GGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDW 66

Query: 64  KDFAQNFIALNLPLNILINNAGI--MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +            ++ L+NNAGI         S +        N  G F+    ++  M 
Sbjct: 67  QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMK 126

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH----A 177
                    G IVN+SS A       G+         G +   +YG SK          A
Sbjct: 127 DAGG-----GSIVNISSAA-------GLM--------GLALTSSYGASKWGVRGLSKLAA 166

Query: 178 NELSRRFQEEGVNITANSVHPGLIMT 203
            EL          I  NSVHPG+  T
Sbjct: 167 VELGTD------RIRVNSVHPGMTYT 186

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 90.0 bits (224), Expect = 3e-21
 Identities = 55/207 (26%), Positives = 81/207 (39%), Gaps = 25/207 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIG  TA  LA     V    R      E    I       +   L+ D+S    +
Sbjct: 35  GAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEI--VGAGGQAIALEADVSDELQM 92

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           ++  ++ +     L+I++ NAGI   + P   +     +   A N  G FL  +L +  +
Sbjct: 93  RNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYL 152

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
               K+ G  G IV +SSI        G R         Y+  KA  Q  +   L A EL
Sbjct: 153 ----KQRG-GGAIVVVSSIN-------GTRTFTTPGATAYTATKA-AQVAIVQQL-ALEL 198

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFK 207
            +       +I  N+V PG I TN+  
Sbjct: 199 GKH------HIRVNAVCPGAIETNISD 219

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 89.1 bits (222), Expect = 3e-21
 Identities = 54/211 (25%), Positives = 80/211 (37%), Gaps = 35/211 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA-RVDTLKLDLSSIAS 62
           G A GIG   AR  A   A V++  R  A+  E    I         +  L L+ ++   
Sbjct: 21  GAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQ 80

Query: 63  IKDFAQNFIALNLPLNILINNAGIM--FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDT 119
            ++ A         L+ L++NA I+    P  Q+ ++        N    F+LT  LL  
Sbjct: 81  YRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPL 140

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK-----LANI 174
           + R+         I   SS   +   KG         RA +    AYG SK     L   
Sbjct: 141 LKRSED-----ASIAFTSSSVGR---KG---------RANWG---AYGVSKFATEGLMQT 180

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNL 205
           L A+EL          + ANS++PG   T +
Sbjct: 181 L-ADELEGVT-----AVRANSINPGATRTGM 205

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 89.5 bits (223), Expect = 3e-21
 Identities = 49/214 (22%), Positives = 69/214 (32%), Gaps = 34/214 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIG   A + A   A V++ ARN  A  E    I      A    L  D+   A  
Sbjct: 15  GASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAA--ALAGDVGDEALH 72

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +   +  +     L+   NNAG +        +S +G      TN    FL     +  +
Sbjct: 73  EALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAI 132

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL----H 176
                  G  G +   SS                   AG++    Y  SK   I      
Sbjct: 133 ----AALG-GGSLTFTSSFVGH--------------TAGFAGVAPYAASKAGLIGLVQAL 173

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA 210
           A EL  R       I  N++ PG   T     + 
Sbjct: 174 AVELGAR------GIRVNALLPGGTDTPANFANL 201

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 89.6 bits (223), Expect = 3e-21
 Identities = 47/211 (22%), Positives = 74/211 (35%), Gaps = 38/211 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIGL  AR LA   A++++               +    +  V     D++  + I
Sbjct: 32  GSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEI 91

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF-------ATNHIGHFLLTNLL 116
            D            +IL+NNAG+     Q  E   +          A N    F      
Sbjct: 92  ADMMAMVADRFGGADILVNNAGV-----QFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGA 146

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANI 174
           +  M    K+ G  GRI+N++S                  ++ Y   K    G +K    
Sbjct: 147 IPPM----KKKG-WGRIINIASAHGLVASPF---------KSAYVAAKHGIMGLTKTV-- 190

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNL 205
             A E++         +T NS+ PG ++T L
Sbjct: 191 --ALEVAES------GVTVNSICPGYVLTPL 213

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 89.1 bits (222), Expect = 4e-21
 Identities = 54/210 (25%), Positives = 77/210 (36%), Gaps = 37/210 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIG       A   A +   ARN    NE       +    +V     D S     
Sbjct: 21  GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW--QKKGFQVTGSVCDASLRPER 78

Query: 64  KDFAQNFIA-LNLPLNILINNAGIMFCPYQISEDGIEM---QF----ATNHIGHFLLTNL 115
           +   Q   +     L+ILINN G        S+  ++     F    +TN    + L+ L
Sbjct: 79  EKLMQTVSSMFGGKLDILINNLGA-----IRSKPTLDYTAEDFSFHISTNLESAYHLSQL 133

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
               +    K +G  G I+ +SSIA   +   G         + YS  K    ++LA  L
Sbjct: 134 AHPLL----KASG-CGNIIFMSSIAGVVSASVG---------SIYSATKG-ALNQLARNL 178

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTNL 205
            A E +         I AN+V P +I T L
Sbjct: 179 -ACEWASD------GIRANAVAPAVIATPL 201

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 88.7 bits (221), Expect = 4e-21
 Identities = 43/203 (21%), Positives = 71/203 (34%), Gaps = 29/203 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A+GIG   A   A   A V++       A      I       +   L+ +++     
Sbjct: 19  GAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAI--RQAGGKAIGLECNVTDEQHR 76

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
           +   +  +     + +L+NNAG     P+ +     E  F  N    F L+ L    M +
Sbjct: 77  EAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQK 136

Query: 123 TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHANEL 180
                   G I+N+SS+A + T             A Y   KA     ++      A ++
Sbjct: 137 AGG-----GAILNISSMAGENTNVR---------MASYGSSKAAVNHLTRNI----AFDV 178

Query: 181 SRRFQEEGVNITANSVHPGLIMT 203
                     I  N++ PG I T
Sbjct: 179 GPM------GIRVNAIAPGAIKT 195

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 88.3 bits (220), Expect = 5e-21
 Identities = 44/213 (20%), Positives = 74/213 (34%), Gaps = 36/213 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SG GL  A     R   V     +     E  +         +V  ++ D++    +
Sbjct: 9   GASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVADEGDV 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY-----QISEDGIEMQFATNHIGHFLLTNLLLD 118
                  +     +++L+NNAGI              +  +   A N  G FL    +L 
Sbjct: 68  NAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLP 127

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH-- 176
            M       G  G IVN++S+A        +          +  + AY  SK A +    
Sbjct: 128 HM----LLQG-AGVIVNIASVA-------SLV--------AFPGRSAYTTSKGAVLQLTK 167

Query: 177 --ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
             A + +         I  N+V PG+I T + +
Sbjct: 168 SVAVDYAGS------GIRCNAVCPGMIETPMTQ 194

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 88.3 bits (220), Expect = 6e-21
 Identities = 53/209 (25%), Positives = 82/209 (39%), Gaps = 35/209 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIG   A+  AL  + V+         N+  Q +        V  +K D+S    +
Sbjct: 14  GAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL--RGMGKEVLGVKADVSKKKDV 71

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           ++F +        +++L NNAGIM    P  ++S++  E   A N    F  +  ++  M
Sbjct: 72  EEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIM 131

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL----H 176
                + G +G IVN +SIA       GIR        G      Y  +K   I      
Sbjct: 132 ----LKQG-KGVIVNTASIA-------GIR--------GGFAGAPYTVAKHGLIGLTRSI 171

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNL 205
           A     +       I A +V PG + TN+
Sbjct: 172 AAHYGDQ------GIRAVAVLPGTVKTNI 194

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 88.8 bits (221), Expect = 7e-21
 Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 25/202 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG SGIG   A +      H +IA+R++     A + +       R   L +D+ +  ++
Sbjct: 34  GGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKL-AGATGRRCLPLSMDVRAPPAV 92

Query: 64  KDFAQNFIALNLPLNILINNAGIMF-CPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                  +     ++ILIN A   F CP   +S +  +     +  G F ++ +L +   
Sbjct: 93  MAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKF- 151

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              ++ G  G IVN+++         G   Q           KA     +   L A E  
Sbjct: 152 --FRDHG--GVIVNITATLGNR----GQALQ-----VHAGSAKA-AVDAMTRHL-AVEWG 196

Query: 182 RRFQEEGVNITANSVHPGLIMT 203
            +      NI  NS+ PG I  
Sbjct: 197 PQ------NIRVNSLAPGPISG 212

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 87.9 bits (219), Expect = 7e-21
 Identities = 45/206 (21%), Positives = 68/206 (33%), Gaps = 42/206 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
             A GIG   A   A   A VI    N +   E  +          + T  LD++    I
Sbjct: 13  AAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTRVLDVTKKKQI 65

Query: 64  KDFAQNFIALNLPLNILINNAGIMF--CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
             FA         L++L N AG +         E   +     N    +L+    L  M 
Sbjct: 66  DQFANEV----ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKML 121

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH----A 177
                    G I+N+SS+A        ++        G  ++  Y  +K A I      A
Sbjct: 122 AQKS-----GNIINMSSVA------SSVK--------GVVNRCVYSTTKAAVIGLTKSVA 162

Query: 178 NELSRRFQEEGVNITANSVHPGLIMT 203
            +  ++       I  N V PG + T
Sbjct: 163 ADFIQQ------GIRCNCVCPGTVDT 182

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 88.0 bits (219), Expect = 9e-21
 Identities = 51/211 (24%), Positives = 74/211 (35%), Gaps = 36/211 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG   A  LA   A V++A  N  AA    + I    D     ++ +D+S   S 
Sbjct: 16  GSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQI--VADGGTAISVAVDVSDPESA 73

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP-----YQISEDGIEMQFATNHIGHFLLTNLLLD 118
           K  A   +A    ++ L+NNA I           I  +  +   + N  G    T  +  
Sbjct: 74  KAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYK 133

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILH 176
            M +        G IVN SS A          +        Y   K    G ++      
Sbjct: 134 KMTKRGG-----GAIVNQSSTA-------AWLYS-----NYYGLAKVGINGLTQQL---- 172

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
           + EL  R      NI  N++ PG I T   +
Sbjct: 173 SRELGGR------NIRINAIAPGPIDTEANR 197

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 88.1 bits (219), Expect = 1e-20
 Identities = 41/232 (17%), Positives = 68/232 (29%), Gaps = 36/232 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GGA  IG   A  L  +   V++    +  AA      +            K DLS  +S
Sbjct: 18  GGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAEL-NAARAGSAVLCKGDLSLSSS 76

Query: 63  IKDFAQNFIALNL----PLNILINNAGIMF-------------CPYQISEDGIEMQFATN 105
           + D  ++ I  +       ++L+NNA   +                +  +  +   F +N
Sbjct: 77  LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSN 136

Query: 106 HIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA 165
            +    L                    +VNL          G            Y+  K 
Sbjct: 137 AVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGF---------CVYTMAKH 187

Query: 166 YGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK 217
                L     A EL+ R      +I  N+V PGL +            + +
Sbjct: 188 -ALGGLTRAA-ALELAPR------HIRVNAVAPGLSLLPPAMPQETQEEYRR 231

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 87.6 bits (218), Expect = 1e-20
 Identities = 49/207 (23%), Positives = 77/207 (37%), Gaps = 31/207 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   AR L    A V++ AR++       + I+     A       DLS   +I
Sbjct: 36  GASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAES--HACDLSHSDAI 93

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQI---SEDGIEMQFATNHIGHFLLTNLLLDTM 120
             FA   +A +   ++L+NNAG+ +    +        +   A N    +LL       M
Sbjct: 94  AAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAM 153

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHAN 178
               +     G I+N+SS+A +     G         A Y+  K    G    A    A 
Sbjct: 154 IAAKR-----GHIINISSLAGKNPVADG---------AAYTASKWGLNGLMTSA----AE 195

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNL 205
           EL +        +  + V PG + T  
Sbjct: 196 ELRQH------QVRVSLVAPGSVRTEF 216

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 87.6 bits (218), Expect = 1e-20
 Identities = 48/211 (22%), Positives = 81/211 (38%), Gaps = 37/211 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED-DTARVDTLKLDLSSIAS 62
           G + GIG E A   A   A VI+  RN     +    I +E     +   L L   +  +
Sbjct: 19  GASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSEN 78

Query: 63  IKDFAQNFIALNLPLNILINNAGIM--FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDT 119
            +  AQ        L+ +++NAG++   CP  + +    +     N    F+LT  LL  
Sbjct: 79  CQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPL 138

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK-----LANI 174
           + ++       G +V  SS   +   +G         RA +    AY  SK     +  +
Sbjct: 139 LLKSDA-----GSLVFTSSSVGR---QG---------RANWG---AYAASKFATEGMMQV 178

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNL 205
           L A+E  +        +  N ++PG   T +
Sbjct: 179 L-ADEYQQ-------RLRVNCINPGGTRTAM 201

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 87.6 bits (218), Expect = 1e-20
 Identities = 44/211 (20%), Positives = 74/211 (35%), Gaps = 34/211 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SG G   A+  A   A V+I  R+ A A      I           +  D+S  A +
Sbjct: 16  GAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADV 70

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
               +  ++    ++IL+NNAGI   P     +  +  +     N  G +L+T+ L+   
Sbjct: 71  DAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHF 130

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH---- 176
            +     G E  I+N++S           R           +   Y  +K   +      
Sbjct: 131 -KENGAKGQECVILNVASTG-------AGR--------PRPNLAWYNATKGWVVSVTKAL 174

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
           A EL+         I   +++P    T L  
Sbjct: 175 AIELAPA------KIRVVALNPVAGETPLLT 199

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 43/212 (20%), Positives = 80/212 (37%), Gaps = 38/212 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G   GIG   A  L  R A V++    +  AA E    +  +   A+   ++ D+S  + 
Sbjct: 28  GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL--KKLGAQGVAIQADISKPSE 85

Query: 63  IKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +       ++    L+ +++N+G+  +C   +++++  +  F  N  G F +    L   
Sbjct: 86  VVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHC 145

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK-----LANIL 175
            R        GRI+  SSIA   T               ++    Y  SK          
Sbjct: 146 RRG-------GRIILTSSIAAVMTG-----------IPNHA---LYAGSKAAVEGFCRAF 184

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
            A +   +       +T N + PG + T++F 
Sbjct: 185 -AVDCGAK------GVTVNCIAPGGVKTDMFD 209

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 52/211 (24%), Positives = 75/211 (35%), Gaps = 42/211 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SGIGL  AR LA R   V   AR+    + A   +        VD    D++S   +
Sbjct: 31  GVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL--RAAGHDVDGSSCDVTSTDEV 88

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF---------ATNHIGHFLLTN 114
                  +    P+ IL+N+AG        +  G               TN  G F +T 
Sbjct: 89  HAAVAAAVERFGPIGILVNSAG-------RNGGGETADLDDALWADVLDTNLTGVFRVTR 141

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
            +L             GRIVN++S   +               A Y+  K    G +K  
Sbjct: 142 EVLRAGGMREAGW---GRIVNIASTGGKQGVMYA---------APYTASKHGVVGFTKSV 189

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMT 203
                 EL++        IT N+V PG + T
Sbjct: 190 ----GFELAKT------GITVNAVCPGYVET 210

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 87.2 bits (217), Expect = 2e-20
 Identities = 53/211 (25%), Positives = 81/211 (38%), Gaps = 39/211 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIG   A  LA     V+I  A   AAA E    I  E    +  T + D+S  A+
Sbjct: 34  GASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKI--EAAGGKALTAQADVSDPAA 91

Query: 63  IKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           ++            +++L+NNAGIM      +  +   +   A N  G F         +
Sbjct: 92  VRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL 151

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK-----LANIL 175
                     GRI+N+S+         G+          Y     Y  +K     + ++L
Sbjct: 152 RVG-------GRIINMSTSQ------VGLLH------PSYG---IYAAAKAGVEAMTHVL 189

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTNLF 206
            + EL  R      +IT N+V PG   T+LF
Sbjct: 190 -SKELRGR------DITVNAVAPGPTATDLF 213

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 87.2 bits (217), Expect = 2e-20
 Identities = 49/208 (23%), Positives = 72/208 (34%), Gaps = 37/208 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA G+G    R +    A V+               +           + LD++  A  
Sbjct: 14  GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQW 68

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           K      +     L++L+NNAGI+        +    +     N  G FL    ++  M 
Sbjct: 69  KAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPM- 127

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH----A 177
              KE G  G I+N+SSI        G+         G      Y  +K A        A
Sbjct: 128 ---KEAG-RGSIINISSIE-------GLA--------GTVACHGYTATKFAVRGLTKSTA 168

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNL 205
            EL          I  NS+HPGL+ T +
Sbjct: 169 LELGPS------GIRVNSIHPGLVKTPM 190

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 86.9 bits (216), Expect = 2e-20
 Identities = 54/211 (25%), Positives = 82/211 (38%), Gaps = 38/211 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIGL  A  LA + A +++     AA  E  +  L      +V     DLS   ++
Sbjct: 11  GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAV 70

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF-------ATNHIGHFLLTNLL 116
           +    N +     ++IL+NNAGI     Q +    +          A N    F  T   
Sbjct: 71  RGLVDNAVRQMGRIDILVNNAGI-----QHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANI 174
           L  M    K+ G  GRI+N++S                  ++ Y   K    G +K+   
Sbjct: 126 LPHM----KKQG-FGRIINIASAHGLVASAN---------KSAYVAAKHGVVGFTKVT-- 169

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNL 205
             A E + +       ITAN++ PG + T L
Sbjct: 170 --ALETAGQ------GITANAICPGWVRTPL 192

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 85.7 bits (213), Expect = 3e-20
 Identities = 35/215 (16%), Positives = 58/215 (26%), Gaps = 41/215 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   G+G   AR  AL+   ++++ R   A  E                L  DL+     
Sbjct: 7   GATGGLGGAFAR--ALKGHDLLLSGRRAGALAELA-------REVGARALPADLADELEA 57

Query: 64  KDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           K   +       PL++L++  G        +   D +E   A +     L    +L    
Sbjct: 58  KALLEEAG----PLDLLVHAVGKAGRASVREAGRDLVEEMLAAH----LLTAAFVLKHA- 108

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              +      R V   +        G          A Y+  K              EL 
Sbjct: 109 ---RFQK-GARAVFFGAYPRYVQVPGF---------AAYAAAKG-ALEAYLEAARK-ELL 153

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFL 216
           R        +    V    + T L+       +  
Sbjct: 154 RE------GVHLVLVRLPAVATGLWAPLGGPPKGA 182

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 86.8 bits (216), Expect = 3e-20
 Identities = 54/207 (26%), Positives = 79/207 (38%), Gaps = 24/207 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG+ GIG    R+ A +   V +  A N  AA+     I   +       +  D+ + A 
Sbjct: 33  GGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAI--TESGGEAVAIPGDVGNAAD 90

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNLLLDT 119
           I             L+ L+NNAGI+  P    ++S + IE     N  G  L     +  
Sbjct: 91  IAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRR 150

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           M+R     G  G IVN+SS+A                   Y+  KA         L A E
Sbjct: 151 MSRLYSGQG--GAIVNVSSMAAILGSATQY--------VDYAASKA-AIDTFTIGL-ARE 198

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLF 206
           ++         I  N+V PG+I T+L 
Sbjct: 199 VAAE------GIRVNAVRPGIIETDLH 219

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 86.4 bits (215), Expect = 3e-20
 Identities = 43/213 (20%), Positives = 79/213 (37%), Gaps = 41/213 (19%)

Query: 4   GGASGIGLETARVLALRKAHVII---AARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           GG   +G  TA+  AL   ++++    A++   AN+ +  +  ED  A+V   + DLS+ 
Sbjct: 18  GGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDEL--EDQGAKVALYQSDLSNE 75

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLD 118
             +             ++I IN  G +   P  + SE   +     N+   +        
Sbjct: 76  EEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAK 135

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH-- 176
            MN         G I+ +++                     YS    Y  +K A + H  
Sbjct: 136 HMNP-------NGHIITIATSL------LAAYT------GFYS---TYAGNK-APVEHYT 172

Query: 177 ---ANELSRRFQEEGVNITANSVHPGLIMTNLF 206
              + EL ++       I+ N++ PG + T+ F
Sbjct: 173 RAASKELMKQ------QISVNAIAPGPMDTSFF 199

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 86.4 bits (215), Expect = 4e-20
 Identities = 45/206 (21%), Positives = 71/206 (34%), Gaps = 33/206 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG   A  L      V IA  N A A      I           +K+D+S    +
Sbjct: 9   GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEI--NQAGGHAVAVKVDVSDRDQV 66

Query: 64  KDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
               +         ++++NNAG+          I+ + ++  +  N  G        ++ 
Sbjct: 67  FAAVEQARKTLGGFDVIVNNAGVAPSTPIE--SITPEIVDKVYNINVKGVIWGIQAAVEA 124

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHA 177
                K+ G  G+I+N  S A       G         A YS  K    G ++ A    A
Sbjct: 125 F----KKEGHGGKIINACSQAGHV----GNPEL-----AVYSSSKFAVRGLTQTA----A 167

Query: 178 NELSRRFQEEGVNITANSVHPGLIMT 203
            +L+         IT N   PG++ T
Sbjct: 168 RDLAPL------GITVNGYCPGIVKT 187

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 86.4 bits (215), Expect = 4e-20
 Identities = 46/213 (21%), Positives = 78/213 (36%), Gaps = 45/213 (21%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+SGIGL     L    A V+  + +  +                 D  K+D+++   +
Sbjct: 21  GGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV------------SDHFKIDVTNEEEV 68

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           K+  +        ++IL+NNAGI  + P +    +        N  G +L+    +  M 
Sbjct: 69  KEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVM- 127

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH----A 177
                 G  G I+N++S+                      +  AY  SK A +      A
Sbjct: 128 ---LAIG-HGSIINIASVQ-------SYA--------ATKNAAAYVTSKHALLGLTRSVA 168

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFKHSA 210
            + +         I  N+V PG IMT +   +A
Sbjct: 169 IDYAP-------KIRCNAVCPGTIMTPMVIKAA 194

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 86.9 bits (216), Expect = 5e-20
 Identities = 39/202 (19%), Positives = 75/202 (37%), Gaps = 24/202 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG +G+G     +L+   A  +IA+R M       + I       +V  ++ D+     +
Sbjct: 33  GGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQI-SSQTGNKVHAIQCDVRDPDMV 91

Query: 64  KDFAQNFIALNLPLNILINNAGIMF-CPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           ++     I +    NI+INNA   F  P  ++S +  +        G   +T  +   + 
Sbjct: 92  QNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQL- 150

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
               +       +++++I  +     G  F         +  KA G   ++  L A E  
Sbjct: 151 ---IKAQKGAAFLSITTIYAET----GSGFV-----VPSASAKA-GVEAMSKSL-AAEWG 196

Query: 182 RRFQEEGVNITANSVHPGLIMT 203
           +        +  N + PG I T
Sbjct: 197 KY------GMRFNVIQPGPIKT 212

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 86.1 bits (214), Expect = 5e-20
 Identities = 45/206 (21%), Positives = 76/206 (36%), Gaps = 26/206 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIGL TAR+ A   A V +   +  A  +E    +    D         DL++  +
Sbjct: 14  GSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASM--RADGGDAAFFAADLATSEA 71

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDT 119
            +     F+A    +++LINNAG +       +I +   +     N     + T   L  
Sbjct: 72  CQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPH 131

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHA 177
           +   AK +G    +++  SIA    + GG           Y   KA  +   K       
Sbjct: 132 LAAAAKASGQTSAVISTGSIA---GHTGGGPGA-----GLYGAAKAFLHNVHKNW----V 179

Query: 178 NELSRRFQEEGVNITANSVHPGLIMT 203
           +  ++        +  N V PG + T
Sbjct: 180 DFHTKD------GVRFNIVSPGTVDT 199

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 86.1 bits (214), Expect = 5e-20
 Identities = 51/210 (24%), Positives = 83/210 (39%), Gaps = 37/210 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG SGIG  TA + A   A+V++A  N  AA      I      ++   +++D+SS    
Sbjct: 34  GGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDA 88

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +   +   A    +++L+NNAG         I E+  +   + N  G FL +  ++  M 
Sbjct: 89  ESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVM- 147

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH----A 177
              +  G  G I+N +S                      +D+ AY  SK A        A
Sbjct: 148 ---RRNG-GGSIINTTSYT-------ATS--------AIADRTAYVASKGAISSLTRAMA 188

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFK 207
            + ++        I  N+V PG I +  F 
Sbjct: 189 MDHAKE------GIRVNAVAPGTIDSPYFT 212

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 86.1 bits (214), Expect = 5e-20
 Identities = 53/211 (25%), Positives = 76/211 (36%), Gaps = 42/211 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIGLE AR L      V + AR         + +   +     D    D+ S+  I
Sbjct: 29  GATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL--REAGVEADGRTCDVRSVPEI 86

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ---------FATNHIGHFLLTN 114
           +      +    P+++L+NNAG           G   +           TN  G F +T 
Sbjct: 87  EALVAAVVERYGPVDVLVNNAG-------RPGGGATAELADELWLDVVETNLTGVFRVTK 139

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
            +L       + T   GRIVN++S   +               A YS  K    G +K  
Sbjct: 140 QVLKAGGMLERGT---GRIVNIASTGGKQGVVHA---------APYSASKHGVVGFTKAL 187

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMT 203
                 EL+R        IT N+V PG + T
Sbjct: 188 ----GLELART------GITVNAVCPGFVET 208

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 85.4 bits (212), Expect = 7e-20
 Identities = 34/207 (16%), Positives = 64/207 (30%), Gaps = 26/207 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G    IG E A+  A     V    RN          I  E    R+    LD  +   +
Sbjct: 14  GAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEI--EAAGGRIVARSLDARNEDEV 71

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
             F       + PL + I N G     P  + ++      +       F+        M 
Sbjct: 72  TAFLNA-ADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLML 130

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              +     G+I    + A        +R       +G++   A+  +K      A  ++
Sbjct: 131 AHGQ-----GKIFFTGATA-------SLR-----GGSGFA---AFASAKFGLRAVAQSMA 170

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
           R    + +++ A+ +    + T   + 
Sbjct: 171 RELMPKNIHV-AHLIIDSGVDTAWVRE 196

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 85.7 bits (213), Expect = 7e-20
 Identities = 45/208 (21%), Positives = 76/208 (36%), Gaps = 33/208 (15%)

Query: 5   GA-SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GA SGIG   AR  +     +++ AR        R   LK  +       ++D++   + 
Sbjct: 23  GASSGIGEAIARRFSEEGHPLLLLAR--------RVERLKALNLPNTLCAQVDVTDKYTF 74

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                    +  P + ++NNAG+M          +  +  F  N +G       +L  M 
Sbjct: 75  DTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPM- 133

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              K     G I+N+SSIA + T+            A Y   K          +HA   +
Sbjct: 134 ---KARN-CGTIINISSIAGKKTFPDH---------AAYCGTKFA--------VHAISEN 172

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHS 209
            R +    N+   ++ P  + T L  H+
Sbjct: 173 VREEVAASNVRVMTIAPSAVKTELLSHT 200

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 85.4 bits (212), Expect = 8e-20
 Identities = 27/203 (13%), Positives = 58/203 (28%), Gaps = 39/203 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+  +G E  +    +  + I          +               +  +  S    I
Sbjct: 29  GGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--------------SFTIKDSGEEEI 74

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM---QFATNHIGHFLLTNLLLDTM 120
           K   +   + ++ ++  +  AG        S++ ++        N    F   ++    +
Sbjct: 75  KSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLL 134

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
           N+        G  V   + A        +           S   AYG +K A      +L
Sbjct: 135 NQG-------GLFVLTGASA-------ALN--------RTSGMIAYGATKAATHHIIKDL 172

Query: 181 SRRFQEEGVNITANSVHPGLIMT 203
           +          T+  + P  + T
Sbjct: 173 ASENGGLPAGSTSLGILPVTLDT 195

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 86.2 bits (214), Expect = 9e-20
 Identities = 48/207 (23%), Positives = 77/207 (37%), Gaps = 32/207 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA---RVDTLKLDLSSI 60
           GGA+GIG    + L    ++V+IA+R +     A   +          RV  ++ ++ + 
Sbjct: 25  GGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE 84

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMF-CPY-QISEDGIEMQFATNHIGHFLLTNLLLD 118
             + +  ++ +     +N L+NN G  F  P   IS  G      TN  G F +   +  
Sbjct: 85  EEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS 144

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILH 176
           +     KE G  G IVN+         K G               +A  Y  +K      
Sbjct: 145 SW---MKEHG--GSIVNIIV-----PTKAGFPLA-----VHSGAARAGVYNLTKSL---- 185

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMT 203
           A E +         I  N V PG+I +
Sbjct: 186 ALEWACS------GIRINCVAPGVIYS 206

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 85.7 bits (213), Expect = 9e-20
 Identities = 44/206 (21%), Positives = 80/206 (38%), Gaps = 28/206 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G   GIG E A  L  R   VI+  A +  +A E    I  + + +    +K ++  +  
Sbjct: 36  GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI--KKNGSDAACVKANVGVVED 93

Query: 63  IKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           I    +  + +   L+I+ +N+G++ F     ++ +  +  F  N  G F +       +
Sbjct: 94  IVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL 153

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                     GR++ + SI  Q               A YS  K       A  + A ++
Sbjct: 154 EI-------GGRLILMGSITGQAKAVPKH--------AVYSGSKG-AIETFARCM-AIDM 196

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLF 206
           + +       IT N V PG I T+++
Sbjct: 197 ADK------KITVNVVAPGGIKTDMY 216

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 85.3 bits (212), Expect = 1e-19
 Identities = 48/211 (22%), Positives = 74/211 (35%), Gaps = 35/211 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G    IGL TA  LA     + +   N  A  +A   +   +      +   D++S  ++
Sbjct: 14  GAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASV--REKGVEARSYVCDVTSEEAV 71

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
                + +     ++ L NNAG    F P      D        N  G F +   +   M
Sbjct: 72  IGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQM 131

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL----H 176
                     GRIVN +S+A       G++        G  +  AYG SK A I      
Sbjct: 132 ----ITQN-YGRIVNTASMA-------GVK--------GPPNMAAYGTSKGAIIALTETA 171

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
           A +L+        NI  N++ PG +      
Sbjct: 172 ALDLAPY------NIRVNAISPGYMGPGFMW 196

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 84.9 bits (211), Expect = 1e-19
 Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 40/208 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ GIG   AR L    A V IA  ++ AA      +           +++D++  AS+
Sbjct: 19  GGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEVDVTKRASV 73

Query: 64  KDFAQNFIALNLPLNILINNAGI------MFCPYQISEDGIEMQFATNHIGHFLLTNLLL 117
               Q  I      ++L  NAG+      +     I+++  +  F  N  G FL   +  
Sbjct: 74  DAAMQKAIDALGGFDLLCANAGVSTMRPAV----DITDEEWDFNFDVNARGVFLANQIAC 129

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANIL 175
                    +  +G IVN +S+A +     G         A YS  K   +G ++     
Sbjct: 130 RHF----LASNTKGVIVNTASLAAKV----GAPLL-----AHYSASKFAVFGWTQAL--- 173

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMT 203
            A E++ +      NI  N V PG + T
Sbjct: 174 -AREMAPK------NIRVNCVCPGFVKT 194

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 84.9 bits (211), Expect = 1e-19
 Identities = 48/206 (23%), Positives = 75/206 (36%), Gaps = 36/206 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG   A       A V IA  ++  A +A   I           +++D++   SI
Sbjct: 15  GSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSI 69

Query: 64  KDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                  +     L+IL+NNA +    P  +I+ +  E  FA N  G           M 
Sbjct: 70  DAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQM- 128

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL----HA 177
                 G  G+I+N++S A       G R        G +    Y  +K A I       
Sbjct: 129 ---IAQGRGGKIINMASQA-------GRR--------GEALVAIYCATKAAVISLTQSAG 170

Query: 178 NELSRRFQEEGVNITANSVHPGLIMT 203
            +L +        I  N++ PG++  
Sbjct: 171 LDLIKH------RINVNAIAPGVVDG 190

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 84.9 bits (211), Expect = 2e-19
 Identities = 49/215 (22%), Positives = 77/215 (35%), Gaps = 45/215 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G ++GIG + A   A   A V +AAR+  A       I       +   ++ D++    +
Sbjct: 39  GASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEI--AGVGGKALPIRCDVTQPDQV 96

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ-------FATNHIGHFLLTNLL 116
           +            ++I + NAGI        +  ++M          TN  G FL     
Sbjct: 97  RGMLDQMTGELGGIDIAVCNAGI-----VSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAA 151

Query: 117 LDTMNRTAKETGIEGRIVNLSSI-AHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL 175
              M     + G+ G I+  +S+  H          Q++           Y  SK A ++
Sbjct: 152 ARAM----VDQGLGGTIITTASMSGHI-----INIPQQV---------SHYCTSK-AAVV 192

Query: 176 H-----ANELSRRFQEEGVNITANSVHPGLIMTNL 205
           H     A EL+         I  NSV PG I T L
Sbjct: 193 HLTKAMAVELAPH------QIRVNSVSPGYIRTEL 221

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 84.5 bits (210), Expect = 2e-19
 Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 40/210 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIG   A V A   A+V +A R+ A  +      L +  + +V  ++ D+S  A  
Sbjct: 17  GGTKGIGRGIATVFARAGANVAVAGRSTADIDACVAD-LDQLGSGKVIGVQTDVSDRAQC 75

Query: 64  KDFAQNFIALNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGHFLLTNL 115
              A   +     ++++  NAG+        M      + + +   FA N  G F     
Sbjct: 76  DALAGRAVEEFGGIDVVCANAGVFPDAPLATM------TPEQLNGIFAVNVNGTFYAVQA 129

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLAN 173
            LD +  +       GR+V  SSI    T   G         + Y   KA   G  + A 
Sbjct: 130 CLDALIASGS-----GRVVLTSSITGPITGYPG---W-----SHYGATKAAQLGFMRTA- 175

Query: 174 ILHANELSRRFQEEGVNITANSVHPGLIMT 203
              A EL+         IT N++ PG IMT
Sbjct: 176 ---AIELAPH------KITVNAIMPGNIMT 196

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 84.1 bits (209), Expect = 3e-19
 Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 25/205 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA  IGL     LA   A VIIA  + A A +A + +    +   V ++ +D+++  S+
Sbjct: 20  GGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDL--RMEGHDVSSVVMDVTNTESV 77

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQI---SEDGIEMQFATNHIGHFLLTNLLLDTM 120
           ++  ++       ++IL+  AGI     +    ++     Q   N  G F     +   M
Sbjct: 78  QNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIM 137

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                E   +G IV + S++       G+   +   +A Y+  KA G  +    L A E 
Sbjct: 138 ----LEQK-QGVIVAIGSMS-------GLIVNRPQQQAAYNASKA-GVHQYIRSL-AAEW 183

Query: 181 SRRFQEEGVNITANSVHPGLIMTNL 205
           +         I AN+V P  I T L
Sbjct: 184 APH------GIRANAVAPTYIETTL 202

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 84.1 bits (209), Expect = 3e-19
 Identities = 42/211 (19%), Positives = 66/211 (31%), Gaps = 42/211 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA GIG   A+  A   A V +          A  +             ++DL      
Sbjct: 13  GGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI--------GGAFFQVDLEDERER 64

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
             F +        +++L+NNA I        +           N      L+ L    M 
Sbjct: 65  VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR 124

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH----- 176
           +        G IVN++S+        G+            +  AY  SK   +++     
Sbjct: 125 KVGG-----GAIVNVASVQ-------GLF--------AEQENAAYNASK-GGLVNLTRSL 163

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
           A +L+         I  N+V PG I T    
Sbjct: 164 ALDLAPL------RIRVNAVAPGAIATEAVL 188

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 84.2 bits (209), Expect = 3e-19
 Identities = 40/220 (18%), Positives = 63/220 (28%), Gaps = 41/220 (18%)

Query: 4   GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G +  +GL  A  L      VII      A+  E RQ        A    L  D S    
Sbjct: 34  GASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ--------AGAVALYGDFSCETG 85

Query: 63  IKDFAQNFIALNLPLNILINNAGIMF-CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           I  F          L  +++NA            D     F+ + +  +L+       + 
Sbjct: 86  IMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLT 145

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI----LHA 177
            +         IV++S      T KG          + +    AY  +K          A
Sbjct: 146 ASEV-----ADIVHISDDV---TRKGS---------SKHI---AYCATKAGLESLTLSFA 185

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK 217
              +         +  N + P L+M      +A     L 
Sbjct: 186 ARFAPL-------VKVNGIAPALLMFQPKDDAAYRANALA 218

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 82.7 bits (205), Expect = 3e-19
 Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 51/204 (25%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +  +G      L  +KA VI A R                       + +D+++I SI
Sbjct: 10  GASGTLGSAVKERLE-KKAEVITAGR-------------------HSGDVTVDITNIDSI 49

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           K   +        ++ +++  G   F P  +++ +   +  ++   G   L  L +D++N
Sbjct: 50  KKMYEQVG----KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLN 105

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                   +G     + I  +     G         A  +       +  A    A E+ 
Sbjct: 106 D-------KGSFTLTTGIMMEDPIVQG---------ASAAMANG-AVTAFAKSA-AIEMP 147

Query: 182 RRFQEEGVNITANSVHPGLIMTNL 205
           R        I  N+V P ++  + 
Sbjct: 148 R-------GIRINTVSPNVLEESW 164

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 84.2 bits (209), Expect = 3e-19
 Identities = 42/210 (20%), Positives = 69/210 (32%), Gaps = 32/210 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SG+G   A  LA     V +A R + A  E    I           +  D++   S+
Sbjct: 35  GAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSV 89

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +      +     +++L NNAG          ++    +    TN  G FL T      M
Sbjct: 90  RALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVM 149

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHAN 178
            +  +  G  GRI+N  SI+                 A Y+  K    G +K      + 
Sbjct: 150 -KAQEPRG--GRIINNGSISATSPRPY---------SAPYTATKHAITGLTKST----SL 193

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           +          +I    +  G   T + + 
Sbjct: 194 DGRVH------DIACGQIDIGNADTPMAQK 217

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 83.4 bits (207), Expect = 4e-19
 Identities = 53/213 (24%), Positives = 78/213 (36%), Gaps = 46/213 (21%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIGL  A+VLA   A++++      A   A           +      DLS +A I
Sbjct: 11  GSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEI----ARHGVKAVHHPADLSDVAQI 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF---------ATNHIGHFLLTN 114
           +            ++IL+NNAG       I       QF         A N    F  T 
Sbjct: 67  EALFALAEREFGGVDILVNNAG-------IQHVAPVEQFPLESWDKIIALNLSAVFHGTR 119

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
           L L  M    +     GRI+N++S+       G         +A Y   K    G +K+ 
Sbjct: 120 LALPGM----RARN-WGRIINIASVHGLVGSTG---------KAAYVAAKHGVVGLTKVV 165

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMTNL 205
                 E +        N+T N++ PG ++T L
Sbjct: 166 ----GLETATS------NVTCNAICPGWVLTPL 188

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 83.9 bits (208), Expect = 4e-19
 Identities = 44/215 (20%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA G+G  T R L      V+IA             +       R + +  +++S  S+
Sbjct: 37  GGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSV 91

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM---QF----ATNHIGHFLLTNLL 116
               +    L      ++ + G       +  DG       F         G + +  L+
Sbjct: 92  LAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLV 151

Query: 117 LDTMNRT-AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLAN 173
             ++     +E G  G +V  +SIA    Y+G I       +  Y+  KA   G +  A 
Sbjct: 152 AASIAAAEPRENGERGALVLTASIA---GYEGQI------GQTAYAAAKAGVIGLTIAA- 201

Query: 174 ILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
              A +LS         I  N++ PG + T + + 
Sbjct: 202 ---ARDLSSA------GIRVNTIAPGTMKTPIMES 227

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 83.0 bits (206), Expect = 4e-19
 Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 37/216 (17%)

Query: 4   GGASGIGLETARVLALRKAH-------VIIAARNMAAANEARQLILKEDDTARVDTLKLD 56
           G   GIG   A   A    H       +++++R  A   +         + A  DT+  D
Sbjct: 9   GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC--RAEGALTDTITAD 66

Query: 57  LSSIASIKDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTN 114
           +S +A ++    + +     ++ L+NNAG+  F     ++E+  +    TN  G F LT 
Sbjct: 67  ISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQ 126

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
            L   M R        G I  ++S+A    ++           + Y   K    G  +  
Sbjct: 127 ALFALMERQHS-----GHIFFITSVAATKAFRHS---------SIYCMSKFGQRGLVETM 172

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
                    +       N+    V PG + T ++  
Sbjct: 173 ----RLYARKC------NVRITDVQPGAVYTPMWGK 198

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 83.7 bits (208), Expect = 5e-19
 Identities = 55/214 (25%), Positives = 81/214 (37%), Gaps = 39/214 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  +GIGL  AR LA    HV+ A  +  AA+ A   I            ++D+S    I
Sbjct: 36  GAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQI 90

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                  +A    ++ L+ NAG++        + +  +   A N  G +L T      M 
Sbjct: 91  IAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRM- 149

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH----- 176
               E G  G IVNLSS+A       G                AYG SK A I+      
Sbjct: 150 ---IERG-GGAIVNLSSLA-------GQV--------AVGGTGAYGMSK-AGIIQLSRIT 189

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA 210
           A EL          I +N++ P  + T + + + 
Sbjct: 190 AAELRSS------GIRSNTLLPAFVDTPMQQTAM 217

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 83.3 bits (207), Expect = 5e-19
 Identities = 49/212 (23%), Positives = 74/212 (34%), Gaps = 39/212 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIGLET+RVLA   A V++A         A   +             +DL++  S+
Sbjct: 18  GACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSV 72

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY----QISEDGIEMQFATNHIGHFLLTNLLLDT 119
           +      I     L+I+ NNA           Q++ D  +  F  N  G  L+    +  
Sbjct: 73  RALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPR 132

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH--- 176
           +       G  G IVN+SS                     Y    AY  +K A       
Sbjct: 133 L----ISAG-GGAIVNISSAT-------AHA--------AYDMSTAYACTKAAIETLTRY 172

Query: 177 -ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
            A +  R        +  N++ PGL+ T   +
Sbjct: 173 VATQYGRH------GVRCNAIAPGLVRTPRLE 198

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 83.0 bits (206), Expect = 6e-19
 Identities = 44/211 (20%), Positives = 76/211 (36%), Gaps = 38/211 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G   GIG   A  L    A V++  A +   A +    I  +   +    +K D+  +  
Sbjct: 25  GSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI--KALGSDAIAIKADIRQVPE 82

Query: 63  IKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           I       +A    L+I ++N+G++ F     ++E+  +  F+ N  G F +       +
Sbjct: 83  IVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL 142

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK-----LANIL 175
                     GRIV  SS   +                 +S    Y  SK        I 
Sbjct: 143 TE-------GGRIVLTSSNTSKDF-----------SVPKHS---LYSGSKGAVDSFVRIF 181

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMTNLF 206
            + +   +       IT N+V PG  +T++F
Sbjct: 182 -SKDCGDK------KITVNAVAPGGTVTDMF 205

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 83.0 bits (206), Expect = 6e-19
 Identities = 40/211 (18%), Positives = 72/211 (34%), Gaps = 41/211 (19%)

Query: 4   GGA-SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
             A +GIG  TAR   L  A V+I+  +     E R  +  +    RV+ +  D++S  +
Sbjct: 29  AAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQL-ADLGLGRVEAVVCDVTSTEA 87

Query: 63  IKDFAQNFIALNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGHFLLTN 114
           +       +     L++L+NNAG+        M      +++  +             T 
Sbjct: 88  VDALITQTVEKAGRLDVLVNNAGLGGQTPVVDM------TDEEWDRVLNVTLTSVMRATR 141

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
             L       +     G IVN +S+            Q     + Y+  KA     ++ +
Sbjct: 142 AALRYF----RGVDHGGVIVNNASVLGWR----AQHSQ-----SHYAAAKAGVMALTRCS 188

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMT 203
               A E           +  N+V P +   
Sbjct: 189 ----AIEAVEF------GVRINAVSPSIARH 209

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 82.5 bits (205), Expect = 8e-19
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 36/206 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA+GIG   A   A+  A + IA      A EA   I   +   RV T+K D+S    +
Sbjct: 14  GGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAI--RNLGRRVLTVKCDVSQPGDV 69

Query: 64  KDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
           + F +  I+     +IL+NNAGI     F   +++ +  +  F  N    FL+    +  
Sbjct: 70  EAFGKQVISTFGRCDILVNNAGIYPLIPF--DELTFEQWKKTFEINVDSGFLMAKAFVPG 127

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHA 177
           M R        GRI+NL+S  +       I          Y   KA   G ++      A
Sbjct: 128 MKRNGW-----GRIINLTSTTYWL----KIEAY-----THYISTKAANIGFTRAL----A 169

Query: 178 NELSRRFQEEGVNITANSVHPGLIMT 203
           ++L +        IT N++ P L+ T
Sbjct: 170 SDLGKD------GITVNAIAPSLVRT 189

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 83.0 bits (206), Expect = 1e-18
 Identities = 46/207 (22%), Positives = 72/207 (34%), Gaps = 30/207 (14%)

Query: 4   GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG  GIGL  AR LA     + I    +          +      ARV  L+ DL+ ++S
Sbjct: 36  GGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAEL--SGLGARVIFLRADLADLSS 93

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPY----QISEDGIEMQFATNHIGHFLLTNLLLD 118
            +      +A    ++ L+NNAGI          +  +  +     N  G    T  +L 
Sbjct: 94  HQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLK 153

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILH 176
            M  +         I+N++S++   T            R  Y   KA     S+      
Sbjct: 154 AMLASDARAS--RSIINITSVSAVMTSPE---------RLDYCMSKAGLAAFSQGL---- 198

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMT 203
           A  L+         I    V PG+I +
Sbjct: 199 ALRLAET------GIAVFEVRPGIIRS 219

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 82.7 bits (205), Expect = 1e-18
 Identities = 47/222 (21%), Positives = 73/222 (32%), Gaps = 44/222 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASG+G           A V +  ++     E                +  D+ S+   
Sbjct: 12  GGASGLGRALVDRFVAEGARVAVLDKSAERLRELE-----VAHGGNAVGVVGDVRSLQDQ 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQF----ATNHIGHFLLTNLL 116
           K  A+  +A    ++ LI NAGI         + ED I+  F      N  G+       
Sbjct: 67  KRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKAC 126

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL- 175
           L  +      +   G +V   S A  Y   GG                 Y  +K A +  
Sbjct: 127 LPAL----VSSR--GSVVFTISNAGFYPNGGGP---------------LYTATKHAVVGL 165

Query: 176 ---HANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR 214
               A EL+         +  N V PG + T+L   S++ + 
Sbjct: 166 VRQMAFELAPH-------VRVNGVAPGGMNTDLRGPSSLGLS 200

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 82.0 bits (203), Expect = 1e-18
 Identities = 35/218 (16%), Positives = 62/218 (28%), Gaps = 53/218 (24%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A+GIG  T +VL      ++      A                    +  DLS+    
Sbjct: 8   GCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGR 48

Query: 64  KDFAQNFIALNL-PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
           K    + +A     ++ L+  AG+           +    + N+ G   L +  L  + +
Sbjct: 49  KQAIADVLAKCSKGMDGLVLCAGLG-----PQTKVLGNVVSVNYFGATELMDAFLPALKK 103

Query: 123 TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR-------------AGYSDKKAYGQS 169
             +        V +SS+A  +            +                     AY  S
Sbjct: 104 GHQ-----PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158

Query: 170 KLANIL----HANELSRRFQEEGVNITANSVHPGLIMT 203
           K A  +     A             +  N++ PG   T
Sbjct: 159 KNALTVAVRKRAAAWGEA------GVRLNTIAPGATET 190

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 81.8 bits (203), Expect = 1e-18
 Identities = 47/215 (21%), Positives = 81/215 (37%), Gaps = 49/215 (22%)

Query: 4   GGASGIGLETARVLALRKAHVIIA--ARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           GGA GIG   +  LA     + +A   +    A E  +LI  E    +   + LD++  A
Sbjct: 9   GGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLI--EAADQKAVFVGLDVTDKA 66

Query: 62  SIKDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTNLLL 117
           +               ++L+NNAGI         +++E+ ++  ++ N    F       
Sbjct: 67  NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLL--EVTEEDLKQIYSVNVFSVFFGIQAAS 124

Query: 118 DTMNRTAKETGIEGRIVNLSSIA------HQYTY---KGGIRFQKINDRAGYSDKKAYGQ 168
                   E G++G+I+N +SIA          Y   K  +R                G 
Sbjct: 125 RKF----DELGVKGKIINAASIAAIQGFPILSAYSTTKFAVR----------------GL 164

Query: 169 SKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           ++ A    A EL+ +        T N+  PG++ T
Sbjct: 165 TQAA----AQELAPK------GHTVNAYAPGIVGT 189

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 82.3 bits (204), Expect = 1e-18
 Identities = 45/210 (21%), Positives = 70/210 (33%), Gaps = 28/210 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG +G+G   A+ L+     V+I  R     + A   I        V  +  D+     +
Sbjct: 40  GGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEI-GGRTGNIVRAVVCDVGDPDQV 98

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQI---SEDGIEMQFATNHIGHFLLTNLLLDTM 120
                   A    L++L+NNAG    P  +   + +      A N  G FL T      M
Sbjct: 99  AALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMM 158

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHAN 178
                +T   GRI+N  SI+ Q               A Y+  K    G +K      A 
Sbjct: 159 ---KAQTPRGGRIINNGSISAQTPRPN---------SAPYTATKHAITGLTKST----AL 202

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           +          +I    +  G   T++   
Sbjct: 203 DGRMH------DIACGQIDIGNAATDMTAR 226

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 81.4 bits (202), Expect = 2e-18
 Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 44/212 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G ++G+G   A   A  KA V++        AN   + I  +        +K D++  + 
Sbjct: 14  GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI--KKVGGEAIAVKGDVTVESD 71

Query: 63  IKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           + +  Q+ I     L+++INNAG+       ++S         TN  G FL +   +   
Sbjct: 72  VINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYF 131

Query: 121 NRTAKETGIEGRIVNLSSI------AHQYTY---KGGIRFQKINDRAGYSDKKAYGQSKL 171
                E  I+G ++N+SS+           Y   KGG++                  ++ 
Sbjct: 132 ----VENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMK----------------LMTET 171

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMT 203
                A E + +       I  N++ PG I T
Sbjct: 172 L----ALEYAPK------GIRVNNIGPGAINT 193

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 81.4 bits (202), Expect = 2e-18
 Identities = 50/212 (23%), Positives = 76/212 (35%), Gaps = 35/212 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + G+G   A  LA    +++I  AR+  AA E  + I  E    +V  +K ++   A 
Sbjct: 11  GSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEI--EKLGVKVLVVKANVGQPAK 68

Query: 63  IKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           IK+  Q        L++ +NNA      P  ++ E   +     N              M
Sbjct: 69  IKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLM 128

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANIL----H 176
            +        G IV++SS+                    Y+     G SK A        
Sbjct: 129 EKNGG-----GHIVSISSLG------SIRYL------ENYT---TVGVSKAALEALTRYL 168

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           A ELS +       I  N+V  G I T+  KH
Sbjct: 169 AVELSPK------QIIVNAVSGGAIDTDALKH 194

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 81.9 bits (203), Expect = 3e-18
 Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 40/210 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIG   A V A   A+V +AAR+    +      L E     V  ++LD+S   S 
Sbjct: 48  GGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAE-LGELGAGNVIGVRLDVSDPGSC 106

Query: 64  KDFAQNFIALNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGHFLLTNL 115
            D A+  +     L+++  NAGI        M      + + +      N  G       
Sbjct: 107 ADAARTVVDAFGALDVVCANAGIFPEARLDTM------TPEQLSEVLDVNVKGTVYTVQA 160

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLAN 173
            L  +  + +     GR++  SSI    T   G         + Y   KA   G  + A 
Sbjct: 161 CLAPLTASGR-----GRVILTSSITGPVTGYPG---W-----SHYGASKAAQLGFMRTA- 206

Query: 174 ILHANELSRRFQEEGVNITANSVHPGLIMT 203
              A EL+ R       +T N++ PG I+T
Sbjct: 207 ---AIELAPR------GVTVNAILPGNILT 227

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 81.0 bits (201), Expect = 3e-18
 Identities = 40/211 (18%), Positives = 68/211 (32%), Gaps = 50/211 (23%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G ASGIG     + A   A ++   R      EA   +      A    +  D+S   ++
Sbjct: 13  GAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAV 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ---------FATNHIGHFLLTN 114
           +      +     L+ + + AG       ++   +               N  G FL+  
Sbjct: 68  EAVFAEALEEFGRLHGVAHFAG-------VAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 120

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
              + +          G +V   S+A       G         A Y+  K    G ++  
Sbjct: 121 KAGEVLEEG-------GSLVLTGSVAGL-----GAFGL-----AHYAAGKLGVVGLARTL 163

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMT 203
               A EL+R+       +  N + PGLI T
Sbjct: 164 ----ALELARK------GVRVNVLLPGLIQT 184

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 81.0 bits (201), Expect = 3e-18
 Identities = 49/221 (22%), Positives = 71/221 (32%), Gaps = 33/221 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G    IG   A   A   A+V++        A  A   I  E        +K DL++ A 
Sbjct: 15  GAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEI--EKLGRSALAIKADLTNAAE 72

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNLLLDT 119
           ++            ++ L++ AG +       ++ E         N    FL     L  
Sbjct: 73  VEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPK 132

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           M +        G IV  SS A      GG          G      Y  SK A +     
Sbjct: 133 MAKG-------GAIVTFSSQA---GRDGGG--------PGALA---YATSKGAVMTFTRG 171

Query: 180 LSRRFQEEGVNITANSVHPGLI---MTNLFKHSAVVMRFLK 217
           L++   E G  I  N+V PG+I     + F    V  R   
Sbjct: 172 LAK---EVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAG 209

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 80.4 bits (199), Expect = 5e-18
 Identities = 44/211 (20%), Positives = 68/211 (32%), Gaps = 35/211 (16%)

Query: 3   AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
            G + GIG   A  L    A V I  R++       Q    +    +   +  D S  + 
Sbjct: 11  TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEA--QSLGGQCVPVVCDSSQESE 68

Query: 63  IKD-FAQNFIALNLPLNILINNAGIMFCPYQISEDG--IEM-------QFATNHIGHFLL 112
           ++  F Q        L++L+NNA         + +    E               GH+  
Sbjct: 69  VRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFC 128

Query: 113 TNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLA 172
           +      M    +     G IV +SS            F        Y   KA    KLA
Sbjct: 129 SVYGARLMVPAGQ-----GLIVVISSPGSL-----QYMFN-----VPYGVGKA-ACDKLA 172

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMT 203
               A+EL R        ++  S+ PG++ T
Sbjct: 173 ADC-AHELRRH------GVSCVSLWPGIVQT 196

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 80.7 bits (200), Expect = 5e-18
 Identities = 48/214 (22%), Positives = 73/214 (34%), Gaps = 37/214 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIA------------ARNMAAANEARQLILKEDDTARVD 51
           G A G G   A  LA   A +I                         +L+  ED  +R+ 
Sbjct: 20  GAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV--EDIGSRIV 77

Query: 52  TLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFL 111
             + D+    S+    Q  +     L+I++ NAGI   P    +DG       N  G + 
Sbjct: 78  ARQADVRDRESLSAALQAGLDELGRLDIVVANAGI--APMSAGDDGWHDVIDVNLTGVYH 135

Query: 112 LTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQS 169
              + + T+     + G  G IV +SS A                  GY   K    G  
Sbjct: 136 TIKVAIPTL----VKQGTGGSIVLISSSAGLAGVGSADPGS-----VGYVAAKHGVVGLM 186

Query: 170 KLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           ++     AN L+ +       I  NS+HP  + T
Sbjct: 187 RVY----ANLLAGQ------MIRVNSIHPSGVET 210

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 80.3 bits (199), Expect = 6e-18
 Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 47/217 (21%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI-----LKEDDTARVDTLKLDLS 58
           G  SGIG   +  LA   A V     + AAA E  +L+      +          + D+S
Sbjct: 14  GAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVS 73

Query: 59  SIASIKDFAQNFIA-LNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIG 108
              + +   +   A  + P +++++ AG       I++D   +      +    A N  G
Sbjct: 74  EARAARCLLEQVQACFSRPPSVVVSCAG-------ITQDEFLLHMSEDDWDKVIAVNLKG 126

Query: 109 HFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--Y 166
            FL+T      +          G I+N+SSI  +    G    Q       Y+  KA   
Sbjct: 127 TFLVTQAAAQALVSNGC----RGSIINISSIVGKVGNVG----Q-----TNYAASKAGVI 173

Query: 167 GQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           G ++ A    A EL R        I  NSV PG I T
Sbjct: 174 GLTQTA----ARELGRH------GIRCNSVLPGFIAT 200

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 81.3 bits (201), Expect = 6e-18
 Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 10/142 (7%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE---DDTARVDTLKLDLSSI 60
           G +SG G  TA  LA     V  + R++   N +    +     D+   + TL+LD+ S 
Sbjct: 12  GASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQ 71

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLD 118
            S+       I  +  +++LI+NAG M F P    + +     +  N +    +    L 
Sbjct: 72  VSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALP 131

Query: 119 TMNRTAKETGIEGRIVNLSSIA 140
            M R  K     G ++ +SS +
Sbjct: 132 HM-RRQK----HGLLIWISSSS 148

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 80.3 bits (199), Expect = 7e-18
 Identities = 40/210 (19%), Positives = 71/210 (33%), Gaps = 46/210 (21%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   A       + VI  + +                 A+ D ++ D+++   +
Sbjct: 15  GASMGIGRAIAERFVDEGSKVIDLSIHDPGE-------------AKYDHIECDVTNPDQV 61

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           K    +       +++L+NNAGI  +     +S          N  G++  +   +  M 
Sbjct: 62  KASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMI 121

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH----A 177
           R+         IVN+SS+                      +  AY  SK A I      A
Sbjct: 122 RSRD-----PSIVNISSVQ-------ASI--------ITKNASAYVTSKHAVIGLTKSIA 161

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFK 207
            + +         +  N+V P  I T L +
Sbjct: 162 LDYAPL-------LRCNAVCPATIDTPLVR 184

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 79.9 bits (198), Expect = 8e-18
 Identities = 40/211 (18%), Positives = 65/211 (30%), Gaps = 47/211 (22%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG      L    A V +A R +A                    L  DL   A  
Sbjct: 35  GAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-------------HLPGDLREAAYA 81

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                   A    L+I++NNAG++      + ++    +    N    F +    +  M 
Sbjct: 82  DGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMA 141

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH----- 176
                    G IVN++S         G+R               Y  +K A +       
Sbjct: 142 AAGG-----GAIVNVASCW-------GLR--------PGPGHALYCLTK-AALASLTQCM 180

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
             + + +       I  N+V P  + T + +
Sbjct: 181 GMDHAPQ------GIRINAVCPNEVNTPMLR 205

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 79.9 bits (198), Expect = 8e-18
 Identities = 51/206 (24%), Positives = 76/206 (36%), Gaps = 28/206 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG+ GIG   A+ LAL  A V +        A      I  E    R   ++ D     +
Sbjct: 38  GGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI--EQAGGRAVAIRADNRDAEA 95

Query: 63  IKDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           I+   +  +     L+IL+N+AGI    P  + +    +   A N    F+        +
Sbjct: 96  IEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHL 155

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                     GRI+ + S   +     GI        + YS  KA   + L   L A +L
Sbjct: 156 GD-------GGRIITIGSNLAELVPWPGI--------SLYSASKA-ALAGLTKGL-ARDL 198

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLF 206
             R       IT N VHPG   T++ 
Sbjct: 199 GPR------GITVNIVHPGSTDTDMN 218

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 79.5 bits (197), Expect = 1e-17
 Identities = 38/208 (18%), Positives = 73/208 (35%), Gaps = 45/208 (21%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG    R    R   V+  +R++  + +             + T+  D+S   + 
Sbjct: 35  GASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----------PDIHTVAGDISKPETA 83

Query: 64  KDFAQNFIALNLPLNILINNAGI------MFCPYQISEDGIEMQFATNHIGHFLLTNLLL 117
               +  I     ++ L+NNAG+      +    +++++  +     N  G F +T    
Sbjct: 84  DRIVREGIERFGRIDSLVNNAGVFLAKPFV----EMTQEDYDHNLGVNVAGFFHITQRAA 139

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANIL 175
             M +        G IV++++           +       A  S  K      ++     
Sbjct: 140 AEMLKQGS-----GHIVSITTSL-------VDQPMVGMPSALASLTKGGLNAVTRSL--- 184

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMT 203
            A E SR        +  N+V PG+I T
Sbjct: 185 -AMEFSRS------GVRVNAVSPGVIKT 205

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 79.5 bits (197), Expect = 1e-17
 Identities = 43/214 (20%), Positives = 73/214 (34%), Gaps = 44/214 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ G+G   A+ LA     V++A+RN+  A+EA Q +  E         + D+S+   +
Sbjct: 28  GGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLT-EKYGVETMAFRCDVSNYEEV 86

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ-------FATNHIGHFLLTNLL 116
           K   +        L+ ++N AGI            E            N  G + +    
Sbjct: 87  KKLLEAVKEKFGKLDTVVNAAGI-----NRRHPAEEFPLDEFRQVIEVNLFGTYYVCREA 141

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              +    +E+     I+N+ S+      +  +               AY  SK   +  
Sbjct: 142 FSLL----RESD-NPSIINIGSLT---VEEVTMPNI-----------SAYAASK-GGVAS 181

Query: 177 -----ANELSRRFQEEGVNITANSVHPGLIMTNL 205
                A E  R        I  N + PG   T +
Sbjct: 182 LTKALAKEWGRY------GIRVNVIAPGWYRTKM 209

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 79.2 bits (196), Expect = 1e-17
 Identities = 49/214 (22%), Positives = 73/214 (34%), Gaps = 33/214 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SG+G    R+LA   A V+       A  E    +      A V     D+++ A  
Sbjct: 14  GASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADA 68

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDG------IEMQFATNHIGHFLLTNLLL 117
                        ++ L+N AG       +   G           A N IG F +  L  
Sbjct: 69  TAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAA 128

Query: 118 DTMNRT-AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANI 174
           + M++      G  G IVN +SIA      G    Q     A Y+  K      +  A  
Sbjct: 129 EVMSQGEPDADGERGVIVNTASIAAFDGQIG----Q-----AAYAASKGGVAALTLPA-- 177

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
             A EL+R        I   ++ PG+  T +   
Sbjct: 178 --ARELARF------GIRVVTIAPGIFDTPMMAG 203

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 79.1 bits (196), Expect = 2e-17
 Identities = 49/204 (24%), Positives = 80/204 (39%), Gaps = 28/204 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIG   A   A   AHV+   R      E    I   D     + +  DL+ +   
Sbjct: 38  GAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEI--ADGGGSAEAVVADLADLEGA 94

Query: 64  KDFAQNFIALNLPLNILINNAGIMF-CP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
            + A+   A    +++L+NNAGI+   P  ++S          N    ++L+      M 
Sbjct: 95  ANVAEELAATR-RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAM- 152

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                 G  GRIV ++S+    +++GG         A Y+  K      L   L A+E +
Sbjct: 153 ---LAHG-SGRIVTIASML---SFQGGRN------VAAYAASKH-AVVGLTRAL-ASEWA 197

Query: 182 RRFQEEGVNITANSVHPGLIMTNL 205
            R       +  N++ PG ++T  
Sbjct: 198 GR------GVGVNALAPGYVVTAN 215

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 78.7 bits (195), Expect = 2e-17
 Identities = 51/214 (23%), Positives = 77/214 (35%), Gaps = 47/214 (21%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIGLE  R  A   A +I+  R  AA + A Q +      A    +  D++   ++
Sbjct: 18  GAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA----AVAARIVADVTDAEAM 73

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ-------FATNHIGHFLLTNLL 116
              A    A+  P++IL+N+AGI         D +E          A N  G F  +   
Sbjct: 74  TAAAAEAEAVA-PVSILVNSAGI-----ARLHDALETDDATWRQVMAVNVDGMFWASRAF 127

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              M       G  G IVNL S++                        +Y  SK   +  
Sbjct: 128 GRAM----VARG-AGAIVNLGSMS---GTIVNRPQFAS----------SYMASK-GAVHQ 168

Query: 177 -----ANELSRRFQEEGVNITANSVHPGLIMTNL 205
                A E + R       +  N++ PG + T +
Sbjct: 169 LTRALAAEWAGR------GVRVNALAPGYVATEM 196

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 78.8 bits (195), Expect = 3e-17
 Identities = 41/230 (17%), Positives = 74/230 (32%), Gaps = 39/230 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIA------------ARNMAAANEARQLILKEDDTARVD 51
           GGA G G   A  LA   A +I+                     EA   +  E    +  
Sbjct: 17  GGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV--EKTGRKAY 74

Query: 52  TLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFL 111
           T ++D+   A++     N +A    L++++ NAGI      +        F  + +G   
Sbjct: 75  TAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVIN 134

Query: 112 LTNLLLDTMNRTAKETGIE-GRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK 170
             +  L  +             I+   S+A                         Y  +K
Sbjct: 135 TVHAALPYL--------TSGASIITTGSVAGLI----AAAQPPGAGGPQGPGGAGYSYAK 182

Query: 171 -----LANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF 215
                    L A +L+ +      +I AN +HP  + T++   + +  +F
Sbjct: 183 QLVDSYTLQL-AAQLAPQ------SIRANVIHPTNVNTDMLNSAPMYRQF 225

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 47/212 (22%), Positives = 72/212 (33%), Gaps = 36/212 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA GIG  TA++     A V+IA        +    I    D      +  D++    +
Sbjct: 23  GGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNI-GSPDVIS--FVHCDVTKDEDV 79

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCPYQI---SEDGIEMQFATNHIGHFLLTNLLLDT 119
           ++     IA +  L+I+  N G++   PY I     +  +     N  G FL+       
Sbjct: 80  RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARV 139

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH--- 176
           M    K     G IV  +SI+                 AG      Y  +K A +     
Sbjct: 140 MIPAKK-----GSIVFTASIS-------SF-------TAGEGVSHVYTATKHAVLGLTTS 180

Query: 177 -ANELSRRFQEEGVNITANSVHPGLIMTNLFK 207
              EL          I  N V P ++ + L  
Sbjct: 181 LCTELGEY------GIRVNCVSPYIVASPLLT 206

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 78.8 bits (195), Expect = 3e-17
 Identities = 51/207 (24%), Positives = 76/207 (36%), Gaps = 31/207 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIA--ARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           GG SGIG   A   A   A V I         A + + LI  E+   +   L  DLS  +
Sbjct: 56  GGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALI--EECGRKAVLLPGDLSDES 113

Query: 62  SIKDFAQNFIALNLPLNILINNAGI-MFCPY--QISEDGIEMQFATNHIGHFLLTNLLLD 118
             +            L+IL   AG     P    ++ +  +  FA N    F +T   + 
Sbjct: 114 FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIP 173

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            + +     G    I+  SSI     Y+               D   Y  +K A + ++ 
Sbjct: 174 LLPK-----G--ASIITTSSIQA---YQP---------SPHLLD---YAATKAAILNYSR 211

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNL 205
            L+++  E+G  I  N V PG I T L
Sbjct: 212 GLAKQVAEKG--IRVNIVAPGPIWTAL 236

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 77.7 bits (192), Expect = 4e-17
 Identities = 24/204 (11%), Positives = 57/204 (27%), Gaps = 37/204 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG   +G    +    R   V          A+ +  + + +  T + D +  ++  +  
Sbjct: 14  GGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLG 73

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
                      +  ++ ++  AG         +      ++ +  +     + ++L    
Sbjct: 74  -----------DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKH 122

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           +          G +    + A      G I                YG +K A       
Sbjct: 123 LKEG-------GLLTLAGAKAALDGTPGMI---------------GYGMAKGAVHQLCQS 160

Query: 180 LSRRFQEEGVNITANSVHPGLIMT 203
           L+ +         A +V P  + T
Sbjct: 161 LAGKNSGMPSGAAAIAVLPVTLDT 184

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 78.0 bits (193), Expect = 4e-17
 Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 37/214 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIGL   R +A   A+V +  R+ A A E  + + KE    +    + D+S+   +
Sbjct: 21  GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV-KTKAYQCDVSNTDIV 79

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ-------FATNHIGHFLLTNLL 116
               Q   A   P++ LI NAG+      + +   E+        +  N  G F     +
Sbjct: 80  TKTIQQIDADLGPISGLIANAGV-----SVVKPATELTHEDFAFVYDVNVFGVFNTCRAV 134

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
                +  +    +G IV  SS++        I     +   G   +  Y  SK A   +
Sbjct: 135 AKLWLQKQQ----KGSIVVTSSMS------SQI--INQSSLNGSLTQVFYNSSK-AACSN 181

Query: 177 -----ANELSRRFQEEGVNITANSVHPGLIMTNL 205
                A E +         I  N++ PG + T+ 
Sbjct: 182 LVKGLAAEWASA------GIRVNALSPGYVNTDQ 209

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 77.5 bits (192), Expect = 5e-17
 Identities = 28/208 (13%), Positives = 50/208 (24%), Gaps = 41/208 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSSIAS 62
                 G      L      V+    + A AA   R     E+             +   
Sbjct: 8   HARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFES--ENPGTIA-------LAEQK 58

Query: 63  IKDFAQNFIALNLPLNILINNAGI----MFCP-YQISEDGIEMQFATNHIGHFLLTNLLL 117
            +      +     ++ +++N  I       P    SE  I   F    I   LL    +
Sbjct: 59  PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAI 118

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANIL 175
             +            ++ ++S   +                 Y   +A      + A   
Sbjct: 119 APLRAAGG-----ASVIFITSSVGKKPLAY---------NPLYGPARAATVALVESA--- 161

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMT 203
            A  LSR        I   ++ P     
Sbjct: 162 -AKTLSRD------GILLYAIGPNFFNN 182

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 77.5 bits (192), Expect = 5e-17
 Identities = 56/208 (26%), Positives = 78/208 (37%), Gaps = 40/208 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG   A  LA   A VI++  N   A  A   I       +   +  D+S   S+
Sbjct: 13  GAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSV 67

Query: 64  KDFAQNFIALNLPLNILINNAGI------MFCPYQISEDGIEMQFATNHIGHFLLTNLLL 117
           K       AL   ++IL+NNA I            +  D        N  G F++T    
Sbjct: 68  KALFAEIQALTGGIDILVNNASIVPFVAWD----DVDLDHWRKIIDVNLTGTFIVTRAGT 123

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANIL 175
           D M    K     GR+++++S         G         A Y   K    G ++     
Sbjct: 124 DQMRAAGK----AGRVISIASNTFFA----GTPNM-----AAYVAAKGGVIGFTRAL--- 167

Query: 176 HANELSRRFQEEGVNITANSVHPGLIMT 203
            A EL +       NITAN+V PGLI +
Sbjct: 168 -ATELGKY------NITANAVTPGLIES 188

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 78.6 bits (194), Expect = 5e-17
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 13/143 (9%)

Query: 4   GGASGIGLETARVLALRKA---HVIIAARNMAAANEARQLILKE-DDTARVDTLKLDLSS 59
           G +SGIGL  A  LA   +    V    R++       +           ++TL+LD+  
Sbjct: 9   GCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD 68

Query: 60  IASIKDFAQNFIALNLPLNILINNAGI-MFCPY-QISEDGIEMQFATNHIGHFLLTNLLL 117
             S+    +        +++L+ NAG+ +  P   + ED +      N +G   +    L
Sbjct: 69  SKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFL 126

Query: 118 DTMNRTAKETGIEGRIVNLSSIA 140
             M +        GR++   S+ 
Sbjct: 127 PDM-KRRG----SGRVLVTGSVG 144

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 77.3 bits (191), Expect = 6e-17
 Identities = 38/218 (17%), Positives = 53/218 (24%), Gaps = 45/218 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G ASGIG     +LA     VI   R  A                R   +   L     +
Sbjct: 8   GSASGIGAALKELLARAGHTVIGIDRGQADIEADL-----STPGGRETAVAAVLDRCGGV 62

Query: 64  KDFAQN-----FIALNLPLNILINNAGIMFCPYQ----ISEDGIEMQFATNHIGHFLLTN 114
            D           A N  L + +N  G+          +S            I       
Sbjct: 63  LDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGA 122

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
             L  +          G       +A Q                      AY  SK A  
Sbjct: 123 AELPMVEAMLA-----GDEARAIELAEQQGQTHL----------------AYAGSKYAVT 161

Query: 175 L----HANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
                +  + + R       +  N V PG + T L + 
Sbjct: 162 CLARRNVVDWAGR------GVRLNVVAPGAVETPLLQA 193

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 76.6 bits (189), Expect = 1e-16
 Identities = 26/203 (12%), Positives = 54/203 (26%), Gaps = 35/203 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG   +G             V+    +  A ++A   IL + +    +  +  L   AS 
Sbjct: 10  GGKGALGSAILEFFKKNGYTVLNIDLS--ANDQADSNILVDGNKNWTEQEQSILEQTASS 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
              +Q        ++ +   AG         +      ++    +     +   L    +
Sbjct: 68  LQGSQ--------VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHL 119

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                     G +    + A        I                YG +K A     + L
Sbjct: 120 KPG-------GLLQLTGAAAAMGPTPSMI---------------GYGMAKAAVHHLTSSL 157

Query: 181 SRRFQEEGVNITANSVHPGLIMT 203
           + +      N    ++ P  + T
Sbjct: 158 AAKDSGLPDNSAVLTIMPVTLDT 180

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 76.8 bits (190), Expect = 1e-16
 Identities = 51/234 (21%), Positives = 84/234 (35%), Gaps = 52/234 (22%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-------------ARNMAAANEARQLILKEDDTARV 50
           G A G G   A  LA   A +I                 +    +E  +L+  ED   + 
Sbjct: 22  GAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV--EDQGRKA 79

Query: 51  DTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF----ATNH 106
            T  LD+   A++++   + +     L++++ NAG+    +    +  + Q+      N 
Sbjct: 80  LTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGV--LSWGRVWELTDEQWDTVIGVNL 137

Query: 107 IGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAY 166
            G +      +  M     E G  G IV +SS A       G++               Y
Sbjct: 138 TGTWRTLRATVPAM----IEAGNGGSIVVVSSSA-------GLK--------ATPGNGHY 178

Query: 167 GQSK-----LANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF 215
             SK     L N L A EL          I  NS+HP  + T + +  A++  F
Sbjct: 179 SASKHGLTALTNTL-AIELGEY------GIRVNSIHPYSVETPMIEPEAMMEIF 225

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 76.5 bits (189), Expect = 2e-16
 Identities = 34/213 (15%), Positives = 68/213 (31%), Gaps = 40/213 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNM-------AAANEARQLILKEDDTARVDTLKLD 56
           GG+ GIGL  A+ +A   A+V + A++             A + I  E+   +   +  D
Sbjct: 16  GGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEI--EEAGGQALPIVGD 73

Query: 57  LSSIASIKDFAQNFIALNLPLNILINNAGIM-FCP-YQISEDGIEMQFATNHIGHFLLTN 114
           +    ++       +     ++I +NNA  +      ++     ++       G + ++ 
Sbjct: 74  IRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQ 133

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
             +  M            I+ LS                I     +     Y  +K    
Sbjct: 134 SCIPHMKGRD-----NPHILTLSPP--------------IRLEPKWLRPTPYMMAKYGMT 174

Query: 175 L----HANELSRRFQEEGVNITANSVHPGLIMT 203
           L     A EL          I +N++ P   + 
Sbjct: 175 LCALGIAEELRDA------GIASNTLWPRTTVA 201

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 76.0 bits (188), Expect = 2e-16
 Identities = 62/219 (28%), Positives = 90/219 (41%), Gaps = 61/219 (27%)

Query: 5   GAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GAS GIG E A  LA + A V+  A + A+A +    +  ++   +   L L++S I SI
Sbjct: 12  GASRGIGFEVAHALASKGATVVGTATSQASAEKFENSM--KEKGFKARGLVLNISDIESI 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ---------FATNHIGHFLLTN 114
           ++F     A NL ++IL+NNAG       I+ D + M+           TN    F ++ 
Sbjct: 70  QNFFAEIKAENLAIDILVNNAG-------ITRDNLMMRMSEDEWQSVINTNLSSIFRMSK 122

Query: 115 LLLDTM--NRTAKETGIEGRIVNLSSI------AHQYTYKGGIRFQKINDRAGYSDKKA- 165
             +  M   R        GRI+++ S+        Q                 Y   KA 
Sbjct: 123 ECVRGMMKKRW-------GRIISIGSVVGSAGNPGQ---------------TNYCAAKAG 160

Query: 166 -YGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
             G SK      A E++ R      NIT N V PG I T
Sbjct: 161 VIGFSKSL----AYEVASR------NITVNVVAPGFIAT 189

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 75.8 bits (187), Expect = 2e-16
 Identities = 42/216 (19%), Positives = 75/216 (34%), Gaps = 35/216 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASG+GL TA  L  + A  ++     +      + +              D++S   +
Sbjct: 19  GGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDV 73

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQI--------SEDGIEMQFATNHIGHFLLTNL 115
           +            +++ +N AGI               + +  +     N +G F +  L
Sbjct: 74  QTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRL 133

Query: 116 LLDTMNRTAKETGIE-GRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
           +   M +   + G + G I+N +S+A      G         +A YS  K    G +   
Sbjct: 134 VAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG---------QAAYSASKGGIVGMTLPI 184

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
               A +L+         I   ++ PGL  T L   
Sbjct: 185 ----ARDLAPI------GIRVMTIAPGLFGTPLLTS 210

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 75.7 bits (187), Expect = 3e-16
 Identities = 49/214 (22%), Positives = 65/214 (30%), Gaps = 60/214 (28%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG  TA       A V    +                      T  +D++  A +
Sbjct: 14  GAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY------------PFATEVMDVADAAQV 61

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ---------FATNHIGHFLLTN 114
               Q  +A    L+ L+N AGI+         G   Q         FA N  G F L  
Sbjct: 62  AQVCQRLLAETERLDALVNAAGIL-------RMGATDQLSKEDWQQTFAVNVGGAFNLFQ 114

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
             ++   R        G IV ++S A                R G S   AYG SK A +
Sbjct: 115 QTMNQFRRQRG-----GAIVTVASDA-------AHT-----PRIGMS---AYGASK-AAL 153

Query: 175 LH-----ANELSRRFQEEGVNITANSVHPGLIMT 203
                    EL+         +  N V PG   T
Sbjct: 154 KSLALSVGLELAGS------GVRCNVVSPGSTDT 181

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 76.1 bits (188), Expect = 3e-16
 Identities = 47/236 (19%), Positives = 74/236 (31%), Gaps = 52/236 (22%)

Query: 4   GGASGIGLETARVLALRKAHVIIA----------------ARNMAAANEARQLILKEDDT 47
           G A G G   A  LA   A +I                  A       E   L+  +   
Sbjct: 18  GAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV--KGHN 75

Query: 48  ARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFAT 104
            R+ T ++D+    ++K    + +     L+I++ NAGI        + SE+        
Sbjct: 76  RRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDI 135

Query: 105 NHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKK 164
           N  G +      +  M       G  G I+  SS+        G++         Y    
Sbjct: 136 NLAGVWKTVKAGVPHM----IAGGRGGSIILTSSVG-------GLK--------AYPHTG 176

Query: 165 AYGQSK-----LANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF 215
            Y  +K     L       EL +        I  NSVHP  + T +  +      F
Sbjct: 177 HYVAAKHGVVGLMRAF-GVELGQH------MIRVNSVHPTHVKTPMLHNEGTFKMF 225

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 75.7 bits (187), Expect = 4e-16
 Identities = 48/222 (21%), Positives = 74/222 (33%), Gaps = 52/222 (23%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-------------ARNMAAANEARQLILKEDDTARV 50
           G A G G   A  +A   A +I                 +    +E  +L+  E    R+
Sbjct: 18  GAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV--EAANRRI 75

Query: 51  DTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF----ATNH 106
               +D      ++    + +A    L+I++ NAG+     Q  +D     F      N 
Sbjct: 76  VAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGV--AAPQAWDDITPEDFRDVMDINV 133

Query: 107 IGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAY 166
            G +         +     E G  G I+ +SS A       G++               Y
Sbjct: 134 TGTWNTVMAGAPRI----IEGGRGGSIILISSAA-------GMK--------MQPFMIHY 174

Query: 167 GQSK-----LANILHANELSRRFQEEGVNITANSVHPGLIMT 203
             SK     LA    A EL +       +I  NSVHPG + T
Sbjct: 175 TASKHAVTGLARAF-AAELGKH------SIRVNSVHPGPVNT 209

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 75.4 bits (186), Expect = 4e-16
 Identities = 57/217 (26%), Positives = 83/217 (38%), Gaps = 39/217 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G +SG G   A         VI  AR   A ++     L      R + + LD++    I
Sbjct: 12  GASSGFGRAIAEAAVAAGDTVIGTARRTEALDD-----LVAAYPDRAEAISLDVTDGERI 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
              A + +A    +++L+NNAG        + +E  +   F  +  G   LT  LL  M 
Sbjct: 67  DVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQM- 125

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE-L 180
           R        G +VN+SS   Q ++            AG+S   AY  +K      A E L
Sbjct: 126 RERG----SGSVVNISSFGGQLSF------------AGFS---AYSATK-----AALEQL 161

Query: 181 SRRFQEE----GVNITANSVHPGLIMTNLFKHSAVVM 213
           S    +E    G+ +    V PG   TNLF   A   
Sbjct: 162 SEGLADEVAPFGIKVLI--VEPGAFRTNLFGKGAAYF 196

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 76.4 bits (188), Expect = 4e-16
 Identities = 43/261 (16%), Positives = 79/261 (30%), Gaps = 43/261 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILK-----EDDTARVDTLKLDLS 58
           G + GIG   A   A   A+++IAA+      +    I       E    +     +D+ 
Sbjct: 52  GASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR 111

Query: 59  SIASIKDFAQNFIALNLPLNILINNAGIMF--CPYQISEDGIEMQFATNHIGHFLLTNLL 116
               I    +  I     ++IL+NNA  +            +++    N  G +L +   
Sbjct: 112 DEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKAC 171

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           +  + ++         I+N+S           +          Y+  K YG S     + 
Sbjct: 172 IPYLKKSKV-----AHILNISPPL-------NLNPVWFKQHCAYTIAK-YGMSMYVLGM- 217

Query: 177 ANELSRRFQEEGVNITANSVHPGLI----MTNLFKHSAVVMRFLKFFSFFLWKNVPQGAA 232
           A E           I  N++ P         ++     +  +  K              A
Sbjct: 218 AEEFKG-------EIAVNALWPKTAIHTAAMDMLGGPGIESQCRK----------VDIIA 260

Query: 233 TTCYVALHPNLKGVTGKYFLD 253
              Y       K  TG + +D
Sbjct: 261 DAAYSIFQKP-KSFTGNFVID 280

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 75.4 bits (186), Expect = 5e-16
 Identities = 45/226 (19%), Positives = 66/226 (29%), Gaps = 52/226 (23%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A  IG   A  L      V+I   N A A  +    L ++ +      + DL++   +
Sbjct: 30  GAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVL 89

Query: 64  KDFAQNFIALNL----PLNILINNAGI--------MFCPYQISEDGIEMQF----ATNHI 107
               +  I          ++L+NNA                 +   +E Q      TN I
Sbjct: 90  PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAI 149

Query: 108 GHFLLTNLLLDTMNRTAKETGIE-GRIVNLSSI------AHQYTY---KGGIRFQKINDR 157
             FLLT         T          IVNL              Y   K  +        
Sbjct: 150 APFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALV------- 202

Query: 158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
                    G ++ A    A EL+         I  N V PG+ + 
Sbjct: 203 ---------GLTQSA----ALELAPY------GIRVNGVAPGVSLL 229

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 74.9 bits (185), Expect = 5e-16
 Identities = 54/217 (24%), Positives = 80/217 (36%), Gaps = 56/217 (25%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   A  LA R A VI  A   A A        +     R     L+++   ++
Sbjct: 35  GASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRG--AVLNVNDATAV 92

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ---------FATNHIGHFLLTN 114
               ++ +     LN+L+NNAG       I++D + M+           TN    F L+ 
Sbjct: 93  DALVESTLKEFGALNVLVNNAG-------ITQDQLAMRMKDDEWDAVIDTNLKAVFRLSR 145

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSI------AHQYTYKGGIRFQKINDRAGYSDKKA--Y 166
            +L  M +        GRIVN++S+        Q                 Y+  KA   
Sbjct: 146 AVLRPMMKARG-----GRIVNITSVVGSAGNPGQ---------------VNYAAAKAGVA 185

Query: 167 GQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           G ++      A E+  R       IT N V PG I T
Sbjct: 186 GMTRAL----AREIGSR------GITVNCVAPGFIDT 212

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 74.9 bits (185), Expect = 7e-16
 Identities = 56/211 (26%), Positives = 84/211 (39%), Gaps = 44/211 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG E A++LA   +HVI  +R   + +     I  +           D+S    I
Sbjct: 51  GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI--KSFGYESSGYAGDVSKKEEI 108

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIGHFLLTN 114
            +     +  +  ++IL+NNAG       I+ D + +     ++     TN    F +T 
Sbjct: 109 SEVINKILTEHKNVDILVNNAG-------ITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 161

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
            +   M          GRI+N+SSI       G    Q     A YS  KA   G +K  
Sbjct: 162 PISKRMINNRY-----GRIINISSIVGLTGNVG----Q-----ANYSSSKAGVIGFTKSL 207

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMT 203
               A EL+ R      NIT N++ PG I +
Sbjct: 208 ----AKELASR------NITVNAIAPGFISS 228

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 74.9 bits (185), Expect = 8e-16
 Identities = 40/227 (17%), Positives = 68/227 (29%), Gaps = 38/227 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIA------------ARNMAAANEARQLILKEDDTARVD 51
           G A G G   A  LA   A +I                      E  + +  E    R+ 
Sbjct: 35  GAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV--EALGRRII 92

Query: 52  TLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIM---FCPYQISEDGIEMQFATNHIG 108
             ++D+    +++    + +     L+I++ NA +        ++           N  G
Sbjct: 93  ASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNG 152

Query: 109 HFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQ 168
            ++   + +  +          G IV  SSI      +             Y   K  G 
Sbjct: 153 AWITARVAIPHI----MAGKRGGSIVFTSSIGGLRGAENI---------GNYIASKH-GL 198

Query: 169 SKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF 215
             L   + A EL  R      NI  N V P  + T +  +      F
Sbjct: 199 HGLMRTM-ALELGPR------NIRVNIVCPSSVATPMLLNEPTYRMF 238

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 74.1 bits (183), Expect = 8e-16
 Identities = 44/206 (21%), Positives = 68/206 (33%), Gaps = 50/206 (24%)

Query: 5   GAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
            AS GIG   A VL+   A V I ARN      +    +  D    +D L   +  +   
Sbjct: 26  AASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEV--- 82

Query: 64  KDFAQNFIALNLPLNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
                         +IL+ NAG      F   +++ +  +    +  +    +    L  
Sbjct: 83  --------------DILVLNAGGPKAGFF--DELTNEDFKEAIDSLFLNMIKIVRNYLPA 126

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANILHA 177
           M    KE G  GRIV ++S +        I           +  +    G  K      +
Sbjct: 127 M----KEKG-WGRIVAITSFSV----ISPIENL-----YTSNSARMALTGFLKTL----S 168

Query: 178 NELSRRFQEEGVNITANSVHPGLIMT 203
            E++         IT N V PG   T
Sbjct: 169 FEVAPY------GITVNCVAPGWTET 188

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 73.3 bits (181), Expect = 2e-15
 Identities = 54/217 (24%), Positives = 86/217 (39%), Gaps = 59/217 (27%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   A +LA R A VI  A + + A       + +        + L++++  SI
Sbjct: 16  GASRGIGKAIAELLAERGAKVIGTATSESGAQA-----ISDYLGDNGKGMALNVTNPESI 70

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ---------FATNHIGHFLLTN 114
           +   +        ++IL+NNAG       I+ D + M+           TN    F L+ 
Sbjct: 71  EAVLKAITDEFGGVDILVNNAG-------ITRDNLLMRMKEEEWSDIMETNLTSIFRLSK 123

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSI------AHQYTYKGGIRFQKINDRAGYSDKKA--Y 166
            +L  M +  +     GRI+N+ S+      A Q               A Y+  KA   
Sbjct: 124 AVLRGMMKKRQ-----GRIINVGSVVGTMGNAGQ---------------ANYAAAKAGVI 163

Query: 167 GQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           G +K      A E++ R       +T N+V PG I T
Sbjct: 164 GFTKSM----AREVASR------GVTVNTVAPGFIET 190

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 73.3 bits (181), Expect = 2e-15
 Identities = 45/210 (21%), Positives = 72/210 (34%), Gaps = 48/210 (22%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG  T  + A   A ++          EA + +           + +D++  AS+
Sbjct: 12  GAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASV 64

Query: 64  KDFAQNFIALNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGHFLLTNL 115
           +      +A    L+ +++ AGI        M        +  E+    N  G FL+   
Sbjct: 65  ERGFAEALAHLGRLDGVVHYAGITRDNFHWKM------PLEDWELVLRVNLTGSFLVAKA 118

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLAN 173
             + M          G IV  +S  +      G   Q     A Y+   A   G ++   
Sbjct: 119 ASEAMREKNP-----GSIVLTASRVYL-----GNLGQ-----ANYAASMAGVVGLTRTL- 162

Query: 174 ILHANELSRRFQEEGVNITANSVHPGLIMT 203
              A EL R        I  N++ PG I T
Sbjct: 163 ---ALELGRW------GIRVNTLAPGFIET 183

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 73.7 bits (182), Expect = 2e-15
 Identities = 56/218 (25%), Positives = 76/218 (34%), Gaps = 62/218 (28%)

Query: 5   GAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GA+ GIG   AR    + A V +         E     +  D    V     +LS   SI
Sbjct: 34  GATGGIGEAIARCFHAQGAIVGLHGTREDKLKE-----IAADLGKDVFVFSANLSDRKSI 88

Query: 64  KDFAQNFIALNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGHFLLTNL 115
           K  A+        ++IL+NNAGI        M       +   +   A N      LT  
Sbjct: 89  KQLAEVAEREMEGIDILVNNAGITRDGLFVRM------QDQDWDDVLAVNLTAASTLTRE 142

Query: 116 LLDTM--NRTAKETGIEGRIVNLSSI------AHQYTYKGGIRFQKINDRAGYSDKKA-- 165
           L+ +M   R        GRI+N++SI        Q                 Y   KA  
Sbjct: 143 LIHSMMRRRY-------GRIINITSIVGVVGNPGQ---------------TNYCAAKAGL 180

Query: 166 YGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
            G SK      A E++ R      NIT N + PG I +
Sbjct: 181 IGFSKAL----AQEIASR------NITVNCIAPGFIKS 208

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 57/220 (25%), Positives = 84/220 (38%), Gaps = 61/220 (27%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG   A V A   A V+    +  AA + +++  K   TA    L LD+++  ++
Sbjct: 220 GAARGIGATIAEVFARDGATVVAIDVD-GAAEDLKRVADKVGGTA----LTLDVTADDAV 274

Query: 64  KDFAQNFIA-LNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGHFLLTN 114
                +        ++IL+NNAGI        M       E   +   A N +    LT 
Sbjct: 275 DKITAHVTEHHGGKVDILVNNAGITRDKLLANM------DEKRWDAVIAVNLLAPQRLTE 328

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG------YSDKKA--Y 166
            L+             GR++ LSS+A       GI        AG      Y+  KA   
Sbjct: 329 GLVGNGTIGEG-----GRVIGLSSMA-------GI--------AGNRGQTNYATTKAGMI 368

Query: 167 GQSKLANILHANELSRRFQEEGVNITANSVHPGLI---MT 203
           G ++      A  L+ +       IT N+V PG I   MT
Sbjct: 369 GLAEAL----APVLADK------GITINAVAPGFIETKMT 398

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 72.1 bits (178), Expect = 4e-15
 Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 45/212 (21%)

Query: 4   GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + G+G   A  L    A++++  +    + +   +          V   K D+ +   
Sbjct: 12  GSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVV--AKGDVKNPED 69

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIGHFLLT 113
           +++  +  +     ++IL+NNAG       I+ D + +      +     TN    +L T
Sbjct: 70  VENMVKTAMDAFGRIDILVNNAG-------ITRDTLMLKMSEKDWDDVLNTNLKSAYLCT 122

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKL 171
             +   M +        G+I+N++SIA      G    Q     A Y+  KA   G +K 
Sbjct: 123 KAVSKIMLKQKS-----GKIINITSIAGIIGNAG----Q-----ANYAASKAGLIGFTKS 168

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMT 203
                A E + +       I  N+V PG+I T
Sbjct: 169 I----AKEFAAK------GIYCNAVAPGIIKT 190

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 72.2 bits (178), Expect = 5e-15
 Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 45/214 (21%)

Query: 4   GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
            G  G+G +    L  +   V +    +  A    ++    +D   R+  ++ D++    
Sbjct: 14  AGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETY--KDVEERLQFVQADVTKKED 71

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIGHFLLT 113
           +    +  ++    ++ LINNAG       + E    +     ++      N    F L 
Sbjct: 72  LHKIVEEAMSHFGKIDFLINNAG-----PYVFERKKLVDYEEDEWNEMIQGNLTAVFHLL 126

Query: 114 NLLLDTMNRTAKETGIEGRIVNLS--SIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQS 169
            L++  M +        GRI+N           +           R+ ++  K      +
Sbjct: 127 KLVVPVMRKQNF-----GRIINYGFQGADSAPGWIY---------RSAFAAAKVGLVSLT 172

Query: 170 KLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           K      A E +         ITAN V PG I+ 
Sbjct: 173 KTV----AYEEAEY------GITANMVCPGDIIG 196

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 71.8 bits (177), Expect = 5e-15
 Identities = 51/218 (23%), Positives = 73/218 (33%), Gaps = 66/218 (30%)

Query: 5   GAS-GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GAS GIG   AR+L    + VII+  N           L             +L++    
Sbjct: 21  GASSGIGSAIARLLHKLGSKVIISGSNEEKLKS-----LGNALKDNYTIEVCNLANKEEC 75

Query: 64  KDFAQNFIALNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGHFLLTNL 115
            +           L+IL+ NAGI        M       +   +     N   +F+L   
Sbjct: 76  SNLISKTSN----LDILVCNAGITSDTLAIRM------KDQDFDKVIDINLKANFILNRE 125

Query: 116 LLDTM--NRTAKETGIEGRIVNLSSI------AHQYTYKGGIRFQKINDRAGYSDKKA-- 165
            +  M   R        GRI+N+SSI        Q               A Y   KA  
Sbjct: 126 AIKKMIQKRY-------GRIINISSIVGIAGNPGQ---------------ANYCASKAGL 163

Query: 166 YGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
            G +K      + E++ R       IT N+V PG I +
Sbjct: 164 IGMTKSL----SYEVATR------GITVNAVAPGFIKS 191

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 71.5 bits (176), Expect = 6e-15
 Identities = 43/214 (20%), Positives = 71/214 (33%), Gaps = 43/214 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASG+G   A  L  R   V++                   +   +  ++ D++    +
Sbjct: 9   GGASGLGRAAALALKARGYRVVVLDLR--------------REGEDLIYVEGDVTREEDV 54

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDG------IEMQFATNHIGHFLLTNLLL 117
           +           PL  +++ AG+      + ++G             N +G F +  L  
Sbjct: 55  RRAVARAQEEA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAA 113

Query: 118 DTMNRT-AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLANI 174
             M        G  G IVN +S+A      G         +A Y+  K      +  A  
Sbjct: 114 WAMRENPPDAEGQRGVIVNTASVAAFEGQIG---------QAAYAASKGGVVALTLPA-- 162

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
             A EL+         I   +V PGL  T L + 
Sbjct: 163 --ARELAGW------GIRVVTVAPGLFDTPLLQG 188

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 71.8 bits (177), Expect = 8e-15
 Identities = 49/215 (22%), Positives = 77/215 (35%), Gaps = 51/215 (23%)

Query: 4   GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG  G+G   +R L      V +  +      +         D         +D++   S
Sbjct: 32  GGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHE--RDAGRDFKAYAVDVADFES 89

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIGHFLLT 113
            +  A+  +A    +++LINNAG       I+ D   M      +     T+    F +T
Sbjct: 90  CERCAEKVLADFGKVDVLINNAG-------ITRDATFMKMTKGDWDAVMRTDLDAMFNVT 142

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG---YSDKKA--YGQ 168
              +  M          GRIVN+ S+        G R        G   Y+  KA  +G 
Sbjct: 143 KQFIAGMVERRF-----GRIVNIGSVN-------GSRGA-----FGQANYASAKAGIHGF 185

Query: 169 SKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           +K      A E ++R       IT N+V PG + T
Sbjct: 186 TKTL----ALETAKR------GITVNTVSPGYLAT 210

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 71.4 bits (176), Expect = 8e-15
 Identities = 58/216 (26%), Positives = 79/216 (36%), Gaps = 53/216 (24%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG   A  LA   + VII   +   A    +  +      +   ++++L S  SI
Sbjct: 14  GSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEE-IANKYGVKAHGVEMNLLSEESI 72

Query: 64  KDFAQNFIALNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGHFLLTNL 115
               +    L   ++IL+NNAGI        M      S    E     N  G FL+T  
Sbjct: 73  NKAFEEIYNLVDGIDILVNNAGITRDKLFLRM------SLLDWEEVLKVNLTGTFLVTQN 126

Query: 116 LLDTMNRTAKETGIEGRIVNLSSI------AHQYTYKGGIRFQKINDRAGYSDKKA--YG 167
            L  M +        GRIVN+SS+        Q                 YS  KA   G
Sbjct: 127 SLRKMIKQRW-----GRIVNISSVVGFTGNVGQ---------------VNYSTTKAGLIG 166

Query: 168 QSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
            +K      A EL+ R      N+  N+V PG I T
Sbjct: 167 FTKSL----AKELAPR------NVLVNAVAPGFIET 192

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 72.0 bits (177), Expect = 8e-15
 Identities = 42/237 (17%), Positives = 68/237 (28%), Gaps = 57/237 (24%)

Query: 4   GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G A  +G   A  L      V +   R+ A AN     +          T++ DLS++A+
Sbjct: 16  GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL-NARRPNSAITVQADLSNVAT 74

Query: 63  IKDFAQNFIALNL-----------------PLNILINNAGIMF----------------C 89
                 +  A                      ++L+NNA   +                 
Sbjct: 75  APVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVG 134

Query: 90  PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIE-GRIVNLSSIAHQYTYKGG 148
             +  E      F +N I  + L       +  T  +       I+N+          G 
Sbjct: 135 DREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLG- 193

Query: 149 IRFQKINDRAGYSDKKA--YGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
                      Y+  K    G ++ A    A EL+         I  N V PGL + 
Sbjct: 194 --------YTIYTMAKGALEGLTRSA----ALELAPL------QIRVNGVGPGLSVL 232

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 71.0 bits (175), Expect = 1e-14
 Identities = 47/214 (21%), Positives = 76/214 (35%), Gaps = 49/214 (22%)

Query: 4   GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG  GIG    + L      V+     N     +  +    +         + ++    S
Sbjct: 20  GGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQ--KALGFDFYASEGNVGDWDS 77

Query: 63  IKDFAQNFIALNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGHFLLTN 114
            K       A    +++L+NNAGI        M      + +  +    TN    F +T 
Sbjct: 78  TKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKM------TREDWQAVIDTNLTSLFNVTK 131

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG---YSDKKA--YGQS 169
            ++D M          GRI+N+SS+        G + Q      G   YS  KA  +G +
Sbjct: 132 QVIDGMVERGW-----GRIINISSVN-------GQKGQ-----FGQTNYSTAKAGIHGFT 174

Query: 170 KLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
                  A E++ +       +T N+V PG I T
Sbjct: 175 MSL----AQEVATK------GVTVNTVSPGYIGT 198

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 24/211 (11%), Positives = 55/211 (26%), Gaps = 49/211 (23%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
                 G+ +A  L+     V     +    +E                 +L   S    
Sbjct: 8   NVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA--------ETYPQLKPMSEQEP 59

Query: 64  KDFAQNFIALNLPLNILINNAGI---------MFCPYQISEDGIEMQFATNHIGHFLLTN 114
            +  +   +    +++L++N                   + +          I  F L N
Sbjct: 60  AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKY------AVEDYRGAVEALQIRPFALVN 113

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
            +   M +        G I+ ++S      +            + Y+  +A     +   
Sbjct: 114 AVASQMKKRKS-----GHIIFITSAT---PFGPWKE------LSTYTSARAGACTLANAL 159

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMT 203
               + EL         NI   ++ P  + +
Sbjct: 160 ----SKELGEY------NIPVFAIGPNYLHS 180

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 39/213 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAA-------ANEARQLILKEDDTARVDTLKLD 56
           G + GIGL  A   A   A+V IAA++  A        + A   +       +   LK D
Sbjct: 13  GASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAV--NAAGGQGLALKCD 70

Query: 57  LSSIASIKDFAQNFIALNLPLNILINNAGIMF-CP-YQISEDGIEMQFATNHIGHFLLTN 114
           +     ++      +     ++IL+NNA  ++            ++    N  G F+   
Sbjct: 71  IREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQ 130

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
             L  + +          I+ L+                      ++    Y  +K+   
Sbjct: 131 ACLPHLLQAPN-----PHILTLAPPPSLNP----------AWWGAHT---GYTLAKMGMS 172

Query: 175 L----HANELSRRFQEEGVNITANSVHPGLIMT 203
           L     A E   +       +  N++ P  ++ 
Sbjct: 173 LVTLGLAAEFGPQ------GVAINALWPRTVIA 199

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 50/216 (23%), Positives = 77/216 (35%), Gaps = 39/216 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASG+GL T + L    A V++             L        R      D++  A++
Sbjct: 16  GGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VADL------GDRARFAAADVTDEAAV 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGI--EMQFA----TNHIGHFLLTNLLL 117
                    +   L I++N AG       +S DG+     F      N +G F +  L  
Sbjct: 68  ASALDLAETMG-TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAA 126

Query: 118 DTMNRT---AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
           + + +T          G I+N +S+A    + G I  Q     A YS  K    G +   
Sbjct: 127 ERIAKTEPVGPNAEERGVIINTASVA---AFDGQIG-Q-----AAYSASKGGVVGMTLPI 177

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
               A +L+         I   ++ PGL  T L   
Sbjct: 178 ----ARDLASH------RIRVMTIAPGLFDTPLLAS 203

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 58/212 (27%), Positives = 84/212 (39%), Gaps = 45/212 (21%)

Query: 4   GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIG   A  LA   A V +  A +  AA+E    I      A    +K D+S  + 
Sbjct: 35  GASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFA--VKADVSQESE 92

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIGHFLLT 113
           ++      I     L++L+NNAG       I+ D + +      +      N  G FL +
Sbjct: 93  VEALFAAVIERWGRLDVLVNNAG-------ITRDTLLLRMKRDDWQSVLDLNLGGVFLCS 145

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKL 171
                 M +        GRI+N++S+  +    G    Q     A YS  KA   G +K 
Sbjct: 146 RAAAKIMLKQRS-----GRIINIASVVGEMGNPG----Q-----ANYSAAKAGVIGLTKT 191

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMT 203
                A EL+ R       IT N+V PG I T
Sbjct: 192 V----AKELASR------GITVNAVAPGFIAT 213

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 69.8 bits (172), Expect = 3e-14
 Identities = 57/212 (26%), Positives = 83/212 (39%), Gaps = 45/212 (21%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIG   A  L      V++  AR+  AA E  + I      A       D+S  A 
Sbjct: 8   GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAIT--FGGDVSKEAD 65

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIGHFLLT 113
           ++   +  I     +++++NNAG       I+ D + +     Q+      N  G FL T
Sbjct: 66  VEAMMKTAIDAWGTIDVVVNNAG-------ITRDTLLIRMKKSQWDEVIDLNLTGVFLCT 118

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKL 171
                 M +  K     GRI+N++S+       G    Q     A Y+  KA   G SK 
Sbjct: 119 QAATKIMMKKRK-----GRIINIASVVGLIGNIG----Q-----ANYAAAKAGVIGFSKT 164

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           A    A E + R      NI  N V PG I +
Sbjct: 165 A----AREGASR------NINVNVVCPGFIAS 186

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 69.8 bits (172), Expect = 3e-14
 Identities = 43/209 (20%), Positives = 67/209 (32%), Gaps = 43/209 (20%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ GIG   A  L  R   V IA+RN   A ++               L  DL      
Sbjct: 9   GGSRGIGRAIAEALVARGYRVAIASRNPEEAAQS----------LGAVPLPTDLEK-DDP 57

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ-------FATNHIGHFLLTNLL 116
           K   +  +     L++L++ A +      + +  +E+           +    FLL    
Sbjct: 58  KGLVKRALEALGGLHVLVHAAAV-----NVRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              M     E G  GR++ + S+                    Y+  K      L   L 
Sbjct: 113 APHM----AEAG-WGRVLFIGSVT-------TFTAGGPVPIPAYTTAKT-ALLGLTRAL- 158

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNL 205
           A E +R        I  N + PG + T  
Sbjct: 159 AKEWARL------GIRVNLLCPGYVETEF 181

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 69.8 bits (172), Expect = 3e-14
 Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 52/222 (23%)

Query: 1   MLAG------GAS-GIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDT 52
           ML G      GAS GIG   A  LA + A+V++  A N   ANE    I K    A    
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIA-- 58

Query: 53  LKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ---------FA 103
           ++ D+++   + +  +  + +   ++IL+NNAG       +++D + M+           
Sbjct: 59  VRADVANAEDVTNMVKQTVDVFGQVDILVNNAG-------VTKDNLLMRMKEEEWDTVIN 111

Query: 104 TNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK 163
           TN  G FL T  +   M R        GRIVN++S+       G    Q     A Y   
Sbjct: 112 TNLKGVFLCTKAVSRFMMRQRH-----GRIVNIASVVGVTGNPG----Q-----ANYVAA 157

Query: 164 KA--YGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           KA   G +K +    A EL+ R      NIT N++ PG I T
Sbjct: 158 KAGVIGLTKTS----AKELASR------NITVNAIAPGFIAT 189

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 70.7 bits (174), Expect = 3e-14
 Identities = 52/228 (22%), Positives = 87/228 (38%), Gaps = 41/228 (17%)

Query: 4   GGASGIGLETARVLALRKAHVII------------AARNMAAANEARQLILKEDDTARVD 51
           G A G G   A  LA   A ++             A  +     E  +L+ ++    R+ 
Sbjct: 53  GAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG--RRII 110

Query: 52  TLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF----ATNHI 107
             + D+  +AS++      +A    ++IL++N GI            + Q+     TN I
Sbjct: 111 ARQADVRDLASLQAVVDEALAEFGHIDILVSNVGI--SNQGEVVSLTDQQWSDILQTNLI 168

Query: 108 GHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYG 167
           G +     +L +M     E G  G ++ +SS        G          + Y+  K  G
Sbjct: 169 GAWHACRAVLPSM----IERGQGGSVIFVSSTVGLRGAPGQ---------SHYAASKH-G 214

Query: 168 QSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF 215
              L   L ANE+ R       NI  NSV+PG + T +  +  ++  F
Sbjct: 215 VQGLMLSL-ANEVGRH------NIRVNSVNPGAVNTEMALNEKLLKMF 255

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 69.9 bits (172), Expect = 3e-14
 Identities = 39/206 (18%), Positives = 74/206 (35%), Gaps = 27/206 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   A   A   A V I   +  A  +A  L   +         K ++S   S+
Sbjct: 41  GSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ--KTYGVHSKAYKCNISDPKSV 98

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF----ATNHIGHFLLTNLLLDT 119
           ++           +++ + NAG+ +      +      +    + +  G +  ++ +   
Sbjct: 99  EETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKI 158

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
             +  K     G ++  SSI+       G        +A Y+  KA   + LA  L A E
Sbjct: 159 FKKNGK-----GSLIITSSIS-------GKIVNIPQLQAPYNTAKA-ACTHLAKSL-AIE 204

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNL 205
            +            N++ PG I T++
Sbjct: 205 WAPF-------ARVNTISPGYIDTDI 223

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 70.5 bits (173), Expect = 3e-14
 Identities = 42/237 (17%), Positives = 68/237 (28%), Gaps = 57/237 (24%)

Query: 4   GGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G A  +G   A  L      V +   R+ A AN     +          T++ DLS++A+
Sbjct: 53  GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL-NARRPNSAITVQADLSNVAT 111

Query: 63  IKDFAQNFIALNL-----------------PLNILINNAGIMF----------------C 89
                 +  A                      ++L+NNA   +                 
Sbjct: 112 APVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVG 171

Query: 90  PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIE-GRIVNLSSIAHQYTYKGG 148
             +  E      F +N I  + L       +  T  +       I+N+          G 
Sbjct: 172 DREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLG- 230

Query: 149 IRFQKINDRAGYSDKKA--YGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
                      Y+  K    G ++ A    A EL+         I  N V PGL + 
Sbjct: 231 --------YTIYTMAKGALEGLTRSA----ALELAPL------QIRVNGVGPGLSVL 269

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 69.0 bits (170), Expect = 5e-14
 Identities = 56/222 (25%), Positives = 84/222 (37%), Gaps = 52/222 (23%)

Query: 1   MLAG------GAS-GIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDT 52
           M         GAS GIG   A  LA    +V +  A +   A    + I  +   +    
Sbjct: 1   MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFA-- 58

Query: 53  LKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQ---------FA 103
           ++ +++    +K   +  ++    L++L+NNAG       I+ D + M+           
Sbjct: 59  IQANVADADEVKAMIKEVVSQFGSLDVLVNNAG-------ITRDNLLMRMKEQEWDDVID 111

Query: 104 TNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK 163
           TN  G F         M R        G I+NLSS+       G    Q     A Y   
Sbjct: 112 TNLKGVFNCIQKATPQMLRQRS-----GAIINLSSVVGAVGNPG----Q-----ANYVAT 157

Query: 164 KA--YGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           KA   G +K A    A EL+ R       IT N+V PG I++
Sbjct: 158 KAGVIGLTKSA----ARELASR------GITVNAVAPGFIVS 189

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 68.3 bits (168), Expect = 8e-14
 Identities = 51/211 (24%), Positives = 79/211 (37%), Gaps = 55/211 (26%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIGL  A+ LA     V +  R   A                   +++D++   ++
Sbjct: 22  GGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEVDVTDSDAV 68

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIGHFLLTN 114
                       P+ +L++NAG       +S D   M     +F      N  G F +  
Sbjct: 69  DRAFTAVEEHQGPVEVLVSNAG-------LSADAFLMRMTEEKFEKVINANLTGAFRVAQ 121

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKA--YGQSKLA 172
               +M R        GR++ + S++  +    GI  Q     A Y+  KA   G ++  
Sbjct: 122 RASRSMQRNKF-----GRMIFIGSVSGLW----GIGNQ-----ANYAASKAGVIGMARSI 167

Query: 173 NILHANELSRRFQEEGVNITANSVHPGLIMT 203
               A ELS+       N+TAN V PG I T
Sbjct: 168 ----ARELSKA------NVTANVVAPGYIDT 188

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 68.3 bits (168), Expect = 1e-13
 Identities = 54/217 (24%), Positives = 76/217 (35%), Gaps = 67/217 (30%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIGL  AR  A     V I  R+                      +K D++    +
Sbjct: 28  GGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQV 74

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIGHFLLTN 114
           +   +     + P+ +LI NAG       +++D + M      F     TN  G F +  
Sbjct: 75  EQAYKEIEETHGPVEVLIANAG-------VTKDQLLMRMSEEDFTSVVETNLTGTFRVVK 127

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSI------AHQYTYKGGIRFQKINDRAGYSDKKA--Y 166
                M R  K     GR+V +SS+      A Q               A Y+  KA   
Sbjct: 128 RANRAMLRAKK-----GRVVLISSVVGLLGSAGQ---------------ANYAASKAGLV 167

Query: 167 GQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
           G ++      A EL  R      NIT N V PG + T
Sbjct: 168 GFARSL----ARELGSR------NITFNVVAPGFVDT 194

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 68.7 bits (169), Expect = 1e-13
 Identities = 55/211 (26%), Positives = 79/211 (37%), Gaps = 40/211 (18%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG SGIG   +   A   A++ IA       ANE +Q +  E +  +   L  DLS    
Sbjct: 54  GGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYV--EKEGVKCVLLPGDLSDEQH 111

Query: 63  IKDFAQNFIALNLPLNILINNAGI-MFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDT 119
            KD  Q  +     LNIL+NN            I+ + +E  F  N   +F +T   L  
Sbjct: 112 CKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH 171

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI----- 174
           + +          I+N +SI     Y+G              D   Y  +K A +     
Sbjct: 172 LKQG-------DVIINTASIV---AYEG---------NETLID---YSATKGAIVAFTRS 209

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNL 205
           L +  L ++       I  N V PG I T L
Sbjct: 210 L-SQSLVQK------GIRVNGVAPGPIWTPL 233

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 68.3 bits (168), Expect = 1e-13
 Identities = 46/217 (21%), Positives = 70/217 (32%), Gaps = 47/217 (21%)

Query: 3   AGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           A G  G+G+E AR  A   A V I  A     A E  + + K     +    K  + S  
Sbjct: 28  ASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI-KAKAYKCQVDSYE 86

Query: 62  SIKDFAQNFIALNLPLNILINNAGI--------MFCPYQISEDGIEMQFATNHIGHFLLT 113
           S +   ++ +A    ++  I NAG                S +        +  G F   
Sbjct: 87  SCEKLVKDVVADFGQIDAFIANAGATADSGILDG------SVEAWNHVVQVDLNGTFHCA 140

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLAN 173
             +              G +V  +S++      G I     N     +   +Y  +K A 
Sbjct: 141 KAVGHHFKERGT-----GSLVITASMS------GHI----ANFPQEQT---SYNVAK-AG 181

Query: 174 ILH-----ANELSRRFQEEGVNITANSVHPGLIMTNL 205
            +H     ANE              NS+ PG I T L
Sbjct: 182 CIHMARSLANEWRDF-------ARVNSISPGYIDTGL 211

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 67.5 bits (166), Expect = 2e-13
 Identities = 49/218 (22%), Positives = 74/218 (33%), Gaps = 56/218 (25%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIG   A  LA     + I   +N   A E  +   +   +  V  L  +L    +
Sbjct: 8   GASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEA-RRRGSPLVAVLGANLLEAEA 66

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM-----QF----ATNHIGHFLLT 113
                     +   L+ L+NNAG       I+ D + +      +      N    F  T
Sbjct: 67  ATALVHQAAEVLGGLDTLVNNAG-------ITRDTLLVRMKDEDWEAVLEANLSAVFRTT 119

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSI------AHQYTYKGGIRFQKINDRAGYSDKKA-- 165
              +  M +        GRIVN++S+        Q               A Y   KA  
Sbjct: 120 REAVKLMMKARF-----GRIVNITSVVGILGNPGQ---------------ANYVASKAGL 159

Query: 166 YGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
            G ++      A E ++R       IT N+V PG I T
Sbjct: 160 IGFTRAV----AKEYAQR------GITVNAVAPGFIET 187

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 64.1 bits (157), Expect = 4e-12
 Identities = 51/216 (23%), Positives = 72/216 (33%), Gaps = 42/216 (19%)

Query: 4   GGASGIGLETARVLALRKAHVII------------AARNMAAANEARQLILKEDDTARVD 51
           GGA G+G   A  LA   A + I                     E   L+ K     R  
Sbjct: 17  GGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG--RRCI 74

Query: 52  TLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF----ATNHI 107
           + K+D+   A+++ F          ++I I NAGI      +  +    Q+     TN  
Sbjct: 75  SAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI--STIALLPEVESAQWDEVIGTNLT 132

Query: 108 GHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYG 167
           G F     +   M +        GRIV +SS+                  A Y   K  G
Sbjct: 133 GTFNTIAAVAPGMIKRNY-----GRIVTVSSMLGHSANFAQ---------ASYVSSKW-G 177

Query: 168 QSKLANILHANELSRRFQEEGVNITANSVHPGLIMT 203
              L     A++L          IT N+V PG I T
Sbjct: 178 VIGLTKCA-AHDLVGY------GITVNAVAPGNIET 206

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 55/215 (25%), Positives = 77/215 (35%), Gaps = 44/215 (20%)

Query: 4   GGASGIGLETARVLALRKAHVII----------AARNMAAANEARQLILKEDDTARVDTL 53
           G   GIG   A   A   A V++           A   +AA      I      A  D  
Sbjct: 34  GAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADG- 92

Query: 54  KLDLSSIASIKDFAQNFIALNLP----LNILINNAGI----MFCPYQISEDGIEMQFATN 105
               S++A   D A   I   +     L++L+NNAGI    M      SE+  +   A +
Sbjct: 93  ----SNVAD-WDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMI--ANTSEEEFDAVIAVH 145

Query: 106 HIGHFLLTNLLLDTMNRTAKETG-IEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKK 164
             GHF             +K    ++GRI+N SS A      G    Q       YS  K
Sbjct: 146 LKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVG----Q-----GNYSAAK 196

Query: 165 AYGQSKLANILHANELSRRFQEEGVNITANSVHPG 199
           A G + L  +  A E+ R        +T N++ P 
Sbjct: 197 A-GIATLTLVG-AAEMGRY------GVTVNAIAPS 223

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 45/213 (21%), Positives = 76/213 (35%), Gaps = 50/213 (23%)

Query: 4   GGASGIGLETARVLALRKAHVII---------AARNMAAANEARQLILKEDDTARVDTLK 54
           G   G+G   +   A   A V++            N  AA+     I+K    A      
Sbjct: 15  GAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA------ 68

Query: 55  LDLSSIASIKDFAQNFIALNLP----LNILINNAGI----MFCPYQISEDGIEMQFATNH 106
             ++   ++ D     +   +     ++++INNAGI         +++E   ++    + 
Sbjct: 69  --VADYNNVLD-GDKIVETAVKNFGTVHVIINNAGILRDASM--KKMTEKDYKLVIDVHL 123

Query: 107 IGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAY 166
            G F +T        +        GRIVN SS A  Y   G         +A Y+  K+ 
Sbjct: 124 NGAFAVTKAAWPYFQKQKY-----GRIVNTSSPAGLYGNFG---------QANYASAKS- 168

Query: 167 GQSKLANILHANELSRRFQEEGVNITANSVHPG 199
                A  L A E ++       NI AN++ P 
Sbjct: 169 ALLGFAETL-AKEGAKY------NIKANAIAPL 194

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 47/206 (22%), Positives = 77/206 (37%), Gaps = 42/206 (20%)

Query: 2   LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           + G  +G+G E A+  A   A V++   +   A +    I      A             
Sbjct: 327 ITGAGAGLGKEYAKWFAKYGAKVVVN--DFKDATKTVDEIKAAGGEA--------WPDQH 376

Query: 62  SIKDFAQNFIALNLP----LNILINNAGI----MFCPYQISEDGIEMQFATNHIGHFLLT 113
            +   ++  I   +     ++IL+NNAGI     F   ++S+   +     + IG F L+
Sbjct: 377 DVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSF--AKMSKQEWDSVQQVHLIGTFNLS 434

Query: 114 NLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLAN 173
            L               GRI+N++S +  Y   G         +A YS  KA G   L+ 
Sbjct: 435 RLAWPYFVEKQF-----GRIINITSTSGIYGNFG---------QANYSSSKA-GILGLSK 479

Query: 174 ILHANELSRRFQEEGVNITANSVHPG 199
            + A E ++       NI  N V P 
Sbjct: 480 TM-AIEGAKN------NIKVNIVAPH 498

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 50/213 (23%)

Query: 4   GGASGIGLETARVLALRKAHVII---------AARNMAAANEARQLILKEDDTARVDTLK 54
           G   G+G   A   A R A V++           +  +AA++  + I +    A      
Sbjct: 16  GAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA------ 69

Query: 55  LDLSSIASIKDFAQNFIALNLP----LNILINNAGI----MFCPYQISEDGIEMQFATNH 106
             +++  S++   +  +   L     +++++NNAGI     F   +IS++  ++    + 
Sbjct: 70  --VANYDSVEA-GEKLVKTALDTFGRIDVVVNNAGILRDRSF--SRISDEDWDIIQRVHL 124

Query: 107 IGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAY 166
            G F +T    D M +        GRI+  +S +  Y   G         +A YS  K  
Sbjct: 125 RGSFQVTRAAWDHMKKQNY-----GRIIMTASASGIYGNFG---------QANYSAAKL- 169

Query: 167 GQSKLANILHANELSRRFQEEGVNITANSVHPG 199
           G   LAN L   E  +       NI  N++ P 
Sbjct: 170 GLLGLANTL-VIEGRKN------NIHCNTIAPN 195

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 50/213 (23%), Positives = 74/213 (34%), Gaps = 50/213 (23%)

Query: 4   GGASGIGLETARVLALRKAHVII---------AARNMAAANEARQLILKEDDTARVDTLK 54
           G  +G+G E A + A R A V++            +  AA+     I K    A  D   
Sbjct: 26  GAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADY-- 83

Query: 55  LDLSSIASIKDFAQNFIALNLP----LNILINNAGI----MFCPYQISEDGIEMQFATNH 106
                  S+ D     I   +     ++IL+NNAGI         + SE    +    + 
Sbjct: 84  ------NSVID-GAKVIETAIKAFGRVDILVNNAGILRDRSL--VKTSEQDWNLVNDVHL 134

Query: 107 IGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAY 166
            G F  T      M +        GRI+  SS +  Y   G         +  Y+  K  
Sbjct: 135 KGSFKCTQAAFPYMKKQNY-----GRIIMTSSNSGIY---GNF------GQVNYTAAKM- 179

Query: 167 GQSKLANILHANELSRRFQEEGVNITANSVHPG 199
           G   LAN + A E +R       N+  N + P 
Sbjct: 180 GLIGLANTV-AIEGARN------NVLCNVIVPT 205

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 10/82 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
            G   +G+ +A +LA   A V++  R +  A  A   + K     +V+    + +  AS 
Sbjct: 126 AGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASR 182

Query: 64  KDFAQNFIALNLPLNILINNAG 85
            +  +         + +     
Sbjct: 183 AEAVKG-------AHFVFTAGA 197

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	288
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.91
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.9
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.9
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.9
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.9
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.89
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.89
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.89
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.89
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.89
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.89
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.88
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.88
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.87
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.87
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.86
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.86
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.86
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.86
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.86
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.86
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.85
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.85
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.85
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.85
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.85
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.85
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.85
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.85
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.85
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.85
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.85
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.85
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.84
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.84
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.84
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.84
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.84
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.84
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.83
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.83
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.83
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.83
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.83
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.82
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.82
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.82
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.82
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.82
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.82
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.82
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.82
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.81
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.81
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.81
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.8
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.8
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.8
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.8
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.79
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.78
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.78
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.78
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.77
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.77
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.77
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.76
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.75
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.74
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.74
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.74
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.73
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.71
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.7
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.69
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.66
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.64
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.63
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.6
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.6
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.58
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.55
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.53
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.52
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.49
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.41
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.39
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.34
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.32
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.31
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.24
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.17
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.79
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.71
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.7
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.69
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.53
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.35
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.33
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.32
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.31
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.28
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.21
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.21
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.16
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.12
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.09
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.08
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.07
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.06
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.05
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.04
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.04
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.01
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.01
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.96
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.95
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.95
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.92
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.87
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.86
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.82
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.78
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.77
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.77
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.75
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.71
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.69
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.69
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.67
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.6
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.57
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.5
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.48
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.46
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.44
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.35
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.35
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.32
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.3
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.27
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.26
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.25
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.23
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.22
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.21
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.11
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.09
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.09
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.05
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.04
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.04
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.04
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.0
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.96
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.96
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	96.95
3c85_A	183	Putative glutathione-regulated potassium-efflux S	96.95
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.95
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.94
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.93
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.93
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.89
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.78
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.75
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.7
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.67
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.61
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.48
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.47
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.42
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.39
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.36
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.3
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.29
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.28
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.26
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.2
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.14
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.13
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.08
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.05
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.05
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.02
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	95.99
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.99
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	95.95
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	95.93
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	95.89
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.85
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	95.83
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.78
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.75
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.7
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.7
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	95.69
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.67
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	95.65
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	95.59
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.58
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	95.56
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	95.54
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.51
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.51
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	95.49
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.47
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.44
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.4
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	95.35
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.25
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	95.24
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	95.24
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.23
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.21
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.18
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.17
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.16
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	95.16
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	95.14
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.13
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.12
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.06
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.0
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.92
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	94.85
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	94.84
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	94.83
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	94.83
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	94.79
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	94.79
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	94.71
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	94.66
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	94.62
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.6
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	94.59
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.59
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	94.47
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	94.47
4g65_A	461	TRK system potassium uptake protein TRKA; structur	94.46
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	94.37
1lnq_A	336	MTHK channels, potassium channel related protein;	94.34
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.31
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	94.27
3qha_A	296	Putative oxidoreductase; seattle structural genomi	94.07
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	94.06
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	93.84
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	93.82
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	93.8
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	93.73
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	93.65
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	93.61
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	93.56
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	93.51
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	93.43
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	93.42
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	93.26
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	93.19
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	93.12
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	93.09
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	93.04
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	93.02
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	92.97
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	92.82
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	92.8
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	92.78
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	92.78
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	92.71
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	92.6
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	92.46
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	92.37
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	92.34
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	92.32
3lpm_A	259	Putative methyltransferase; structural genomics, p	92.27
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	92.13
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	92.02

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1e-51  Score=344.36  Aligned_cols=232  Identities=23%  Similarity=0.239  Sum_probs=205.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++...  +.++.++++|++|+++++++++++.+.+|+||+|
T Consensus        11 lVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiL   88 (254)
T 4fn4_A           11 IVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVL   88 (254)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999999999999776  5689999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++++++|+.++|+++|+++|+|.+++     .|+||++||..+..+             
T Consensus        89 VNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-----~G~IVnisS~~g~~~-------------  150 (254)
T 4fn4_A           89 CNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-----KGVIVNTASIAGIRG-------------  150 (254)
T ss_dssp             EECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTCS-------------
T ss_pred             EECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEechhhcCC-------------
Confidence            999997643   34788899999999999999999999999999876     799999999998873             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----H-HHHHHHH-HHhhhcCChHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----V-VMRFLKF-FSFFLWKNVPQGA  231 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~-~~~~~~~-~~~~~~~~~~~~a  231 (288)
                        .+...+|++||+|+.+|+|++|.|++++|  ||||+|+||+++|+|.....    . .....+. .+..++.+|+|+|
T Consensus       151 --~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA  226 (254)
T 4fn4_A          151 --GFAGAPYTVAKHGLIGLTRSIAAHYGDQG--IRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIA  226 (254)
T ss_dssp             --SSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHH
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHH
Confidence              66778999999999999999999999999  99999999999999875431    1 1122222 2446788999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCccC
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +.++||+| +.++|+||+.|. |+|++
T Consensus       227 ~~v~fLaS-d~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          227 NVIVFLAS-DEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             HHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhC-chhcCCcCCEEEeCCCcc
Confidence            99999998 899999999887 66654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1e-51  Score=344.60  Aligned_cols=233  Identities=19%  Similarity=0.255  Sum_probs=209.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++.+.  +.++.++++|++|+++++++++++.+.+|+||+|
T Consensus        13 lVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   90 (255)
T 4g81_D           13 LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDIL   90 (255)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEE
Confidence            69999999999999999999999999999999999999999877  5679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++|+++|+++|+|.++..    +|+||++||..+..+              
T Consensus        91 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~----~G~IVnisS~~~~~~--------------  152 (255)
T 4g81_D           91 INNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS----GGKIINIGSLTSQAA--------------  152 (255)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSB--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC----CCEEEEEeehhhcCC--------------
Confidence            999998754  347888999999999999999999999999976532    689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .+...+|++||+|+.+|+|++|.|++++|  ||||+|+||+++|+|....    .........+|..++.+|+|+|+.+
T Consensus       153 -~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v  229 (255)
T 4g81_D          153 -RPTVAPYTAAKGGIKMLTCSMAAEWAQFN--IQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTA  229 (255)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence             67788999999999999999999999999  9999999999999997643    2233455567888899999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCccC
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +||+| +.++|+||+.|. |+|++
T Consensus       230 ~fL~S-~~a~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          230 IFLSS-KASDYINGQIIYVDGGWL  252 (255)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHhC-chhCCCcCCEEEECCCeE
Confidence            99997 899999999887 67664

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=4.4e-50  Score=337.66  Aligned_cols=226  Identities=21%  Similarity=0.215  Sum_probs=197.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++     +.++.++++|++|+++++++++++.+.+|+||+|
T Consensus        33 lVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           33 VITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             EEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999998888777     5678899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++|+++++++|+|++       .|+||++||..+..+              
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-------~G~IInisS~~~~~~--------------  166 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR-------GSSVVLTGSTAGSTG--------------  166 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGGSC--------------
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCeEEEEeehhhccC--------------
Confidence            999998654  447888999999999999999999999999965       579999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---------HHHHHHHHHHhhhcCChHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---------VVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~  229 (288)
                       .+...+|++||+|+.+|+|++|.|++++|  ||||+|+||+++|++.....         ....+...+|..++.+|+|
T Consensus       167 -~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pee  243 (273)
T 4fgs_A          167 -TPAFSVYAASKAALRSFARNWILDLKDRG--IRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEE  243 (273)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHTTTSC--EEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHH
Confidence             67778999999999999999999999999  99999999999999876541         1223444567888999999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+.++||+| +.++|+||+.|. |+|.
T Consensus       244 iA~~v~FLaS-d~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          244 VAAAALFLAS-DDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHhC-chhcCccCCeEeECcCh
Confidence            9999999998 899999999887 5554

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=5.2e-50  Score=330.56  Aligned_cols=221  Identities=24%  Similarity=0.325  Sum_probs=191.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.+++.        ...++..+++|++|++++++++++    ++++|+|
T Consensus        15 lVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~~----~g~iDiL   82 (242)
T 4b79_A           15 LVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDSQRLQRLFEA----LPRLDVL   82 (242)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCHHHHHHHHHH----CSCCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCHHHHHHHHHh----cCCCCEE
Confidence            6999999999999999999999999999998654321        146789999999999999887754    6899999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||+..+..+.+.++|++.+++|+.++|+++|+++|+|+++      +|+||++||..+..+               .
T Consensus        83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~~---------------~  141 (242)
T 4b79_A           83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR------GGSILNIASMYSTFG---------------S  141 (242)
T ss_dssp             EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------CEEEEEECCGGGTSC---------------C
T ss_pred             EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCeEEEEeeccccCC---------------C
Confidence            9999998777788889999999999999999999999999765      589999999998873               6


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      +...+|++||+|+.+|+|+|+.|++++|  ||||+|+||+++|+|....    .....+.+.+|..++.+|+|+|+.++|
T Consensus       142 ~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~f  219 (242)
T 4b79_A          142 ADRPAYSASKGAIVQLTRSLACEYAAER--IRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAF  219 (242)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            7788999999999999999999999999  9999999999999997654    233445566788889999999999999


Q ss_pred             HhcCCCccCCCceeec-cCccC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+| +.++|+||+.|. |+|+.
T Consensus       220 LaS-d~a~~iTG~~l~VDGG~l  240 (242)
T 4b79_A          220 LCG-PGASFVTGAVLAVDGGYL  240 (242)
T ss_dssp             HTS-GGGTTCCSCEEEESTTGG
T ss_pred             HhC-chhcCccCceEEECccHh
Confidence            998 899999999887 66654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.8e-49  Score=331.17  Aligned_cols=233  Identities=23%  Similarity=0.289  Sum_probs=199.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+..+ ..+++.+.  +.++.++.||++|+++++++++++.+.+|+||+|
T Consensus        11 lVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiL   87 (258)
T 4gkb_A           11 IVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQTIATFGRLDGL   87 (258)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999887654 34455555  4678999999999999999999999999999999


Q ss_pred             EEccccCCC-CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFC-PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||||+... ..+.+.++|++.+++|+.++++++++++|+|+++      +|+||++||..+..+               
T Consensus        88 VNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~~---------------  146 (258)
T 4gkb_A           88 VNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT------RGAIVNISSKTAVTG---------------  146 (258)
T ss_dssp             EECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTHHHHC---------------
T ss_pred             EECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc------CCeEEEEeehhhccC---------------
Confidence            999998654 3367889999999999999999999999999765      589999999998874               


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--------HHHHHHHHHHh-hhcCChHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--------VVMRFLKFFSF-FLWKNVPQG  230 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~  230 (288)
                      .+...+|++||+|+.+|+|++|.|++++|  ||||+|+||+++|+|.....        ....+...+|. .++.+|+|+
T Consensus       147 ~~~~~~Y~asKaav~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peei  224 (258)
T 4gkb_A          147 QGNTSGYCASKGAQLALTREWAVALREHG--VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEI  224 (258)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHH
Confidence            67778999999999999999999999999  99999999999999986541        11222333455 377899999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCccCCCC
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNEMPPS  260 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~~~~~  260 (288)
                      |+.++||+| +.++|+||+.|. |+|++...
T Consensus       225 A~~v~fLaS-~~a~~iTG~~i~VDGG~T~l~  254 (258)
T 4gkb_A          225 ADTAVFLLS-PRASHTTGEWLFVDGGYTHLD  254 (258)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEESTTTTTSC
T ss_pred             HHHHHHHhC-chhcCccCCeEEECCCcchhh
Confidence            999999997 899999999887 77776543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.5e-49  Score=328.40  Aligned_cols=226  Identities=23%  Similarity=0.284  Sum_probs=195.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+..  ++..+++.+.  +.++.++.+|++|+++++++++     ++++|+|
T Consensus        13 lVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~-----~g~iDiL   83 (247)
T 4hp8_A           13 LVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT-----DAGFDIL   83 (247)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST-----TTCCCEE
T ss_pred             EEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH-----hCCCCEE
Confidence            69999999999999999999999999999864  3455666665  5679999999999998877664     4799999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++|+++|+++|+|.++.+    .|+||++||..+..+              
T Consensus        84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~----~G~IVnisS~~~~~g--------------  145 (247)
T 4hp8_A           84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGR----SGKVVNIASLLSFQG--------------  145 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC----CcEEEEEechhhCCC--------------
Confidence            999998754  347888999999999999999999999999987632    589999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .+...+|++||+|+.+|+|++|.||+++|  ||||+|+||+++|+|.....    ....+.+.+|..++.+|+|+|+.+
T Consensus       146 -~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v  222 (247)
T 4hp8_A          146 -GIRVPSYTAAKHGVAGLTKLLANEWAAKG--INVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAA  222 (247)
T ss_dssp             -CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHH
T ss_pred             -CCCChHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence             67778999999999999999999999999  99999999999999976431    223344556888899999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCccC
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +||+| +.++|+||+.|. |+|++
T Consensus       223 ~fLaS-d~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          223 VFLSS-AAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             HHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHhC-chhcCCcCCeEEECcccc
Confidence            99998 899999999887 66654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.8e-48  Score=323.52  Aligned_cols=222  Identities=15%  Similarity=0.167  Sum_probs=195.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+    +  ..++.++++|++|+++++++++++.+.+++||+|
T Consensus         6 lVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            6 IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----E--RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----T--CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h--cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999887665443    3  4578899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++++++|+.++|+++|+++|+|.++      +|+||++||..+..+              
T Consensus        80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~------~G~IInisS~~~~~~--------------  139 (247)
T 3ged_A           80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN------KGRIINIASTRAFQS--------------  139 (247)
T ss_dssp             EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCcEEEEeecccccC--------------
Confidence            999998754  3478889999999999999999999999999875      589999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .+...+|++||+|+.+|+|++|.|+++ +  ||||+|+||+++|++....  .......+|..++.+|+|+|+.++||+
T Consensus       140 -~~~~~~Y~asKaal~~ltk~lA~ela~-~--IrVN~I~PG~i~t~~~~~~--~~~~~~~~Pl~R~g~pediA~~v~fL~  213 (247)
T 3ged_A          140 -EPDSEAYASAKGGIVALTHALAMSLGP-D--VLVNCIAPGWINVTEQQEF--TQEDCAAIPAGKVGTPKDISNMVLFLC  213 (247)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHTT-T--SEEEEEEECSBCCCC---C--CHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEecCcCCCCCcHHH--HHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence             677789999999999999999999997 7  9999999999999998765  344556678889999999999999999


Q ss_pred             cCCCccCCCceeec-cCccC
Q 023054          239 LHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       239 ~~~~~~~~tG~~~~-~~~~~  257 (288)
                      + +  +|+||+.|. |+|.+
T Consensus       214 s-~--~~iTG~~i~VDGG~s  230 (247)
T 3ged_A          214 Q-Q--DFITGETIIVDGGMS  230 (247)
T ss_dssp             H-C--SSCCSCEEEESTTGG
T ss_pred             h-C--CCCCCCeEEECcCHH
Confidence            7 3  699999887 66654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.3e-47  Score=318.89  Aligned_cols=231  Identities=15%  Similarity=0.135  Sum_probs=203.0

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|  |||+++|+.|+++|++|++++|+++.++++.+++.+.+ +.++.++++|++|+++++++++++.+.++++|
T Consensus        10 lVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   88 (256)
T 4fs3_A           10 VIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIGKDVGNID   88 (256)
T ss_dssp             EEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             EEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            6999875  99999999999999999999999999988888877654 45789999999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+...      ..+.+.++|+..+++|+.+++.+++.+.+++.+       +|+||++||..+..+        
T Consensus        89 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~IVnisS~~~~~~--------  153 (256)
T 4fs3_A           89 GVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-------GGSIVATTYLGGEFA--------  153 (256)
T ss_dssp             EEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT-------CEEEEEEECGGGTSC--------
T ss_pred             EEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCEEEEEeccccccC--------
Confidence            99999997643      225566788999999999999999999987754       689999999998763        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~  228 (288)
                             .+....|++||+|+.+|+|+|+.|++++|  ||||+|+||+++|++.....    ....+.+..|..++.+|+
T Consensus       154 -------~~~~~~Y~asKaal~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe  224 (256)
T 4fs3_A          154 -------VQNYNVMGVAKASLEANVKYLALDLGPDN--IRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQV  224 (256)
T ss_dssp             -------CTTTHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             -------cccchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHH
Confidence                   67788999999999999999999999999  99999999999999987653    233455567888899999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+|+.++||+| +.++|+||+.|. |+|+.
T Consensus       225 evA~~v~fL~S-d~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          225 EVGKTAAYLLS-DLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhC-chhcCccCCEEEECcCHH
Confidence            99999999997 899999999887 67664

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=5.6e-47  Score=318.19  Aligned_cols=222  Identities=18%  Similarity=0.170  Sum_probs=189.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.++          .  ..+..++++|+++.++++++++++.+.+|++|+|
T Consensus        15 lVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil   82 (261)
T 4h15_A           15 LITAGTKGAGAATVSLFLELGAQVLTTARARPE----------G--LPEELFVEADLTTKEGCAIVAEATRQRLGGVDVI   82 (261)
T ss_dssp             EESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------T--SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred             EEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------C--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999997542          1  2334578999999999999999999999999999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+...    ..+.+.++|++.+++|+.++++++|+++|+|.+++     .|+||++||..+..+            
T Consensus        83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-----~G~Iv~isS~~~~~~------------  145 (261)
T 4h15_A           83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-----SGVVVHVTSIQRVLP------------  145 (261)
T ss_dssp             EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC------------
T ss_pred             EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-----CceEEEEEehhhccC------------
Confidence            999997542    34778899999999999999999999999999876     799999999998763            


Q ss_pred             CCCCC-ccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH------------HHH----HHHHH
Q 023054          157 RAGYS-DKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV------------VMR----FLKFF  219 (288)
Q Consensus       157 ~~~~~-~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~------------~~~----~~~~~  219 (288)
                         .+ ....|++||+|+.+|+++++.|++++|  ||||+|+||+++|++......            ...    ....+
T Consensus       146 ---~~~~~~~Y~asKaal~~lt~~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (261)
T 4h15_A          146 ---LPESTTAYAAAKAALSTYSKAMSKEVSPKG--VRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGI  220 (261)
T ss_dssp             ---CTTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCC
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCC
Confidence               33 467899999999999999999999999  999999999999998653210            011    11224


Q ss_pred             HhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          220 SFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       220 ~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |..++.+|||+|+.++||+| +.++|+||+.|. |+|+.
T Consensus       221 PlgR~g~peevA~~v~fLaS-~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          221 PLGRPAKPEEVANLIAFLAS-DRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             TTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCS
T ss_pred             CCCCCcCHHHHHHHHHHHhC-chhcCccCcEEEECCcCc
Confidence            66788899999999999997 899999999887 66654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=3.3e-44  Score=300.75  Aligned_cols=228  Identities=24%  Similarity=0.296  Sum_probs=200.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+++.+++..+++.     .+..++.+|++|.++++++++++.+.++++|+|
T Consensus        13 lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A           13 LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999999888877763     347889999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+              
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~--------------  148 (248)
T 3op4_A           88 VNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-----QGRIINVGSVVGTMG--------------  148 (248)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEEcchhhcCC--------------
Confidence            9999987542  3678899999999999999999999999998865     689999999998874              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++......  ........+..++.+|+|+|+.++|
T Consensus       149 -~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~  225 (248)
T 3op4_A          149 -NAGQANYAAAKAGVIGFTKSMAREVASRG--VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAF  225 (248)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred             -CCCChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             66778999999999999999999999999  999999999999999876532  2223334566677899999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |++ +.+.++||+.|. |+|.
T Consensus       226 L~s-~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          226 LAS-PEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHS-GGGTTCCSCEEEESTTS
T ss_pred             HcC-CccCCccCcEEEECCCe
Confidence            997 888999999887 5554

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2e-44  Score=304.94  Aligned_cols=234  Identities=18%  Similarity=0.162  Sum_probs=203.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++....++.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        12 lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   91 (265)
T 3lf2_A           12 VVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASIL   91 (265)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEE
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999999999988876656679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|+|.+++     .|+||++||..+..+              
T Consensus        92 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  152 (265)
T 3lf2_A           92 VNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-----DAAIVCVNSLLASQP--------------  152 (265)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-----TEEEEEEEEGGGTSC--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-----CeEEEEECCcccCCC--------------
Confidence            999998654  33678899999999999999999999999998765     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----------HHHHHHHH---HHhhhc
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----------VVMRFLKF---FSFFLW  224 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----------~~~~~~~~---~~~~~~  224 (288)
                       .++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.....           ........   .|..++
T Consensus       153 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  229 (265)
T 3lf2_A          153 -EPHMVATSAARAGVKNLVRSMAFEFAPKG--VRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRL  229 (265)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSC
T ss_pred             -CCCchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCC
Confidence             67788999999999999999999999999  99999999999998754321           11111111   456677


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      .+|+|+|+.++||++ +.+.++||+.|. |+|+.
T Consensus       230 ~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          230 GKPIEAARAILFLAS-PLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSEEEEESSSCC
T ss_pred             cCHHHHHHHHHHHhC-chhcCcCCCEEEECCCCc
Confidence            899999999999997 889999999887 55543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=4.1e-44  Score=301.81  Aligned_cols=235  Identities=20%  Similarity=0.189  Sum_probs=205.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|+++ +|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         8 lVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (258)
T 3oid_A            8 LVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDETFGRLDV   85 (258)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999997 89999988888888765  567999999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+             
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~-------------  147 (258)
T 3oid_A           86 FVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-----GGHIVSISSLGSIRY-------------  147 (258)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-----CEEEEEEEEGGGTSB-------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEECchhhCCC-------------
Confidence            9999997543  34678889999999999999999999999998865     689999999988763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HHHHHHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                        .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++......    ........+..++.+|+|+|+.
T Consensus       148 --~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  223 (258)
T 3oid_A          148 --LENYTTVGVSKAALEALTRYLAVELSPKQ--IIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDT  223 (258)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHH
T ss_pred             --CCCcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence              66778999999999999999999999999  999999999999999876532    2233344566778899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCccCCCC
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNEMPPS  260 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~~~~~  260 (288)
                      ++||++ +.+.++||+.|. |+|+....
T Consensus       224 v~~L~s-~~~~~itG~~i~vdGG~~~~~  250 (258)
T 3oid_A          224 VEFLVS-SKADMIRGQTIIVDGGRSLLV  250 (258)
T ss_dssp             HHHHTS-STTTTCCSCEEEESTTGGGBC
T ss_pred             HHHHhC-cccCCccCCEEEECCCccCCC
Confidence            999997 788999999887 66654433

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2.7e-44  Score=302.65  Aligned_cols=232  Identities=21%  Similarity=0.261  Sum_probs=203.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        16 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l   93 (256)
T 3gaf_A           16 IVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAALDQFGKITVL   93 (256)
T ss_dssp             EECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999999988888765  5679999999999999999999999999999999


Q ss_pred             EEccccCCCC-CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||||+.... .+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+               
T Consensus        94 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~---------------  153 (256)
T 3gaf_A           94 VNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-----GGAILNISSMAGENT---------------  153 (256)
T ss_dssp             EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTCC---------------
T ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEcCHHHcCC---------------
Confidence            9999987542 2677889999999999999999999999998865     689999999998763               


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      .++...|++||+++++|+++++.+++++|  |+||+|+||+++|++....   ..........+..++.+|+|+|+.++|
T Consensus       154 ~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~  231 (256)
T 3gaf_A          154 NVRMASYGSSKAAVNHLTRNIAFDVGPMG--IRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALF  231 (256)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            66778999999999999999999999999  9999999999999986432   112223333466677899999999999


Q ss_pred             HhcCCCccCCCceeec-cCccC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |++ +...++||+.|. |+|..
T Consensus       232 L~s-~~~~~itG~~i~vdgG~~  252 (256)
T 3gaf_A          232 LCS-PAAAWISGQVLTVSGGGV  252 (256)
T ss_dssp             HHS-GGGTTCCSCEEEESTTSC
T ss_pred             HcC-CcccCccCCEEEECCCcc
Confidence            997 888999999887 55543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=5.6e-44  Score=302.98  Aligned_cols=231  Identities=19%  Similarity=0.275  Sum_probs=204.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        30 lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (271)
T 4ibo_A           30 LVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLDEQGIDVDIL  107 (271)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            69999999999999999999999999999999999998888765  4679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .|+||++||..+..+              
T Consensus       108 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iV~isS~~~~~~--------------  168 (271)
T 4ibo_A          108 VNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-----YGKIVNIGSLTSELA--------------  168 (271)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSB--------------
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEccHHhCCC--------------
Confidence            999998754  23678899999999999999999999999998875     689999999988763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++....    ..........+..++.+|+|+|+.+
T Consensus       169 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v  245 (271)
T 4ibo_A          169 -RATVAPYTVAKGGIKMLTRAMAAEWAQYG--IQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTA  245 (271)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             66778999999999999999999999999  9999999999999987643    1222334445677788999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +.+.++||+.|. |+|.
T Consensus       246 ~~L~s-~~~~~itG~~i~vdGG~  267 (271)
T 4ibo_A          246 VFLSA-SASDYVNGQIIYVDGGM  267 (271)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHhC-ccccCCCCcEEEECCCe
Confidence            99997 788999999887 5554

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=7.1e-44  Score=301.06  Aligned_cols=235  Identities=23%  Similarity=0.274  Sum_probs=204.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...+ ..++.++.+|++|.++++++++++.+.++++|+|
T Consensus        14 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   92 (262)
T 3pk0_A           14 VVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVV   92 (262)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            699999999999999999999999999999999999888887653 3679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .++||++||..+...              
T Consensus        93 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~--------------  153 (262)
T 3pk0_A           93 CANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-----SGRVVLTSSITGPIT--------------  153 (262)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-----SCEEEEECCSBTTTB--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEechhhccC--------------
Confidence            999998754  34678899999999999999999999999998875     689999999987521              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      +.++...|++||++++.|+++++.+++++|  |+||+|+||++.|++.....  ....+....+..++.+|+|+|+.++|
T Consensus       154 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~  231 (262)
T 3pk0_A          154 GYPGWSHYGATKAAQLGFMRTAAIELAPHK--ITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAF  231 (262)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHhhC--cEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            356778999999999999999999999999  99999999999999765432  22223334566777899999999999


Q ss_pred             HhcCCCccCCCceeec-cCccCC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      |++ +.+.++||+.|. |+|+..
T Consensus       232 L~s-~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          232 LAT-KEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHS-GGGTTCCSCEEEESTTTTC
T ss_pred             HhC-ccccCCcCCEEEECCCeec
Confidence            997 889999999887 666543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.2e-44  Score=304.47  Aligned_cols=237  Identities=22%  Similarity=0.199  Sum_probs=203.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        12 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   89 (280)
T 3tox_A           12 IVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVRRFGGLDTA   89 (280)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999999988888654  5679999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.++++++++++|.|.+++     .|+||++||..+...             
T Consensus        90 vnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  151 (280)
T 3tox_A           90 FNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-----GGSLTFTSSFVGHTA-------------  151 (280)
T ss_dssp             EECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCSBTTTB-------------
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEEcChhhCcC-------------
Confidence            999997633   33678899999999999999999999999998865     689999999987621             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC-C----h-HHHHHHHHHHhhhcCChHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH-S----A-VVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~-~----~-~~~~~~~~~~~~~~~~~~~~a  231 (288)
                       +.++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++... .    + .........+..++.+|+|+|
T Consensus       152 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA  228 (280)
T 3tox_A          152 -GFAGVAPYAASKAGLIGLVQALAVELGARG--IRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIA  228 (280)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHH
Confidence             356778999999999999999999999999  999999999999998654 1    1 112222334556778999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCccCCCCc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNEMPPSA  261 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~~~~~~  261 (288)
                      +.++||++ +.+.++||+.|. |+|......
T Consensus       229 ~~v~~L~s-~~a~~itG~~i~vdGG~~~~~~  258 (280)
T 3tox_A          229 EAALYLAS-DGASFVTGAALLADGGASVTKA  258 (280)
T ss_dssp             HHHHHHHS-GGGTTCCSCEEEESTTGGGCC-
T ss_pred             HHHHHHhC-ccccCCcCcEEEECCCcccccc
Confidence            99999997 788999999887 555544433

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=6.6e-44  Score=301.90  Aligned_cols=233  Identities=22%  Similarity=0.287  Sum_probs=202.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        24 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l  102 (266)
T 4egf_A           24 LITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVL  102 (266)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999999998888886632 4679999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.++++++++++|.|.+++.    .|+||++||..+..+              
T Consensus       103 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~g~iv~isS~~~~~~--------------  164 (266)
T 4egf_A          103 VNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE----GGAIITVASAAALAP--------------  164 (266)
T ss_dssp             EEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CeEEEEEcchhhccC--------------
Confidence            9999987542  36778899999999999999999999999987532    479999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++....    ..........+..++.+|+|+|+.+
T Consensus       165 -~~~~~~Y~asK~a~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v  241 (266)
T 4egf_A          165 -LPDHYAYCTSKAGLVMATKVLARELGPHG--IRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAV  241 (266)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             -CCCChHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             66778999999999999999999999999  9999999999999985432    1122233345666778999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +.+.++||+.|. |+|+
T Consensus       242 ~~L~s-~~~~~itG~~i~vdGG~  263 (266)
T 4egf_A          242 VWLAS-DAASMINGVDIPVDGGY  263 (266)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHhC-chhcCccCcEEEECCCc
Confidence            99997 888999999887 5554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=8.7e-44  Score=301.65  Aligned_cols=231  Identities=24%  Similarity=0.274  Sum_probs=202.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        32 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  109 (270)
T 3ftp_A           32 IVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTLKEFGALNVL  109 (270)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999999888888766  4678899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .|+||++||..+..+              
T Consensus       110 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  170 (270)
T 3ftp_A          110 VNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-----GGRIVNITSVVGSAG--------------  170 (270)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEECchhhCCC--------------
Confidence            999998754  33677889999999999999999999999998865     689999999998863              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++......  ........+..++.+|+|+|+.++|
T Consensus       171 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  247 (270)
T 3ftp_A          171 -NPGQVNYAAAKAGVAGMTRALAREIGSRG--ITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAF  247 (270)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence             66788999999999999999999999999  999999999999998754421  1122223455667799999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |++ +...++||+.|. ++|.
T Consensus       248 L~s-~~~~~itG~~i~vdGG~  267 (270)
T 3ftp_A          248 LAS-PQAGYITGTTLHVNGGM  267 (270)
T ss_dssp             HHS-GGGTTCCSCEEEESTTS
T ss_pred             HhC-CCcCCccCcEEEECCCc
Confidence            997 888999999887 5554

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=2.2e-43  Score=295.36  Aligned_cols=231  Identities=22%  Similarity=0.259  Sum_probs=200.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|+++++ +.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         8 lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   85 (246)
T 3osu_A            8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQFGSLDV   85 (246)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999887 567777777777665  567899999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+             
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  147 (246)
T 3osu_A           86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-----SGAIINLSSVVGAVG-------------  147 (246)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC-------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEEcchhhcCC-------------
Confidence            9999998754  34677889999999999999999999999998865     689999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++......  ........+..++.+|+|+|+.++
T Consensus       148 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~  223 (246)
T 3osu_A          148 --NPGQANYVATKAGVIGLTKSAARELASRG--ITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVA  223 (246)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              56778999999999999999999999999  999999999999999876522  222333346667789999999999


Q ss_pred             HHhcCCCccCCCceeec-cCcc
Q 023054          236 YVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ||++ +...++||+.|. ++|.
T Consensus       224 ~l~s-~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          224 FLAS-DKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHTS-GGGTTCCSCEEEESTTS
T ss_pred             HHhC-ccccCCCCCEEEeCCCc
Confidence            9997 788999999887 5543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.5e-43  Score=300.07  Aligned_cols=231  Identities=24%  Similarity=0.320  Sum_probs=202.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++| +.+..+++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        32 lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~  109 (269)
T 4dmm_A           32 LVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAVIERWGRLDV  109 (269)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999998 677777777777665  567999999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+....  .+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+             
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  171 (269)
T 4dmm_A          110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-----SGRIINIASVVGEMG-------------  171 (269)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCHHHHHC-------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECchhhcCC-------------
Confidence            99999987542  3677899999999999999999999999998865     689999999998773             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                        .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++..... ........+..++.+|+|+|+.++||
T Consensus       172 --~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~-~~~~~~~~p~~r~~~~~dvA~~v~~l  246 (269)
T 4dmm_A          172 --NPGQANYSAAKAGVIGLTKTVAKELASRG--ITVNAVAPGFIATDMTSELA-AEKLLEVIPLGRYGEAAEVAGVVRFL  246 (269)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBTTSCSCHHH-HHHHGGGCTTSSCBCHHHHHHHHHHH
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEECCCcCccccccc-HHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence              66778999999999999999999999999  99999999999999986542 23333445667788999999999999


Q ss_pred             hcCCCccCCCceeec-cCcc
Q 023054          238 ALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++++.+.++||+.|. |+|.
T Consensus       247 ~s~~~~~~itG~~i~vdGG~  266 (269)
T 4dmm_A          247 AADPAAAYITGQVINIDGGL  266 (269)
T ss_dssp             HHCGGGGGCCSCEEEESTTS
T ss_pred             hCCcccCCCcCCEEEECCCe
Confidence            985588999999887 5554

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-43  Score=302.80  Aligned_cols=233  Identities=23%  Similarity=0.230  Sum_probs=199.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        32 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  109 (283)
T 3v8b_A           32 LITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLVLKFGHLDIV  109 (283)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999999999988888654  5679999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+...             
T Consensus       110 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~Iv~isS~~~~~~-------------  171 (283)
T 3v8b_A          110 VANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-----GGAIVVVSSINGTRT-------------  171 (283)
T ss_dssp             EECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCSBTTTB-------------
T ss_pred             EECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CceEEEEcChhhccC-------------
Confidence            999998632   34678889999999999999999999999998875     689999999987641             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHH---------HHHHHh--hhcCC
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF---------LKFFSF--FLWKN  226 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~---------~~~~~~--~~~~~  226 (288)
                      .+.++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++..........         ....+.  .+..+
T Consensus       172 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~  249 (283)
T 3v8b_A          172 FTTPGATAYTATKAAQVAIVQQLALELGKHH--IRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGR  249 (283)
T ss_dssp             CCSTTCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCC
Confidence            0245678899999999999999999999999  9999999999999998654111111         111233  66779


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+|+.++||++ +.+.++||+.|. |+|.
T Consensus       250 pedvA~~v~fL~s-~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          250 SEDVAELIRFLVS-ERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             HHHHHHHHHHHTS-GGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHHHHcC-ccccCCcCCEEEECcCc
Confidence            9999999999997 889999999887 5553

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.9e-43  Score=299.52  Aligned_cols=235  Identities=22%  Similarity=0.174  Sum_probs=203.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...+. ..++.++.+|++|.++++++++++.+.++++|+
T Consensus        15 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   94 (281)
T 3svt_A           15 LVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHG   94 (281)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999999999999999888876532 237999999999999999999999999999999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ||||||+...   ..+.+.++|++.+++|+.++++++++++|.|.+++     .|+||++||..+..+            
T Consensus        95 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------------  157 (281)
T 3svt_A           95 VVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-----GGSFVGISSIAASNT------------  157 (281)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CEEEEEECCHHHHSC------------
T ss_pred             EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEeCHHHcCC------------
Confidence            9999997432   34677889999999999999999999999998865     689999999998763            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                         .++...|++||+++++|+++++.+++++|  |+||+|+||+++|++....    .....+....+..++.+|+|+|+
T Consensus       158 ---~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (281)
T 3svt_A          158 ---HRWFGAYGVTKSAVDHLMQLAADELGASW--VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVAN  232 (281)
T ss_dssp             ---CTTCTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHH
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence               56678999999999999999999999999  9999999999999987642    12223334456677789999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCccCC
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      .++||++ +...++||+.|. ++|...
T Consensus       233 ~~~~l~s-~~~~~itG~~~~vdgG~~~  258 (281)
T 3svt_A          233 MAMFLLS-DAASFVTGQVINVDGGQML  258 (281)
T ss_dssp             HHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhC-cccCCCCCCEEEeCCChhc
Confidence            9999997 788999999887 555543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.8e-43  Score=296.10  Aligned_cols=230  Identities=26%  Similarity=0.302  Sum_probs=199.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        10 lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A           10 LVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            69999999999999999999999999999999888877776     4678999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++.    .|+||++||..+..+              
T Consensus        85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~--------------  146 (247)
T 3rwb_A           85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK----AGRVISIASNTFFAG--------------  146 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCTHHHHT--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC----CcEEEEECchhhccC--------------
Confidence            999998754  236788999999999999999999999999987631    489999999988763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHH-HHhhhcCChHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKF-FSFFLWKNVPQGAATTC  235 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~-~~~~~~~~~~~~a~~~~  235 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++......  ....... .+..+..+|+|+|+.++
T Consensus       147 -~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~  223 (247)
T 3rwb_A          147 -TPNMAAYVAAKGGVIGFTRALATELGKYN--ITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVS  223 (247)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHH
T ss_pred             -CCCchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHH
Confidence             66778999999999999999999999999  999999999999997654321  1122222 45566789999999999


Q ss_pred             HHhcCCCccCCCceeec-cCccC
Q 023054          236 YVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ||++ +.++++||+.|. |+|..
T Consensus       224 ~L~s-~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          224 FLAS-DDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTSS
T ss_pred             HHhC-ccccCCCCCEEEECCCcc
Confidence            9997 888999999887 55543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-43  Score=298.51  Aligned_cols=230  Identities=19%  Similarity=0.233  Sum_probs=200.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        15 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   92 (264)
T 3ucx_A           15 VISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMKAYGRVDVV   92 (264)
T ss_dssp             EEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEE
T ss_pred             EEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            69999999999999999999999999999999999998888765  5679999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.++++++++++|.|.++      +|+||++||..+..+             
T Consensus        93 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~-------------  153 (264)
T 3ucx_A           93 INNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES------KGAVVNVNSMVVRHS-------------  153 (264)
T ss_dssp             EECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH------TCEEEEECCGGGGCC-------------
T ss_pred             EECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEECcchhccC-------------
Confidence            999988532   3367788999999999999999999999999875      489999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-------------HHHHHHHHHhhhc
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-------------VMRFLKFFSFFLW  224 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~~~~~  224 (288)
                        .++...|++||+++++|+++++.+++++|  |+||+|+||++.|++......             ...+....+..++
T Consensus       154 --~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  229 (264)
T 3ucx_A          154 --QAKYGAYKMAKSALLAMSQTLATELGEKG--IRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRL  229 (264)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSC
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccC
Confidence              66778999999999999999999999999  999999999999998654310             1111122345667


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .+|+|+|+.++||++ +.+.++||+.|. |+|.
T Consensus       230 ~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~  261 (264)
T 3ucx_A          230 PTEDEVASAILFMAS-DLASGITGQALDVNCGE  261 (264)
T ss_dssp             CBHHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             CCHHHHHHHHHHHcC-ccccCCCCCEEEECCCc
Confidence            799999999999997 788999999887 5554

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=3.7e-43  Score=295.89  Aligned_cols=233  Identities=19%  Similarity=0.210  Sum_probs=200.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        10 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   87 (257)
T 3imf_A           10 IITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDIL   87 (257)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999999888887654  4679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.++..    .|+||++||..+..+              
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~--------------  149 (257)
T 3imf_A           88 INNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI----KGNIINMVATYAWDA--------------  149 (257)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----CCEEEEECCGGGGSC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC----CcEEEEECchhhccC--------------
Confidence            999997654  336788899999999999999999999999955421    589999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhc-ccCCceEEEEeeCCcccCCCCCCC-----hHHHHHHHHHHhhhcCChHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQ-EEGVNITANSVHPGLIMTNLFKHS-----AVVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                       .++...|++||+|+++|+++++.|++ +.|  |+||+|+||++.|++....     ..........+..++.+|+|+|+
T Consensus       150 -~~~~~~Y~asKaa~~~l~~~la~e~~~~~g--Irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  226 (257)
T 3imf_A          150 -GPGVIHSAAAKAGVLAMTKTLAVEWGRKYG--IRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAG  226 (257)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHhccccC--eEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence             56778999999999999999999998 678  9999999999999975432     11223334456677789999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCccC
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      .++||++ +.+.++||+.|. |+|..
T Consensus       227 ~v~~L~s-~~~~~itG~~i~vdGG~~  251 (257)
T 3imf_A          227 LAYYLCS-DEAAYINGTCMTMDGGQH  251 (257)
T ss_dssp             HHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHcC-chhcCccCCEEEECCCcc
Confidence            9999997 788999999887 55543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=3.7e-43  Score=298.71  Aligned_cols=235  Identities=20%  Similarity=0.199  Sum_probs=202.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        36 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l  113 (276)
T 3r1i_A           36 LITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIA  113 (276)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999998888888765  4678999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.++++++++++|.|.+++.    +++||++||..+....             
T Consensus       114 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~----~g~iv~isS~~~~~~~-------------  176 (276)
T 3r1i_A          114 VCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL----GGTIITTASMSGHIIN-------------  176 (276)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSCC-------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CcEEEEECchHhcccC-------------
Confidence            9999987542  36778899999999999999999999999987641    3899999999876531             


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-HHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-VMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                      ..++...|++||+|++.|+++++.+++++|  |+||+|+||+++|++...... ...+....+..++.+|+|+|+.++||
T Consensus       177 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL  254 (276)
T 3r1i_A          177 IPQQVSHYCTSKAAVVHLTKAMAVELAPHQ--IRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYL  254 (276)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            012557899999999999999999999999  999999999999999875532 22233345667788999999999999


Q ss_pred             hcCCCccCCCceeec-cCccC
Q 023054          238 ALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ++ +.+.++||+.|. |+|+.
T Consensus       255 ~s-~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          255 AS-AASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HS-GGGTTCCSCEEEESTTTT
T ss_pred             cC-ccccCccCcEEEECcCcc
Confidence            97 889999999887 66654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2.5e-43  Score=300.28  Aligned_cols=232  Identities=24%  Similarity=0.237  Sum_probs=201.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        28 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l  105 (279)
T 3sju_A           28 FVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGIL  105 (279)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            69999999999999999999999999999999999988888765  5679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHH--HHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLD--TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|  .|.+++     .|+||++||..+..+            
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-----~g~iV~isS~~~~~~------------  168 (279)
T 3sju_A          106 VNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-----WGRIVNIASTGGKQG------------  168 (279)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-----CEEEEEECCGGGTSC------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-----CcEEEEECChhhccC------------
Confidence            999998754  23677889999999999999999999999  577654     589999999998763            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------------hHHHHHHHHHHhhh
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------------AVVMRFLKFFSFFL  223 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~~  223 (288)
                         .++...|++||+|+++|+++++.++++.|  |+||+|+||+++|++....             .....+....+..+
T Consensus       169 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  243 (279)
T 3sju_A          169 ---VMYAAPYTASKHGVVGFTKSVGFELAKTG--ITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGR  243 (279)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSS
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCC
Confidence               66778999999999999999999999999  9999999999999986432             11122223345667


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +.+|+|+|+.++||++ +.+.++||+.|. |+|..
T Consensus       244 ~~~pedvA~~v~~L~s-~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          244 YSTPEEVAGLVGYLVT-DAAASITAQALNVCGGLG  277 (279)
T ss_dssp             CBCHHHHHHHHHHHTS-SGGGGCCSCEEEESTTCC
T ss_pred             CCCHHHHHHHHHHHhC-ccccCcCCcEEEECCCcc
Confidence            7899999999999997 788999999887 55543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=5.5e-43  Score=297.05  Aligned_cols=227  Identities=24%  Similarity=0.282  Sum_probs=198.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        15 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           15 IITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888877766     4578899999999999999999999999999999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+...    ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+            
T Consensus        90 v~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~------------  152 (271)
T 3tzq_B           90 DNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-----GGAIVNISSATAHAA------------  152 (271)
T ss_dssp             EECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTSB------------
T ss_pred             EECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEECCHHHcCC------------
Confidence            999998733    23667889999999999999999999999998865     689999999998763            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHHHhhhcCChHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                         .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++....   .....+....+..++.+|+|+|+.
T Consensus       153 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~  227 (271)
T 3tzq_B          153 ---YDMSTAYACTKAAIETLTRYVATQYGRHG--VRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAEL  227 (271)
T ss_dssp             ---CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence               66778999999999999999999999999  9999999999999987632   112223333456677899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      ++||++ +.+.++||+.|. |+|
T Consensus       228 v~~L~s-~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          228 VCFLAS-DRAAFITGQVIAADSG  249 (271)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESTT
T ss_pred             HHHHhC-cccCCcCCCEEEECCC
Confidence            999997 788999999887 555

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=4.6e-43  Score=299.83  Aligned_cols=231  Identities=19%  Similarity=0.213  Sum_probs=197.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC----------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN----------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |||||++|||+++|+.|+++|++|++++|+                .+.+++..+++...  +.++.++.+|++|.++++
T Consensus        15 lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~   92 (286)
T 3uve_A           15 FVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVDVRDYDALK   92 (286)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHH
T ss_pred             EEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcCCCCHHHHH
Confidence            699999999999999999999999999887                77777777777655  567999999999999999


Q ss_pred             HHHHHHHhcCCCcceEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc
Q 023054           65 DFAQNFIALNLPLNILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH  141 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  141 (288)
                      ++++++.+.++++|+||||||+...   ..+.+.++|++++++|+.++++++++++|+|.+++.    .|+||++||..+
T Consensus        93 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~  168 (286)
T 3uve_A           93 AAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR----GGSIILTSSVGG  168 (286)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGG
T ss_pred             HHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC----CcEEEEECchhh
Confidence            9999999999999999999998654   235678899999999999999999999999987532    479999999998


Q ss_pred             cccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHH-------
Q 023054          142 QYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR-------  214 (288)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~-------  214 (288)
                      ..+               .++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.........       
T Consensus       169 ~~~---------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  231 (286)
T 3uve_A          169 LKA---------------YPHTGHYVAAKHGVVGLMRAFGVELGQHM--IRVNSVHPTHVKTPMLHNEGTFKMFRPDLEN  231 (286)
T ss_dssp             TSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSTTTSSHHHHHHHCTTSSS
T ss_pred             ccC---------------CCCccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCCcccccchhhhccccccc
Confidence            763               66778999999999999999999999999  999999999999999864311110       


Q ss_pred             -----HH------HHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          215 -----FL------KFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       215 -----~~------~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                           ..      ...+ .++.+|+|+|+.++||++ +.+.++||+.|. |+|.
T Consensus       232 ~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s-~~a~~itG~~i~vdGG~  283 (286)
T 3uve_A          232 PGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFAS-DEARYITGVTLPIDAGS  283 (286)
T ss_dssp             CCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             cchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcC-ccccCCcCCEEeECCcc
Confidence                 00      0112 456799999999999997 889999999887 5554

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=2.1e-43  Score=298.62  Aligned_cols=228  Identities=23%  Similarity=0.239  Sum_probs=193.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        31 lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           31 LVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999888776655     4679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .|+||++||..+..+              
T Consensus       106 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~Iv~isS~~~~~~--------------  166 (266)
T 3grp_A          106 VNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-----YGRIINITSIVGVVG--------------  166 (266)
T ss_dssp             EECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCC-------------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CcEEEEECCHHHcCC--------------
Confidence            999998754  23567789999999999999999999999998865     689999999988763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++......  ...+....+..++.+|+|+|+.++|
T Consensus       167 -~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~  243 (266)
T 3grp_A          167 -NPGQTNYCAAKAGLIGFSKALAQEIASRN--ITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVY  243 (266)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             56778999999999999999999999999  999999999999998765421  2223334566777899999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |++ +.+.++||+.|. |+|+
T Consensus       244 L~s-~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          244 LAS-DEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHS-GGGTTCCSCEEEESTTC
T ss_pred             HhC-ccccCccCCEEEECCCe
Confidence            997 788999999887 5554

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=2.9e-43  Score=301.63  Aligned_cols=235  Identities=22%  Similarity=0.285  Sum_probs=203.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...+ ..++.++.+|++|.++++++++++.+.++++|+|
T Consensus        45 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  123 (293)
T 3rih_A           45 LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVDAFGALDVV  123 (293)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999999988888886653 3579999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .++||++||..+...              
T Consensus       124 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iV~isS~~~~~~--------------  184 (293)
T 3rih_A          124 CANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-----RGRVILTSSITGPVT--------------  184 (293)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-----SCEEEEECCSBTTTB--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEEeChhhccC--------------
Confidence            999998754  33678899999999999999999999999998875     689999999987521              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      +.++...|++||+++++|+++++.+++++|  |+||+|+||++.|++.....  .........+..++.+|+|+|+.++|
T Consensus       185 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~f  262 (293)
T 3rih_A          185 GYPGWSHYGASKAAQLGFMRTAAIELAPRG--VTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAF  262 (293)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            356778999999999999999999999999  99999999999998765432  12223334566777899999999999


Q ss_pred             HhcCCCccCCCceeec-cCccCC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      |++ +.+.++||+.|. |+|...
T Consensus       263 L~s-~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          263 LAT-DEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHS-GGGTTCCSCEEEESTTTTC
T ss_pred             HhC-ccccCCCCCEEEECCCccC
Confidence            997 889999999887 666543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=5e-43  Score=300.31  Aligned_cols=258  Identities=36%  Similarity=0.511  Sum_probs=205.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|.++++++++++    +++|+|
T Consensus        20 lVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~----~~iD~l   90 (291)
T 3rd5_A           20 VITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGV----SGADVL   90 (291)
T ss_dssp             EEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTC----CCEEEE
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhc----CCCCEE
Confidence            69999999999999999999999999999998887766554     467999999999999999988765    689999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC-CCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN-DRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~-~~~~  159 (288)
                      |||||+..+....+.++|++++++|+.++++++++++|.|.         .+||++||..+..+.+   ...++. ....
T Consensus        91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~---------~riv~isS~~~~~~~~---~~~~~~~~~~~  158 (291)
T 3rd5_A           91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLT---------DRVVTVSSMAHWPGRI---NLEDLNWRSRR  158 (291)
T ss_dssp             EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE---------EEEEEECCGGGTTCCC---CSSCTTCSSSC
T ss_pred             EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hheeEeechhhccCCC---CcccccccccC
Confidence            99999987666778899999999999999999999999884         3899999998876422   222222 2245


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                      +++...|++||++++.|++.+++++++++.+|+||+|+||+++|++......  ..............+|+++|+.++|+
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l  238 (291)
T 3rd5_A          159 YSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYA  238 (291)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            6778899999999999999999999998777999999999999999876421  11111222223334699999999999


Q ss_pred             hcCCCccCCCceeec-cCccC------CCCccccCHHHHHHHHHHHHHHHHh
Q 023054          238 ALHPNLKGVTGKYFL-DCNEM------PPSALARDETLAKKLWDFSNKMINS  282 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  282 (288)
                      ++ +  .+++|++|. ++|+.      .......+++.++++|++++++++.
T Consensus       239 ~~-~--~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  287 (291)
T 3rd5_A          239 AS-Q--DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKT  287 (291)
T ss_dssp             HH-S--CCCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTC
T ss_pred             Hc-C--CCCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHcc
Confidence            98 4  389999998 44432      3356788999999999999999864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=4.2e-43  Score=298.23  Aligned_cols=229  Identities=21%  Similarity=0.234  Sum_probs=199.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+. +++|+|
T Consensus        37 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~l  113 (275)
T 4imr_A           37 LVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAEAI-APVDIL  113 (275)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHHHH-SCCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHh-CCCCEE
Confidence            69999999999999999999999999999999888888888765  567999999999999999999999887 899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+              
T Consensus       114 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~Iv~isS~~~~~~--------------  174 (275)
T 4imr_A          114 VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-----WGRVVSIGSINQLRP--------------  174 (275)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEECCHHhCCC--------------
Confidence            999998654  33678899999999999999999999999998865     689999999988752              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----HHHHHHHHH-HhhhcCChHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----VVMRFLKFF-SFFLWKNVPQGAA  232 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~a~  232 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++.....     ......... +..++.+|+|+|+
T Consensus       175 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  251 (275)
T 4imr_A          175 -KSVVTAYAATKAAQHNLIQSQARDFAGDN--VLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVG  251 (275)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHH
T ss_pred             -CCCchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHH
Confidence             55667799999999999999999999999  99999999999999865431     112233333 6667789999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCc
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      .++||++ +.++++||+.|. |+|
T Consensus       252 ~v~fL~s-~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          252 AALFLAS-EACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHHHS-GGGTTCCSCEEEESSC
T ss_pred             HHHHHcC-cccCCCCCCEEEeCCC
Confidence            9999997 888999999887 444

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=5e-43  Score=298.21  Aligned_cols=232  Identities=22%  Similarity=0.248  Sum_probs=201.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        31 lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l  109 (277)
T 4fc7_A           31 FITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDIL  109 (277)
T ss_dssp             EEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999999888888876543 4679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .|+||++||..+..+              
T Consensus       110 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  170 (277)
T 4fc7_A          110 INCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-----GGVIVNITATLGNRG--------------  170 (277)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-----CEEEEEECCSHHHHT--------------
T ss_pred             EECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEECchhhCCC--------------
Confidence            999997644  33678899999999999999999999999998765     689999999998863              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC-----ChHHHHHHHHHHhhhcCChHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH-----SAVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++...     ...........+..++.+|+|+|+.
T Consensus       171 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  247 (277)
T 4fc7_A          171 -QALQVHAGSAKAAVDAMTRHLAVEWGPQN--IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHS  247 (277)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHH
Confidence             66778999999999999999999999999  999999999999985321     1122233344566778899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++||++ +.++++||+.|. |+|.
T Consensus       248 v~fL~s-~~~~~itG~~i~vdGG~  270 (277)
T 4fc7_A          248 VLYLAS-PLASYVTGAVLVADGGA  270 (277)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESTTH
T ss_pred             HHHHcC-CccCCcCCCEEEECCCc
Confidence            999997 889999999887 5543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.2e-42  Score=293.13  Aligned_cols=229  Identities=20%  Similarity=0.217  Sum_probs=198.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        12 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A           12 LITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999988887776     4568999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++.    .|+||++||..+..+              
T Consensus        87 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~--------------  148 (259)
T 4e6p_A           87 VNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGR----GGKIINMASQAGRRG--------------  148 (259)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CeEEEEECChhhccC--------------
Confidence            999998654  336778999999999999999999999999987532    479999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------------hHHHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------------AVVMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~~~~  225 (288)
                       .++...|++||+++++|+++++.+++++|  |+||+|+||++.|++....             ..........+..++.
T Consensus       149 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  225 (259)
T 4e6p_A          149 -EALVAIYCATKAAVISLTQSAGLDLIKHR--INVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMG  225 (259)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCB
T ss_pred             -CCCChHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCc
Confidence             66778999999999999999999999999  9999999999999986532             1112233345667788


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+|+|+.++||++ +...++||+.|. ++|.
T Consensus       226 ~~~dva~~v~~L~s-~~~~~itG~~i~vdgG~  256 (259)
T 4e6p_A          226 TAEDLTGMAIFLAS-AESDYIVSQTYNVDGGN  256 (259)
T ss_dssp             CTHHHHHHHHHTTS-GGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhC-CccCCCCCCEEEECcCh
Confidence            99999999999997 888999999887 5543

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.4e-43  Score=297.02  Aligned_cols=232  Identities=23%  Similarity=0.247  Sum_probs=194.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++| +.+.+++..+++.... +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        29 lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  107 (281)
T 3v2h_A           29 VITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVADRFGGADI  107 (281)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            69999999999999999999999999999 6677777777776543 467999999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+++     .|+||++||..+..+             
T Consensus       108 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  169 (281)
T 3v2h_A          108 LVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-----WGRIINIASAHGLVA-------------  169 (281)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEECCcccccC-------------
Confidence            99999986542  3667889999999999999999999999998875     689999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH--------------HHHHHHHhhh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM--------------RFLKFFSFFL  223 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~--------------~~~~~~~~~~  223 (288)
                        .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++........              .+....+..+
T Consensus       170 --~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  245 (281)
T 3v2h_A          170 --SPFKSAYVAAKHGIMGLTKTVALEVAESG--VTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKK  245 (281)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC----------------------------CCTTCS
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCC
Confidence              56778999999999999999999999999  99999999999999876431100              0112235567


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.+|+|+|+.++||++ +.+.++||+.|. |+|+
T Consensus       246 ~~~~edvA~~v~~L~s-~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          246 FITVEQVASLALYLAG-DDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             CBCHHHHHHHHHHHHS-SGGGGCCSCEEEESTTG
T ss_pred             ccCHHHHHHHHHHHcC-CCcCCCCCcEEEECCCc
Confidence            7899999999999997 888999999887 5554

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.3e-43  Score=298.64  Aligned_cols=232  Identities=21%  Similarity=0.196  Sum_probs=197.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-------------ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-------------NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFA   67 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   67 (288)
                      |||||++|||+++|++|+++|++|++++|             +.+.+++..+++...  +.++.++.+|++|.+++++++
T Consensus        15 lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~   92 (277)
T 3tsc_A           15 FITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRDFDRLRKVV   92 (277)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHH
T ss_pred             EEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHH
Confidence            69999999999999999999999999998             677777777777655  567999999999999999999


Q ss_pred             HHHHhcCCCcceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc
Q 023054           68 QNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY  145 (288)
Q Consensus        68 ~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  145 (288)
                      +++.+.++++|+||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+++.    .|+||++||..+..+ 
T Consensus        93 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~----~g~iv~isS~~~~~~-  167 (277)
T 3tsc_A           93 DDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR----GGSIILISSAAGMKM-  167 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSC-
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC----CCEEEEEccHhhCCC-
Confidence            99999999999999999987553  36788999999999999999999999999987632    479999999998763 


Q ss_pred             cCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHH---------
Q 023054          146 KGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFL---------  216 (288)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~---------  216 (288)
                                    .++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++...........         
T Consensus       168 --------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  231 (277)
T 3tsc_A          168 --------------QPFMIHYTASKHAVTGLARAFAAELGKHS--IRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLS  231 (277)
T ss_dssp             --------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGT
T ss_pred             --------------CCCchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeCCCcCCcccchhhhhhhhcccccHHHH
Confidence                          66778999999999999999999999999  99999999999999876421100000         


Q ss_pred             ----HHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          217 ----KFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       217 ----~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                          ...+ .++.+|+|+|+.++||++ +.+.++||+.|. |+|..
T Consensus       232 ~~~~~~~p-~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          232 HVLTPFLP-DWVAEPEDIADTVCWLAS-DESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             TTTCCSSS-CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHhhhccC-CCCCCHHHHHHHHHHHhC-ccccCCcCCEEeeCCCcc
Confidence                0011 246799999999999997 889999999887 56543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=5.3e-43  Score=294.51  Aligned_cols=226  Identities=26%  Similarity=0.260  Sum_probs=196.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+++.++++.+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        12 lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A           12 IVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999999888877766     3578999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+       .|+||++||..+..+              
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~--------------  145 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE-------GGSIVFTSSVADEGG--------------  145 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCGGGSSB--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-------CCEEEEECChhhcCC--------------
Confidence            999998754  336788999999999999999999999998855       479999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----H----HHHHHHHHHhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----V----VMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~----~~~~~~~~~~~~~~~~~~~  230 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++.....    .    ........+..+..+|+|+
T Consensus       146 -~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  222 (255)
T 4eso_A          146 -HPGMSVYSASKAALVSFASVLAAELLPRG--IRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEV  222 (255)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHH
Confidence             66788999999999999999999999999  99999999999999875321    1    1112233466777899999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+.++||++ + ++++||+.|. |+|..
T Consensus       223 A~~v~~L~s-~-~~~itG~~i~vdGG~~  248 (255)
T 4eso_A          223 ARAVLFLAF-E-ATFTTGAKLAVDGGLG  248 (255)
T ss_dssp             HHHHHHHHH-T-CTTCCSCEEEESTTTT
T ss_pred             HHHHHHHcC-c-CcCccCCEEEECCCcc
Confidence            999999998 5 8999999887 55543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-42  Score=288.42  Aligned_cols=231  Identities=26%  Similarity=0.305  Sum_probs=203.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         9 lITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   86 (247)
T 3lyl_A            9 LVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAENLAIDIL   86 (247)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999999888888765  5679999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+              
T Consensus        87 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  147 (247)
T 3lyl_A           87 VNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-----WGRIISIGSVVGSAG--------------  147 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC--------------
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CeEEEEEcchhhccC--------------
Confidence            9999987542  3667889999999999999999999999998865     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||++++.|+++++.+++.+|  |+||+|+||++.|++.......  .......+..++.+|+|+|+.++|
T Consensus       148 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  224 (247)
T 3lyl_A          148 -NPGQTNYCAAKAGVIGFSKSLAYEVASRN--ITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAF  224 (247)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHH
Confidence             56778999999999999999999999999  9999999999999998765322  112223455667799999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |++ +...+++|+.|. ++|+
T Consensus       225 l~s-~~~~~~tG~~i~vdgG~  244 (247)
T 3lyl_A          225 LAS-EEAKYITGQTLHVNGGM  244 (247)
T ss_dssp             HHS-GGGTTCCSCEEEESTTS
T ss_pred             HhC-CCcCCccCCEEEECCCE
Confidence            997 788999999887 5554

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.1e-42  Score=297.43  Aligned_cols=231  Identities=15%  Similarity=0.145  Sum_probs=197.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQ   68 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   68 (288)
                      |||||++|||+++|+.|+++|++|++++|+            .+.+++..+++...  +.++.++.+|++|.++++++++
T Consensus        32 lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~  109 (299)
T 3t7c_A           32 FITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVRDFDAMQAAVD  109 (299)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHH
Confidence            699999999999999999999999999987            77788877777665  5689999999999999999999


Q ss_pred             HHHhcCCCcceEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc
Q 023054           69 NFIALNLPLNILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY  145 (288)
Q Consensus        69 ~~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  145 (288)
                      ++.+.++++|+||||||+...   ..+.+.++|++.+++|+.++++++++++|+|.+++.    .|+||++||..+..+ 
T Consensus       110 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~----~g~Iv~isS~~~~~~-  184 (299)
T 3t7c_A          110 DGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR----GGSIVFTSSIGGLRG-  184 (299)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS----CEEEEEECCGGGTSC-
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEECChhhccC-
Confidence            999999999999999998654   336788999999999999999999999999877532    589999999998763 


Q ss_pred             cCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH------------H
Q 023054          146 KGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV------------M  213 (288)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~------------~  213 (288)
                                    .++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.......            .
T Consensus       185 --------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  248 (299)
T 3t7c_A          185 --------------AENIGNYIASKHGLHGLMRTMALELGPRN--IRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVE  248 (299)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHH
T ss_pred             --------------CCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCCccCccccccchhhhhhhhhccchhh
Confidence                          66778999999999999999999999999  9999999999999997643111            0


Q ss_pred             H------HHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          214 R------FLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       214 ~------~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .      .....+ .++.+|+|+|+.++||++ +.+.++||+.|. |+|.
T Consensus       249 ~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~  296 (299)
T 3t7c_A          249 DFQVASRQMHVLP-IPYVEPADISNAILFLVS-DDARYITGVSLPVDGGA  296 (299)
T ss_dssp             HHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHhhhhcccC-cCCCCHHHHHHHHHHHhC-cccccCcCCEEeeCCCc
Confidence            0      001112 456799999999999997 889999999887 5554

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.3e-43  Score=296.95  Aligned_cols=228  Identities=24%  Similarity=0.267  Sum_probs=198.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        33 lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           33 IVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             EETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999888877776     4678999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .|+||++||..+..+              
T Consensus       108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~Iv~isS~~~~~~--------------  168 (277)
T 3gvc_A          108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-----GGAIVNLSSLAGQVA--------------  168 (277)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEcchhhccC--------------
Confidence            999998754  33678899999999999999999999999998865     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh------HHH---HHHHHHHhhhcCChHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA------VVM---RFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~------~~~---~~~~~~~~~~~~~~~~  229 (288)
                       .++...|++||+|++.|+++++.+++++|  |+||+|+||+++|++.....      ...   ......+..++.+|+|
T Consensus       169 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ped  245 (277)
T 3gvc_A          169 -VGGTGAYGMSKAGIIQLSRITAAELRSSG--IRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEE  245 (277)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHH
Confidence             66778999999999999999999999999  99999999999999754310      001   1111456677889999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+.++||++ +.+.++||+.|. |+|.
T Consensus       246 vA~~v~~L~s-~~a~~itG~~i~vdGG~  272 (277)
T 3gvc_A          246 MAGIVVFLLS-DDASMITGTTQIADGGT  272 (277)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHcC-CccCCccCcEEEECCcc
Confidence            9999999997 788999999887 5554

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.1e-42  Score=296.05  Aligned_cols=230  Identities=25%  Similarity=0.287  Sum_probs=197.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        31 lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           31 IVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999888877765     5678999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+              
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  166 (277)
T 4dqx_A          106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-----GGSIINTTSYTATSA--------------  166 (277)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEECchhhCcC--------------
Confidence            999998654  33677889999999999999999999999998765     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-----hHHH---HHHHHHHhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-----AVVM---RFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~  230 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++....     ....   .+....+..++.+|+|+
T Consensus       167 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv  243 (277)
T 4dqx_A          167 -IADRTAYVASKGAISSLTRAMAMDHAKEG--IRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEI  243 (277)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHH
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHH
Confidence             66778999999999999999999999999  9999999999999983221     0111   12223455667799999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCccCC
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      |+.++||++ +...++||+.|. |+|...
T Consensus       244 A~~v~~L~s-~~~~~itG~~i~vdGG~~~  271 (277)
T 4dqx_A          244 AEAMLFLAS-DRSRFATGSILTVDGGSSI  271 (277)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEESSSSSS
T ss_pred             HHHHHHHhC-CccCCCcCCEEEECCchhh
Confidence            999999997 788999999887 555443

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-42  Score=296.27  Aligned_cols=232  Identities=21%  Similarity=0.255  Sum_probs=197.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-------------ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-------------NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFA   67 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   67 (288)
                      |||||++|||+++|++|+++|++|++++|             +.+.++++.+++...  +.++.++.+|++|.+++++++
T Consensus        19 lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~   96 (280)
T 3pgx_A           19 FITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVRDDAALRELV   96 (280)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHH
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHH
Confidence            69999999999999999999999999998             678888888877665  567999999999999999999


Q ss_pred             HHHHhcCCCcceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc
Q 023054           68 QNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY  145 (288)
Q Consensus        68 ~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  145 (288)
                      +++.+.++++|+||||||+....  .+.+.++|++.+++|+.++++++++++|+|.+++.    .|+||++||..+..+ 
T Consensus        97 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~-  171 (280)
T 3pgx_A           97 ADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN----GGSIVVVSSSAGLKA-  171 (280)
T ss_dssp             HHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS----CEEEEEECCGGGTSC-
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC----CCEEEEEcchhhccC-
Confidence            99999999999999999987542  36788999999999999999999999999987531    589999999998763 


Q ss_pred             cCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHH--------
Q 023054          146 KGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK--------  217 (288)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~--------  217 (288)
                                    .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++.........+..        
T Consensus       172 --------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  235 (280)
T 3pgx_A          172 --------------TPGNGHYSASKHGLTALTNTLAIELGEYG--IRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSF  235 (280)
T ss_dssp             --------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGS
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccCcccchhhhhhhhhcCchhhhhh
Confidence                          66778999999999999999999999999  999999999999999764211111110        


Q ss_pred             ----HHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          218 ----FFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       218 ----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                          ..+ .++.+|+|+|+.++||++ +.+.++||+.|. |+|..
T Consensus       236 ~~~~~~~-~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          236 PPMPVQP-NGFMTADEVADVVAWLAG-DGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             CCBTTBC-SSCBCHHHHHHHHHHHHS-GGGTTCSSCEEEESTTGG
T ss_pred             hhcccCC-CCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence                001 135689999999999997 889999999887 55543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-42  Score=293.80  Aligned_cols=231  Identities=23%  Similarity=0.253  Sum_probs=196.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQ   68 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   68 (288)
                      |||||++|||+++|++|+++|++|++++|+            .+.+++..+.+...  +.++.++.+|++|.++++++++
T Consensus        14 lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   91 (281)
T 3s55_A           14 LITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKDRAALESFVA   91 (281)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHH
Confidence            699999999999999999999999999997            66677777666655  5679999999999999999999


Q ss_pred             HHHhcCCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccccccc
Q 023054           69 NFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYK  146 (288)
Q Consensus        69 ~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  146 (288)
                      ++.+.++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+  
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--  164 (281)
T 3s55_A           92 EAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-----YGRIVTVSSMLGHSA--  164 (281)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGGSC--
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEECChhhcCC--
Confidence            999999999999999998754  34678889999999999999999999999998865     689999999998763  


Q ss_pred             CCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH------------HHH
Q 023054          147 GGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV------------VMR  214 (288)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~------------~~~  214 (288)
                                   .++...|++||+|+++|+++++.|++++|  |+||+|+||++.|++......            ...
T Consensus       165 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  229 (281)
T 3s55_A          165 -------------NFAQASYVSSKWGVIGLTKCAAHDLVGYG--ITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKD  229 (281)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSTTTSSHHHHHC-------CCHHH
T ss_pred             -------------CCCCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccccchhhhccccccccccchhH
Confidence                         56778999999999999999999999999  999999999999999764210            000


Q ss_pred             HHHH---H--HhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          215 FLKF---F--SFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       215 ~~~~---~--~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ....   .  ...++.+|+|+|+.++||++ +.+.++||+.|. |+|.
T Consensus       230 ~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdgG~  276 (281)
T 3s55_A          230 VESVFASLHLQYAPFLKPEEVTRAVLFLVD-EASSHITGTVLPIDAGA  276 (281)
T ss_dssp             HHHHHHHHCSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhhhccCcCCCCHHHHHHHHHHHcC-CcccCCCCCEEEECCCc
Confidence            0110   0  11456689999999999997 788999999887 5554

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.2e-43  Score=296.98  Aligned_cols=228  Identities=25%  Similarity=0.266  Sum_probs=191.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|+++ .|+.+..+++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        31 lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  108 (267)
T 3u5t_A           31 IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAEEAFGGVDV  108 (267)
T ss_dssp             EEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999998 55677777777777665  567999999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+       .|+||++||..+..+             
T Consensus       109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~-------------  168 (267)
T 3u5t_A          109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV-------GGRIINMSTSQVGLL-------------  168 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCTHHHHC-------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCeEEEEeChhhccC-------------
Confidence            9999998754  236677889999999999999999999999954       479999999988763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                        .++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.....   ....+....+..++.+|+|+|+.+
T Consensus       169 --~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  244 (267)
T 3u5t_A          169 --HPSYGIYAAAKAGVEAMTHVLSKELRGRD--ITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAV  244 (267)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence              56778999999999999999999999999  99999999999999875421   122233334666778999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +||++ +.+.++||+.|. |+|
T Consensus       245 ~~L~s-~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          245 AFLAG-PDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHHHS-TTTTTCCSEEEEESSS
T ss_pred             HHHhC-ccccCccCCEEEeCCC
Confidence            99997 889999999887 454

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.2e-43  Score=301.83  Aligned_cols=250  Identities=16%  Similarity=0.124  Sum_probs=209.4

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|+.|+++|++|++++|+.+ .++..+++....+  ++.++.+|++|.++++++++++.+.++++|
T Consensus        10 lVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   86 (275)
T 2pd4_A           10 LIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKKDLGSLD   86 (275)
T ss_dssp             EEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHTSCEE
T ss_pred             EEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            699999  99999999999999999999999986 4445555555432  378899999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+...      ..+.+.++|++.+++|+.+++.++++++|.|.+       +|+||++||..+..+        
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~--------  151 (275)
T 2pd4_A           87 FIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-------GASVLTLSYLGSTKY--------  151 (275)
T ss_dssp             EEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB--------
T ss_pred             EEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEecchhcCC--------
Confidence            99999998642      236678899999999999999999999999853       479999999887653        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH----HHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM----RFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~  228 (288)
                             .++...|++||++++.|+++++.+++++|  |+||+|+||+++|++........    .+....+..++.+|+
T Consensus       152 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~  222 (275)
T 2pd4_A          152 -------MAHYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE  222 (275)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             -------CCCchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHH
Confidence                   56678899999999999999999999999  99999999999999876532111    122233555678999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCccC--CCCccccCHHHHHHHHHHHHH
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNEM--PPSALARDETLAKKLWDFSNK  278 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~  278 (288)
                      |+|+.++|+++ +...+++|++|. ++|..  ...+...+++.++++|+++++
T Consensus       223 dva~~~~~l~s-~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          223 EVGNAGMYLLS-SLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             HHHHHHHHHhC-ccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhcc
Confidence            99999999997 778999999886 66653  356777899999999999864

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-42  Score=295.23  Aligned_cols=235  Identities=22%  Similarity=0.250  Sum_probs=185.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++| +.+.+++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        33 lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  110 (280)
T 4da9_A           33 IVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAVVAEFGRIDC  110 (280)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred             EEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999995 777788888877665  567999999999999999999999999999999


Q ss_pred             EEEccccCC----CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           80 LINNAGIMF----CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        80 lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ||||||+..    +..+.+.++|++.+++|+.++++++++++|.|.+++.  ...|+||++||..+..+           
T Consensus       111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--~~~g~Iv~isS~~~~~~-----------  177 (280)
T 4da9_A          111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDA--RASRSIINITSVSAVMT-----------  177 (280)
T ss_dssp             EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCC--CCCEEEEEECCC----------------
T ss_pred             EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC--CCCCEEEEEcchhhccC-----------
Confidence            999999842    2336788999999999999999999999999987531  11479999999998763           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHH-HHHhhhcCChHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLK-FFSFFLWKNVPQGAA  232 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~-~~~~~~~~~~~~~a~  232 (288)
                          .++...|++||+|+++|+++++.++++.|  |+||+|+||+++|++......  ...... ..+..++.+|+|+|+
T Consensus       178 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  251 (280)
T 4da9_A          178 ----SPERLDYCMSKAGLAAFSQGLALRLAETG--IAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGN  251 (280)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC----------------------CCBCHHHHHH
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHH
Confidence                56778899999999999999999999999  999999999999999765421  111222 456777889999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCccC
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      .++||++ +.+.++||+.|. |+|+.
T Consensus       252 ~v~~L~s-~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          252 IVAGLAG-GQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             HHHHHHT-STTGGGTTCEEEESTTCC
T ss_pred             HHHHHhC-ccccCCCCCEEEECCCcc
Confidence            9999997 888999999887 55543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-42  Score=293.32  Aligned_cols=230  Identities=23%  Similarity=0.250  Sum_probs=198.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++++ .+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        35 lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (271)
T 3v2g_A           35 FVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRETVEALGGLDI  112 (271)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            699999999999999999999999999664 56677777777665  567999999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.+       .|+||++||..+...             
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-------~g~iv~isS~~~~~~-------------  172 (271)
T 3v2g_A          113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-------GGRIITIGSNLAELV-------------  172 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCGGGTCC-------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEeChhhccC-------------
Confidence            9999998754  336788899999999999999999999999964       579999999876542             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-HHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-VVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       +.++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++..... .........+..++.+|+|+|+.++|
T Consensus       173 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~f  249 (271)
T 3v2g_A          173 -PWPGISLYSASKAALAGLTKGLARDLGPRG--ITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAW  249 (271)
T ss_dssp             -CSTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence             246778999999999999999999999999  99999999999999976542 23334455677778899999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |++ +...++||+.|. |+|.
T Consensus       250 L~s-~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          250 LAG-PQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             HHS-GGGTTCCSCEEEESTTT
T ss_pred             HhC-cccCCccCCEEEeCcCc
Confidence            997 889999999887 5554

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.6e-42  Score=291.93  Aligned_cols=233  Identities=19%  Similarity=0.168  Sum_probs=195.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQ   68 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   68 (288)
                      |||||++|||+++|+.|+++|++|++++|+            .+.+++..+.+...  +.++.++.+|++|.++++++++
T Consensus        17 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~   94 (278)
T 3sx2_A           17 FITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRDRESLSAALQ   94 (278)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHH
Confidence            699999999999999999999999999987            77777777777665  5689999999999999999999


Q ss_pred             HHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCC
Q 023054           69 NFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGG  148 (288)
Q Consensus        69 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  148 (288)
                      ++.+.++++|+||||||+.....  +.++|++.+++|+.++++++++++|+|.+++.    .|+||++||..+..+..  
T Consensus        95 ~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~g~iv~isS~~~~~~~~--  166 (278)
T 3sx2_A           95 AGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT----GGSIVLISSSAGLAGVG--  166 (278)
T ss_dssp             HHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS----CEEEEEECCGGGTSCCC--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CcEEEEEccHHhcCCCc--
Confidence            99999999999999999875432  57889999999999999999999999987531    58999999999876310  


Q ss_pred             ccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHH----------
Q 023054          149 IRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF----------  218 (288)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~----------  218 (288)
                               ...++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++.............          
T Consensus       167 ---------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  235 (278)
T 3sx2_A          167 ---------SADPGSVGYVAAKHGVVGLMRVYANLLAGQM--IRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAM  235 (278)
T ss_dssp             ---------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTT
T ss_pred             ---------cCCCCchHhHHHHHHHHHHHHHHHHHHhccC--cEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhh
Confidence                     0125678899999999999999999999999  9999999999999998754211111111          


Q ss_pred             ---HHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          219 ---FSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       219 ---~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                         .+ .++.+|+|+|+.++||++ +...++||+.|. |+|+
T Consensus       236 ~~~~p-~~~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          236 GNAMP-VEVLAPEDVANAVAWLVS-DQARYITGVTLPVDAGF  275 (278)
T ss_dssp             SCSSS-CSSBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTT
T ss_pred             hhhcC-cCcCCHHHHHHHHHHHhC-cccccccCCEEeECCCc
Confidence               11 345689999999999997 788999999887 5554

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=2e-42  Score=293.47  Aligned_cols=229  Identities=21%  Similarity=0.218  Sum_probs=195.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|+++++ +.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        22 lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   99 (270)
T 3is3_A           22 LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI   99 (270)
T ss_dssp             EESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999876 566677777777665  567999999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+       .|+||++||..+...             
T Consensus       100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~-------------  159 (270)
T 3is3_A          100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-------GGRIVLTSSNTSKDF-------------  159 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCTTTTTC-------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCeEEEEeCchhccC-------------
Confidence            9999998754  236788999999999999999999999999965       479999999874321             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------------hHHHHHHHHHHhhh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------------AVVMRFLKFFSFFL  223 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------------~~~~~~~~~~~~~~  223 (288)
                       +.++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++....              ..........+..+
T Consensus       160 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  236 (270)
T 3is3_A          160 -SVPKHSLYSGSKGAVDSFVRIFSKDCGDKK--ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHR  236 (270)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCS
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCC
Confidence             356778999999999999999999999999  9999999999999986521              11122333456677


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      ..+|+|+|+.++||++ +.+.++||+.|. |+|
T Consensus       237 ~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG  268 (270)
T 3is3_A          237 NGWPQDVANVVGFLVS-KEGEWVNGKVLTLDGG  268 (270)
T ss_dssp             CBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHcC-CccCCccCcEEEeCCC
Confidence            8899999999999997 889999999887 554

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=2.3e-42  Score=295.37  Aligned_cols=248  Identities=17%  Similarity=0.137  Sum_probs=195.5

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|+.|+++|++|++++|+.+ .++..+++....+  ++.++.+|++|.++++++++++.+.++++|
T Consensus        25 lVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  101 (285)
T 2p91_A           25 LITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEENWGSLD  101 (285)
T ss_dssp             EECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHTSCCC
T ss_pred             EEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            699999  99999999999999999999999985 4445555554432  378899999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+...      ..+.+.++|++.+++|+.+++.++++++|.|.++      +++||++||..+..+        
T Consensus       102 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~--------  167 (285)
T 2p91_A          102 IIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR------NGAIVTLSYYGAEKV--------  167 (285)
T ss_dssp             EEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS------CCEEEEEECGGGTSB--------
T ss_pred             EEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCEEEEEccchhccC--------
Confidence            99999998642      2356778999999999999999999999998643      589999999887653        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH----HHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM----RFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~  228 (288)
                             .++...|++||++++.|+++++.+++++|  |+||+|+||++.|++........    .+....+..++.+|+
T Consensus       168 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  238 (285)
T 2p91_A          168 -------VPHYNVMGIAKAALESTVRYLAYDIAKHG--HRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIE  238 (285)
T ss_dssp             -------CTTTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             -------CCCccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHH
Confidence                   55667899999999999999999999999  99999999999999876432111    122233455677999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCccCCCCccccCHHHHHHHHHH
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNEMPPSALARDETLAKKLWDF  275 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~~~~~~~~~~~~~~~~~~  275 (288)
                      |+|+.++||++ +...+++|+.+. ++|.........+++.++++|+.
T Consensus       239 dva~~~~~l~s-~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~lw~~  285 (285)
T 2p91_A          239 DVGDTAVFLCS-DWARAITGEVVHVDNGYHIMGVFGREEEIKKEVYGD  285 (285)
T ss_dssp             HHHHHHHHHTS-GGGTTCCSCEEEESTTGGGBSCC-------------
T ss_pred             HHHHHHHHHcC-CcccCCCCCEEEECCCcccccccCChHHHHHHhcCC
Confidence            99999999997 778899999776 77777777888999999999974

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=4.6e-42  Score=291.49  Aligned_cols=229  Identities=21%  Similarity=0.256  Sum_probs=195.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+ +..++..+++...  +.++.++.+|++|.++++++.+.+. .++++|+|
T Consensus        35 lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~-~~g~iD~l  110 (273)
T 3uf0_A           35 VVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVAEELA-ATRRVDVL  110 (273)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHHHHHH-HHSCCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH-hcCCCcEE
Confidence            699999999999999999999999999976 4456666666554  5679999999999999999965554 45899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .|+||++||..+..+              
T Consensus       111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~IV~isS~~~~~~--------------  171 (273)
T 3uf0_A          111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-----SGRIVTIASMLSFQG--------------  171 (273)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEcchHhcCC--------------
Confidence            999998754  33678899999999999999999999999998875     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++....    .....+....+..++.+|+|+|+.+
T Consensus       172 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v  248 (273)
T 3uf0_A          172 -GRNVAAYAASKHAVVGLTRALASEWAGRG--VGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPA  248 (273)
T ss_dssp             -CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHH
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence             56778999999999999999999999999  9999999999999987543    1223344456677788999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +.+.++||+.|. |+|+
T Consensus       249 ~~L~s-~~a~~itG~~i~vdGG~  270 (273)
T 3uf0_A          249 VFLAS-DAASYVHGQVLAVDGGW  270 (273)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHhC-chhcCCcCCEEEECcCc
Confidence            99997 788999999887 5554

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=8.7e-42  Score=285.70  Aligned_cols=231  Identities=24%  Similarity=0.306  Sum_probs=198.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++++| +.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         8 lVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   85 (246)
T 2uvd_A            8 LVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDVFGQVDI   85 (246)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999 888888887777654  457899999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+             
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  147 (246)
T 2uvd_A           86 LVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-----HGRIVNIASVVGVTG-------------  147 (246)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC-------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECCHHhcCC-------------
Confidence            9999998654  23567789999999999999999999999998765     589999999988763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|++||++++.|+++++.++++.|  |+||+|+||+++|++.....  ....+....+..++.+|+|+|+.++
T Consensus       148 --~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~  223 (246)
T 2uvd_A          148 --NPGQANYVAAKAGVIGLTKTSAKELASRN--ITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVT  223 (246)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              56678999999999999999999999999  99999999999999876532  1222223345566789999999999


Q ss_pred             HHhcCCCccCCCceeec-cCcc
Q 023054          236 YVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ||++ +...+++|+.+. ++|.
T Consensus       224 ~l~s-~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          224 FFAS-DQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTS
T ss_pred             HHcC-chhcCCCCCEEEECcCc
Confidence            9997 788999999887 5543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-41  Score=288.56  Aligned_cols=231  Identities=24%  Similarity=0.302  Sum_probs=194.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-CCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-LPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.+ +++|+
T Consensus        25 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~  102 (273)
T 1ae1_A           25 LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNI  102 (273)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCE
T ss_pred             EEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcE
Confidence            69999999999999999999999999999999888888877654  4578999999999999999999999988 89999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.+++.++++++|+|.+++     .++||++||..+..+             
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~-------------  164 (273)
T 1ae1_A          103 LVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-----NGNVIFLSSIAGFSA-------------  164 (273)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----SEEEEEECCGGGTSC-------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcCHhhcCC-------------
Confidence            9999998643  33567789999999999999999999999998765     589999999988753             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--------HHHHHHHHHHhhhcCChHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--------VVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~  229 (288)
                        .++...|++||++++.|+++++.++++.|  |+||+|+||++.|++.....        ....+....+..++.+|+|
T Consensus       165 --~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  240 (273)
T 1ae1_A          165 --LPSVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQE  240 (273)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHH
T ss_pred             --CCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHH
Confidence              56678999999999999999999999999  99999999999999865421        1112223345556789999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+.++||++ +...++||+.|. ++|.
T Consensus       241 vA~~v~~l~s-~~~~~~tG~~i~vdGG~  267 (273)
T 1ae1_A          241 VSALIAFLCF-PAASYITGQIIWADGGF  267 (273)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhC-ccccCcCCCEEEECCCc
Confidence            9999999997 788999999887 5554

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=5.5e-42  Score=290.30  Aligned_cols=230  Identities=22%  Similarity=0.269  Sum_probs=196.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...+++..+.++.+|+++.++++++++    .++++|+|
T Consensus        14 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~g~id~l   89 (267)
T 3t4x_A           14 LVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----KYPKVDIL   89 (267)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----HCCCCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----hcCCCCEE
Confidence            69999999999999999999999999999999999999999888777789999999999999887765    46899999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.+++.++++++|.|.+++     .|+||++||..+..+              
T Consensus        90 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  150 (267)
T 3t4x_A           90 INNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-----EGRVIFIASEAAIMP--------------  150 (267)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----EEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CCEEEEEcchhhccC--------------
Confidence            9999987542  3677889999999999999999999999998865     589999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----------h---HHHHHHHHH----Hh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----------A---VVMRFLKFF----SF  221 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----------~---~~~~~~~~~----~~  221 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++....          .   ....+....    +.
T Consensus       151 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (267)
T 3t4x_A          151 -SQEMAHYSATKTMQLSLSRSLAELTTGTN--VTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSII  227 (267)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSS
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccc
Confidence             66778999999999999999999999999  9999999999999865421          0   011111111    23


Q ss_pred             hhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          222 FLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      .++.+|+|+|+.++||++ +.+.++||+.|. |+|+.
T Consensus       228 ~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~  263 (267)
T 3t4x_A          228 QRLIRPEEIAHLVTFLSS-PLSSAINGSALRIDGGLV  263 (267)
T ss_dssp             CSCBCTHHHHHHHHHHHS-GGGTTCCSCEEEESTTCS
T ss_pred             cCccCHHHHHHHHHHHcC-ccccCccCCeEEECCCcc
Confidence            567899999999999997 889999999887 55554

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-42  Score=291.88  Aligned_cols=233  Identities=21%  Similarity=0.253  Sum_probs=199.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++....++.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        17 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   96 (267)
T 1iy8_A           17 LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGF   96 (267)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999888888888766545679999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+             
T Consensus        97 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  158 (267)
T 1iy8_A           97 FNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-----SGMVVNTASVGGIRG-------------  158 (267)
T ss_dssp             EECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSB-------------
T ss_pred             EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEEcchhhccC-------------
Confidence            999998643   23567789999999999999999999999998765     589999999987753             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC------hHHH----HHHHHHHhhhcCCh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS------AVVM----RFLKFFSFFLWKNV  227 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~------~~~~----~~~~~~~~~~~~~~  227 (288)
                        .++...|++||++++.|+++++.++++.|  |+||+|+||++.|++....      ....    .+....+..++.+|
T Consensus       159 --~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  234 (267)
T 1iy8_A          159 --IGNQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEA  234 (267)
T ss_dssp             --CSSBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCH
Confidence              56778999999999999999999999999  9999999999999985431      0111    11122344567799


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+|+.++||++ +...+++|+.|. ++|+
T Consensus       235 ~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~  263 (267)
T 1iy8_A          235 PEIAAVVAFLLS-DDASYVNATVVPIDGGQ  263 (267)
T ss_dssp             HHHHHHHHHHTS-GGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHcC-ccccCCCCCEEEECCCc
Confidence            999999999997 778899999887 5554

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-42  Score=290.71  Aligned_cols=229  Identities=19%  Similarity=0.212  Sum_probs=197.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   88 (262)
T 1zem_A           11 LVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFL   88 (262)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999999888888877654  4578999999999999999999999999999999


Q ss_pred             EEccccC-CC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIM-FC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~-~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+. ..  ..+.+.++|++.+++|+.+++.++++++|.|.+++     .|+||++||..+..+             
T Consensus        89 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  150 (262)
T 1zem_A           89 FNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-----YGRIVNTASMAGVKG-------------  150 (262)
T ss_dssp             EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHSC-------------
T ss_pred             EECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcchhhccC-------------
Confidence            9999976 32  33667889999999999999999999999998765     589999999988763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----------------h--HHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----------------A--VVMRFLKFF  219 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----------------~--~~~~~~~~~  219 (288)
                        .++...|++||+++..|++.++.++++.|  |+||+|+||++.|++....                +  ....+....
T Consensus       151 --~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (262)
T 1zem_A          151 --PPNMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV  226 (262)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcC
Confidence              56678999999999999999999999999  9999999999999985431                0  111122224


Q ss_pred             HhhhcCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          220 SFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       220 ~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      |..++.+|+|+|+.++||++ +.+.++||+.|..+
T Consensus       227 p~~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vd  260 (262)
T 1zem_A          227 PMRRYGDINEIPGVVAFLLG-DDSSFMTGVNLPIA  260 (262)
T ss_dssp             TTSSCBCGGGSHHHHHHHHS-GGGTTCCSCEEEES
T ss_pred             CCCCCcCHHHHHHHHHHHcC-chhcCcCCcEEecC
Confidence            55667899999999999997 78899999988743

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-42  Score=296.99  Aligned_cols=236  Identities=25%  Similarity=0.296  Sum_probs=201.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKA---HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||++|||+++|++|+++|+   +|++++|+.+.++++.+++...+++.++.++.+|++|.++++++++++.+.++++
T Consensus        37 lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  116 (287)
T 3rku_A           37 LITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDI  116 (287)
T ss_dssp             EEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSC
T ss_pred             EEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            6999999999999999999998   9999999999999999999887767889999999999999999999999999999


Q ss_pred             ceEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           78 NILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        78 d~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      |+||||||+...   ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+          
T Consensus       117 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~IV~isS~~~~~~----------  181 (287)
T 3rku_A          117 DILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-----SGDIVNLGSIAGRDA----------  181 (287)
T ss_dssp             CEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSC----------
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEECChhhcCC----------
Confidence            999999998642   34677889999999999999999999999998865     689999999998763          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHHHHHHHHHhhhcCChHHHHH
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                           .++...|++||+|+++|+++++.|+++.|  |+||+|+||+++|++....  ................+|+|+|+
T Consensus       182 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~  254 (287)
T 3rku_A          182 -----YPTGSIYCASKFAVGAFTDSLRKELINTK--IRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVAD  254 (287)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHH
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHH
Confidence                 66778999999999999999999999999  9999999999999984311  01111222233333348999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCccCCC
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCNEMPP  259 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~~~~~  259 (288)
                      .++||++ +...+++|+.+. +++...+
T Consensus       255 ~v~~l~s-~~~~~i~g~~i~v~~g~~~p  281 (287)
T 3rku_A          255 LIVYATS-RKQNTVIADTLIFPTNQASP  281 (287)
T ss_dssp             HHHHHHT-SCTTEEEEEEEEEETTEEET
T ss_pred             HHHHHhC-CCCCeEecceEEeeCCCCCC
Confidence            9999997 788899998766 5555443

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=8e-42  Score=286.83  Aligned_cols=225  Identities=15%  Similarity=0.059  Sum_probs=182.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+. +++|+|
T Consensus        11 lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~l   87 (252)
T 3h7a_A           11 AVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADAH-APLEVT   87 (252)
T ss_dssp             EEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH-SCEEEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHhh-CCceEE
Confidence            69999999999999999999999999999999999999888776  568999999999999999999999998 999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.+++     .|+||++||..+..+              
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  148 (252)
T 3h7a_A           88 IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-----QGKIFFTGATASLRG--------------  148 (252)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEEEEGGGTCC--------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEECCHHHcCC--------------
Confidence            999998754  23678889999999999999999999999998875     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEE-EEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITA-NSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v-~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                       .++...|++||+|+++|+++++.+++++|  |+| |+|+||+++|++......  ........+.. +.+|+|+|+.++
T Consensus       149 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~pedvA~~~~  224 (252)
T 3h7a_A          149 -GSGFAAFASAKFGLRAVAQSMARELMPKN--IHVAHLIIDSGVDTAWVRERREQMFGKDALANPDL-LMPPAAVAGAYW  224 (252)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC----------------------------CCHHHHHHHHH
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCCccCChhhhccchhhhhhhhhcCCcc-CCCHHHHHHHHH
Confidence             66778999999999999999999999999  999 999999999999875421  11122233444 789999999999


Q ss_pred             HHhcCCCccCCCceeec
Q 023054          236 YVALHPNLKGVTGKYFL  252 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~  252 (288)
                      ||++ +.....+|+...
T Consensus       225 ~l~s-~~~~~~~~~i~~  240 (252)
T 3h7a_A          225 QLYQ-QPKSAWTFEMEI  240 (252)
T ss_dssp             HHHH-CCGGGBCSEEEE
T ss_pred             HHHh-CchhcceeeEEe
Confidence            9998 566666777654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=2.9e-43  Score=297.25  Aligned_cols=235  Identities=16%  Similarity=0.161  Sum_probs=189.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN---MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||++|||+++|++|+++|++|++++|+   .+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++
T Consensus        15 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   92 (262)
T 3ksu_A           15 VIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDFAEKEFGKV   92 (262)
T ss_dssp             EEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHHHHHHHCSE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            699999999999999999999999998764   55677777777665  5689999999999999999999999999999


Q ss_pred             ceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           78 NILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        78 d~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |+||||||+....  .+.+.++|++.+++|+.++++++++++|+|.+       .|+||++||..+..+           
T Consensus        93 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~-----------  154 (262)
T 3ksu_A           93 DIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-------NGHIITIATSLLAAY-----------  154 (262)
T ss_dssp             EEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-------EEEEEEECCCHHHHH-----------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-------CCEEEEEechhhccC-----------
Confidence            9999999987543  36778899999999999999999999999933       579999999988764           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                          .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++.....   .........+..++.+|+|+|+
T Consensus       155 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  228 (262)
T 3ksu_A          155 ----TGFYSTYAGNKAPVEHYTRAASKELMKQQ--ISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAP  228 (262)
T ss_dssp             ----HCCCCC-----CHHHHHHHHHHHHTTTTT--CEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHH
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHH
Confidence                45667899999999999999999999999  99999999999999865431   1222333456667789999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCccCCCCccc
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCNEMPPSALA  263 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~~~~~~~~~  263 (288)
                      .++||++ + ..++||+.|. |+|+....+..
T Consensus       229 ~v~~L~s-~-~~~itG~~i~vdGg~~~~~~~~  258 (262)
T 3ksu_A          229 IIKFLTT-D-GWWINGQTIFANGGYTTREGHH  258 (262)
T ss_dssp             HHHHHHT-T-TTTCCSCEEEESTTCCCC----
T ss_pred             HHHHHcC-C-CCCccCCEEEECCCccCCCccc
Confidence            9999997 6 8999999887 67766555443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=5.6e-42  Score=294.34  Aligned_cols=231  Identities=13%  Similarity=0.070  Sum_probs=196.5

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++  |||+++|+.|+++|++|++++|+.+..+...+.....   .++.++.||++|.++++++++++.+.++++|
T Consensus        34 lVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  110 (296)
T 3k31_A           34 VIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAESVDNMFKVLAEEWGSLD  110 (296)
T ss_dssp             EEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6999997  9999999999999999999999976555444443333   2468899999999999999999999999999


Q ss_pred             eEEEccccCC------CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMF------CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+..      +..+.+.++|++.+++|+.++++++++++|+|.+       .|+||++||..+..+        
T Consensus       111 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~IV~isS~~~~~~--------  175 (296)
T 3k31_A          111 FVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-------GGSILTLSYYGAEKV--------  175 (296)
T ss_dssp             EEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGGGTSC--------
T ss_pred             EEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCEEEEEEehhhccC--------
Confidence            9999999874      2346778899999999999999999999999865       479999999998763        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH----HHHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV----MRFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~  228 (288)
                             .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++.......    .......+..++.+|+
T Consensus       176 -------~~~~~~Y~asKaal~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  246 (296)
T 3k31_A          176 -------VPHYNVMGVCKAALEASVKYLAVDLGKQQ--IRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLD  246 (296)
T ss_dssp             -------CTTTTHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHH
T ss_pred             -------CCCchhhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHH
Confidence                   66778999999999999999999999999  9999999999999998766322    2233345667778999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCccCCC
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNEMPP  259 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~~  259 (288)
                      |+|+.++||++ +.+.++||+.|. |+|+...
T Consensus       247 dvA~~v~fL~s-~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          247 DVGGAALYLLS-DLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHcC-CccCCccCCEEEECCCcccc
Confidence            99999999997 788999999887 6665443

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=6.6e-42  Score=287.43  Aligned_cols=227  Identities=22%  Similarity=0.209  Sum_probs=194.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecC--CChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDL--SSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|+  +|.++++++++++.+.++++|
T Consensus        16 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id   94 (252)
T 3f1l_A           16 LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLD   94 (252)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCS
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHHHHHhCCCCC
Confidence            699999999999999999999999999999999998888887653 34688999999  999999999999999999999


Q ss_pred             eEEEccccCC---CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||+..   +..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+           
T Consensus        95 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~-----------  158 (252)
T 3f1l_A           95 GVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-----AGSLVFTSSSVGRQG-----------  158 (252)
T ss_dssp             EEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-----SCEEEEECCGGGTSC-----------
T ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-----CCEEEEECChhhccC-----------
Confidence            9999999853   234677889999999999999999999999998765     689999999998763           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                          .++...|++||+|+++|+++++.++++.   |+||+|+||+++|++....      ....+...+.+|+|+|+.++
T Consensus       159 ----~~~~~~Y~asK~a~~~l~~~la~e~~~~---irvn~v~PG~v~t~~~~~~------~~~~~~~~~~~p~dva~~~~  225 (252)
T 3f1l_A          159 ----RANWGAYAASKFATEGMMQVLADEYQQR---LRVNCINPGGTRTAMRASA------FPTEDPQKLKTPADIMPLYL  225 (252)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEECCSBSSHHHHHH------CTTCCGGGSBCTGGGHHHHH
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHhcCC---cEEEEEecCcccCchhhhh------CCccchhccCCHHHHHHHHH
Confidence                6677899999999999999999999864   9999999999999874321      00112234679999999999


Q ss_pred             HHhcCCCccCCCceeec-cCccCC
Q 023054          236 YVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      ||++ +.+.++||+.|. |+|..+
T Consensus       226 ~L~s-~~~~~itG~~i~vdgG~~~  248 (252)
T 3f1l_A          226 WLMG-DDSRRKTGMTFDAQPGRKP  248 (252)
T ss_dssp             HHHS-GGGTTCCSCEEESSCC---
T ss_pred             HHcC-ccccCCCCCEEEeCCCcCC
Confidence            9997 888999999887 555443

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=5.7e-42  Score=288.82  Aligned_cols=231  Identities=22%  Similarity=0.266  Sum_probs=196.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA--ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.  +++..+++...  +.++.++.+|++|.++++++++++.+.++++|
T Consensus         6 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   83 (258)
T 3a28_C            6 MVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEKLGGFD   83 (258)
T ss_dssp             EEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            699999999999999999999999999999887  77777777654  45789999999999999999999999999999


Q ss_pred             eEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCC-CeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIE-GRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     . ++||++||..+..+           
T Consensus        84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~-----------  147 (258)
T 3a28_C           84 VLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-----VKGKIINAASIAAIQG-----------  147 (258)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCCEEEEECCGGGTSC-----------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-----CCcEEEEECcchhccC-----------
Confidence            99999998654  23567889999999999999999999999998764     4 89999999987753           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------------hHHHHHHHHHHhh
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------------AVVMRFLKFFSFF  222 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~  222 (288)
                          .++...|++||++++.|+++++.+++++|  |+||+|+||+++|++....             .....+....+..
T Consensus       148 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  221 (258)
T 3a28_C          148 ----FPILSAYSTTKFAVRGLTQAAAQELAPKG--HTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALG  221 (258)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTS
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCC
Confidence                56778999999999999999999999999  9999999999999985431             0011111123445


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++.+|+|+|+.++||++ +.+.+++|+.|. ++|+
T Consensus       222 r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~  255 (258)
T 3a28_C          222 RPSVPEDVAGLVSFLAS-ENSNYVTGQVMLVDGGM  255 (258)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSS
T ss_pred             CccCHHHHHHHHHHHhC-cccCCCCCCEEEECCCE
Confidence            67799999999999997 778999999887 5543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=9.6e-42  Score=287.05  Aligned_cols=231  Identities=20%  Similarity=0.195  Sum_probs=200.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAA-RNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++ |+.+..++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        17 lITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   94 (256)
T 3ezl_A           17 YVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDV   94 (256)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999988 6666666666666654  467899999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.+++.+++.++|+|.+++     .++||++||..+..+             
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  156 (256)
T 3ezl_A           95 LVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-----WGRIINISSVNGQKG-------------  156 (256)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCCCGGGS-------------
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEcchhhccC-------------
Confidence            9999998754  23677889999999999999999999999998875     689999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|++||+|+++|+++++.+++.+|  |+||+|+||+++|++.....  ....+....+..++.+|+|+|+.++
T Consensus       157 --~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  232 (256)
T 3ezl_A          157 --QFGQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVA  232 (256)
T ss_dssp             --CSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred             --CCCCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              66778999999999999999999999999  99999999999999876542  2233444456667789999999999


Q ss_pred             HHhcCCCccCCCceeec-cCcc
Q 023054          236 YVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ||++ +...++||+.|. ++|.
T Consensus       233 ~l~s-~~~~~~tG~~i~vdgG~  253 (256)
T 3ezl_A          233 WLAS-EESGFSTGADFSLNGGL  253 (256)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTS
T ss_pred             HHhC-CcccCCcCcEEEECCCE
Confidence            9997 788999999887 5554

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.7e-42  Score=285.31  Aligned_cols=222  Identities=14%  Similarity=0.108  Sum_probs=189.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++.     .++.++.+|++|.++++++++++.+.++++|+|
T Consensus         7 lVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            7 IVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----NAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            699999999999999999999999999999999888877762     358999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.++      +++||++||..+..+              
T Consensus        82 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~~--------------  141 (235)
T 3l6e_A           82 LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER------GGVLANVLSSAAQVG--------------  141 (235)
T ss_dssp             EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT------CEEEEEECCEECCSS--------------
T ss_pred             EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHHhcCC--------------
Confidence            999998644  2367889999999999999999999999999775      369999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|++||+|+++|+++++.+++.+|  |+||+|+||+++|++......       .+..++.+|+|+|+.++|++
T Consensus       142 -~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~pedvA~~v~~l~  211 (235)
T 3l6e_A          142 -KANESLYCASKWGMRGFLESLRAELKDSP--LRLVNLYPSGIRSEFWDNTDH-------VDPSGFMTPEDAAAYMLDAL  211 (235)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEEEEECCCC------------------CBCHHHHHHHHHHHT
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHhhccC--CEEEEEeCCCccCcchhccCC-------CCCcCCCCHHHHHHHHHHHH
Confidence             66778999999999999999999999999  999999999999999765421       12336689999999999999


Q ss_pred             cCCCccCCCceeeccCccC
Q 023054          239 LHPNLKGVTGKYFLDCNEM  257 (288)
Q Consensus       239 ~~~~~~~~tG~~~~~~~~~  257 (288)
                      +++...+++|..+.+....
T Consensus       212 ~~~~~~~i~~i~~~~~~~~  230 (235)
T 3l6e_A          212 EARSSCHVTDLFIGRNEGH  230 (235)
T ss_dssp             CCCSSEEEEEEEEEECCC-
T ss_pred             hCCCCcceeeEEEecCCCC
Confidence            8788889999888765543

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2e-42  Score=291.73  Aligned_cols=233  Identities=23%  Similarity=0.199  Sum_probs=187.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|+++ .|+.+..++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        12 lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   89 (259)
T 3edm_A           12 VVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAADKFGEIHG   89 (259)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999999998 66777777777777665  467899999999999999999999999999999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ||||||....   ..+.+.++|++.+++|+.++++++++++|+|.+       .|+||++||..+...            
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~------------  150 (259)
T 3edm_A           90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK-------GGAIVTFSSQAGRDG------------  150 (259)
T ss_dssp             EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHC------------
T ss_pred             EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCEEEEEcCHHhccC------------
Confidence            9999997632   336778899999999999999999999999865       479999999988721            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                        +.++...|++||+|+++|+++++.|+++.   |+||+|+||+++|++.....   .........+..+..+|+|+|+.
T Consensus       151 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~---I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~  225 (259)
T 3edm_A          151 --GGPGALAYATSKGAVMTFTRGLAKEVGPK---IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGL  225 (259)
T ss_dssp             --CSTTCHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCBCC----------------------CCBCHHHHHHH
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHHHCCC---CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHH
Confidence              35677899999999999999999999874   99999999999999976542   12233445677788899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCccCCCC
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNEMPPS  260 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~~~~~  260 (288)
                      ++||++ +.+.++||+.|. |+|.....
T Consensus       226 v~~L~s-~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          226 VAFLAS-DDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESBCSSBC-
T ss_pred             HHHHcC-ccccCccCCEEEECCCcCCCC
Confidence            999997 788999999888 55554443

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=6.9e-42  Score=291.72  Aligned_cols=228  Identities=19%  Similarity=0.173  Sum_probs=192.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++..++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         9 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            9 LITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999998887766543     4679999999999999999999999999999999


Q ss_pred             EEccccCCCC---C----CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           81 INNAGIMFCP---Y----QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        81 v~~ag~~~~~---~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      |||||+....   .    +.+.++|++.+++|+.+++.++++++|+|.++      +|+||++||..+..+         
T Consensus        84 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~---------  148 (281)
T 3zv4_A           84 IPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS------RGSVVFTISNAGFYP---------  148 (281)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTSS---------
T ss_pred             EECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc------CCeEEEEecchhccC---------
Confidence            9999986431   1    22235689999999999999999999999875      489999999998763         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC------------hHHHHHHHHHHh
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS------------AVVMRFLKFFSF  221 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~------------~~~~~~~~~~~~  221 (288)
                            .++...|++||+|+++|+++++.++++.   |+||+|+||+++|+|....            +....+....+.
T Consensus       149 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~---Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  219 (281)
T 3zv4_A          149 ------NGGGPLYTATKHAVVGLVRQMAFELAPH---VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI  219 (281)
T ss_dssp             ------SSSCHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHhcCC---CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC
Confidence                  5677889999999999999999999874   9999999999999986532            122334445577


Q ss_pred             hhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          222 FLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      .++.+|+|+|+.++||++++.+.++||+.|. |+|+.
T Consensus       220 ~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          220 GRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             SSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             CCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence            7888999999999999976788999999887 66654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.3e-41  Score=287.90  Aligned_cols=233  Identities=19%  Similarity=0.210  Sum_probs=195.2

Q ss_pred             CcccCC-ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGA-SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas-~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+ +|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        26 lITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  104 (266)
T 3o38_A           26 LVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEKAGRLDV  104 (266)
T ss_dssp             EESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcE
Confidence            699998 599999999999999999999999999999888886653 467999999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+....  .+.+.++|++.+++|+.+++.+++.++|+|.+++.    .++||++||..+..+             
T Consensus       105 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~~~iv~~sS~~~~~~-------------  167 (266)
T 3o38_A          105 LVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH----GGVIVNNASVLGWRA-------------  167 (266)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC----CEEEEEECCGGGTCC-------------
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CeEEEEeCCHHHcCC-------------
Confidence            99999986542  36788899999999999999999999999987521    689999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---HHHHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---VMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                        .++...|++||+|++.|+++++.+++.+|  |+||+|+||+++|++......   ...+....+..++.+|+|+|+.+
T Consensus       168 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i  243 (266)
T 3o38_A          168 --QHSQSHYAAAKAGVMALTRCSAIEAVEFG--VRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATI  243 (266)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence              66778999999999999999999999999  999999999999999765421   11222234556677999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +...++||++|. ++|+
T Consensus       244 ~~l~s-~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          244 AFLAS-DYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHS-GGGTTCCSCEEEESSCC
T ss_pred             HHHcC-ccccCccCCEEEEcCCc
Confidence            99997 788999999887 4543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-41  Score=284.59  Aligned_cols=224  Identities=22%  Similarity=0.230  Sum_probs=191.1

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||+++|++|+++|  +.|++++|+.+.++++.+++     +.++.++.+|++|.++++++++++.+.++++|
T Consensus         6 lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   80 (254)
T 3kzv_A            6 LVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGHGKID   80 (254)
T ss_dssp             EECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence            699999999999999999985  78999999999888877765     45799999999999999999999999999999


Q ss_pred             eEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||+...   ..+.+.++|++.+++|+.++++++++++|+|.++      +|+||++||..+..+           
T Consensus        81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~------~g~iv~isS~~~~~~-----------  143 (254)
T 3kzv_A           81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT------NGNVVFVSSDACNMY-----------  143 (254)
T ss_dssp             EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCSCCCCS-----------
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCeEEEEcCchhccC-----------
Confidence            99999998543   3467888999999999999999999999999875      489999999988763           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-----------hHHHHHHHHHHhhhc
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-----------AVVMRFLKFFSFFLW  224 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-----------~~~~~~~~~~~~~~~  224 (288)
                          .++...|++||+++++|+++++.++  .+  |+||+|+||+++|++....           .....+....+..++
T Consensus       144 ----~~~~~~Y~asK~a~~~~~~~la~e~--~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  215 (254)
T 3kzv_A          144 ----FSSWGAYGSSKAALNHFAMTLANEE--RQ--VKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQL  215 (254)
T ss_dssp             ----SCCSHHHHHHHHHHHHHHHHHHHHC--TT--SEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC--
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHhhc--cC--cEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCc
Confidence                6677899999999999999999998  56  9999999999999997643           122334455677778


Q ss_pred             CChHHHHHHHHHHhcCCC-ccCCCceeeccCc
Q 023054          225 KNVPQGAATTCYVALHPN-LKGVTGKYFLDCN  255 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~-~~~~tG~~~~~~~  255 (288)
                      .+|+|+|+.++||++ +. +.++||++|..++
T Consensus       216 ~~p~dva~~v~~L~s-~~~~~~itG~~i~vdg  246 (254)
T 3kzv_A          216 LDSSVPATVYAKLAL-HGIPDGVNGQYLSYND  246 (254)
T ss_dssp             --CHHHHHHHHHHHH-HCCCGGGTTCEEETTC
T ss_pred             CCcccHHHHHHHHHh-hcccCCCCccEEEecC
Confidence            899999999999998 66 5999999988444

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.1e-42  Score=290.05  Aligned_cols=227  Identities=20%  Similarity=0.240  Sum_probs=192.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCC-CceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDT-ARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++....++ .++.++.+|++|.++++++++++.+.++++|+
T Consensus        11 lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   90 (250)
T 3nyw_A           11 IITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDI   90 (250)
T ss_dssp             EEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            69999999999999999999999999999999999999988776544 67899999999999999999999999999999


Q ss_pred             EEEccccCCCC-CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           80 LINNAGIMFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        80 lv~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ||||||+.... .+.+.++|++.+++|+.+++.++++++|+|.+++     .|+||++||..+..+              
T Consensus        91 lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  151 (250)
T 3nyw_A           91 LVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-----NGYIFNVASRAAKYG--------------  151 (250)
T ss_dssp             EEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECC--------------------
T ss_pred             EEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CeEEEEEccHHhcCC--------------
Confidence            99999986542 2556788999999999999999999999998865     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++.....      ...+..++.+|+|+|+.++||+
T Consensus       152 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~p~dva~~v~~l~  222 (250)
T 3nyw_A          152 -FADGGIYGSTKFALLGLAESLYRELAPLG--IRVTTLCPGWVNTDMAKKAG------TPFKDEEMIQPDDLLNTIRCLL  222 (250)
T ss_dssp             --CCTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHHTT------CCSCGGGSBCHHHHHHHHHHHH
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCchhhhcC------CCcccccCCCHHHHHHHHHHHH
Confidence             34568899999999999999999999999  99999999999998754321      1134456789999999999999


Q ss_pred             cCCCccCCCceeeccCc
Q 023054          239 LHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       239 ~~~~~~~~tG~~~~~~~  255 (288)
                      +.+....+++..|..++
T Consensus       223 s~~~~~~~~~~~i~vd~  239 (250)
T 3nyw_A          223 NLSENVCIKDIVFEMKK  239 (250)
T ss_dssp             TSCTTEECCEEEEEEHH
T ss_pred             cCCCceEeeEEEEEeec
Confidence            86667777887776433

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.3e-41  Score=286.85  Aligned_cols=232  Identities=24%  Similarity=0.262  Sum_probs=192.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++++.|+++|++|++++|+.+. ++++.+++.... +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         8 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   86 (260)
T 1x1t_A            8 VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDI   86 (260)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999999887 777777775532 346889999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.+++.++++++|+|.+++     .++||++||..+..+             
T Consensus        87 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  148 (260)
T 1x1t_A           87 LVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-----FGRIINIASAHGLVA-------------  148 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCEEEEECcHHhCcC-------------
Confidence            9999998653  23567789999999999999999999999998765     589999999988753             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-------------HHHH-HHHHHhhh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-------------VMRF-LKFFSFFL  223 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-------------~~~~-~~~~~~~~  223 (288)
                        .++...|++||++++.|+++++.+++++|  |+||+|+||+++|++......             ...+ ....+..+
T Consensus       149 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  224 (260)
T 1x1t_A          149 --SANKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ  224 (260)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------------------------CHHHHCTTCC
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhccCC--EEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCC
Confidence              56678999999999999999999999999  999999999999998654310             0111 22234556


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.+|+|+|+.++||++ +...+++|+.+. ++|+
T Consensus       225 ~~~p~dva~~~~~l~s-~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          225 FVTPEQLGGTAVFLAS-DAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHhC-hhhcCCCCCEEEECCCc
Confidence            7899999999999997 778899999887 5553

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2e-41  Score=285.90  Aligned_cols=233  Identities=20%  Similarity=0.212  Sum_probs=189.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        13 lITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A           13 LITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999988877766     4679999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.+++.+++.++|+|.+++. +...++||++||..+..+             
T Consensus        88 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~-------------  153 (261)
T 3n74_A           88 VNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGA-KGQECVILNVASTGAGRP-------------  153 (261)
T ss_dssp             EECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCTTTTSC-------------
T ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CCCCeEEEEeCchhhcCC-------------
Confidence            999998652   235677899999999999999999999999987642 122578999999987753             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh------HHHHHHHHHHhhhcCChHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA------VVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~a  231 (288)
                        .+....|++||+|++.|+++++.++++++  |+||+|+||+++|++.....      ....+....+..++.+|+|+|
T Consensus       154 --~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  229 (261)
T 3n74_A          154 --RPNLAWYNATKGWVVSVTKALAIELAPAK--IRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLA  229 (261)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-------------------------CTTSSCCCHHHHH
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHH
Confidence              56778899999999999999999999999  99999999999999876431      112233344566778999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCccC
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +.++||++ +...++||+.|. ++|..
T Consensus       230 ~~~~~l~s-~~~~~itG~~i~vdgG~~  255 (261)
T 3n74_A          230 EAAAFLCS-PQASMITGVALDVDGGRS  255 (261)
T ss_dssp             HHHHHHTS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHcC-CcccCcCCcEEEecCCcc
Confidence            99999997 888999999887 55544

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-41  Score=287.16  Aligned_cols=232  Identities=21%  Similarity=0.274  Sum_probs=196.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        25 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l  103 (267)
T 1vl8_A           25 LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTV  103 (267)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999998888877773322 4578899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc-ccccccCCccccCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA-HQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~-~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .++||++||.. +..+             
T Consensus       104 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~~-------------  165 (267)
T 1vl8_A          104 VNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-----NPSIINIGSLTVEEVT-------------  165 (267)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-----SCEEEEECCGGGTCCC-------------
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEECCcchhccC-------------
Confidence            999998653  23567788999999999999999999999997754     58999999988 6542             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                        .++...|++||++++.|+++++.++++.|  |+||+|+||+++|++.....    ....+....+..++.+|+|+|+.
T Consensus       166 --~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~  241 (267)
T 1vl8_A          166 --MPNISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGV  241 (267)
T ss_dssp             --SSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred             --CCCChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHH
Confidence              45678999999999999999999999999  99999999999999865321    11112222345567899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++||++ +...+++|+.|. ++|+
T Consensus       242 v~~l~s-~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          242 AVFLAS-EEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHcC-ccccCCcCCeEEECCCC
Confidence            999997 778999999887 5553

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.6e-42  Score=293.36  Aligned_cols=227  Identities=19%  Similarity=0.240  Sum_probs=189.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-------HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-------ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.       +++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus        10 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   87 (274)
T 3e03_A           10 FITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRAAVAATVDT   87 (274)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            699999999999999999999999999998753       55566666555  568999999999999999999999999


Q ss_pred             CCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           74 NLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      ++++|+||||||+...  ..+.+.++|++++++|+.+++.++++++|+|.+++     .|+||++||..+..+.      
T Consensus        88 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~~------  156 (274)
T 3e03_A           88 FGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-----NPHILTLAPPPSLNPA------  156 (274)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-----SCEEEECCCCCCCCHH------
T ss_pred             cCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-----CceEEEECChHhcCCC------
Confidence            9999999999998754  23677889999999999999999999999998765     6899999998876420      


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCC-cccCCCCCCChHHHHHHHHHHhhhcCChHHH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPG-LIMTNLFKHSAVVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
                             ..++...|++||+|+++|+++++.+++++|  |+||+|+|| +++|++.....       ..+.....+|+|+
T Consensus       157 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~~v~T~~~~~~~-------~~~~~~~~~pedv  220 (274)
T 3e03_A          157 -------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQG--VAINALWPRTVIATDAINMLP-------GVDAAACRRPEIM  220 (274)
T ss_dssp             -------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECSBCBCC--------------CCCGGGSBCTHHH
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--EEEEEEECCcccccchhhhcc-------cccccccCCHHHH
Confidence                   024567899999999999999999999999  999999999 68999874321       1123346799999


Q ss_pred             HHHHHHHhcCCCccCCCceeeccCccC
Q 023054          231 AATTCYVALHPNLKGVTGKYFLDCNEM  257 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~~~~~~  257 (288)
                      |+.++||++ +...++||++|.+++..
T Consensus       221 A~~v~~l~s-~~~~~itG~~i~~~g~~  246 (274)
T 3e03_A          221 ADAAHAVLT-REAAGFHGQFLIDDEVL  246 (274)
T ss_dssp             HHHHHHHHT-SCCTTCCSCEEEHHHHH
T ss_pred             HHHHHHHhC-ccccccCCeEEEcCcch
Confidence            999999997 88999999999877653

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-41  Score=284.01  Aligned_cols=232  Identities=22%  Similarity=0.252  Sum_probs=196.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         6 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   83 (256)
T 1geg_A            6 LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   83 (256)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999999888888877654  4578999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.+++.    .++||++||..+..+              
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~--------------  145 (256)
T 1geg_A           84 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH----GGKIINACSQAGHVG--------------  145 (256)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CCEEEEECchhhcCC--------------
Confidence            999998643  235677899999999999999999999999987531    379999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------------HHHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------------VVMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~~~~  225 (288)
                       .++...|++||++++.|+++++.++++.|  |+||+|+||++.|++.....             ....+....+..++.
T Consensus       146 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  222 (256)
T 1geg_A          146 -NPELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLS  222 (256)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCB
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCc
Confidence             56678999999999999999999999999  99999999999999854320             001111123445677


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+|+|+.++||++ +...+++|+.+. ++|.
T Consensus       223 ~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          223 EPEDVAACVSYLAS-PDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESSSS
T ss_pred             CHHHHHHHHHHHhC-ccccCCCCCEEEeCCCc
Confidence            99999999999997 778899999887 5553

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-42  Score=289.90  Aligned_cols=231  Identities=22%  Similarity=0.171  Sum_probs=181.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A           11 IVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998887776665     4568999999999999999999999999999999


Q ss_pred             EEccccCCCCC------CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC-CCCCeEEEEcCccccccccCCccccC
Q 023054           81 INNAGIMFCPY------QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET-GIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        81 v~~ag~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      |||||+.....      +.+.++|++.+++|+.++++++++++|+|.++.... ...|+||++||..+..+         
T Consensus        86 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~---------  156 (257)
T 3tpc_A           86 VNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG---------  156 (257)
T ss_dssp             EECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC---------
T ss_pred             EECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC---------
Confidence            99999875421      456788999999999999999999999998742111 12689999999998873         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HHHHHHHHh-hhcCChHHH
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MRFLKFFSF-FLWKNVPQG  230 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~-~~~~~~~~~  230 (288)
                            .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++.......  ..+....+. .++.+|+|+
T Consensus       157 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dv  228 (257)
T 3tpc_A          157 ------QIGQAAYAASKGGVAALTLPAARELARFG--IRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEY  228 (257)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSCC--------------CCSSSSCSCBCHHHH
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHH
Confidence                  66778999999999999999999999999  9999999999999997654211  111122333 567899999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+.++||++ +  .++||+.|. |+|.
T Consensus       229 a~~v~~l~s-~--~~itG~~i~vdGG~  252 (257)
T 3tpc_A          229 AALVKHICE-N--TMLNGEVIRLDGAL  252 (257)
T ss_dssp             HHHHHHHHH-C--TTCCSCEEEESTTC
T ss_pred             HHHHHHHcc-c--CCcCCcEEEECCCc
Confidence            999999996 3  799999887 5554

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.1e-41  Score=295.19  Aligned_cols=231  Identities=19%  Similarity=0.243  Sum_probs=195.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQ   68 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   68 (288)
                      |||||++|||+++|+.|+++|++|++++|+            .+.+++..+++...  +.++.++.+|++|.++++++++
T Consensus        50 lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~  127 (317)
T 3oec_A           50 FITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRDLASLQAVVD  127 (317)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHH
Confidence            699999999999999999999999999886            67777777777655  5679999999999999999999


Q ss_pred             HHHhcCCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccccccc
Q 023054           69 NFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYK  146 (288)
Q Consensus        69 ~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~  146 (288)
                      ++.+.++++|+||||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++.    .|+||++||..+..+  
T Consensus       128 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~----~g~Iv~isS~~~~~~--  201 (317)
T 3oec_A          128 EALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ----GGSVIFVSSTVGLRG--  201 (317)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS----CEEEEEECCGGGSSC--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC----CCEEEEECcHHhcCC--
Confidence            999999999999999998754  346778899999999999999999999999987531    589999999998763  


Q ss_pred             CCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH------------H
Q 023054          147 GGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM------------R  214 (288)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~------------~  214 (288)
                                   .++...|++||+|+++|+++++.++++.|  |+||+|+||+++|++........            .
T Consensus       202 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (317)
T 3oec_A          202 -------------APGQSHYAASKHGVQGLMLSLANEVGRHN--IRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRED  266 (317)
T ss_dssp             -------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHH
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCccccchhhhhhhhhhccccchhH
Confidence                         66778999999999999999999999999  99999999999999754321100            0


Q ss_pred             HHHH------HHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          215 FLKF------FSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       215 ~~~~------~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ....      .+ .++.+|+|+|+.++||++ +.+.++||+.|. |+|.
T Consensus       267 ~~~~~~~~~~~p-~~~~~pedvA~av~fL~s-~~a~~itG~~i~vdGG~  313 (317)
T 3oec_A          267 AAELFSQLTLLP-IPWVEPEDVSNAVAWLAS-DEARYIHGAAIPVDGGQ  313 (317)
T ss_dssp             HHHHHTTTCSSS-SSSBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHhhhccCC-CCCCCHHHHHHHHHHHcC-CcccCCCCCEEEECcch
Confidence            1111      11 345689999999999997 889999999887 5554

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.8e-41  Score=287.77  Aligned_cols=231  Identities=21%  Similarity=0.258  Sum_probs=193.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++| +.+..+...+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        33 lITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (271)
T 4iin_A           33 LITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY  110 (271)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            69999999999999999999999999999 555556666666554  567999999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+....  .+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+             
T Consensus       111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  172 (271)
T 4iin_A          111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-----FGSVVNVASIIGERG-------------  172 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC-------------
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-----CCEEEEEechhhcCC-------------
Confidence            99999987653  3567789999999999999999999999998875     689999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|++||++++.|+++++.+++..+  |+||+|+||++.|++......  ........+..++.+|+|+|+.++
T Consensus       173 --~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~  248 (271)
T 4iin_A          173 --NMGQTNYSASKGGMIAMSKSFAYEGALRN--IRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVA  248 (271)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHH
T ss_pred             --CCCchHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHH
Confidence              66778999999999999999999999998  999999999999999765421  111222345566779999999999


Q ss_pred             HHhcCCCccCCCceeec-cCcc
Q 023054          236 YVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ||++ +...++||+.|. ++|+
T Consensus       249 ~l~s-~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          249 FLLS-DHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTS
T ss_pred             HHhC-CCcCCCcCCEEEeCCCe
Confidence            9997 788999999887 5554

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.3e-41  Score=284.21  Aligned_cols=228  Identities=24%  Similarity=0.260  Sum_probs=171.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        13 lITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   90 (253)
T 3qiv_A           13 IVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYL   90 (253)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999999988888765  5679999999999999999999999999999999


Q ss_pred             EEccccCCC-----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           81 INNAGIMFC-----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        81 v~~ag~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |||||+...     ..+.+.++|++.+++|+.+++++++.++|.|.+++     .++||++||..+.             
T Consensus        91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~-------------  152 (253)
T 3qiv_A           91 VNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-----GGAIVNQSSTAAW-------------  152 (253)
T ss_dssp             EECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CEEEEEECC-----------------
T ss_pred             EECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CCEEEEECCcccc-------------
Confidence            999998432     23567789999999999999999999999998875     6899999998854             


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                           .+...|++||++++.|+++++.+++.++  |+||+|+||++.|++.....   ......+..+..++.+|+|+|+
T Consensus       153 -----~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  225 (253)
T 3qiv_A          153 -----LYSNYYGLAKVGINGLTQQLSRELGGRN--IRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVG  225 (253)
T ss_dssp             ------------CCHHHHHHHHHHHHHHTTTTT--EEEEEEEC-------------------------------CCHHHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHH
Confidence                 3556799999999999999999999998  99999999999999876542   2223444556677789999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCcc
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .++|+++ +...+++|+.|. ++|.
T Consensus       226 ~~~~l~s-~~~~~~tG~~~~vdgG~  249 (253)
T 3qiv_A          226 MCLFLLS-DEASWITGQIFNVDGGQ  249 (253)
T ss_dssp             HHHHHHS-GGGTTCCSCEEEC----
T ss_pred             HHHHHcC-ccccCCCCCEEEECCCe
Confidence            9999997 788999999887 4443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=4.3e-41  Score=288.36  Aligned_cols=230  Identities=15%  Similarity=0.069  Sum_probs=190.9

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|+.|+++|++|++++|+++..+. .+++....  .++.++.+|++|.++++++++++.+.++++|
T Consensus        35 lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  111 (293)
T 3grk_A           35 LILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR-VEPLAEEL--GAFVAGHCDVADAASIDAVFETLEKKWGKLD  111 (293)
T ss_dssp             EEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH-HHHHHHHH--TCEEEEECCTTCHHHHHHHHHHHHHHTSCCS
T ss_pred             EEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhc--CCceEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            699999  559999999999999999999999654443 33343332  3588999999999999999999999999999


Q ss_pred             eEEEccccCC------CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMF------CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+..      +..+.+.++|++.+++|+.++++++++++|+|.+       .|+||++||..+..+        
T Consensus       112 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~~--------  176 (293)
T 3grk_A          112 FLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-------GGSILTLTYYGAEKV--------  176 (293)
T ss_dssp             EEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-------CEEEEEEECGGGTSB--------
T ss_pred             EEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CCEEEEEeehhhccC--------
Confidence            9999999874      2346778899999999999999999999999965       589999999998763        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~  228 (288)
                             .+....|++||+|+++|+++++.+++++|  |+||+|+||+++|++.....    .........+..++.+|+
T Consensus       177 -------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  247 (293)
T 3grk_A          177 -------MPNYNVMGVAKAALEASVKYLAVDLGPQN--IRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTID  247 (293)
T ss_dssp             -------CTTTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHH
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHHHhHhC--CEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHH
Confidence                   66778999999999999999999999999  99999999999999876542    122333445667788999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCccCC
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      |+|+.++||++ +.+.++||+.|. |+|+..
T Consensus       248 dvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          248 EVGDVGLYFLS-DLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHcC-ccccCCcceEEEECCCccc
Confidence            99999999997 788999999887 666543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.7e-41  Score=285.16  Aligned_cols=229  Identities=21%  Similarity=0.196  Sum_probs=185.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         8 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   85 (264)
T 3tfo_A            8 LITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVL   85 (264)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999999998888766  5678999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++++++|+.++++++++++|.|.+++     .|+||++||..+..+              
T Consensus        86 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~IV~isS~~~~~~--------------  146 (264)
T 3tfo_A           86 VNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-----SGQIINIGSIGALSV--------------  146 (264)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTCC--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CeEEEEEcCHHHccc--------------
Confidence            999998754  23678899999999999999999999999998865     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHH-HHHHhhhcCChHHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFL-KFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l  237 (288)
                       .++...|++||+|+.+|+++++.++ + |  |+||+|+||+++|++........... .........+|+|+|+.++||
T Consensus       147 -~~~~~~Y~asKaal~~l~~~la~e~-~-g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l  221 (264)
T 3tfo_A          147 -VPTAAVYCATKFAVRAISDGLRQES-T-N--IRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQV  221 (264)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHC-S-S--EEEEEEEECCC-----------------------CCCHHHHHHHHHHH
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHhC-C-C--CEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHH
Confidence             6677899999999999999999998 4 7  99999999999999976542111110 011122246899999999999


Q ss_pred             hcCCCccCCCceeec-cCcc
Q 023054          238 ALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++ +...+.+|+.+. +.++
T Consensus       222 ~s-~~~~~~~~~i~i~p~~~  240 (264)
T 3tfo_A          222 IE-APQSVDTTEITIRPTAS  240 (264)
T ss_dssp             HH-SCTTEEEEEEEEEECC-
T ss_pred             hc-CCccCccceEEEecCcc
Confidence            98 677778887655 4443

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4.7e-42  Score=293.62  Aligned_cols=239  Identities=20%  Similarity=0.220  Sum_probs=195.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQ   68 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   68 (288)
                      |||||++|||+++|++|+++|++|++++|+            .+.+++...++...  +.++.++.+|++|.++++++++
T Consensus        14 lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~   91 (287)
T 3pxx_A           14 LVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDRAAVSRELA   91 (287)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHH
T ss_pred             EEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHH
Confidence            699999999999999999999999999998            77777777777655  5689999999999999999999


Q ss_pred             HHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCC
Q 023054           69 NFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGG  148 (288)
Q Consensus        69 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  148 (288)
                      ++.+.++++|+||||||+.......+.++|++.+++|+.++++++++++|+|.+       .++||++||..+..+....
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  164 (287)
T 3pxx_A           92 NAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTS-------GASIITTGSVAGLIAAAQP  164 (287)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCHHHHHHHHCC
T ss_pred             HHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc-------CcEEEEeccchhccccccc
Confidence            999999999999999998765445778899999999999999999999999833       5899999999887642111


Q ss_pred             ccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHH------------H
Q 023054          149 IRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF------------L  216 (288)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~------------~  216 (288)
                          +.......++...|++||+++++|+++++.+++++|  |+||+|+||+++|++.........+            .
T Consensus       165 ----~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T 3pxx_A          165 ----PGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQS--IRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADAL  238 (287)
T ss_dssp             ----C-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred             ----ccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCccccccccccchhhhhccccccchhHHHH
Confidence                011111225667899999999999999999999999  9999999999999998653211111            0


Q ss_pred             H------HHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          217 K------FFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       217 ~------~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .      ..+ .++.+|+|+|+.++||++ +.+.++||+.|. |+|.
T Consensus       239 ~~~~~~~~~~-~~~~~p~dva~~v~fL~s-~~a~~itG~~i~vdGG~  283 (287)
T 3pxx_A          239 LAFPAMQAMP-TPYVEASDISNAVCFLAS-DESRYVTGLQFKVDAGA  283 (287)
T ss_dssp             HHGGGGCSSS-CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             hhhhhhcccC-CCCCCHHHHHhhHheecc-hhhcCCCCceEeECchh
Confidence            0      011 456789999999999997 889999999887 5554

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=4.2e-41  Score=283.84  Aligned_cols=231  Identities=19%  Similarity=0.202  Sum_probs=195.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++...+++.++.++.+|++|.++++++++++.+.++ +|+|
T Consensus        11 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id~l   89 (260)
T 2z1n_A           11 VVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-ADIL   89 (260)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CSEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CCEE
Confidence            699999999999999999999999999999998888888776543334789999999999999999999999988 9999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+              
T Consensus        90 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  150 (260)
T 2z1n_A           90 VYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-----WGRMVYIGSVTLLRP--------------  150 (260)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEECchhhcCC--------------
Confidence            999997643  23567789999999999999999999999998765     589999999988753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC----------ChH---HHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH----------SAV---VMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~----------~~~---~~~~~~~~~~~~~~  225 (288)
                       .++...|++||++++.+++.++.++++.|  |+||+|+||++.|++...          ...   ...+....+..++.
T Consensus       151 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  227 (260)
T 2z1n_A          151 -WQDLALSNIMRLPVIGVVRTLALELAPHG--VTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVG  227 (260)
T ss_dssp             -CTTBHHHHHHTHHHHHHHHHHHHHHGGGT--EEEEEEEECHHHHCCCC-----------------------CCTTSSCC
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCcc
Confidence             56778999999999999999999999999  999999999999998762          111   11111223455667


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|+|+|+.++||++ +...++||+.|. ++|
T Consensus       228 ~~~dva~~v~~l~s-~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          228 KPEELASVVAFLAS-EKASFITGAVIPVDGG  257 (260)
T ss_dssp             CHHHHHHHHHHHTS-GGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhC-ccccCCCCCEEEeCCC
Confidence            99999999999997 778999999887 554

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4.7e-41  Score=284.91  Aligned_cols=231  Identities=19%  Similarity=0.208  Sum_probs=196.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAA-RNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++ ++.+..++...++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        29 lITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  106 (269)
T 3gk3_A           29 FVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVLADFGKVDV  106 (269)
T ss_dssp             EETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998 6666666666666544  567999999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+             
T Consensus       107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  168 (269)
T 3gk3_A          107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-----FGRIVNIGSVNGSRG-------------  168 (269)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC-------------
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEeCChhhccC-------------
Confidence            9999998754  33667889999999999999999999999998865     689999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH---HHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM---RFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~  234 (288)
                        .++...|++||+|+++|+++++.+++.+|  |+||+|+||+++|++........   .+....+..++.+|+|+|+.+
T Consensus       169 --~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v  244 (269)
T 3gk3_A          169 --AFGQANYASAKAGIHGFTKTLALETAKRG--ITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALI  244 (269)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHH
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHH
Confidence              66778999999999999999999999999  99999999999999987642111   112234555667999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +...++||+.|. |+|.
T Consensus       245 ~~L~s-~~~~~itG~~i~vdgG~  266 (269)
T 3gk3_A          245 AFLCS-DDAGFVTGADLAINGGM  266 (269)
T ss_dssp             HHHTS-TTCTTCCSCEEEESTTS
T ss_pred             HHHhC-CCcCCeeCcEEEECCCE
Confidence            99997 788999999887 4443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.8e-41  Score=280.09  Aligned_cols=226  Identities=19%  Similarity=0.209  Sum_probs=192.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++     +  +.++.+|++|.++++++++++.+.++++|+|
T Consensus         9 lVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            9 LITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----G--AHPVVMDVADPASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----T--CEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----C--CEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988776655432     2  7889999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|+|.+++     .++||++||.. ..+              
T Consensus        82 vn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~-~~~--------------  141 (245)
T 1uls_A           82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-----PGSIVLTASRV-YLG--------------  141 (245)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-----CEEEEEECCGG-GGC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEEccch-hcC--------------
Confidence            999998654  23567789999999999999999999999997754     58999999988 542              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||+++..|+++++.+++++|  |+||+|+||+++|++......  ...+....+..++.+|+|+|+.++|
T Consensus       142 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~  218 (245)
T 1uls_A          142 -NLGQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALF  218 (245)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHH
Confidence             45678899999999999999999999999  999999999999999765421  1122222345567899999999999


Q ss_pred             HhcCCCccCCCceeec-cCccC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |++ +...+++|+.+. ++|..
T Consensus       219 l~s-~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          219 LLS-DESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHS-GGGTTCCSCEEEESTTTT
T ss_pred             HhC-chhcCCcCCEEEECCCcc
Confidence            997 778899999887 55543

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8e-41  Score=284.38  Aligned_cols=234  Identities=26%  Similarity=0.281  Sum_probs=195.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...  + ++.++.+|++|.++++++++++.+.++++|+|
T Consensus        33 lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  109 (276)
T 2b4q_A           33 LVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQALGELSARLDIL  109 (276)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999888887777542  2 78899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.+++.. ...++||++||..+..+              
T Consensus       110 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~-~~~g~iV~isS~~~~~~--------------  174 (276)
T 2b4q_A          110 VNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA-ENPARVINIGSVAGISA--------------  174 (276)
T ss_dssp             EECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS-SSCEEEEEECCGGGTCC--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC-CCCCEEEEECCHHHcCC--------------
Confidence            999998654  3367788999999999999999999999999876410 01289999999987753              


Q ss_pred             CCCccc-cchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHH--HHHhhhcCChHHHHHH
Q 023054          159 GYSDKK-AYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLK--FFSFFLWKNVPQGAAT  233 (288)
Q Consensus       159 ~~~~~~-~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~--~~~~~~~~~~~~~a~~  233 (288)
                       .+... .|++||++++.|++.++.++++.|  |+||+|+||++.|++.....  ....+..  ..+..++.+|+|+|+.
T Consensus       175 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  251 (276)
T 2b4q_A          175 -MGEQAYAYGPSKAALHQLSRMLAKELVGEH--INVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAAL  251 (276)
T ss_dssp             -CCCSCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHH
T ss_pred             -CCCCccccHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHH
Confidence             34455 899999999999999999999999  99999999999999875421  1111222  2345567799999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++||++ +...+++|+.|. ++|+
T Consensus       252 v~~l~s-~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          252 AISLAG-TAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             HHHHhC-ccccCCCCCEEEeCCCc
Confidence            999997 678899999887 5543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=5.4e-41  Score=284.69  Aligned_cols=229  Identities=20%  Similarity=0.136  Sum_probs=183.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        32 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           32 IVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999988887776     3578999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+..+   ..+.+.++|++.+++|+.++++++++++|.|.+++.   ..|+||++||..+..+             
T Consensus       107 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~---~~g~IV~isS~~~~~~-------------  170 (272)
T 4dyv_A          107 FNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP---RGGRIINNGSISATSP-------------  170 (272)
T ss_dssp             EECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS---CCEEEEEECCSSTTSC-------------
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC---CCcEEEEECchhhcCC-------------
Confidence            999998643   346788999999999999999999999999987531   1479999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH-HHHHHHHHhhhcCChHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV-MRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                        .++...|++||+|+++|+++++.+++.++  |+||+|+||+++|++....... .......+..++.+|+|+|+.++|
T Consensus       171 --~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~f  246 (272)
T 4dyv_A          171 --RPYSAPYTATKHAITGLTKSTSLDGRVHD--IACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVY  246 (272)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEEECC------------------------CHHHHHHHHHH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhCccC--EEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHH
Confidence              66778999999999999999999999999  9999999999999997654211 112223455667899999999999


Q ss_pred             HhcCCCccCCCceeeccC
Q 023054          237 VALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~~~  254 (288)
                      |++.+....+++..+.+.
T Consensus       247 L~s~~~~~~~~~i~i~~~  264 (272)
T 4dyv_A          247 MASLPLDANVQFMTIMAT  264 (272)
T ss_dssp             HHHSCTTSCCCEEEEEEC
T ss_pred             HhCCCCcCccceEEEecc
Confidence            999766666666665444

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.5e-40  Score=280.40  Aligned_cols=231  Identities=19%  Similarity=0.243  Sum_probs=197.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        18 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   95 (260)
T 2zat_A           18 LVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDIL   95 (260)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999888888777655  4578899999999999999999999999999999


Q ss_pred             EEccccCC---CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+..   +..+.+.++|++.+++|+.+++.++++++|+|.+++     .++||++||..+..+             
T Consensus        96 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  157 (260)
T 2zat_A           96 VSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-----GGSVLIVSSVGAYHP-------------  157 (260)
T ss_dssp             EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTSC-------------
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEEechhhcCC-------------
Confidence            99999753   233567788999999999999999999999998764     589999999987753             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                        .++...|++||++++.|++.++.++++.|  |+||+|+||++.|++....    .....+....+..++.+|+|+|+.
T Consensus       158 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  233 (260)
T 2zat_A          158 --FPNLGPYNVSKTALLGLTKNLAVELAPRN--IRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGI  233 (260)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHH
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence              56778999999999999999999999999  9999999999999986431    111122333455667899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++||++ +...+++|+.|. ++|.
T Consensus       234 v~~l~s-~~~~~~tG~~~~vdgG~  256 (260)
T 2zat_A          234 VSFLCS-EDASYITGETVVVGGGT  256 (260)
T ss_dssp             HHHHTS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHcC-cccCCccCCEEEECCCc
Confidence            999997 778899999877 4443

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.1e-40  Score=281.22  Aligned_cols=231  Identities=23%  Similarity=0.292  Sum_probs=196.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-CCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-LPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.+ +++|+
T Consensus        13 lVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   90 (260)
T 2ae2_A           13 LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVANHFHGKLNI   90 (260)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            69999999999999999999999999999999888888877654  4578999999999999999999999988 89999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .++||++||..+..+             
T Consensus        91 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  152 (260)
T 2ae2_A           91 LVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-----RGNVVFISSVSGALA-------------  152 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-----SEEEEEECCGGGTSC-------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcchhhccC-------------
Confidence            9999998643  23567789999999999999999999999998764     589999999987653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---h-HHH---HHHHHHHhhhcCChHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---A-VVM---RFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~-~~~---~~~~~~~~~~~~~~~~~  230 (288)
                        .++...|++||++++.|+++++.+++++|  |+||+|+||++.|++....   . ...   .+....+..++.+|+|+
T Consensus       153 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  228 (260)
T 2ae2_A          153 --VPYEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKEL  228 (260)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHH
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHH
Confidence              56678999999999999999999999999  9999999999999975421   1 111   12222344567799999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+.++||++ +...+++|+.+. ++|.
T Consensus       229 A~~v~~l~s-~~~~~~tG~~~~vdgG~  254 (260)
T 2ae2_A          229 AAMVAFLCF-PAASYVTGQIIYVDGGL  254 (260)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHcC-ccccCCCCCEEEECCCc
Confidence            999999997 778899999887 5554

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=7.1e-41  Score=286.84  Aligned_cols=235  Identities=17%  Similarity=0.159  Sum_probs=195.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHhhCCCCceEEEEecCCChH-----------------H
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAA-RNMAAANEARQLILKEDDTARVDTLKLDLSSIA-----------------S   62 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----------------~   62 (288)
                      |||||++|||+++|+.|+++|++|++++ |+.+.++++.+++.... +.++.++.+|++|.+                 +
T Consensus        13 lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~   91 (291)
T 1e7w_A           13 LVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAPVTLFTR   91 (291)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----CCCBCHHHH
T ss_pred             EEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCcccccccccccccccchHHH
Confidence            6999999999999999999999999999 99998888888876333 467999999999999                 9


Q ss_pred             HHHHHHHHHhcCCCcceEEEccccCCC--CCCCC--------------CCcchhhhhhhhhHHHHHHHhhHHHHHHhhcc
Q 023054           63 IKDFAQNFIALNLPLNILINNAGIMFC--PYQIS--------------EDGIEMQFATNHIGHFLLTNLLLDTMNRTAKE  126 (288)
Q Consensus        63 ~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  126 (288)
                      ++++++++.+.++++|+||||||+...  ..+.+              .++|+.++++|+.+++++++.++|+|.+++..
T Consensus        92 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~  171 (291)
T 1e7w_A           92 CAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK  171 (291)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGG
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999998643  23455              77899999999999999999999999864311


Q ss_pred             -CCCCCeEEEEcCccccccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          127 -TGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       127 -~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                       ....++||++||..+..+               .++...|++||+++.+|+++++.+++++|  |+||+|+||+++|++
T Consensus       172 ~~~~~g~Iv~isS~~~~~~---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          172 HRGTNYSIINMVDAMTNQP---------------LLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGLSVLVD  234 (291)
T ss_dssp             GSCSCEEEEEECCTTTTSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCCGG
T ss_pred             CCCCCcEEEEEechhhcCC---------------CCCCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEEeeCCccCCc
Confidence             111379999999987753               56778999999999999999999999999  999999999999998


Q ss_pred             CCCChH--HHHHHHHHHhh-hcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          206 FKHSAV--VMRFLKFFSFF-LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       206 ~~~~~~--~~~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                       . ...  ...+....+.. ++.+|+|+|+.++||++ +...++||++|. |+|+
T Consensus       235 -~-~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG~  286 (291)
T 1e7w_A          235 -D-MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGGY  286 (291)
T ss_dssp             -G-SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             -c-CCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-CcccCccCcEEEECCCc
Confidence             4 311  11122223444 67899999999999997 788999999887 5554

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.5e-41  Score=286.47  Aligned_cols=221  Identities=21%  Similarity=0.266  Sum_probs=188.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+..            ...+.++.+|++|.++++++++++.+.++++|+|
T Consensus        18 lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   85 (269)
T 3vtz_A           18 IVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL   85 (269)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999987543            1256788999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+              
T Consensus        86 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  146 (269)
T 3vtz_A           86 VNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-----HGSIINIASVQSYAA--------------  146 (269)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSB--------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEECchhhccC--------------
Confidence            999998654  23667789999999999999999999999998865     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------------hHHHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------------AVVMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~~~~  225 (288)
                       .++...|++||+|+++|+++++.++++ +  |+||+|+||++.|++....             .....+....+..++.
T Consensus       147 -~~~~~~Y~asKaa~~~l~~~la~e~~~-~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  222 (269)
T 3vtz_A          147 -TKNAAAYVTSKHALLGLTRSVAIDYAP-K--IRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIG  222 (269)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHTT-T--EEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCB
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHhcC-C--CEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCc
Confidence             567789999999999999999999998 7  9999999999999985432             1112233344666778


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +|+|+|+.++||++ +.+.++||+.|. |+|..
T Consensus       223 ~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          223 RPEEVAEVVAFLAS-DRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHhC-CccCCCcCcEEEECCCcc
Confidence            99999999999997 788999999887 66654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=9.3e-42  Score=292.28  Aligned_cols=229  Identities=27%  Similarity=0.284  Sum_probs=193.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAAN-EARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+.+... ...+.+...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        51 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           51 LITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999876543 444444433  567999999999999999999999999999999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ||||||+...   ..+.+.++|++.+++|+.++++++++++|+|.+       .++||++||..+..+            
T Consensus       129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~------------  189 (291)
T 3ijr_A          129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ-------GDVIINTASIVAYEG------------  189 (291)
T ss_dssp             EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT-------TCEEEEECCTHHHHC------------
T ss_pred             EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCEEEEEechHhcCC------------
Confidence            9999998643   235678899999999999999999999999854       479999999998763            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHHHhhhcCChHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                         .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++....   .....+....+..++.+|+|+|+.
T Consensus       190 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  264 (291)
T 3ijr_A          190 ---NETLIDYSATKGAIVAFTRSLSQSLVQKG--IRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPA  264 (291)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHH
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHH
Confidence               56778999999999999999999999999  9999999999999985432   111112223456677899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++||++ +...++||+.|. |+|.
T Consensus       265 v~~L~s-~~~~~itG~~i~vdGG~  287 (291)
T 3ijr_A          265 YVYLAS-SDSSYVTGQMIHVNGGV  287 (291)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESSSC
T ss_pred             HHHHhC-CccCCCcCCEEEECCCc
Confidence            999997 788999999887 5554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=4e-41  Score=283.75  Aligned_cols=223  Identities=18%  Similarity=0.158  Sum_probs=182.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.+.+....   .    .+.++.+|++|.++++++++++.+.++++|+|
T Consensus        31 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           31 LITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ---A----GAVALYGDFSCETGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH---H----TCEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh---c----CCeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6999999999999999999999999999998765443332   2    27889999999999999999999999999999


Q ss_pred             EEccccCCCC-CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||||+.... .+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+               
T Consensus       104 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~---------------  163 (260)
T 3gem_A          104 VHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-----VADIVHISDDVTRKG---------------  163 (260)
T ss_dssp             EECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-----SCEEEEECCGGGGTC---------------
T ss_pred             EECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CcEEEEECChhhcCC---------------
Confidence            9999986543 3556688999999999999999999999998765     589999999998763               


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhc
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  239 (288)
                      .++...|++||+|+++|+++++.++++ +  |+||+|+||++.|++..............+..+..+|+|+|+.++||+ 
T Consensus       164 ~~~~~~Y~asKaa~~~l~~~la~e~~~-~--Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~-  239 (260)
T 3gem_A          164 SSKHIAYCATKAGLESLTLSFAARFAP-L--VKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLL-  239 (260)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHH-
T ss_pred             CCCcHhHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh-
Confidence            667789999999999999999999998 6  999999999999998654433444445556677789999999999999 


Q ss_pred             CCCccCCCceeec-cCcc
Q 023054          240 HPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       240 ~~~~~~~tG~~~~-~~~~  256 (288)
                        +..++||+.|. |+|.
T Consensus       240 --~~~~itG~~i~vdGG~  255 (260)
T 3gem_A          240 --DSTYVTGTTLTVNGGR  255 (260)
T ss_dssp             --HCSSCCSCEEEESTTT
T ss_pred             --hCCCCCCCEEEECCCc
Confidence              35899999887 5554

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-40  Score=281.31  Aligned_cols=235  Identities=19%  Similarity=0.192  Sum_probs=190.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.....+...+..... +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   89 (264)
T 3i4f_A           11 LITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFL   89 (264)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            699999999999999999999999999877655444333333322 4679999999999999999999999999999999


Q ss_pred             EEccccC--CC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc-ccccCCccccCCC
Q 023054           81 INNAGIM--FC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ-YTYKGGIRFQKIN  155 (288)
Q Consensus        81 v~~ag~~--~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~~~~  155 (288)
                      |||||+.  ..  ..+.+.++|++.+++|+.+++.++++++|.|.+++     .++||++||.... ..           
T Consensus        90 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~iss~~~~~~~-----------  153 (264)
T 3i4f_A           90 INNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-----FGRIINYGFQGADSAP-----------  153 (264)
T ss_dssp             ECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTTGGGCC-----------
T ss_pred             EECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-----CCeEEEEeechhcccC-----------
Confidence            9999943  22  23667789999999999999999999999998875     6899999998432 21           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH--HHHHHHHhhhcCChHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM--RFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~  233 (288)
                         ++++...|++||+|++.|+++++.+++++|  |+||+|+||++.|++........  ......+..++.+|+|+|+.
T Consensus       154 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  228 (264)
T 3i4f_A          154 ---GWIYRSAFAAAKVGLVSLTKTVAYEEAEYG--ITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIART  228 (264)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHH
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence               356678999999999999999999999999  99999999999999987663211  12334566778899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCccCC
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      ++||++ +...++||+.|. ++|...
T Consensus       229 v~~l~s-~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          229 ISFLCE-DDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESCSCCC
T ss_pred             HHHHcC-cccCCCCCcEEEEcCceee
Confidence            999997 788999999888 555543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2e-40  Score=280.70  Aligned_cols=231  Identities=21%  Similarity=0.236  Sum_probs=199.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++ ..|+.+..++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        30 lVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (267)
T 4iiu_A           30 LVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLEHEIAQHGAWYG  107 (267)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            69999999999999999999999866 557888888888888766  467999999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+....  .+.+.++|++.+++|+.+++.+++.+++.|.+...    .++||++||..+..+             
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~g~iv~isS~~~~~~-------------  170 (267)
T 4iiu_A          108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ----GGRIITLSSVSGVMG-------------  170 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCHHHHHC-------------
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEEcchHhccC-------------
Confidence            99999987543  36678899999999999999999999998874321    689999999998874             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                        .++...|++||+|++.|++.++.+++++|  |+||+|+||+++|++...... ........+..++.+|+|+|+.++|
T Consensus       171 --~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~  246 (267)
T 4iiu_A          171 --NRGQVNYSAAKAGIIGATKALAIELAKRK--ITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASY  246 (267)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence              66778999999999999999999999999  999999999999999876522 2223344566677899999999999


Q ss_pred             HhcCCCccCCCceeec-cCc
Q 023054          237 VALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |++ +...++||+.|. |+|
T Consensus       247 L~s-~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          247 LMS-DIAGYVTRQVISINGG  265 (267)
T ss_dssp             HHS-GGGTTCCSCEEEESTT
T ss_pred             HhC-CcccCccCCEEEeCCC
Confidence            997 788999999887 554

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=9.6e-42  Score=292.61  Aligned_cols=229  Identities=23%  Similarity=0.201  Sum_probs=193.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC--hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN--MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||+++|++|+++|++|++++|+  .+..+++.+.+...  +.++.++.+|++|.++++++++++.+.++++|
T Consensus        53 lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  130 (294)
T 3r3s_A           53 LVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKAREALGGLD  130 (294)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            699999999999999999999999999987  34455555555544  56799999999999999999999999999999


Q ss_pred             eEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||+...   ..+.+.++|++.+++|+.++++++++++|.|.+       .|+||++||..+..+           
T Consensus       131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~-----------  192 (294)
T 3r3s_A          131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-------GASIITTSSIQAYQP-----------  192 (294)
T ss_dssp             EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCGGGTSC-----------
T ss_pred             EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECChhhccC-----------
Confidence            99999998542   346788999999999999999999999999854       479999999998763           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a  231 (288)
                          .++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++....    .....+....+..++.+|+|+|
T Consensus       193 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  266 (294)
T 3r3s_A          193 ----SPHLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELA  266 (294)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence                66778999999999999999999999999  9999999999999873211    1122223345667778999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCcc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.++||++ +.+.++||+.|. |+|.
T Consensus       267 ~~v~~L~s-~~~~~itG~~i~vdGG~  291 (294)
T 3r3s_A          267 PVYVYLAS-QESSYVTAEVHGVCGGE  291 (294)
T ss_dssp             HHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHHhC-ccccCCCCCEEEECCCc
Confidence            99999997 889999999887 5554

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=6.7e-41  Score=280.81  Aligned_cols=228  Identities=25%  Similarity=0.300  Sum_probs=184.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|+. +.+++   .+...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        11 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A           11 VITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999999998 66554   33332  457899999999999999999999998999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .++||++||..+..+             
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  147 (249)
T 2ew8_A           86 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-----WGRIINLTSTTYWLK-------------  147 (249)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGGSC-------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CeEEEEEcchhhccC-------------
Confidence            9999998653  23567789999999999999999999999998765     589999999988763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCC-CChHH-HHHHHH--HHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFK-HSAVV-MRFLKF--FSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~-~~~~~-~~~~~~--~~~~~~~~~~~~a~~  233 (288)
                        .++...|++||++++.|+++++.++++.|  |+||+|+||++.|++.. ..... ......  .+..++.+|+|+|+.
T Consensus       148 --~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~  223 (249)
T 2ew8_A          148 --IEAYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGA  223 (249)
T ss_dssp             --CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC------------------CTTSSSCSCCCTHHHHHH
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHH
Confidence              56678999999999999999999999999  99999999999999865 32100 011111  234456799999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++||++ +...+++|+.|. ++|.
T Consensus       224 ~~~l~s-~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          224 AAFLAS-DDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHHHTS-GGGTTCCSCEEEESSSC
T ss_pred             HHHHcC-cccCCCCCcEEEECCCc
Confidence            999997 778899999887 5554

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.1e-40  Score=281.72  Aligned_cols=232  Identities=19%  Similarity=0.243  Sum_probs=196.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++++.+++.... +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   89 (263)
T 3ai3_A           11 VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRSSFGGADIL   89 (263)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999998888877776542 3468999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.+++     .++||++||..+..+              
T Consensus        90 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  150 (263)
T 3ai3_A           90 VNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-----GGAIIHNASICAVQP--------------  150 (263)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECchhhcCC--------------
Confidence            999998643  23567789999999999999999999999998764     589999999988753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---------H----HHHHHH-HHhhhc
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---------V----MRFLKF-FSFFLW  224 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---------~----~~~~~~-~~~~~~  224 (288)
                       .++...|++||++++.+++.++.++++.|  |+||+|+||++.|++......         .    ..+... .+..++
T Consensus       151 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  227 (263)
T 3ai3_A          151 -LWYEPIYNVTKAALMMFSKTLATEVIKDN--IRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRF  227 (263)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSC
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCC
Confidence             45678899999999999999999999999  999999999999997543210         1    111112 344567


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .+|+|+|+.++||++ +...+++|+.|. ++|.
T Consensus       228 ~~~~dvA~~~~~l~s-~~~~~~~G~~~~vdgG~  259 (263)
T 3ai3_A          228 ASPEELANFFVFLCS-ERATYSVGSAYFVDGGM  259 (263)
T ss_dssp             BCHHHHHHHHHHHTS-TTCTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHcC-ccccCCCCcEEEECCCc
Confidence            899999999999997 778899999877 5543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=9.7e-41  Score=284.09  Aligned_cols=231  Identities=23%  Similarity=0.285  Sum_probs=196.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+++.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        26 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l  103 (277)
T 2rhc_B           26 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVL  103 (277)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999999888888877654  4578999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHH--HHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDT--MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.  |.+++     .++||++||..+..+            
T Consensus       104 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~------------  166 (277)
T 2rhc_B          104 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-----TGRIVNIASTGGKQG------------  166 (277)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-----EEEEEEECCGGGTSC------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-----CeEEEEECccccccC------------
Confidence            999998653  235677889999999999999999999999  87754     589999999987653            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------------HHHHHHHHHHhhh
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------------VVMRFLKFFSFFL  223 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~~  223 (288)
                         .++...|++||++++.|+++++.++++.|  |+||+|+||++.|++.....             ....+....+..+
T Consensus       167 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  241 (277)
T 2rhc_B          167 ---VVHAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGR  241 (277)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHTTTE--EEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSS
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCC
Confidence               56678999999999999999999999988  99999999999999854321             0011112234456


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.+|+|+|+.++||++ +...+++|+.|. ++|+
T Consensus       242 ~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          242 YVQPSEVAEMVAYLIG-PGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhC-chhcCCCCcEEEECCCc
Confidence            7799999999999997 778899999887 5554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=4.9e-40  Score=275.23  Aligned_cols=225  Identities=24%  Similarity=0.311  Sum_probs=191.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   88 (247)
T 2jah_A           11 LITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEALGGLDIL   88 (247)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999999988888887654  4578999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.++      +|+||++||..+..+              
T Consensus        89 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~--------------  148 (247)
T 2jah_A           89 VNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS------KGTVVQMSSIAGRVN--------------  148 (247)
T ss_dssp             EECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTCC--------------
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------CCEEEEEccHHhcCC--------------
Confidence            999998643  3366778999999999999999999999999875      379999999988753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhc--CChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLW--KNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~--~~~~~~a~~~  234 (288)
                       .++...|++||+++++|+++++.+++++|  |+||+|+||+++|++.....  .........+ .++  .+|+|+|+.+
T Consensus       149 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~v  224 (247)
T 2jah_A          149 -VRNAAVYQATKFGVNAFSETLRQEVTERG--VRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKLQAQDIAEAV  224 (247)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCBCHHHHHHHH
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCCCHHHHHHHH
Confidence             56778999999999999999999999999  99999999999999865431  1111112222 344  7999999999


Q ss_pred             HHHhcCCCccCCCceeec
Q 023054          235 CYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~  252 (288)
                      +|+++ +...++++.+..
T Consensus       225 ~~l~s-~~~~~~~~~i~i  241 (247)
T 2jah_A          225 RYAVT-APHHATVHEIFI  241 (247)
T ss_dssp             HHHHH-SCTTEEEEEEEE
T ss_pred             HHHhC-CCccCccceEEe
Confidence            99998 667777776543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-41  Score=285.25  Aligned_cols=233  Identities=22%  Similarity=0.235  Sum_probs=195.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...+. ..++.++.+|++|.++++++++++.+.++++|+
T Consensus        10 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   89 (280)
T 1xkq_A           10 IITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDV   89 (280)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999999999998888887765421 117899999999999999999999999999999


Q ss_pred             EEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           80 LINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        80 lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      ||||||+...      ..+.+.++|++.+++|+.+++.++++++|.|.++      +++||++||..+..+         
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~---------  154 (280)
T 1xkq_A           90 LVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGPQ---------  154 (280)
T ss_dssp             EEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSS---------
T ss_pred             EEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC------CCcEEEecCccccCC---------
Confidence            9999998643      2356778899999999999999999999999765      379999999987653         


Q ss_pred             CCCCCCC-CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hH----HHHHHH----HHHh
Q 023054          154 INDRAGY-SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AV----VMRFLK----FFSF  221 (288)
Q Consensus       154 ~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~----~~~~~~----~~~~  221 (288)
                            . ++...|++||++++.|+++++.++++.|  |+||+|+||++.|++....   ..    ......    ..+.
T Consensus       155 ------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  226 (280)
T 1xkq_A          155 ------AQPDFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI  226 (280)
T ss_dssp             ------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT
T ss_pred             ------CCCcccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCC
Confidence                  3 5678899999999999999999999999  9999999999999986532   00    011111    1244


Q ss_pred             hhcCChHHHHHHHHHHhcCCC-ccCCCceeec-cCccC
Q 023054          222 FLWKNVPQGAATTCYVALHPN-LKGVTGKYFL-DCNEM  257 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~-~~~~tG~~~~-~~~~~  257 (288)
                      .++.+|+|+|+.++||++ +. ..+++|+.|. ++|..
T Consensus       227 ~~~~~pedvA~~v~~l~s-~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          227 GAAGKPEHIANIILFLAD-RNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             SSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTGG
T ss_pred             CCCCCHHHHHHHHHHhcC-cccccCccCCeEEECCCcc
Confidence            566799999999999997 66 7899999887 55543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.3e-41  Score=286.81  Aligned_cols=232  Identities=23%  Similarity=0.274  Sum_probs=195.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.++++.+++...+. ..++.++.+|++|.++++++++++.+.++++|+
T Consensus        30 lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  109 (297)
T 1xhl_A           30 IITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDI  109 (297)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999999999999999998888888765421 117899999999999999999999999999999


Q ss_pred             EEEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           80 LINNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        80 lv~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ||||||+...    ..+.+.++|++.+++|+.+++.++++++|.|.++      +|+||++||..+..+           
T Consensus       110 lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~IV~isS~~~~~~-----------  172 (297)
T 1xhl_A          110 LVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT------KGEIVNVSSIVAGPQ-----------  172 (297)
T ss_dssp             EEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGSSS-----------
T ss_pred             EEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc------CCEEEEEcCchhccC-----------
Confidence            9999998643    2356778999999999999999999999999864      379999999987653           


Q ss_pred             CCCCC-CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--H-----HHHHHH----HHHhhh
Q 023054          156 DRAGY-SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--V-----VMRFLK----FFSFFL  223 (288)
Q Consensus       156 ~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~-----~~~~~~----~~~~~~  223 (288)
                          . ++...|++||++++.|++.++.++++.|  |+||+|+||++.|++.....  .     ......    ..+..+
T Consensus       173 ----~~~~~~~Y~asKaa~~~l~~~la~el~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  246 (297)
T 1xhl_A          173 ----AHSGYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGH  246 (297)
T ss_dssp             ----CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSS
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCC
Confidence                3 5678899999999999999999999999  99999999999999865320  0     001111    124456


Q ss_pred             cCChHHHHHHHHHHhcCCC-ccCCCceeec-cCcc
Q 023054          224 WKNVPQGAATTCYVALHPN-LKGVTGKYFL-DCNE  256 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~-~~~~tG~~~~-~~~~  256 (288)
                      +.+|+|+|+.++||++ +. +.+++|+.|. ++|.
T Consensus       247 ~~~pedvA~~v~~l~s-~~~~~~itG~~i~vdGG~  280 (297)
T 1xhl_A          247 CGKPEEIANIIVFLAD-RNLSSYIIGQSIVADGGS  280 (297)
T ss_dssp             CBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHhC-CcccCCccCcEEEECCCc
Confidence            7799999999999997 66 8899999887 5554

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.2e-40  Score=281.90  Aligned_cols=235  Identities=15%  Similarity=0.102  Sum_probs=197.8

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|++|+++|++|++++|+....+...+ +....+..++.++.+|++|.++++++++++.+.++++|
T Consensus        11 lVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   89 (266)
T 3oig_A           11 VVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHE-LAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIH   89 (266)
T ss_dssp             EEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCCC
T ss_pred             EEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHH-HHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCee
Confidence            699999  679999999999999999999998755444443 44443345799999999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+...      ..+.+.++++..+++|+.+++.++++++|+|.+       .|+||++||..+..+        
T Consensus        90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~--------  154 (266)
T 3oig_A           90 GIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE-------GGSIVTLTYLGGELV--------  154 (266)
T ss_dssp             EEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGGGTSC--------
T ss_pred             EEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC-------CceEEEEeccccccc--------
Confidence            99999998652      236677899999999999999999999999864       579999999998763        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HHHHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~  228 (288)
                             .++...|++||+|+++|+++++.+++++|  |+||+|+||++.|++......    ...+....+..+..+|+
T Consensus       155 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  225 (266)
T 3oig_A          155 -------MPNYNVMGVAKASLDASVKYLAADLGKEN--IRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPE  225 (266)
T ss_dssp             -------CTTTHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             -------CCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHH
Confidence                   66778999999999999999999999999  999999999999998776532    22233344566678999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCccCCCCc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNEMPPSA  261 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~~~~  261 (288)
                      |+|+.++||++ +...++||+.|. |+|+.....
T Consensus       226 dva~~v~~l~s-~~~~~~tG~~i~vdGG~~~~~~  258 (266)
T 3oig_A          226 EVGDTAAFLFS-DMSRGITGENLHVDSGFHITAR  258 (266)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCCC
T ss_pred             HHHHHHHHHcC-CchhcCcCCEEEECCCeEEeee
Confidence            99999999997 788999999887 666654443

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.8e-40  Score=278.76  Aligned_cols=229  Identities=20%  Similarity=0.215  Sum_probs=187.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc-CCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL-NLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+. ++++|+
T Consensus         9 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~   86 (260)
T 2qq5_A            9 VVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDV   86 (260)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCE
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHhcCCCceE
Confidence            69999999999999999999999999999999888888887665  457899999999999999999998876 899999


Q ss_pred             EEEccc--cC-------CCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcc
Q 023054           80 LINNAG--IM-------FCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIR  150 (288)
Q Consensus        80 lv~~ag--~~-------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  150 (288)
                      ||||||  +.       .+..+.+.++|++.+++|+.+++++++.++|.|.+++     .|+||++||..+..       
T Consensus        87 lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~-------  154 (260)
T 2qq5_A           87 LVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-----QGLIVVISSPGSLQ-------  154 (260)
T ss_dssp             EEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-----CCEEEEECCGGGTS-------
T ss_pred             EEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-----CcEEEEEcChhhcC-------
Confidence            999995  32       2234677789999999999999999999999997754     58999999998764       


Q ss_pred             ccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH-----HHHH--HHHhhh
Q 023054          151 FQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM-----RFLK--FFSFFL  223 (288)
Q Consensus       151 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~-----~~~~--~~~~~~  223 (288)
                               ..+...|++||++++.|+++++.++++.|  |+||+|+||+++|++........     ....  ..+..+
T Consensus       155 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T 2qq5_A          155 ---------YMFNVPYGVGKAACDKLAADCAHELRRHG--VSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSS  223 (260)
T ss_dssp             ---------CCSSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCCSCTTTC----------------------CH
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhcc
Confidence                     22457899999999999999999999999  99999999999999975421100     0011  112233


Q ss_pred             cCChHHHHHHHHHHhcCCCc-cCCCceeeccCc
Q 023054          224 WKNVPQGAATTCYVALHPNL-KGVTGKYFLDCN  255 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~-~~~tG~~~~~~~  255 (288)
                      ..+|+|+|+.++||++ +.. .++||++|..++
T Consensus       224 ~~~pe~va~~v~~l~s-~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          224 AETTELSGKCVVALAT-DPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHHHHHHHHHHHHHT-CTTGGGGTTCEEEHHH
T ss_pred             CCCHHHHHHHHHHHhc-Ccccccccceeechhh
Confidence            4689999999999998 544 589999987553

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-41  Score=287.23  Aligned_cols=234  Identities=19%  Similarity=0.165  Sum_probs=192.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++...+ +..+.++.+|++|.++++++++++.+.++++|+|
T Consensus        37 lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  115 (281)
T 4dry_A           37 LVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLL  115 (281)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999999998888887653 3346899999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.++++++++++|.|.++..   ..|+||++||..+..+             
T Consensus       116 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~---~~g~IV~isS~~~~~~-------------  179 (281)
T 4dry_A          116 VNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTP---RGGRIINNGSISAQTP-------------  179 (281)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS---CCEEEEEECCGGGTCC-------------
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CCcEEEEECCHHhCCC-------------
Confidence            999998643   346788999999999999999999999999987521   1479999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH-HHHHHHHHhhhcCChHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV-MRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                        .++...|++||+|+++|+++++.|++.+|  |+||+|+||+++|++....... .......+..++.+|+|+|+.++|
T Consensus       180 --~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~f  255 (281)
T 4dry_A          180 --RPNSAPYTATKHAITGLTKSTALDGRMHD--IACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVY  255 (281)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHH
T ss_pred             --CCCChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHH
Confidence              66778999999999999999999999999  9999999999999987643100 000011233456799999999999


Q ss_pred             HhcCCCccCCCceeeccCc
Q 023054          237 VALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~~~~  255 (288)
                      |++.+....+++..+....
T Consensus       256 L~s~~~~~~i~~~~i~p~~  274 (281)
T 4dry_A          256 MASLPLSANVLTMTVMATR  274 (281)
T ss_dssp             HHHSCTTEEEEEEEEEETT
T ss_pred             HhCCCccCccccEEEEecc
Confidence            9997777777777776443

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=5.8e-40  Score=277.12  Aligned_cols=222  Identities=21%  Similarity=0.246  Sum_probs=186.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        33 lITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l  110 (262)
T 3rkr_A           33 VVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVLAAHGRCDVL  110 (262)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999999988888765  5679999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.+++.++++++|+|.+++     .|+||++||..+..+             
T Consensus       111 v~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  172 (262)
T 3rkr_A          111 VNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-----RGHIINISSLAGKNP-------------  172 (262)
T ss_dssp             EECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CCEEEEECSSCSSCC-------------
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CceEEEEechhhcCC-------------
Confidence            999998422   33677889999999999999999999999998765     689999999988763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                        .++...|++||+++++|+++++.+++..|  |+||+|+||+++|++.....      ...+.....+|+|+|+.++||
T Consensus       173 --~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~p~dvA~~v~~l  242 (262)
T 3rkr_A          173 --VADGAAYTASKWGLNGLMTSAAEELRQHQ--VRVSLVAPGSVRTEFGVGLS------AKKSALGAIEPDDIADVVALL  242 (262)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC----------------------CCCHHHHHHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCCcCCcccccc------cccccccCCCHHHHHHHHHHH
Confidence              66778999999999999999999999999  99999999999999876542      122445567999999999999


Q ss_pred             hcCCCccCCCceeecc
Q 023054          238 ALHPNLKGVTGKYFLD  253 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~~  253 (288)
                      ++ +...+++|+.+..
T Consensus       243 ~s-~~~~~~~g~~~i~  257 (262)
T 3rkr_A          243 AT-QADQSFISEVLVR  257 (262)
T ss_dssp             HT-CCTTCCEEEEEEE
T ss_pred             hc-CccccccCcEEec
Confidence            97 6777888887653

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=7.7e-41  Score=290.61  Aligned_cols=235  Identities=20%  Similarity=0.188  Sum_probs=196.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC----------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN----------MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |||||++|||+++|+.|+++|++|++++|+          .+.+++..+++...  +.++.++.+|++|.++++++++++
T Consensus        31 lVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  108 (322)
T 3qlj_A           31 IVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADWDQAAGLIQTA  108 (322)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSHHHHHHHHHHH
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            699999999999999999999999999998          67788888888765  467999999999999999999999


Q ss_pred             HhcCCCcceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC-CCCCeEEEEcCccccccccC
Q 023054           71 IALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET-GIEGRIVNLSSIAHQYTYKG  147 (288)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~  147 (288)
                      .+.++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|+|.+..... ...|+||++||..+..+   
T Consensus       109 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~---  185 (322)
T 3qlj_A          109 VETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG---  185 (322)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC---
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC---
Confidence            99999999999999987543  3678889999999999999999999999998654211 12479999999998763   


Q ss_pred             CccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCCh
Q 023054          148 GIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (288)
                                  .++...|++||+|+++|+++++.++++.|  |+||+|+|| +.|++....... ............+|
T Consensus       186 ------------~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG-~~t~~~~~~~~~-~~~~~~~~~~~~~p  249 (322)
T 3qlj_A          186 ------------SVGQGNYSAAKAGIATLTLVGAAEMGRYG--VTVNAIAPS-ARTRMTETVFAE-MMATQDQDFDAMAP  249 (322)
T ss_dssp             ------------BTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-TTSCCSCCSCCC---------CCTTCG
T ss_pred             ------------CCCCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEecCC-CCCccchhhhhh-hhhccccccCCCCH
Confidence                        56678999999999999999999999999  999999999 999987654211 11112233344689


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +|+|+.++||++ +...++||+.|. |+|..
T Consensus       250 edva~~v~~L~s-~~~~~itG~~i~vdGG~~  279 (322)
T 3qlj_A          250 ENVSPLVVWLGS-AEARDVTGKVFEVEGGKI  279 (322)
T ss_dssp             GGTHHHHHHHTS-GGGGGCCSCEEEEETTEE
T ss_pred             HHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence            999999999997 788999999887 56553

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2e-40  Score=280.64  Aligned_cols=233  Identities=19%  Similarity=0.186  Sum_probs=196.3

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAA-NEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||+  +|||+++|++|+++|++|++++|+.... ++..+++.... +.++.++.+|++|.++++++++++.+.++++
T Consensus        24 lITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  102 (267)
T 3gdg_A           24 VVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKDVVADFGQI  102 (267)
T ss_dssp             EETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             EEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            699999  9999999999999999999999876544 56666665543 4679999999999999999999999999999


Q ss_pred             ceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           78 NILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        78 d~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |+||||||+....  .+.+.++|++.+++|+.++++++++++|+|.+++     .++||++||..+..+..         
T Consensus       103 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~---------  168 (267)
T 3gdg_A          103 DAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-----TGSLVITASMSGHIANF---------  168 (267)
T ss_dssp             SEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSCCS---------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-----CceEEEEccccccccCC---------
Confidence            9999999987543  3667889999999999999999999999998875     68999999998875310         


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                          .++...|++||++++.|+++++.++++.   |+||+|+||+++|++......  ...+....+..+..+|+|+|+.
T Consensus       169 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~---i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~  241 (267)
T 3gdg_A          169 ----PQEQTSYNVAKAGCIHMARSLANEWRDF---ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGA  241 (267)
T ss_dssp             ----SSCCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHH
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHhccC---cEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhH
Confidence                1356789999999999999999999765   899999999999999865422  2223333456667789999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCcc
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++||++ +...++||+.|. |+|+
T Consensus       242 ~~~l~s-~~~~~itG~~i~vdgG~  264 (267)
T 3gdg_A          242 YVYFAS-DASTYTTGADLLIDGGY  264 (267)
T ss_dssp             HHHHHS-TTCTTCCSCEEEESTTG
T ss_pred             hheeec-CccccccCCEEEECCce
Confidence            999997 788999999887 5554

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=7.6e-40  Score=274.34  Aligned_cols=224  Identities=22%  Similarity=0.281  Sum_probs=179.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.++++.+++     ..++.++.+|+++.+++.+++++    .+++|+|
T Consensus        18 lVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~----~~~id~l   88 (249)
T 3f9i_A           18 LITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISK----TSNLDIL   88 (249)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHT----CSCCSEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHh----cCCCCEE
Confidence            69999999999999999999999999999999888877766     35688999999999998887764    3689999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.+++.++++++|.|.+++     .++||++||..+..+              
T Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  149 (249)
T 3f9i_A           89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-----YGRIINISSIVGIAG--------------  149 (249)
T ss_dssp             EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCCCC--C--------------
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CcEEEEEccHHhccC--------------
Confidence            9999987542  3567789999999999999999999999998765     689999999988763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||+|++.|+++++.+++.+|  |+||+|+||++.|++......  ...+....+..++.+|+|+|+.++|
T Consensus       150 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  226 (249)
T 3f9i_A          150 -NPGQANYCASKAGLIGMTKSLSYEVATRG--ITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAF  226 (249)
T ss_dssp             -CSCSHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHH
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             56778999999999999999999999999  999999999999999876522  2223344566677899999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |++ +...+++|+.|. ++|.
T Consensus       227 l~s-~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          227 LAS-NNASYITGQTLHVNGGM  246 (249)
T ss_dssp             HHS-GGGTTCCSCEEEESTTS
T ss_pred             HcC-CccCCccCcEEEECCCE
Confidence            997 788999999887 5544

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=3.4e-40  Score=282.30  Aligned_cols=236  Identities=21%  Similarity=0.182  Sum_probs=192.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHhhCCCCceEEEEecCCC----hHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-AAANEARQLILKEDDTARVDTLKLDLSS----IASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~~~~~~~~~   75 (288)
                      |||||++|||+++|+.|+++|++|++++|+. +.++++.+++.... +.++.++.+|++|    .++++++++++.+.++
T Consensus        27 lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g  105 (288)
T 2x9g_A           27 VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCEEIINSCFRAFG  105 (288)
T ss_dssp             EETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHHHHHHHHHHHHS
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHHHHHHHHHHhcC
Confidence            6999999999999999999999999999998 88888877776333 4678999999999    9999999999999899


Q ss_pred             CcceEEEccccCCCC-------CC-----CCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhcc-CCCCCeEEEEcCcccc
Q 023054           76 PLNILINNAGIMFCP-------YQ-----ISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKE-TGIEGRIVNLSSIAHQ  142 (288)
Q Consensus        76 ~id~lv~~ag~~~~~-------~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~  142 (288)
                      ++|+||||||+....       .+     .+.++|++.+++|+.+++.+++.++|.|.+++.. ....++||++||..+.
T Consensus       106 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  185 (288)
T 2x9g_A          106 RCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVD  185 (288)
T ss_dssp             CCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTT
T ss_pred             CCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccccc
Confidence            999999999986432       23     5567899999999999999999999999764210 0114799999999876


Q ss_pred             ccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-HHHHHHHHHh
Q 023054          143 YTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-VMRFLKFFSF  221 (288)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~  221 (288)
                      .+               .++...|++||+++++|+++++.+++++|  |+||+|+||++.|++ ...+. ...+....+.
T Consensus       186 ~~---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~-~~~~~~~~~~~~~~p~  247 (288)
T 2x9g_A          186 QP---------------CMAFSLYNMGKHALVGLTQSAALELAPYG--IRVNGVAPGVSLLPV-AMGEEEKDKWRRKVPL  247 (288)
T ss_dssp             SC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSCSCCT-TSCHHHHHHHHHTCTT
T ss_pred             CC---------------CCCCchHHHHHHHHHHHHHHHHHHhhccC--eEEEEEEeccccCcc-ccChHHHHHHHhhCCC
Confidence            53               56778999999999999999999999999  999999999999998 42211 1122222345


Q ss_pred             hhc-CChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          222 FLW-KNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       222 ~~~-~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .++ .+|+|+|+.++||++ +...++||++|. ++|.
T Consensus       248 ~r~~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          248 GRREASAEQIADAVIFLVS-GSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             TSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             CCCCCCHHHHHHHHHHHhC-ccccCccCCEEEECcch
Confidence            556 799999999999997 788999999887 5554

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-40  Score=281.77  Aligned_cols=229  Identities=13%  Similarity=0.076  Sum_probs=189.5

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|++|+++|++|++++|+....+ ..+++...+  .++.++.+|++|.++++++++++.+.++++|
T Consensus        18 lITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   94 (271)
T 3ek2_A           18 LLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RITEFAAEF--GSELVFPCDVADDAQIDALFASLKTHWDSLD   94 (271)
T ss_dssp             EECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHHHCSCEE
T ss_pred             EEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH-HHHHHHHHc--CCcEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            699999  99999999999999999999999854433 344454443  3488999999999999999999999999999


Q ss_pred             eEEEccccCCC------CCC-CCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           79 ILINNAGIMFC------PYQ-ISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      +||||||+...      ..+ .+.++|++.+++|+.+++.++++++|+|.+       .++||++||..+..+       
T Consensus        95 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~-------  160 (271)
T 3ek2_A           95 GLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLGAERA-------  160 (271)
T ss_dssp             EEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB-------
T ss_pred             EEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-------CceEEEEeccccccC-------
Confidence            99999998643      223 677899999999999999999999999864       479999999988763       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH----HHHHHHHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM----RFLKFFSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~  227 (288)
                              .++...|++||+|+++|+++++.++++.|  |+||+|+||++.|++........    .+....+..++.+|
T Consensus       161 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p  230 (271)
T 3ek2_A          161 --------IPNYNTMGLAKAALEASVRYLAVSLGAKG--VRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTI  230 (271)
T ss_dssp             --------CTTTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCH
T ss_pred             --------CCCccchhHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCH
Confidence                    66778999999999999999999999999  99999999999999987763322    23334455667899


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +|+|+.++||++ +...++||+.|. ++|+.
T Consensus       231 edva~~i~~l~s-~~~~~~tG~~i~vdgG~~  260 (271)
T 3ek2_A          231 EQVGNAGAFLLS-DLASGVTAEVMHVDSGFN  260 (271)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSEEEEESTTGG
T ss_pred             HHHHHHHHHHcC-cccCCeeeeEEEECCCee
Confidence            999999999997 788999999887 55554

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=4.5e-40  Score=278.25  Aligned_cols=225  Identities=18%  Similarity=0.216  Sum_probs=189.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.+++..        ..++.++.+|++|.++++++++++.+.++++|+|
T Consensus        20 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           20 VITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN--------LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC--------CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh--------cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            69999999999999999999999999999987654321        2468899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .|+||++||..+..+              
T Consensus        92 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-----~g~IV~isS~~~~~~--------------  152 (266)
T 3p19_A           92 VNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-----CGTIINISSIAGKKT--------------  152 (266)
T ss_dssp             EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSC--------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEcChhhCCC--------------
Confidence            999998654  33667789999999999999999999999998865     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---HHHHHH-HHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---VMRFLK-FFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~-~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|++||+++++|+++++.+++++|  |+||+|+||+++|++......   ...... ..+..++.+|+|+|+.+
T Consensus       153 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av  229 (266)
T 3p19_A          153 -FPDHAAYCGTKFAVHAISENVREEVAASN--VRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAV  229 (266)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHH
Confidence             66778999999999999999999999999  999999999999999765421   111111 23666778999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+++ .......+..+. +.+.
T Consensus       230 ~~l~~-~~~~~~~~~i~i~p~~~  251 (266)
T 3p19_A          230 LFAYQ-QPQNVCIREIALAPTKQ  251 (266)
T ss_dssp             HHHHH-SCTTEEEEEEEEEETTC
T ss_pred             HHHHc-CCCCccceeeEEecCCC
Confidence            99998 455555665443 4443

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=6.2e-41  Score=281.83  Aligned_cols=229  Identities=21%  Similarity=0.162  Sum_probs=192.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         9 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            9 IITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998877766554     3468899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+              
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  144 (254)
T 1hdc_A           84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-----GGSIVNISSAAGLMG--------------  144 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEECchhhccC--------------
Confidence            999998653  23567789999999999999999999999998765     589999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcC-ChHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWK-NVPQGAATTC  235 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~-~~~~~a~~~~  235 (288)
                       .++...|++||++++.|+++++.++++.|  |+||+|+||++.|++.....  ....+....+..++. +|+|+|+.++
T Consensus       145 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~  221 (254)
T 1hdc_A          145 -LALTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVV  221 (254)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence             56678999999999999999999999999  99999999999998743210  000011112344566 9999999999


Q ss_pred             HHhcCCCccCCCceeec-cCccC
Q 023054          236 YVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ||++ +...+++|+.|. ++|..
T Consensus       222 ~l~s-~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          222 KLLS-DTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHhC-chhcCCCCCEEEECCCcc
Confidence            9997 778899999887 55543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=6.5e-41  Score=283.37  Aligned_cols=220  Identities=20%  Similarity=0.189  Sum_probs=187.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+..+             ....+.+|++|.++++++++++.+.++++|+|
T Consensus        32 lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l   98 (266)
T 3uxy_A           32 LVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAVAAGLGRLDIV   98 (266)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999865321             22445899999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+              
T Consensus        99 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~--------------  159 (266)
T 3uxy_A           99 VNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-----GGAIVNVASCWGLRP--------------  159 (266)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCSBTTBC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEECCHHhCCC--------------
Confidence            9999987542  3677889999999999999999999999998875     689999999988763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---------HHHHHHHHHhhhcCChHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---------VMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~  229 (288)
                       .++...|++||+|+++|+++++.+++++|  |+||+|+||+++|++......         ...+....+..++.+|+|
T Consensus       160 -~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  236 (266)
T 3uxy_A          160 -GPGHALYCLTKAALASLTQCMGMDHAPQG--IRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPED  236 (266)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHH
T ss_pred             -CCCChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHH
Confidence             66788999999999999999999999999  999999999999998643210         022223345566779999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+.++||++ +.+.++||+.|. ++|.
T Consensus       237 vA~~v~~L~s-~~~~~itG~~i~vdGG~  263 (266)
T 3uxy_A          237 IADVVLFLAS-DAARYLCGSLVEVNGGK  263 (266)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHhC-chhcCCcCCEEEECcCE
Confidence            9999999997 788999999887 5544

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=5.6e-40  Score=279.29  Aligned_cols=234  Identities=17%  Similarity=0.124  Sum_probs=190.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCCh----HHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSI----ASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~~~~~~~~   75 (288)
                      |||||++|||+++|++|+++|++|++++| +.+.++++.+++...+ +.++.++.+|++|.    ++++++++++.+.++
T Consensus        15 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g   93 (276)
T 1mxh_A           15 VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFG   93 (276)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHS
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHHHHHHhcC
Confidence            69999999999999999999999999999 9888888888876653 35789999999999    999999999999899


Q ss_pred             CcceEEEccccCCC--CCCCCC-----------CcchhhhhhhhhHHHHHHHhhHHHHHHhhc-cCCCCCeEEEEcCccc
Q 023054           76 PLNILINNAGIMFC--PYQISE-----------DGIEMQFATNHIGHFLLTNLLLDTMNRTAK-ETGIEGRIVNLSSIAH  141 (288)
Q Consensus        76 ~id~lv~~ag~~~~--~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~vsS~~~  141 (288)
                      ++|+||||||+...  ..+.+.           ++|++.+++|+.++++++++++|+|. ++. ....+++||++||..+
T Consensus        94 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv~isS~~~  172 (276)
T 1mxh_A           94 RCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVVNLCDAMT  172 (276)
T ss_dssp             CCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECCGGG
T ss_pred             CCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEEEECchhh
Confidence            99999999998643  234556           78999999999999999999999987 320 0111289999999988


Q ss_pred             cccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHH
Q 023054          142 QYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFF  219 (288)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~  219 (288)
                      ..+               .++...|++||++++.|+++++.++++.|  |+||+|+||++.|+ . ...  ....+....
T Consensus       173 ~~~---------------~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~-~-~~~~~~~~~~~~~~  233 (276)
T 1mxh_A          173 DLP---------------LPGFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLP-P-AMPQETQEEYRRKV  233 (276)
T ss_dssp             GSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCC-S-SSCHHHHHHHHTTC
T ss_pred             cCC---------------CCCCeehHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCC-c-cCCHHHHHHHHhcC
Confidence            763               56778999999999999999999999999  99999999999999 2 221  111122223


Q ss_pred             Hhhh-cCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          220 SFFL-WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       220 ~~~~-~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +..+ +.+|+|+|+.++||++ +...+++|++|. ++|.
T Consensus       234 p~~r~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          234 PLGQSEASAAQIADAIAFLVS-KDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             TTTSCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             CCCCCCCCHHHHHHHHHHHhC-ccccCccCcEEEECCch
Confidence            4445 7799999999999997 778899999887 5554

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=3.5e-40  Score=277.99  Aligned_cols=228  Identities=18%  Similarity=0.126  Sum_probs=194.1

Q ss_pred             CcccCCChhHHHHHHHHHH---CCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh--cCC
Q 023054            1 MLAGGASGIGLETARVLAL---RKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA--LNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--~~~   75 (288)
                      |||||++|||++++++|++   +|++|++++|+.+.++++.+++...+++.++.++.+|++|.++++++++++.+  .++
T Consensus        10 lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g   89 (259)
T 1oaa_A           10 VLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPE   89 (259)
T ss_dssp             EESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCT
T ss_pred             EEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccccc
Confidence            6999999999999999999   89999999999999998888887765567899999999999999999999988  667


Q ss_pred             Ccc--eEEEccccCCC----CCC-CCCCcchhhhhhhhhHHHHHHHhhHHHHHHh--hccCCCCCeEEEEcCcccccccc
Q 023054           76 PLN--ILINNAGIMFC----PYQ-ISEDGIEMQFATNHIGHFLLTNLLLDTMNRT--AKETGIEGRIVNLSSIAHQYTYK  146 (288)
Q Consensus        76 ~id--~lv~~ag~~~~----~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~~~g~iv~vsS~~~~~~~~  146 (288)
                      ++|  +||||||+...    ..+ .+.++|++.+++|+.+++.++++++|.|.++  .     .|+||++||..+..+  
T Consensus        90 ~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--  162 (259)
T 1oaa_A           90 GLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL-----SKTVVNISSLCALQP--  162 (259)
T ss_dssp             TCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC-----EEEEEEECCGGGTSC--
T ss_pred             cCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-----CceEEEEcCchhcCC--
Confidence            888  99999998643    224 5678999999999999999999999999764  2     489999999988753  


Q ss_pred             CCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------HHHHHHHHH
Q 023054          147 GGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------VVMRFLKFF  219 (288)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~  219 (288)
                                   .++...|++||+++++|+++++.+++  +  |+||+|+||+++|++.....       ....+....
T Consensus       163 -------------~~~~~~Y~asKaa~~~~~~~la~e~~--~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  225 (259)
T 1oaa_A          163 -------------YKGWGLYCAGKAARDMLYQVLAAEEP--S--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK  225 (259)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHCT--T--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred             -------------CCCccHHHHHHHHHHHHHHHHHhhCC--C--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhh
Confidence                         56778999999999999999999996  3  99999999999999865321       112233345


Q ss_pred             HhhhcCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          220 SFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       220 ~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +..++.+|+|+|+.++||++ + ..++||+.+..+
T Consensus       226 p~~~~~~p~dvA~~v~~l~~-~-~~~itG~~i~vd  258 (259)
T 1oaa_A          226 SDGALVDCGTSAQKLLGLLQ-K-DTFQSGAHVDFY  258 (259)
T ss_dssp             HTTCSBCHHHHHHHHHHHHH-H-CCSCTTEEEETT
T ss_pred             hcCCcCCHHHHHHHHHHHHh-h-ccccCCcEEecc
Confidence            66778899999999999997 3 689999988643

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-40  Score=276.53  Aligned_cols=222  Identities=23%  Similarity=0.254  Sum_probs=191.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecC--CChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDL--SSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...+ ..++.++.+|+  ++.++++++++++.+.++++|
T Consensus        18 lITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id   96 (247)
T 3i1j_A           18 LVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARVEHEFGRLD   96 (247)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCS
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHHHHhCCCCC
Confidence            699999999999999999999999999999999999988887764 34567777777  999999999999999999999


Q ss_pred             eEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||+...   ..+.+.++|++.+++|+.+++.++++++|+|.+++     .++||++||..+..+           
T Consensus        97 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~-----------  160 (247)
T 3i1j_A           97 GLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-----DASIAFTSSSVGRKG-----------  160 (247)
T ss_dssp             EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-----SEEEEEECCGGGTSC-----------
T ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CCeEEEEcchhhcCC-----------
Confidence            99999998643   33667889999999999999999999999997754     689999999988763           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcc-cCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQE-EGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~-~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                          .++...|++||+|+++|+++++.+++. .+  |+||+|+||+++|++....      ..........+|+|+|+.+
T Consensus       161 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~--i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~p~dva~~~  228 (247)
T 3i1j_A          161 ----RANWGAYGVSKFATEGLMQTLADELEGVTA--VRANSINPGATRTGMRAQA------YPDENPLNNPAPEDIMPVY  228 (247)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEECCCCSSHHHHHH------STTSCGGGSCCGGGGTHHH
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEecCcccCccchhc------ccccCccCCCCHHHHHHHH
Confidence                667789999999999999999999976 67  9999999999999875321      0011223457899999999


Q ss_pred             HHHhcCCCccCCCceeec
Q 023054          235 CYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~  252 (288)
                      +||++ +++.++||+.|.
T Consensus       229 ~~l~s-~~~~~itG~~i~  245 (247)
T 3i1j_A          229 LYLMG-PDSTGINGQALN  245 (247)
T ss_dssp             HHHHS-GGGTTCCSCEEE
T ss_pred             HHHhC-chhccccCeeec
Confidence            99997 889999999885

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-40  Score=285.36  Aligned_cols=236  Identities=17%  Similarity=0.161  Sum_probs=196.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHhhCCCCceEEEEecCCChH-----------------H
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAA-RNMAAANEARQLILKEDDTARVDTLKLDLSSIA-----------------S   62 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-----------------~   62 (288)
                      |||||++|||+++|+.|+++|++|++++ |+.+.++++.+++.... +.++.++.+|++|.+                 +
T Consensus        50 lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~  128 (328)
T 2qhx_A           50 LVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAPVTLFTR  128 (328)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------CCBCHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhccccccccccccccHHH
Confidence            6999999999999999999999999999 99998888888876333 467999999999999                 9


Q ss_pred             HHHHHHHHHhcCCCcceEEEccccCCC--CCCCC--------------CCcchhhhhhhhhHHHHHHHhhHHHHHHhhc-
Q 023054           63 IKDFAQNFIALNLPLNILINNAGIMFC--PYQIS--------------EDGIEMQFATNHIGHFLLTNLLLDTMNRTAK-  125 (288)
Q Consensus        63 ~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-  125 (288)
                      ++++++++.+.++++|+||||||+...  ..+.+              .++|+..+++|+.+++.++++++|.|.+++. 
T Consensus       129 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~  208 (328)
T 2qhx_A          129 CAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK  208 (328)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGG
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            999999999999999999999998643  23455              6788999999999999999999999986431 


Q ss_pred             cCCCCCeEEEEcCccccccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          126 ETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       126 ~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                      .....++||++||..+..+               .++...|++||++++.|++.++.++++.|  |+||+|+||++.|++
T Consensus       209 ~~~~~g~IV~isS~~~~~~---------------~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~  271 (328)
T 2qhx_A          209 HRGTNYSIINMVDAMTNQP---------------LLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGLSVLVD  271 (328)
T ss_dssp             GSCSCEEEEEECCTTTTSC---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCCC
T ss_pred             CCCCCcEEEEECchhhccC---------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCCc
Confidence            1111479999999987753               56778999999999999999999999999  999999999999999


Q ss_pred             CCCChH-HHHHHHHHHhh-hcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          206 FKHSAV-VMRFLKFFSFF-LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       206 ~~~~~~-~~~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                       ...+. ...+....+.. ++.+|+|+|+.++||++ +...++||++|. ++|+
T Consensus       272 -~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG~  323 (328)
T 2qhx_A          272 -DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGGY  323 (328)
T ss_dssp             -CSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             -cccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-ccccCccCcEEEECCCc
Confidence             44321 11122223444 67899999999999997 788999999887 5554

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-40  Score=281.30  Aligned_cols=227  Identities=19%  Similarity=0.185  Sum_probs=190.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+++.+++..+++     ..++.++.+|++|.++++++++++.+.++++|+|
T Consensus        10 lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A           10 LVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            69999999999999999999999999999998877665544     2568899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|+| ++      .++||++||..+. +              
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~------~g~iv~isS~~~~-~--------------  142 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE------GGSLVLTGSVAGL-G--------------  142 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT------TCEEEEECCCTTC-C--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc------CCEEEEEecchhc-C--------------
Confidence            999998654  2356778899999999999999999999999 43      4799999999865 3              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||++++.|+++++.+++++|  |+||+|+||++.|++......  ...+....+..++.+|+|+|+.++|
T Consensus       143 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~  219 (263)
T 2a4k_A          143 -AFGLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALF  219 (263)
T ss_dssp             -HHHHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             34668899999999999999999999998  999999999999998765421  1112222345567899999999999


Q ss_pred             HhcCCCccCCCceeec-cCccCC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      +++ +...+++|+.+. ++|...
T Consensus       220 l~s-~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          220 LLS-EESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             HHS-GGGTTCCSCEEEESTTTTT
T ss_pred             HhC-ccccCCcCCEEEECCCccc
Confidence            997 778899999887 566543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=9.4e-40  Score=273.59  Aligned_cols=223  Identities=20%  Similarity=0.253  Sum_probs=181.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++++.+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         4 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            4 LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             EETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            69999999999999999999999999999998888777666     3468999999999999999999998889999999


Q ss_pred             EEccccCC---CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+..   +..+.+.++|++.+++|+.+++.++++++|+|.+++     .|+||++||..+..+             
T Consensus        79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~-------------  140 (248)
T 3asu_A           79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-----HGHIINIGSTAGSWP-------------  140 (248)
T ss_dssp             EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSC-------------
T ss_pred             EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CceEEEEccchhccC-------------
Confidence            99999863   234677889999999999999999999999998765     689999999987753             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCccc-CCCCCCC-hHHH-HHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM-TNLFKHS-AVVM-RFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~-t~~~~~~-~~~~-~~~~~~~~~~~~~~~~~a~~~  234 (288)
                        .++...|++||+++++|+++++.++++.|  |+||+|+||++. |++.... .... ............+|+|+|+.+
T Consensus       141 --~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v  216 (248)
T 3asu_A          141 --YAGGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAV  216 (248)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECSBCC----------------------CCBCHHHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHH
Confidence              56678999999999999999999999999  999999999999 9986431 0001 111111222346999999999


Q ss_pred             HHHhcCCCccCCCceeec
Q 023054          235 CYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~  252 (288)
                      +||++  +..+++|+.+.
T Consensus       217 ~~l~s--~~~~~~g~~i~  232 (248)
T 3asu_A          217 WWVST--LPAHVNINTLE  232 (248)
T ss_dssp             HHHHH--SCTTCCCCEEE
T ss_pred             HHHhc--CCccceeeEEE
Confidence            99997  35788998776

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=4.6e-41  Score=287.20  Aligned_cols=223  Identities=17%  Similarity=0.176  Sum_probs=190.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH-------HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA-------AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |||||++|||+++|++|+++|++|++++|+.+       .+++..+++...  +.++.++.+|++|.++++++++++.+.
T Consensus        13 lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   90 (285)
T 3sc4_A           13 FISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVAAAVAKTVEQ   90 (285)
T ss_dssp             EEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999876       456666666655  568999999999999999999999999


Q ss_pred             CCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           74 NLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      ++++|+||||||+...  ..+.+.++|++++++|+.++++++++++|+|.+++     .++||++||..+..+       
T Consensus        91 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~-------  158 (285)
T 3sc4_A           91 FGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-----NPHILTLSPPIRLEP-------  158 (285)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-----SCEEEECCCCCCCSG-------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECChhhccC-------
Confidence            9999999999998754  33678889999999999999999999999998754     689999999987653       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCC-cccCCCCCCChHHHHHHHHHHhhhcCChHHH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPG-LIMTNLFKHSAVVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
                             .+++...|++||+|+++|+++++.+++++|  |+||+|+|| ++.|++....     .....+..++.+|+|+
T Consensus       159 -------~~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~v~PG~~v~t~~~~~~-----~~~~~~~~r~~~pedv  224 (285)
T 3sc4_A          159 -------KWLRPTPYMMAKYGMTLCALGIAEELRDAG--IASNTLWPRTTVATAAVQNL-----LGGDEAMARSRKPEVY  224 (285)
T ss_dssp             -------GGSCSHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECSSCBCCHHHHHH-----HTSCCCCTTCBCTHHH
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeCCCccccHHHHhh-----ccccccccCCCCHHHH
Confidence                   124568899999999999999999999999  999999999 6888764321     1111234566799999


Q ss_pred             HHHHHHHhcCCCccCCCceeecc
Q 023054          231 AATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                      |+.++||++ +.+ ++||+.+..
T Consensus       225 A~~~~~l~s-~~~-~~tG~~i~~  245 (285)
T 3sc4_A          225 ADAAYVVLN-KPS-SYTGNTLLC  245 (285)
T ss_dssp             HHHHHHHHT-SCT-TCCSCEEEH
T ss_pred             HHHHHHHhC-Ccc-cccceEEEE
Confidence            999999997 555 999998863

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=9.7e-41  Score=281.11  Aligned_cols=227  Identities=20%  Similarity=0.166  Sum_probs=183.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+...   +++     +.++.++.+|++|.++++++++.+.+ ++++|+|
T Consensus        13 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~l   83 (257)
T 3tl3_A           13 VVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL-----GDRARFAAADVTDEAAVASALDLAET-MGTLRIV   83 (257)
T ss_dssp             EEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT-----CTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc-----CCceEEEECCCCCHHHHHHHHHHHHH-hCCCCEE
Confidence            69999999999999999999999999999765432   222     46799999999999999999998877 8999999


Q ss_pred             EEccccCCCC------CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhcc---CCCCCeEEEEcCccccccccCCccc
Q 023054           81 INNAGIMFCP------YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKE---TGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        81 v~~ag~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      |||||+....      .+.+.++|++.+++|+.+++.++++++|+|.+....   ....|+||++||..+..+       
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  156 (257)
T 3tl3_A           84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG-------  156 (257)
T ss_dssp             EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC-------
T ss_pred             EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC-------
Confidence            9999986431      236788999999999999999999999999772110   012689999999988753       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HHHHHHHHh-hhcCChH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MRFLKFFSF-FLWKNVP  228 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~-~~~~~~~  228 (288)
                              .++...|++||+|+++|+++++.|++++|  |+||+|+||+++|++.......  .......+. .++.+|+
T Consensus       157 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~  226 (257)
T 3tl3_A          157 --------QIGQAAYSASKGGVVGMTLPIARDLASHR--IRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPD  226 (257)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHH
T ss_pred             --------CCCCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHH
Confidence                    55678999999999999999999999999  9999999999999998765221  122223344 6678999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+.++||++ +  .++||+.|. |+|.
T Consensus       227 dva~~v~~l~s-~--~~itG~~i~vdGG~  252 (257)
T 3tl3_A          227 EYGALAVHIIE-N--PMLNGEVIRLDGAI  252 (257)
T ss_dssp             HHHHHHHHHHH-C--TTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhc-C--CCCCCCEEEECCCc
Confidence            99999999997 3  799999887 5554

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=5.1e-40  Score=280.09  Aligned_cols=229  Identities=14%  Similarity=0.116  Sum_probs=194.9

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|++|+++|++|++++|+.  .++..+++....  .++.++.+|++|.++++++++++.+.++++|
T Consensus        30 lVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id  105 (280)
T 3nrc_A           30 LITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELGKVWDGLD  105 (280)
T ss_dssp             EECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHHHHCSSCC
T ss_pred             EEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            699988  7899999999999999999999987  334455555553  3588999999999999999999999999999


Q ss_pred             eEEEccccCCCC------CC-CCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           79 ILINNAGIMFCP------YQ-ISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        79 ~lv~~ag~~~~~------~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      +||||||+....      .+ .+.++|++.+++|+.+++.++++++|+|.++      .++||++||..+..+       
T Consensus       106 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~-------  172 (280)
T 3nrc_A          106 AIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR------NASMVALTYIGAEKA-------  172 (280)
T ss_dssp             EEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------TCEEEEEECGGGTSC-------
T ss_pred             EEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC------CCeEEEEeccccccC-------
Confidence            999999987531      13 6788999999999999999999999999765      489999999998763       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH----HHHHHHHHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV----MRFLKFFSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~  227 (288)
                              .++...|++||+|++.|+++++.+++++|  |+||+|+||++.|++.......    .......+..+..+|
T Consensus       173 --------~~~~~~Y~asKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p  242 (280)
T 3nrc_A          173 --------MPSYNTMGVAKASLEATVRYTALALGEDG--IKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDI  242 (280)
T ss_dssp             --------CTTTHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCH
T ss_pred             --------CCCchhhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCH
Confidence                    66778999999999999999999999999  9999999999999998765322    223333456667899


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +|+|+.++||++ +...++||+.|. ++|..
T Consensus       243 edvA~~v~~l~s-~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          243 MEVGNTVAFLCS-DMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             HHHHHHHHHTTS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhC-cccCCcCCcEEEECCCcc
Confidence            999999999997 788999999887 66553

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.5e-40  Score=279.32  Aligned_cols=233  Identities=26%  Similarity=0.269  Sum_probs=189.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|+++ .|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        30 lITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  107 (272)
T 4e3z_A           30 LVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG  107 (272)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            699999999999999999999999887 78888888888877665  568999999999999999999999999999999


Q ss_pred             EEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ||||||+...   ..+.+.++|++.+++|+.+++.+++.++|.|.+...  ...++||++||..+..+            
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~------------  173 (272)
T 4e3z_A          108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYS--GQGGAIVNVSSMAAILG------------  173 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCTHHHHC------------
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcc--CCCCEEEEEcchHhccC------------
Confidence            9999998653   235678899999999999999999999999976421  11589999999998764            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---HHHHHHHHHhhhcCChHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---VMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                        ..+....|++||+|++.|+++++.++++.|  |+||+|+||++.|++......   ........+..++.+|+|+|+.
T Consensus       174 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~  249 (272)
T 4e3z_A          174 --SATQYVDYAASKAAIDTFTIGLAREVAAEG--IRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADA  249 (272)
T ss_dssp             --CTTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC------------------CCTTSSCBCHHHHHHH
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHH
Confidence              122457799999999999999999999999  999999999999998764211   1112223355566789999999


Q ss_pred             HHHHhcCCCccCCCceeeccC
Q 023054          234 TCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++||++ +...+++|+.|..+
T Consensus       250 i~~l~s-~~~~~~tG~~i~vd  269 (272)
T 4e3z_A          250 ILYLLS-PSASYVTGSILNVS  269 (272)
T ss_dssp             HHHHHS-GGGTTCCSCEEEES
T ss_pred             HHHHhC-CccccccCCEEeec
Confidence            999997 78899999988743

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=7.3e-40  Score=275.45  Aligned_cols=229  Identities=22%  Similarity=0.207  Sum_probs=191.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+  ++..+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         8 lVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   83 (255)
T 2q2v_A            8 LVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAEREFGGVDIL   83 (255)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999876  4455555443  4578899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+              
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  144 (255)
T 2q2v_A           84 VNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-----WGRIINIASVHGLVG--------------  144 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEcCchhccC--------------
Confidence            999998643  23567789999999999999999999999998764     589999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-HHHH---H----HH-----HHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-VMRF---L----KF-----FSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-~~~~---~----~~-----~~~~~~~  225 (288)
                       .++...|++||++++.|+++++.++++.|  |+||+|+||++.|++...... ....   .    ..     .+..++.
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  221 (255)
T 2q2v_A          145 -STGKAAYVAAKHGVVGLTKVVGLETATSN--VTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFV  221 (255)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCB
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCc
Confidence             56678999999999999999999999998  999999999999998643210 0011   0    11     2344567


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+|+|+.++||++ +...+++|+.|. ++|+
T Consensus       222 ~~~dvA~~~~~l~s-~~~~~~tG~~~~vdgG~  252 (255)
T 2q2v_A          222 TPEHLGELVLFLCS-EAGSQVRGAAWNVDGGW  252 (255)
T ss_dssp             CHHHHHHHHHHHTS-GGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhC-CccCCCCCCEEEECCCc
Confidence            99999999999997 778899999887 5553

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-40  Score=278.45  Aligned_cols=232  Identities=24%  Similarity=0.277  Sum_probs=187.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh-CCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKE-DDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++++.+++... ..+.++.++.+|++|.++++++++++.+.++++|+
T Consensus        10 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   89 (278)
T 1spx_A           10 IITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDI   89 (278)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999999888887777321 12457899999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCC----CCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc-cccccCCcccc
Q 023054           80 LINNAGIMFCP--YQI----SEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH-QYTYKGGIRFQ  152 (288)
Q Consensus        80 lv~~ag~~~~~--~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~~~~~  152 (288)
                      ||||||+....  .+.    +.++|++.+++|+.+++.++++++|.|.++      +++||++||..+ ..         
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~---------  154 (278)
T 1spx_A           90 LVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLH---------  154 (278)
T ss_dssp             EEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSS---------
T ss_pred             EEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEeccccccc---------
Confidence            99999986432  244    778899999999999999999999999765      479999999987 54         


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----H------HHHHHHHHHh
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----V------VMRFLKFFSF  221 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----~------~~~~~~~~~~  221 (288)
                            +.++...|++||++++.|+++++.++++.|  |+||+|+||++.|++.....     .      ........+.
T Consensus       155 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  226 (278)
T 1spx_A          155 ------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA  226 (278)
T ss_dssp             ------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC--------------HHHHHHHHHHCTT
T ss_pred             ------CCCCccHHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC
Confidence                  255678899999999999999999999999  99999999999999865321     0      1112222344


Q ss_pred             hhcCChHHHHHHHHHHhcCCCccC-CCceeec-cCcc
Q 023054          222 FLWKNVPQGAATTCYVALHPNLKG-VTGKYFL-DCNE  256 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~~~~-~tG~~~~-~~~~  256 (288)
                      .++.+|+|+|+.++||++ +...+ ++|+.|. ++|.
T Consensus       227 ~~~~~~~dvA~~v~~l~s-~~~~~~~tG~~~~vdgG~  262 (278)
T 1spx_A          227 GVMGQPQDIAEVIAFLAD-RKTSSYIIGHQLVVDGGS  262 (278)
T ss_dssp             SSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTG
T ss_pred             cCCCCHHHHHHHHHHHcC-ccccCcccCcEEEECCCc
Confidence            567799999999999997 55666 9999887 5554

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=4.1e-40  Score=276.87  Aligned_cols=228  Identities=24%  Similarity=0.274  Sum_probs=194.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-----
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-----   74 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-----   74 (288)
                      |||||++|||+++|++|+++|++|+++ .|+.+.+++..+++...  +.++.++.+|++|.++++.+++++.+.+     
T Consensus        11 lITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   88 (255)
T 3icc_A           11 LVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNELQNRTG   88 (255)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence            699999999999999999999999885 77888888888888765  5678999999999999999999887764     


Q ss_pred             -CCcceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           75 -LPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        75 -~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                       +++|+||||||+....  .+.+.++|++.+++|+.+++.+++.++|.|.+       .++||++||..+..+       
T Consensus        89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~-------  154 (255)
T 3icc_A           89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRIS-------  154 (255)
T ss_dssp             SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGTSC-------
T ss_pred             CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-------CCEEEEeCChhhccC-------
Confidence             3599999999986542  35677889999999999999999999999843       479999999998763       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH----HHHHHHHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM----RFLKFFSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~  227 (288)
                              .+....|++||+|++.|+++++.+++++|  |+||+|+||++.|++........    ......+..++.+|
T Consensus       155 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
T 3icc_A          155 --------LPDFIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEV  224 (255)
T ss_dssp             --------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCH
T ss_pred             --------CCCcchhHHhHHHHHHHHHHHHHHHHhcC--eEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCH
Confidence                    66778999999999999999999999999  99999999999999987652211    12222345667799


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|+|+.++||++ +...++||+.|. ++|
T Consensus       225 ~dva~~~~~l~s-~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          225 EDIADTAAFLAS-PDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESSS
T ss_pred             HHHHHHHHHHhC-cccCCccCCEEEecCC
Confidence            999999999997 788999999988 444

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-40  Score=278.12  Aligned_cols=227  Identities=23%  Similarity=0.226  Sum_probs=192.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++++.+++     +.++.++.+|++|.++++++++.+.+.++++|+|
T Consensus        10 lVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A           10 LVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888777666     3578999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.++      +++||++||..+..+              
T Consensus        85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~--------------  144 (253)
T 1hxh_A           85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET------GGSIINMASVSSWLP--------------  144 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc------CCEEEEEcchhhcCC--------------
Confidence            999998643  2356778999999999999999999999999764      379999999988753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhccc--CCceEEEEeeCCcccCCCCCCC---hHHHH-HHH---HHHhhhcCChHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEE--GVNITANSVHPGLIMTNLFKHS---AVVMR-FLK---FFSFFLWKNVPQ  229 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~--~~~i~v~~v~PG~v~t~~~~~~---~~~~~-~~~---~~~~~~~~~~~~  229 (288)
                       .++...|++||++++.|+++++.+++++  |  |+||+|+||++.|++....   ..... +..   ..+..++.+|+|
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  221 (253)
T 1hxh_A          145 -IEQYAGYSASKAAVSALTRAAALSCRKQGYA--IRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPER  221 (253)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHH
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHhhhcCCC--eEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHH
Confidence             5677899999999999999999999998  7  9999999999999875421   01111 111   223445679999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+.++||++ +...+++|+.|. ++|+
T Consensus       222 vA~~~~~l~s-~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          222 IAQLVLFLAS-DESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHcC-ccccCCCCcEEEECCCc
Confidence            9999999997 778899999887 5554

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-40  Score=275.57  Aligned_cols=225  Identities=20%  Similarity=0.224  Sum_probs=188.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+. ++..+++.      + .++.+|++|.++++++++++.+.++++|+|
T Consensus        10 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~------~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A           10 LVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG------G-AFFQVDLEDERERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT------C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh------C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999877 65555541      4 788999999999999999999989999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .++||++||..+..+              
T Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~--------------  142 (256)
T 2d1y_A           82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-----GGAIVNVASVQGLFA--------------  142 (256)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-----CEEEEEECCGGGTSB--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEccccccCC--------------
Confidence            999998654  23567788999999999999999999999998764     589999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hHHHHHHHHHHhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AVVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  230 (288)
                       .++...|++||++++.|+++++.++++.+  |+||+|+||++.|++....        .....+....+..++.+|+|+
T Consensus       143 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  219 (256)
T 2d1y_A          143 -EQENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEV  219 (256)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHH
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence             56778999999999999999999999999  9999999999999875321        000111112244556799999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+.++||++ +...+++|+.|. ++|.
T Consensus       220 A~~~~~l~s-~~~~~~~G~~~~v~gG~  245 (256)
T 2d1y_A          220 AEAVLFLAS-EKASFITGAILPVDGGM  245 (256)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhC-chhcCCCCCEEEECCCc
Confidence            999999997 678899999877 5554

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=8e-40  Score=279.29  Aligned_cols=229  Identities=23%  Similarity=0.286  Sum_probs=190.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+.+. .+++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        33 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~  110 (283)
T 1g0o_A           33 LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI  110 (283)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999998754 45555666554  467899999999999999999999998999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.++++++++++|+|..       .++||++||..+..+             
T Consensus       111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~-------------  170 (283)
T 1g0o_A          111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGSITGQAK-------------  170 (283)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-------TCEEEEECCGGGTCS-------------
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-------CCeEEEEechhhccC-------------
Confidence            9999998654  235678899999999999999999999999922       589999999987653             


Q ss_pred             CCCC-ccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------------hHHHHHHH--HHHh
Q 023054          158 AGYS-DKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------------AVVMRFLK--FFSF  221 (288)
Q Consensus       158 ~~~~-~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~--~~~~  221 (288)
                        .+ +...|++||+++++|+++++.++++.|  |+||+|+||++.|++....             .....+..  ..+.
T Consensus       171 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  246 (283)
T 1g0o_A          171 --AVPKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL  246 (283)
T ss_dssp             --SCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCC
Confidence              22 367899999999999999999999999  9999999999999975421             01111222  2344


Q ss_pred             hhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          222 FLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .++.+|+|+|+.++||++ +...++||+.|. ++|.
T Consensus       247 ~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          247 RRVGLPIDIARVVCFLAS-NDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhC-ccccCcCCCEEEeCCCc
Confidence            566799999999999997 778899999887 5553

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3e-39  Score=272.38  Aligned_cols=225  Identities=21%  Similarity=0.241  Sum_probs=191.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++.     .++.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A           11 LVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999988877666553     248889999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++++++.++|.|.+++     .++||++||..+..+              
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  146 (260)
T 1nff_A           86 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-----RGSIINISSIEGLAG--------------  146 (260)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEEeehhhcCC--------------
Confidence            999998653  23567789999999999999999999999998765     589999999988753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|++||++++.+++.++.++++.|  |+||+|+||++.|++.. ... ..+. ..+..++.+|+|+|+.++|++
T Consensus       147 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~-~~~-~~~~-~~~~~~~~~~~dvA~~v~~l~  220 (260)
T 1nff_A          147 -TVACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTD-WVP-EDIF-QTALGRAAEPVEVSNLVVYLA  220 (260)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGT-TSC-TTCS-CCSSSSCBCHHHHHHHHHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCCCCccc-cch-hhHH-hCccCCCCCHHHHHHHHHHHh
Confidence             55678999999999999999999999999  99999999999999854 100 0000 123345678999999999999


Q ss_pred             cCCCccCCCceeec-cCcc
Q 023054          239 LHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       239 ~~~~~~~~tG~~~~-~~~~  256 (288)
                      + +...+++|+.+. ++|.
T Consensus       221 s-~~~~~~~G~~~~v~gG~  238 (260)
T 1nff_A          221 S-DESSYSTGAEFVVDGGT  238 (260)
T ss_dssp             S-GGGTTCCSCEEEESTTG
T ss_pred             C-ccccCCcCCEEEECCCe
Confidence            7 778899999877 5554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.4e-40  Score=288.41  Aligned_cols=224  Identities=19%  Similarity=0.200  Sum_probs=190.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-------HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-------ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.       +++..+++...  +.++.++.+|++|+++++++++++.+.
T Consensus        49 lVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~~  126 (346)
T 3kvo_A           49 FITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQISAAVEKAIKK  126 (346)
T ss_dssp             EEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             EEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            699999999999999999999999999998764       45566666554  568999999999999999999999999


Q ss_pred             CCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           74 NLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      ++++|+||||||+...  ..+.+.++|++++++|+.++++++++++|+|++++     .++||++||..+..+.      
T Consensus       127 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-----~g~IV~iSS~~~~~~~------  195 (346)
T 3kvo_A          127 FGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-----VAHILNISPPLNLNPV------  195 (346)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-----SCEEEEECCCCCCCGG------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-----CCEEEEECCHHHcCCC------
Confidence            9999999999998654  34677789999999999999999999999998765     6899999999876420      


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCc-ccCCCCCCChHHHHHHHHHHhhhcCChHHH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGL-IMTNLFKHSAVVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
                             ..++...|++||++++.|++.++.|++ .+  |+||+|+||+ ++|++....      ....+..+..+|+|+
T Consensus       196 -------~~~~~~~Y~aSKaal~~l~~~la~e~~-~g--Irvn~v~PG~~i~T~~~~~~------~~~~~~~r~~~pedv  259 (346)
T 3kvo_A          196 -------WFKQHCAYTIAKYGMSMYVLGMAEEFK-GE--IAVNALWPKTAIHTAAMDML------GGPGIESQCRKVDII  259 (346)
T ss_dssp             -------GTSSSHHHHHHHHHHHHHHHHHHHHTT-TT--CEEEEEECSBCBCCHHHHHH------CC--CGGGCBCTHHH
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhc-CC--cEEEEEeCCCccccHHHHhh------ccccccccCCCHHHH
Confidence                   145678899999999999999999999 88  9999999995 888764321      112345667899999


Q ss_pred             HHHHHHHhcCCCccCCCceeeccCc
Q 023054          231 AATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      |+.++||++ + +.++||++|.|++
T Consensus       260 A~~v~~L~s-~-~~~itG~~ivdgg  282 (346)
T 3kvo_A          260 ADAAYSIFQ-K-PKSFTGNFVIDEN  282 (346)
T ss_dssp             HHHHHHHHT-S-CTTCCSCEEEHHH
T ss_pred             HHHHHHHHh-c-CCCCCceEEECCc
Confidence            999999997 5 8999999987666

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.4e-39  Score=269.06  Aligned_cols=222  Identities=17%  Similarity=0.191  Sum_probs=189.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         6 lITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (235)
T 3l77_A            6 VITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVV   84 (235)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEE
Confidence            699999999999999999999999999999999998888886443 5679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|+|.+.      .+++|+++|..+..+              
T Consensus        85 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~~--------------  144 (235)
T 3l77_A           85 VANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT------GGLALVTTSDVSARL--------------  144 (235)
T ss_dssp             EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSC--------------
T ss_pred             EECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------CCcEEEEecchhccc--------------
Confidence            999998754  2366888999999999999999999999999544      589999999887753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .+....|++||+++++|++++  ++...+  |+||+|+||+++|++.......      ....++.+|+|+|+.++||+
T Consensus       145 -~~~~~~Y~~sKaa~~~~~~~l--~~~~~~--i~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~p~dva~~v~~l~  213 (235)
T 3l77_A          145 -IPYGGGYVSTKWAARALVRTF--QIENPD--VRFFELRPGAVDTYFGGSKPGK------PKEKGYLKPDEIAEAVRCLL  213 (235)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHH--HHHCTT--SEEEEEEECSBSSSTTTCCSCC------CGGGTCBCHHHHHHHHHHHH
T ss_pred             -CCCcchHHHHHHHHHHHHHHH--hhcCCC--eEEEEEeCCccccccccccCCc------ccccCCCCHHHHHHHHHHHH
Confidence             556688999999999999999  444566  9999999999999997754211      11225679999999999999


Q ss_pred             cCCCccCCCceeeccCc
Q 023054          239 LHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       239 ~~~~~~~~tG~~~~~~~  255 (288)
                      + +...+++|+.+..++
T Consensus       214 ~-~~~~~~~~~~~~~~~  229 (235)
T 3l77_A          214 K-LPKDVRVEELMLRSV  229 (235)
T ss_dssp             T-SCTTCCCCEEEECCT
T ss_pred             c-CCCCCccceEEEeec
Confidence            7 778889999776443

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=8e-40  Score=274.70  Aligned_cols=220  Identities=25%  Similarity=0.301  Sum_probs=181.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+             ..+.++.+|++|.++++++++++.+.++++|+|
T Consensus        25 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           25 LVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999986432             227889999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.+++     .++||++||..+..+              
T Consensus        92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~--------------  152 (253)
T 2nm0_A           92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-----KGRVVLISSVVGLLG--------------  152 (253)
T ss_dssp             EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-----CEEEEEECCCCCCCC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCEEEEECchhhCCC--------------
Confidence            999998654  23667889999999999999999999999998765     689999999987652              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||++++.|++.++.+++..+  |+||+|+||+++|++......  ...+....+..++.+|+|+|+.++|
T Consensus       153 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~  229 (253)
T 2nm0_A          153 -SAGQANYAASKAGLVGFARSLARELGSRN--ITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRF  229 (253)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHCSSS--EEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             45678899999999999999999999998  999999999999998754311  1112222344567799999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |++ +...+++|+.|. ++|.
T Consensus       230 l~s-~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          230 LAS-DDASYITGAVIPVDGGL  249 (253)
T ss_dssp             HHS-GGGTTCCSCEEEESTTT
T ss_pred             HhC-ccccCCcCcEEEECCcc
Confidence            997 778899999887 5553

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.7e-39  Score=274.48  Aligned_cols=229  Identities=22%  Similarity=0.275  Sum_probs=190.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++.     .++.++.+|++|.++++++++++.+.++++|+|
T Consensus        16 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           16 IVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT-----TCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----cCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999887776555432     267889999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.+++.    .++||++||..+..+              
T Consensus        91 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~--------------  152 (263)
T 3ak4_A           91 CANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNT----KGVIVNTASLAAKVG--------------  152 (263)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC----CCEEEEECCGGGTSC--------------
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CeEEEEecccccccC--------------
Confidence            999998643  235677899999999999999999999999987531    379999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----H-----HH----HHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----V-----MR----FLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~-----~~----~~~~~~~~~~~  225 (288)
                       .++...|++||++++.|+++++.++++.|  |+||+|+||++.|++......    .     ..    +....+..++.
T Consensus       153 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  229 (263)
T 3ak4_A          153 -APLLAHYSASKFAVFGWTQALAREMAPKN--IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIE  229 (263)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCB
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHhHcC--eEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCc
Confidence             55678999999999999999999999999  999999999999998543210    0     11    11122445677


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+|+|+.++||++ +...+++|+.|. ++|+
T Consensus       230 ~~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~  260 (263)
T 3ak4_A          230 EPEDVADVVVFLAS-DAARFMTGQGINVTGGV  260 (263)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESSSS
T ss_pred             CHHHHHHHHHHHhC-ccccCCCCCEEEECcCE
Confidence            99999999999997 778899999877 5553

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.5e-40  Score=275.39  Aligned_cols=222  Identities=18%  Similarity=0.253  Sum_probs=188.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+...           ..++.++.+|++|+++++++++++.+.++++|+|
T Consensus        32 lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  100 (260)
T 3un1_A           32 VITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIERFGRIDSL  100 (260)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            69999999999999999999999999999864321           3468999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.++++++++++|.|.+++     .++||++||..+..+             .
T Consensus       101 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~-------------~  162 (260)
T 3un1_A          101 VNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-----SGHIVSITTSLVDQP-------------M  162 (260)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCTTTTSC-------------B
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEEechhhccC-------------C
Confidence            9999987542  3677889999999999999999999999998865     689999999876532             0


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                      +..+...|++||+|++.|+++++.+++++|  |+||+|+||++.|++.... .........+..++.+|+|+|+.++||.
T Consensus       163 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~-~~~~~~~~~p~~r~~~~~dva~av~~L~  239 (260)
T 3un1_A          163 VGMPSALASLTKGGLNAVTRSLAMEFSRSG--VRVNAVSPGVIKTPMHPAE-THSTLAGLHPVGRMGEIRDVVDAVLYLE  239 (260)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECCBCCTTSCGG-GHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEEeecCCCCCCCCHH-HHHHHhccCCCCCCcCHHHHHHHHHHhc
Confidence            234557899999999999999999999999  9999999999999997653 2333444456777889999999999993


Q ss_pred             cCCCccCCCceeec-cCccC
Q 023054          239 LHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       239 ~~~~~~~~tG~~~~-~~~~~  257 (288)
                         ...++||+.|. |+|..
T Consensus       240 ---~~~~itG~~i~vdGG~~  256 (260)
T 3un1_A          240 ---HAGFITGEILHVDGGQN  256 (260)
T ss_dssp             ---HCTTCCSCEEEESTTGG
T ss_pred             ---ccCCCCCcEEEECCCee
Confidence               56899999887 55543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.2e-39  Score=272.36  Aligned_cols=223  Identities=11%  Similarity=0.106  Sum_probs=185.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-e--CChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-A--RNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||++|||+++++.|+++|++|+++ +  |+.+.++++.+++  .  +       +|+.|.++++++++++.+.++++
T Consensus         5 lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~--~-------~~~~~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            5 LVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--P--G-------TIALAEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             EESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--T--T-------EEECCCCCGGGHHHHHGGGSSCE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--C--C-------CcccCHHHHHHHHHHHHHHcCCC
Confidence            699999999999999999999999999 6  9998877766554  1  1       23347788888999999999999


Q ss_pred             ceEEEccccCCC-----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           78 NILINNAGIMFC-----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        78 d~lv~~ag~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      |+||||||+...     ..+.+.++|++.+++|+.+++.++++++|+|.+++     .|+||++||..+..+        
T Consensus        74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~--------  140 (244)
T 1zmo_A           74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-----GASVIFITSSVGKKP--------  140 (244)
T ss_dssp             EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTSC--------
T ss_pred             CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECChhhCCC--------
Confidence            999999998643     23667789999999999999999999999998765     689999999988763        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCC---CCCh---HHHHHHH-HHHhhhcC
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLF---KHSA---VVMRFLK-FFSFFLWK  225 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~---~~~~---~~~~~~~-~~~~~~~~  225 (288)
                             .++...|++||+++++|+++++.+++++|  |+||+|+||+++|++.   ....   ....+.. ..+..++.
T Consensus       141 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  211 (244)
T 1zmo_A          141 -------LAYNPLYGPARAATVALVESAAKTLSRDG--ILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLG  211 (244)
T ss_dssp             -------CTTCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCB
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCc
Confidence                   56678999999999999999999999999  9999999999999997   4321   1112222 34555677


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +|+|+|+.++||++ +...++||++|. |+|+.
T Consensus       212 ~pe~vA~~v~~l~s-~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          212 RPDEMGALITFLAS-RRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             CHHHHHHHHHHHHT-TTTGGGTTCEEEESTTCC
T ss_pred             CHHHHHHHHHHHcC-ccccCccCCEEEeCCCCC
Confidence            99999999999997 788999999887 55543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=5.2e-39  Score=269.47  Aligned_cols=221  Identities=24%  Similarity=0.239  Sum_probs=175.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.         ..   ..+.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~l   78 (250)
T 2fwm_X           11 WVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQ---YPFATEVMDVADAAQVAQVCQRLLAETERLDAL   78 (250)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SC---CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hc---CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999998651         11   127889999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|+|.+++     .++||++||..+..+              
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~--------------  139 (250)
T 2fwm_X           79 VNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-----GGAIVTVASDAAHTP--------------  139 (250)
T ss_dssp             EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSC--------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-----CCEEEEECchhhCCC--------------
Confidence            999998643  33567789999999999999999999999998765     689999999988753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HH-HHHH-------HHHhhhcCC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VM-RFLK-------FFSFFLWKN  226 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~-~~~~-------~~~~~~~~~  226 (288)
                       .++...|++||++++.|+++++.++++.|  |+||+|+||++.|++......    .. .+..       ..+..++.+
T Consensus       140 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  216 (250)
T 2fwm_X          140 -RIGMSAYGASKAALKSLALSVGLELAGSG--VRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIAR  216 (250)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC------------------------------------C
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhCccC--CEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcC
Confidence             56778999999999999999999999999  999999999999998654210    11 1212       345556789


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+|+.++||++ +...+++|+.|. ++|.
T Consensus       217 p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~  246 (250)
T 2fwm_X          217 PQEIANTILFLAS-DLASHITLQDIVVDGGS  246 (250)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHhC-ccccCCCCCEEEECCCc
Confidence            9999999999997 778899999887 5554

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-39  Score=274.53  Aligned_cols=226  Identities=21%  Similarity=0.261  Sum_probs=189.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+++.++++.+++      .++.++.+|++|.++++++++++.+.++++|+|
T Consensus        13 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A           13 VVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998877665543      237889999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.++++++++++|+|.++      .++||++||..+..+             
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~-------------  147 (270)
T 1yde_A           87 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAIG-------------  147 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHHC-------------
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------CCEEEEEcCccccCC-------------
Confidence            999998642   2356778899999999999999999999999764      489999999987763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-----hHHHHH---HHHHHhhhcCChHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-----AVVMRF---LKFFSFFLWKNVPQ  229 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-----~~~~~~---~~~~~~~~~~~~~~  229 (288)
                        .+....|++||++++.|+++++.+++++|  |+||+|+||++.|++....     ......   ....+..++.+|+|
T Consensus       148 --~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  223 (270)
T 1yde_A          148 --QAQAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAE  223 (270)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHH
T ss_pred             --CCCCcccHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHH
Confidence              55678899999999999999999999999  9999999999999975321     111111   12234556789999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +|+.++||++ + +.++||+.|. |+|..
T Consensus       224 va~~v~~L~s-~-~~~itG~~i~vdGG~~  250 (270)
T 1yde_A          224 VGAAAVFLAS-E-ANFCTGIELLVTGGAE  250 (270)
T ss_dssp             HHHHHHHHHH-H-CTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHcc-c-CCCcCCCEEEECCCee
Confidence            9999999998 5 7899999776 56543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.3e-39  Score=269.79  Aligned_cols=224  Identities=21%  Similarity=0.220  Sum_probs=186.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.   ..+++     +  +.++.+|++| ++++++++++.+.++++|+|
T Consensus         6 lVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            6 LVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-----G--AVPLPTDLEK-DDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-----T--CEEEECCTTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-----C--cEEEecCCch-HHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999865   22333     2  7788999999 99999999999888999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+.             
T Consensus        75 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~-------------  136 (239)
T 2ekp_A           75 VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-----WGRVLFIGSVTTFTAG-------------  136 (239)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSCC-------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECchhhccCC-------------
Confidence            999998643  33667789999999999999999999999998765     5899999999876531             


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                      ..++...|++||++++.|+++++.+++++|  |+||+|+||++.|++.....    ....+....+..++.+|+|+|+.+
T Consensus       137 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  214 (239)
T 2ekp_A          137 GPVPIPAYTTAKTALLGLTRALAKEWARLG--IRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVA  214 (239)
T ss_dssp             TTSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            015678999999999999999999999999  99999999999999865321    111111223445667999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +...+++|+.+. ++|+
T Consensus       215 ~~l~s-~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          215 AVLCG-DEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHHTS-GGGTTCCSCEEEESTTT
T ss_pred             HHHcC-chhcCCCCCEEEECCCc
Confidence            99997 778899999887 5554

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=4.9e-39  Score=274.18  Aligned_cols=230  Identities=18%  Similarity=0.217  Sum_probs=191.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++     +.++.++.+|++|.++++++++++ +.++++|+|
T Consensus        34 lVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~l  107 (281)
T 3ppi_A           34 IVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRYA  107 (281)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCeE
Confidence            69999999999999999999999999999999988888777     467999999999999999999999 778899999


Q ss_pred             EEc-cccCCCC-------CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC-CCCCeEEEEcCccccccccCCccc
Q 023054           81 INN-AGIMFCP-------YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET-GIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        81 v~~-ag~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      ||| ||+....       .+.+.++|++.+++|+.+++++++.++|.|.+..... +..|+||++||..+..+       
T Consensus       108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  180 (281)
T 3ppi_A          108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG-------  180 (281)
T ss_dssp             EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC-------
T ss_pred             EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC-------
Confidence            999 5554321       2456677999999999999999999999998632111 12689999999998763       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHh-hhcCChH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSF-FLWKNVP  228 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~-~~~~~~~  228 (288)
                              .++...|++||+|+++|+++++.+++..|  |+||+|+||++.|++......  ...+....+. .++.+|+
T Consensus       181 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pe  250 (281)
T 3ppi_A          181 --------QIGQTAYAAAKAGVIGLTIAAARDLSSAG--IRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPD  250 (281)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHH
T ss_pred             --------CCCCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHH
Confidence                    66778999999999999999999999999  999999999999998765422  1222222333 5567999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+.++||++ +  .+++|+.|. ++|.
T Consensus       251 dvA~~v~~l~s-~--~~~tG~~i~vdGG~  276 (281)
T 3ppi_A          251 EFADAAAFLLT-N--GYINGEVMRLDGAQ  276 (281)
T ss_dssp             HHHHHHHHHHH-C--SSCCSCEEEESTTC
T ss_pred             HHHHHHHHHHc-C--CCcCCcEEEECCCc
Confidence            99999999997 3  689999887 4444

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.2e-39  Score=275.67  Aligned_cols=229  Identities=12%  Similarity=0.115  Sum_probs=189.8

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||+++|++|+++|++|++++|+. ..++..+++....+  ...++.+|++|.++++++++++.+.++++|
T Consensus        13 lVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   89 (265)
T 1qsg_A           13 LVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGKVWPKFD   89 (265)
T ss_dssp             EECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred             EEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            699999  9999999999999999999999987 44444555554432  347889999999999999999999999999


Q ss_pred             eEEEccccCCC------CCC-CCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           79 ILINNAGIMFC------PYQ-ISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      +||||||+...      ..+ .+.++|++.+++|+.++++++++++|+|.+       .|+||++||..+..+       
T Consensus        90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~-------  155 (265)
T 1qsg_A           90 GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERA-------  155 (265)
T ss_dssp             EEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB-------
T ss_pred             EEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEcchhhccC-------
Confidence            99999998642      124 677899999999999999999999999853       479999999887653       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHH----HHHHHHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR----FLKFFSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~  227 (288)
                              .++...|++||++++.|+++++.+++++|  |+||+|+||++.|++.........    +....+..++.+|
T Consensus       156 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~  225 (265)
T 1qsg_A          156 --------IPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI  225 (265)
T ss_dssp             --------CTTTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCH
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCH
Confidence                    55667899999999999999999999998  999999999999998764321111    2222345567899


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +|+|+.++||++ +...+++|+.|. ++|..
T Consensus       226 ~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~  255 (265)
T 1qsg_A          226 EDVGNSAAFLCS-DLSAGISGEVVHVDGGFS  255 (265)
T ss_dssp             HHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhC-chhcCccCCEEEECCCcC
Confidence            999999999997 778899999876 55543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.4e-39  Score=274.69  Aligned_cols=228  Identities=12%  Similarity=0.087  Sum_probs=190.1

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+  +|||++++++|+++|++|++++|+.+ .++..+++....  ..+.++.+|++|.++++++++++.+.++++|
T Consensus        12 lVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   88 (261)
T 2wyu_A           12 LVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL--GGALLFRADVTQDEELDALFAGVKEAFGGLD   88 (261)
T ss_dssp             EEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             EEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            699999  99999999999999999999999975 444445554443  2378899999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+...      ..+.+.++|++.+++|+.++++++++++|.|.+       +|+||++||..+..+        
T Consensus        89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~--------  153 (261)
T 2wyu_A           89 YLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEKV--------  153 (261)
T ss_dssp             EEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTSB--------
T ss_pred             EEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc-------CCEEEEEecccccCC--------
Confidence            99999998642      335678899999999999999999999998853       479999999887653        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH----HHHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV----MRFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~  228 (288)
                             .++...|++||++++.|++.++.+++++|  |+||+|+||++.|++.......    ..+....+..++.+|+
T Consensus       154 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  224 (261)
T 2wyu_A          154 -------VPKYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE  224 (261)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHH
Confidence                   55667899999999999999999999999  9999999999999986543211    1222334556678999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+.++||++ +...++||+.|. ++|+
T Consensus       225 dva~~v~~l~s-~~~~~~tG~~~~vdgG~  252 (261)
T 2wyu_A          225 EVGNLGLFLLS-PLASGITGEVVYVDAGY  252 (261)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHcC-hhhcCCCCCEEEECCCc
Confidence            99999999997 778899999877 5554

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=3.8e-40  Score=279.32  Aligned_cols=225  Identities=17%  Similarity=0.136  Sum_probs=185.6

Q ss_pred             CcccC--CChhHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC--
Q 023054            1 MLAGG--ASGIGLETARVLALRKAHVIIAARNMAAA-NEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL--   75 (288)
Q Consensus         1 lItGa--s~gIG~~ia~~La~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--   75 (288)
                      |||||  ++|||+++|++|+++|++|++++|+.+.. +++.+++     +.++.++.+|++|.++++++++++.+.++  
T Consensus        11 lVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A           11 LVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-----PAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             EECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-----SSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             EEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-----CCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            69999  99999999999999999999999987652 3333222     34688999999999999999999999888  


Q ss_pred             -CcceEEEccccCC-------CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC
Q 023054           76 -PLNILINNAGIMF-------CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG  147 (288)
Q Consensus        76 -~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  147 (288)
                       ++|+||||||+..       +..+.+.++|++.+++|+.+++.++++++|+|.+       .|+||++||..+ .    
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~iss~~~-~----  153 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-------GGSIVGMDFDPS-R----  153 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECCCS-S----
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCeEEEEcCccc-c----
Confidence             9999999999865       2235677899999999999999999999999854       379999999764 2    


Q ss_pred             CccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC------hH--------HH
Q 023054          148 GIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS------AV--------VM  213 (288)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~------~~--------~~  213 (288)
                                 +.+....|++||++++.|+++++.+++++|  |+||+|+||+++|++....      ..        ..
T Consensus       154 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  220 (269)
T 2h7i_A          154 -----------AMPAYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEE  220 (269)
T ss_dssp             -----------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred             -----------ccCchHHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccchhhhccccccchhhHHHHHHHHHH
Confidence                       255678899999999999999999999998  9999999999999975421      10        01


Q ss_pred             HHHHHHHhh-hcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          214 RFLKFFSFF-LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       214 ~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .+....|.. ++.+|+|+|+.++||++ +.+.++||+.|. |+|+
T Consensus       221 ~~~~~~p~~rr~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          221 GWDQRAPIGWNMKDATPVAKTVCALLS-DWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHHHHCTTCCCTTCCHHHHHHHHHHHS-SSCTTCCSEEEEESTTG
T ss_pred             hhhccCCcccCCCCHHHHHHHHHHHhC-chhccCcceEEEecCCe
Confidence            112223444 47899999999999997 889999999887 5554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=8.1e-39  Score=268.08  Aligned_cols=232  Identities=22%  Similarity=0.242  Sum_probs=194.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|+++++++++++.+.++++|+|
T Consensus         6 lItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (250)
T 2cfc_A            6 IVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFGAIDVL   84 (250)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            699999999999999999999999999999988888777762222 3578999999999999999999999988999999


Q ss_pred             EEccccCCC-----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           81 INNAGIMFC-----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        81 v~~ag~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |||||+...     ..+.+.+++++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+           
T Consensus        85 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~-----------  148 (250)
T 2cfc_A           85 VNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-----AGVIVNIASVASLVA-----------  148 (250)
T ss_dssp             EECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-----------
T ss_pred             EECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CCEEEEECChhhccC-----------
Confidence            999998643     22456788999999999999999999999998765     589999999987653           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-h---HHHHHHHHHHhhhcCChHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-A---VVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~~~~~~~~~~~a  231 (288)
                          .++...|++||++++.+++.++.+++.++  |+||+|+||++.|++.... .   ....+....+..++.+|+|+|
T Consensus       149 ----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  222 (250)
T 2cfc_A          149 ----FPGRSAYTTSKGAVLQLTKSVAVDYAGSG--IRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVA  222 (250)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHH
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence                55678999999999999999999999988  9999999999999986531 1   111111222445567999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCcc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.++++++ +...+++|+.|. ++|+
T Consensus       223 ~~~~~l~~-~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          223 DAVMFLAG-EDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHHS-TTCTTCCSCEEEESTTG
T ss_pred             HHHHHHcC-chhhcccCCEEEECCce
Confidence            99999997 678899999887 5543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.1e-39  Score=270.16  Aligned_cols=219  Identities=14%  Similarity=0.146  Sum_probs=179.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++     +.++.++.+|+++.++++++++++.+.   .|+|
T Consensus         5 lVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~l   76 (230)
T 3guy_A            5 VITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSI---PSTV   76 (230)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSC---CSEE
T ss_pred             EEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhc---CCEE
Confidence            69999999999999999999999999999999888776655     457889999999999999998876543   4999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.+++.+++.++|.|.++      +++||++||..+..+              
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~iv~isS~~~~~~--------------  136 (230)
T 3guy_A           77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ------PVNVVMIMSTAAQQP--------------  136 (230)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS------CCEEEEECCGGGTSC--------------
T ss_pred             EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------CCeEEEEeecccCCC--------------
Confidence            9999986542  367788999999999999999999999999775      359999999988763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|++||+|++.|+++++.+++++|  |+||+|+||+++|++.....      ...+..++.+|+|+|+.++|++
T Consensus       137 -~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~dvA~~i~~l~  207 (230)
T 3guy_A          137 -KAQESTYCAVKWAVKGLIESVRLELKGKP--MKIIAVYPGGMATEFWETSG------KSLDTSSFMSAEDAALMIHGAL  207 (230)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEECCC----------------------CCCHHHHHHHHHHHC
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEEECCcccChHHHhcC------CCCCcccCCCHHHHHHHHHHHH
Confidence             66778999999999999999999999999  99999999999999876542      2234566789999999999999


Q ss_pred             cCCCccCCCceeeccCcc
Q 023054          239 LHPNLKGVTGKYFLDCNE  256 (288)
Q Consensus       239 ~~~~~~~~tG~~~~~~~~  256 (288)
                      +++...++||+.+.++..
T Consensus       208 ~~~~~~~itg~~~~~~~~  225 (230)
T 3guy_A          208 ANIGNGYVSDITVNREGH  225 (230)
T ss_dssp             CEETTEEEEEEEEEC---
T ss_pred             hCcCCCCccceeecCCCC
Confidence            878899999999875543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=4.6e-39  Score=278.60  Aligned_cols=245  Identities=18%  Similarity=0.211  Sum_probs=202.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE---------eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA---------ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFI   71 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~---------~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (288)
                      |||||++|||+++|+.|+++|++|+++         +|+.+.++++.+++...+  ..   ..+|+++.++++++++++.
T Consensus        13 lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~--~~---~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A           13 LVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG--GK---AVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT--CE---EEEECCCGGGHHHHHHHHH
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC--Ce---EEEeCCCHHHHHHHHHHHH
Confidence            699999999999999999999999996         457788888888776542  22   3589999999999999999


Q ss_pred             hcCCCcceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc
Q 023054           72 ALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI  149 (288)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  149 (288)
                      +.++++|+||||||+....  .+.+.++|+..+++|+.++++++++++|+|.+++     .++||++||..+..+     
T Consensus        88 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~grIV~vsS~~~~~~-----  157 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-----YGRIIMTASASGIYG-----  157 (319)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC-----
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEECChhhccC-----
Confidence            9999999999999987542  3567889999999999999999999999998865     589999999988763     


Q ss_pred             cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHH
Q 023054          150 RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       150 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (288)
                                .++...|++||+++..|++.+++++++.|  |+||+|+||++ |++..... ....      ....+|++
T Consensus       158 ----------~~~~~~Y~aSK~a~~~~~~~la~el~~~g--I~vn~v~PG~~-t~~~~~~~-~~~~------~~~~~p~d  217 (319)
T 1gz6_A          158 ----------NFGQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAG-SRMTETVM-PEDL------VEALKPEY  217 (319)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECC-STTTGGGS-CHHH------HHHSCGGG
T ss_pred             ----------CCCCHHHHHHHHHHHHHHHHHHHHhcccC--EEEEEEeCCCc-cccccccC-Chhh------hccCCHHH
Confidence                      45678999999999999999999999999  99999999998 88765321 1111      12368999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCccCC-------------CCccccCHHHHHHHHHHHHHHHHh
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNEMP-------------PSALARDETLAKKLWDFSNKMINS  282 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~  282 (288)
                      +|..++||++ + ..+++|++|. ++|+..             ..+...+++.++++|+.++++++.
T Consensus       218 vA~~~~~l~s-~-~~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  282 (319)
T 1gz6_A          218 VAPLVLWLCH-E-SCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNA  282 (319)
T ss_dssp             THHHHHHHTS-T-TCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTTC
T ss_pred             HHHHHHHHhC-c-hhhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhccccc
Confidence            9999999997 3 4578999886 444321             124567999999999999987654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3e-39  Score=274.01  Aligned_cols=225  Identities=23%  Similarity=0.238  Sum_probs=183.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...   .++.++.+|++|.++++++++++.+.++++|+|
T Consensus        25 lVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           25 FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             EESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999999888877776432   468999999999999999999998889999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCC-eEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEG-RIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+...   ..+.+.++|++++++|+.+++++++.++|.|.+++     .| +||++||..+..+            
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-----~g~~IV~isS~~~~~~------------  164 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-----AGASIVNLGSVAGKWP------------  164 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-----TTCEEEEECCGGGTSC------------
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCcEEEEeCCchhccC------------
Confidence            999998642   33667789999999999999999999999998764     57 9999999988753            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-HH-HHHHHHHhhhcCChHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-VM-RFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-~~-~~~~~~~~~~~~~~~~~a~~~  234 (288)
                         .++...|++||++++.|+++++.++++.|  |+||+|+||+++|++...... .. ............+|+|+|+.+
T Consensus       165 ---~~~~~~Y~asKaa~~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v  239 (272)
T 2nwq_A          165 ---YPGSHVYGGTKAFVEQFSLNLRCDLQGTG--VRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETI  239 (272)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHTTCTTSC--CEEEEEEECSBC--------------------CCCCBCHHHHHHHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhCccC--eEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHH
Confidence               56678999999999999999999999999  999999999999998653210 00 111112222346999999999


Q ss_pred             HHHhcCCCccCCCceeec
Q 023054          235 CYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~  252 (288)
                      +||++  +..+++|+.+.
T Consensus       240 ~~l~s--~~~~~~g~~i~  255 (272)
T 2nwq_A          240 FWIMN--QPAHLNINSLE  255 (272)
T ss_dssp             HHHHT--SCTTEEEEEEE
T ss_pred             HHHhC--CCccCccceEE
Confidence            99997  45788998775

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=3e-38  Score=266.12  Aligned_cols=231  Identities=23%  Similarity=0.233  Sum_probs=194.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        17 lItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   94 (260)
T 3awd_A           17 IVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDIL   94 (260)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888877777654  4579999999999999999999999988999999


Q ss_pred             EEccccCC-C--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMF-C--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~-~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+.. .  ..+.+.+++++.+++|+.+++.++++++|.|.+++     .++||++||..+..+             
T Consensus        95 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-------------  156 (260)
T 3awd_A           95 VACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-----QGVIVAIGSMSGLIV-------------  156 (260)
T ss_dssp             EECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------------
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-----CCEEEEEecchhccc-------------
Confidence            99999865 2  23567788999999999999999999999998765     689999999987653             


Q ss_pred             CCCCcc--ccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCC-CC---hHHHHHHHHHHhhhcCChHHHH
Q 023054          158 AGYSDK--KAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFK-HS---AVVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       158 ~~~~~~--~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~-~~---~~~~~~~~~~~~~~~~~~~~~a  231 (288)
                        .++.  ..|++||++++.+++.++.++++.|  |+|++|+||++.|++.. ..   .....+....+...+.+|+|+|
T Consensus       157 --~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  232 (260)
T 3awd_A          157 --NRPQQQAAYNASKAGVHQYIRSLAAEWAPHG--IRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVA  232 (260)
T ss_dssp             --CSSSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHH
T ss_pred             --CCCCCccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHH
Confidence              2233  7899999999999999999999998  99999999999999875 21   1111222223445577999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCcc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.++++++ +...+++|+.|. ++|.
T Consensus       233 ~~~~~l~~-~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          233 SVVQFLAS-DAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             HHHHHHhC-chhccCCCcEEEECCce
Confidence            99999997 677889999877 4543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=1e-38  Score=266.52  Aligned_cols=232  Identities=23%  Similarity=0.271  Sum_probs=195.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|+++ +|+.+..+++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         5 lVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (244)
T 1edo_A            5 VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999994 89988888877777654  457899999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+....  .+.+.+++++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+             
T Consensus        83 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-------------  144 (244)
T 1edo_A           83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-----KGRIINIASVVGLIG-------------  144 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC-------------
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-----CCEEEEECChhhcCC-------------
Confidence            99999987542  3567788999999999999999999999998765     689999999987763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|+++|++++.+++.++.++...+  |+||+|+||++.|++.......  .......+..++.+|+|+|+.++
T Consensus       145 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  220 (244)
T 1edo_A          145 --NIGQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVE  220 (244)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHH
T ss_pred             --CCCCccchhhHHHHHHHHHHHHHHhhhcC--CEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHH
Confidence              45678899999999999999999999988  9999999999999986543211  11112234455679999999999


Q ss_pred             HHhcCCCccCCCceeec-cCcc
Q 023054          236 YVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |++.++...+++|+.|. ++|+
T Consensus       221 ~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          221 FLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHhCCCccCCcCCCEEEeCCCc
Confidence            99954778899999886 5543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.1e-39  Score=273.93  Aligned_cols=221  Identities=20%  Similarity=0.230  Sum_probs=186.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.             +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        12 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l   78 (264)
T 2dtx_A           12 IVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVL   78 (264)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999998643             2468899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.+++     .++||++||..+..+              
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  139 (264)
T 2dtx_A           79 VNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-----DPSIVNISSVQASII--------------  139 (264)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-----SCEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEECCchhccC--------------
Confidence            999998654  23567789999999999999999999999997754     589999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------------HHHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------------VVMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~~~~  225 (288)
                       .++...|++||++++.|+++++.++++.   |+||+|+||+++|++.....             ....+....+..++.
T Consensus       140 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~---i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  215 (264)
T 2dtx_A          140 -TKNASAYVTSKHAVIGLTKSIALDYAPL---LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIG  215 (264)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCB
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhcCC---cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCc
Confidence             5677899999999999999999999875   99999999999999864321             011122223455678


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCccCC
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      +|+|+|+.++||++ +...+++|+.|. ++|...
T Consensus       216 ~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~~  248 (264)
T 2dtx_A          216 KPQEVASAVAFLAS-REASFITGTCLYVDGGLSI  248 (264)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhC-chhcCCCCcEEEECCCccc
Confidence            99999999999997 778899999887 666543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-39  Score=270.74  Aligned_cols=222  Identities=25%  Similarity=0.293  Sum_probs=181.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.++++++. ++      .++.++.+|++|.++++++.    +.++++|+|
T Consensus        10 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~~~~~~~~~~----~~~~~id~l   78 (246)
T 2ag5_A           10 ILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY------PGIQTRVLDVTKKKQIDQFA----NEVERLDVL   78 (246)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS------TTEEEEECCTTCHHHHHHHH----HHCSCCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc------cCceEEEeeCCCHHHHHHHH----HHhCCCCEE
Confidence            69999999999999999999999999999987665433 21      26889999999999988443    446899999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.+++.++++++|+|.+++     .++||++||..+..+              
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  139 (246)
T 2ag5_A           79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-----SGNIINMSSVASSVK--------------  139 (246)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCSBTTTB--------------
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CceEEEEechHhCcC--------------
Confidence            9999986542  3567788999999999999999999999998765     689999999987653              


Q ss_pred             CCC-ccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-h-------HHHHHHHHHHhhhcCChHH
Q 023054          159 GYS-DKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-A-------VVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       159 ~~~-~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~-------~~~~~~~~~~~~~~~~~~~  229 (288)
                       .+ +...|++||++++.++++++.+++++|  |+||+|+||++.|++.... .       ....+....+..++.+|+|
T Consensus       140 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  216 (246)
T 2ag5_A          140 -GVVNRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEE  216 (246)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHH
T ss_pred             -CCCCCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHH
Confidence             33 668899999999999999999999999  9999999999999975431 0       0111122224455679999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+.++||++ +...++||+.|. ++|+
T Consensus       217 vA~~v~~l~s-~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          217 IAMLCVYLAS-DESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEECTTG
T ss_pred             HHHHHHHHhC-ccccCCCCCEEEECCCc
Confidence            9999999997 788899999887 5554

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=3.6e-39  Score=271.08  Aligned_cols=227  Identities=14%  Similarity=0.139  Sum_probs=186.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+ +...  +.++.++     |.++++++++++.+.++++|+|
T Consensus         5 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~--~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            5 IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET--YPQLKPM-----SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             EESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH--CTTSEEC-----CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc--CCcEEEE-----CHHHHHHHHHHHHHHhCCCCEE
Confidence            699999999999999999999999999999887776655 5544  3344443     6778888888888888999999


Q ss_pred             EEccccC-CC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIM-FC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~-~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+. ..  ..+.+.++|++.+++|+.+++.++++++|+|.+++     .++||++||..+..+             
T Consensus        77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------------  138 (254)
T 1zmt_A           77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-----SGHIIFITSATPFGP-------------  138 (254)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCSTTTSC-------------
T ss_pred             EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECCcccccC-------------
Confidence            9999986 32  33667889999999999999999999999998765     689999999987753             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcc---------cCCCCCCChH-HHHHHHHHHhhhcCCh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLI---------MTNLFKHSAV-VMRFLKFFSFFLWKNV  227 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v---------~t~~~~~~~~-~~~~~~~~~~~~~~~~  227 (288)
                        .++...|++||+++++|+++++.+++++|  |+||+|+||++         +|++....+. ...+....+..++.+|
T Consensus       139 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p  214 (254)
T 1zmt_A          139 --WKELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQ  214 (254)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCH
Confidence              56678999999999999999999999999  99999999999         7776554321 1122233345567799


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCccCC
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      +|+|+.++||++ +...++||++|. ++|...
T Consensus       215 ~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          215 KELGELVAFLAS-GSCDYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             HHHHHHHHHHHT-TSCGGGTTCEEEESTTCCC
T ss_pred             HHHHHHHHHHhC-cccCCccCCEEEECCCchh
Confidence            999999999997 778899999887 566543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-38  Score=270.01  Aligned_cols=231  Identities=23%  Similarity=0.297  Sum_probs=193.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        48 lITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~l  125 (285)
T 2c07_A           48 LVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILTEHKNVDIL  125 (285)
T ss_dssp             EEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999998888888777654  4578999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+              
T Consensus       126 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~--------------  186 (285)
T 2c07_A          126 VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-----YGRIINISSIVGLTG--------------  186 (285)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC--------------
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CCEEEEECChhhccC--------------
Confidence            999998654  23567788999999999999999999999998764     589999999987763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||++++.++++++.+++..|  |+||+|+||++.|++......  ........+..++.+|+|+|+.+++
T Consensus       187 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          187 -NVGQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACF  263 (285)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHH
Confidence             45678899999999999999999999998  999999999999998765421  1112222344556799999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +++ +...+++|+.|. ++|.
T Consensus       264 l~~-~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          264 LSS-DKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHS-GGGTTCCSCEEEESTTS
T ss_pred             HhC-CCcCCCCCCEEEeCCCc
Confidence            997 677899999887 4543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=8.2e-41  Score=291.21  Aligned_cols=232  Identities=16%  Similarity=0.149  Sum_probs=187.5

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCChH---------HHHHHHHHHHhh-CCCCceEEEEecCCCh--H-----
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARNMA---------AANEARQLILKE-DDTARVDTLKLDLSSI--A-----   61 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~~~---------~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~--~-----   61 (288)
                      |||||++  |||+++|++|+++|++|++++|++.         +++.....+... .....+.++.+|+++.  +     
T Consensus         6 lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~   85 (329)
T 3lt0_A            6 FIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEE   85 (329)
T ss_dssp             EEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGCCHH
T ss_pred             EEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhhhhh
Confidence            6999986  9999999999999999998877652         111111111111 1123478889999988  7     


Q ss_pred             -------------HHHHHHHHHHhcCCCcceEEEccccCC----CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhh
Q 023054           62 -------------SIKDFAQNFIALNLPLNILINNAGIMF----CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTA  124 (288)
Q Consensus        62 -------------~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  124 (288)
                                   +++++++++.+.++++|+||||||+..    +..+.+.++|++++++|+.++++++++++|+|.+  
T Consensus        86 ~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--  163 (329)
T 3lt0_A           86 TKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP--  163 (329)
T ss_dssp             HHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--
T ss_pred             hcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--
Confidence                         999999999999999999999999742    2346788999999999999999999999999976  


Q ss_pred             ccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCccc-cchhhHHHHHHHHHHHHHHhcc-cCCceEEEEeeCCccc
Q 023054          125 KETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKK-AYGQSKLANILHANELSRRFQE-EGVNITANSVHPGLIM  202 (288)
Q Consensus       125 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~~~~~-~~~~i~v~~v~PG~v~  202 (288)
                           .|+||++||..+..+               .+... .|++||+|+.+|+++|+.++++ +|  |+||+|+||+++
T Consensus       164 -----~g~Iv~isS~~~~~~---------------~~~~~~~Y~asKaal~~~~~~la~el~~~~g--I~vn~v~PG~v~  221 (329)
T 3lt0_A          164 -----QSSIISLTYHASQKV---------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYN--IRINTISAGPLK  221 (329)
T ss_dssp             -----EEEEEEEECGGGTSC---------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCCC
T ss_pred             -----CCeEEEEeCccccCC---------------CCcchHHHHHHHHHHHHHHHHHHHHhCCccC--eEEEEEecceee
Confidence                 379999999998763               55554 8999999999999999999998 88  999999999999


Q ss_pred             CCCCCCChH-----------------------------------------------HHHHHHHHHhhhcCChHHHHHHHH
Q 023054          203 TNLFKHSAV-----------------------------------------------VMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       203 t~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                      |+|......                                               ........+..++.+|+|+|+.++
T Consensus       222 T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~  301 (329)
T 3lt0_A          222 SRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVAS  301 (329)
T ss_dssp             CHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHH
T ss_pred             chhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHH
Confidence            998764310                                               122334456677889999999999


Q ss_pred             HHhcCCCccCCCceeec-cCccC
Q 023054          236 YVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ||++ +.+.++||+.|. |+|..
T Consensus       302 fL~s-~~a~~itG~~i~vdGG~~  323 (329)
T 3lt0_A          302 FLLS-RESRAITGQTIYVDNGLN  323 (329)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHhC-chhccccCcEEEEcCCee
Confidence            9997 889999999887 66654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=2.8e-38  Score=266.53  Aligned_cols=233  Identities=22%  Similarity=0.250  Sum_probs=195.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++++| +.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        11 lITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   88 (261)
T 1gee_A           11 VITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV   88 (261)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999 888887777777654  457899999999999999999999998899999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.+++++.+++|+.+++.++++++|.|.+++.    .++||++||..+..+             
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----~~~iv~isS~~~~~~-------------  151 (261)
T 1gee_A           89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI----KGTVINMSSVHEKIP-------------  151 (261)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC----CCEEEEECCGGGTSC-------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC----CCEEEEeCCHHhcCC-------------
Confidence            9999998654  235677889999999999999999999999987421    379999999887653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHH----HHHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR----FLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~  233 (288)
                        .++...|++||++++.+++.++.+++..+  |+||+|+||++.|++.........    +....+...+.+|+|+|+.
T Consensus       152 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  227 (261)
T 1gee_A          152 --WPLFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAV  227 (261)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHH
Confidence              56778999999999999999999999988  999999999999998653210111    1112234456799999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCccC
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ++|+++ +...+++|+.|. ++|..
T Consensus       228 ~~~l~~-~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          228 AAWLAS-SEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHhC-ccccCCCCcEEEEcCCcc
Confidence            999997 677899999887 55544

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=2.8e-38  Score=267.27  Aligned_cols=231  Identities=23%  Similarity=0.238  Sum_probs=178.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-CCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-LPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~   79 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++.++++++++++.+.+ +++|+
T Consensus        18 lITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~   95 (266)
T 1xq1_A           18 LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDI   95 (266)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcE
Confidence            69999999999999999999999999999999888888777655  4578999999999999999999998887 89999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.+++.++++++|.|.+++     .++||++||..+..+             
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~-------------  157 (266)
T 1xq1_A           96 LINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-----CGNIIFMSSIAGVVS-------------  157 (266)
T ss_dssp             EEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SCEEEEEC--------------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEccchhccC-------------
Confidence            9999998643  23567788999999999999999999999998765     589999999987653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                        .++...|++||++++.+++.++.+++..|  |+||+|+||++.|++.....   .........+..++.+|+|+|+.+
T Consensus       158 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (266)
T 1xq1_A          158 --ASVGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLV  233 (266)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC-------------------------CCGGGGHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence              45667899999999999999999999988  99999999999999876431   111222234555678999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +||++ +...+++|+.|. ++|+
T Consensus       234 ~~l~~-~~~~~~~G~~~~v~gG~  255 (266)
T 1xq1_A          234 AFLCM-PAASYITGQTICVDGGL  255 (266)
T ss_dssp             HHHTS-GGGTTCCSCEEECCCCE
T ss_pred             HHHcC-ccccCccCcEEEEcCCc
Confidence            99997 678899999877 5554

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=4.5e-39  Score=269.37  Aligned_cols=220  Identities=22%  Similarity=0.313  Sum_probs=180.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.++             .+..+.+|++|.++++++++++.+.++++|+|
T Consensus        19 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   85 (247)
T 1uzm_A           19 LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVL   85 (247)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------HhcCeeccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999865322             12248899999999999999999989999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.++++++|+|.+++     .++||++||..+..+              
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  146 (247)
T 1uzm_A           86 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-----FGRMIFIGSVSGLWG--------------  146 (247)
T ss_dssp             EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCCCC-----------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CCEEEEECCHhhccC--------------
Confidence            999998653  23667789999999999999999999999998764     589999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||++++.|++.++.++++.|  |+||+|+||+++|++......  ........+..++.+|+|+|+.++|
T Consensus       147 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~  223 (247)
T 1uzm_A          147 -IGNQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSF  223 (247)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHH
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             45678899999999999999999999999  999999999999998653311  1111112344567799999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |++ +...+++|+.|. ++|.
T Consensus       224 l~s-~~~~~~~G~~i~vdgG~  243 (247)
T 1uzm_A          224 LAS-EDASYISGAVIPVDGGM  243 (247)
T ss_dssp             HHS-GGGTTCCSCEEEESTTT
T ss_pred             HcC-ccccCCcCCEEEECCCc
Confidence            997 778899999887 5543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=9e-40  Score=273.12  Aligned_cols=217  Identities=20%  Similarity=0.206  Sum_probs=182.5

Q ss_pred             CcccCCChhHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLAL-RKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|++ .|++|++++|+++.            ...++.++.+|++|.++++++++.+.  ++++|+
T Consensus         8 lITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~   73 (244)
T 4e4y_A            8 LVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIK--NVSFDG   73 (244)
T ss_dssp             EEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTT--TCCEEE
T ss_pred             EEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHH--hCCCCE
Confidence            6999999999999999999 78999999987641            13457899999999999999996554  679999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+       .++||++||..+..+             
T Consensus        74 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~-------------  133 (244)
T 4e4y_A           74 IFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV-------GASIVFNGSDQCFIA-------------  133 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE-------EEEEEEECCGGGTCC-------------
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc-------CcEEEEECCHHHccC-------------
Confidence            9999998754  346788999999999999999999999999865       369999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-------------HHHHHHHHHhhhc
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-------------VMRFLKFFSFFLW  224 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-------------~~~~~~~~~~~~~  224 (288)
                        .++...|++||+++++|+++++.|++++|  |+||+|+||+++|++......             ........+..++
T Consensus       134 --~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  209 (244)
T 4e4y_A          134 --KPNSFAYTLSKGAIAQMTKSLALDLAKYQ--IRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRI  209 (244)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSC
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHHcC--eEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCC
Confidence              66778999999999999999999999999  999999999999998654311             1112222355667


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .+|+|+|+.++||++ +...++||+.|. |+|+
T Consensus       210 ~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          210 AQPQEIAELVIFLLS-DKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhc-CccccccCCeEeECCCc
Confidence            899999999999997 788999999887 5554

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=4.3e-38  Score=263.24  Aligned_cols=230  Identities=21%  Similarity=0.282  Sum_probs=179.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|+++ .|+++..++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         9 lItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   86 (247)
T 2hq1_A            9 IVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMDAFGRIDI   86 (247)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999 67777777777776554  467899999999999999999999998899999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.+++++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+             
T Consensus        87 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-------------  148 (247)
T 2hq1_A           87 LVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-----SGKIINITSIAGIIG-------------  148 (247)
T ss_dssp             EEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-----CEEEEEECC-------------------
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcChhhccC-------------
Confidence            9999998643  23567788999999999999999999999998765     589999999887653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|++||++++.+++.++.+++..+  |+||+|+||++.|++......  ...+....+...+.+|+|+|+.++
T Consensus       149 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (247)
T 2hq1_A          149 --NAGQANYAASKAGLIGFTKSIAKEFAAKG--IYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVG  224 (247)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             --CCCCcHhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHH
Confidence              45678899999999999999999999998  999999999999987654321  111222234455679999999999


Q ss_pred             HHhcCCCccCCCceeec-cCc
Q 023054          236 YVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      ++++ +...+++|+.|. ++|
T Consensus       225 ~l~~-~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          225 FLAS-DDSNYITGQVINIDGG  244 (247)
T ss_dssp             HHHS-GGGTTCCSCEEEESTT
T ss_pred             HHcC-cccccccCcEEEeCCC
Confidence            9996 667889998777 444

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.1e-38  Score=270.88  Aligned_cols=217  Identities=21%  Similarity=0.242  Sum_probs=184.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        35 lVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l  112 (301)
T 3tjr_A           35 VVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVV  112 (301)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            69999999999999999999999999999999999998888765  5679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++.+++|+.+++.++++++|+|.+++.    .|+||++||..+..+              
T Consensus       113 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~----~g~iv~isS~~~~~~--------------  174 (301)
T 3tjr_A          113 FSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT----GGHIAFTASFAGLVP--------------  174 (301)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC----CcEEEEeCchhhcCC--------------
Confidence            999998754  236778899999999999999999999999987531    479999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH------------HHHHHHHhhhcCC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM------------RFLKFFSFFLWKN  226 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~------------~~~~~~~~~~~~~  226 (288)
                       .++...|++||+|+++|+++++.++++.|  |+||+|+||+++|++........            .+..........+
T Consensus       175 -~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (301)
T 3tjr_A          175 -NAGLGTYGVAKYGVVGLAETLAREVKPNG--IGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVS  251 (301)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEECCSCCCSSHHHHHHHHC----------------------CCC
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCC
Confidence             66788999999999999999999999999  99999999999999865431100            0001112234569


Q ss_pred             hHHHHHHHHHHhcC
Q 023054          227 VPQGAATTCYVALH  240 (288)
Q Consensus       227 ~~~~a~~~~~l~~~  240 (288)
                      |+++|+.++.++..
T Consensus       252 pedvA~~i~~~l~~  265 (301)
T 3tjr_A          252 ADDVARLTADAILA  265 (301)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999999963

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=6.4e-38  Score=261.79  Aligned_cols=232  Identities=22%  Similarity=0.254  Sum_probs=194.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEE-EEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDT-LKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||++++++|+++|++|+++ +|+.+.++++.+++...  +.++.+ +.+|++|.++++++++++.+.++++|
T Consensus         5 lITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (245)
T 2ph3_A            5 LITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVLGGLD   82 (245)
T ss_dssp             EETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhcCCCC
Confidence            699999999999999999999999998 89998888877777654  345666 89999999999999999999889999


Q ss_pred             eEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           79 ILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        79 ~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +||||||+....  .+.+.+++++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+            
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~------------  145 (245)
T 2ph3_A           83 TLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-----FGRIVNITSVVGILG------------  145 (245)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-----CCEEEEEeChhhccC------------
Confidence            999999986542  3567788999999999999999999999998764     589999999987763            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                         .++...|++||++++.+++.++.++...+  |++++|+||++.|++......  ........+...+.+|+|+|+.+
T Consensus       146 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  220 (245)
T 2ph3_A          146 ---NPGQANYVASKAGLIGFTRAVAKEYAQRG--ITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAV  220 (245)
T ss_dssp             ---CSSBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence               45678999999999999999999999988  999999999999998654321  11122223445567999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCccC
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +++++ +...+++|+++. ++|..
T Consensus       221 ~~l~~-~~~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          221 AFLVS-EKAGYITGQTLCVDGGLT  243 (245)
T ss_dssp             HHHTS-GGGTTCCSCEEEESTTCS
T ss_pred             HHHhC-cccccccCCEEEECCCCC
Confidence            99997 567789999887 55543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=3.1e-38  Score=271.80  Aligned_cols=259  Identities=17%  Similarity=0.217  Sum_probs=205.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++...+ +.++.++.+|++|.++++++++.+.+.++++|+|
T Consensus        30 lITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l  108 (302)
T 1w6u_A           30 FITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIV  108 (302)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999998888888776543 3568999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++.+++|+.+++.+++.++|.|.+...    .++||++||..+..+              
T Consensus       109 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----~~~iv~isS~~~~~~--------------  170 (302)
T 1w6u_A          109 INNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK----GAAFLSITTIYAETG--------------  170 (302)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----CEEEEEECCTHHHHC--------------
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----CCEEEEEcccccccC--------------
Confidence            999997643  235677889999999999999999999999974321    579999999987763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC-CCCCCh----HHHHHHHHHHhhhcCChHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN-LFKHSA----VVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~-~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                       .++...|++||++++.+++.++.+++..|  |+||+|+||++.|+ +.....    .........+..++.+|+|+|+.
T Consensus       171 -~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~  247 (302)
T 1w6u_A          171 -SGFVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANL  247 (302)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHH
Confidence             56678899999999999999999999999  99999999999997 433221    11122222344556799999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCccCCC--CccccCHHHHHHHHHHHHHHHHh
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNEMPP--SALARDETLAKKLWDFSNKMINS  282 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  282 (288)
                      ++++++ +...+++|+.|. ++|....  .......+.....|+.++++++.
T Consensus       248 ~~~l~~-~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  298 (302)
T 1w6u_A          248 AAFLCS-DYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEELIRK  298 (302)
T ss_dssp             HHHHTS-GGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTTC---
T ss_pred             HHHHcC-CcccccCCCEEEECCCeeeccCCccccchhhccccccChhhhccC
Confidence            999997 677899999887 5554221  22233445567789999887664

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-37  Score=259.42  Aligned_cols=222  Identities=22%  Similarity=0.285  Sum_probs=193.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-------EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRKA-------HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |||||++|||++++++|+++|+       +|++++|+.+.++++.+++...  +.++.++.+|++|.++++++++++.+.
T Consensus         6 lITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (244)
T 2bd0_A            6 LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHIVER   83 (244)
T ss_dssp             EEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHHHHHh
Confidence            6999999999999999999999       9999999998888887777654  467999999999999999999999999


Q ss_pred             CCCcceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           74 NLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      ++++|+||||||+....  .+.+.+++++.+++|+.+++.+++.++|+|.+++     .++||++||..+..+       
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~-------  151 (244)
T 2bd0_A           84 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-----SGHIFFITSVAATKA-------  151 (244)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------
T ss_pred             CCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CCEEEEEecchhcCC-------
Confidence            99999999999986432  3567788999999999999999999999998765     589999999987753       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a  231 (288)
                              .++...|++||++++.|+++++.+++..|  |+|++|+||++.|++........       ...+.+|+|+|
T Consensus       152 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~-------~~~~~~~~dva  214 (244)
T 2bd0_A          152 --------FRHSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVDDEM-------QALMMMPEDIA  214 (244)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCCCSTT-------GGGSBCHHHHH
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEECCCccchhhhhccccc-------cccCCCHHHHH
Confidence                    56678999999999999999999999988  99999999999999976542110       23567999999


Q ss_pred             HHHHHHhcCCCccCCCceeeccC
Q 023054          232 ATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +.++++++ +...+++|+.+...
T Consensus       215 ~~~~~l~~-~~~~~~~g~~~~~~  236 (244)
T 2bd0_A          215 APVVQAYL-QPSRTVVEEIILRP  236 (244)
T ss_dssp             HHHHHHHT-SCTTEEEEEEEEEE
T ss_pred             HHHHHHHh-CCccccchheEEec
Confidence            99999997 77888999877643

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.6e-37  Score=259.90  Aligned_cols=231  Identities=23%  Similarity=0.267  Sum_probs=194.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++.... +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        11 lVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   89 (248)
T 2pnf_A           11 LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYNLVDGIDIL   89 (248)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            699999999999999999999999999999988888777765522 4578999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||.....  .+.+.+++++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+              
T Consensus        90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~--------------  150 (248)
T 2pnf_A           90 VNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-----WGRIVNISSVVGFTG--------------  150 (248)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-----CEEEEEECCHHHHHC--------------
T ss_pred             EECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CcEEEEEccHHhcCC--------------
Confidence            9999986542  3567788999999999999999999999998765     589999999887653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|+++|++++.+++.++.+++..+  |+||+|+||++.|++.......  ..+....+...+.+|+|+|+.+++
T Consensus       151 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  227 (248)
T 2pnf_A          151 -NVGQVNYSTTKAGLIGFTKSLAKELAPRN--VLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLF  227 (248)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHH
Confidence             45668899999999999999999999988  9999999999999987644211  111122344556799999999999


Q ss_pred             HhcCCCccCCCceeec-cCc
Q 023054          237 VALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +++ +...+++|+.+. ++|
T Consensus       228 l~~-~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          228 LCS-ELASYITGEVIHVNGG  246 (248)
T ss_dssp             HHS-GGGTTCCSCEEEESTT
T ss_pred             HhC-chhhcCCCcEEEeCCC
Confidence            997 667889999776 444

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=6.8e-38  Score=263.07  Aligned_cols=227  Identities=26%  Similarity=0.315  Sum_probs=189.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCce-EEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARV-DTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++ .++.+|++|.++++++++++.+ ++++|+
T Consensus        15 lITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id~   88 (254)
T 2wsb_A           15 AVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEAEA-VAPVSI   88 (254)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHHHH-HSCCCE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHHHh-hCCCcE
Confidence            69999999999999999999999999999998887777666     2356 8899999999999999999988 889999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.+++++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+             
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~-------------  150 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-----AGAIVNLGSMSGTIV-------------  150 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------------
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEecchhccC-------------
Confidence            9999998654  23566788999999999999999999999998765     589999999987653             


Q ss_pred             CCCCcc--ccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHH
Q 023054          158 AGYSDK--KAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       158 ~~~~~~--~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a  231 (288)
                        .+..  ..|++||++++.+++.++.+++.+|  |+|++|+||++.|++.....    ....+....+...+.+|+|+|
T Consensus       151 --~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  226 (254)
T 2wsb_A          151 --NRPQFASSYMASKGAVHQLTRALAAEWAGRG--VRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIA  226 (254)
T ss_dssp             --CSSSCBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHH
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHH
Confidence              2333  7899999999999999999999988  99999999999999764321    111122223445567999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCcc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.++++++ +...+++|+.+. ++|.
T Consensus       227 ~~~~~l~~-~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          227 AAALFLAS-PAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhC-cccccccCCEEEECCCE
Confidence            99999997 677899999887 5543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1e-37  Score=263.51  Aligned_cols=240  Identities=21%  Similarity=0.254  Sum_probs=193.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++..+++.... +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        18 lITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   96 (265)
T 1h5q_A           18 IVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGL   96 (265)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            699999999999999999999999999997666555555554432 4578999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.+++++.+++|+.+++.++++++|.|.+++.    .++||++||..+..+.+..        ..
T Consensus        97 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----~~~iv~~sS~~~~~~~~~~--------~~  164 (265)
T 1h5q_A           97 IANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ----KGSIVVTSSMSSQIINQSS--------LN  164 (265)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSCCEEE--------TT
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCC----CceEEEeCCchhhcccccc--------cc
Confidence            9999986542  35677889999999999999999999999987531    3799999998876531110        01


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      +..+...|++||++++.+++.++.+++..+  |+||+|+||++.|++......  ...+....+..++.+|+|+|+.++|
T Consensus       165 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (265)
T 1h5q_A          165 GSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAIL  242 (265)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHh
Confidence            123367899999999999999999999999  999999999999998765411  1122222344567799999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +++ +...+++|+.+. ++|.
T Consensus       243 l~~-~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          243 LLS-DHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             HHS-GGGTTCCSCEEEECTTG
T ss_pred             hcc-CchhcCcCcEEEecCCE
Confidence            997 677899999776 5553

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.3e-37  Score=261.44  Aligned_cols=229  Identities=22%  Similarity=0.292  Sum_probs=193.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        15 lVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   92 (255)
T 1fmc_A           15 IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAISKLGKVDIL   92 (255)
T ss_dssp             EETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999998888887777654  4578899999999999999999999888999999


Q ss_pred             EEccccCCCC-CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFCP-YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||||..... .+.+.+++++.+++|+.+++.+++.++|.|.+.+     .++||++||..+..+               
T Consensus        93 i~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~---------------  152 (255)
T 1fmc_A           93 VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-----GGVILTITSMAAENK---------------  152 (255)
T ss_dssp             EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTCC---------------
T ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcchhhcCC---------------
Confidence            9999986542 2556788999999999999999999999998765     589999999987652               


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--h-HHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--A-VVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~-~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      .++...|++||++++.+++.++.+++..+  |++|+|+||++.|++....  + .........+...+.+|+|+|+.+++
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  230 (255)
T 1fmc_A          153 NINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALF  230 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHH
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence            45678899999999999999999999888  9999999999999875432  1 11222222344556799999999999


Q ss_pred             HhcCCCccCCCceeeccC
Q 023054          237 VALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~~~  254 (288)
                      +++ +...+++|+.|..+
T Consensus       231 l~~-~~~~~~~G~~~~v~  247 (255)
T 1fmc_A          231 LCS-PAASWVSGQILTVS  247 (255)
T ss_dssp             HHS-GGGTTCCSCEEEES
T ss_pred             HhC-CccccCCCcEEEEC
Confidence            996 66788999877743

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=8.3e-39  Score=281.35  Aligned_cols=246  Identities=13%  Similarity=0.014  Sum_probs=196.2

Q ss_pred             CcccCCChhHHHHHHHHHH-CCCEEEEEeCChHHHH------------HHHHHHHhhCCCCceEEEEecCCChHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLAL-RKAHVIIAARNMAAAN------------EARQLILKEDDTARVDTLKLDLSSIASIKDFA   67 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~-~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   67 (288)
                      |||||++|||+++|+.|++ +|++|++++|+.+..+            .+.+++...  +.++..+.+|++|.+++++++
T Consensus        65 LVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~~v~~~v  142 (422)
T 3s8m_A           65 LVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDAARAQVI  142 (422)
T ss_dssp             EEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHH
T ss_pred             EEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHH
Confidence            6999999999999999999 9999999999765432            123444443  567889999999999999999


Q ss_pred             HHHHhcC-CCcceEEEccccC---------------CCC---------------------CCCCCCcchhhhhhhhhHHH
Q 023054           68 QNFIALN-LPLNILINNAGIM---------------FCP---------------------YQISEDGIEMQFATNHIGHF  110 (288)
Q Consensus        68 ~~~~~~~-~~id~lv~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~n~~~~~  110 (288)
                      +.+.+.+ |+||+||||||+.               .+.                     .+.+.++|+.++++|..+.|
T Consensus       143 ~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~  222 (422)
T 3s8m_A          143 ELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDW  222 (422)
T ss_dssp             HHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHH
Confidence            9999999 9999999999872               111                     13577889999999999987


Q ss_pred             -HHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCcc--ccchhhHHHHHHHHHHHHHHhccc
Q 023054          111 -LLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK--KAYGQSKLANILHANELSRRFQEE  187 (288)
Q Consensus       111 -~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~~~~~~  187 (288)
                       .+++++.+.+....     +|+||++||+.+..+               .+..  .+|++||+|+.+|+++|+.|+++.
T Consensus       223 ~~~~~a~~~~~m~~~-----gG~IVniSSi~g~~~---------------~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~  282 (422)
T 3s8m_A          223 ELWIDALEGAGVLAD-----GARSVAFSYIGTEIT---------------WPIYWHGALGKAKVDLDRTAQRLNARLAKH  282 (422)
T ss_dssp             HHHHHHHHHTTCEEE-----EEEEEEEEECCCGGG---------------HHHHTSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhhC-----CCEEEEEeCchhhcc---------------CCCccchHHHHHHHHHHHHHHHHHHHhCcc
Confidence             78888766432222     589999999988763               4444  789999999999999999999999


Q ss_pred             CCceEEEEeeCCcccCCCCCCChHHHHHH--HHHHhhhcCChHHHHHHHHHHhcCCCccCCC-cee--eccCccCCCCcc
Q 023054          188 GVNITANSVHPGLIMTNLFKHSAVVMRFL--KFFSFFLWKNVPQGAATTCYVALHPNLKGVT-GKY--FLDCNEMPPSAL  262 (288)
Q Consensus       188 ~~~i~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~t-G~~--~~~~~~~~~~~~  262 (288)
                      |  ||||+|+||++.|++....+......  ...+..+..+||++|+.+.||++ + .-|.+ |..  +.+.+..+.+++
T Consensus       283 G--IRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~s-d-~ly~~~~~~~~~d~~~~~r~d~~  358 (422)
T 3s8m_A          283 G--GGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFR-E-RLYRQDGQPAEVDEQNRLRLDDW  358 (422)
T ss_dssp             T--CEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH-H-TTTCTTCCCCCCCTTSCEESCTT
T ss_pred             C--EEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhc-c-hhhccCCCCcccCCCCCCccchh
Confidence            9  99999999999999987664332211  12366778899999999999997 3 33654 554  345667888899


Q ss_pred             ccCHHHHHHH
Q 023054          263 ARDETLAKKL  272 (288)
Q Consensus       263 ~~~~~~~~~~  272 (288)
                      .+++++|++.
T Consensus       359 e~~~~~q~~~  368 (422)
T 3s8m_A          359 ELRDDVQDAC  368 (422)
T ss_dssp             TTSHHHHHHH
T ss_pred             hCCHHHHHHH
Confidence            9999999644

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.7e-37  Score=269.03  Aligned_cols=225  Identities=21%  Similarity=0.201  Sum_probs=181.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.++++.+++...+++.++.++.+|++|.++++++++.+.+.++++|+|
T Consensus        12 lVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   91 (319)
T 3ioy_A           12 FVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSIL   91 (319)
T ss_dssp             EEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEE
T ss_pred             EEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            69999999999999999999999999999999999999888877545589999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhc-cCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAK-ETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...  ..+.+.+++++.+++|+.|+++++++++|.|.++.. .....|+||++||.++..+             
T Consensus        92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~-------------  158 (319)
T 3ioy_A           92 CNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA-------------  158 (319)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC-------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC-------------
Confidence            999998654  336677899999999999999999999999987511 1112689999999998863             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHH------------HHHH--hhh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFL------------KFFS--FFL  223 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~------------~~~~--~~~  223 (288)
                        .+....|++||+|+++|+++++.++...|  |+|++|+||+|.|++...........            ..+.  ...
T Consensus       159 --~~~~~~Y~aSKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (319)
T 3ioy_A          159 --AGSPGIYNTTKFAVRGLSESLHYSLLKYE--IGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEF  234 (319)
T ss_dssp             --CSSSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCCBC-----------------------------CCGGGS
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhc
Confidence              56678999999999999999999999999  99999999999999976432111110            0010  011


Q ss_pred             cCChHHHHHHHHHHhcCCC
Q 023054          224 WKNVPQGAATTCYVALHPN  242 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~  242 (288)
                      ..+|+++|+.++.++..+.
T Consensus       235 ~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          235 GMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             SBCHHHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHcCC
Confidence            2689999999999997543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.9e-38  Score=275.46  Aligned_cols=245  Identities=9%  Similarity=-0.012  Sum_probs=195.8

Q ss_pred             CcccCCChhHHHHHHHHHH-CCCEEEEEeCChHHHH------------HHHHHHHhhCCCCceEEEEecCCChHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLAL-RKAHVIIAARNMAAAN------------EARQLILKEDDTARVDTLKLDLSSIASIKDFA   67 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~-~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   67 (288)
                      |||||++|||+++|+.|++ +|++|++++|+.+..+            .+.+.+...  +.++..+.+|++|.+++++++
T Consensus        51 LVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~~~v~~~v  128 (405)
T 3zu3_A           51 LVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSDEIKQLTI  128 (405)
T ss_dssp             EEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHH
T ss_pred             EEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHH
Confidence            6999999999999999999 9999999998754321            223334433  567889999999999999999


Q ss_pred             HHHHhcCCCcceEEEccccC---------------CCC---------------------CCCCCCcchhhhhhhhhHHH-
Q 023054           68 QNFIALNLPLNILINNAGIM---------------FCP---------------------YQISEDGIEMQFATNHIGHF-  110 (288)
Q Consensus        68 ~~~~~~~~~id~lv~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~n~~~~~-  110 (288)
                      +++.+.+|++|+||||||+.               .+.                     .+.+.++|++++++|..+.| 
T Consensus       129 ~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~  208 (405)
T 3zu3_A          129 DAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQ  208 (405)
T ss_dssp             HHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHH
T ss_pred             HHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHH
Confidence            99999999999999999974               111                     34577899999999999998 


Q ss_pred             HHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCcc--ccchhhHHHHHHHHHHHHHHhccc-
Q 023054          111 LLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK--KAYGQSKLANILHANELSRRFQEE-  187 (288)
Q Consensus       111 ~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~~~~~~-  187 (288)
                      ++++++.+.+....     +|+||++||+.+..+               .+..  .+|++||+++.+++++|+.|+++. 
T Consensus       209 ~~~~~~~~~~m~~~-----gG~IVniSSi~~~~~---------------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~  268 (405)
T 3zu3_A          209 MWIDALLDAGVLAE-----GAQTTAFTYLGEKIT---------------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHG  268 (405)
T ss_dssp             HHHHHHHHHTCEEE-----EEEEEEEECCCCGGG---------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHhhhhC-----CcEEEEEeCchhhCc---------------CCCccchHHHHHHHHHHHHHHHHHHHhCccc
Confidence            78888765432222     589999999998763               5555  889999999999999999999999 


Q ss_pred             CCceEEEEeeCCcccCCCCCCChHHHH--HHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec--cCccCCCCccc
Q 023054          188 GVNITANSVHPGLIMTNLFKHSAVVMR--FLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL--DCNEMPPSALA  263 (288)
Q Consensus       188 ~~~i~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~--~~~~~~~~~~~  263 (288)
                      |  ||||+|+||++.|++....+....  ....-+..+..+||++|+.+.||++ +   +++|....  ..+..+.+++.
T Consensus       269 G--IRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~s-d---~l~~~~~~~D~~~~~r~d~~e  342 (405)
T 3zu3_A          269 G--GDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYK-D---SLCGDSPHMDQEGRLRADYKE  342 (405)
T ss_dssp             S--CEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH-H---TTSSSCCCBCTTSCEECCHHH
T ss_pred             C--eEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHh-c---cccCCCCCcCCCcCCCCchhh
Confidence            9  999999999999998765532211  1112256777899999999999998 3   67776543  44678888999


Q ss_pred             cCHHHHHHHH
Q 023054          264 RDETLAKKLW  273 (288)
Q Consensus       264 ~~~~~~~~~~  273 (288)
                      +++++|++.-
T Consensus       343 ~~~~~q~~~~  352 (405)
T 3zu3_A          343 LDPEVQNQVQ  352 (405)
T ss_dssp             HCHHHHHHHH
T ss_pred             cCHHHHHHHH
Confidence            9999996443

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=9.3e-38  Score=261.79  Aligned_cols=230  Identities=23%  Similarity=0.220  Sum_probs=192.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++...   .++.++.+|++|.++++++++.+.+.++++|+|
T Consensus        10 lVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   86 (251)
T 1zk4_A           10 IITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL   86 (251)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999998887776666332   568999999999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCC-CeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIE-GRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+++     . ++||++||..+..+             
T Consensus        87 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-----~~~~iv~isS~~~~~~-------------  148 (251)
T 1zk4_A           87 VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-----LGASIINMSSIEGFVG-------------  148 (251)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-----SCEEEEEECCGGGTSC-------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-----CCCEEEEeCCchhccC-------------
Confidence            999998643  23567788999999999999999999999997653     3 79999999987653             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhc--ccCCceEEEEeeCCcccCCCCCCChHHHH---HHHHHHhhhcCChHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQ--EEGVNITANSVHPGLIMTNLFKHSAVVMR---FLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~~~i~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~  232 (288)
                        .++...|++||++++.++++++.++.  ..+  |+|++|+||++.|++.........   .....+...+.+|+|+|+
T Consensus       149 --~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  224 (251)
T 1zk4_A          149 --DPSLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAY  224 (251)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHH
T ss_pred             --CCCCccchHHHHHHHHHHHHHHHHhcccCCC--eEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHH
Confidence              56678999999999999999999998  667  999999999999998654321111   111123445679999999


Q ss_pred             HHHHHhcCCCccCCCceeec-cCcc
Q 023054          233 TTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       233 ~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .++++++ +...+++|+.|. ++|+
T Consensus       225 ~~~~l~~-~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          225 ICVYLAS-NESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHcC-cccccccCcEEEECCCc
Confidence            9999997 677899999877 5543

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.1e-37  Score=263.38  Aligned_cols=231  Identities=19%  Similarity=0.191  Sum_probs=187.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        16 lVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           16 VITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            69999999999999999999999999999988777766665     4578999999999999999999999989999999


Q ss_pred             EEccccCCCCC--------CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhcc-CCCCCeEEEEcCccccccccCCccc
Q 023054           81 INNAGIMFCPY--------QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKE-TGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        81 v~~ag~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      |||||+.....        +.+.++|++.+++|+.+++.++++++|.|.++... ....++||++||..+..+       
T Consensus        91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------  163 (265)
T 2o23_A           91 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG-------  163 (265)
T ss_dssp             EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-------
T ss_pred             EECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC-------
Confidence            99999864421        25667899999999999999999999999765110 001589999999988763       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HHHHHHHHh-hhcCChH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MRFLKFFSF-FLWKNVP  228 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~-~~~~~~~  228 (288)
                              .++...|++||++++.+++.++.+++..+  |+||+|+||+++|++.......  ..+....+. .++.+|+
T Consensus       164 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (265)
T 2o23_A          164 --------QVGQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPA  233 (265)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHH
T ss_pred             --------CCCCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHH
Confidence                    55678999999999999999999999998  9999999999999987643211  111222333 4567999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+.++|+++   ..+++|+.+. ++|+
T Consensus       234 dva~~~~~l~~---~~~~~G~~i~vdgG~  259 (265)
T 2o23_A          234 EYAHLVQAIIE---NPFLNGEVIRLDGAI  259 (265)
T ss_dssp             HHHHHHHHHHH---CTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhh---cCccCceEEEECCCE
Confidence            99999999995   3689999776 5554

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=3.5e-37  Score=262.41  Aligned_cols=232  Identities=17%  Similarity=0.170  Sum_probs=191.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++..+.+...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        38 lITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l  115 (279)
T 3ctm_A           38 SVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEKDFGTIDVF  115 (279)
T ss_dssp             EETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999987776666666544  4578999999999999999999999888999999


Q ss_pred             EEccccCCC---CC-CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC---PY-QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~---~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+...   .. +.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+.           
T Consensus       116 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~~-----------  179 (279)
T 3ctm_A          116 VANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-----KGSLIITSSISGKIVN-----------  179 (279)
T ss_dssp             EECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCCTTSCC------------
T ss_pred             EECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCeEEEECchHhccCC-----------
Confidence            999998643   22 455678999999999999999999999998765     5899999998865420           


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                        ..++...|++||++++.++++++.+++..+   +||+|+||++.|++.....  ....+....+..++.+|+|+|+.+
T Consensus       180 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~---~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  254 (279)
T 3ctm_A          180 --IPQLQAPYNTAKAACTHLAKSLAIEWAPFA---RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGY  254 (279)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHTTTTC---EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHH
T ss_pred             --CCCCcccHHHHHHHHHHHHHHHHHHhcccC---CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHH
Confidence              035678899999999999999999998764   8999999999999975432  112222334555678999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+++ +...+++|+.|. ++|+
T Consensus       255 ~~l~s-~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          255 LYLAS-NASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHhC-ccccCccCCEEEECCCe
Confidence            99997 678899999887 5553

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.1e-37  Score=281.36  Aligned_cols=227  Identities=26%  Similarity=0.305  Sum_probs=183.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC-cce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP-LNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+... ++..+.....    .+.++.||++|.++++++++++.+.+++ +|+
T Consensus       217 LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          217 VVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV----GGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             EEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            699999999999999999999999999997532 2222222222    3568999999999999999999998876 999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+....  .+.+.++|++.+++|+.++++++++++|.|.+++     .++||++||..+..+             
T Consensus       292 lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-----~g~iV~iSS~a~~~g-------------  353 (454)
T 3u0b_A          292 LVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-----GGRVIGLSSMAGIAG-------------  353 (454)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-----TCEEEEECCHHHHHC-------------
T ss_pred             EEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-----CCEEEEEeChHhCCC-------------
Confidence            99999987653  3678899999999999999999999999887644     689999999998873             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH--HHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM--RFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|++||+++++|+++++.+++.+|  |+||+|+||+++|+|........  ......+..+..+|+|+|+.++
T Consensus       354 --~~g~~~YaasKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~  429 (454)
T 3u0b_A          354 --NRGQTNYATTKAGMIGLAEALAPVLADKG--ITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIA  429 (454)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHH
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHH
Confidence              67788999999999999999999999999  99999999999999987542211  1111224455679999999999


Q ss_pred             HHhcCCCccCCCceeeccCc
Q 023054          236 YVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~~  255 (288)
                      ||++ +.+.++||+.|..+|
T Consensus       430 fL~s-~~a~~itG~~i~vdG  448 (454)
T 3u0b_A          430 YFAS-PASNAVTGNTIRVCG  448 (454)
T ss_dssp             HHHC-GGGTTCCSCEEEESS
T ss_pred             HHhC-CccCCCCCcEEEECC
Confidence            9997 889999999988444

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-37  Score=259.58  Aligned_cols=225  Identities=21%  Similarity=0.289  Sum_probs=185.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++.....+.++.++.+|++|.++++++++.+.+.++++|+|
T Consensus        11 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (267)
T 2gdz_A           11 LVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDIL   90 (267)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999998888777777654334578999999999999999999999999999999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||+.      +.++|++.+++|+.+++.+++.++|.|.++..  ...++||++||..+..+               .
T Consensus        91 v~~Ag~~------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~---------------~  147 (267)
T 2gdz_A           91 VNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNG--GEGGIIINMSSLAGLMP---------------V  147 (267)
T ss_dssp             EECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTSC---------------C
T ss_pred             EECCCCC------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccC--CCCCEEEEeCCccccCC---------------C
Confidence            9999975      35789999999999999999999999976421  01479999999987753               4


Q ss_pred             CccccchhhHHHHHHHHHHH--HHHhcccCCceEEEEeeCCcccCCCCCCChHH----------HHHHHHHHhhhcCChH
Q 023054          161 SDKKAYGQSKLANILHANEL--SRRFQEEGVNITANSVHPGLIMTNLFKHSAVV----------MRFLKFFSFFLWKNVP  228 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~l--a~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~  228 (288)
                      ++...|++||++++.+++++  +.+++..|  |+||+|+||++.|++.......          .......+...+.+|+
T Consensus       148 ~~~~~Y~~sK~a~~~~~~~~ala~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (267)
T 2gdz_A          148 AQQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP  225 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHH
Confidence            56688999999999999995  68899888  9999999999999975432100          1111223444467999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeecc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                      |+|+.++|+++ +.  .++|+.|..
T Consensus       226 dvA~~v~~l~s-~~--~~~G~~~~v  247 (267)
T 2gdz_A          226 LIANGLITLIE-DD--ALNGAIMKI  247 (267)
T ss_dssp             HHHHHHHHHHH-CT--TCSSCEEEE
T ss_pred             HHHHHHHHHhc-Cc--CCCCcEEEe
Confidence            99999999997 33  489998763

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.6e-37  Score=262.32  Aligned_cols=234  Identities=23%  Similarity=0.259  Sum_probs=188.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC-----CCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED-----DTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.+++..+++...+     +..++.++.+|++|.++++++++.+.+.++
T Consensus        11 lITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (264)
T 2pd6_A           11 LVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFS   90 (264)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            699999999999999999999999999999988877766554331     115688999999999999999999999889


Q ss_pred             Cc-ceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           76 PL-NILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        76 ~i-d~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      ++ |+||||||.....  .+.+.+++++.+++|+.+++.++++++|.|.+++.    .++||++||..+..+        
T Consensus        91 ~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~g~iv~isS~~~~~~--------  158 (264)
T 2pd6_A           91 RPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC----RGSIINISSIVGKVG--------  158 (264)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCTHHHHC--------
T ss_pred             CCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC----CceEEEECChhhccC--------
Confidence            98 9999999986542  35677889999999999999999999999987521    369999999987763        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~  230 (288)
                             .++...|++||++++.+++.++.+++..|  |+|++|+||++.|++......  ...+....+...+.+|+|+
T Consensus       159 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  229 (264)
T 2pd6_A          159 -------NVGQTNYAASKAGVIGLTQTAARELGRHG--IRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDV  229 (264)
T ss_dssp             -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHH
T ss_pred             -------CCCChhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHH
Confidence                   56778999999999999999999999999  999999999999998754311  0011111233456799999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+.++++++ +...+++|+.+. ++|.
T Consensus       230 a~~~~~l~~-~~~~~~~G~~~~v~gg~  255 (264)
T 2pd6_A          230 ADVVAFLAS-EDSGYITGTSVEVTGGL  255 (264)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHcC-CcccCCCCCEEEECCCc
Confidence            999999997 667899999887 5544

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=4.8e-37  Score=261.79  Aligned_cols=214  Identities=24%  Similarity=0.261  Sum_probs=180.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         9 lVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            9 LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            69999999999999999999999999999998877665543     4579999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|++++     .++||++||..+..+              
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~--------------  144 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-----SGSVVNISSFGGQLS--------------  144 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTCC--------------
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCEEEEEcCccccCC--------------
Confidence            999998643  33667789999999999999999999999998865     689999999988763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hH-HH------HHHHHHHhhh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AV-VM------RFLKFFSFFL  223 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~-~~------~~~~~~~~~~  223 (288)
                       .++...|++||++++.++++++.++++.|  |+||+|+||++.|++....        .. ..      ......+...
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (281)
T 3m1a_A          145 -FAGFSAYSATKAALEQLSEGLADEVAPFG--IKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQ  221 (281)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCC
Confidence             66778999999999999999999999999  9999999999999986432        11 11      1111234455


Q ss_pred             cCChHHHHHHHHHHhcCC
Q 023054          224 WKNVPQGAATTCYVALHP  241 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~  241 (288)
                      +.+|+|+|+.+++++..+
T Consensus       222 ~~~~~dva~a~~~~~~~~  239 (281)
T 3m1a_A          222 PGDPAKAAAAIRLALDTE  239 (281)
T ss_dssp             CBCHHHHHHHHHHHHHSS
T ss_pred             CCCHHHHHHHHHHHHhCC
Confidence            679999999999999743

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.6e-36  Score=258.07  Aligned_cols=230  Identities=21%  Similarity=0.238  Sum_probs=191.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++..+++..   ..++.++.+|++|.++++++++++.+.++++|+|
T Consensus        20 lITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   96 (278)
T 2bgk_A           20 IITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM   96 (278)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999998877776666532   2378999999999999999999999988999999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+...    ..+.+.++|++.+++|+.+++.++++++|.|.+++     .++||++||..+..+            
T Consensus        97 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~------------  159 (278)
T 2bgk_A           97 FGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-----KGSIVFTASISSFTA------------  159 (278)
T ss_dssp             EECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-----CEEEEEECCGGGTCC------------
T ss_pred             EECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-----CCeEEEEeeccccCC------------
Confidence            999998642    23566788999999999999999999999998754     689999999987653            


Q ss_pred             CCCCC-ccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----HHHHHHHHH--HhhhcCChH
Q 023054          157 RAGYS-DKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----VVMRFLKFF--SFFLWKNVP  228 (288)
Q Consensus       157 ~~~~~-~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~--~~~~~~~~~  228 (288)
                         .+ +...|++||++++.+++.++.+++..|  |+|++|+||++.|++.....     ....+....  +...+.+|+
T Consensus       160 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
T 2bgk_A          160 ---GEGVSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE  234 (278)
T ss_dssp             ---CTTSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHH
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHH
Confidence               33 567899999999999999999999999  99999999999999876431     111111111  123467999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+.++++++ +...+++|+.|. +++.
T Consensus       235 dva~~~~~l~~-~~~~~~~G~~~~v~gg~  262 (278)
T 2bgk_A          235 DVADAVAYLAG-DESKYVSGLNLVIDGGY  262 (278)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHcC-cccccCCCCEEEECCcc
Confidence            99999999997 677899999877 4544

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2.3e-37  Score=260.30  Aligned_cols=237  Identities=21%  Similarity=0.230  Sum_probs=193.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++++|+ .+.+++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        11 lVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   88 (258)
T 3afn_B           11 LITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVAKFGGIDV   88 (258)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            699999999999999999999999999999 77777777777654  467999999999999999999999998999999


Q ss_pred             EEEcccc-CCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           80 LINNAGI-MFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        80 lv~~ag~-~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      ||||||. ...  ..+.+.+++++.+++|+.+++.++++++|.|.++....+..++||++||..+...            
T Consensus        89 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------  156 (258)
T 3afn_B           89 LINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG------------  156 (258)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC------------
T ss_pred             EEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC------------
Confidence            9999997 322  2356677899999999999999999999999764310111379999999987651            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                        +.++...|++||++++.+++.++.++++.+  |+||+|+||++.|++......  ........+...+.+|+|+|+.+
T Consensus       157 --~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  232 (258)
T 3afn_B          157 --GGPGAGLYGAAKAFLHNVHKNWVDFHTKDG--VRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAF  232 (258)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhcccC--eEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHH
Confidence              145678899999999999999999999998  999999999999998765311  11122223445567999999999


Q ss_pred             HHHhcCCCcc-CCCceeec-cCcc
Q 023054          235 CYVALHPNLK-GVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~-~~tG~~~~-~~~~  256 (288)
                      +++++ +... +++|+.|. ++|.
T Consensus       233 ~~l~~-~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          233 LFFAS-HLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             HHHHC-HHHHTTCCSEEEEESTTS
T ss_pred             HHHhC-cchhccccCCEEeECCCc
Confidence            99997 5555 89999877 4543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-37  Score=264.19  Aligned_cols=232  Identities=20%  Similarity=0.290  Sum_probs=192.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC---CCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED---DTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++....   .+.++.++.+|++|.++++++++.+.+.++++
T Consensus        22 lVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  101 (303)
T 1yxm_A           22 IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKI  101 (303)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            699999999999999999999999999999998888888876521   24679999999999999999999999989999


Q ss_pred             ceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           78 NILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        78 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |+||||||+...  ..+.+.+++++.+++|+.++++++++++|.+.+..     .++||++||.. ..            
T Consensus       102 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~-~~------------  163 (303)
T 1yxm_A          102 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-----GGSIVNIIVPT-KA------------  163 (303)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-----CEEEEEECCCC-TT------------
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-----CCeEEEEEeec-cc------------
Confidence            999999997543  23567788999999999999999999999665543     58999999987 43            


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCC-CCCh-----HHHHHHHHHHhhhcCChHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLF-KHSA-----VVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~-~~~~-----~~~~~~~~~~~~~~~~~~~  229 (288)
                         +.+....|+++|+++.++++.++.++...|  |+||+|+||++.|++. ....     .........+..++.+|+|
T Consensus       164 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  238 (303)
T 1yxm_A          164 ---GFPLAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEE  238 (303)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHH
T ss_pred             ---CCCcchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHH
Confidence               256678899999999999999999999988  9999999999999942 2111     0111112234455679999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+.++|+++ +...+++|++|. ++|.
T Consensus       239 vA~~i~~l~~-~~~~~~~G~~~~v~gG~  265 (303)
T 1yxm_A          239 VSSVVCFLLS-PAASFITGQSVDVDGGR  265 (303)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhC-cccccCCCcEEEECCCe
Confidence            9999999996 678899999887 5553

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.3e-36  Score=252.30  Aligned_cols=216  Identities=20%  Similarity=0.196  Sum_probs=177.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+.+++..+++      .++.++.+|++|.++++++++.+.+.++++|+|
T Consensus         9 lVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            9 LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999988777665543      258889999999999999999999988999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+              
T Consensus        83 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~--------------  143 (234)
T 2ehd_A           83 VNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-----GGTIVNVGSLAGKNP--------------  143 (234)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-----CEEEEEECCTTTTSC--------------
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CcEEEEECCchhcCC--------------
Confidence            999998643  23567788999999999999999999999998764     589999999987652              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|+++|++++.+++.++.+++..|  |++|+|+||++.|++....+.  .    +   ...+|+|+|+.+++++
T Consensus       144 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~--~----~---~~~~~~dvA~~~~~l~  211 (234)
T 2ehd_A          144 -FKGGAAYNASKFGLLGLAGAAMLDLREAN--VRVVNVLPGSVDTGFAGNTPG--Q----A---WKLKPEDVAQAVLFAL  211 (234)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEECC-------------------------CCHHHHHHHHHHHH
T ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCccccccc--c----c---CCCCHHHHHHHHHHHh
Confidence             55678999999999999999999999999  999999999999998754311  0    1   1369999999999999


Q ss_pred             cCCCccCCCceeeccC
Q 023054          239 LHPNLKGVTGKYFLDC  254 (288)
Q Consensus       239 ~~~~~~~~tG~~~~~~  254 (288)
                      + +...+++|+.+...
T Consensus       212 ~-~~~~~~~g~~~~~~  226 (234)
T 2ehd_A          212 E-MPGHAMVSEIELRP  226 (234)
T ss_dssp             H-SCCSSCCCEEECCC
T ss_pred             C-CCcccccceEEEee
Confidence            7 67789999876543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1e-36  Score=263.03  Aligned_cols=230  Identities=24%  Similarity=0.301  Sum_probs=187.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-HHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-ASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+.+++++..+++...+ +.++.++.+|++|. ++++++++.+.+.++++|+
T Consensus        16 lITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~   94 (311)
T 3o26_A           16 VVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDI   94 (311)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCE
Confidence            699999999999999999999999999999999999988887764 45799999999998 9999999999999999999


Q ss_pred             EEEccccCCC--------------------------------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC
Q 023054           80 LINNAGIMFC--------------------------------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET  127 (288)
Q Consensus        80 lv~~ag~~~~--------------------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  127 (288)
                      ||||||+...                                ..+.+.+++++.+++|+.+++.+++.++|+|.+++   
T Consensus        95 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~---  171 (311)
T 3o26_A           95 LVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD---  171 (311)
T ss_dssp             EEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS---
T ss_pred             EEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCC---
Confidence            9999998642                                12446678899999999999999999999998754   


Q ss_pred             CCCCeEEEEcCccccccccCCcc---------------------------ccCCCCCCCC-CccccchhhHHHHHHHHHH
Q 023054          128 GIEGRIVNLSSIAHQYTYKGGIR---------------------------FQKINDRAGY-SDKKAYGQSKLANILHANE  179 (288)
Q Consensus       128 ~~~g~iv~vsS~~~~~~~~~~~~---------------------------~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~  179 (288)
                        .++||++||..+..+......                           ........++ ++...|++||+|+++|++.
T Consensus       172 --~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  249 (311)
T 3o26_A          172 --SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV  249 (311)
T ss_dssp             --SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred             --CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence              689999999988764221100                           0000111222 3557899999999999999


Q ss_pred             HHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          180 LSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       180 la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +++++.  +  |+||+|+||+|.|+|.....             ..+|+++|+.+++++..+ ....+|.+|..+
T Consensus       250 la~e~~--~--i~v~~v~PG~v~T~~~~~~~-------------~~~~~~~a~~~~~~~~~~-~~~~~g~~~~~s  306 (311)
T 3o26_A          250 LANKIP--K--FQVNCVCPGLVKTEMNYGIG-------------NYTAEEGAEHVVRIALFP-DDGPSGFFYDCS  306 (311)
T ss_dssp             HHHHCT--T--SEEEEECCCSBCSGGGTTCC-------------SBCHHHHHHHHHHHHTCC-SSCCCSCEETC-
T ss_pred             HHhhcC--C--ceEEEecCCceecCCcCCCC-------------CCCHHHHHHHHHHHHhCC-CCCCCceEeccc
Confidence            999986  3  99999999999999976542             248999999999999743 355677777544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.5e-37  Score=287.06  Aligned_cols=240  Identities=20%  Similarity=0.184  Sum_probs=189.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++++.  ++++.+++...  +.++..+.+|++  ++.+++++++.+.+|++|+|
T Consensus       326 lVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~iDiL  399 (604)
T 2et6_A          326 LITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDIL  399 (604)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHHHHSCCCEE
T ss_pred             EEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHHhcCCCCEE
Confidence            6999999999999999999999999998643  34455666554  456777788884  45677888888888999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||.++..+              
T Consensus       400 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-----~G~IVnisS~ag~~~--------------  460 (604)
T 2et6_A          400 VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-----FGRIINITSTSGIYG--------------  460 (604)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCHHHHSC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEECChhhccC--------------
Confidence            999998654  34678899999999999999999999999998765     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|++||+|+.+|+++|+.|++++|  |+||+|+||. .|+|..... ..      ......+|+++|..++||+
T Consensus       461 -~~~~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~PG~-~T~m~~~~~-~~------~~~~~~~pe~vA~~v~~L~  529 (604)
T 2et6_A          461 -NFGQANYSSSKAGILGLSKTMAIEGAKNN--IKVNIVAPHA-ETAMTLSIM-RE------QDKNLYHADQVAPLLVYLG  529 (604)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECC-CCCC----------------CCSSCGGGTHHHHHHTT
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHhCccC--eEEEEEcCCC-CCccccccC-ch------hhccCCCHHHHHHHHHHHh
Confidence             56778999999999999999999999999  9999999996 999875421 00      0122358999999999999


Q ss_pred             cCCCccCCCceeec-cCccCC-----------CCccccCHHHHHHHHHHHHH
Q 023054          239 LHPNLKGVTGKYFL-DCNEMP-----------PSALARDETLAKKLWDFSNK  278 (288)
Q Consensus       239 ~~~~~~~~tG~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  278 (288)
                      + +.+. +||+.|. ++|+..           ......+.+.....|+...+
T Consensus       530 s-~~~~-itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  579 (604)
T 2et6_A          530 T-DDVP-VTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITD  579 (604)
T ss_dssp             S-TTCC-CCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTC
T ss_pred             C-CccC-CCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhc
Confidence            7 6677 9999887 555421           11222356666777776543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-36  Score=258.15  Aligned_cols=234  Identities=19%  Similarity=0.203  Sum_probs=190.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.++++.+++...+...++.++.+|++|.++++++++++.+.++++|+|
T Consensus        36 lVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~v  115 (279)
T 1xg5_A           36 LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDIC  115 (279)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            69999999999999999999999999999999888888888766444678999999999999999999999888999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+.+.   ..++||++||..+...             .
T Consensus       116 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~---~~g~iv~isS~~~~~~-------------~  179 (279)
T 1xg5_A          116 INNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV---DDGHIININSMSGHRV-------------L  179 (279)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC---CSCEEEEECCGGGTSC-------------C
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CCceEEEEcChhhccc-------------C
Confidence            999998654  235677889999999999999999999999987531   0279999999987521             0


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhc--ccCCceEEEEeeCCcccCCCCCCC-h-HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQ--EEGVNITANSVHPGLIMTNLFKHS-A-VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~~~i~v~~v~PG~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                      +.++...|+++|++++.|++.++.+++  ..+  |+||+|+||++.|++.... . .........+..+..+|+|+|+.+
T Consensus       180 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i  257 (279)
T 1xg5_A          180 PLSVTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAV  257 (279)
T ss_dssp             SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHH
Confidence            245667899999999999999999998  667  9999999999999984211 0 111222233444567999999999


Q ss_pred             HHHhcCCCccCCCceeecc
Q 023054          235 CYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~~  253 (288)
                      +++++ +...+.+|.+..+
T Consensus       258 ~~l~~-~~~~~~~g~i~i~  275 (279)
T 1xg5_A          258 IYVLS-TPAHIQIGDIQMR  275 (279)
T ss_dssp             HHHHH-SCTTEEEEEEEEE
T ss_pred             HHHhc-CCcceEeeeEEEc
Confidence            99997 5667777876543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=5.9e-37  Score=285.53  Aligned_cols=218  Identities=20%  Similarity=0.231  Sum_probs=182.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh---------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM---------AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFI   71 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (288)
                      |||||++|||+++|+.|+++|++|++++|+.         +.++++.+++...  +.++   .+|++|.++++++++++.
T Consensus        12 lVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~~---~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A           12 IITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGVA---VADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCEE---EEECCCTTCHHHHHHHHH
T ss_pred             EEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCeE---EEEcCCHHHHHHHHHHHH
Confidence            6999999999999999999999999998765         5677777777654  2332   369999888999999999


Q ss_pred             hcCCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc
Q 023054           72 ALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI  149 (288)
Q Consensus        72 ~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  149 (288)
                      +.+|+||+||||||+...  ..+.+.++|++++++|+.|+++++++++|+|++++     .|+||++||.++..+     
T Consensus        87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-----~G~IVnisS~ag~~~-----  156 (604)
T 2et6_A           87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-----YGRIVNTSSPAGLYG-----  156 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC-----
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEECCHHHcCC-----
Confidence            999999999999998653  34678899999999999999999999999998865     689999999998773     


Q ss_pred             cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHH
Q 023054          150 RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       150 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (288)
                                .++...|++||+|+.+|+++|+.|++++|  |+||+|+|| +.|+|...... ..      .....+|++
T Consensus       157 ----------~~~~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~Pg-~~T~m~~~~~~-~~------~~~~~~pe~  216 (604)
T 2et6_A          157 ----------NFGQANYASAKSALLGFAETLAKEGAKYN--IKANAIAPL-ARSRMTESIMP-PP------MLEKLGPEK  216 (604)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-CCCHHHHTTSC-HH------HHTTCSHHH
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEccC-CcCccccccCC-hh------hhccCCHHH
Confidence                      56778999999999999999999999999  999999998 58877543210 11      112358999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|..++||++ +. .++||+.|. ++|
T Consensus       217 vA~~v~~L~s-~~-~~itG~~~~vdgG  241 (604)
T 2et6_A          217 VAPLVLYLSS-AE-NELTGQFFEVAAG  241 (604)
T ss_dssp             HHHHHHHHTS-SS-CCCCSCEEEEETT
T ss_pred             HHHHHHHHhC-Cc-ccCCCCEEEECCC
Confidence            9999999997 56 999999887 554

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-36  Score=254.22  Aligned_cols=217  Identities=19%  Similarity=0.186  Sum_probs=176.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++..+    ++      .++.++ +|+  .++++++++.+.    ++|+|
T Consensus        23 lVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~------~~~~~~-~D~--~~~~~~~~~~~~----~iD~l   85 (249)
T 1o5i_A           23 LVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS------GHRYVV-CDL--RKDLDLLFEKVK----EVDIL   85 (249)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT------CSEEEE-CCT--TTCHHHHHHHSC----CCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh------CCeEEE-eeH--HHHHHHHHHHhc----CCCEE
Confidence            69999999999999999999999999999974322    22      256777 999  556777766553    79999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+              
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~--------------  146 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-----WGRIVAITSFSVISP--------------  146 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEcchHhcCC--------------
Confidence            999998654  23567789999999999999999999999998865     589999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHH-HHHHHHHhhhcCChHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVM-RFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~-~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                       .++...|++||++++.|+++++.+++..|  |+||+|+||++.|++....  .... .+....+..++.+|+|+|+.++
T Consensus       147 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~  223 (249)
T 1o5i_A          147 -IENLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVA  223 (249)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence             56778999999999999999999999999  9999999999999986432  1111 1222234456679999999999


Q ss_pred             HHhcCCCccCCCceeec-cCccC
Q 023054          236 YVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ||++ +...+++|+.+. ++|..
T Consensus       224 ~l~s-~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          224 FLCS-EKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTCC
T ss_pred             HHcC-ccccCCCCCEEEECCCcc
Confidence            9997 778899999887 55543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=4e-36  Score=250.89  Aligned_cols=224  Identities=17%  Similarity=0.240  Sum_probs=183.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.++++++.+++      ..+.++.+|++|.++++++++    .++++|+|
T Consensus        11 lITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~----~~~~id~v   80 (244)
T 3d3w_A           11 LVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG----SVGPVDLL   80 (244)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----TCCCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCCCEEEEeCCCHHHHHHHHH----HcCCCCEE
Confidence            69999999999999999999999999999988776655433      135677999999999988876    45789999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++.+++|+.+++.++++++|.|.+++.    .++||++||..+..+              
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~----~~~iv~~sS~~~~~~--------------  142 (244)
T 3d3w_A           81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV----PGAIVNVSSQCSQRA--------------  142 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSC--------------
T ss_pred             EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CcEEEEeCchhhccC--------------
Confidence            999998643  235667889999999999999999999999987531    379999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|++||++++.+++.++.++++.+  |+||+|+||++.|++....    .....+....+...+.+|+|+|+.+
T Consensus       143 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (244)
T 3d3w_A          143 -VTNHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAI  219 (244)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHH
Confidence             56678999999999999999999999988  9999999999999985421    1112222333455677999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +++++ +...+++|+.|. ++|+
T Consensus       220 ~~l~~-~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          220 LFLLS-DRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHHcC-ccccCCCCCEEEECCCc
Confidence            99996 667889998776 4443

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=3.9e-38  Score=272.84  Aligned_cols=232  Identities=16%  Similarity=0.095  Sum_probs=177.0

Q ss_pred             CcccC--CChhHHHHHHHHHHCCCEEEEEeCChHH------HH-HHHHHHHhhCCCC---ceEEEEec------------
Q 023054            1 MLAGG--ASGIGLETARVLALRKAHVIIAARNMAA------AN-EARQLILKEDDTA---RVDTLKLD------------   56 (288)
Q Consensus         1 lItGa--s~gIG~~ia~~La~~G~~V~~~~r~~~~------~~-~~~~~~~~~~~~~---~~~~~~~D------------   56 (288)
                      |||||  ++|||+++|+.|+++|++|++++|++..      .. ...+++.....+.   .+.++.+|            
T Consensus        13 lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D   92 (315)
T 2o2s_A           13 FVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVPQD   92 (315)
T ss_dssp             EEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSSCHH
T ss_pred             EEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchhhhh
Confidence            69999  8999999999999999999999986421      00 0111121111111   12344443            


Q ss_pred             CCC--------hHHHHHHHHHHHhcCCCcceEEEccccCC----CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhh
Q 023054           57 LSS--------IASIKDFAQNFIALNLPLNILINNAGIMF----CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTA  124 (288)
Q Consensus        57 l~~--------~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  124 (288)
                      ++|        .++++++++++.+.++++|+||||||+..    +..+.+.++|++.+++|+.++++++++++|+|.+  
T Consensus        93 v~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--  170 (315)
T 2o2s_A           93 IKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE--  170 (315)
T ss_dssp             HHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE--
T ss_pred             hhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc--
Confidence            343        66899999999998999999999999753    2346778899999999999999999999999854  


Q ss_pred             ccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCcc-ccchhhHHHHHHHHHHHHHHhcc-cCCceEEEEeeCCccc
Q 023054          125 KETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK-KAYGQSKLANILHANELSRRFQE-EGVNITANSVHPGLIM  202 (288)
Q Consensus       125 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~-~~~~i~v~~v~PG~v~  202 (288)
                           .|+||++||..+..+               .++. ..|++||+|+.+|+++++.++++ +|  |+||+|+||+++
T Consensus       171 -----~g~Iv~isS~~~~~~---------------~~~~~~~Y~asKaal~~l~~~la~el~~~~g--Irvn~v~PG~v~  228 (315)
T 2o2s_A          171 -----GGSAVTLSYLAAERV---------------VPGYGGGMSSAKAALESDTRTLAWEAGQKYG--VRVNAISAGPLK  228 (315)
T ss_dssp             -----EEEEEEEEEGGGTSC---------------CTTCCTTHHHHHHHHHHHHHHHHHHHHHHTC--CEEEEEEECCCC
T ss_pred             -----CCEEEEEeccccccc---------------CCCccHHHHHHHHHHHHHHHHHHHHhCcccC--eEEEEEeccccc
Confidence                 379999999987653               4444 48999999999999999999985 78  999999999999


Q ss_pred             CCCCCCCh------HHHH----HHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          203 TNLFKHSA------VVMR----FLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       203 t~~~~~~~------~~~~----~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |++.....      ....    +....+..+..+|+|+|+.++||++ +...++||++|. |+|+.
T Consensus       229 T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          229 SRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLS-PLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             CHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             chhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhC-chhccCcCCEEEECCCee
Confidence            99754221      1111    1223355667899999999999997 788999999887 56643

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=5.1e-37  Score=253.01  Aligned_cols=201  Identities=20%  Similarity=0.215  Sum_probs=172.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+                      +|++|+++++++++++    +++|+|
T Consensus        10 lVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~----g~id~l   63 (223)
T 3uce_A           10 VVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI----GAFDHL   63 (223)
T ss_dssp             EEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH----CSEEEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh----CCCCEE
Confidence            69999999999999999999999999999864                      8999999999998865    789999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.++++++++++|+|.+       .|+||++||..+..+             
T Consensus        64 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~-------------  123 (223)
T 3uce_A           64 IVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-------GGSITLTSGMLSRKV-------------  123 (223)
T ss_dssp             EECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-------EEEEEEECCGGGTSC-------------
T ss_pred             EECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC-------CeEEEEecchhhccC-------------
Confidence            999998632   346778899999999999999999999999865       479999999988763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH------HHHHHHHHhhhcCChHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV------MRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~a  231 (288)
                        .++...|++||++++.|+++++.++++    |+||+|+||+++|++.......      .......+..++.+|+|+|
T Consensus       124 --~~~~~~Y~asK~a~~~~~~~la~e~~~----i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA  197 (223)
T 3uce_A          124 --VANTYVKAAINAAIEATTKVLAKELAP----IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIA  197 (223)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHTT----SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHhhcC----cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHH
Confidence              667789999999999999999999986    9999999999999998765221      1223344666778999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCcc
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.++|+++   ..++||+.|. ++|.
T Consensus       198 ~~~~~l~~---~~~~tG~~i~vdgG~  220 (223)
T 3uce_A          198 MAYLFAIQ---NSYMTGTVIDVDGGA  220 (223)
T ss_dssp             HHHHHHHH---CTTCCSCEEEESTTG
T ss_pred             HHHHHHcc---CCCCCCcEEEecCCe
Confidence            99999996   3789999887 5543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-36  Score=257.25  Aligned_cols=228  Identities=20%  Similarity=0.239  Sum_probs=189.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|+++|++|++++| +.+.+++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus        25 lItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~  102 (274)
T 1ja9_A           25 LTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVSHFGGLDF  102 (274)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999 887777777777654  467899999999999999999999998999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+....  .+.+.+++++.+++|+.++++++++++|.|.+       +++||++||..+...             
T Consensus       103 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~-------------  162 (274)
T 1ja9_A          103 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMT-------------  162 (274)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCC-------------
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCEEEEEcChHhccC-------------
Confidence            99999986532  35677889999999999999999999999862       379999999987621             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCC------------CCh---HHHHHHHHHHhh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFK------------HSA---VVMRFLKFFSFF  222 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~------------~~~---~~~~~~~~~~~~  222 (288)
                       +.++...|+++|++++.+++.++.+++..+  |++++|+||++.|++..            ...   ....+....+..
T Consensus       163 -~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (274)
T 1ja9_A          163 -GIPNHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK  239 (274)
T ss_dssp             -SCCSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCC
Confidence             245678899999999999999999999998  99999999999998754            111   111111222445


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      .+.+|+|+|+.++++++ +...+++|+.|..+
T Consensus       240 ~~~~~~dva~~i~~l~~-~~~~~~~G~~~~v~  270 (274)
T 1ja9_A          240 RIGYPADIGRAVSALCQ-EESEWINGQVIKLT  270 (274)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEES
T ss_pred             CccCHHHHHHHHHHHhC-cccccccCcEEEec
Confidence            56799999999999997 66788999987743

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=7e-35  Score=252.89  Aligned_cols=183  Identities=21%  Similarity=0.249  Sum_probs=157.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-----MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||++|||+++|+.|+++|++|++++|+     .+.++++.+.+...  +.++.++.+|++|.++++++++++.+.++
T Consensus         9 lVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g   86 (324)
T 3u9l_A            9 LITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAIDQIIGEDG   86 (324)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            699999999999999999999999987765     56666666665554  46799999999999999999999999999


Q ss_pred             CcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           76 PLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        76 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      ++|+||||||+...  ..+.+.++|++.+++|+.|++.++++++|+|++++     .|+||++||..+...         
T Consensus        87 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-----~g~iV~isS~~~~~~---------  152 (324)
T 3u9l_A           87 RIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-----HGLLIWISSSSSAGG---------  152 (324)
T ss_dssp             CCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC---------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEecchhccC---------
Confidence            99999999998653  34678889999999999999999999999998876     689999999987642         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCC
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLF  206 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~  206 (288)
                           ..+....|++||+|+++|+++++.|+++.|  |+||+|+||++.|++.
T Consensus       153 -----~~~~~~~Y~asKaa~~~~~~~la~el~~~g--I~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          153 -----TPPYLAPYFAAKAAMDAIAVQYARELSRWG--IETSIIVPGAFTSGTN  198 (324)
T ss_dssp             -----CCSSCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCC-----
T ss_pred             -----CCCcchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEECCccccCch
Confidence                 234567899999999999999999999999  9999999999997764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=2.6e-36  Score=256.07  Aligned_cols=232  Identities=27%  Similarity=0.393  Sum_probs=188.3

Q ss_pred             CcccCCChhHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLAL-RKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||++++++|++ +|++|++++|+.+..++..+++...  +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         8 lITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   85 (276)
T 1wma_A            8 LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDV   85 (276)
T ss_dssp             EESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6999999999999999999 9999999999999888888887665  457899999999999999999999998899999


Q ss_pred             EEEccccCCCCC-CCC-CCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC----------
Q 023054           80 LINNAGIMFCPY-QIS-EDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG----------  147 (288)
Q Consensus        80 lv~~ag~~~~~~-~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~----------  147 (288)
                      ||||||+..... ..+ .++++..+++|+.+++.++++++|.|.+       .++||++||..+..+...          
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~~~~~~~~  158 (276)
T 1wma_A           86 LVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQKFR  158 (276)
T ss_dssp             EEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             EEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-------CCEEEEECChhhhcccccCChhHHhhcc
Confidence            999999865432 222 3678999999999999999999998854       369999999887643110          


Q ss_pred             --Ccccc---------------CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcc----cCCceEEEEeeCCcccCCCC
Q 023054          148 --GIRFQ---------------KINDRAGYSDKKAYGQSKLANILHANELSRRFQE----EGVNITANSVHPGLIMTNLF  206 (288)
Q Consensus       148 --~~~~~---------------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~----~~~~i~v~~v~PG~v~t~~~  206 (288)
                        .+...               ......+++ ...|++||++++.|++.++++++.    .+  |+||+|+||++.|++.
T Consensus       159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~--i~v~~v~PG~v~t~~~  235 (276)
T 1wma_A          159 SETITEEELVGLMNKFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKGDK--ILLNACCPGWVRTDMA  235 (276)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHHHHCTTSC--CEEEEEECCSBCSTTT
T ss_pred             ccccchhhhhhhhhhhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhhcccCCCc--eEEEEecCCccccCcC
Confidence              00000               000011222 378999999999999999999988    67  9999999999999987


Q ss_pred             CCChHHHHHHHHHHhhhcCChHHHHHHHHHHhcCCC-ccCCCceeeccCccC
Q 023054          207 KHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALHPN-LKGVTGKYFLDCNEM  257 (288)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~-~~~~tG~~~~~~~~~  257 (288)
                      ..             ..+.+|+++|+.++|+++.+. ..+++|++|.+++..
T Consensus       236 ~~-------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~~~  274 (276)
T 1wma_A          236 GP-------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVE  274 (276)
T ss_dssp             CT-------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEE
T ss_pred             Cc-------------cccCChhHhhhhHhhhhcCcccccccCceEeccCcee
Confidence            64             134799999999999997553 479999999876654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.3e-36  Score=255.37  Aligned_cols=224  Identities=23%  Similarity=0.276  Sum_probs=179.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-HHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-ASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++|||+++|++|+++|++ |++++|+.+.  +..+++....++.++.++.+|++|. ++++++++++.+.++++|
T Consensus         9 lVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id   86 (254)
T 1sby_A            9 IFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD   86 (254)
T ss_dssp             EEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCCC
Confidence            69999999999999999999996 9999998642  2233444444456789999999998 999999999999889999


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||||||+.      +.+++++.+++|+.+++.++++++|.|.++..  ...|+||++||..+..+              
T Consensus        87 ~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~--------------  144 (254)
T 1sby_A           87 ILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG--GPGGIIANICSVTGFNA--------------  144 (254)
T ss_dssp             EEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTSC--------------
T ss_pred             EEEECCccC------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcC--CCCCEEEEECchhhccC--------------
Confidence            999999974      45789999999999999999999999976421  11379999999988753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|++||++++.|+++++.++...|  |+||+|+||+++|++......    ..............+|+|+|+.+
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i  221 (254)
T 1sby_A          145 -IHQVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNF  221 (254)
T ss_dssp             -CTTSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHH
Confidence             55678999999999999999999998888  999999999999998643210    01111122222345899999999


Q ss_pred             HHHhcCCCccCCCceeec-cCc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +++++    .+++|+.+. ++|
T Consensus       222 ~~~~~----~~~~G~~~~v~gG  239 (254)
T 1sby_A          222 VKAIE----ANKNGAIWKLDLG  239 (254)
T ss_dssp             HHHHH----HCCTTCEEEEETT
T ss_pred             HHHHH----cCCCCCEEEEeCC
Confidence            99995    578899776 555

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-36  Score=250.39  Aligned_cols=226  Identities=23%  Similarity=0.275  Sum_probs=176.5

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC--C
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL--P   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~   76 (288)
                      |||||++|||++++++|+++|  ++|++++|+.+.++++.+    . .+.++.++.+|++|.++++++++++.+.++  +
T Consensus         7 lItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            7 VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             EESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             EEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            699999999999999999999  999999999877654422    1 256799999999999999999999998887  8


Q ss_pred             cceEEEccccCC-C--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHh------hccCCCCCeEEEEcCccccccccC
Q 023054           77 LNILINNAGIMF-C--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT------AKETGIEGRIVNLSSIAHQYTYKG  147 (288)
Q Consensus        77 id~lv~~ag~~~-~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~~~~g~iv~vsS~~~~~~~~~  147 (288)
                      +|+||||||+.. .  ..+.+.+++++.+++|+.+++.++++++|.|.++      +......++||++||..+..+.+.
T Consensus        82 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  161 (250)
T 1yo6_A           82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT  161 (250)
T ss_dssp             CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred             CcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc
Confidence            999999999875 2  2355678899999999999999999999999775      100011479999999987654211


Q ss_pred             CccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCCh
Q 023054          148 GIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (288)
                      .        ....++...|++||++++.++++++.+++..+  |+|++|+||+++|++....             ...+|
T Consensus       162 ~--------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~-------------~~~~~  218 (250)
T 1yo6_A          162 S--------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKN-------------AALTV  218 (250)
T ss_dssp             S--------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC--------------------------
T ss_pred             c--------ccccCCccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEcCCceecCCCCCC-------------CCCCH
Confidence            0        00114667899999999999999999999988  9999999999999986531             23589


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeeccCc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      +++|+.++++++ +...+++|+++..++
T Consensus       219 ~~~a~~~~~~~~-~~~~~~~G~~~~~~g  245 (250)
T 1yo6_A          219 EQSTAELISSFN-KLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHHHHT-TCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHHHh-cccccCCCeEEEECC
Confidence            999999999997 566789999987433

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.8e-37  Score=269.07  Aligned_cols=232  Identities=16%  Similarity=0.108  Sum_probs=153.0

Q ss_pred             CcccC--CChhHHHHHHHHHHCCCEEEEEeCCh-----------HHHH-----------HHHHHHHhhCCC-CceEEEEe
Q 023054            1 MLAGG--ASGIGLETARVLALRKAHVIIAARNM-----------AAAN-----------EARQLILKEDDT-ARVDTLKL   55 (288)
Q Consensus         1 lItGa--s~gIG~~ia~~La~~G~~V~~~~r~~-----------~~~~-----------~~~~~~~~~~~~-~~~~~~~~   55 (288)
                      |||||  ++|||+++|+.|+++|++|++++|++           +.++           ++.+++...+.. ....++.+
T Consensus        13 lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (319)
T 2ptg_A           13 FVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPL   92 (319)
T ss_dssp             EEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEEEC
T ss_pred             EEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccccc
Confidence            69999  89999999999999999999998753           1111           122223222100 01234443


Q ss_pred             c------------CCC--------hHHHHHHHHHHHhcCCCcceEEEccccCC----CCCCCCCCcchhhhhhhhhHHHH
Q 023054           56 D------------LSS--------IASIKDFAQNFIALNLPLNILINNAGIMF----CPYQISEDGIEMQFATNHIGHFL  111 (288)
Q Consensus        56 D------------l~~--------~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~  111 (288)
                      |            ++|        .++++++++++.+.++++|+||||||+..    +..+.+.++|++.+++|+.++++
T Consensus        93 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~  172 (319)
T 2ptg_A           93 DAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVS  172 (319)
T ss_dssp             CTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHH
Confidence            3            333        45899999999998999999999999753    23467788999999999999999


Q ss_pred             HHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCcc-ccchhhHHHHHHHHHHHHHHhcc-cCC
Q 023054          112 LTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK-KAYGQSKLANILHANELSRRFQE-EGV  189 (288)
Q Consensus       112 l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~-~~~  189 (288)
                      ++++++|+|.+       .|+||++||..+..+               .++. ..|++||+|+.+|+++++.++++ +| 
T Consensus       173 l~~~~~~~m~~-------~g~Iv~isS~~~~~~---------------~~~~~~~Y~asKaal~~l~~~la~el~~~~g-  229 (319)
T 2ptg_A          173 LLQHFLPLMKE-------GGSALALSYIASEKV---------------IPGYGGGMSSAKAALESDCRTLAFEAGRARA-  229 (319)
T ss_dssp             HHHHHGGGEEE-------EEEEEEEEECC---------------------------------THHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHhc-------CceEEEEeccccccc---------------cCccchhhHHHHHHHHHHHHHHHHHhccccC-
Confidence            99999999954       379999999987653               4454 58999999999999999999985 78 


Q ss_pred             ceEEEEeeCCcccCCCCCCChH------HH----HHHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          190 NITANSVHPGLIMTNLFKHSAV------VM----RFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       190 ~i~v~~v~PG~v~t~~~~~~~~------~~----~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                       |+||+|+||+++|+|......      ..    .+....+..++.+|+|+|+.++||++ +.+.++||+.|. |+|+.
T Consensus       230 -Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s-~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          230 -VRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLS-PLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             -CEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTCT
T ss_pred             -eeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhC-cccCCccCCEEEECCCce
Confidence             999999999999998754310      00    01123456677899999999999997 788999999887 55544

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=2.2e-36  Score=268.10  Aligned_cols=250  Identities=12%  Similarity=-0.007  Sum_probs=196.8

Q ss_pred             CcccCCChhHHH--HHHHHHHCCCEEEEEeCChHH------------HHHHHHHHHhhCCCCceEEEEecCCChHHHHHH
Q 023054            1 MLAGGASGIGLE--TARVLALRKAHVIIAARNMAA------------ANEARQLILKEDDTARVDTLKLDLSSIASIKDF   66 (288)
Q Consensus         1 lItGas~gIG~~--ia~~La~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   66 (288)
                      |||||++|||++  +++.|+++|++|++++|+...            .+.+.+.+...  +.++.++.+|++|.++++++
T Consensus        64 LVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~~~v~~~  141 (418)
T 4eue_A           64 LIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSNETKDKV  141 (418)
T ss_dssp             EEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHH
T ss_pred             EEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCHHHHHHH
Confidence            699999999999  999999999999999986533            23333333333  56789999999999999999


Q ss_pred             HHHHHhcCCCcceEEEccccC---------------CCC---------------------CCCCCCcchhhhhhhhhHHH
Q 023054           67 AQNFIALNLPLNILINNAGIM---------------FCP---------------------YQISEDGIEMQFATNHIGHF  110 (288)
Q Consensus        67 ~~~~~~~~~~id~lv~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~n~~~~~  110 (288)
                      ++.+.+.+++||+||||||..               .+.                     .+.+.++|+.++++|..+.+
T Consensus       142 v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~  221 (418)
T 4eue_A          142 IKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDW  221 (418)
T ss_dssp             HHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHH
Confidence            999999999999999999974               111                     13467889999999999888


Q ss_pred             -HHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCcc--ccchhhHHHHHHHHHHHHHHhcc-
Q 023054          111 -LLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK--KAYGQSKLANILHANELSRRFQE-  186 (288)
Q Consensus       111 -~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~~~~~-  186 (288)
                       .+++.+.+.+....     +|+||++||+.+..+               .+..  .+|++||+|+.+|+++|+.|+++ 
T Consensus       222 ~~~~~~l~~~~~~~~-----gg~IV~iSSi~~~~~---------------~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~  281 (418)
T 4eue_A          222 QEWCEELLYEDCFSD-----KATTIAYSYIGSPRT---------------YKIYREGTIGIAKKDLEDKAKLINEKLNRV  281 (418)
T ss_dssp             HHHHHHHHHTTCEEE-----EEEEEEEECCCCGGG---------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcC-----CcEEEEEeCchhcCC---------------CCccccHHHHHHHHHHHHHHHHHHHHhCCc
Confidence             77777766543332     589999999987763               5555  88999999999999999999999 


Q ss_pred             cCCceEEEEeeCCcccCCCCCCChHHHH--HHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-c-CccCCCCcc
Q 023054          187 EGVNITANSVHPGLIMTNLFKHSAVVMR--FLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-D-CNEMPPSAL  262 (288)
Q Consensus       187 ~~~~i~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~-~~~~~~~~~  262 (288)
                      .|  |+||+|+||++.|++....+....  .....+.....+||++++.+.||++ +  ...+|..+. | ++....+++
T Consensus       282 ~G--IrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~s-d--~~~~g~~~~~D~~~~~r~d~~  356 (418)
T 4eue_A          282 IG--GRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFS-E--KIYSNEKIQFDDKGRLRMDDL  356 (418)
T ss_dssp             HS--CEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH-H--TTSSSSCCCCCTTSCEESCTT
T ss_pred             cC--eEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhh-c--cccCCCccccCCCceeeCChh
Confidence            99  999999999999998776532221  1111244566899999999999997 3  566788744 4 567888999


Q ss_pred             ccCHHHHHHHHHHHH
Q 023054          263 ARDETLAKKLWDFSN  277 (288)
Q Consensus       263 ~~~~~~~~~~~~~~~  277 (288)
                      .+++++|+++-+.-+
T Consensus       357 e~~~~~q~~~~~~~~  371 (418)
T 4eue_A          357 ELRKDVQDEVDRIWS  371 (418)
T ss_dssp             TTCHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHH
Confidence            999999975444333

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2.8e-36  Score=262.19  Aligned_cols=227  Identities=20%  Similarity=0.247  Sum_probs=174.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh----hCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILK----EDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||++|||+++|++|+++|++|++++|+....++..+.+..    ..++.++.++.+|++|.++++++++++.  +++
T Consensus         6 lVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~--~g~   83 (327)
T 1jtv_A            6 LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--EGR   83 (327)
T ss_dssp             EESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT--TSC
T ss_pred             EEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh--cCC
Confidence            6999999999999999999999998888765443333333322    1224578999999999999999998873  478


Q ss_pred             cceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           77 LNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        77 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      +|+||||||+...  ..+.+.++|++++++|+.+++.++++++|+|.+++     .++||++||..+..+          
T Consensus        84 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-----~g~IV~isS~~~~~~----------  148 (327)
T 1jtv_A           84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-----SGRVLVTGSVGGLMG----------  148 (327)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEEEEGGGTSC----------
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEECCcccccC----------
Confidence            9999999998643  33567789999999999999999999999998765     689999999988763          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH------------HHH-HHHHH--
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV------------VMR-FLKFF--  219 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~------------~~~-~~~~~--  219 (288)
                           .+....|++||++++.|++.++.+++..|  |+||+|+||+++|+|......            ... +....  
T Consensus       149 -----~~~~~~Y~aSK~a~~~~~~~la~el~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (327)
T 1jtv_A          149 -----LPFNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAH  221 (327)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHH
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHH
Confidence                 55678999999999999999999999999  999999999999999754310            000 00111  


Q ss_pred             ---Hhhh-cCChHHHHHHHHHHhcCC--CccCCCceee
Q 023054          220 ---SFFL-WKNVPQGAATTCYVALHP--NLKGVTGKYF  251 (288)
Q Consensus       220 ---~~~~-~~~~~~~a~~~~~l~~~~--~~~~~tG~~~  251 (288)
                         +..+ ..+|+++|+.++++++.+  ...+++|..+
T Consensus       222 ~~~~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          222 SKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHhhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeCchH
Confidence               1122 358999999999999753  3456677543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=1.4e-36  Score=284.04  Aligned_cols=242  Identities=21%  Similarity=0.197  Sum_probs=181.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR---------NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFI   71 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (288)
                      |||||++|||+++|+.|+++|++|++++|         +.+.++++.+++...+  ..   ..+|++|.++++++++++.
T Consensus        23 lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~--~~---~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           23 VVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG--GE---AVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT--CC---EEECCCCGGGHHHHHC---
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC--Ce---EEEEeCCHHHHHHHHHHHH
Confidence            69999999999999999999999999988         6677777788776653  22   2489999999999999999


Q ss_pred             hcCCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc
Q 023054           72 ALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI  149 (288)
Q Consensus        72 ~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  149 (288)
                      +.++++|+||||||+...  ..+.+.++|+.++++|+.++++++++++|+|++++     .|+||++||.++..+     
T Consensus        98 ~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-----~g~IV~isS~a~~~~-----  167 (613)
T 3oml_A           98 KAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-----YGRIIMTSSNSGIYG-----  167 (613)
T ss_dssp             -------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----CEEEEEECCHHHHHC-----
T ss_pred             HHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEECCHHHcCC-----
Confidence            999999999999998754  23678899999999999999999999999998865     689999999998874     


Q ss_pred             cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHH
Q 023054          150 RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       150 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (288)
                                .++...|++||+|+.+|+++++.|+++.|  |+||+|+||++ |+|.......       ......+|++
T Consensus       168 ----------~~~~~~Y~asKaal~~lt~~la~e~~~~g--I~vn~v~Pg~~-t~~~~~~~~~-------~~~~~~~ped  227 (613)
T 3oml_A          168 ----------NFGQVNYTAAKMGLIGLANTVAIEGARNN--VLCNVIVPTAA-SRMTEGILPD-------ILFNELKPKL  227 (613)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-------CCCCCH-------HHHTTCCGGG
T ss_pred             ----------CCCChHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEECCCC-Chhhhhccch-------hhhhcCCHHH
Confidence                      56778999999999999999999999999  99999999985 6665543111       1123358999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCccCC--------CC------ccccCHHHHHHHHHHHHHH
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNEMP--------PS------ALARDETLAKKLWDFSNKM  279 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~--------~~------~~~~~~~~~~~~~~~~~~~  279 (288)
                      +|..++||++ +. .++||++|. ++|+..        ..      ......+...+.|+.+.++
T Consensus       228 vA~~v~~L~s-~~-~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~  290 (613)
T 3oml_A          228 IAPVVAYLCH-ES-CEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDM  290 (613)
T ss_dssp             THHHHHHTTS-TT-CCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCC
T ss_pred             HHHHHHHhcC-CC-cCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhcc
Confidence            9999999997 55 899999887 444321        10      1234677888888776544

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-35  Score=247.13  Aligned_cols=224  Identities=18%  Similarity=0.295  Sum_probs=182.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+..++..+++      ..+.++.+|++|.++++++++    .++++|+|
T Consensus        11 lVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~----~~~~id~v   80 (244)
T 1cyd_A           11 LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG----GIGPVDLL   80 (244)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----TCCCCSEE
T ss_pred             EEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCCcEEecCCCHHHHHHHHH----HcCCCCEE
Confidence            69999999999999999999999999999988776654432      235677999999999988876    46789999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.+++++.+++|+.+++.++++++|.|.+++.    .++||++||..+..+              
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~~~iv~~sS~~~~~~--------------  142 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV----PGSIVNVSSMVAHVT--------------  142 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSC--------------
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC----CeEEEEEcchhhcCC--------------
Confidence            999998653  235677889999999999999999999999987531    379999999987653              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---h-HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---A-VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~-~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .++...|++||++++.+++.++.+++..+  |++++|+||++.|++....   + ....+....+...+.+|+|+|+.+
T Consensus       143 -~~~~~~Y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  219 (244)
T 1cyd_A          143 -FPNLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSI  219 (244)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHH
Confidence             55678899999999999999999999988  9999999999999875421   1 112222333445667999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCcc
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +++++ +...+++|+.|. ++|+
T Consensus       220 ~~l~~-~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          220 LFLLS-DRSASTSGGGILVDAGY  241 (244)
T ss_dssp             HHHHS-GGGTTCCSSEEEESTTG
T ss_pred             HHHhC-chhhcccCCEEEECCCc
Confidence            99997 677889999876 5554

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=8.3e-37  Score=256.20  Aligned_cols=210  Identities=15%  Similarity=0.128  Sum_probs=179.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+..+              -..+.+|++|.++++++++++.+.++++|+|
T Consensus        26 lITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~l   91 (251)
T 3orf_A           26 LVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTF   91 (251)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999875321              2357899999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.+++++.+++|+.+++.++++++|.|.+       .|+||++||..+..+             
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~-------------  151 (251)
T 3orf_A           92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-------GGLFVLTGASAALNR-------------  151 (251)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSC-------------
T ss_pred             EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-------CCEEEEEechhhccC-------------
Confidence            999998654   235567889999999999999999999999855       479999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhc--ccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQ--EEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++...|++||+|++.|+++++.+++  +.+  |+||+|+||+++|++....      ....+...+.+|+|+|+.++
T Consensus       152 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~dva~~i~  221 (251)
T 3orf_A          152 --TSGMIAYGATKAATHHIIKDLASENGGLPAG--STSLGILPVTLDTPTNRKY------MSDANFDDWTPLSEVAEKLF  221 (251)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTT--CEEEEEEESCBCCHHHHHH------CTTSCGGGSBCHHHHHHHHH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhcccCCC--cEEEEEecCcCcCcchhhh------cccccccccCCHHHHHHHHH
Confidence              66778999999999999999999987  777  9999999999999875321      11123455679999999999


Q ss_pred             HHhcCCCccCCCceeeccC
Q 023054          236 YVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~~  254 (288)
                      ++++.+...+++|+.|...
T Consensus       222 ~l~~~~~~~~~tG~~i~v~  240 (251)
T 3orf_A          222 EWSTNSDSRPTNGSLVKFE  240 (251)
T ss_dssp             HHHHCGGGCCCTTCEEEEE
T ss_pred             HHhcCccccCCcceEEEEe
Confidence            9998438899999988743

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.4e-37  Score=264.81  Aligned_cols=232  Identities=16%  Similarity=0.110  Sum_probs=177.2

Q ss_pred             CcccCC--ChhHHHHHHHHHHCCCEEEEEeCChHHHH-------HHHHHHHhhCCC---CceEEEEec--------CC--
Q 023054            1 MLAGGA--SGIGLETARVLALRKAHVIIAARNMAAAN-------EARQLILKEDDT---ARVDTLKLD--------LS--   58 (288)
Q Consensus         1 lItGas--~gIG~~ia~~La~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~---~~~~~~~~D--------l~--   58 (288)
                      |||||+  +|||+++|+.|+++|++|++++|++....       +..+++.....+   .....+.+|        ++  
T Consensus        12 lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~D   91 (297)
T 1d7o_A           12 FIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVPED   91 (297)
T ss_dssp             EEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSCHH
T ss_pred             EEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhhhhhh
Confidence            699999  99999999999999999999998642210       000111110001   112334443        32  


Q ss_pred             --C--------hHHHHHHHHHHHhcCCCcceEEEccccCC----CCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhh
Q 023054           59 --S--------IASIKDFAQNFIALNLPLNILINNAGIMF----CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTA  124 (288)
Q Consensus        59 --~--------~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  124 (288)
                        |        .++++++++++.+.++++|+||||||+..    +..+.+.++|++.+++|+.++++++++++|+|.+  
T Consensus        92 v~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--  169 (297)
T 1d7o_A           92 VKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP--  169 (297)
T ss_dssp             HHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--
T ss_pred             hhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc--
Confidence              2        66899999999998999999999999743    2346778899999999999999999999999854  


Q ss_pred             ccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCcc-ccchhhHHHHHHHHHHHHHHhcc-cCCceEEEEeeCCccc
Q 023054          125 KETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK-KAYGQSKLANILHANELSRRFQE-EGVNITANSVHPGLIM  202 (288)
Q Consensus       125 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~-~~~~i~v~~v~PG~v~  202 (288)
                           .|+||++||..+..+               .++. ..|++||+|+++|+++++.++++ +|  |+||+|+||+++
T Consensus       170 -----~g~iv~isS~~~~~~---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~g--i~vn~v~PG~v~  227 (297)
T 1d7o_A          170 -----GGASISLTYIASERI---------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQN--IRVNTISAGPLG  227 (297)
T ss_dssp             -----EEEEEEEECGGGTSC---------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCCB
T ss_pred             -----CceEEEEeccccccC---------------CCCcchHHHHHHHHHHHHHHHHHHHhCcccC--cEEEEEeccccc
Confidence                 379999999987653               4454 58999999999999999999985 78  999999999999


Q ss_pred             CCCCCCChHHHH----HHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          203 TNLFKHSAVVMR----FLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       203 t~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |++.........    .....+..++.+|+|+|+.++||++ +...++||++|. ++|+.
T Consensus       228 T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          228 SRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVS-PLASAITGATIYVDNGLN  286 (297)
T ss_dssp             CCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             cchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCce
Confidence            999775422122    2222344567799999999999997 778999999887 55543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=2.5e-37  Score=257.81  Aligned_cols=212  Identities=14%  Similarity=0.071  Sum_probs=178.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC--CCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN--LPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~id   78 (288)
                      |||||++|||++++++|+++|++|++++|+.+..+            ....++.+|++|.++++++++++.+.+  +++|
T Consensus        11 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A           11 LVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             EEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             EEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            69999999999999999999999999999875421            235778899999999999999999888  7999


Q ss_pred             eEEEccccCCC--C-CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFC--P-YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||+...  . .+.+.++|++.+++|+.+++.++++++|.|.+       +|+||++||..+..+           
T Consensus        79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~-----------  140 (241)
T 1dhr_A           79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALDG-----------  140 (241)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSC-----------
T ss_pred             EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCEEEEECCHHHccC-----------
Confidence            99999998643  2 34566889999999999999999999999854       379999999988763           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhc--ccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQ--EEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                          .++...|++||++++.|+++++.+++  +.|  |+||+|+||+++|++.......      .......+|+|+|+.
T Consensus       141 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~vA~~  208 (241)
T 1dhr_A          141 ----TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNRKSMPE------ADFSSWTPLEFLVET  208 (241)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHHHHSTT------SCGGGSEEHHHHHHH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhccCCCC--eEEEEEecCcccCccccccCcc------hhhccCCCHHHHHHH
Confidence                56778999999999999999999999  788  9999999999999875421000      011234578999999


Q ss_pred             HHHHhcCCCccCCCceeeccCc
Q 023054          234 TCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      ++++++ +...+++|+++..++
T Consensus       209 v~~l~~-~~~~~~~G~~~~v~g  229 (241)
T 1dhr_A          209 FHDWIT-GNKRPNSGSLIQVVT  229 (241)
T ss_dssp             HHHHHT-TTTCCCTTCEEEEEE
T ss_pred             HHHHhc-CCCcCccceEEEEeC
Confidence            999997 788999999887433

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-35  Score=250.10  Aligned_cols=208  Identities=24%  Similarity=0.283  Sum_probs=180.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus        35 lITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l  112 (272)
T 1yb1_A           35 LITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSIL  112 (272)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEE
Confidence            69999999999999999999999999999999888888877665  4579999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.+++++.+++|+.+++.+++.++|.|.+++     .++||++||..+..+              
T Consensus       113 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~--------------  173 (272)
T 1yb1_A          113 VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-----HGHIVTVASAAGHVS--------------  173 (272)
T ss_dssp             EECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCCC-CCC--------------
T ss_pred             EECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEEechhhcCC--------------
Confidence            9999986542  3456678999999999999999999999998765     589999999987652              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhc---ccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQ---EEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~---~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                       .++...|++||++++.+++.++.++.   ..|  |+||+|+||+++|++....        ..+...+.+|+++|+.++
T Consensus       174 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~g--i~v~~v~Pg~v~t~~~~~~--------~~~~~~~~~~~dva~~i~  242 (272)
T 1yb1_A          174 -VPFLLAYCSSKFAAVGFHKTLTDELAALQITG--VKTTCLCPNFVNTGFIKNP--------STSLGPTLEPEEVVNRLM  242 (272)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEEETHHHHCSTTCT--------HHHHCCCCCHHHHHHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCcccCCccccc--------cccccCCCCHHHHHHHHH
Confidence             45668899999999999999999997   556  9999999999999996532        123345679999999999


Q ss_pred             HHhcC
Q 023054          236 YVALH  240 (288)
Q Consensus       236 ~l~~~  240 (288)
                      +++..
T Consensus       243 ~~~~~  247 (272)
T 1yb1_A          243 HGILT  247 (272)
T ss_dssp             HHHHT
T ss_pred             HHHHc
Confidence            99973

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.4e-36  Score=253.85  Aligned_cols=220  Identities=16%  Similarity=0.118  Sum_probs=157.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|++ |++|++++|+.+.+++..+       ..++.++.+|+++..+ .+.+.+..+.++++|+|
T Consensus         9 lITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A            9 VVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             EEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGTTCSCCSEE
T ss_pred             EEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHHhcCCCCEE
Confidence            6999999999999999998 9999999999887765543       2358899999998876 44444445567899999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.+++.+++.++|.|.++      +|+||++||..+..+              
T Consensus        80 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~--------------  139 (245)
T 3e9n_A           80 VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA------SGCVIYINSGAGNGP--------------  139 (245)
T ss_dssp             EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEC---------------------
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCeEEEEcCcccccC--------------
Confidence            9999987542  355778899999999999999999999999775      489999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|++||+|++.|+++++.+++..|  |+||+|+||++.|++.....  .......+...+.+|+|+|+.++|++
T Consensus       140 -~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~p~dvA~~i~~l~  214 (245)
T 3e9n_A          140 -HPGNTIYAASKHALRGLADAFRKEEANNG--IRVSTVSPGPTNTPMLQGLM--DSQGTNFRPEIYIEPKEIANAIRFVI  214 (245)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC------------------CCGGGSCHHHHHHHHHHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCccCchhhhhh--hhhhcccccccCCCHHHHHHHHHHHH
Confidence             56778999999999999999999999999  99999999999999977542  22223345566789999999999999


Q ss_pred             cCCCccCCCceeeccC
Q 023054          239 LHPNLKGVTGKYFLDC  254 (288)
Q Consensus       239 ~~~~~~~~tG~~~~~~  254 (288)
                      +.+....+.+..+.+.
T Consensus       215 ~~~~~~~~~~i~~~p~  230 (245)
T 3e9n_A          215 DAGETTQITNVDVRPR  230 (245)
T ss_dssp             TSCTTEEEEEEEEEEC
T ss_pred             cCCCccceeeeEEEec
Confidence            7544433333344343

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-35  Score=248.10  Aligned_cols=225  Identities=23%  Similarity=0.269  Sum_probs=186.0

Q ss_pred             CcccCCChhHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC--
Q 023054            1 MLAGGASGIGLETARVLALRK---AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL--   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--   75 (288)
                      |||||++|||++++++|+++|   ++|++++|+.+..+.+ .++...  +.++.++.+|++|.++++++++++.+.++  
T Consensus        25 lITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~  101 (267)
T 1sny_A           25 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDKLVADIEGVTKDQ  101 (267)
T ss_dssp             EESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             EEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence            699999999999999999999   9999999998765543 334333  35799999999999999999999998887  


Q ss_pred             CcceEEEccccCC-C--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC------CCCCeEEEEcCcccccccc
Q 023054           76 PLNILINNAGIMF-C--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET------GIEGRIVNLSSIAHQYTYK  146 (288)
Q Consensus        76 ~id~lv~~ag~~~-~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~------~~~g~iv~vsS~~~~~~~~  146 (288)
                      ++|+||||||+.. .  ..+.+.+++++.+++|+.+++.++++++|.|.++....      ...++||++||..+..+.+
T Consensus       102 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  181 (267)
T 1sny_A          102 GLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN  181 (267)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC
T ss_pred             CccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCC
Confidence            8999999999875 2  23567788999999999999999999999998752110      0147999999998765311


Q ss_pred             CCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCC
Q 023054          147 GGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKN  226 (288)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  226 (288)
                                  ..++...|++||++++.|++.++.+++..+  |+|++|+||+++|++....             ...+
T Consensus       182 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~-------------~~~~  234 (267)
T 1sny_A          182 ------------TDGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSS-------------APLD  234 (267)
T ss_dssp             ------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCTT-------------CSBC
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHhhcCC--cEEEEeCCcceecCCCCCC-------------CCCC
Confidence                        123567899999999999999999999998  9999999999999997532             2368


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+++|+.++++++ .....++|.+|. +++.
T Consensus       235 ~~~~a~~~~~~~~-~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          235 VPTSTGQIVQTIS-KLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHHHHHHH-HCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHHHHHH-hcCcCCCCcEEccCCcC
Confidence            9999999999997 567789999987 4443

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-36  Score=252.76  Aligned_cols=213  Identities=8%  Similarity=0.002  Sum_probs=176.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC--CCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN--LPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~id   78 (288)
                      |||||++|||++++++|+++|++|++++|+.+..+            ....++.+|++|.++++++++++.+.+  +++|
T Consensus         7 lITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id   74 (236)
T 1ooe_A            7 IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   74 (236)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            69999999999999999999999999999875421            235778899999999999999999887  7999


Q ss_pred             eEEEccccCCC--C-CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFC--P-YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~--~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||+...  . .+.+.++|++.+++|+.+++.+++.++|.|.+       .++||++||..+..+           
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~-----------  136 (236)
T 1ooe_A           75 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMGP-----------  136 (236)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSC-----------
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEECchhhccC-----------
Confidence            99999998643  2 34556789999999999999999999999854       379999999988753           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhc--ccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQ--EEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                          .++...|++||++++.|+++++.+++  +.|  |+||+|+||+++|++......      ........+|+|+|+.
T Consensus       137 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~dvA~~  204 (236)
T 1ooe_A          137 ----TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDN--SAVLTIMPVTLDTPMNRKWMP------NADHSSWTPLSFISEH  204 (236)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTT--CEEEEEEESCBCCHHHHHHST------TCCGGGCBCHHHHHHH
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHHHHHhcccCCC--eEEEEEecCcccCcchhhcCC------CccccccCCHHHHHHH
Confidence                56778999999999999999999998  888  999999999999987532100      0011234689999999


Q ss_pred             HHHHhcCCCccCCCceeeccCc
Q 023054          234 TCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      +++++.++...+++|++|..++
T Consensus       205 i~~~l~s~~~~~~~G~~~~v~g  226 (236)
T 1ooe_A          205 LLKWTTETSSRPSSGALLKITT  226 (236)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEE
T ss_pred             HHHHHcCCCcccccccEEEEec
Confidence            9955534788999999887433

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=2.9e-36  Score=253.64  Aligned_cols=225  Identities=18%  Similarity=0.166  Sum_probs=164.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.++.              . +.+|++|.++++++++++   .+++|+|
T Consensus         5 lVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------~-~~~Dl~~~~~v~~~~~~~---~~~id~l   66 (257)
T 1fjh_A            5 VISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------D-LSTAEGRKQAIADVLAKC---SKGMDGL   66 (257)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------C-TTSHHHHHHHHHHHHTTC---TTCCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------c-cccCCCCHHHHHHHHHHh---CCCCCEE
Confidence            699999999999999999999999999998753211              1 678999999998887633   3789999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc------CC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ------KI  154 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~------~~  154 (288)
                      |||||+...     .+.+++.+++|+.+++.++++++|.|.+++     .++||++||..+...+.......      +.
T Consensus        67 v~~Ag~~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  136 (257)
T 1fjh_A           67 VLCAGLGPQ-----TKVLGNVVSVNYFGATELMDAFLPALKKGH-----QPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             EECCCCCTT-----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-----SCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             EECCCCCCC-----cccHHHHHHHhhHHHHHHHHHHHHHHhhcC-----CcEEEEECChhhhccccccchhhhhhcccch
Confidence            999998642     245899999999999999999999998754     58999999998873210000000      00


Q ss_pred             -------CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-hH--HHHHHH--HHHhh
Q 023054          155 -------NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-AV--VMRFLK--FFSFF  222 (288)
Q Consensus       155 -------~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~~--~~~~~~--~~~~~  222 (288)
                             ....+.++...|++||++++.+++.++.++++.|  |+||+|+||++.|++.... ..  ......  ..+..
T Consensus       137 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (257)
T 1fjh_A          137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG  214 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------------------CCCSTT
T ss_pred             hhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCccchhhccchhHHHHHHhcccccC
Confidence                   0002344678999999999999999999999998  9999999999999987643 10  111111  12334


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++.+|+|+|+.++|+++ +...+++|++|. ++|.
T Consensus       215 ~~~~~~dvA~~~~~l~~-~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          215 RRAEPSEMASVIAFLMS-PAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             SCCCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTH
T ss_pred             CCCCHHHHHHHHHHHhC-chhcCCcCCEEEECCCc
Confidence            57899999999999997 677899999887 5543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-34  Score=239.31  Aligned_cols=221  Identities=20%  Similarity=0.208  Sum_probs=178.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++|++|++++|+.+ .             .++.++.+|++|.++++++++++ +.++++|+|
T Consensus         6 lVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~l   70 (242)
T 1uay_A            6 LVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFAV   70 (242)
T ss_dssp             EEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEE
T ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceEE
Confidence            69999999999999999999999999999864 1             23588999999999999999999 777899999


Q ss_pred             EEccccCCCC--CCCCCC----cchhhhhhhhhHHHHHHHhhHHHHHHhhcc-CCCCCeEEEEcCccccccccCCccccC
Q 023054           81 INNAGIMFCP--YQISED----GIEMQFATNHIGHFLLTNLLLDTMNRTAKE-TGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      |||||.....  .+.+.+    ++++.+++|+.+++.++++++|.|.+++.. ....++||++||..+..+         
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------  141 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG---------  141 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC---------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC---------
Confidence            9999986542  233333    899999999999999999999999764210 001359999999988763         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HHHHHHHHh-hhcCChHHH
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MRFLKFFSF-FLWKNVPQG  230 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~-~~~~~~~~~  230 (288)
                            .++...|++||++++.+++.++.+++..|  |+|++|+||++.|++.......  .......+. .++.+|+|+
T Consensus       142 ------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  213 (242)
T 1uay_A          142 ------QIGQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEY  213 (242)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHH
T ss_pred             ------CCCCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHH
Confidence                  55678999999999999999999999998  9999999999999986544211  111112233 456799999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+.++++++ +  .+++|+.|. ++|+
T Consensus       214 a~~~~~l~~-~--~~~~G~~~~v~gG~  237 (242)
T 1uay_A          214 AALVLHILE-N--PMLNGEVVRLDGAL  237 (242)
T ss_dssp             HHHHHHHHH-C--TTCCSCEEEESTTC
T ss_pred             HHHHHHHhc-C--CCCCCcEEEEcCCe
Confidence            999999997 3  788999776 5554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=5.7e-34  Score=243.40  Aligned_cols=209  Identities=20%  Similarity=0.189  Sum_probs=176.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++++.|+++|++|++++|+.+.++++.+++...+ ..++.++.+|++|.++++++++++.+.++++|+|
T Consensus        32 lITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l  110 (286)
T 1xu9_A           32 IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDML  110 (286)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999999888887776653 3478999999999999999999999888999999


Q ss_pred             EEc-cccCCC-CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INN-AGIMFC-PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~-ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ||| ||.... ..+.+.+++++.+++|+.+++.++++++|.|.+.      .++||++||..+..+              
T Consensus       111 i~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~--------------  170 (286)
T 1xu9_A          111 ILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKVA--------------  170 (286)
T ss_dssp             EECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTSC--------------
T ss_pred             EECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC------CCEEEEECCcccccC--------------
Confidence            999 576533 2245678899999999999999999999998764      489999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhc--ccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQ--EEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~--~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|++||++++.++++++.++.  ..+  |+|++|+||+++|++.....      .........+|+++|+.+++
T Consensus       171 -~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~------~~~~~~~~~~~~~vA~~i~~  241 (286)
T 1xu9_A          171 -YPMVAAYSASKFALDGFFSSIRKEYSVSRVN--VSITLCVLGLIDTETAMKAV------SGIVHMQAAPKEECALEIIK  241 (286)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--CEEEEEEECCBCCHHHHHHS------CGGGGGGCBCHHHHHHHHHH
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEeecCccCChhHHHhc------cccccCCCCCHHHHHHHHHH
Confidence             56678999999999999999999994  456  99999999999998753210      00112345689999999999


Q ss_pred             Hhc
Q 023054          237 VAL  239 (288)
Q Consensus       237 l~~  239 (288)
                      .+.
T Consensus       242 ~~~  244 (286)
T 1xu9_A          242 GGA  244 (286)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            986

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.97  E-value=3e-32  Score=272.92  Aligned_cols=233  Identities=14%  Similarity=0.080  Sum_probs=183.5

Q ss_pred             CcccCCCh-hHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhc---
Q 023054            1 MLAGGASG-IGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIAL---   73 (288)
Q Consensus         1 lItGas~g-IG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~---   73 (288)
                      |||||++| ||+++|+.|+++|++|+++ +|+.+.++++.+++....+  +.++.++.||++|.++++++++++.+.   
T Consensus       679 LVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~  758 (1887)
T 2uv8_A          679 LITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKN  758 (1887)
T ss_dssp             EEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTT
T ss_pred             EEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhccc
Confidence            69999998 9999999999999999998 6888877777777644321  467899999999999999999999988   


Q ss_pred             --CC-CcceEEEccccCCCC---CCCC--CCcchhhhhhhhhHHHHHHHhh--HHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           74 --NL-PLNILINNAGIMFCP---YQIS--EDGIEMQFATNHIGHFLLTNLL--LDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        74 --~~-~id~lv~~ag~~~~~---~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                        +| ++|+||||||+....   .+.+  .++|++++++|+.+++.+++.+  +|.|.+++     .|+||++||..+..
T Consensus       759 ~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-----~G~IVnISS~ag~~  833 (1887)
T 2uv8_A          759 GGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-----AQVILPMSPNHGTF  833 (1887)
T ss_dssp             TSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-----EEEEEEECSCTTCS
T ss_pred             cccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-----CCEEEEEcChHhcc
Confidence              66 899999999986543   3455  6889999999999999999988  67775543     47999999998764


Q ss_pred             cccCCccccCCCCCCCCCccccchhhHHHHHHH-HHHHHHHhcccCCceEEEEeeCCccc-CCCCCCChHHHHHHHHHHh
Q 023054          144 TYKGGIRFQKINDRAGYSDKKAYGQSKLANILH-ANELSRRFQEEGVNITANSVHPGLIM-TNLFKHSAVVMRFLKFFSF  221 (288)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~~~~~~~~~i~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~  221 (288)
                      +                 +...|++||+|+.+| ++.++.+++..   |+||+|+||+++ |+|..............+.
T Consensus       834 g-----------------g~~aYaASKAAL~~Lttr~lA~ela~~---IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~pl  893 (1887)
T 2uv8_A          834 G-----------------GDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSANNIIAEGIEKMGV  893 (1887)
T ss_dssp             S-----------------CBTTHHHHHHHGGGHHHHHHHSSCTTT---EEEEEEEECCEECC-----CCTTHHHHHTTSC
T ss_pred             C-----------------CCchHHHHHHHHHHHHHHHHHHHhCCC---eEEEEEEecccccccccccchhHHHHHHhcCC
Confidence            2                 457899999999999 89999988875   999999999999 8886532222222222222


Q ss_pred             hhcCChHHHHHHHHHHhcCCC-ccCCCceeec---cCccCCCC
Q 023054          222 FLWKNVPQGAATTCYVALHPN-LKGVTGKYFL---DCNEMPPS  260 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~-~~~~tG~~~~---~~~~~~~~  260 (288)
                       +..+|+++|+.++||++ +. ..++||+.+.   ++|.....
T Consensus       894 -r~~sPEEVA~avlfLaS-d~~as~iTGq~I~VDVDGG~~~~~  934 (1887)
T 2uv8_A          894 -RTFSQKEMAFNLLGLLT-PEVVELCQKSPVMADLNGGLQFVP  934 (1887)
T ss_dssp             -CCEEHHHHHHHHHGGGS-HHHHHHHHHSCEEEEESCSTTTSS
T ss_pred             -CCCCHHHHHHHHHHHhC-CCccccccCcEEEEECCCCeeccc
Confidence             34589999999999997 55 6899999775   36654433

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=6.1e-33  Score=269.98  Aligned_cols=232  Identities=14%  Similarity=0.086  Sum_probs=183.2

Q ss_pred             CcccCCCh-hHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhc---
Q 023054            1 MLAGGASG-IGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIAL---   73 (288)
Q Consensus         1 lItGas~g-IG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~---   73 (288)
                      |||||++| ||+++|+.|+++|++|+++ +|+.+.+++..+++....+  +.++.++.||++|.++++++++++.+.   
T Consensus       480 LVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~  559 (1688)
T 2pff_A          480 LITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKN  559 (1688)
T ss_dssp             EECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTS
T ss_pred             EEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhccc
Confidence            69999998 9999999999999999998 6777666666666644322  457899999999999999999999988   


Q ss_pred             --CC-CcceEEEccccCCCC---CCCC--CCcchhhhhhhhhHHHHHHHhh--HHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           74 --NL-PLNILINNAGIMFCP---YQIS--EDGIEMQFATNHIGHFLLTNLL--LDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        74 --~~-~id~lv~~ag~~~~~---~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                        ++ ++|+||||||+....   .+.+  .++|++++++|+.+++.+++.+  +|.|.+++     .|+||++||.++..
T Consensus       560 ~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-----gGrIVnISSiAG~~  634 (1688)
T 2pff_A          560 GGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-----AQVILPMSPNHGTF  634 (1688)
T ss_dssp             SSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-----EEECCCCCSCTTTS
T ss_pred             cccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-----CCEEEEEEChHhcc
Confidence              77 899999999986443   3455  6889999999999999999998  77776543     47999999998764


Q ss_pred             cccCCccccCCCCCCCCCccccchhhHHHHHHH-HHHHHHHhcccCCceEEEEeeCCccc-CCCCCCChHHHHHHHHHHh
Q 023054          144 TYKGGIRFQKINDRAGYSDKKAYGQSKLANILH-ANELSRRFQEEGVNITANSVHPGLIM-TNLFKHSAVVMRFLKFFSF  221 (288)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~-~~~la~~~~~~~~~i~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~  221 (288)
                                       ++...|++||+|+.+| ++.++.+++..   |+||+|+||+++ |+|..............+.
T Consensus       635 -----------------Gg~saYaASKAAL~aLttrsLAeEla~~---IRVNaVaPG~V~TT~M~~~~e~~~~~l~~ipl  694 (1688)
T 2pff_A          635 -----------------GGDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSANNIIAEGIEKMGV  694 (1688)
T ss_dssp             -----------------SCBTTHHHHHHHHTHHHHHTTTSSCTTT---EECCCCCCCCCCCCSSSCTTTTCSTTTSSSSC
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHHcCCC---eEEEEEEECcCcCCcccCCchHHHHHHHhCCC
Confidence                             2457899999999998 78888888765   999999999999 7876532111111111121


Q ss_pred             hhcCChHHHHHHHHHHhcCCC-ccCCCceeec-c--CccCCC
Q 023054          222 FLWKNVPQGAATTCYVALHPN-LKGVTGKYFL-D--CNEMPP  259 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~-~~~~tG~~~~-~--~~~~~~  259 (288)
                       +..+|+++|+.++||++ +. ..++||+.+. +  +|....
T Consensus       695 -R~~sPEEVA~aIlFLaS-d~sAs~ITGq~I~VDVDGG~~~~  734 (1688)
T 2pff_A          695 -RTFSQKEMAFNLLGLLT-PEVVELCQKSPVMADLNGGLQFV  734 (1688)
T ss_dssp             -CCCCCCTTHHHHHHHTS-TTHHHHHTTSCCCCCCSCSGGGS
T ss_pred             -CCCCHHHHHHHHHHHhC-CCccccccCcEEEEEcCCCeeec
Confidence             34589999999999997 55 6899999775 2  565433

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=8.2e-31  Score=213.12  Aligned_cols=194  Identities=17%  Similarity=0.134  Sum_probs=160.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+++  +|++++|+.+..++..+++.     .  .++.+|++|.+++++++++    ++++|+|
T Consensus         4 lVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-----~--~~~~~D~~~~~~~~~~~~~----~~~id~v   70 (207)
T 2yut_A            4 LITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-----A--RALPADLADELEAKALLEE----AGPLDLL   70 (207)
T ss_dssp             EEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-----C--EECCCCTTSHHHHHHHHHH----HCSEEEE
T ss_pred             EEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-----C--cEEEeeCCCHHHHHHHHHh----cCCCCEE
Confidence            69999999999999999998  99999999988777666552     2  7889999999999998886    5789999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++.+++|+.+++.+++++    .+.+     .++||++||..+..+              
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-----~~~iv~~sS~~~~~~--------------  127 (207)
T 2yut_A           71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK-----GARAVFFGAYPRYVQ--------------  127 (207)
T ss_dssp             EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-----EEEEEEECCCHHHHS--------------
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-----CcEEEEEcChhhccC--------------
Confidence            999998644  235677889999999999999999998    2222     479999999987753              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|+++|++++.+++.++.+++..|  |++++|+||++.|++.....        .+...+.+|+|+|+.+++++
T Consensus       128 -~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~dva~~~~~~~  196 (207)
T 2yut_A          128 -VPGFAAYAAAKGALEAYLEAARKELLREG--VHLVLVRLPAVATGLWAPLG--------GPPKGALSPEEAARKVLEGL  196 (207)
T ss_dssp             -STTBHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEECCCCBCSGGGGGGT--------SCCTTCBCHHHHHHHHHHHH
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHHhhhC--CEEEEEecCcccCCCccccC--------CCCCCCCCHHHHHHHHHHHH
Confidence             56778999999999999999999999888  99999999999998743221        12245679999999999999


Q ss_pred             cCC
Q 023054          239 LHP  241 (288)
Q Consensus       239 ~~~  241 (288)
                      .++
T Consensus       197 ~~~  199 (207)
T 2yut_A          197 FRE  199 (207)
T ss_dssp             C--
T ss_pred             hCC
Confidence            743

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=5.1e-31  Score=263.59  Aligned_cols=231  Identities=16%  Similarity=0.079  Sum_probs=182.0

Q ss_pred             CcccCCCh-hHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHhhC--CCCceEEEEecCCChHHHHHHHHHHHhc---
Q 023054            1 MLAGGASG-IGLETARVLALRKAHVIIAA-RNMAAANEARQLILKED--DTARVDTLKLDLSSIASIKDFAQNFIAL---   73 (288)
Q Consensus         1 lItGas~g-IG~~ia~~La~~G~~V~~~~-r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~---   73 (288)
                      |||||++| ||+++|++|+++|++|++++ |+.+.+++..+++....  .+.++.++.||++|.++++++++++.+.   
T Consensus       656 LVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~  735 (1878)
T 2uv9_A          656 LMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNG  735 (1878)
T ss_dssp             EEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSS
T ss_pred             EEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhcc
Confidence            69999999 99999999999999999995 66777666666654332  1467999999999999999999999988   


Q ss_pred             CC-CcceEEEccccCCCC---CCCC--CCcchhhhhhhhhHHHHHHHh--hHHHHHHhhccCCCCCeEEEEcCccccccc
Q 023054           74 NL-PLNILINNAGIMFCP---YQIS--EDGIEMQFATNHIGHFLLTNL--LLDTMNRTAKETGIEGRIVNLSSIAHQYTY  145 (288)
Q Consensus        74 ~~-~id~lv~~ag~~~~~---~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~  145 (288)
                      +| +||+||||||+....   .+.+  .++|++++++|+.+++.+++.  ++|.|.+++     .|+||++||..+..+ 
T Consensus       736 ~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-----~G~IVnISS~ag~~g-  809 (1878)
T 2uv9_A          736 LGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-----AQVILPLSPNHGTFG-  809 (1878)
T ss_dssp             CCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-----EEECCEECSCSSSSS-
T ss_pred             cCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-----CCEEEEEcchhhccC-
Confidence            88 999999999986543   3555  688999999999999999987  667775432     479999999987652 


Q ss_pred             cCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHH-hcccCCceEEEEeeCCccc-CCCCCCChHHHHHHHHHHhhh
Q 023054          146 KGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR-FQEEGVNITANSVHPGLIM-TNLFKHSAVVMRFLKFFSFFL  223 (288)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~-~~~~~~~i~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~  223 (288)
                                      +...|++||+++.+|++.++.+ ++..   |+||+|+||+++ |+|..............+. +
T Consensus       810 ----------------g~~aYaASKAAL~aLt~~laAeEla~~---IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~pl-r  869 (1878)
T 2uv9_A          810 ----------------NDGLYSESKLALETLFNRWYSESWGNY---LTICGAVIGWTRGTGLMSANNLVAEGVEKLGV-R  869 (1878)
T ss_dssp             ----------------CCSSHHHHHHHHTTHHHHHHHSTTTTT---EEEEEEEECCBCCTTSCSHHHHTHHHHHTTTC-C
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHHHcCCC---eEEEEEEecceecCcccccchhhHHHHHhcCC-C
Confidence                            3568999999999998877665 6544   999999999999 9987642111122222222 3


Q ss_pred             cCChHHHHHHHHHHhcCCCc-cCCCceeec---cCccCC
Q 023054          224 WKNVPQGAATTCYVALHPNL-KGVTGKYFL---DCNEMP  258 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~-~~~tG~~~~---~~~~~~  258 (288)
                      ..+|+++|+.++||++ +.. .++||+.+.   |+|...
T Consensus       870 ~~sPeEVA~avlfLaS-d~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          870 TFSQQEMAFNLLGLMA-PAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             CBCHHHHHHHHHHHHS-HHHHHHHTTSCEEEEESCSGGG
T ss_pred             CCCHHHHHHHHHHHhC-CcccccccCcEEEEEcCCCccc
Confidence            4599999999999997 565 799999765   366543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=1.6e-31  Score=224.02  Aligned_cols=223  Identities=21%  Similarity=0.170  Sum_probs=168.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+||||++++++|+++|++|++++|+.+..+            .   .+.+|+++.++++++++++   .+++|+|
T Consensus         5 lVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~---~~~~D~~~~~~~~~~~~~~---~~~~d~v   66 (255)
T 2dkn_A            5 AITGSASGIGAALKELLARAGHTVIGIDRGQADIE------------A---DLSTPGGRETAVAAVLDRC---GGVLDGL   66 (255)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE------------C---CTTSHHHHHHHHHHHHHHH---TTCCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc------------c---cccCCcccHHHHHHHHHHc---CCCccEE
Confidence            69999999999999999999999999999865321            0   1578999999999888765   4689999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC----CCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK----IND  156 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~----~~~  156 (288)
                      |||||....     .+.++..+++|+.+++.+++++++.|.+.+     .++||++||..+............    .++
T Consensus        67 i~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  136 (255)
T 2dkn_A           67 VCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSRGQ-----QPAAVIVGSIAATQPGAAELPMVEAMLAGDE  136 (255)
T ss_dssp             EECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-----SCEEEEECCGGGGSTTGGGCHHHHHHHHTCH
T ss_pred             EECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-----CceEEEEeccccccccccccchhhhhcccch
Confidence            999997642     356899999999999999999999998753     479999999987753111000000    000


Q ss_pred             C-------CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHH--Hhhhc
Q 023054          157 R-------AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFF--SFFLW  224 (288)
Q Consensus       157 ~-------~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~--~~~~~  224 (288)
                      .       ...++...|+.||++++.+++.++.+++..+  |++++|+||++.|++....   .........+  +...+
T Consensus       137 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
T 2dkn_A          137 ARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRG--VRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRG  214 (255)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSC
T ss_pred             hhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCC
Confidence            0       0014667899999999999999999999888  9999999999999875432   0011111111  33456


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      .+++|+|+.++++++ +...+++|++|..+
T Consensus       215 ~~~~dva~~~~~l~~-~~~~~~~G~~~~v~  243 (255)
T 2dkn_A          215 SEPREVAEAIAFLLG-PQASFIHGSVLFVD  243 (255)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEES
T ss_pred             CCHHHHHHHHHHHhC-CCcccceeeEEEec
Confidence            799999999999996 55668899877743

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=2.7e-31  Score=215.28  Aligned_cols=192  Identities=20%  Similarity=0.252  Sum_probs=160.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||++++++|+ +|++|++++|+.+                   ++.+|++|.++++++++.+    +++|+|
T Consensus         7 lVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~~~d~v   62 (202)
T 3d7l_A            7 LLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----GKVDAI   62 (202)
T ss_dssp             EEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred             EEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence            699999999999999999 9999999999863                   4689999999999998875    689999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+++++.+++|+.+++.+++++.|.|.+       +++||++||..+..+              
T Consensus        63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~--------------  121 (202)
T 3d7l_A           63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-------KGSFTLTTGIMMEDP--------------  121 (202)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-------EEEEEEECCGGGTSC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc-------CCEEEEEcchhhcCC--------------
Confidence            999997643  235567889999999999999999999998853       369999999887652              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .++...|+.+|++++.+++.++.++ ..+  |++++|+||++.|++...       ....+.....+|+|+|+.+++++
T Consensus       122 -~~~~~~Y~~sK~~~~~~~~~~~~e~-~~g--i~v~~v~pg~v~~~~~~~-------~~~~~~~~~~~~~dva~~~~~~~  190 (202)
T 3d7l_A          122 -IVQGASAAMANGAVTAFAKSAAIEM-PRG--IRINTVSPNVLEESWDKL-------EPFFEGFLPVPAAKVARAFEKSV  190 (202)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHTTSC-STT--CEEEEEEECCBGGGHHHH-------GGGSTTCCCBCHHHHHHHHHHHH
T ss_pred             -CCccHHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEecCccCCchhhh-------hhhccccCCCCHHHHHHHHHHhh
Confidence             5667899999999999999999999 677  999999999999986321       11123345679999999999888


Q ss_pred             cCCCccCCCceeec
Q 023054          239 LHPNLKGVTGKYFL  252 (288)
Q Consensus       239 ~~~~~~~~tG~~~~  252 (288)
                      .    .+++|+.|.
T Consensus       191 ~----~~~~G~~~~  200 (202)
T 3d7l_A          191 F----GAQTGESYQ  200 (202)
T ss_dssp             H----SCCCSCEEE
T ss_pred             h----ccccCceEe
Confidence            3    467887664

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=4.4e-30  Score=235.62  Aligned_cols=210  Identities=14%  Similarity=0.067  Sum_probs=169.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEE-eCC-------------hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIA-ARN-------------MAAANEARQLILKEDDTARVDTLKLDLSSIASIKD   65 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~-~r~-------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   65 (288)
                      |||||++|||+++|++|+++|++ |+++ +|+             .+.++++.+++...  +.++.++.||++|.+++.+
T Consensus       255 LITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~~~v~~  332 (525)
T 3qp9_A          255 LVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTDAEAAAR  332 (525)
T ss_dssp             EESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTSHHHHHH
T ss_pred             EEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCCHHHHHH
Confidence            69999999999999999999997 7777 898             35556677777665  5789999999999999999


Q ss_pred             HHHHHHhcCCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           66 FAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        66 ~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                      +++++. .+++||+||||||+...  ..+.+.+++++++++|+.|++++.+.+.+.+.+++.    .++||++||.++..
T Consensus       333 ~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~----~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          333 LLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGR----PPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----C----CCEEEEEEEGGGTT
T ss_pred             HHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCC----CCEEEEECCHHHcC
Confidence            999988 68899999999998754  336788899999999999999999999999876421    37999999999887


Q ss_pred             cccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhh
Q 023054          144 TYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFL  223 (288)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  223 (288)
                      +               .++...|+++|+++++|    +.+++.+|  |++++|+||+++|+|.........+ .. ....
T Consensus       408 g---------------~~g~~~YaaaKa~l~~l----A~~~~~~g--i~v~sI~pG~~~tgm~~~~~~~~~~-~~-~g~~  464 (525)
T 3qp9_A          408 G---------------GAGQGAYAAGTAFLDAL----AGQHRADG--PTVTSVAWSPWEGSRVTEGATGERL-RR-LGLR  464 (525)
T ss_dssp             C---------------CTTCHHHHHHHHHHHHH----HTSCCSSC--CEEEEEEECCBTTSGGGSSHHHHHH-HH-TTBC
T ss_pred             C---------------CCCCHHHHHHHHHHHHH----HHHHHhCC--CCEEEEECCccccccccchhhHHHH-Hh-cCCC
Confidence            3               67788999999998876    56677778  9999999999999998543222211 11 1223


Q ss_pred             cCChHHHHHHHHHHhcC
Q 023054          224 WKNVPQGAATTCYVALH  240 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~  240 (288)
                      ..+|+++++.+.+++..
T Consensus       465 ~l~pee~a~~l~~~l~~  481 (525)
T 3qp9_A          465 PLAPATALTALDTALGH  481 (525)
T ss_dssp             CBCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhC
Confidence            46899999999999974

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=2.5e-28  Score=255.12  Aligned_cols=223  Identities=13%  Similarity=0.035  Sum_probs=167.2

Q ss_pred             CcccCCCh-hHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh--
Q 023054            1 MLAGGASG-IGLETARVLALRKAHVIIAARNMAA-----ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA--   72 (288)
Q Consensus         1 lItGas~g-IG~~ia~~La~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--   72 (288)
                      |||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...  +.++.++.+|++|.++++++++++.+  
T Consensus      2140 LVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv~~i~~~~ 2217 (3089)
T 3zen_D         2140 VVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLVEWVGTEQ 2217 (3089)
T ss_dssp             EEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHHHHHTSCC
T ss_pred             EEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHHHHHhhh
Confidence            69999999 9999999999999999999998766     55555555433  56789999999999999999999998  


Q ss_pred             --cCCCcceEEEccccC----C---CCCCCCCCcchhh----hhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCc
Q 023054           73 --LNLPLNILINNAGIM----F---CPYQISEDGIEMQ----FATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSI  139 (288)
Q Consensus        73 --~~~~id~lv~~ag~~----~---~~~~~~~~~~~~~----~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  139 (288)
                        .+|++|+||||||+.    .   ...+.+.++|+..    +++|+.+++.+++.+.+.|...... ...+.|+++|+.
T Consensus      2218 ~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g-~~~~ii~~~ss~ 2296 (3089)
T 3zen_D         2218 TESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIA-SRLHVVLPGSPN 2296 (3089)
T ss_dssp             EEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-CCEEEEEEECSS
T ss_pred             hhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-ceeEEEEECCcc
Confidence              789999999999982    1   1223455667766    9999999999999999999875310 001123333333


Q ss_pred             cccccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHH--hcccCCceEEEEeeCCccc-CCCCCCChHHHHHH
Q 023054          140 AHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR--FQEEGVNITANSVHPGLIM-TNLFKHSAVVMRFL  216 (288)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~--~~~~~~~i~v~~v~PG~v~-t~~~~~~~~~~~~~  216 (288)
                      .+.                 .++...|++||+|+.+|+++|+.|  ++. +  |+||+|+||+++ |++...........
T Consensus      2297 ~g~-----------------~g~~~aYsASKaAl~~LtrslA~E~~~a~-~--IrVn~v~PG~v~tT~l~~~~~~~~~~~ 2356 (3089)
T 3zen_D         2297 RGM-----------------FGGDGAYGEAKSALDALENRWSAEKSWAE-R--VSLAHALIGWTKGTGLMGQNDAIVSAV 2356 (3089)
T ss_dssp             TTS-----------------CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-T--EEEEEEECCCEECSTTTTTTTTTHHHH
T ss_pred             ccc-----------------CCCchHHHHHHHHHHHHHHHHHhccccCC-C--eEEEEEeecccCCCcccccchhHHHHH
Confidence            221                 234468999999999999999999  664 4  999999999998 77765432222222


Q ss_pred             HHHHhhhcCChHHHHHHHHHHhcCCCccCCCc
Q 023054          217 KFFSFFLWKNVPQGAATTCYVALHPNLKGVTG  248 (288)
Q Consensus       217 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG  248 (288)
                      ...+. +..+|+|+|..++||+| +.+.++++
T Consensus      2357 ~~~~~-r~~~PeEIA~avlfLaS-~~a~~~~~ 2386 (3089)
T 3zen_D         2357 EEAGV-TTYTTDEMAAMLLDLCT-VETKVAAA 2386 (3089)
T ss_dssp             GGGSC-BCEEHHHHHHHHHHTTS-HHHHHHHH
T ss_pred             HhcCC-CCCCHHHHHHHHHHHhC-hhhhhHhc
Confidence            22222 23489999999999998 66555433

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=4.9e-28  Score=219.80  Aligned_cols=205  Identities=20%  Similarity=0.153  Sum_probs=162.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCCh---HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNM---AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||++|||+++|++|+++|+ +|++++|+.   +..+++.+++...  +.++.++.||++|.+++.++++++.+. ++
T Consensus       243 LITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~~-g~  319 (496)
T 3mje_A          243 LVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPED-AP  319 (496)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCTT-SC
T ss_pred             EEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHh-CC
Confidence            6999999999999999999999 899999974   3355666666665  578999999999999999999988776 68


Q ss_pred             cceEEEccccC-CC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           77 LNILINNAGIM-FC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        77 id~lv~~ag~~-~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      +|+||||||+. ..  ..+.+.++|++.+++|+.+++++.+.+.+.+         .++||++||.++..+         
T Consensus       320 ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~---------~~~iV~~SS~a~~~g---------  381 (496)
T 3mje_A          320 LTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD---------LDAFVLFSSGAAVWG---------  381 (496)
T ss_dssp             EEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC---------CSEEEEEEEHHHHTT---------
T ss_pred             CeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC---------CCEEEEEeChHhcCC---------
Confidence            99999999987 33  3467888999999999999999999876642         479999999998873         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC-ChHHHHHHHHHHhhhcCChHHHHH
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH-SAVVMRFLKFFSFFLWKNVPQGAA  232 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~  232 (288)
                            .++...|+++|+++++|++.    +...|  |++++|+||++.+..... ......+. . ......+|+++++
T Consensus       382 ------~~g~~~YaAaKa~ldala~~----~~~~G--i~v~sV~pG~w~~~gm~~~~~~~~~l~-~-~g~~~l~pe~~~~  447 (496)
T 3mje_A          382 ------SGGQPGYAAANAYLDALAEH----RRSLG--LTASSVAWGTWGEVGMATDPEVHDRLV-R-QGVLAMEPEHALG  447 (496)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHH----HHHTT--CCCEEEEECEESSSCC------CHHHH-H-TTEEEECHHHHHH
T ss_pred             ------CCCcHHHHHHHHHHHHHHHH----HHhcC--CeEEEEECCcccCCccccChHHHHHHH-h-cCCCCCCHHHHHH
Confidence                  67788999999998887664    45667  999999999986554332 11111111 1 1122358999999


Q ss_pred             HHHHHhcC
Q 023054          233 TTCYVALH  240 (288)
Q Consensus       233 ~~~~l~~~  240 (288)
                      .+.+++..
T Consensus       448 ~l~~~l~~  455 (496)
T 3mje_A          448 ALDQMLEN  455 (496)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHcC
Confidence            99999973

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=2e-27  Score=227.58  Aligned_cols=208  Identities=16%  Similarity=0.192  Sum_probs=168.5

Q ss_pred             CcccCCChhHHHHHHHHH-HCCC-EEEEEeCC---hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLA-LRKA-HVIIAARN---MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La-~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||++|||+++|++|+ ++|+ +|++++|+   .+..+++.+++...  +.++.++.||++|.++++++++++.+.+ 
T Consensus       534 lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~~~~~-  610 (795)
T 3slk_A          534 LVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASIPDEH-  610 (795)
T ss_dssp             EEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCTTS-
T ss_pred             eeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHhC-
Confidence            699999999999999999 7999 59999998   44566777777665  6789999999999999999999988776 


Q ss_pred             CcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           76 PLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        76 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      +||+||||||+...  ..+.+.++|++.+++|+.|++++.+++.|.|           +||++||.++..          
T Consensus       611 ~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-----------~iV~~SS~ag~~----------  669 (795)
T 3slk_A          611 PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-----------ALVLFSSVSGVL----------  669 (795)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-----------EEEEEEETHHHH----------
T ss_pred             CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-----------EEEEEccHHhcC----------
Confidence            89999999999765  3478889999999999999999999997655           699999999987          


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHH--hhhcCChHHHH
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFS--FFLWKNVPQGA  231 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~a  231 (288)
                           +.+++..|+++|+    |+++|+++++.+|  |++|+|+||++.|.+.... ........+.  .....++++..
T Consensus       670 -----g~~g~~~YaAaka----~~~alA~~~~~~G--i~v~sI~pG~v~t~g~~~~-~~~~~~~~~~~~g~~~l~~~e~~  737 (795)
T 3slk_A          670 -----GSGGQGNYAAANS----FLDALAQQRQSRG--LPTRSLAWGPWAEHGMAST-LREAEQDRLARSGLLPISTEEGL  737 (795)
T ss_dssp             -----TCSSCHHHHHHHH----HHHHHHHHHHHTT--CCEEEEEECCCSCCCHHHH-HHHHHHHHHHHTTBCCCCHHHHH
T ss_pred             -----CCCCCHHHHHHHH----HHHHHHHHHHHcC--CeEEEEECCeECcchhhcc-ccHHHHHHHHhcCCCCCCHHHHH
Confidence                 4778899999995    6777888888889  9999999999998764322 1111111121  12335788888


Q ss_pred             HHHHHHhcCCCcc
Q 023054          232 ATTCYVALHPNLK  244 (288)
Q Consensus       232 ~~~~~l~~~~~~~  244 (288)
                      +.+.+++.++.+.
T Consensus       738 ~~~~~~l~~~~~~  750 (795)
T 3slk_A          738 SQFDAACGGAHTV  750 (795)
T ss_dssp             HHHHHHHTSSCSS
T ss_pred             HHHHHHHhCCCcE
Confidence            8888888655443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=3.8e-25  Score=186.80  Aligned_cols=189  Identities=17%  Similarity=0.126  Sum_probs=152.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+||||+++++.|+++|++|++++|++....           ..++.++.+|++|.+++.++++       ++|+|
T Consensus         7 lVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v   68 (267)
T 3rft_A            7 LVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA-------GCDGI   68 (267)
T ss_dssp             EEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc-------CCCEE
Confidence            69999999999999999999999999999864322           3568999999999999988876       68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||..      +.+.+++.+++|+.+++.+++++.+.    +     .++||++||..++...+.   ...+.+....
T Consensus        69 i~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~~----~-----~~~iv~~SS~~~~g~~~~---~~~~~e~~~~  130 (267)
T 3rft_A           69 VHLGGIS------VEKPFEQILQGNIIGLYNLYEAARAH----G-----QPRIVFASSNHTIGYYPQ---TERLGPDVPA  130 (267)
T ss_dssp             EECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHHT----T-----CCEEEEEEEGGGGTTSBT---TSCBCTTSCC
T ss_pred             EECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEEcchHHhCCCCC---CCCCCCCCCC
Confidence            9999983      45678999999999999999999432    2     479999999887642221   2234455566


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhcC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  240 (288)
                      .+...|+.||++.+.+++.++.++   +  +++++|.||.+.+++.....          ...+.+++++++.+..++..
T Consensus       131 ~~~~~Y~~sK~~~e~~~~~~a~~~---g--~~~~~vr~~~v~~~~~~~~~----------~~~~~~~~d~a~~~~~~~~~  195 (267)
T 3rft_A          131 RPDGLYGVSKCFGENLARMYFDKF---G--QETALVRIGSCTPEPNNYRM----------LSTWFSHDDFVSLIEAVFRA  195 (267)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECBCSSSCCSTTH----------HHHBCCHHHHHHHHHHHHHC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---C--CeEEEEEeecccCCCCCCCc----------eeeEEcHHHHHHHHHHHHhC
Confidence            777899999999999999999886   4  77888889888887655431          12246899999999999863

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=8.1e-25  Score=199.96  Aligned_cols=202  Identities=19%  Similarity=0.178  Sum_probs=161.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChH---HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMA---AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||++|||++++++|+++|+ +|++++|+..   ..++..+++...  +.++.++.||++|.+++.++++.     ++
T Consensus       263 LITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~-----~~  335 (511)
T 2z5l_A          263 LITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA-----YP  335 (511)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH-----SC
T ss_pred             EEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc-----CC
Confidence            6999999999999999999999 6999999874   345566666554  57899999999999999998876     68


Q ss_pred             cceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           77 LNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        77 id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      +|+||||||+....  .+.+.++++..+++|+.+++++.+.+.+..   .     .++||++||..+..+          
T Consensus       336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~-----~~~~V~~SS~a~~~g----------  397 (511)
T 2z5l_A          336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK---G-----LDAFVLFSSVTGTWG----------  397 (511)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---T-----CCCEEEEEEGGGTTC----------
T ss_pred             CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---C-----CCEEEEEeCHHhcCC----------
Confidence            99999999987543  356778899999999999999998775421   1     479999999988763          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcc-cCCCCCCChHHHHHHHHHHhhhcCChHHHHHH
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLI-MTNLFKHSAVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                           .++...|+++|++++.|++.+    ...|  +++++|+||++ .|+|..... .... . .......+|+++++.
T Consensus       398 -----~~g~~~YaaaKa~ld~la~~~----~~~g--i~v~sv~pG~~~~tgm~~~~~-~~~~-~-~~g~~~l~~e~~a~~  463 (511)
T 2z5l_A          398 -----NAGQGAYAAANAALDALAERR----RAAG--LPATSVAWGLWGGGGMAAGAG-EESL-S-RRGLRAMDPDAAVDA  463 (511)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHH----HTTT--CCCEEEEECCBCSTTCCCCHH-HHHH-H-HHTBCCBCHHHHHHH
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHH----HHcC--CcEEEEECCcccCCccccccc-HHHH-H-hcCCCCCCHHHHHHH
Confidence                 567789999999999888754    4557  99999999999 888876531 1111 1 122345799999999


Q ss_pred             HHHHhcCC
Q 023054          234 TCYVALHP  241 (288)
Q Consensus       234 ~~~l~~~~  241 (288)
                      +.+++..+
T Consensus       464 l~~al~~~  471 (511)
T 2z5l_A          464 LLGAMGRN  471 (511)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHhCC
Confidence            99999643

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=1.3e-25  Score=204.46  Aligned_cols=203  Identities=18%  Similarity=0.182  Sum_probs=157.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChH---HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMA---AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||+||||++++++|+++|+ +|++++|+..   ..+++.+++...  +.++.++.||++|.+++.++++.+ ..+++
T Consensus       230 LITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i-~~~g~  306 (486)
T 2fr1_A          230 LVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI-GDDVP  306 (486)
T ss_dssp             EEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS-CTTSC
T ss_pred             EEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH-HhcCC
Confidence            6999999999999999999999 5999999875   345566666554  568999999999999999999988 55689


Q ss_pred             cceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           77 LNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        77 id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      +|+||||||+....  .+.+.+++++.+++|+.+++++.+.+.+.    +     .++||++||.++..+          
T Consensus       307 ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~-----~~~~V~~SS~a~~~g----------  367 (486)
T 2fr1_A          307 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL----D-----LTAFVLFSSFASAFG----------  367 (486)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS----C-----CSEEEEEEEHHHHTC----------
T ss_pred             CcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC----C-----CCEEEEEcChHhcCC----------
Confidence            99999999987542  35678899999999999999999887542    1     579999999988763          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC-CCCCChHHHHHHHHH--HhhhcCChHHHH
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN-LFKHSAVVMRFLKFF--SFFLWKNVPQGA  231 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~-~~~~~~~~~~~~~~~--~~~~~~~~~~~a  231 (288)
                           .++...|+++|++++.|++.    +...|  +++++|+||++.++ |.....     ...+  ......+|++++
T Consensus       368 -----~~g~~~Yaaaka~l~~la~~----~~~~g--i~v~~i~pG~~~~~gm~~~~~-----~~~~~~~g~~~i~~e~~a  431 (486)
T 2fr1_A          368 -----APGLGGYAPGNAYLDGLAQQ----RRSDG--LPATAVAWGTWAGSGMAEGPV-----ADRFRRHGVIEMPPETAC  431 (486)
T ss_dssp             -----CTTCTTTHHHHHHHHHHHHH----HHHTT--CCCEEEEECCBC-----------------CTTTTEECBCHHHHH
T ss_pred             -----CCCCHHHHHHHHHHHHHHHH----HHhcC--CeEEEEECCeeCCCcccchhH-----HHHHHhcCCCCCCHHHHH
Confidence                 56678999999998887654    44567  99999999999876 443210     0111  112346899999


Q ss_pred             HHHHHHhcCC
Q 023054          232 ATTCYVALHP  241 (288)
Q Consensus       232 ~~~~~l~~~~  241 (288)
                      +.+.+++..+
T Consensus       432 ~~l~~~l~~~  441 (486)
T 2fr1_A          432 RALQNALDRA  441 (486)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHhCC
Confidence            9999999743

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.91  E-value=3.7e-23  Score=180.26  Aligned_cols=216  Identities=12%  Similarity=0.050  Sum_probs=157.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEE-EecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTL-KLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++|++|++++|+.+..+.+.+.+.... +.++.++ .+|++|.+++.++++       ++|+
T Consensus        15 lVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~-------~~d~   86 (342)
T 1y1p_A           15 LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIK-------GAAG   86 (342)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTT-------TCSE
T ss_pred             EEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHc-------CCCE
Confidence            699999999999999999999999999999887766665554432 2568888 899999887766553       7999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC-
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA-  158 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~-  158 (288)
                      ||||||.....     +++++.+++|+.++..+++++.+.   ..     .++||++||...+..........++++.. 
T Consensus        87 vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~~~~~~---~~-----~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  153 (342)
T 1y1p_A           87 VAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAAT---PS-----VKRFVLTSSTVSALIPKPNVEGIYLDEKSW  153 (342)
T ss_dssp             EEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTC---TT-----CCEEEEECCGGGTCCCCTTCCCCEECTTCC
T ss_pred             EEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhC---CC-----CcEEEEeccHHHhcCCCCCCCCcccCcccc
Confidence            99999976431     457889999999999999988652   11     36999999987653211100001111111 


Q ss_pred             ---------------CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHH-
Q 023054          159 ---------------GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFF-  219 (288)
Q Consensus       159 ---------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~-  219 (288)
                                     ...+...|+.||++.+.+++.++.+++. +  ++++++.||.+.++......   ....+...+ 
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~--~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~  230 (342)
T 1y1p_A          154 NLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-H--FTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLF  230 (342)
T ss_dssp             CHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-S--SEEEEEEESEEECCCSCTTTCCCHHHHHHHHHH
T ss_pred             CchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-C--ceEEEEcCCceECCCCCCCCCCccHHHHHHHHH
Confidence                           1235678999999999999999999876 5  99999999999998765321   222222211 


Q ss_pred             -----------HhhhcCChHHHHHHHHHHhcC
Q 023054          220 -----------SFFLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       220 -----------~~~~~~~~~~~a~~~~~l~~~  240 (288)
                                 +...+..++|+|+.+++++..
T Consensus       231 ~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  262 (342)
T 1y1p_A          231 NGEVSPALALMPPQYYVSAVDIGLLHLGCLVL  262 (342)
T ss_dssp             TTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC
T ss_pred             cCCCccccccCCcCCEeEHHHHHHHHHHHHcC
Confidence                       112345789999999999963

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.90  E-value=3.6e-23  Score=178.82  Aligned_cols=244  Identities=12%  Similarity=-0.003  Sum_probs=175.5

Q ss_pred             CcccCCChhHHHHHHHHH-HCCCEEEEEeCChH------------HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLA-LRKAHVIIAARNMA------------AANEARQLILKEDDTARVDTLKLDLSSIASIKDFA   67 (288)
Q Consensus         1 lItGas~gIG~~ia~~La-~~G~~V~~~~r~~~------------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   67 (288)
                      ||||||+|||++++..|| +.|+.++++++..+            ....+.+.++..  +.+...+.||++|.+++++++
T Consensus        54 LVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d~e~i~~vi  131 (401)
T 4ggo_A           54 LVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFSDEIKAQVI  131 (401)
T ss_dssp             EEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTSHHHHHHHH
T ss_pred             EEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCCHHHHHHHH
Confidence            699999999999999999 78999999887543            233445556555  678999999999999999999


Q ss_pred             HHHHhcCCCcceEEEccccCCCCC-----------------------CC-------------CCCcchhhhhh---hhhH
Q 023054           68 QNFIALNLPLNILINNAGIMFCPY-----------------------QI-------------SEDGIEMQFAT---NHIG  108 (288)
Q Consensus        68 ~~~~~~~~~id~lv~~ag~~~~~~-----------------------~~-------------~~~~~~~~~~~---n~~~  108 (288)
                      +++++.+|+||+||||++......                       +.             +.++++.+..+   ..++
T Consensus       132 ~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~~s  211 (401)
T 4ggo_A          132 EEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGEDWE  211 (401)
T ss_dssp             HHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHHHH
T ss_pred             HHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhHHH
Confidence            999999999999999999752100                       01             11223334443   3344


Q ss_pred             HHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCcc--ccchhhHHHHHHHHHHHHHHhcc
Q 023054          109 HFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDK--KAYGQSKLANILHANELSRRFQE  186 (288)
Q Consensus       109 ~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~~~~~  186 (288)
                      .+...+...++|.+       +++++.+|+..+...               +|.+  ..+|++|++|+..++.|+.++++
T Consensus       212 ~w~~al~~a~lla~-------G~siva~SYiGse~t---------------~P~Y~~G~mG~AKaaLEa~~r~La~eL~~  269 (401)
T 4ggo_A          212 RWIKQLSKEGLLEE-------GCITLAYSYIGPEAT---------------QALYRKGTIGKAKEHLEATAHRLNKENPS  269 (401)
T ss_dssp             HHHHHHHHTTCEEE-------EEEEEEEECCCCGGG---------------HHHHTTSHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHhhhcccC-------CceEEEEeccCccee---------------ecCCCccHHHHHHHHHHHHHHHHHHhcCC
Confidence            45555555555543       689999999876542               3322  35799999999999999999984


Q ss_pred             cCCceEEEEeeCCcccCCCCCCChHHHHHHH---HHHhhhcCChHHHHHHHHHHhcCCCccCC-Ccee-eccCccCCCCc
Q 023054          187 EGVNITANSVHPGLIMTNLFKHSAVVMRFLK---FFSFFLWKNVPQGAATTCYVALHPNLKGV-TGKY-FLDCNEMPPSA  261 (288)
Q Consensus       187 ~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~~~~-tG~~-~~~~~~~~~~~  261 (288)
                          +++|++.||.+.|+.....+.......   +... ...+-|.+++.+.+|..  +.-|- .|.. +.+.+..+.++
T Consensus       270 ----~~a~v~v~~a~vT~AssaIP~~ply~~~l~kvmk-~~g~heg~ieq~~rl~~--~~ly~~~~~~~~D~~~r~r~d~  342 (401)
T 4ggo_A          270 ----IRAFVSVNKGLVTRASAVIPVIPLYLASLFKVMK-EKGNHEGCIEQITRLYA--ERLYRKDGTIPVDEENRIRIDD  342 (401)
T ss_dssp             ----EEEEEEECCCCCCTTGGGSSSHHHHHHHHHHHHH-HHTCCCCHHHHHHHHHH--HTTSCTTCCCCCCTTSCEESCT
T ss_pred             ----CcEEEEEcCccccchhhcCCCchHHHHHHHHHHH-hcCCCCchHHHHHHHHH--HhhccCCCCCCcCCCCCccCch
Confidence                899999999999998877753332221   1111 12467899999999996  22332 2332 34557788889


Q ss_pred             cccCHHHHH---HHHHH
Q 023054          262 LARDETLAK---KLWDF  275 (288)
Q Consensus       262 ~~~~~~~~~---~~~~~  275 (288)
                      +.+++++|+   ++|+.
T Consensus       343 ~el~~~vq~~v~~~~~~  359 (401)
T 4ggo_A          343 WELEEDVQKAVSALMEK  359 (401)
T ss_dssp             TTTCHHHHHHHHHHHHH
T ss_pred             hhcCHHHHHHHHHHHHH
Confidence            999999996   55654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.90  E-value=6e-23  Score=179.34  Aligned_cols=227  Identities=14%  Similarity=0.094  Sum_probs=160.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||+++++.|+++|++|++++|+. .........+..   ..++.++.+|++|.+++.++++..     ++|+
T Consensus         5 lVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            5 LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            6999999999999999999999999999853 222222333332   246889999999999999888753     6999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc----------
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI----------  149 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~----------  149 (288)
                      ||||||....  ..+.++++..+++|+.++..+++++.+.+.        .++||++||...+.......          
T Consensus        77 vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--------~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~  146 (347)
T 1orr_A           77 CFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS--------NCNIIYSSTNKVYGDLEQYKYNETETRYTC  146 (347)
T ss_dssp             EEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEEEEGGGGTTCTTSCEEECSSCEEE
T ss_pred             EEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--------CceEEEeccHHHhCCCCcCCcccccccccc
Confidence            9999997532  123356788999999999999999987642        25899999976543211100          


Q ss_pred             --cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHH-----
Q 023054          150 --RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFF-----  219 (288)
Q Consensus       150 --~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~-----  219 (288)
                        ....+++.....+...|+.+|++.+.+++.++.++   +  ++++++.||.+.++.....   .....+....     
T Consensus       147 ~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  221 (347)
T 1orr_A          147 VDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---G--LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKN  221 (347)
T ss_dssp             TTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHT
T ss_pred             cccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcc
Confidence              00112333345567889999999999999998876   5  9999999999999875321   1122222211     


Q ss_pred             ----Hhhh---------cCChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          220 ----SFFL---------WKNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       220 ----~~~~---------~~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                          +...         +..++|+|+.+++++..  ....+|+.|.
T Consensus       222 ~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~--~~~~~g~~~~  265 (347)
T 1orr_A          222 GINKPFTISGNGKQVRDVLHAEDMISLYFTALAN--VSKIRGNAFN  265 (347)
T ss_dssp             TCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT--HHHHTTCEEE
T ss_pred             cCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc--cccCCCCEEE
Confidence                1111         23789999999999962  2345676555

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.90  E-value=5e-23  Score=178.08  Aligned_cols=214  Identities=16%  Similarity=0.122  Sum_probs=158.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||+++++.|+++|++|++++|+... +.    +       ++.++.+|++|.+++.++++.     +++|+|
T Consensus        16 lVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~-----~~~d~v   78 (321)
T 2pk3_A           16 LITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD-----IKPDYI   78 (321)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH-----HCCSEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh-----cCCCEE
Confidence            699999999999999999999999999998653 11    1       588899999999999988875     369999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||....  ..+.++++..+++|+.++..+++++ +.+.  +     .++||++||...+....  ....++++....
T Consensus        79 ih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~-----~~~iv~~SS~~v~g~~~--~~~~~~~E~~~~  146 (321)
T 2pk3_A           79 FHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L-----DCRILTIGSSEEYGMIL--PEESPVSEENQL  146 (321)
T ss_dssp             EECCSCCCH--HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C-----CCEEEEEEEGGGTBSCC--GGGCSBCTTSCC
T ss_pred             EEcCcccch--hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C-----CCeEEEEccHHhcCCCC--CCCCCCCCCCCC
Confidence            999997543  2234578899999999999999999 5442  1     46999999987543210  011233444445


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh------------------h
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF------------------F  222 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------------------~  222 (288)
                      .+...|+.+|++.+.+++.++.++   +  ++++++.||.+.++..........+......                  .
T Consensus       147 ~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  221 (321)
T 2pk3_A          147 RPMSPYGVSKASVGMLARQYVKAY---G--MDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVR  221 (321)
T ss_dssp             BCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHc---C--CCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEE
Confidence            567889999999999999998774   5  9999999999998876543222222222111                  1


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      .+..++|+|+.+++++..+    .+|..|.
T Consensus       222 ~~v~v~Dva~a~~~~~~~~----~~g~~~~  247 (321)
T 2pk3_A          222 DFTDVRDIVQAYWLLSQYG----KTGDVYN  247 (321)
T ss_dssp             EEEEHHHHHHHHHHHHHHC----CTTCEEE
T ss_pred             eeEEHHHHHHHHHHHHhCC----CCCCeEE
Confidence            2347889999999999632    3455444

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.90  E-value=6.2e-24  Score=176.01  Aligned_cols=195  Identities=14%  Similarity=0.101  Sum_probs=144.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCce-EEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARV-DTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++|++|++++|+.+..+++..        .++ .++.+|++         +.+.+.++++|+
T Consensus        25 lVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~---------~~~~~~~~~~D~   87 (236)
T 3e8x_A           25 LVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE---------EDFSHAFASIDA   87 (236)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT---------SCCGGGGTTCSE
T ss_pred             EEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH---------HHHHHHHcCCCE
Confidence            699999999999999999999999999999887665432        257 89999999         233344568999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ||||||...      .+++++.+++|+.++..+++++...    +     .++||++||..+..+.            ..
T Consensus        88 vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~iv~~SS~~~~~~~------------~~  140 (236)
T 3e8x_A           88 VVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEKR----G-----IKRFIMVSSVGTVDPD------------QG  140 (236)
T ss_dssp             EEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHHH----T-----CCEEEEECCTTCSCGG------------GS
T ss_pred             EEECCCCCC------CCCccccchhhHHHHHHHHHHHHHc----C-----CCEEEEEecCCCCCCC------------CC
Confidence            999999753      3568999999999999999988432    2     4799999996544320            00


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhc
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  239 (288)
                      +.+...|+.+|++++.+++       ..+  +++++|.||++.++..........  .......+.+++|+|+.+++++.
T Consensus       141 ~~~~~~Y~~sK~~~e~~~~-------~~g--i~~~~lrpg~v~~~~~~~~~~~~~--~~~~~~~~i~~~Dva~~~~~~~~  209 (236)
T 3e8x_A          141 PMNMRHYLVAKRLADDELK-------RSS--LDYTIVRPGPLSNEESTGKVTVSP--HFSEITRSITRHDVAKVIAELVD  209 (236)
T ss_dssp             CGGGHHHHHHHHHHHHHHH-------HSS--SEEEEEEECSEECSCCCSEEEEES--SCSCCCCCEEHHHHHHHHHHHTT
T ss_pred             hhhhhhHHHHHHHHHHHHH-------HCC--CCEEEEeCCcccCCCCCCeEEecc--CCCcccCcEeHHHHHHHHHHHhc
Confidence            1466889999999888765       456  999999999999987543210000  00011344689999999999996


Q ss_pred             CCCccCCCceeecc
Q 023054          240 HPNLKGVTGKYFLD  253 (288)
Q Consensus       240 ~~~~~~~tG~~~~~  253 (288)
                      ++.   .+|+.|..
T Consensus       210 ~~~---~~g~~~~v  220 (236)
T 3e8x_A          210 QQH---TIGKTFEV  220 (236)
T ss_dssp             CGG---GTTEEEEE
T ss_pred             Ccc---ccCCeEEE
Confidence            332   56776654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.89  E-value=3.8e-23  Score=169.54  Aligned_cols=186  Identities=8%  Similarity=0.013  Sum_probs=137.2

Q ss_pred             CcccCCChhHHHHHHHHH-HCCCEEEEEeCChH-HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLA-LRKAHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+||||+++++.|+ ++|++|++++|+++ .++++.    ..  ..++.++.+|++|.+++.++++       ++|
T Consensus         9 lVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~-------~~d   75 (221)
T 3r6d_A            9 TILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT-------NAE   75 (221)
T ss_dssp             EEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             EEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc-------CCC
Confidence            699999999999999999 89999999999987 655433    11  4578999999999999888775       689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||||||..                 |+.     ++.+++.|.+.+     .++||++||..+...              
T Consensus        76 ~vv~~ag~~-----------------n~~-----~~~~~~~~~~~~-----~~~iv~iSs~~~~~~--------------  114 (221)
T 3r6d_A           76 VVFVGAMES-----------------GSD-----MASIVKALSRXN-----IRRVIGVSMAGLSGE--------------  114 (221)
T ss_dssp             EEEESCCCC-----------------HHH-----HHHHHHHHHHTT-----CCEEEEEEETTTTSC--------------
T ss_pred             EEEEcCCCC-----------------Chh-----HHHHHHHHHhcC-----CCeEEEEeeceecCC--------------
Confidence            999999853                 222     788888887754     579999999876542              


Q ss_pred             CCCccc----------cchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC-CCCCChHHHHHHHHHHhhhcCCh
Q 023054          159 GYSDKK----------AYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN-LFKHSAVVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       159 ~~~~~~----------~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~  227 (288)
                       .+...          .|+.+|.+++.+.+.       .+  +++++|.||++.++ ..........  .........++
T Consensus       115 -~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~--i~~~~vrpg~v~~~~~~~~~~~~~~--~~~~~~~~~~~  182 (221)
T 3r6d_A          115 -FPVALEKWTFDNLPISYVQGERQARNVLRE-------SN--LNYTILRLTWLYNDPEXTDYELIPE--GAQFNDAQVSR  182 (221)
T ss_dssp             -SCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SC--SEEEEEEECEEECCTTCCCCEEECT--TSCCCCCEEEH
T ss_pred             -CCcccccccccccccHHHHHHHHHHHHHHh-------CC--CCEEEEechhhcCCCCCcceeeccC--CccCCCceeeH
Confidence             12222          799999998877653       46  99999999999887 3322210000  00011124578


Q ss_pred             HHHHHHHHHHh--cCCCccCCCceeecc
Q 023054          228 PQGAATTCYVA--LHPNLKGVTGKYFLD  253 (288)
Q Consensus       228 ~~~a~~~~~l~--~~~~~~~~tG~~~~~  253 (288)
                      +|+|+.+++++  + +...++++.+...
T Consensus       183 ~dvA~~~~~l~~~~-~~~~~~~~~~~i~  209 (221)
T 3r6d_A          183 EAVVKAIFDILHAA-DETPFHRTSIGVG  209 (221)
T ss_dssp             HHHHHHHHHHHTCS-CCGGGTTEEEEEE
T ss_pred             HHHHHHHHHHHHhc-Chhhhhcceeeec
Confidence            99999999999  7 5566777765443

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.89  E-value=8.3e-23  Score=178.64  Aligned_cols=203  Identities=17%  Similarity=0.172  Sum_probs=157.3

Q ss_pred             CcccCCChhHHHHHHHHHHC-CC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR-KA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++ |+ +|++++|++.+.......+.    ..++.++.+|++|.+++.++++       ++|
T Consensus        25 lVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~-------~~D   93 (344)
T 2gn4_A           25 LITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALE-------GVD   93 (344)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHh-------cCC
Confidence            69999999999999999999 98 99999999887766655542    3568999999999988877664       689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+||.....  .......+.+++|+.++.++++++.+..         -++||++||..+.                
T Consensus        94 ~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~l~~aa~~~~---------v~~~V~~SS~~~~----------------  146 (344)
T 2gn4_A           94 ICIHAAALKHVP--IAEYNPLECIKTNIMGASNVINACLKNA---------ISQVIALSTDKAA----------------  146 (344)
T ss_dssp             EEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHTT---------CSEEEEECCGGGS----------------
T ss_pred             EEEECCCCCCCC--chhcCHHHHHHHHHHHHHHHHHHHHhCC---------CCEEEEecCCccC----------------
Confidence            999999976421  1123457899999999999999998642         3699999997643                


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh-------------hhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF-------------FLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-------------~~~~  225 (288)
                        .+...|+.||++++.+++.++++++..+  +++++|.||.+.++.....   ..+.+.+..             ..+.
T Consensus       147 --~p~~~Y~~sK~~~E~~~~~~~~~~~~~g--~~~~~vRpg~v~g~~~~~i---~~~~~~~~~g~~~~~i~~~~~~r~~i  219 (344)
T 2gn4_A          147 --NPINLYGATKLCSDKLFVSANNFKGSSQ--TQFSVVRYGNVVGSRGSVV---PFFKKLVQNKASEIPITDIRMTRFWI  219 (344)
T ss_dssp             --SCCSHHHHHHHHHHHHHHHGGGCCCSSC--CEEEEECCCEETTCTTSHH---HHHHHHHHHTCCCEEESCTTCEEEEE
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHhCCCC--cEEEEEEeccEECCCCCHH---HHHHHHHHcCCCceEEeCCCeEEeeE
Confidence              2457899999999999999998888778  9999999999998754321   122222111             1245


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      +++|+|+.+++++..+    ..|..|.
T Consensus       220 ~v~D~a~~v~~~l~~~----~~g~~~~  242 (344)
T 2gn4_A          220 TLDEGVSFVLKSLKRM----HGGEIFV  242 (344)
T ss_dssp             CHHHHHHHHHHHHHHC----CSSCEEE
T ss_pred             EHHHHHHHHHHHHhhc----cCCCEEe
Confidence            7899999999999632    2465554

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.89  E-value=3e-22  Score=175.97  Aligned_cols=233  Identities=14%  Similarity=0.122  Sum_probs=161.9

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChH--HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMA--AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||+|+||+++++.|+++ |++|++++|+..  ..+.+ ..+.   ...++.++.+|++|.+++.+++++.     ++
T Consensus         4 lVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (361)
T 1kew_A            4 LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCHHHHHHHHhhc-----CC
Confidence            69999999999999999998 799999998642  11111 1111   1346899999999999999888753     79


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC-C-----ccc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG-G-----IRF  151 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~-----~~~  151 (288)
                      |+||||||....  ..+.+++++.+++|+.++.++++++.+.|...+...+.+++||++||...+..... .     .+.
T Consensus        75 d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~  152 (361)
T 1kew_A           75 DAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTL  152 (361)
T ss_dssp             SEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCC
T ss_pred             CEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccC
Confidence            999999997532  22345678899999999999999999987431000000259999999764321110 0     001


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh----------
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF----------  221 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~----------  221 (288)
                      ..+++.....+...|+.+|++.+.+++.++.++   +  +++++|.||.+.++..........+......          
T Consensus       153 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (361)
T 1kew_A          153 PLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---G--LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (361)
T ss_dssp             CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTS
T ss_pred             CCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCC
Confidence            133444455677899999999999999998876   5  8999999999999876432222222222211          


Q ss_pred             ---hhcCChHHHHHHHHHHhcCCCccCCCceeecc
Q 023054          222 ---FLWKNVPQGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       222 ---~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                         ..+..++|+|+.+++++.. .   .+|+.|..
T Consensus       228 ~~~~~~i~v~Dva~a~~~~~~~-~---~~g~~~~v  258 (361)
T 1kew_A          228 DQIRDWLYVEDHARALHMVVTE-G---KAGETYNI  258 (361)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHH-C---CTTCEEEE
T ss_pred             ceeEeeEEHHHHHHHHHHHHhC-C---CCCCEEEe
Confidence               1234688999999999962 2   35765553

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.89  E-value=1.1e-22  Score=177.53  Aligned_cols=214  Identities=14%  Similarity=0.093  Sum_probs=154.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+.+....  ..+.......++.++.+|++|.+++.++++..     ++|+|
T Consensus         7 lVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~v   79 (345)
T 2z1m_A            7 LITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----QPDEV   79 (345)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence            699999999999999999999999999998754321  11222212346889999999999999988766     68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||....  ..+.++++..+++|+.++.++++++.+. ..       .++||++||...+...    ...++.+....
T Consensus        80 ih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-------~~~iv~~SS~~vyg~~----~~~~~~e~~~~  145 (345)
T 2z1m_A           80 YNLAAQSFV--GVSFEQPILTAEVDAIGVLRILEALRTV-KP-------DTKFYQASTSEMFGKV----QEIPQTEKTPF  145 (345)
T ss_dssp             EECCCCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT-------TCEEEEEEEGGGGCSC----SSSSBCTTSCC
T ss_pred             EECCCCcch--hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-------CceEEEEechhhcCCC----CCCCCCccCCC
Confidence            999997532  2245678899999999999999999752 11       2699999998654221    11233444455


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhc---ccCCceEEEEeeCCcccCCCCCCChHHHHHHHHH-------------H-hhh
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQ---EEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF-------------S-FFL  223 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~---~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~-------------~-~~~  223 (288)
                      .+...|+.+|++.+.+++.++.+++   ...  +.++.+.||...|.+....   .......             . ...
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~--r~~~~~gpg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  220 (345)
T 2z1m_A          146 YPRSPYAVAKLFGHWITVNYREAYNMFACSG--ILFNHESPLRGIEFVTRKI---TYSLARIKYGLQDKLVLGNLNAKRD  220 (345)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEE--EECCEECTTSCTTSHHHHH---HHHHHHHHTTSCSCEEESCTTCEEC
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEee--eeeeecCCCCCCcchhHHH---HHHHHHHHcCCCCeeeeCCCCceee
Confidence            6778899999999999999999876   333  5678888998777653211   1111100             0 011


Q ss_pred             cCChHHHHHHHHHHhcC
Q 023054          224 WKNVPQGAATTCYVALH  240 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~  240 (288)
                      +..++|+|+.+++++..
T Consensus       221 ~~~v~Dva~a~~~~~~~  237 (345)
T 2z1m_A          221 WGYAPEYVEAMWLMMQQ  237 (345)
T ss_dssp             CEEHHHHHHHHHHHHTS
T ss_pred             eEEHHHHHHHHHHHHhC
Confidence            45789999999999964

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.89  E-value=1.6e-22  Score=176.31  Aligned_cols=180  Identities=20%  Similarity=0.101  Sum_probs=138.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+.+...+..+.+.... +.++.++.+|++|.+++.++++.     .++|+|
T Consensus         9 lVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~v   82 (341)
T 3enk_A            9 LVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA-----HPITAA   82 (341)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH-----SCCCEE
T ss_pred             EEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc-----cCCcEE
Confidence            699999999999999999999999999998766555555554432 35689999999999999998875     379999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||.....  ...+...+.+++|+.++..+++++.    +.+     .++||++||...+..    ....++++....
T Consensus        83 ih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-----~~~iv~~SS~~~~g~----~~~~~~~e~~~~  147 (341)
T 3enk_A           83 IHFAALKAVG--ESVAKPIEYYRNNLDSLLSLLRVMR----ERA-----VKRIVFSSSATVYGV----PERSPIDETFPL  147 (341)
T ss_dssp             EECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHH----HTT-----CCEEEEEEEGGGBCS----CSSSSBCTTSCC
T ss_pred             EECccccccC--ccccChHHHHHHHHHHHHHHHHHHH----hCC-----CCEEEEEecceEecC----CCCCCCCCCCCC
Confidence            9999976431  1224456789999999998877653    332     469999999765421    112234444555


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                      .+...|+.+|.+.+.+++.++.++.  +  ++++++.||.+..+.
T Consensus       148 ~~~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          148 SATNPYGQTKLMAEQILRDVEAADP--S--WRVATLRYFNPVGAH  188 (341)
T ss_dssp             BCSSHHHHHHHHHHHHHHHHHHHCT--T--CEEEEEEECEEECCC
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCC--C--ceEEEEeeccccCCc
Confidence            6678899999999999999998875  4  889999999987663

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.89  E-value=1.3e-23  Score=174.68  Aligned_cols=184  Identities=13%  Similarity=0.031  Sum_probs=138.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+||||++++++|+++|+  +|++++|+++..+...        ..++.++.+|++|.+++.++++       ++|
T Consensus        22 lVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~-------~~d   86 (242)
T 2bka_A           22 FILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQ-------GHD   86 (242)
T ss_dssp             EEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGS-------SCS
T ss_pred             EEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhc-------CCC
Confidence            6999999999999999999999  9999999875432211        1257889999999888776653       799


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||||||....     .++++..+++|+.++..+++++.+    ..     .++||++||..+..               
T Consensus        87 ~vi~~ag~~~~-----~~~~~~~~~~n~~~~~~~~~~~~~----~~-----~~~iv~~SS~~~~~---------------  137 (242)
T 2bka_A           87 VGFCCLGTTRG-----KAGAEGFVRVDRDYVLKSAELAKA----GG-----CKHFNLLSSKGADK---------------  137 (242)
T ss_dssp             EEEECCCCCHH-----HHHHHHHHHHHTHHHHHHHHHHHH----TT-----CCEEEEECCTTCCT---------------
T ss_pred             EEEECCCcccc-----cCCcccceeeeHHHHHHHHHHHHH----CC-----CCEEEEEccCcCCC---------------
Confidence            99999997532     124678899999999988887543    22     46999999987642               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCce-EEEEeeCCcccCCCCCCChHHHHHHHH----HH----hhhcCChHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNI-TANSVHPGLIMTNLFKHSAVVMRFLKF----FS----FFLWKNVPQ  229 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i-~v~~v~PG~v~t~~~~~~~~~~~~~~~----~~----~~~~~~~~~  229 (288)
                        ++...|+.+|++++.+++.+       +  + ++++|.||++.|+..... ........    .+    ...+.+++|
T Consensus       138 --~~~~~Y~~sK~~~e~~~~~~-------~--~~~~~~vrpg~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d  205 (242)
T 2bka_A          138 --SSNFLYLQVKGEVEAKVEEL-------K--FDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASGHSVPVVT  205 (242)
T ss_dssp             --TCSSHHHHHHHHHHHHHHTT-------C--CSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGGTEEEHHH
T ss_pred             --CCcchHHHHHHHHHHHHHhc-------C--CCCeEEEcCceecCCCCCCc-HHHHHHHHhhcccCccccCCcccCHHH
Confidence              23467999999999887653       3  6 799999999999875432 11111111    12    334568999


Q ss_pred             HHHHHHHHhcC
Q 023054          230 GAATTCYVALH  240 (288)
Q Consensus       230 ~a~~~~~l~~~  240 (288)
                      +|+.+++++++
T Consensus       206 va~~~~~~~~~  216 (242)
T 2bka_A          206 VVRAMLNNVVR  216 (242)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHhC
Confidence            99999999973

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.88  E-value=1e-21  Score=170.89  Aligned_cols=218  Identities=15%  Similarity=0.124  Sum_probs=155.9

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChH--HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMA--AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||+|+||++++++|+++|  ++|++++|+..  ..+.+ ..+.   ...++.++.+|++|.+++.+++.       +
T Consensus         7 lVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (336)
T 2hun_A            7 LVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE---DDPRYTFVKGDVADYELVKELVR-------K   75 (336)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHH-------T
T ss_pred             EEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc---cCCceEEEEcCCCCHHHHHHHhh-------C
Confidence            699999999999999999997  89999998642  11111 1111   13468999999999998888772       7


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +|+||||||....  ..+.++++..+++|+.++..+++++.+.  ..      .++||++||...+....    ..++++
T Consensus        76 ~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~~------~~~iv~~SS~~vyg~~~----~~~~~E  141 (336)
T 2hun_A           76 VDGVVHLAAESHV--DRSISSPEIFLHSNVIGTYTLLESIRRE--NP------EVRFVHVSTDEVYGDIL----KGSFTE  141 (336)
T ss_dssp             CSEEEECCCCCCH--HHHHHCTHHHHHHHHHHHHHHHHHHHHH--CT------TSEEEEEEEGGGGCCCS----SSCBCT
T ss_pred             CCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CC------CcEEEEeccHHHHCCCC----CCCcCC
Confidence            9999999997532  1233567889999999999999999876  11      36999999976442111    123344


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh-------------hh
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF-------------FL  223 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-------------~~  223 (288)
                      .....+...|+.+|++.+.+++.++.++   +  ++++++.||.+.++..........+......             ..
T Consensus       142 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (336)
T 2hun_A          142 NDRLMPSSPYSATKAASDMLVLGWTRTY---N--LNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRD  216 (336)
T ss_dssp             TBCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEE
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceee
Confidence            4455667889999999999999998875   5  9999999999999875432222222222211             22


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      +..++|+|+.+++++.. .   .+|+.|.
T Consensus       217 ~i~v~Dva~~~~~~~~~-~---~~g~~~~  241 (336)
T 2hun_A          217 WLYVEDHVRAIELVLLK-G---ESREIYN  241 (336)
T ss_dssp             EEEHHHHHHHHHHHHHH-C---CTTCEEE
T ss_pred             eEEHHHHHHHHHHHHhC-C---CCCCEEE
Confidence            34689999999999962 2   2565444

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.88  E-value=1.5e-21  Score=171.03  Aligned_cols=223  Identities=14%  Similarity=0.078  Sum_probs=157.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH----HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA----AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||+|+||+++++.|+++|++|++++|+..    .++.+.+.+... ...++.++.+|++|.+++.++++       +
T Consensus        31 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~  102 (352)
T 1sb8_A           31 LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK-QWSNFKFIQGDIRNLDDCNNACA-------G  102 (352)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH-HHTTEEEEECCTTSHHHHHHHHT-------T
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc-cCCceEEEECCCCCHHHHHHHhc-------C
Confidence            69999999999999999999999999999653    333332222110 02468899999999988887765       7


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +|+|||+||.....  .+.++++..+++|+.++..+++++.+.    +     .++||++||...+.....    .++++
T Consensus       103 ~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~~v~~SS~~~~~~~~~----~~~~E  167 (352)
T 1sb8_A          103 VDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDA----K-----VQSFTYAASSSTYGDHPG----LPKVE  167 (352)
T ss_dssp             CSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-----CSEEEEEEEGGGGTTCCC----SSBCT
T ss_pred             CCEEEECCcccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEeccHHhcCCCCC----CCCCC
Confidence            99999999975321  133567889999999999999988653    1     469999999876543211    12333


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHh-----------
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSF-----------  221 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~-----------  221 (288)
                      .....+...|+.+|++.+.+++.++.++   +  ++++++.||.+.++.....    .....+......           
T Consensus       168 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  242 (352)
T 1sb8_A          168 DTIGKPLSPYAVTKYVNELYADVFSRCY---G--FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGE  242 (352)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSC
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCC
Confidence            3344566789999999999999998876   5  8899999999988865432    122222222211           


Q ss_pred             --hhcCChHHHHHHHHHHhcCCCccCCCceeecc
Q 023054          222 --FLWKNVPQGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       222 --~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                        ..+..++|+|+.+++++..  .....|..|+.
T Consensus       243 ~~~~~i~v~Dva~a~~~~~~~--~~~~~~~~~ni  274 (352)
T 1sb8_A          243 TSRDFCYIENTVQANLLAATA--GLDARNQVYNI  274 (352)
T ss_dssp             CEECCEEHHHHHHHHHHHHTC--CGGGCSEEEEE
T ss_pred             ceEeeEEHHHHHHHHHHHHhc--cccCCCceEEe
Confidence              1234688999999999963  12334555543

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.87  E-value=6.5e-22  Score=170.38  Aligned_cols=215  Identities=15%  Similarity=0.104  Sum_probs=155.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+.....+..        ...+.++.+|++|.+ +.++++       . |+|
T Consensus         4 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-d~v   66 (312)
T 3ko8_A            4 VVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-DVV   66 (312)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-SEE
T ss_pred             EEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-CEE
Confidence            69999999999999999999999999999765422211        346889999999976 544332       3 999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+....  ..+.++++..+++|+.++.++++++...    +     .++||++||...+..    ....++++....
T Consensus        67 ih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~iv~~SS~~vyg~----~~~~~~~e~~~~  131 (312)
T 3ko8_A           67 FHFAANPEV--RLSTTEPIVHFNENVVATFNVLEWARQT----G-----VRTVVFASSSTVYGD----ADVIPTPEEEPY  131 (312)
T ss_dssp             EECCSSCSS--SGGGSCHHHHHHHHHHHHHHHHHHHHHH----T-----CCEEEEEEEGGGGCS----CSSSSBCTTSCC
T ss_pred             EECCCCCCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEeCcHHHhCC----CCCCCCCCCCCC
Confidence            999996432  3455778899999999999999988432    1     359999999776532    122334455566


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh--------------hhcCC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF--------------FLWKN  226 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--------------~~~~~  226 (288)
                      .+...|+.+|.+.+.+++.++.++   +  ++++++.||.+.++..... ....+......              ..+..
T Consensus       132 ~p~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~~lrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  205 (312)
T 3ko8_A          132 KPISVYGAAKAAGEVMCATYARLF---G--VRCLAVRYANVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGTQRKSYLY  205 (312)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCSS-HHHHHHHHHHHCTTEEEEC----CEECEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccccCcCCCCC-hHHHHHHHHHhCCCCeEEcCCCCeEEeeEE
Confidence            678899999999999999999887   5  9999999999999875543 22222222211              11234


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeecc
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                      ++|+|+.+++++..+......|..|+.
T Consensus       206 v~Dva~a~~~~~~~~~~~~~~~~~~ni  232 (312)
T 3ko8_A          206 VRDAVEATLAAWKKFEEMDAPFLALNV  232 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred             HHHHHHHHHHHHHhccccCCCCcEEEE
Confidence            889999999999742223345665553

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.87  E-value=3.4e-21  Score=169.09  Aligned_cols=216  Identities=14%  Similarity=0.097  Sum_probs=157.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+..........+.   ...++.++.+|++|.+++.++++..     ++|+|
T Consensus        13 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~v   84 (357)
T 1rkx_A           13 FVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF-----QPEIV   84 (357)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhc-----CCCEE
Confidence            699999999999999999999999999998765443333332   1356889999999999999888765     69999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||....  ..+.++++..+++|+.++..+++++.+.  . .     .++||++||...+.....   ...+.+....
T Consensus        85 ih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~-~-----~~~~v~~SS~~vyg~~~~---~~~~~E~~~~  151 (357)
T 1rkx_A           85 FHMAAQPLV--RLSYSEPVETYSTNVMGTVYLLEAIRHV--G-G-----VKAVVNITSDKCYDNKEW---IWGYRENEAM  151 (357)
T ss_dssp             EECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH--C-C-----CCEEEEECCGGGBCCCCS---SSCBCTTSCB
T ss_pred             EECCCCccc--ccchhCHHHHHHHHHHHHHHHHHHHHHh--C-C-----CCeEEEecCHHHhCCCCc---CCCCCCCCCC
Confidence            999996321  2234567889999999999999998763  1 1     369999999875432111   0122333344


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhc------ccCCceEEEEeeCCcccCCCCCC-ChHHHHHHHHHHh------------
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQ------EEGVNITANSVHPGLIMTNLFKH-SAVVMRFLKFFSF------------  221 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~------~~~~~i~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~------------  221 (288)
                      .+...|+.+|.+.+.+++.++.++.      ..+  ++++++.||.+.++.... ......+.+....            
T Consensus       152 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~g--i~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  229 (357)
T 1rkx_A          152 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAI  229 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCC--ceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCe
Confidence            5677899999999999999999885      446  999999999999875421 1122333322211            


Q ss_pred             hhcCChHHHHHHHHHHhc
Q 023054          222 FLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~  239 (288)
                      ..+...+|+|+.++.++.
T Consensus       230 ~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          230 RPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             ECCEETHHHHHHHHHHHH
T ss_pred             eccEeHHHHHHHHHHHHH
Confidence            123467799999999885

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.86  E-value=2.9e-20  Score=165.69  Aligned_cols=187  Identities=16%  Similarity=0.125  Sum_probs=133.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHH----------------HHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANE----------------ARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |||||+|.||++++++|+++|++|++++|+......                ....+.... ..++.++.+|++|.+++.
T Consensus        15 lVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl~d~~~~~   93 (404)
T 1i24_A           15 MVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDFEFLA   93 (404)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSHHHHH
T ss_pred             EEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCCCCHHHHH
Confidence            699999999999999999999999999987543211                111111111 356889999999999999


Q ss_pred             HHHHHHHhcCCCcceEEEccccCCCCC-CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           65 DFAQNFIALNLPLNILINNAGIMFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                      ++++..     ++|+||||||...... ..+++.+...+++|+.++..+++++.+...        ..+||++||...+.
T Consensus        94 ~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--------~~~~V~~SS~~vyg  160 (404)
T 1i24_A           94 ESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE--------ECHLVKLGTMGEYG  160 (404)
T ss_dssp             HHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEECCGGGGC
T ss_pred             HHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCC--------CcEEEEeCcHHHhC
Confidence            888765     6999999999754321 123344567899999999999998865310        14999999976543


Q ss_pred             cccCCccccCCCC---------CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCC
Q 023054          144 TYKGGIRFQKIND---------RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLF  206 (288)
Q Consensus       144 ~~~~~~~~~~~~~---------~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~  206 (288)
                      ..........+..         .....+...|+.||++.+.+++.++.++   +  +++++|.||.+.++..
T Consensus       161 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          161 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVVYGVKT  227 (404)
T ss_dssp             CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECSCC
T ss_pred             CCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---C--CeEEEEecceeeCCCC
Confidence            2111111000000         0234456789999999999999988876   5  9999999999988754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.86  E-value=7.5e-21  Score=166.19  Aligned_cols=220  Identities=16%  Similarity=0.130  Sum_probs=155.2

Q ss_pred             CcccCCChhHHHHHHHHHHC--CCEEEEEeCChHHH-HHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALR--KAHVIIAARNMAAA-NEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~--G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||+|+||++++++|+++  |++|++++|+.... .+.   +... ...++.++.+|++|.+++.++++       .+
T Consensus         8 lVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~~   76 (348)
T 1oc2_A            8 IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN---LEAI-LGDRVELVVGDIADAELVDKLAA-------KA   76 (348)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---TGGG-CSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             EEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhH---Hhhh-ccCCeEEEECCCCCHHHHHHHhh-------cC
Confidence            69999999999999999999  89999999864210 011   1111 13568999999999988887765       46


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC--------Cc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG--------GI  149 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~--------~~  149 (288)
                      |+||||||....  ..+.++++..+++|+.++..+++++.+.          +++||++||...+.....        ..
T Consensus        77 d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----------~~~~v~~SS~~vyg~~~~~~~~~~~~~~  144 (348)
T 1oc2_A           77 DAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGHGEG  144 (348)
T ss_dssp             SEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred             CEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh----------CCeEEEecccceeCCCcccccccccccc
Confidence            999999997532  1233567889999999999999999764          249999999765422110        00


Q ss_pred             cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh--------
Q 023054          150 RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF--------  221 (288)
Q Consensus       150 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--------  221 (288)
                      ....+++.....+...|+.+|++.+.+++.++.++   +  ++++++.||.+.++..........+......        
T Consensus       145 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (348)
T 1oc2_A          145 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYG  219 (348)
T ss_dssp             TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEET
T ss_pred             cCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEec
Confidence            01234444455677889999999999999998876   5  9999999999998876432222222222211        


Q ss_pred             -----hhcCChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          222 -----FLWKNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       222 -----~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                           ..+..++|+|+.+++++..+    .+|+.|.
T Consensus       220 ~~~~~~~~i~v~Dva~~~~~~~~~~----~~g~~~~  251 (348)
T 1oc2_A          220 EGKNVRDWIHTNDHSTGVWAILTKG----RMGETYL  251 (348)
T ss_dssp             TSCCEEECEEHHHHHHHHHHHHHHC----CTTCEEE
T ss_pred             CCCceEeeEEHHHHHHHHHHHhhCC----CCCCeEE
Confidence                 12346889999999999632    2565444

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.86  E-value=4.8e-21  Score=166.79  Aligned_cols=223  Identities=15%  Similarity=0.101  Sum_probs=149.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC-CCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED-DTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++|++|+++.|+.+..++... +.... ...++.++.+|++|.+++.++++       ++|+
T Consensus         9 lVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   80 (337)
T 2c29_D            9 CVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK-------GCTG   80 (337)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT-------TCSE
T ss_pred             EEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc-------CCCE
Confidence            699999999999999999999999999998764332221 11110 01358899999999988877764       5899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||+|+....   ...+..++.+++|+.++.++++++.+..   .     .++||++||..+....+...  ..+++...
T Consensus        81 Vih~A~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~~~---~-----~~riV~~SS~~~~~~~~~~~--~~~~E~~~  147 (337)
T 2c29_D           81 VFHVATPMDF---ESKDPENEVIKPTIEGMLGIMKSCAAAK---T-----VRRLVFTSSAGTVNIQEHQL--PVYDESCW  147 (337)
T ss_dssp             EEECCCCCCS---SCSSHHHHTHHHHHHHHHHHHHHHHHHS---C-----CCEEEEECCGGGTSCSSSCC--SEECTTCC
T ss_pred             EEEeccccCC---CCCChHHHHHHHHHHHHHHHHHHHHhCC---C-----ccEEEEeeeHhhcccCCCCC--cccCcccC
Confidence            9999986421   1122335689999999999999987642   0     25999999988654321110  01111110


Q ss_pred             ---------CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-h-HHHHH---H-------HH
Q 023054          160 ---------YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-A-VVMRF---L-------KF  218 (288)
Q Consensus       160 ---------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~-~~~~~---~-------~~  218 (288)
                               .++...|+.||.+.+.+++.++++   .+  ++++++.||.+.++..... . .....   .       ..
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g--i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~  222 (337)
T 2c29_D          148 SDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NN--IDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSI  222 (337)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HT--CCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHH
T ss_pred             CchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cC--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccc
Confidence                     012346999999999888776654   35  9999999999998875432 1 11111   0       00


Q ss_pred             HHhhhcCChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          219 FSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       219 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      .+...+..++|+|+++++++..+   ...|.|+.
T Consensus       223 ~~~~~~i~v~Dva~a~~~~~~~~---~~~~~~~~  253 (337)
T 2c29_D          223 IRQGQFVHLDDLCNAHIYLFENP---KAEGRYIC  253 (337)
T ss_dssp             HTEEEEEEHHHHHHHHHHHHHCT---TCCEEEEE
T ss_pred             cCCCCEEEHHHHHHHHHHHhcCc---ccCceEEE
Confidence            11123678999999999999632   23566654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.86  E-value=1.9e-21  Score=164.03  Aligned_cols=189  Identities=19%  Similarity=0.147  Sum_probs=145.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+.....           ..++.++.+|++|.+++.++++       ++|+|
T Consensus         6 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   67 (267)
T 3ay3_A            6 LVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK-------DCDGI   67 (267)
T ss_dssp             EEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc-------CCCEE
Confidence            69999999999999999999999999999864210           1347889999999988887765       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||..      ..+.++..+++|+.++..+++++.+.    +     .++||++||...+...+.   ..++++....
T Consensus        68 i~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~iv~~SS~~~~~~~~~---~~~~~E~~~~  129 (267)
T 3ay3_A           68 IHLGGVS------VERPWNDILQANIIGAYNLYEAARNL----G-----KPRIVFASSNHTIGYYPR---TTRIDTEVPR  129 (267)
T ss_dssp             EECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHHT----T-----CCEEEEEEEGGGSTTSBT---TSCBCTTSCC
T ss_pred             EECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHHh----C-----CCEEEEeCCHHHhCCCCC---CCCCCCCCCC
Confidence            9999975      34567889999999999999988642    1     469999999876543221   1233444445


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcc-cCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhc
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLI-MTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  239 (288)
                      .+...|+.+|++++.+++.++.+   .+  ++++++.||.+ .++...           .....+.+++|+|+.++.++.
T Consensus       130 ~~~~~Y~~sK~~~e~~~~~~~~~---~g--i~~~~lrp~~v~~~~~~~-----------~~~~~~~~~~dva~~~~~~~~  193 (267)
T 3ay3_A          130 RPDSLYGLSKCFGEDLASLYYHK---FD--IETLNIRIGSCFPKPKDA-----------RMMATWLSVDDFMRLMKRAFV  193 (267)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHT---TC--CCEEEEEECBCSSSCCSH-----------HHHHHBCCHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHH---cC--CCEEEEeceeecCCCCCC-----------CeeeccccHHHHHHHHHHHHh
Confidence            56688999999999999887643   45  99999999998 444211           012345789999999999997


Q ss_pred             CC
Q 023054          240 HP  241 (288)
Q Consensus       240 ~~  241 (288)
                      .+
T Consensus       194 ~~  195 (267)
T 3ay3_A          194 AP  195 (267)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.86  E-value=4.9e-22  Score=162.70  Aligned_cols=192  Identities=16%  Similarity=0.145  Sum_probs=141.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC-hHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++|++|++++|+.+..+.          ..++.++.+|++| .+++.++++       ++|+
T Consensus         4 lItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~-------~~d~   66 (219)
T 3dqp_A            4 FIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ----------YNNVKAVHFDVDWTPEEMAKQLH-------GMDA   66 (219)
T ss_dssp             EEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC----------CTTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh----------cCCceEEEecccCCHHHHHHHHc-------CCCE
Confidence            699999999999999999999999999999765332          1468999999999 887776654       6999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ||||||...          .+.+++|+.++..+++++..    .+     .++||++||..+....+.       .+ ..
T Consensus        67 vi~~ag~~~----------~~~~~~n~~~~~~l~~a~~~----~~-----~~~iv~~SS~~~~~~~~~-------~e-~~  119 (219)
T 3dqp_A           67 IINVSGSGG----------KSLLKVDLYGAVKLMQAAEK----AE-----VKRFILLSTIFSLQPEKW-------IG-AG  119 (219)
T ss_dssp             EEECCCCTT----------SSCCCCCCHHHHHHHHHHHH----TT-----CCEEEEECCTTTTCGGGC-------CS-HH
T ss_pred             EEECCcCCC----------CCcEeEeHHHHHHHHHHHHH----hC-----CCEEEEECcccccCCCcc-------cc-cc
Confidence            999999764          23788999999998888742    22     369999999876542111       00 11


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhc
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  239 (288)
                      ..+...|+.+|.+.+.+++      ...+  ++++++.||++.++.....-...     .....+.+++|+|+.+++++.
T Consensus       120 ~~~~~~Y~~sK~~~e~~~~------~~~~--i~~~ilrp~~v~g~~~~~~~~~~-----~~~~~~i~~~Dva~~i~~~l~  186 (219)
T 3dqp_A          120 FDALKDYYIAKHFADLYLT------KETN--LDYTIIQPGALTEEEATGLIDIN-----DEVSASNTIGDVADTIKELVM  186 (219)
T ss_dssp             HHHTHHHHHHHHHHHHHHH------HSCC--CEEEEEEECSEECSCCCSEEEES-----SSCCCCEEHHHHHHHHHHHHT
T ss_pred             cccccHHHHHHHHHHHHHH------hccC--CcEEEEeCceEecCCCCCccccC-----CCcCCcccHHHHHHHHHHHHh
Confidence            2236789999999888776      3456  99999999999887544321100     122334589999999999997


Q ss_pred             CCCccCCCceeec
Q 023054          240 HPNLKGVTGKYFL  252 (288)
Q Consensus       240 ~~~~~~~tG~~~~  252 (288)
                      ++.   ..|+.|.
T Consensus       187 ~~~---~~g~~~~  196 (219)
T 3dqp_A          187 TDH---SIGKVIS  196 (219)
T ss_dssp             CGG---GTTEEEE
T ss_pred             Ccc---ccCcEEE
Confidence            432   2366555

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.86  E-value=1.5e-21  Score=162.84  Aligned_cols=207  Identities=11%  Similarity=-0.037  Sum_probs=142.3

Q ss_pred             CcccCCChhHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR--KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++  |++|++++|+++..++.         ..++.++.+|++|.+++.++++       ++|
T Consensus         8 lVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~-------~~d   71 (253)
T 1xq6_A            8 LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ-------GID   71 (253)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT-------TCS
T ss_pred             EEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCHHHHHHHHc-------CCC
Confidence            69999999999999999999  89999999998665432         2457889999999998888775       589


Q ss_pred             eEEEccccCCCC-----------CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC
Q 023054           79 ILINNAGIMFCP-----------YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG  147 (288)
Q Consensus        79 ~lv~~ag~~~~~-----------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  147 (288)
                      +||||||.....           .....+.+++.+++|+.++..+++++...    +     .++||++||..+.....+
T Consensus        72 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~iv~~SS~~~~~~~~~  142 (253)
T 1xq6_A           72 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G-----VKHIVVVGSMGGTNPDHP  142 (253)
T ss_dssp             EEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T-----CSEEEEEEETTTTCTTCG
T ss_pred             EEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C-----CCEEEEEcCccCCCCCCc
Confidence            999999975321           11122445578899999999988877542    2     469999999875431000


Q ss_pred             CccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHH--HhhhcC
Q 023054          148 GIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF--SFFLWK  225 (288)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~--~~~~~~  225 (288)
                               . .......|+.+|.+++.+++.       .+  +++++|.||++.++..............+  ....+.
T Consensus       143 ---------~-~~~~~~~y~~sK~~~e~~~~~-------~~--i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
T 1xq6_A          143 ---------L-NKLGNGNILVWKRKAEQYLAD-------SG--TPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTV  203 (253)
T ss_dssp             ---------G-GGGGGCCHHHHHHHHHHHHHT-------SS--SCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEE
T ss_pred             ---------c-ccccchhHHHHHHHHHHHHHh-------CC--CceEEEecceeecCCcchhhhhccCCcCCcCCCCcEE
Confidence                     0 000113467799998887652       46  99999999999887643210000000000  112356


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +++|+|+.+++++.++.   .+|+.|..+
T Consensus       204 ~~~Dva~~~~~~~~~~~---~~g~~~~i~  229 (253)
T 1xq6_A          204 PRADVAEVCIQALLFEE---AKNKAFDLG  229 (253)
T ss_dssp             EHHHHHHHHHHHTTCGG---GTTEEEEEE
T ss_pred             cHHHHHHHHHHHHcCcc---ccCCEEEec
Confidence            89999999999996322   357656533

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.85  E-value=8.4e-21  Score=165.43  Aligned_cols=201  Identities=14%  Similarity=0.095  Sum_probs=140.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+....+.    +.    ..++.++.+|++|.+++.++++       ++|+|
T Consensus        17 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   81 (342)
T 2x4g_A           17 AVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LA----YLEPECRVAEMLDHAGLERALR-------GLDGV   81 (342)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GG----GGCCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hc----cCCeEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            699999999999999999999999999998754322    11    1257899999999988877664       68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+||...    ...+++++.+++|+.++..+++++.+.    +     .++||++||...+...+...   ..++....
T Consensus        82 ih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~~v~~SS~~~~~~~~~~~---~~~E~~~~  145 (342)
T 2x4g_A           82 IFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQA----R-----VPRILYVGSAYAMPRHPQGL---PGHEGLFY  145 (342)
T ss_dssp             EEC----------------CHHHHHHHHHHHHHHHHHHH----T-----CSCEEEECCGGGSCCCTTSS---CBCTTCCC
T ss_pred             EECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-----CCeEEEECCHHhhCcCCCCC---CCCCCCCC
Confidence            99999753    234567889999999999999999764    1     36999999987654322210   11233333


Q ss_pred             Cc----cccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCC-CCChHHHHHHHHHHh----------hhcC
Q 023054          161 SD----KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLF-KHSAVVMRFLKFFSF----------FLWK  225 (288)
Q Consensus       161 ~~----~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~-~~~~~~~~~~~~~~~----------~~~~  225 (288)
                      .+    ...|+.+|.+.+.+++.++.   . +  ++++++.||.+.++.. ...  ...+...+..          ..+.
T Consensus       146 ~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g--~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i  217 (342)
T 2x4g_A          146 DSLPSGKSSYVLCKWALDEQAREQAR---N-G--LPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRNVI  217 (342)
T ss_dssp             SSCCTTSCHHHHHHHHHHHHHHHHHH---T-T--CCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEEEE
T ss_pred             CccccccChHHHHHHHHHHHHHHHhh---c-C--CcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCccee
Confidence            34    67899999999999998876   2 5  9999999999998865 211  1112222111          1145


Q ss_pred             ChHHHHHHHHHHhcC
Q 023054          226 NVPQGAATTCYVALH  240 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~  240 (288)
                      .++|+|+.+++++..
T Consensus       218 ~v~Dva~~~~~~~~~  232 (342)
T 2x4g_A          218 DAAEAGRGLLMALER  232 (342)
T ss_dssp             EHHHHHHHHHHHHHH
T ss_pred             eHHHHHHHHHHHHhC
Confidence            789999999999963

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.85  E-value=9.5e-21  Score=164.87  Aligned_cols=210  Identities=18%  Similarity=0.150  Sum_probs=149.7

Q ss_pred             CcccCCChhHHHHHHHHHHC---C---CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            1 MLAGGASGIGLETARVLALR---K---AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~---G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      |||||+|+||++++++|+++   |   ++|++++|+.....  ...+.......++.++.+|++|.+++.+++       
T Consensus         4 lVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------   74 (337)
T 1r6d_A            4 LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLAREL-------   74 (337)
T ss_dssp             EEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------
T ss_pred             EEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc--hhhhhhcccCCCeEEEEcCCCCHHHHHHHh-------
Confidence            69999999999999999997   8   99999998642100  001111111356899999999998887765       


Q ss_pred             CCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           75 LPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      .++|+|||+||....  ..+.++++..+++|+.++..+++++.+..         .++||++||...+....    ..++
T Consensus        75 ~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~---------~~~~v~~SS~~vyg~~~----~~~~  139 (337)
T 1r6d_A           75 RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDAG---------VGRVVHVSTNQVYGSID----SGSW  139 (337)
T ss_dssp             TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHTT---------CCEEEEEEEGGGGCCCS----SSCB
T ss_pred             cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEecchHHhCCCC----CCCC
Confidence            479999999997532  12335678899999999999999987642         35999999986543211    1233


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh-------------
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF-------------  221 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-------------  221 (288)
                      ++.....+...|+.+|.+.+.+++.++.++   +  ++++.+.||.+.++..........+......             
T Consensus       140 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (337)
T 1r6d_A          140 TESSPLEPNSPYAASKAGSDLVARAYHRTY---G--LDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANV  214 (337)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCE
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCee
Confidence            444455667889999999999999988875   4  8899999999988875432222222222211             


Q ss_pred             hhcCChHHHHHHHHHHhc
Q 023054          222 FLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~  239 (288)
                      ..+..++|+|+.+++++.
T Consensus       215 ~~~i~v~Dva~a~~~~~~  232 (337)
T 1r6d_A          215 REWVHTDDHCRGIALVLA  232 (337)
T ss_dssp             EEEEEHHHHHHHHHHHHH
T ss_pred             EeeEeHHHHHHHHHHHHh
Confidence            123367899999999996

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.85  E-value=4.9e-21  Score=164.90  Aligned_cols=208  Identities=17%  Similarity=0.127  Sum_probs=147.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|......+   .+     ..++.++.+|++|.+++.++++..     ++|+|
T Consensus         4 lVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-----~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~v   70 (311)
T 2p5y_A            4 LVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-----PKGVPFFRVDLRDKEGVERAFREF-----RPTHV   70 (311)
T ss_dssp             EEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-----CTTCCEECCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-----ccCeEEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence            699999999999999999999999999985321110   01     135778899999999998887653     68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+....  ..+.++++..+++|+.+++.+++++..    ..     .++||++||..+.++..  ....+.++....
T Consensus        71 i~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~-----~~~iv~~SS~~~~~g~~--~~~~~~~E~~~~  137 (311)
T 2p5y_A           71 SHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQ----YG-----VEKLVFASTGGAIYGEV--PEGERAEETWPP  137 (311)
T ss_dssp             EECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-----CSEEEEEEEHHHHHCCC--CTTCCBCTTSCC
T ss_pred             EECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC-----CCEEEEeCCChhhcCCC--CCCCCcCCCCCC
Confidence            999997532  123456788999999999999998753    21     36999999984433210  001122333334


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHHHh----------------
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFFSF----------------  221 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~----------------  221 (288)
                      .+...|+.||++.+.+++.++.++   +  ++++++.||.+.++.....   .....+.+....                
T Consensus       138 ~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  212 (311)
T 2p5y_A          138 RPKSPYAASKAAFEHYLSVYGQSY---G--LKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEG  212 (311)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCC
Confidence            456789999999999999998775   5  8899999999988865432   122222222111                


Q ss_pred             --hhcCChHHHHHHHHHHhc
Q 023054          222 --FLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       222 --~~~~~~~~~a~~~~~l~~  239 (288)
                        ..+..++|+|+.+++++.
T Consensus       213 ~~~~~i~v~Dva~a~~~~~~  232 (311)
T 2p5y_A          213 CVRDYVYVGDVAEAHALALF  232 (311)
T ss_dssp             CEECEEEHHHHHHHHHHHHH
T ss_pred             eEEeeEEHHHHHHHHHHHHh
Confidence              012357899999999996

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.85  E-value=1.4e-20  Score=164.72  Aligned_cols=224  Identities=12%  Similarity=0.019  Sum_probs=158.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCC---CCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDD---TARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||+|+||+++++.|+++|++|++++|+..........+....+   ..++.++.+|++|.+++.++++       ++
T Consensus        29 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~  101 (351)
T 3ruf_A           29 LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-------GV  101 (351)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-------CC
Confidence            6999999999999999999999999999965443333333333211   1568999999999988877765       79


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |+|||+||.....  ...+++...+++|+.++..+++++...    +     ..+||++||...+....    ..++++.
T Consensus       102 d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-----~~~~v~~SS~~vyg~~~----~~~~~E~  166 (351)
T 3ruf_A          102 DHVLHQAALGSVP--RSIVDPITTNATNITGFLNILHAAKNA----Q-----VQSFTYAASSSTYGDHP----ALPKVEE  166 (351)
T ss_dssp             SEEEECCCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-----CSEEEEEEEGGGGTTCC----CSSBCTT
T ss_pred             CEEEECCccCCcc--hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEEecHHhcCCCC----CCCCccC
Confidence            9999999975321  233556789999999999999987543    1     35999999987653211    1234444


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhh-----------
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFF-----------  222 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~-----------  222 (288)
                      ....+...|+.+|.+.+.+++.++.+.   +  ++++.+.||.+..+.....    .....+.......           
T Consensus       167 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  241 (351)
T 3ruf_A          167 NIGNPLSPYAVTKYVNEIYAQVYARTY---G--FKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGET  241 (351)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCe
Confidence            445667889999999999999988876   4  8889999999987754332    1222322222111           


Q ss_pred             --hcCChHHHHHHHHHHhcCCCccCCCceeecc
Q 023054          223 --LWKNVPQGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       223 --~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                        .+...+|+|+.++.++..+  ....|..|+.
T Consensus       242 ~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~ni  272 (351)
T 3ruf_A          242 SRDFCYIDNVIQMNILSALAK--DSAKDNIYNV  272 (351)
T ss_dssp             EECCEEHHHHHHHHHHHHTCC--GGGCSEEEEE
T ss_pred             EEeeEEHHHHHHHHHHHHhhc--cccCCCEEEe
Confidence              1234789999999999631  2334555543

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.85  E-value=1.7e-20  Score=168.61  Aligned_cols=218  Identities=13%  Similarity=0.063  Sum_probs=147.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH---HHHHHHHHHHhhCC-------CCceEEEEecCCChHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA---AANEARQLILKEDD-------TARVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~---~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |||||+|+||++++++|+++|++|++++|+..   ..+.+.+.+...++       ..++.++.+|++|.+++.      
T Consensus        73 lVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~------  146 (427)
T 4f6c_A           73 LLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV------  146 (427)
T ss_dssp             EEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC------
T ss_pred             EEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC------
Confidence            69999999999999999999999999999876   33344443332211       357999999999977776      


Q ss_pred             HhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccc-cCCc
Q 023054           71 IALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTY-KGGI  149 (288)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~-~~~~  149 (288)
                        ...++|+||||||....     .++++..+++|+.++.++++++.+   .       ..+||++||... ... ....
T Consensus       147 --~~~~~d~Vih~A~~~~~-----~~~~~~~~~~Nv~g~~~l~~aa~~---~-------~~~~v~~SS~~~-G~~~~~~~  208 (427)
T 4f6c_A          147 --LPENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ---H-------HARLIYVSTISV-GTYFDIDT  208 (427)
T ss_dssp             --CSSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH---T-------TCEEEEEEEGGG-GSEECSSC
T ss_pred             --CcCCCCEEEECCcccCC-----CCCHHHHHHHHHHHHHHHHHHHHh---c-------CCcEEEECchHh-CCCccCCC
Confidence              45689999999997642     356788999999999999999876   2       469999999886 111 0001


Q ss_pred             cccCCCCCC---CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------hHHHHHHHHH
Q 023054          150 RFQKINDRA---GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------AVVMRFLKFF  219 (288)
Q Consensus       150 ~~~~~~~~~---~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~  219 (288)
                      ....+.+..   +..+...|+.+|.+.+.+++.++.    .+  ++++++.||.+.++.....       .....+.+..
T Consensus       209 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~  282 (427)
T 4f6c_A          209 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDL  282 (427)
T ss_dssp             SCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TT--CCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHH
T ss_pred             CCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cC--CCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHH
Confidence            111222222   133678899999999998888653    56  9999999999988765432       1122222222


Q ss_pred             Hh------------hhcCChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          220 SF------------FLWKNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       220 ~~------------~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      ..            ..+...+|+|+.+++++..+.    .|..|.
T Consensus       283 ~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~----~g~~~~  323 (427)
T 4f6c_A          283 LQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT----PQIIYH  323 (427)
T ss_dssp             HHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC----CCSEEE
T ss_pred             HhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC----CCCEEE
Confidence            11            114467899999999996332    455554

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.85  E-value=9.6e-21  Score=165.43  Aligned_cols=222  Identities=13%  Similarity=0.078  Sum_probs=153.6

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++|  ++|++.+|+.....  ...+.......++.++.+|++|.+++.++++..     ++|
T Consensus        28 lVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d  100 (346)
T 4egb_A           28 LVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-----DVQ  100 (346)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----TCC
T ss_pred             EEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-----CCC
Confidence            699999999999999999999  67888877542110  111222222357999999999999999988764     699


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+||.....  ...++++..+++|+.++..+++++...    +     ..+||++||...+....   ....+.+..
T Consensus       101 ~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-----~~~~v~~SS~~vy~~~~---~~~~~~E~~  166 (346)
T 4egb_A          101 VIVNFAAESHVD--RSIENPIPFYDTNVIGTVTLLELVKKY----P-----HIKLVQVSTDEVYGSLG---KTGRFTEET  166 (346)
T ss_dssp             EEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS----T-----TSEEEEEEEGGGGCCCC---SSCCBCTTS
T ss_pred             EEEECCcccchh--hhhhCHHHHHHHHHHHHHHHHHHHHhc----C-----CCEEEEeCchHHhCCCC---cCCCcCCCC
Confidence            999999986432  244667889999999999999888543    1     35899999986553221   122344555


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhh-------------hcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFF-------------LWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-------------~~~  225 (288)
                      ...+...|+.+|.+.+.+++.++.+.   +  ++++.+.||.+.++..........+.......             .+.
T Consensus       167 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  241 (346)
T 4egb_A          167 PLAPNSPYSSSKASADMIALAYYKTY---Q--LPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWL  241 (346)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeE
Confidence            56677889999999999999988775   4  88999999999887654332333333332211             112


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      .++|+|+.+++++..+.    .|..|+
T Consensus       242 ~v~Dva~a~~~~~~~~~----~g~~~~  264 (346)
T 4egb_A          242 HVTDHCSAIDVVLHKGR----VGEVYN  264 (346)
T ss_dssp             EHHHHHHHHHHHHHHCC----TTCEEE
T ss_pred             EHHHHHHHHHHHHhcCC----CCCEEE
Confidence            47899999999996332    565554

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.85  E-value=4.3e-21  Score=166.72  Aligned_cols=208  Identities=14%  Similarity=0.105  Sum_probs=142.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+.....+...    .  -.++.++.+|++|.+++.++++++     ++|+|
T Consensus        24 lVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~--l~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~v   92 (330)
T 2pzm_A           24 LITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP----P--VAGLSVIEGSVTDAGLLERAFDSF-----KPTHV   92 (330)
T ss_dssp             EEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC----S--CTTEEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh----c--cCCceEEEeeCCCHHHHHHHHhhc-----CCCEE
Confidence            699999999999999999999999999997543221111    1  136889999999999999888765     79999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||.....   +.++++  +++|+.++..+++++...    +     .++||++||...+..... . ..++++..  
T Consensus        93 ih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~----~-----~~~iV~~SS~~~~~~~~~-~-~~~~~E~~--  154 (330)
T 2pzm_A           93 VHSAAAYKDP---DDWAED--AATNVQGSINVAKAASKA----G-----VKRLLNFQTALCYGRPAT-V-PIPIDSPT--  154 (330)
T ss_dssp             EECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHH----T-----CSEEEEEEEGGGGCSCSS-S-SBCTTCCC--
T ss_pred             EECCccCCCc---cccChh--HHHHHHHHHHHHHHHHHc----C-----CCEEEEecCHHHhCCCcc-C-CCCcCCCC--
Confidence            9999976432   334455  999999999999998732    2     469999999876432110 0 00122222  


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceE-EEEeeCCcccCCCCCCChHHHHHHHHHH----------hhhcCChHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNIT-ANSVHPGLIMTNLFKHSAVVMRFLKFFS----------FFLWKNVPQ  229 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~-v~~v~PG~v~t~~~~~~~~~~~~~~~~~----------~~~~~~~~~  229 (288)
                      .+...|+.+|++++.+++.+  .+....  || ++.+.||. .+++.      ..+.....          ...+..++|
T Consensus       155 ~~~~~Y~~sK~~~e~~~~~~--~~~~~~--iR~~~v~gp~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~D  223 (330)
T 2pzm_A          155 APFTSYGISKTAGEAFLMMS--DVPVVS--LRLANVTGPRL-AIGPI------PTFYKRLKAGQKCFCSDTVRDFLDMSD  223 (330)
T ss_dssp             CCCSHHHHHHHHHHHHHHTC--SSCEEE--EEECEEECTTC-CSSHH------HHHHHHHHTTCCCCEESCEECEEEHHH
T ss_pred             CCCChHHHHHHHHHHHHHHc--CCCEEE--EeeeeeECcCC-CCCHH------HHHHHHHHcCCEEeCCCCEecceeHHH
Confidence            35678999999999988876  333333  66 56666764 23221      11111111          123458899


Q ss_pred             HHH-HHHHHhcCCCccCCCceeecc
Q 023054          230 GAA-TTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       230 ~a~-~~~~l~~~~~~~~~tG~~~~~  253 (288)
                      +|+ .+++++..+  .   |..|..
T Consensus       224 va~~a~~~~~~~~--~---g~~~~v  243 (330)
T 2pzm_A          224 FLAIADLSLQEGR--P---TGVFNV  243 (330)
T ss_dssp             HHHHHHHHTSTTC--C---CEEEEE
T ss_pred             HHHHHHHHHhhcC--C---CCEEEe
Confidence            999 999999632  2   555553

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.85  E-value=9.5e-21  Score=165.19  Aligned_cols=213  Identities=17%  Similarity=0.100  Sum_probs=149.6

Q ss_pred             CcccCCChhHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRK-------AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |||||+|+||++++++|+++|       ++|++++|+......      .  ...++.++.+|++|.+++.++++     
T Consensus        18 lVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~--~~~~~~~~~~Dl~d~~~~~~~~~-----   84 (342)
T 2hrz_A           18 AIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G--FSGAVDARAADLSAPGEAEKLVE-----   84 (342)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T--CCSEEEEEECCTTSTTHHHHHHH-----
T ss_pred             EEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c--cCCceeEEEcCCCCHHHHHHHHh-----
Confidence            699999999999999999999       899999997643211      1  14578899999999999888775     


Q ss_pred             CCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           74 NLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                       +++|+||||||....   .+.+++++.+++|+.++..+++++.+...+...    .++||++||...+....    ..+
T Consensus        85 -~~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~----~~~iv~~SS~~~~~~~~----~~~  152 (342)
T 2hrz_A           85 -ARPDVIFHLAAIVSG---EAELDFDKGYRINLDGTRYLFDAIRIANGKDGY----KPRVVFTSSIAVFGAPL----PYP  152 (342)
T ss_dssp             -TCCSEEEECCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCC----CCEEEEEEEGGGCCSSC----CSS
T ss_pred             -cCCCEEEECCccCcc---cccccHHHHHHHHHHHHHHHHHHHHhcccccCC----CcEEEEeCchHhhCCCC----CCC
Confidence             379999999997532   234578899999999999999998875432100    26999999986543211    123


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEee--CCcccCCCCCCChHHHHHHHHHHh----------
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVH--PGLIMTNLFKHSAVVMRFLKFFSF----------  221 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~--PG~v~t~~~~~~~~~~~~~~~~~~----------  221 (288)
                      +++.....+...|+.+|++.+.+++.++.+.......+|++.|.  ||...++...   ....+......          
T Consensus       153 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  229 (342)
T 2hrz_A          153 IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASG---FFSNILREPLVGQEAVLPVPE  229 (342)
T ss_dssp             BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGG---HHHHHHHHHHTTCCEEECSCT
T ss_pred             cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHH---HHHHHHHHHhcCCCeeccCCC
Confidence            34444445677899999999999998887653222227777777  8876554321   12222221111          


Q ss_pred             ---hhcCChHHHHHHHHHHhcCC
Q 023054          222 ---FLWKNVPQGAATTCYVALHP  241 (288)
Q Consensus       222 ---~~~~~~~~~a~~~~~l~~~~  241 (288)
                         ..+..++|+|+.+++++..+
T Consensus       230 ~~~~~~~~v~Dva~~~~~~~~~~  252 (342)
T 2hrz_A          230 SIRHWHASPRSAVGFLIHGAMID  252 (342)
T ss_dssp             TCEEEEECHHHHHHHHHHHHHSC
T ss_pred             ccceeeEehHHHHHHHHHHHhcc
Confidence               11347899999999999643

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.85  E-value=4.4e-20  Score=159.07  Aligned_cols=201  Identities=16%  Similarity=0.145  Sum_probs=145.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|..|++..++....+.       .  ...+.++.+|+++ +++.++++       ++|+|
T Consensus         5 lVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~--~~~~~~~~~Dl~~-~~~~~~~~-------~~d~v   67 (313)
T 3ehe_A            5 VVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------V--NEAARLVKADLAA-DDIKDYLK-------GAEEV   67 (313)
T ss_dssp             EEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------S--CTTEEEECCCTTT-SCCHHHHT-------TCSEE
T ss_pred             EEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------c--CCCcEEEECcCCh-HHHHHHhc-------CCCEE
Confidence            699999999999999999999655555444332111       0  3468899999999 77777664       78999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+....  ..+.++++..+++|+.++..+++++..    .+     .++||++||...+..    ....++++....
T Consensus        68 ih~a~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-----~~~iv~~SS~~vyg~----~~~~~~~E~~~~  132 (313)
T 3ehe_A           68 WHIAANPDV--RIGAENPDEIYRNNVLATYRLLEAMRK----AG-----VSRIVFTSTSTVYGE----AKVIPTPEDYPT  132 (313)
T ss_dssp             EECCCCCCC--C-CCCCHHHHHHHHHHHHHHHHHHHHH----HT-----CCEEEEECCGGGGCS----CSSSSBCTTSCC
T ss_pred             EECCCCCCh--hhhhhCHHHHHHHHHHHHHHHHHHHHH----cC-----CCeEEEeCchHHhCc----CCCCCCCCCCCC
Confidence            999996432  346678899999999999999988543    22     469999999776532    112234444456


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh--------------hhcCC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF--------------FLWKN  226 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--------------~~~~~  226 (288)
                      .+...|+.+|.+.+.+++.++.++   +  ++++++.|+.+.++..... ....+......              ..+..
T Consensus       133 ~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  206 (313)
T 3ehe_A          133 HPISLYGASKLACEALIESYCHTF---D--MQAWIYRFANVIGRRSTHG-VIYDFIMKLKRNPEELEILGNGEQNKSYIY  206 (313)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEECSCEESTTCCCS-HHHHHHHHHHHCTTEEEESTTSCCEECCEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhc---C--CCEEEEeeccccCcCCCcC-hHHHHHHHHHcCCCceEEeCCCCeEEeEEE
Confidence            677889999999999999999886   5  8999999999988764432 22222222111              11235


Q ss_pred             hHHHHHHHHHHhc
Q 023054          227 VPQGAATTCYVAL  239 (288)
Q Consensus       227 ~~~~a~~~~~l~~  239 (288)
                      .+|+|+++++++.
T Consensus       207 v~Dva~a~~~~~~  219 (313)
T 3ehe_A          207 ISDCVDAMLFGLR  219 (313)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhc
Confidence            6799999999995

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.85  E-value=2e-21  Score=161.01  Aligned_cols=198  Identities=13%  Similarity=0.042  Sum_probs=126.8

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||+++++.|+++| ++|++++|+++.+++.        ...++.++.+|++|.+++.++++       ++|+
T Consensus        27 lVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   91 (236)
T 3qvo_A           27 LILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ-------GQDI   91 (236)
T ss_dssp             EEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             EEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc-------CCCE
Confidence            699999999999999999999 8999999998654321        13468999999999999888775       6899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ||||+|...                    ....++.+++.|.+.+     .++||++||.......+...  ........
T Consensus        92 vv~~a~~~~--------------------~~~~~~~~~~~~~~~~-----~~~iV~iSS~~~~~~~~~~~--~~~~~~~~  144 (236)
T 3qvo_A           92 VYANLTGED--------------------LDIQANSVIAAMKACD-----VKRLIFVLSLGIYDEVPGKF--VEWNNAVI  144 (236)
T ss_dssp             EEEECCSTT--------------------HHHHHHHHHHHHHHTT-----CCEEEEECCCCC------------------
T ss_pred             EEEcCCCCc--------------------hhHHHHHHHHHHHHcC-----CCEEEEEecceecCCCCccc--ccchhhcc
Confidence            999998520                    1134667888887764     57999999987654321110  00011111


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhc
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  239 (288)
                      ..+...|..+|.           .+...+  |++++|.||++.++..........  .......+.+++|+|+.++++++
T Consensus       145 ~~~~~~~~~~~~-----------~l~~~g--i~~~~vrPg~i~~~~~~~~~~~~~--~~~~~~~~i~~~DvA~~i~~ll~  209 (236)
T 3qvo_A          145 GEPLKPFRRAAD-----------AIEASG--LEYTILRPAWLTDEDIIDYELTSR--NEPFKGTIVSRKSVAALITDIID  209 (236)
T ss_dssp             CGGGHHHHHHHH-----------HHHTSC--SEEEEEEECEEECCSCCCCEEECT--TSCCSCSEEEHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHH-----------HHHHCC--CCEEEEeCCcccCCCCcceEEecc--CCCCCCcEECHHHHHHHHHHHHc
Confidence            112233433332           223556  999999999998876543211000  00011234689999999999997


Q ss_pred             CCCccCCCceeeccCcc
Q 023054          240 HPNLKGVTGKYFLDCNE  256 (288)
Q Consensus       240 ~~~~~~~tG~~~~~~~~  256 (288)
                       +...++.+.+...++.
T Consensus       210 -~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          210 -KPEKHIGENIGINQPG  225 (236)
T ss_dssp             -STTTTTTEEEEEECSS
T ss_pred             -CcccccCeeEEecCCC
Confidence             4555664444334433

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.85  E-value=4.6e-21  Score=201.25  Aligned_cols=170  Identities=17%  Similarity=0.157  Sum_probs=130.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCChHH---HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNMAA---ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||++|||+++|+.|+++|++ |++++|+...   ..+..+++...  +.++.++.||++|.++++++++++.+ +++
T Consensus      1888 lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~~-~g~ 1964 (2512)
T 2vz8_A         1888 VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEATQ-LGP 1964 (2512)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHHH-HSC
T ss_pred             EEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHHh-cCC
Confidence            69999999999999999999996 8889997543   33444555443  56899999999999999999999875 689


Q ss_pred             cceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           77 LNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        77 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      ||+||||||+...  ..+.+.++|++.+++|+.|++++.+.+.+.|.+       .++||++||.++..+          
T Consensus      1965 id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-------~g~iV~iSS~ag~~g---------- 2027 (2512)
T 2vz8_A         1965 VGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE-------LDYFVIFSSVSCGRG---------- 2027 (2512)
T ss_dssp             EEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT-------CCEEEEECCHHHHTT----------
T ss_pred             CcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-------CCEEEEecchhhcCC----------
Confidence            9999999998654  347788999999999999999999999998855       379999999998873          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcc
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLI  201 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v  201 (288)
                           .++..+|+++|+++.+|++.++.+    |  +...++..|.+
T Consensus      2028 -----~~g~~~Y~aaKaal~~l~~~rr~~----G--l~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2028 -----NAGQANYGFANSAMERICEKRRHD----G--LPGLAVQWGAI 2063 (2512)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHT----T--SCCCEEEECCB
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHC----C--CcEEEEEccCc
Confidence                 677789999999999999976544    4  55555666554

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.84  E-value=3.3e-20  Score=165.02  Aligned_cols=185  Identities=17%  Similarity=0.141  Sum_probs=135.0

Q ss_pred             CcccCCChhHHHHHHHHH-HCCCEEEEEeCChHH---------HHHHHHHHHhhCC---CCc---eEEEEecCCChHHHH
Q 023054            1 MLAGGASGIGLETARVLA-LRKAHVIIAARNMAA---------ANEARQLILKEDD---TAR---VDTLKLDLSSIASIK   64 (288)
Q Consensus         1 lItGas~gIG~~ia~~La-~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~---~~~---~~~~~~Dl~~~~~~~   64 (288)
                      |||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+.....   ..+   +.++.+|++|.+++.
T Consensus         6 lVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   85 (397)
T 1gy8_A            6 LVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLN   85 (397)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHH
Confidence            699999999999999999 999999999987543         2333322322211   124   889999999999988


Q ss_pred             HHHHHHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccccc
Q 023054           65 DFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYT  144 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~  144 (288)
                      +++++    ++++|+||||||.....  .+.++++..+++|+.++..+++++..    .+     .++||++||...+..
T Consensus        86 ~~~~~----~~~~d~vih~A~~~~~~--~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-----~~~iv~~SS~~v~g~  150 (397)
T 1gy8_A           86 GVFTR----HGPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLL----HK-----CDKIIFSSSAAIFGN  150 (397)
T ss_dssp             HHHHH----SCCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-----CCEEEEEEEGGGTBS
T ss_pred             HHHHh----cCCCCEEEECCCccCcC--cchhhHHHHHHHHhHHHHHHHHHHHH----hC-----CCEEEEECCHHHhCC
Confidence            87764    34699999999976421  13356788999999999999998643    22     369999999654321


Q ss_pred             ccCC---ccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          145 YKGG---IRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       145 ~~~~---~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                      ....   ....++++.....+...|+.+|++.+.+++.++.++   +  ++++++.||.+..+.
T Consensus       151 ~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---G--IKGICLRYFNACGAH  209 (397)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECCC
T ss_pred             CCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CcEEEEeccceeCCC
Confidence            1100   001233444444556789999999999999999887   5  999999999997664

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.84  E-value=9.1e-20  Score=161.38  Aligned_cols=219  Identities=11%  Similarity=0.011  Sum_probs=146.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHhhCCCC-ceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-----ANEARQLILKEDDTA-RVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      |||||+|+||+++++.|+++|++|++++|+...     ++.....+...  +. ++.++.+|++|.+++.++++..    
T Consensus        32 lVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----  105 (381)
T 1n7h_A           32 LITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI----  105 (381)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH----
T ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc----
Confidence            699999999999999999999999999997643     22111111111  12 6889999999999999888765    


Q ss_pred             CCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           75 LPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                       ++|+||||||.....  .+.++++..+++|+.++..+++++.+...++..    .++||++||...+.....     ++
T Consensus       106 -~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~----~~~~v~~SS~~vyg~~~~-----~~  173 (381)
T 1n7h_A          106 -KPDEVYNLAAQSHVA--VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR----TVKYYQAGSSEMFGSTPP-----PQ  173 (381)
T ss_dssp             -CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC----CCEEEEEEEGGGGTTSCS-----SB
T ss_pred             -CCCEEEECCcccCcc--ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC----ccEEEEeCcHHHhCCCCC-----CC
Confidence             689999999975421  234567889999999999999999987755321    369999999875432111     33


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCC-ceEEEEeeCCcccCCCCCCChHHHHHHHHHHh------------
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGV-NITANSVHPGLIMTNLFKHSAVVMRFLKFFSF------------  221 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~-~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------------  221 (288)
                      ++.....+...|+.+|++.+.+++.++.+++..-. .+.++.+.||...+...   .....+......            
T Consensus       174 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~---~~~~~~~~~~~~g~~~~~~~g~~~  250 (381)
T 1n7h_A          174 SETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVT---RKITRALGRIKVGLQTKLFLGNLQ  250 (381)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHH---HHHHHHHHHHHHTSCCCEEESCTT
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchh---HHHHHHHHHHHcCCCCeEEeCCCC
Confidence            44444566788999999999999999887653210 01223344543221110   011111111110            


Q ss_pred             --hhcCChHHHHHHHHHHhcC
Q 023054          222 --FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 --~~~~~~~~~a~~~~~l~~~  240 (288)
                        ..+..++|+|+.+++++..
T Consensus       251 ~~~~~v~v~Dva~a~~~~~~~  271 (381)
T 1n7h_A          251 ASRDWGFAGDYVEAMWLMLQQ  271 (381)
T ss_dssp             CEEECEEHHHHHHHHHHHHTS
T ss_pred             ceeeeEEHHHHHHHHHHHHhC
Confidence              1234678999999999964

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.84  E-value=1.2e-20  Score=163.15  Aligned_cols=221  Identities=13%  Similarity=0.070  Sum_probs=141.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhh-CCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKE-DDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++|++|+++.| +.+..+... .+... ....++.++.+|++|.+++.++++       ++|
T Consensus         5 lVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   76 (322)
T 2p4h_X            5 CVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-FLTNLPGASEKLHFFNADLSNPDSFAAAIE-------GCV   76 (322)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-HHHTSTTHHHHEEECCCCTTCGGGGHHHHT-------TCS
T ss_pred             EEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-HHHhhhccCCceEEEecCCCCHHHHHHHHc-------CCC
Confidence            69999999999999999999999999998 653211111 11110 001257888999999998887765       579


Q ss_pred             eEEEccccCCCCCCCCCC-cchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           79 ILINNAGIMFCPYQISED-GIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      +|||+|+...    .+.+ .+++.+++|+.+++++++++.+.+   +     .++||++||..+....+..  ...+++.
T Consensus        77 ~vih~A~~~~----~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~-----~~~iV~~SS~~~~~~~~~~--~~~~~e~  142 (322)
T 2p4h_X           77 GIFHTASPID----FAVSEPEEIVTKRTVDGALGILKACVNSK---T-----VKRFIYTSSGSAVSFNGKD--KDVLDES  142 (322)
T ss_dssp             EEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCS---S-----CCEEEEEEEGGGTSCSSSC--CSEECTT
T ss_pred             EEEEcCCccc----CCCCChHHHHHHHHHHHHHHHHHHHHhcC---C-----ccEEEEeccHHHcccCCCC--CeecCCc
Confidence            9999997431    1222 245699999999999999886541   1     3699999998765432111  0011111


Q ss_pred             CCC---------CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-h-HHHHHHHHHH------
Q 023054          158 AGY---------SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-A-VVMRFLKFFS------  220 (288)
Q Consensus       158 ~~~---------~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~-~~~~~~~~~~------  220 (288)
                      ...         +....|+.||.+.+.+++.++.+   .+  ++++++.||.+.+++.... . ..........      
T Consensus       143 ~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~g--i~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~  217 (322)
T 2p4h_X          143 DWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NG--IDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI  217 (322)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TT--CCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC
T ss_pred             cccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cC--CcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC
Confidence            100         01126999999877766555443   46  9999999999999875432 1 1111111111      


Q ss_pred             -hh--hcCChHHHHHHHHHHhcCCCccCCCceee
Q 023054          221 -FF--LWKNVPQGAATTCYVALHPNLKGVTGKYF  251 (288)
Q Consensus       221 -~~--~~~~~~~~a~~~~~l~~~~~~~~~tG~~~  251 (288)
                       ..  .+..++|+|+.+++++..+   ..+|.|+
T Consensus       218 ~~~~~~~i~v~Dva~a~~~~~~~~---~~~g~~~  248 (322)
T 2p4h_X          218 GVTRFHMVHVDDVARAHIYLLENS---VPGGRYN  248 (322)
T ss_dssp             CEEEEEEEEHHHHHHHHHHHHHSC---CCCEEEE
T ss_pred             cCCCcCEEEHHHHHHHHHHHhhCc---CCCCCEE
Confidence             00  2568999999999999632   2567755

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.84  E-value=2.1e-20  Score=164.42  Aligned_cols=206  Identities=13%  Similarity=0.026  Sum_probs=140.4

Q ss_pred             CcccCCChhHHHHHHHHHH--CCCEEEEEeCChHHHHHHH------HHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh
Q 023054            1 MLAGGASGIGLETARVLAL--RKAHVIIAARNMAAANEAR------QLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA   72 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~--~G~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   72 (288)
                      |||||+|+||+++++.|++  +|++|++++|+........      .... ...+.++.++.+|++|.+++.++      
T Consensus        14 lVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~------   86 (362)
T 3sxp_A           14 LITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFK-NLIGFKGEVIAADINNPLDLRRL------   86 (362)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGG-GGTTCCSEEEECCTTCHHHHHHH------
T ss_pred             EEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhh-hccccCceEEECCCCCHHHHHHh------
Confidence            6999999999999999999  9999999999654111000      0001 11245679999999999988876      


Q ss_pred             cCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           73 LNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      ...++|+||||||....    +.++++..+++|+.++..+++++..    .      +++||++||...+.. ...    
T Consensus        87 ~~~~~D~vih~A~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~----~------~~~~V~~SS~~vyg~-~~~----  147 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSDT----TMLNQELVMKTNYQAFLNLLEIARS----K------KAKVIYASSAGVYGN-TKA----  147 (362)
T ss_dssp             TTSCCSEEEECCCCCGG----GCCCHHHHHHHHTHHHHHHHHHHHH----T------TCEEEEEEEGGGGCS-CCS----
T ss_pred             hccCCCEEEECCccCCc----cccCHHHHHHHHHHHHHHHHHHHHH----c------CCcEEEeCcHHHhCC-CCC----
Confidence            23589999999996532    5577899999999999999998832    2      357999999554322 111    


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHh-------
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSF-------  221 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~-------  221 (288)
                      ++++.....+...|+.+|.+.+.+++.++.+       +.+..|.|+.+..+.....    .....+......       
T Consensus       148 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (362)
T 3sxp_A          148 PNVVGKNESPENVYGFSKLCMDEFVLSHSND-------NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLF  220 (362)
T ss_dssp             SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-------SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECS
T ss_pred             CCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-------CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEE
Confidence            3444455667788999999999988887766       3344455555544432211    122222222211       


Q ss_pred             ------hhcCChHHHHHHHHHHhc
Q 023054          222 ------FLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       222 ------~~~~~~~~~a~~~~~l~~  239 (288)
                            ..+..++|+|+++++++.
T Consensus       221 ~~g~~~~~~i~v~Dva~ai~~~~~  244 (362)
T 3sxp_A          221 EFGEQLRDFVYIEDVIQANVKAMK  244 (362)
T ss_dssp             GGGCCEEECEEHHHHHHHHHHHTT
T ss_pred             CCCCeEEccEEHHHHHHHHHHHHh
Confidence                  112348999999999996

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.84  E-value=2.5e-20  Score=162.86  Aligned_cols=161  Identities=14%  Similarity=0.071  Sum_probs=129.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||+++++.|+++|++|++++|+...              .++.++.+|++|.+++.++++       ++|+|
T Consensus        23 lVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   81 (347)
T 4id9_A           23 LVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIM-------GVSAV   81 (347)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHh-------CCCEE
Confidence            699999999999999999999999999998643              357889999999998887765       78999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+....    +...++..+++|+.++..+++++..    .+     .++||++||...+....  ....++.+....
T Consensus        82 ih~A~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~----~~-----~~~~V~~SS~~vyg~~~--~~~~~~~E~~~~  146 (347)
T 4id9_A           82 LHLGAFMSW----APADRDRMFAVNVEGTRRLLDAASA----AG-----VRRFVFASSGEVYPENR--PEFLPVTEDHPL  146 (347)
T ss_dssp             EECCCCCCS----SGGGHHHHHHHHTHHHHHHHHHHHH----TT-----CSEEEEEEEGGGTTTTS--CSSSSBCTTSCC
T ss_pred             EECCcccCc----chhhHHHHHHHHHHHHHHHHHHHHH----cC-----CCeEEEECCHHHhCCCC--CCCCCcCCCCCC
Confidence            999997643    3345588999999999999998754    21     35999999976543210  122345555566


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCccc
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM  202 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~  202 (288)
                      .+...|+.+|.+.+.+++.++.+.   +  ++++.+.|+.+.
T Consensus       147 ~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~  183 (347)
T 4id9_A          147 CPNSPYGLTKLLGEELVRFHQRSG---A--METVILRFSHTQ  183 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHS---S--SEEEEEEECEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHhc---C--CceEEEccceEe
Confidence            778899999999999999988874   5  899999999987

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=3.6e-19  Score=156.87  Aligned_cols=218  Identities=11%  Similarity=0.032  Sum_probs=143.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhhC--CCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAAN-EARQLILKED--DTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~-~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||+|+||++++++|+++|++|++++|+..... +....+....  .+.++.++.+|++|.+++.++++..     ++
T Consensus         5 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   79 (372)
T 1db3_A            5 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-----QP   79 (372)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-----CC
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-----CC
Confidence            69999999999999999999999999999865421 1112221110  1346889999999999999988765     68


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |+||||||....  ..+.++++..+++|+.++..+++++.+...+.      .++||++||...+....    ..++++.
T Consensus        80 d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~iv~~SS~~v~g~~~----~~~~~E~  147 (372)
T 1db3_A           80 DEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLEAIRFLGLEK------KTRFYQASTSELYGLVQ----EIPQKET  147 (372)
T ss_dssp             SEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT------TCEEEEEEEGGGGTTCC----SSSBCTT
T ss_pred             CEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHHHHHHhCCCC------CcEEEEeCChhhhCCCC----CCCCCcc
Confidence            999999997543  23456788899999999999999997654221      36999999976543211    1233444


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC-C--hHHHHHHHHHHh-------------
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH-S--AVVMRFLKFFSF-------------  221 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~-~--~~~~~~~~~~~~-------------  221 (288)
                      ....+...|+.+|++.+.+++.++.+++     +.+..+.|..+..+.... .  .....+......             
T Consensus       148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  222 (372)
T 1db3_A          148 TPFYPRSPYAVAKLYAYWITVNYRESYG-----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDS  222 (372)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCc
Confidence            4455678899999999999999998765     334444444443332111 1  111112211111             


Q ss_pred             -hhcCChHHHHHHHHHHhcC
Q 023054          222 -FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 -~~~~~~~~~a~~~~~l~~~  240 (288)
                       ..+...+|+|+.++.++..
T Consensus       223 ~~~~i~v~Dva~a~~~~~~~  242 (372)
T 1db3_A          223 LRDWGHAKDYVKMQWMMLQQ  242 (372)
T ss_dssp             EECCEEHHHHHHHHHHTTSS
T ss_pred             eeeeeEHHHHHHHHHHHHhc
Confidence             1123578999999998853

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.83  E-value=4e-21  Score=157.98  Aligned_cols=209  Identities=12%  Similarity=0.006  Sum_probs=145.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+++..+..         ..++.++.+|++|.+++.++++       ++|+|
T Consensus         8 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   71 (227)
T 3dhn_A            8 VLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK-------GADAV   71 (227)
T ss_dssp             EEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc-------CCCEE
Confidence            6999999999999999999999999999997653221         2568999999999999888775       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||....        ....+++|+.++..+++++...    +     ..+||++||.......+...     ......
T Consensus        72 i~~a~~~~~--------~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~Ss~~~~~~~~~~~-----~~~~~~  129 (227)
T 3dhn_A           72 ISAFNPGWN--------NPDIYDETIKVYLTIIDGVKKA----G-----VNRFLMVGGAGSLFIAPGLR-----LMDSGE  129 (227)
T ss_dssp             EECCCC--------------CCSHHHHHHHHHHHHHHHT----T-----CSEEEEECCSTTSEEETTEE-----GGGTTC
T ss_pred             EEeCcCCCC--------ChhHHHHHHHHHHHHHHHHHHh----C-----CCEEEEeCChhhccCCCCCc-----cccCCc
Confidence            999986421        1227888999998888887542    2     35999999987665432211     112233


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHH---HHHhhhcCChHHHHHHHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK---FFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~l  237 (288)
                      .+...|+.+|.+.+.+.+.++++   .+  ++++.+.||.+.++.............   .-....+..++|+|+.++++
T Consensus       130 ~p~~~Y~~sK~~~e~~~~~~~~~---~~--~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~  204 (227)
T 3dhn_A          130 VPENILPGVKALGEFYLNFLMKE---KE--IDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDE  204 (227)
T ss_dssp             SCGGGHHHHHHHHHHHHHTGGGC---CS--SEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhc---cC--ccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHH
Confidence            45678999999999877777653   35  999999999997664322100000000   00012245799999999999


Q ss_pred             hcCCCccCCCceeeccCc
Q 023054          238 ALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~~~~  255 (288)
                      +.++.   ..|+.+..++
T Consensus       205 l~~~~---~~g~~~~~~~  219 (227)
T 3dhn_A          205 LEHPK---HHQERFTIGY  219 (227)
T ss_dssp             HHSCC---CCSEEEEEEC
T ss_pred             HhCcc---ccCcEEEEEe
Confidence            97433   3466555433

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.83  E-value=2.7e-19  Score=155.45  Aligned_cols=214  Identities=12%  Similarity=0.005  Sum_probs=148.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAAN-EARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||+++++.|+++|++|++++|+..... .....+.   ...++.++.+|++|.+++.++++..     ++|+
T Consensus        18 lVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   89 (335)
T 1rpn_A           18 LVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---IEGDIQYEDGDMADACSVQRAVIKA-----QPQE   89 (335)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---CGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc---ccCceEEEECCCCCHHHHHHHHHHc-----CCCE
Confidence            69999999999999999999999999999764311 1111111   1346889999999999999888765     6899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||+||....  ..+.++++..+++|+.++..+++++.+.-.        .++||++||...+....    ..++++...
T Consensus        90 Vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--------~~~~v~~SS~~v~g~~~----~~~~~E~~~  155 (335)
T 1rpn_A           90 VYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLEAIRQFSP--------ETRFYQASTSEMFGLIQ----AERQDENTP  155 (335)
T ss_dssp             EEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHHCT--------TSEEEEEEEGGGGCSCS----SSSBCTTSC
T ss_pred             EEECccccch--hhhhhChHHHHHHHHHHHHHHHHHHHHhCC--------CCeEEEEeCHHHhCCCC----CCCCCcccC
Confidence            9999997532  122456788999999999999998865310        15999999976543211    123334444


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhh--------------
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFF--------------  222 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~--------------  222 (288)
                      ..+...|+.+|++.+.+++.++.+++     +.+..+.|+.+..+......   ....+.......              
T Consensus       156 ~~p~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~  230 (335)
T 1rpn_A          156 FYPRSPYGVAKLYGHWITVNYRESFG-----LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKR  230 (335)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEE
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHcC-----CcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCccee
Confidence            45667899999999999999887763     66677888877665432211   111222111111              


Q ss_pred             hcCChHHHHHHHHHHhcCC
Q 023054          223 LWKNVPQGAATTCYVALHP  241 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~  241 (288)
                      .+...+|+|+.++.++..+
T Consensus       231 ~~i~v~Dva~a~~~~~~~~  249 (335)
T 1rpn_A          231 DWGFAGDYVEAMWLMLQQD  249 (335)
T ss_dssp             ECEEHHHHHHHHHHHHHSS
T ss_pred             ceEEHHHHHHHHHHHHhcC
Confidence            1224589999999999643

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.83  E-value=2.1e-20  Score=162.81  Aligned_cols=223  Identities=14%  Similarity=0.093  Sum_probs=142.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH--HHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA--RQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++|++|+++.|+.+..+..  ...+. .  ..++.++.+|++|.+++.++++       ++|
T Consensus        13 lVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~-------~~D   82 (338)
T 2rh8_A           13 CVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA-------GCD   82 (338)
T ss_dssp             EEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT-------TCS
T ss_pred             EEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc-------CCC
Confidence            6999999999999999999999999998876532211  11222 1  2468899999999888777664       589


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+|+.....   ..+..++.+++|+.++.++++++.+..   .     -++||++||..+....+.......+++..
T Consensus        83 ~Vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-----v~r~V~~SS~~~~~~~~~~~~~~~~~E~~  151 (338)
T 2rh8_A           83 FVFHVATPVHFA---SEDPENDMIKPAIQGVVNVMKACTRAK---S-----VKRVILTSSAAAVTINQLDGTGLVVDEKN  151 (338)
T ss_dssp             EEEEESSCCCC------------CHHHHHHHHHHHHHHHHCT---T-----CCEEEEECCHHHHHHHHHTCSCCCCCTTT
T ss_pred             EEEEeCCccCCC---CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-----cCEEEEEecHHHeecCCcCCCCcccChhh
Confidence            999999865211   112234589999999999999887542   1     25999999987544211100000111111


Q ss_pred             --------CC-CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-h-HHHHHH-------HHHH
Q 023054          159 --------GY-SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-A-VVMRFL-------KFFS  220 (288)
Q Consensus       159 --------~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~-~~~~~~-------~~~~  220 (288)
                              .. +....|+.||.+.+.+++.++++   .+  +++++|.||.+.++..... . ......       ..+.
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g--i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~  226 (338)
T 2rh8_A          152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NN--IDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLIN  226 (338)
T ss_dssp             TTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HT--CCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHH
T ss_pred             ccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cC--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccc
Confidence                    00 01126999999988887776654   35  8999999999999875432 1 111110       0011


Q ss_pred             ---hh-------hcCChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          221 ---FF-------LWKNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       221 ---~~-------~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                         ..       .+..++|+|+++++++..+   ...|.|+.
T Consensus       227 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~~~~~~~  265 (338)
T 2rh8_A          227 GMKGMQMLSGSVSIAHVEDVCRAHIFVAEKE---SASGRYIC  265 (338)
T ss_dssp             HHHHHHHHHSSEEEEEHHHHHHHHHHHHHCT---TCCEEEEE
T ss_pred             cccccccccCcccEEEHHHHHHHHHHHHcCC---CcCCcEEE
Confidence               00       3678999999999999632   23566654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=1.6e-19  Score=159.42  Aligned_cols=217  Identities=11%  Similarity=-0.003  Sum_probs=147.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-----ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||+|+||+++++.|+++|++|++++|+...     ++.+...+... ...++.++.+|++|.+++.++++..     
T Consensus        28 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----  101 (375)
T 1t2a_A           28 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV-----  101 (375)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc-----
Confidence            699999999999999999999999999997542     11111111000 1346889999999999999888765     


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ++|+||||||.....  .+.++++..+++|+.++..+++++.+...+.      .++||++||...+....    ..+++
T Consensus       102 ~~d~vih~A~~~~~~--~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~------~~~iv~~SS~~~~~~~~----~~~~~  169 (375)
T 1t2a_A          102 KPTEIYNLGAQSHVK--ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN------SVKFYQASTSELYGKVQ----EIPQK  169 (375)
T ss_dssp             CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT------TCEEEEEEEGGGTCSCS----SSSBC
T ss_pred             CCCEEEECCCccccc--ccccCHHHHHHHHHHHHHHHHHHHHHhCCCc------cceEEEecchhhhCCCC----CCCCC
Confidence            689999999975321  1235678899999999999999987654211      26999999987653211    12334


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC-C--hHHHHHHHHHHh-----------
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH-S--AVVMRFLKFFSF-----------  221 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~-~--~~~~~~~~~~~~-----------  221 (288)
                      +.....+...|+.+|++.+.+++.++.+++     +.+..+.|+.+..+.... .  .....+......           
T Consensus       170 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  244 (375)
T 1t2a_A          170 ETTPFYPRSPYGAAKLYAYWIVVNFREAYN-----LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNL  244 (375)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCT
T ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCC
Confidence            444455667899999999999999988764     666667776665543221 1  011111111111           


Q ss_pred             ---hhcCChHHHHHHHHHHhcC
Q 023054          222 ---FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 ---~~~~~~~~~a~~~~~l~~~  240 (288)
                         ..+...+|+|+.++.++..
T Consensus       245 ~~~~~~i~v~Dva~a~~~~~~~  266 (375)
T 1t2a_A          245 DAKRDWGHAKDYVEAMWLMLQN  266 (375)
T ss_dssp             TCEECCEEHHHHHHHHHHHHHS
T ss_pred             CceeeeEEHHHHHHHHHHHHhc
Confidence               1123578999999999964

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.83  E-value=2.5e-20  Score=150.60  Aligned_cols=193  Identities=11%  Similarity=-0.028  Sum_probs=135.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||+|+||++++++|+++|++|++++|+++..+..        ...++.++.+|++|.+++.++++       ++|+|
T Consensus         7 lVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------~~d~v   71 (206)
T 1hdo_A            7 AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------GQDAV   71 (206)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------TCSEE
T ss_pred             EEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            6899999999999999999999999999997653211        03468899999999988887764       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||....      .++   .++|+.++..+++++...    +     .++||++||.......+.           ..
T Consensus        72 i~~a~~~~~------~~~---~~~n~~~~~~~~~~~~~~----~-----~~~~v~~Ss~~~~~~~~~-----------~~  122 (206)
T 1hdo_A           72 IVLLGTRND------LSP---TTVMSEGARNIVAAMKAH----G-----VDKVVACTSAFLLWDPTK-----------VP  122 (206)
T ss_dssp             EECCCCTTC------CSC---CCHHHHHHHHHHHHHHHH----T-----CCEEEEECCGGGTSCTTC-----------SC
T ss_pred             EECccCCCC------CCc---cchHHHHHHHHHHHHHHh----C-----CCeEEEEeeeeeccCccc-----------cc
Confidence            999997543      111   247888888877776542    2     469999999865432100           00


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcc-cCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHhc
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLI-MTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  239 (288)
                      .+...|+.+|.+++.+.+.       .+  ++++++.||.+ .++........  . ...+...+.+++|+|+.+++++.
T Consensus       123 ~~~~~y~~~K~~~e~~~~~-------~~--i~~~~lrp~~~~~~~~~~~~~~~--~-~~~~~~~~i~~~Dva~~~~~~~~  190 (206)
T 1hdo_A          123 PRLQAVTDDHIRMHKVLRE-------SG--LKYVAVMPPHIGDQPLTGAYTVT--L-DGRGPSRVISKHDLGHFMLRCLT  190 (206)
T ss_dssp             GGGHHHHHHHHHHHHHHHH-------TC--SEEEEECCSEEECCCCCSCCEEE--S-SSCSSCSEEEHHHHHHHHHHTTS
T ss_pred             ccchhHHHHHHHHHHHHHh-------CC--CCEEEEeCCcccCCCCCcceEec--c-cCCCCCCccCHHHHHHHHHHHhc
Confidence            1567899999999887742       45  99999999998 44433221000  0 00010245689999999999996


Q ss_pred             CCCccCCCceeec
Q 023054          240 HPNLKGVTGKYFL  252 (288)
Q Consensus       240 ~~~~~~~tG~~~~  252 (288)
                      ++   ..+|+.|.
T Consensus       191 ~~---~~~g~~~~  200 (206)
T 1hdo_A          191 TD---EYDGHSTY  200 (206)
T ss_dssp             CS---TTTTCEEE
T ss_pred             Cc---ccccccee
Confidence            32   25677665

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.82  E-value=2e-19  Score=155.98  Aligned_cols=172  Identities=15%  Similarity=0.118  Sum_probs=131.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+.....   +    .. ..++.++.+|++|.+++.+++++     .++|+|
T Consensus         5 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~----~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   71 (330)
T 2c20_A            5 LICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---D----AI-TEGAKFYNGDLRDKAFLRDVFTQ-----ENIEAV   71 (330)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---G----GS-CTTSEEEECCTTCHHHHHHHHHH-----SCEEEE
T ss_pred             EEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---h----hc-CCCcEEEECCCCCHHHHHHHHhh-----cCCCEE
Confidence            69999999999999999999999999998754321   1    11 12688999999999998888765     379999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+||.....  .+.++++..+++|+.++..+++++..    .+     .++||++||...+...    ...++++....
T Consensus        72 ih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-----~~~~v~~Ss~~~~~~~----~~~~~~E~~~~  136 (330)
T 2c20_A           72 MHFAADSLVG--VSMEKPLQYYNNNVYGALCLLEVMDE----FK-----VDKFIFSSTAATYGEV----DVDLITEETMT  136 (330)
T ss_dssp             EECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHH----TT-----CCEEEEECCGGGGCSC----SSSSBCTTSCC
T ss_pred             EECCcccCcc--ccccCHHHHHHHHhHHHHHHHHHHHH----cC-----CCEEEEeCCceeeCCC----CCCCCCcCCCC
Confidence            9999975321  13356788999999999999988643    22     3689999997654321    11233444445


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                      .+...|+.+|.+.+.+++.++.++   +  ++++.+.||.+.++.
T Consensus       137 ~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          137 NPTNTYGETKLAIEKMLHWYSQAS---N--LRYKIFRYFNVAGAT  176 (330)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHTS---S--CEEEEEECSEEECCC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---C--CcEEEEecCcccCCC
Confidence            567889999999999999988765   5  999999999997764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.82  E-value=1.9e-19  Score=156.58  Aligned_cols=201  Identities=14%  Similarity=0.045  Sum_probs=135.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+.....+.   +..   -.++.++.+|++|.+++.++++..     ++|+|
T Consensus        25 lVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~v   93 (333)
T 2q1w_A           25 FITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD---HPNLTFVEGSIADHALVNQLIGDL-----QPDAV   93 (333)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC---CTTEEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh---cCCceEEEEeCCCHHHHHHHHhcc-----CCcEE
Confidence            6999999999999999999999999999975321110   100   136889999999999998888752     69999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||.....   +.++++  +++|+.++..+++++.+.    +     .++||++||...+...+..... ++++..  
T Consensus        94 ih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~----~-----~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--  156 (333)
T 2q1w_A           94 VHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKKN----N-----VGRFVYFQTALCYGVKPIQQPV-RLDHPR--  156 (333)
T ss_dssp             EECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHT----T-----CSEEEEEEEGGGGCSCCCSSSB-CTTSCC--
T ss_pred             EECceecCCC---ccCChH--HHHHHHHHHHHHHHHHHh----C-----CCEEEEECcHHHhCCCcccCCC-CcCCCC--
Confidence            9999976432   233444  999999999999998762    1     4699999997654211001111 222222  


Q ss_pred             Ccc-ccchhhHHHHHHHHHH-HHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHH----------hhhcCChH
Q 023054          161 SDK-KAYGQSKLANILHANE-LSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFS----------FFLWKNVP  228 (288)
Q Consensus       161 ~~~-~~Y~~sK~a~~~~~~~-la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~----------~~~~~~~~  228 (288)
                      .+. ..|+.+|++.+.+++. ++          .+..+.|+.+..+... ......+.+...          ...+..++
T Consensus       157 ~p~~~~Y~~sK~~~E~~~~~s~~----------~~~ilR~~~v~gp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  225 (333)
T 2q1w_A          157 NPANSSYAISKSANEDYLEYSGL----------DFVTFRLANVVGPRNV-SGPLPIFFQRLSEGKKCFVTKARRDFVFVK  225 (333)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHTC----------CEEEEEESEEESTTCC-SSHHHHHHHHHHTTCCCEEEECEECEEEHH
T ss_pred             CCCCCchHHHHHHHHHHHHhhhC----------CeEEEeeceEECcCCc-CcHHHHHHHHHHcCCeeeCCCceEeeEEHH
Confidence            344 7899999999998887 65          2344666666554411 112222222211          12235789


Q ss_pred             HHHHHHHHHhcC
Q 023054          229 QGAATTCYVALH  240 (288)
Q Consensus       229 ~~a~~~~~l~~~  240 (288)
                      |+|+.+++++..
T Consensus       226 Dva~ai~~~~~~  237 (333)
T 2q1w_A          226 DLARATVRAVDG  237 (333)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhc
Confidence            999999999963

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.82  E-value=2.2e-19  Score=156.50  Aligned_cols=217  Identities=11%  Similarity=0.013  Sum_probs=148.8

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-HHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-ASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++ |++|++++|+....+...       ...++.++.+|++|. +.+.++++       ++|
T Consensus         4 lVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~-------~~d   69 (345)
T 2bll_A            4 LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------KCD   69 (345)
T ss_dssp             EEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH-------HCS
T ss_pred             EEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc-------CCC
Confidence            69999999999999999998 899999999876543211       134689999999984 55666654       479


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+||...+..  ..++++..+++|+.++..+++++...          +.+||++||...+.....    ..+++..
T Consensus        70 ~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~v~g~~~~----~~~~e~~  133 (345)
T 2bll_A           70 VVLPLVAIATPIE--YTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCSD----KYFDEDH  133 (345)
T ss_dssp             EEEECBCCCCHHH--HHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCCC----SSBCTTT
T ss_pred             EEEEcccccCccc--hhcCHHHHHHHHHHHHHHHHHHHHHh----------CCeEEEEecHHHcCCCCC----CCcCCcc
Confidence            9999999754311  12456789999999999988887542          259999999765432111    1111111


Q ss_pred             C-------CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC--------ChHHHHHHHHHHh--
Q 023054          159 G-------YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH--------SAVVMRFLKFFSF--  221 (288)
Q Consensus       159 ~-------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~~~--  221 (288)
                      .       ..+...|+.+|.+.+.+++.++.+.   +  ++++++.||.+.++....        ......+......  
T Consensus       134 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (345)
T 2bll_A          134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS  208 (345)
T ss_dssp             CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTC
T ss_pred             cccccCcccCcccccHHHHHHHHHHHHHHHHhc---C--CCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCC
Confidence            1       1345589999999999999988765   5  889999999998776432        1122222222111  


Q ss_pred             -----------hhcCChHHHHHHHHHHhcCCCccCCCceeecc
Q 023054          222 -----------FLWKNVPQGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       222 -----------~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                                 ..+..++|+|+.+++++.. .....+|+.|+.
T Consensus       209 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~g~~~~i  250 (345)
T 2bll_A          209 PIKLIDGGKQKRCFTDIRDGIEALYRIIEN-AGNRCDGEIINI  250 (345)
T ss_dssp             CEEEGGGSCCEEECEEHHHHHHHHHHHHHC-GGGTTTTEEEEE
T ss_pred             CcEEECCCCEEEEEEEHHHHHHHHHHHHhh-ccccCCCceEEe
Confidence                       1134678999999999963 322345665553

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.82  E-value=2.9e-20  Score=160.29  Aligned_cols=207  Identities=11%  Similarity=0.003  Sum_probs=117.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+...            ++    ++.+|++|.+++.++++..     ++|+|
T Consensus         6 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~----~~~~Dl~d~~~~~~~~~~~-----~~d~v   64 (315)
T 2ydy_A            6 LVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------PK----FEQVNLLDSNAVHHIIHDF-----QPHVI   64 (315)
T ss_dssp             EEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----CCSEE
T ss_pred             EEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------CC----eEEecCCCHHHHHHHHHhh-----CCCEE
Confidence            699999999999999999999999999987543            11    6789999999988888765     68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||.....  .+.+++++.+++|+.++..+++++.+.          +++||++||...+..     ...++++....
T Consensus        65 ih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~~~-----~~~~~~E~~~~  127 (315)
T 2ydy_A           65 VHCAAERRPD--VVENQPDAASQLNVDASGNLAKEAAAV----------GAFLIYISSDYVFDG-----TNPPYREEDIP  127 (315)
T ss_dssp             EECC---------------------CHHHHHHHHHHHHH----------TCEEEEEEEGGGSCS-----SSCSBCTTSCC
T ss_pred             EECCcccChh--hhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchHHHcCC-----CCCCCCCCCCC
Confidence            9999975432  245678899999999999999998752          359999999876532     11233344445


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccC---CCCCCChHHHHHH-HH--H-----HhhhcCChHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT---NLFKHSAVVMRFL-KF--F-----SFFLWKNVPQ  229 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t---~~~~~~~~~~~~~-~~--~-----~~~~~~~~~~  229 (288)
                      .+...|+.+|.+.+.+++.++.++  ..  +|++.|. |+..+   .+....  ..... ..  +     ....+..++|
T Consensus       128 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~--lR~~~v~-G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~D  200 (315)
T 2ydy_A          128 APLNLYGKTKLDGEKAVLENNLGA--AV--LRIPILY-GEVEKLEESAVTVM--FDKVQFSNKSANMDHWQQRFPTHVKD  200 (315)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCTTC--EE--EEECSEE-CSCSSGGGSTTGGG--HHHHHCCSSCEEEECSSBBCCEEHHH
T ss_pred             CCcCHHHHHHHHHHHHHHHhCCCe--EE--Eeeeeee-CCCCcccccHHHHH--HHHHHhcCCCeeeccCceECcEEHHH
Confidence            567789999999999998875433  12  6666666 55544   222211  11111 00  0     1123347899


Q ss_pred             HHHHHHHHhcCCCccCCCceeec
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      +|+.+++++.++......|..|.
T Consensus       201 va~a~~~~~~~~~~~~~~~~~~~  223 (315)
T 2ydy_A          201 VATVCRQLAEKRMLDPSIKGTFH  223 (315)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEE
T ss_pred             HHHHHHHHHHhhccccCCCCeEE
Confidence            99999999963211223455444

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.82  E-value=5.1e-19  Score=152.32  Aligned_cols=197  Identities=17%  Similarity=0.138  Sum_probs=144.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||+++++.|+++|++|++++|+....+     +      .++.++.+|++ .+++.++++       ++|+|
T Consensus         6 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~------~~~~~~~~Dl~-~~~~~~~~~-------~~d~V   66 (311)
T 3m2p_A            6 AVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----I------NDYEYRVSDYT-LEDLINQLN-------DVDAV   66 (311)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------TCSEE
T ss_pred             EEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----C------CceEEEEcccc-HHHHHHhhc-------CCCEE
Confidence            69999999999999999999999999999843322     1      15889999999 888777664       79999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+.....      +.+..+++|+.++..+++++...    +     -.+||++||...+..    ....++++....
T Consensus        67 ih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~~----~-----~~r~v~~SS~~vyg~----~~~~~~~E~~~~  127 (311)
T 3m2p_A           67 VHLAATRGSQ------GKISEFHDNEILTQNLYDACYEN----N-----ISNIVYASTISAYSD----ETSLPWNEKELP  127 (311)
T ss_dssp             EECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHHT----T-----CCEEEEEEEGGGCCC----GGGCSBCTTSCC
T ss_pred             EEccccCCCC------ChHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEEccHHHhCC----CCCCCCCCCCCC
Confidence            9999976432      56788999999999998887532    1     358999999655422    112234444555


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhh-------------hcCCh
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFF-------------LWKNV  227 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-------------~~~~~  227 (288)
                      .+...|+.+|.+.+.+++.++.+   .+  ++++.+.||.+.++..........+.......             .+...
T Consensus       128 ~p~~~Y~~sK~~~E~~~~~~~~~---~g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v  202 (311)
T 3m2p_A          128 LPDLMYGVSKLACEHIGNIYSRK---KG--LCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYA  202 (311)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHH---SC--CEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHH---cC--CCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEH
Confidence            66788999999999999988875   35  89999999999887655322333333332111             22356


Q ss_pred             HHHHHHHHHHhcC
Q 023054          228 PQGAATTCYVALH  240 (288)
Q Consensus       228 ~~~a~~~~~l~~~  240 (288)
                      +|+|+.+++++..
T Consensus       203 ~Dva~a~~~~~~~  215 (311)
T 3m2p_A          203 KDAAKSVIYALKQ  215 (311)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhc
Confidence            6999999999963

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.82  E-value=1.8e-19  Score=147.28  Aligned_cols=208  Identities=13%  Similarity=0.105  Sum_probs=126.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|++++.+...         .++.++.+|++|.++  +.       ..++|+|
T Consensus         4 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~--~~-------~~~~d~v   65 (221)
T 3ew7_A            4 GIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL--SD-------LSDQNVV   65 (221)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH--HH-------HTTCSEE
T ss_pred             EEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh--hh-------hcCCCEE
Confidence            69999999999999999999999999999987655321         358899999999887  21       2478999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||....           ...+|+.++    +.+++.+.+.+     .+++|++||..+....+...   ...+....
T Consensus        66 i~~ag~~~~-----------~~~~~~~~~----~~l~~a~~~~~-----~~~~v~~SS~~~~~~~~~~~---~~~~~~~~  122 (221)
T 3ew7_A           66 VDAYGISPD-----------EAEKHVTSL----DHLISVLNGTV-----SPRLLVVGGAASLQIDEDGN---TLLESKGL  122 (221)
T ss_dssp             EECCCSSTT-----------TTTSHHHHH----HHHHHHHCSCC-----SSEEEEECCCC--------------------
T ss_pred             EECCcCCcc-----------ccchHHHHH----HHHHHHHHhcC-----CceEEEEecceEEEcCCCCc---cccccCCC
Confidence            999997421           133455544    44555554432     47999999988765432210   11111122


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH--HH-HHHHHHhhhcCChHHHHHHHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV--MR-FLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~--~~-~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                      .+...|+.+|.+.+.+. .+..  ...+  ++++.|.||.+.++........  .. +...-....+.+++|+|+.++.+
T Consensus       123 ~~~~~y~~~k~~~e~~~-~~~~--~~~g--i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  197 (221)
T 3ew7_A          123 REAPYYPTARAQAKQLE-HLKS--HQAE--FSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDE  197 (221)
T ss_dssp             --CCCSCCHHHHHHHHH-HHHT--TTTT--SCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHH-HHHh--hccC--ccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHH
Confidence            34567999999988762 2221  1456  9999999999987621111000  00 00000112356899999999999


Q ss_pred             hcCCCccCCCceeeccCccC
Q 023054          238 ALHPNLKGVTGKYFLDCNEM  257 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~~~~~~  257 (288)
                      +.++.   ..|+.|.-++..
T Consensus       198 l~~~~---~~g~~~~~~~~~  214 (221)
T 3ew7_A          198 IERPN---HLNEHFTVAGKL  214 (221)
T ss_dssp             HHSCS---CTTSEEECCC--
T ss_pred             HhCcc---ccCCEEEECCCC
Confidence            97433   346666655443

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.82  E-value=7.6e-20  Score=159.78  Aligned_cols=179  Identities=15%  Similarity=0.112  Sum_probs=130.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH------HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA------ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      |||||+|+||++++++|+++|++|++++|+...      ..+..+.+.... +.++.++.+|++|.+++.++++..    
T Consensus         6 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~----   80 (348)
T 1ek6_A            6 LVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY----   80 (348)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC----
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc----
Confidence            699999999999999999999999999885322      112222222211 356889999999999988887652    


Q ss_pred             CCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           75 LPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                       ++|+||||||.....  .+.+++++.+++|+.++..+++++..    .+     .++||++||...+...    ...++
T Consensus        81 -~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-----~~~iv~~SS~~~~g~~----~~~~~  144 (348)
T 1ek6_A           81 -SFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMKA----HG-----VKNLVFSSSATVYGNP----QYLPL  144 (348)
T ss_dssp             -CEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-----CCEEEEEEEGGGGCSC----SSSSB
T ss_pred             -CCCEEEECCCCcCcc--chhhchHHHHHHHHHHHHHHHHHHHH----hC-----CCEEEEECcHHHhCCC----CCCCc
Confidence             799999999975321  12356788999999999999887542    22     3699999997654321    11223


Q ss_pred             CCCCCCCc-cccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC
Q 023054          155 NDRAGYSD-KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN  204 (288)
Q Consensus       155 ~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~  204 (288)
                      ++.....+ ...|+.+|++.+.+++.++.+ + .+  +++..+.|+.+-.+
T Consensus       145 ~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~-~~--~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D-KT--WNAVLLRYFNPTGA  191 (348)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C-TT--CEEEEEEECEEECC
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHhc-C-CC--cceEEEeeccccCC
Confidence            33333333 678999999999999999887 3 34  88999999888665

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.82  E-value=2.3e-19  Score=158.83  Aligned_cols=210  Identities=13%  Similarity=0.038  Sum_probs=148.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+.......      .  ..++.++.+|++|.+++.++++       ++|+|
T Consensus        33 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~V   97 (379)
T 2c5a_A           33 SITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVMENCLKVTE-------GVDHV   97 (379)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             EEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCHHHHHHHhC-------CCCEE
Confidence            6999999999999999999999999999986432210      1  2357899999999998887764       68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc-cccCCCCCC-
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI-RFQKINDRA-  158 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~~~~~~~~~-  158 (288)
                      ||+||..... ..+.+++++.+++|+.++..+++++...    .     .++||++||...+....... ....+++.. 
T Consensus        98 ih~A~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-----~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~  167 (379)
T 2c5a_A           98 FNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARIN----G-----IKRFFYASSACIYPEFKQLETTNVSLKESDA  167 (379)
T ss_dssp             EECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-----CSEEEEEEEGGGSCGGGSSSSSSCEECGGGG
T ss_pred             EECceecCcc-cccccCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEEeehheeCCCCCCCccCCCcCcccC
Confidence            9999975321 1124668889999999999999988532    1     35999999976543211100 001122221 


Q ss_pred             -CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHh------------
Q 023054          159 -GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSF------------  221 (288)
Q Consensus       159 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~------------  221 (288)
                       ...+...|+.+|.+.+.+++.++.+.   +  ++++++.||.+.++.....    .....+......            
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  242 (379)
T 2c5a_A          168 WPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL  242 (379)
T ss_dssp             SSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSC
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHH---C--CCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCC
Confidence             23456789999999999999988765   5  9999999999988764321    122222222211            


Q ss_pred             --hhcCChHHHHHHHHHHhcC
Q 023054          222 --FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 --~~~~~~~~~a~~~~~l~~~  240 (288)
                        ..+..++|+|+.+++++..
T Consensus       243 ~~~~~i~v~Dva~ai~~~l~~  263 (379)
T 2c5a_A          243 QTRSFTFIDECVEGVLRLTKS  263 (379)
T ss_dssp             CEECCEEHHHHHHHHHHHHHS
T ss_pred             eeEEEEEHHHHHHHHHHHhhc
Confidence              1123488999999999963

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.81  E-value=2.4e-19  Score=158.07  Aligned_cols=217  Identities=12%  Similarity=0.039  Sum_probs=151.7

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCC-ChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS-SIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++ |++|++++|+.+.......       ..++.++.+|++ |.+++.++++       ++|
T Consensus        28 lVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~-------~~d   93 (372)
T 3slg_A           28 LILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVK-------KCD   93 (372)
T ss_dssp             EEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHH-------HCS
T ss_pred             EEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhc-------cCC
Confidence            69999999999999999998 9999999998755432211       257999999999 9998888776       589


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+|+......  ..++..+.+++|+.++..+++++...          +.++|++||...+... ..   .++.+..
T Consensus        94 ~Vih~A~~~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~----------~~~~v~~SS~~vyg~~-~~---~~~~e~~  157 (372)
T 3slg_A           94 VILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVKY----------GKHLVFPSTSEVYGMC-AD---EQFDPDA  157 (372)
T ss_dssp             EEEECBCCCCHHH--HHHCHHHHHHHHTTTTHHHHHHHHHH----------TCEEEEECCGGGGBSC-CC---SSBCTTT
T ss_pred             EEEEcCccccHHH--HhhCHHHHHHHHHHHHHHHHHHHHHh----------CCcEEEeCcHHHhCCC-CC---CCCCccc
Confidence            9999999764321  23456788999999999998887543          2489999996543221 11   1111111


Q ss_pred             C-------CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC--------ChHHHHHHHHHHhh-
Q 023054          159 G-------YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH--------SAVVMRFLKFFSFF-  222 (288)
Q Consensus       159 ~-------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~~~~-  222 (288)
                      .       ..+...|+.+|.+.+.+++.++.+    +  ++++++.|+.+..+....        ......+....... 
T Consensus       158 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (372)
T 3slg_A          158 SALTYGPINKPRWIYACSKQLMDRVIWGYGME----G--LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGE  231 (372)
T ss_dssp             CCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----T--CEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTC
T ss_pred             cccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----C--CCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCC
Confidence            1       135568999999999988888765    5  999999999998775432        11222332222111 


Q ss_pred             ------------hcCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          223 ------------LWKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       223 ------------~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                                  .+...+|+|+.+++++..+ .....|..|+.+
T Consensus       232 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~~ni~  274 (372)
T 3slg_A          232 NISLVDGGSQKRAFTYVDDGISALMKIIENS-NGVATGKIYNIG  274 (372)
T ss_dssp             CEEEGGGGCCEEECEEHHHHHHHHHHHHHCG-GGTTTTEEEEEC
T ss_pred             CcEEeCCCceEEEEEEHHHHHHHHHHHHhcc-cCcCCCceEEeC
Confidence                        1236789999999999733 222456655543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.81  E-value=3.7e-19  Score=145.80  Aligned_cols=209  Identities=11%  Similarity=-0.048  Sum_probs=135.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+.+..+...        ..++.++.+|++|.++  +.       ..++|+|
T Consensus         4 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~--~~-------~~~~d~v   66 (224)
T 3h2s_A            4 AVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE--AD-------LDSVDAV   66 (224)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH--HH-------HTTCSEE
T ss_pred             EEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH--hh-------cccCCEE
Confidence            69999999999999999999999999999987755331        3468999999999887  11       2478999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||....     .    ....+|+.++..+++++.    +.      ++++|++||..+....+... ....+.....
T Consensus        67 i~~ag~~~~-----~----~~~~~n~~~~~~l~~a~~----~~------~~~~v~~SS~~~~~~~~~~~-~~~~~~~~~~  126 (224)
T 3h2s_A           67 VDALSVPWG-----S----GRGYLHLDFATHLVSLLR----NS------DTLAVFILGSASLAMPGADH-PMILDFPESA  126 (224)
T ss_dssp             EECCCCCTT-----S----SCTHHHHHHHHHHHHTCT----TC------CCEEEEECCGGGSBCTTCSS-CGGGGCCGGG
T ss_pred             EECCccCCC-----c----chhhHHHHHHHHHHHHHH----Hc------CCcEEEEecceeeccCCCCc-cccccCCCCC
Confidence            999998621     1    124567777766665553    22      36999999987765422210 0111111111


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHH--H-HHHHHHhhhcCChHHHHHHHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVM--R-FLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~--~-~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                      .+...|+.+|.+.+.+    .......+  ++++.|.||++.++..... ...  . ....-....+.+++|+|+.++++
T Consensus       127 ~~~~~y~~sK~~~e~~----~~~~~~~~--i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~  199 (224)
T 3h2s_A          127 ASQPWYDGALYQYYEY----QFLQMNAN--VNWIGISPSEAFPSGPATS-YVAGKDTLLVGEDGQSHITTGNMALAILDQ  199 (224)
T ss_dssp             GGSTTHHHHHHHHHHH----HHHTTCTT--SCEEEEEECSBCCCCCCCC-EEEESSBCCCCTTSCCBCCHHHHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHH----HHHHhcCC--CcEEEEcCccccCCCcccC-ceecccccccCCCCCceEeHHHHHHHHHHH
Confidence            2357799999997743    22223456  9999999999987622111 000  0 00000112346899999999999


Q ss_pred             hcCCCccCCCceeeccCcc
Q 023054          238 ALHPNLKGVTGKYFLDCNE  256 (288)
Q Consensus       238 ~~~~~~~~~tG~~~~~~~~  256 (288)
                      +.++.   ..|+.|..++.
T Consensus       200 l~~~~---~~g~~~~~~~~  215 (224)
T 3h2s_A          200 LEHPT---AIRDRIVVRDA  215 (224)
T ss_dssp             HHSCC---CTTSEEEEEEC
T ss_pred             hcCcc---ccCCEEEEecC
Confidence            97432   24666654443

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.81  E-value=5.9e-20  Score=162.45  Aligned_cols=208  Identities=13%  Similarity=0.032  Sum_probs=142.1

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++| ++|++++|+.....+   .+.   ...++.++.+|++|.+++.++++       ++|+
T Consensus        36 lVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~---~~~~v~~~~~Dl~d~~~l~~~~~-------~~d~  102 (377)
T 2q1s_A           36 MVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP---DHPAVRFSETSITDDALLASLQD-------EYDY  102 (377)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC---CCTTEEEECSCTTCHHHHHHCCS-------CCSE
T ss_pred             EEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc---CCCceEEEECCCCCHHHHHHHhh-------CCCE
Confidence            699999999999999999999 999999997643211   010   13568999999999887766543       7999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC--CC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN--DR  157 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~--~~  157 (288)
                      |||+||.....  .+.++++..+++|+.++..+++++...   ..     ..+||++||...+....    ..++.  +.
T Consensus       103 Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~-----~~~~V~~SS~~vyg~~~----~~~~~~~E~  168 (377)
T 2q1s_A          103 VFHLATYHGNQ--SSIHDPLADHENNTLTTLKLYERLKHF---KR-----LKKVVYSAAGCSIAEKT----FDDAKATEE  168 (377)
T ss_dssp             EEECCCCSCHH--HHHHCHHHHHHHHTHHHHHHHHHHTTC---SS-----CCEEEEEEEC------------------CC
T ss_pred             EEECCCccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHh---CC-----CCeEEEeCCHHHcCCCC----CCCcCcccc
Confidence            99999975321  223467889999999999999887421   01     35899999976442111    01112  22


Q ss_pred             C---CC-CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCC---------CC----ChHHHHHHHHHH
Q 023054          158 A---GY-SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLF---------KH----SAVVMRFLKFFS  220 (288)
Q Consensus       158 ~---~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~---------~~----~~~~~~~~~~~~  220 (288)
                      .   .. .+...|+.+|.+.+.+++.++.++   +  ++++++.||.+.++..         ..    ......+.....
T Consensus       169 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  243 (377)
T 2q1s_A          169 TDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---Q--LPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL  243 (377)
T ss_dssp             CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHH
T ss_pred             cccccccCCCCchHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHH
Confidence            1   22 456789999999999999988765   5  8999999999988765         21    112223332221


Q ss_pred             hh-------------hcCChHHHHHH-HHHHhcC
Q 023054          221 FF-------------LWKNVPQGAAT-TCYVALH  240 (288)
Q Consensus       221 ~~-------------~~~~~~~~a~~-~~~l~~~  240 (288)
                      ..             .+..++|+|+. +++++..
T Consensus       244 ~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~  277 (377)
T 2q1s_A          244 KGMPLPLENGGVATRDFIFVEDVANGLIACAADG  277 (377)
T ss_dssp             TTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHC
T ss_pred             cCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhc
Confidence            11             12237899999 9999963

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.80  E-value=3.2e-19  Score=155.23  Aligned_cols=177  Identities=15%  Similarity=0.090  Sum_probs=123.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|......+....+.... +.++.++.+|++|.+++.++++..     ++|+|
T Consensus         4 lVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~v   77 (338)
T 1udb_A            4 LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AIDTV   77 (338)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CCCEE
Confidence            699999999999999999999999999864321111112222211 346788999999999988887642     69999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||......  ..++..+.+++|+.++..+++++..    ..     .++||++||...+...    ...++++....
T Consensus        78 ih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~----~~-----~~~iv~~SS~~~~g~~----~~~~~~e~~~~  142 (338)
T 1udb_A           78 IHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAMRA----AN-----VKNFIFSSSATVYGDN----PKIPYVESFPT  142 (338)
T ss_dssp             EECCSCCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHH----HT-----CCEEEEEEEGGGGCSC----CSSSBCTTSCC
T ss_pred             EECCccCcccc--chhcHHHHHHHHHHHHHHHHHHHHh----cC-----CCeEEEEccHHHhCCC----CCCCcCcccCC
Confidence            99999753211  2244677899999999999886532    22     4699999997654211    11122222222


Q ss_pred             -CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCccc
Q 023054          161 -SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIM  202 (288)
Q Consensus       161 -~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~  202 (288)
                       ++...|+.||++.+.+++.++.+.  .+  +++..+.|+.+-
T Consensus       143 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~  181 (338)
T 1udb_A          143 GTPQSPYGKSKLMVEQILTDLQKAQ--PD--WSIALLRYFNPV  181 (338)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHS--TT--CEEEEEEECEEE
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHhc--CC--CceEEEeeceec
Confidence             236789999999999999998874  24  778778775553

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.80  E-value=3.8e-19  Score=156.04  Aligned_cols=206  Identities=11%  Similarity=-0.003  Sum_probs=146.7

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++| ++|++++|+.....  ...+      ..+. +.+|++|.++++.+++.  ..++++|+
T Consensus        50 lVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~------~~~~-~~~d~~~~~~~~~~~~~--~~~~~~d~  118 (357)
T 2x6t_A           50 IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL------VDLN-IADYMDKEDFLIQIMAG--EEFGDVEA  118 (357)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT------TTSC-CSEEEEHHHHHHHHHTT--CCCSSCCE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc------cCce-EeeecCcHHHHHHHHhh--cccCCCCE
Confidence            699999999999999999999 89999999764321  0111      1223 67899998888777653  12457999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||+||....    +.+++++.+++|+.++..+++++.+.    +     . +||++||...+....    ...+++...
T Consensus       119 Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~----~-----~-r~V~~SS~~v~g~~~----~~~~~E~~~  180 (357)
T 2x6t_A          119 IFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E-----I-PFLYASSAATYGGRT----SDFIESREY  180 (357)
T ss_dssp             EEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T-----C-CEEEEEEGGGGCSCS----SCCCSSGGG
T ss_pred             EEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc----C-----C-eEEEEcchHHhCCCC----CCCcCCcCC
Confidence            9999997643    44668899999999999999998762    1     4 899999987543211    112333334


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC----ChHHHHHHHHHH--------------h
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH----SAVVMRFLKFFS--------------F  221 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~--------------~  221 (288)
                      ..+...|+.+|.+.+.+++.++.++   +  +++++|.||.+.++....    ......+.....              .
T Consensus       181 ~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (357)
T 2x6t_A          181 EKPLNVFGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK  255 (357)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCE
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcce
Confidence            4556789999999999999887653   5  889999999998875431    112222222211              1


Q ss_pred             hhcCChHHHHHHHHHHhcC
Q 023054          222 FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~  240 (288)
                      ..+..++|+|+.+++++..
T Consensus       256 ~~~i~v~Dva~ai~~~~~~  274 (357)
T 2x6t_A          256 RDFVYVGDVADVNLWFLEN  274 (357)
T ss_dssp             ECEEEHHHHHHHHHHHHHH
T ss_pred             EccEEHHHHHHHHHHHHhc
Confidence            1235789999999999963

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.80  E-value=4.6e-19  Score=152.81  Aligned_cols=214  Identities=17%  Similarity=0.165  Sum_probs=145.6

Q ss_pred             CcccCCChhHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR--KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++  |++|++++|+....             ..+.++.+|++|.+++.++++..     ++|
T Consensus         3 lVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~-----~~d   64 (317)
T 3ajr_A            3 LVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEKY-----SID   64 (317)
T ss_dssp             EEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHHT-----TCC
T ss_pred             EEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhhc-----CCc
Confidence            69999999999999999998  89999999875321             13568899999999998887652     799


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+|+....   ...++++..+++|+.++..+++++.+.    +     .++||++||...+.....   ....++..
T Consensus        65 ~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~~v~~SS~~~~~~~~~---~~~~~e~~  129 (317)
T 3ajr_A           65 AIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQH----R-----VEKVVIPSTIGVFGPETP---KNKVPSIT  129 (317)
T ss_dssp             EEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-----CCEEEEEEEGGGCCTTSC---SSSBCSSS
T ss_pred             EEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHHc----C-----CCEEEEecCHHHhCCCCC---CCCccccc
Confidence            99999997532   123457889999999999999987542    1     359999999876543111   11222333


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccC-CCCCC---Ch-HHHHHHHHHHhh-----------
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT-NLFKH---SA-VVMRFLKFFSFF-----------  222 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t-~~~~~---~~-~~~~~~~~~~~~-----------  222 (288)
                      ...+...|+.+|.+.+.+++.++.+.   +  ++++++.|+.+-. .....   .. ....+.+.....           
T Consensus       130 ~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (317)
T 3ajr_A          130 ITRPRTMFGVTKIAAELLGQYYYEKF---G--LDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRA  204 (317)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCC
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHhc---C--CeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccce
Confidence            34467889999999999999887654   5  8899997555533 22111   11 111122221111           


Q ss_pred             -hcCChHHHHHHHHHHhcCCCccCCCceeec
Q 023054          223 -LWKNVPQGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       223 -~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                       .+...+|+|+.++.++.++.....+|..|+
T Consensus       205 ~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~  235 (317)
T 3ajr_A          205 LPMMYMPDALKALVDLYEADRDKLVLRNGYN  235 (317)
T ss_dssp             EEEEEHHHHHHHHHHHHHCCGGGCSSCSCEE
T ss_pred             eeeeEHHHHHHHHHHHHhCCccccccCceEe
Confidence             112468999999999864444333444443

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.80  E-value=2.5e-19  Score=154.10  Aligned_cols=206  Identities=15%  Similarity=0.098  Sum_probs=146.3

Q ss_pred             CcccCCChhHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR--KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++  |++|++++|+....+     +.     .++.++.+|++|.+++.+++++.     ++|
T Consensus         6 lVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~~-----~~d   70 (312)
T 2yy7_A            6 LIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEVH-----KIT   70 (312)
T ss_dssp             EEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHHT-----TCC
T ss_pred             EEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhhc-----CCC
Confidence            69999999999999999999  899999999765421     11     13678899999999988887653     699


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+||.....   ..+++++.+++|+.++..+++++.+.    +     .+++|++||...+.....   ....++..
T Consensus        71 ~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~SS~~~~~~~~~---~~~~~e~~  135 (312)
T 2yy7_A           71 DIYLMAALLSAT---AEKNPAFAWDLNMNSLFHVLNLAKAK----K-----IKKIFWPSSIAVFGPTTP---KENTPQYT  135 (312)
T ss_dssp             EEEECCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHTT----S-----CSEEECCEEGGGCCTTSC---SSSBCSSC
T ss_pred             EEEECCccCCCc---hhhChHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEeccHHHhCCCCC---CCCccccC
Confidence            999999975321   22457889999999999999887542    1     359999999876542111   11223333


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----h-HHHHHHHHHHhh-----------
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----A-VVMRFLKFFSFF-----------  222 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~-~~~~~~~~~~~~-----------  222 (288)
                      ...+...|+.+|.+.+.+++.++.++   +  ++++++.||.+..+.....    . ....+.+.....           
T Consensus       136 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (312)
T 2yy7_A          136 IMEPSTVYGISKQAGERWCEYYHNIY---G--VDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETK  210 (312)
T ss_dssp             BCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCC
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHhc---C--CcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCce
Confidence            34556789999999999999888765   5  8999999999987542111    1 112222222111           


Q ss_pred             -hcCChHHHHHHHHHHhcCC
Q 023054          223 -LWKNVPQGAATTCYVALHP  241 (288)
Q Consensus       223 -~~~~~~~~a~~~~~l~~~~  241 (288)
                       .+...+|+|+.++.++..+
T Consensus       211 ~~~i~v~Dva~a~~~~~~~~  230 (312)
T 2yy7_A          211 MPMMYMDDAIDATINIMKAP  230 (312)
T ss_dssp             EEEEEHHHHHHHHHHHHHSC
T ss_pred             eeeeeHHHHHHHHHHHHhCc
Confidence             1124589999999999743

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.79  E-value=1e-18  Score=148.95  Aligned_cols=184  Identities=17%  Similarity=0.172  Sum_probs=133.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||+++++.|+++|++|++++|+                       .+|++|.+++.++++..     ++|+|
T Consensus        16 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~-----~~d~v   67 (292)
T 1vl0_A           16 LITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK-----KPNVV   67 (292)
T ss_dssp             EEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc-----CCCEE
Confidence            699999999999999999999999999986                       27999999998888765     79999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||....  ..+.+++++.+++|+.++..+++++.+.          +.+||++||...+....    ..++++....
T Consensus        68 ih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~----------~~~iv~~SS~~v~~~~~----~~~~~E~~~~  131 (292)
T 1vl0_A           68 INCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYVFDGEA----KEPITEFDEV  131 (292)
T ss_dssp             EECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCSCC----SSCBCTTSCC
T ss_pred             EECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEechHHeECCCC----CCCCCCCCCC
Confidence            999997532  1233567889999999999999998652          24999999986543211    1223333444


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh-----------hhcCChHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF-----------FLWKNVPQ  229 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  229 (288)
                      .+...|+.+|.+.+.+++.++.         .+..+.|+.+.++ ...  ....+......           ..+..++|
T Consensus       132 ~~~~~Y~~sK~~~E~~~~~~~~---------~~~~lR~~~v~G~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  199 (292)
T 1vl0_A          132 NPQSAYGKTKLEGENFVKALNP---------KYYIVRTAWLYGD-GNN--FVKTMINLGKTHDELKVVHDQVGTPTSTVD  199 (292)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEESS-SSC--HHHHHHHHHHHCSEEEEESSCEECCEEHHH
T ss_pred             CCccHHHHHHHHHHHHHHhhCC---------CeEEEeeeeeeCC-CcC--hHHHHHHHHhcCCcEEeecCeeeCCccHHH
Confidence            4567899999999998887643         2455677777655 222  22222222111           12235899


Q ss_pred             HHHHHHHHhcC
Q 023054          230 GAATTCYVALH  240 (288)
Q Consensus       230 ~a~~~~~l~~~  240 (288)
                      +|+.+++++..
T Consensus       200 va~~~~~~~~~  210 (292)
T 1vl0_A          200 LARVVLKVIDE  210 (292)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999999963

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.78  E-value=4.4e-18  Score=154.96  Aligned_cols=208  Identities=17%  Similarity=0.149  Sum_probs=142.2

Q ss_pred             CcccCCChhHHHHHHHHHHC---CCEEEEEeCChHHHHHHHHHHHhhCC--------------CCceEEEEecCC-----
Q 023054            1 MLAGGASGIGLETARVLALR---KAHVIIAARNMAAANEARQLILKEDD--------------TARVDTLKLDLS-----   58 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~---G~~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~Dl~-----   58 (288)
                      |||||+|+||++++++|+++   |++|++++|+...... ...+.....              ..++.++.+|++     
T Consensus        77 LVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~g  155 (478)
T 4dqv_A           77 LLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLG  155 (478)
T ss_dssp             EEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGG
T ss_pred             EEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccC
Confidence            69999999999999999999   9999999998664422 222222111              257999999999     


Q ss_pred             -ChHHHHHHHHHHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEc
Q 023054           59 -SIASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLS  137 (288)
Q Consensus        59 -~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vs  137 (288)
                       +.+.+.++++       ++|+||||||....      +.+++.+.+|+.++..+++++...    +     ..+||++|
T Consensus       156 ld~~~~~~~~~-------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~aa~~~----~-----~~~~V~iS  213 (478)
T 4dqv_A          156 LDQPMWRRLAE-------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRIALTT----K-----LKPFTYVS  213 (478)
T ss_dssp             CCHHHHHHHHH-------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHHHTSS----S-----CCCEEEEE
T ss_pred             CCHHHHHHHHc-------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHHHHhC----C-----CCeEEEEe
Confidence             5456666554       58999999998643      567789999999999999887531    1     35899999


Q ss_pred             CccccccccCCccccCCCCCCCC-----------CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCC
Q 023054          138 SIAHQYTYKGGIRFQKINDRAGY-----------SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLF  206 (288)
Q Consensus       138 S~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~  206 (288)
                      |...+....    ...+.+....           .....|+.||.+.+.+++.++.+.   +  ++++++.||.|..+-.
T Consensus       214 S~~v~~~~~----~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ivRpg~v~G~~~  284 (478)
T 4dqv_A          214 TADVGAAIE----PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---A--LPVAVFRCGMILADTS  284 (478)
T ss_dssp             EGGGGTTSC----TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECCSS
T ss_pred             ehhhcCccC----CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---C--CCeEEEECceeeCCCc
Confidence            976432211    1112221111           122459999999999999888765   5  8899999999976522


Q ss_pred             -----CCChHHHHHHHHHHh-h--------------------hcCChHHHHHHHHHHhcC
Q 023054          207 -----KHSAVVMRFLKFFSF-F--------------------LWKNVPQGAATTCYVALH  240 (288)
Q Consensus       207 -----~~~~~~~~~~~~~~~-~--------------------~~~~~~~~a~~~~~l~~~  240 (288)
                           ....+...+...... .                    -+...+|+|+.++.++..
T Consensus       285 ~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~  344 (478)
T 4dqv_A          285 YAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGAR  344 (478)
T ss_dssp             SSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHT
T ss_pred             cCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhh
Confidence                 222233333222111 1                    124567999999999863

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.78  E-value=2e-18  Score=146.81  Aligned_cols=185  Identities=15%  Similarity=0.114  Sum_probs=137.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||+++++.|+++|++|++++|.                       .+|++|.+++.++++..     ++|+|
T Consensus         9 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~d~v   60 (287)
T 3sc6_A            9 IITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RPHII   60 (287)
T ss_dssp             EEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CCCEE
Confidence            699999999999999999999999999982                       37999999999888865     79999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+||....  ....++++..+++|+.++..+++++.+.          +.++|++||...+...    ...++++....
T Consensus        61 i~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~vy~~~----~~~~~~E~~~~  124 (287)
T 3sc6_A           61 IHCAAYTKV--DQAEKERDLAYVINAIGARNVAVASQLV----------GAKLVYISTDYVFQGD----RPEGYDEFHNP  124 (287)
T ss_dssp             EECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCCC----CSSCBCTTSCC
T ss_pred             EECCcccCh--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchhhhcCCC----CCCCCCCCCCC
Confidence            999998643  1233678899999999999999988542          3589999998654321    12234455556


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh-----------hhcCChHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF-----------FLWKNVPQ  229 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  229 (288)
                      .+...|+.+|.+.+.+++.++.         +++.+.|+.+.++....  ....+......           ..+..++|
T Consensus       125 ~p~~~Y~~sK~~~E~~~~~~~~---------~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  193 (287)
T 3sc6_A          125 APINIYGASKYAGEQFVKELHN---------KYFIVRTSWLYGKYGNN--FVKTMIRLGKEREEISVVADQIGSPTYVAD  193 (287)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEECSSSCC--HHHHHHHHHTTCSEEEEECSCEECCEEHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHhCC---------CcEEEeeeeecCCCCCc--HHHHHHHHHHcCCCeEeecCcccCceEHHH
Confidence            6778999999999988877643         24678899987765433  22233322211           11224899


Q ss_pred             HHHHHHHHhcC
Q 023054          230 GAATTCYVALH  240 (288)
Q Consensus       230 ~a~~~~~l~~~  240 (288)
                      +|+.+++++..
T Consensus       194 va~~~~~~~~~  204 (287)
T 3sc6_A          194 LNVMINKLIHT  204 (287)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHhC
Confidence            99999999964

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.78  E-value=1.5e-18  Score=146.35  Aligned_cols=186  Identities=18%  Similarity=0.156  Sum_probs=133.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+ +|++|++++|+.+.        .   ++     +.+|++|.+++.++++..     ++|+|
T Consensus         4 lVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~--------~---~~-----~~~Dl~~~~~~~~~~~~~-----~~d~v   61 (273)
T 2ggs_A            4 LITGASGQLGIELSRLLS-ERHEVIKVYNSSEI--------Q---GG-----YKLDLTDFPRLEDFIIKK-----RPDVI   61 (273)
T ss_dssp             EEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC--------T---TC-----EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCChhHHHHHHHHh-cCCeEEEecCCCcC--------C---CC-----ceeccCCHHHHHHHHHhc-----CCCEE
Confidence            699999999999999999 58999999998631        0   12     789999999999988765     69999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||....  ..+.+++++.+++|+.++..+++++.+    .      +++||++||...+...+.     .+.+....
T Consensus        62 i~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~----~------~~~iv~~SS~~~~~~~~~-----~~~e~~~~  124 (273)
T 2ggs_A           62 INAAAMTDV--DKCEIEKEKAYKINAEAVRHIVRAGKV----I------DSYIVHISTDYVFDGEKG-----NYKEEDIP  124 (273)
T ss_dssp             EECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----T------TCEEEEEEEGGGSCSSSC-----SBCTTSCC
T ss_pred             EECCcccCh--hhhhhCHHHHHHHhHHHHHHHHHHHHH----h------CCeEEEEecceeEcCCCC-----CcCCCCCC
Confidence            999997542  123457889999999999999999864    1      359999999887643221     23333334


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHH----------hhhcCChHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFS----------FFLWKNVPQG  230 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~----------~~~~~~~~~~  230 (288)
                      .+...|+.+|++++.+++.    +....  +|++.|. |  .+++      ...+.....          ...+..++|+
T Consensus       125 ~~~~~Y~~sK~~~e~~~~~----~~~~~--iR~~~v~-G--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  189 (273)
T 2ggs_A          125 NPINYYGLSKLLGETFALQ----DDSLI--IRTSGIF-R--NKGF------PIYVYKTLKEGKTVFAFKGYYSPISARKL  189 (273)
T ss_dssp             CCSSHHHHHHHHHHHHHCC----TTCEE--EEECCCB-S--SSSH------HHHHHHHHHTTCCEEEESCEECCCBHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhC----CCeEE--Eeccccc-c--ccHH------HHHHHHHHHcCCCEEeecCCCCceEHHHH
Confidence            4567899999999998876    22223  6666665 4  2221      112211111          1234679999


Q ss_pred             HHHHHHHhcC
Q 023054          231 AATTCYVALH  240 (288)
Q Consensus       231 a~~~~~l~~~  240 (288)
                      |+.+++++..
T Consensus       190 a~~i~~~~~~  199 (273)
T 2ggs_A          190 ASAILELLEL  199 (273)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            9999999973

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.77  E-value=1.8e-20  Score=152.62  Aligned_cols=179  Identities=16%  Similarity=0.102  Sum_probs=132.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++|+  +|++++|++..          .  ..++.++.+|++|.+++.+++         +|
T Consensus         9 lVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~~~---------~d   67 (215)
T 2a35_A            9 LLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLDGS---------ID   67 (215)
T ss_dssp             EEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCCSC---------CS
T ss_pred             EEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHHhh---------hc
Confidence            6899999999999999999998  99999998753          1  346888899998876554433         89


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||||||....    +.+++++.+++|+.++..+++++.+.    .     .++||++||.....               
T Consensus        68 ~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~Ss~~~~~---------------  119 (215)
T 2a35_A           68 TAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM----G-----ARHYLVVSALGADA---------------  119 (215)
T ss_dssp             EEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT----T-----CCEEEEECCTTCCT---------------
T ss_pred             EEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHHc----C-----CCEEEEECCcccCC---------------
Confidence            99999997532    23567889999999999999887542    2     35899999987542               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceE-EEEeeCCcccCCCCCCChHHHHHH----HHH-HhhhcCChHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNIT-ANSVHPGLIMTNLFKHSAVVMRFL----KFF-SFFLWKNVPQGAA  232 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~-v~~v~PG~v~t~~~~~~~~~~~~~----~~~-~~~~~~~~~~~a~  232 (288)
                        .+...|+.+|.+++.+++.       .+  ++ ++.+.||++.++..... +...+.    ... ....+.+++|+|+
T Consensus       120 --~~~~~y~~sK~~~e~~~~~-------~~--~~~~~~vrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~  187 (215)
T 2a35_A          120 --KSSIFYNRVKGELEQALQE-------QG--WPQLTIARPSLLFGPREEFR-LAEILAAPIARILPGKYHGIEACDLAR  187 (215)
T ss_dssp             --TCSSHHHHHHHHHHHHHTT-------SC--CSEEEEEECCSEESTTSCEE-GGGGTTCCCC----CHHHHHHHHHHHH
T ss_pred             --CCccHHHHHHHHHHHHHHH-------cC--CCeEEEEeCceeeCCCCcch-HHHHHHHhhhhccCCCcCcEeHHHHHH
Confidence              2446899999999888764       25  88 99999999988754311 000000    000 0223457899999


Q ss_pred             HHHHHhcC
Q 023054          233 TTCYVALH  240 (288)
Q Consensus       233 ~~~~l~~~  240 (288)
                      .+++++.+
T Consensus       188 ~~~~~~~~  195 (215)
T 2a35_A          188 ALWRLALE  195 (215)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHhc
Confidence            99999964

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.77  E-value=3.5e-18  Score=161.57  Aligned_cols=217  Identities=11%  Similarity=0.016  Sum_probs=149.9

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHH-HHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS-IKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++ |++|++++|+....+...       ...++.++.+|++|.++ +.++++       ++|
T Consensus       319 LVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~v~~Dl~d~~~~~~~~~~-------~~D  384 (660)
T 1z7e_A          319 LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------KCD  384 (660)
T ss_dssp             EEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-------TCTTEEEEECCTTTCHHHHHHHHH-------HCS
T ss_pred             EEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-------cCCceEEEECCCCCcHHHHHHhhc-------CCC
Confidence            69999999999999999998 899999999875432211       13568999999999765 555554       589


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+||......  ..+++++.+++|+.++..+++++...          +.++|++||...+.....    ..+++..
T Consensus       385 ~Vih~Aa~~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~----------~~r~V~~SS~~vyg~~~~----~~~~E~~  448 (660)
T 1z7e_A          385 VVLPLVAIATPIE--YTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCSD----KYFDEDH  448 (660)
T ss_dssp             EEEECCCCCCTHH--HHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCCS----SSBCTTT
T ss_pred             EEEECceecCccc--cccCHHHHHHhhhHHHHHHHHHHHHh----------CCEEEEEecHHHcCCCCC----cccCCCc
Confidence            9999999764321  12456789999999999998887542          259999999765432111    1111211


Q ss_pred             C-------CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC--------ChHHHHHHHHHHh--
Q 023054          159 G-------YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH--------SAVVMRFLKFFSF--  221 (288)
Q Consensus       159 ~-------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~~~--  221 (288)
                      .       ..+...|+.+|.+.+.+++.++++.   +  ++++++.||.+.++....        ......+......  
T Consensus       449 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~  523 (660)
T 1z7e_A          449 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS  523 (660)
T ss_dssp             CCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTC
T ss_pred             cccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCC
Confidence            1       1344579999999999999988765   5  899999999998876432        1112222222211  


Q ss_pred             -----------hhcCChHHHHHHHHHHhcCCCccCCCceeecc
Q 023054          222 -----------FLWKNVPQGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       222 -----------~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                                 ..+..++|+|+.+++++. ......+|+.|+.
T Consensus       524 ~~~~~g~g~~~~~~i~v~Dva~ai~~~l~-~~~~~~~g~~~ni  565 (660)
T 1z7e_A          524 PIKLIDGGKQKRCFTDIRDGIEALYRIIE-NAGNRCDGEIINI  565 (660)
T ss_dssp             CEEEEGGGCCEEECEEHHHHHHHHHHHHH-CGGGTTTTEEEEE
T ss_pred             CcEEeCCCCeEEEEEEHHHHHHHHHHHHh-CccccCCCeEEEE
Confidence                       112358899999999996 3333456766653

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.77  E-value=1.4e-18  Score=149.11  Aligned_cols=206  Identities=12%  Similarity=0.005  Sum_probs=142.9

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++| ++|++++|+.....  ...+.    .  +. +.+|+++.++++.+++..  ..+++|+
T Consensus         3 lVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~--~~-~~~d~~~~~~~~~~~~~~--~~~~~d~   71 (310)
T 1eq2_A            3 IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----D--LN-IADYMDKEDFLIQIMAGE--EFGDVEA   71 (310)
T ss_dssp             EEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----T--SC-CSEEEEHHHHHHHHHTTC--CCSSCCE
T ss_pred             EEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----c--ce-eccccccHHHHHHHHhcc--ccCCCcE
Confidence            699999999999999999999 89999998764321  11111    1  22 678999888777765421  0236999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||+||....    +.++++..+++|+.++..+++++.+.    +     . ++|++||...+....    ...+++...
T Consensus        72 vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~-~~v~~SS~~v~g~~~----~~~~~E~~~  133 (310)
T 1eq2_A           72 IFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E-----I-PFLYASSAATYGGRT----SDFIESREY  133 (310)
T ss_dssp             EEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T-----C-CEEEEEEGGGGTTCC----SCBCSSGGG
T ss_pred             EEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc----C-----C-eEEEEeeHHHhCCCC----CCCCCCCCC
Confidence            9999997643    34567889999999999999988642    1     4 899999986543211    112333334


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC----ChHHHHHHHH---------HH-----h
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH----SAVVMRFLKF---------FS-----F  221 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~----~~~~~~~~~~---------~~-----~  221 (288)
                      ..+...|+.+|.+.+.+++.++.+.   +  ++++++.||.+.++....    ......+.+.         ..     .
T Consensus       134 ~~p~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  208 (310)
T 1eq2_A          134 EKPLNVYGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK  208 (310)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------C
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcce
Confidence            4556789999999999998887653   5  889999999998876431    1111111111         11     1


Q ss_pred             hhcCChHHHHHHHHHHhcC
Q 023054          222 FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~  240 (288)
                      ..+...+|+|+.+++++..
T Consensus       209 ~~~i~v~Dva~~~~~~~~~  227 (310)
T 1eq2_A          209 RDFVYVGDVADVNLWFLEN  227 (310)
T ss_dssp             BCEEEHHHHHHHHHHHHHH
T ss_pred             EccEEHHHHHHHHHHHHhc
Confidence            2234678999999999963

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.76  E-value=1.1e-17  Score=145.81  Aligned_cols=207  Identities=11%  Similarity=0.031  Sum_probs=139.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+..........+   ....++.++.+|+.+..            ..++|+|
T Consensus        31 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~------------~~~~d~v   95 (343)
T 2b69_A           31 LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL------------YIEVDQI   95 (343)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC------------CCCCSEE
T ss_pred             EEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh------------hcCCCEE
Confidence            69999999999999999999999999998643211111111   11346899999998752            3579999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC-CccccCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG-GIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~~~~~~~~~~~  159 (288)
                      ||+||......  ..++++..+++|+.++..+++++...          +.++|++||...+..... ......+.....
T Consensus        96 ih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~  163 (343)
T 2b69_A           96 YHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEVYGDPEVHPQSEDYWGHVNP  163 (343)
T ss_dssp             EECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCS
T ss_pred             EECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHh----------CCcEEEECcHHHhCCCCCCCCcccccccCCC
Confidence            99999754211  12456788999999999999988542          248999999765422110 011111111123


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCC--ChHHHHHHHHHHh-------------hhc
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH--SAVVMRFLKFFSF-------------FLW  224 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~-------------~~~  224 (288)
                      ..+...|+.+|++.+.+++.++.+.   +  ++++++.||.+.++....  ......+......             ..+
T Consensus       164 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (343)
T 2b69_A          164 IGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAF  238 (343)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEEC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEee
Confidence            4456789999999999999988764   5  889999999998875432  1122222222111             112


Q ss_pred             CChHHHHHHHHHHhc
Q 023054          225 KNVPQGAATTCYVAL  239 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~  239 (288)
                      ..++|+|+.+++++.
T Consensus       239 v~v~Dva~a~~~~~~  253 (343)
T 2b69_A          239 QYVSDLVNGLVALMN  253 (343)
T ss_dssp             EEHHHHHHHHHHHHT
T ss_pred             EeHHHHHHHHHHHHh
Confidence            367899999999986

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.75  E-value=4.7e-18  Score=145.26  Aligned_cols=187  Identities=14%  Similarity=0.071  Sum_probs=136.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+ +|++|++++|+..                   ++.+|++|.+++.++++..     ++|+|
T Consensus         4 lVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~d~v   58 (299)
T 1n2s_A            4 LLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RPDVI   58 (299)
T ss_dssp             EEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence            699999999999999999 8999999999751                   3568999999998887754     68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+||.....  ...+++++.+++|+.++..+++++..    .      +.++|++||...+....    ..++++....
T Consensus        59 ih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~----~------~~~~v~~SS~~vy~~~~----~~~~~E~~~~  122 (299)
T 1n2s_A           59 VNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANE----T------GAWVVHYSTDYVFPGTG----DIPWQETDAT  122 (299)
T ss_dssp             EECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTT----T------TCEEEEEEEGGGSCCCT----TCCBCTTSCC
T ss_pred             EECcccCCHh--hhhcCHHHHHHHHHHHHHHHHHHHHH----c------CCcEEEEecccEEeCCC----CCCCCCCCCC
Confidence            9999975321  23456788999999999999988743    1      24899999986543211    1223344444


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhh----h-------cCChHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFF----L-------WKNVPQ  229 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~----~-------~~~~~~  229 (288)
                      .+...|+.+|.+.+.+++.++.         +++.+.||.+.++....  ....+.+.....    .       +..++|
T Consensus       123 ~p~~~Y~~sK~~~E~~~~~~~~---------~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  191 (299)
T 1n2s_A          123 SPLNVYGKTKLAGEKALQDNCP---------KHLIFRTSWVYAGKGNN--FAKTMLRLAKERQTLSVINDQYGAPTGAEL  191 (299)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEECSSSCC--HHHHHHHHHHHCSEEEEECSCEECCEEHHH
T ss_pred             CCccHHHHHHHHHHHHHHHhCC---------CeEEEeeeeecCCCcCc--HHHHHHHHHhcCCCEEeecCcccCCeeHHH
Confidence            5567899999999988877542         46779999998876442  222222222111    1       123799


Q ss_pred             HHHHHHHHhc
Q 023054          230 GAATTCYVAL  239 (288)
Q Consensus       230 ~a~~~~~l~~  239 (288)
                      +|+.+++++.
T Consensus       192 va~~~~~~~~  201 (299)
T 1n2s_A          192 LADCTAHAIR  201 (299)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999996

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.74  E-value=2.3e-18  Score=148.52  Aligned_cols=202  Identities=16%  Similarity=-0.001  Sum_probs=136.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+..........+.......++.++.+|++                 ++|+|
T Consensus        11 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------------~~d~v   73 (321)
T 3vps_A           11 LITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------------DVRLV   73 (321)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------------TEEEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------------cCCEE
Confidence            6999999999999999999999999999976510000001111011234555666665                 79999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+......  ..+.....++ |+.++..+++++...-         -.+||++||...+...    ...++++....
T Consensus        74 i~~a~~~~~~~--~~~~~~~~~~-n~~~~~~ll~a~~~~~---------v~~~v~~SS~~v~~~~----~~~~~~E~~~~  137 (321)
T 3vps_A           74 YHLASHKSVPR--SFKQPLDYLD-NVDSGRHLLALCTSVG---------VPKVVVGSTCEVYGQA----DTLPTPEDSPL  137 (321)
T ss_dssp             EECCCCCCHHH--HTTSTTTTHH-HHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCSC----SSSSBCTTSCC
T ss_pred             EECCccCChHH--HHhCHHHHHH-HHHHHHHHHHHHHHcC---------CCeEEEecCHHHhCCC----CCCCCCCCCCC
Confidence            99999764311  2233455677 9999999888885431         2599999998754321    22234455555


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCce-EEEEeeCCcccCCCCCCChHHHHHHHHHHhh-------------hcCC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNI-TANSVHPGLIMTNLFKHSAVVMRFLKFFSFF-------------LWKN  226 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-------------~~~~  226 (288)
                      .+...|+.+|.+.+.+++.++.+.   +  + +++.+.|+.+.++..........+.......             .+..
T Consensus       138 ~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  212 (321)
T 3vps_A          138 SPRSPYAASKVGLEMVAGAHQRAS---V--APEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTY  212 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHSS---S--SCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc---C--CCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEE
Confidence            677889999999999998888764   4  7 8999999999887655332233333222111             1236


Q ss_pred             hHHHHHHHHHHhcC
Q 023054          227 VPQGAATTCYVALH  240 (288)
Q Consensus       227 ~~~~a~~~~~l~~~  240 (288)
                      ++|+|+.+++++..
T Consensus       213 v~Dva~~~~~~~~~  226 (321)
T 3vps_A          213 ITDVVDKLVALANR  226 (321)
T ss_dssp             HHHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHHHhc
Confidence            78999999999974

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.74  E-value=9.5e-18  Score=159.66  Aligned_cols=184  Identities=15%  Similarity=0.109  Sum_probs=129.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|++++|+.....+....+.... ..++.++.+|++|.+++.++++..     ++|+|
T Consensus        15 lVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~-----~~D~V   88 (699)
T 1z45_A           15 LVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-----KIDSV   88 (699)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-----CCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC-----CCCEE
Confidence            699999999999999999999999999986543222222222111 346888999999999988887653     79999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||......  ..+...+.+++|+.++..+++++..    .+     .++||++||...+..........++.+....
T Consensus        89 ih~A~~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-----~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~  157 (699)
T 1z45_A           89 IHFAGLKAVGE--STQIPLRYYHNNILGTVVLLELMQQ----YN-----VSKFVFSSSATVYGDATRFPNMIPIPEECPL  157 (699)
T ss_dssp             EECCSCCCHHH--HHHSHHHHHHHHHHHHHHHHHHHHH----HT-----CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC
T ss_pred             EECCcccCcCc--cccCHHHHHHHHHHHHHHHHHHHHH----cC-----CCEEEEECcHHHhCCCccccccCCccccCCC
Confidence            99999754211  1233467899999999998876643    22     4699999997654221100011123333344


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN  204 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~  204 (288)
                      .+...|+.+|++++.+++.++.+. ..+  +++..+.|+.+-.+
T Consensus       158 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~g--~~~~ilR~~~vyG~  198 (699)
T 1z45_A          158 GPTNPYGHTKYAIENILNDLYNSD-KKS--WKFAILRYFNPIGA  198 (699)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHS-TTS--CEEEEEEECEEECC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHhc-cCC--CcEEEEEeccccCC
Confidence            456789999999999999988775 345  88889998877544

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.74  E-value=2.6e-17  Score=151.03  Aligned_cols=210  Identities=13%  Similarity=0.048  Sum_probs=141.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH---HHHHHHHHHhh-------CCCCceEEEEecCCChHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA---ANEARQLILKE-------DDTARVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~---~~~~~~~~~~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |||||||+||++++++|.++|++|++++|+...   .+++.+.+...       ....++.++.+|+++.+++.      
T Consensus       154 LVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~------  227 (508)
T 4f6l_B          154 LLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV------  227 (508)
T ss_dssp             EESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC------
T ss_pred             EEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC------
Confidence            699999999999999999999999999998763   22333332211       11467999999999977666      


Q ss_pred             HhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC-Cc
Q 023054           71 IALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG-GI  149 (288)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~  149 (288)
                        ...++|+|||||+....     ...++..+.+|+.++..+++++..   .       ..++|++||... ..... ..
T Consensus       228 --~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~---~-------~~~~v~iSS~~v-G~~~~~~~  289 (508)
T 4f6l_B          228 --LPENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ---H-------HARLIYVSTISV-GTYFDIDT  289 (508)
T ss_dssp             --CSSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT---T-------TCEEEEEEESCT-TSEECTTC
T ss_pred             --CccCCCEEEECCceecC-----CCCHHHHhhhHHHHHHHHHHHHHh---C-------CCcEEEeCChhh-ccCCccCC
Confidence              34589999999997632     235678899999999999998865   1       468999999876 11100 00


Q ss_pred             cccCCCCCCC---CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------hHHHHHHHHH
Q 023054          150 RFQKINDRAG---YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------AVVMRFLKFF  219 (288)
Q Consensus       150 ~~~~~~~~~~---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~  219 (288)
                      ...++.+...   ..+...|+.+|.+.+.+++.++.    .|  ++++.+.||.+.++.....       .....+.+..
T Consensus       290 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--i~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~  363 (508)
T 4f6l_B          290 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDL  363 (508)
T ss_dssp             SCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TT--CEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHH
T ss_pred             cCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cC--CCEEEEecceeccCCCCCcccCCcchHHHHHHHHHH
Confidence            1111222211   23567899999999998887653    46  9999999999977754332       1122333322


Q ss_pred             Hhh------------hcCChHHHHHHHHHHhcC
Q 023054          220 SFF------------LWKNVPQGAATTCYVALH  240 (288)
Q Consensus       220 ~~~------------~~~~~~~~a~~~~~l~~~  240 (288)
                      ...            .+...+|+|+.+++++..
T Consensus       364 ~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~  396 (508)
T 4f6l_B          364 LQLDCIGVSMAEMPVDFSFVDTTARQIVALAQV  396 (508)
T ss_dssp             TTCSEEETTGGGSEEECEEHHHHHHHHHHHTTB
T ss_pred             HHcCCCCCCccCceEEEEcHHHHHHHHHHHHhC
Confidence            111            123568999999999964

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.73  E-value=8.8e-17  Score=138.71  Aligned_cols=195  Identities=16%  Similarity=0.107  Sum_probs=138.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|++|+++.|+.                      .+|++|.+++.++++..     ++|+|
T Consensus         7 lVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----~~d~v   59 (321)
T 1e6u_A            7 FIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----RIDQV   59 (321)
T ss_dssp             EEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----CCCEE
Confidence            6999999999999999999999999988762                      26999999998887764     69999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC--
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA--  158 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~--  158 (288)
                      ||+|+..... ....++.++.+++|+.++..+++++...    +     ..++|++||...+....    ..++++..  
T Consensus        60 ih~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~SS~~vyg~~~----~~~~~E~~~~  125 (321)
T 1e6u_A           60 YLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQN----D-----VNKLLFLGSSCIYPKLA----KQPMAESELL  125 (321)
T ss_dssp             EECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-----CCEEEEECCGGGSCTTC----CSSBCGGGTT
T ss_pred             EEcCeecCCc-chhhhCHHHHHHHHHHHHHHHHHHHHHh----C-----CCeEEEEccHHHcCCCC----CCCcCccccc
Confidence            9999975321 1123456788999999999999887542    1     35999999986543211    11122221  


Q ss_pred             --CCCc-cccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHh-------h--
Q 023054          159 --GYSD-KKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSF-------F--  222 (288)
Q Consensus       159 --~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~-------~--  222 (288)
                        ...+ ...|+.+|.+.+.+++.++.+.   +  ++++++.||.+.++.....    .....+...+..       .  
T Consensus       126 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  200 (321)
T 1e6u_A          126 QGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVV  200 (321)
T ss_dssp             SSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEE
T ss_pred             cCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceE
Confidence              1223 3589999999999999988765   5  8999999999987754321    122222222211       0  


Q ss_pred             ---------hcCChHHHHHHHHHHhcCC
Q 023054          223 ---------LWKNVPQGAATTCYVALHP  241 (288)
Q Consensus       223 ---------~~~~~~~~a~~~~~l~~~~  241 (288)
                               .+...+|+|+.++.++..+
T Consensus       201 ~~~~g~~~~~~i~v~Dva~~~~~~~~~~  228 (321)
T 1e6u_A          201 VWGSGTPMREFLHVDDMAAASIHVMELA  228 (321)
T ss_dssp             EESCSCCEECEEEHHHHHHHHHHHHHSC
T ss_pred             EcCCCCEEEEeEEHHHHHHHHHHHHhCc
Confidence                     1126789999999999743

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.71  E-value=3.8e-17  Score=138.81  Aligned_cols=184  Identities=13%  Similarity=0.064  Sum_probs=130.9

Q ss_pred             CcccCCChhHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR--KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||++++++|+++  |++|++++|+.+..+.+.    .    .++.++.+|++|.+++.++++       ++|
T Consensus         4 lVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~d~~~l~~~~~-------~~d   68 (287)
T 2jl1_A            4 AVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D----QGVEVRHGDYNQPESLQKAFA-------GVS   68 (287)
T ss_dssp             EETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H----TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h----cCCeEEEeccCCHHHHHHHHh-------cCC
Confidence            69999999999999999999  999999999876544322    1    247889999999988877654       589


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+|+...       +   .  ++|+.++.++++++..    .+     -.+||++||.....               
T Consensus        69 ~vi~~a~~~~-------~---~--~~n~~~~~~l~~a~~~----~~-----~~~~v~~Ss~~~~~---------------  112 (287)
T 2jl1_A           69 KLLFISGPHY-------D---N--TLLIVQHANVVKAARD----AG-----VKHIAYTGYAFAEE---------------  112 (287)
T ss_dssp             EEEECCCCCS-------C---H--HHHHHHHHHHHHHHHH----TT-----CSEEEEEEETTGGG---------------
T ss_pred             EEEEcCCCCc-------C---c--hHHHHHHHHHHHHHHH----cC-----CCEEEEECCCCCCC---------------
Confidence            9999998521       1   1  5788888888777643    22     35999999976531               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHH--H------HhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF--F------SFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~--~------~~~~~~~~~~~  230 (288)
                         ....|+.+|.+.+.+++.       .+  ++++.+.||++.++.....  .......  .      ....+..++|+
T Consensus       113 ---~~~~y~~~K~~~E~~~~~-------~~--~~~~ilrp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dv  178 (287)
T 2jl1_A          113 ---SIIPLAHVHLATEYAIRT-------TN--IPYTFLRNALYTDFFVNEG--LRASTESGAIVTNAGSGIVNSVTRNEL  178 (287)
T ss_dssp             ---CCSTHHHHHHHHHHHHHH-------TT--CCEEEEEECCBHHHHSSGG--GHHHHHHTEEEESCTTCCBCCBCHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHH-------cC--CCeEEEECCEeccccchhh--HHHHhhCCceeccCCCCccCccCHHHH
Confidence               123799999998887752       45  8899999999877642221  1111111  0      11234578999


Q ss_pred             HHHHHHHhcCCCccCCCceeec
Q 023054          231 AATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      |+.+++++..+.   .+|+.|.
T Consensus       179 a~~~~~~~~~~~---~~g~~~~  197 (287)
T 2jl1_A          179 ALAAATVLTEEG---HENKTYN  197 (287)
T ss_dssp             HHHHHHHHTSSS---CTTEEEE
T ss_pred             HHHHHHHhcCCC---CCCcEEE
Confidence            999999996332   3566554

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.70  E-value=8.5e-17  Score=138.18  Aligned_cols=197  Identities=14%  Similarity=0.049  Sum_probs=133.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||++++++|+++|+      +.             ......+.++.+|++|.+++.++++..     ++|+|
T Consensus        10 lVtGatG~iG~~l~~~L~~~g~------~~-------------~~~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~V   65 (319)
T 4b8w_A           10 LVTGGSGLVGKAIQKVVADGAG------LP-------------GEDWVFVSSKDADLTDTAQTRALFEKV-----QPTHV   65 (319)
T ss_dssp             EEETCSSHHHHHHHHHHHTTTC------CT-------------TCEEEECCTTTCCTTSHHHHHHHHHHS-----CCSEE
T ss_pred             EEECCCcHHHHHHHHHHHhcCC------cc-------------cccccccCceecccCCHHHHHHHHhhc-----CCCEE
Confidence            6999999999999999999998      10             000122444578999999998888753     69999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC---
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR---  157 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~---  157 (288)
                      ||+|+..... ..+.++....+++|+.++..+++++...    +     -.++|++||...+.. ..   ..++++.   
T Consensus        66 ih~A~~~~~~-~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~-----~~~~v~~SS~~vyg~-~~---~~~~~E~~~~  131 (319)
T 4b8w_A           66 IHLAAMVGGL-FRNIKYNLDFWRKNVHMNDNVLHSAFEV----G-----ARKVVSCLSTCIFPD-KT---TYPIDETMIH  131 (319)
T ss_dssp             EECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-----CSEEEEECCGGGSCS-SC---CSSBCGGGGG
T ss_pred             EECceecccc-cccccCHHHHHHHHHHHHHHHHHHHHHc----C-----CCeEEEEcchhhcCC-CC---CCCccccccc
Confidence            9999985321 1234567789999999999999887442    1     358999999865422 11   1122222   


Q ss_pred             --CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHH----HHh------
Q 023054          158 --AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKF----FSF------  221 (288)
Q Consensus       158 --~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~----~~~------  221 (288)
                        ...+....|+.+|.+.+.+++.++++.   +  ++++.+.|+.+-.+.....    .....+...    ...      
T Consensus       132 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (319)
T 4b8w_A          132 NGPPHNSNFGYSYAKRMIDVQNRAYFQQY---G--CTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTV  206 (319)
T ss_dssp             BSCCCSSSHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEE
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHhh---C--CCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEE
Confidence              122223369999999999999888775   4  8899999999987754321    112222222    111      


Q ss_pred             -------hhcCChHHHHHHHHHHhcC
Q 023054          222 -------FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 -------~~~~~~~~~a~~~~~l~~~  240 (288)
                             ..+...+|+|+.++.++..
T Consensus       207 ~~~g~~~~~~i~v~Dva~a~~~~~~~  232 (319)
T 4b8w_A          207 WGTGNPRRQFIYSLDLAQLFIWVLRE  232 (319)
T ss_dssp             ESCSCCEECEEEHHHHHHHHHHHHHH
T ss_pred             eCCCCeeEEEEeHHHHHHHHHHHHhc
Confidence                   1113678999999999963

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.69  E-value=5.7e-17  Score=137.58  Aligned_cols=181  Identities=14%  Similarity=0.118  Sum_probs=123.1

Q ss_pred             CcccCCChhHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR--KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||+++++.|+++  |++|++++|+++..+.+.    .    ..+.++.+|++|.+++.++++       ++|
T Consensus         3 lVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~~~~~~~~-------~~d   67 (286)
T 2zcu_A            3 AITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A----QGITVRQADYGDEAALTSALQ-------GVE   67 (286)
T ss_dssp             EEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H----TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c----CCCeEEEcCCCCHHHHHHHHh-------CCC
Confidence            69999999999999999998  999999999876544322    1    247889999999988877654       689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +|||+|+...              ..|+.++..+++++    .+.+     -++||++||....                
T Consensus        68 ~vi~~a~~~~--------------~~~~~~~~~l~~a~----~~~~-----~~~~v~~Ss~~~~----------------  108 (286)
T 2zcu_A           68 KLLLISSSEV--------------GQRAPQHRNVINAA----KAAG-----VKFIAYTSLLHAD----------------  108 (286)
T ss_dssp             EEEECC----------------------CHHHHHHHHH----HHHT-----CCEEEEEEETTTT----------------
T ss_pred             EEEEeCCCCc--------------hHHHHHHHHHHHHH----HHcC-----CCEEEEECCCCCC----------------
Confidence            9999998521              12555655555555    3332     3699999997643                


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHH--H------HhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKF--F------SFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~--~------~~~~~~~~~~~  230 (288)
                        .....|+.+|.+.+.+++.       .+  ++++.+.||++.+++...   .......  +      ....+..++|+
T Consensus       109 --~~~~~y~~sK~~~e~~~~~-------~~--~~~~ilrp~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~Dv  174 (286)
T 2zcu_A          109 --TSPLGLADEHIETEKMLAD-------SG--IVYTLLRNGWYSENYLAS---APAALEHGVFIGAAGDGKIASATRADY  174 (286)
T ss_dssp             --TCCSTTHHHHHHHHHHHHH-------HC--SEEEEEEECCBHHHHHTT---HHHHHHHTEEEESCTTCCBCCBCHHHH
T ss_pred             --CCcchhHHHHHHHHHHHHH-------cC--CCeEEEeChHHhhhhHHH---hHHhhcCCceeccCCCCccccccHHHH
Confidence              1124799999998887753       35  999999999987654221   1111111  0      11234578999


Q ss_pred             HHHHHHHhcCCCccCCCceeec
Q 023054          231 AATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      |+.+++++.++.   .+|+.|.
T Consensus       175 a~~~~~~~~~~~---~~g~~~~  193 (286)
T 2zcu_A          175 AAAAARVISEAG---HEGKVYE  193 (286)
T ss_dssp             HHHHHHHHHSSS---CTTCEEE
T ss_pred             HHHHHHHhcCCC---CCCceEE
Confidence            999999997432   2565554

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.66  E-value=2.6e-17  Score=139.95  Aligned_cols=188  Identities=16%  Similarity=0.052  Sum_probs=130.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||| +|+||+++++.|+++|++|++++|+.+..            ..++.++.+|++|.+++.++++      +++|+|
T Consensus         7 lVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------~~~d~v   67 (286)
T 3gpi_A            7 LIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH------LRPEIL   67 (286)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG------GCCSEE
T ss_pred             EEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc------CCCCEE
Confidence            6899 59999999999999999999999986541            3568899999999988777654      269999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+...       .+.+..+++|+.++..+++++..    .+     ..++|++||...+...    ...++++....
T Consensus        68 ih~a~~~~-------~~~~~~~~~n~~~~~~ll~a~~~----~~-----~~~~v~~SS~~vyg~~----~~~~~~E~~~~  127 (286)
T 3gpi_A           68 VYCVAASE-------YSDEHYRLSYVEGLRNTLSALEG----AP-----LQHVFFVSSTGVYGQE----VEEWLDEDTPP  127 (286)
T ss_dssp             EECHHHHH-------HC-----CCSHHHHHHHHHHTTT----SC-----CCEEEEEEEGGGCCCC----CSSEECTTSCC
T ss_pred             EEeCCCCC-------CCHHHHHHHHHHHHHHHHHHHhh----CC-----CCEEEEEcccEEEcCC----CCCCCCCCCCC
Confidence            99998632       34567888999999999888852    21     3689999998654321    11233444455


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHH------HhhhcCChHHHHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF------SFFLWKNVPQGAATT  234 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~~  234 (288)
                      .+...|+.+|.+.+.+ +..          ++++.+.||.+.++....  +...+.+..      ....+...+|+|+.+
T Consensus       128 ~p~~~Y~~sK~~~E~~-~~~----------~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  194 (286)
T 3gpi_A          128 IAKDFSGKRMLEAEAL-LAA----------YSSTILRFSGIYGPGRLR--MIRQAQTPEQWPARNAWTNRIHRDDGAAFI  194 (286)
T ss_dssp             CCCSHHHHHHHHHHHH-GGG----------SSEEEEEECEEEBTTBCH--HHHHTTCGGGSCSSBCEECEEEHHHHHHHH
T ss_pred             CCCChhhHHHHHHHHH-Hhc----------CCeEEEecccccCCCchh--HHHHHHhcccCCCcCceeEEEEHHHHHHHH
Confidence            5678899999998876 432          557789999998775431  122211100      011123578999999


Q ss_pred             HHHhcC
Q 023054          235 CYVALH  240 (288)
Q Consensus       235 ~~l~~~  240 (288)
                      ++++..
T Consensus       195 ~~~~~~  200 (286)
T 3gpi_A          195 AYLIQQ  200 (286)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            999974

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.64  E-value=9.5e-16  Score=130.13  Aligned_cols=191  Identities=13%  Similarity=0.011  Sum_probs=126.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||||| |+||+++++.|+++|++|++++|+.........        ..+.++.+|++|.+            ..++|+|
T Consensus         9 lVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~------------~~~~d~v   67 (286)
T 3ius_A            9 LSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS------------LDGVTHL   67 (286)
T ss_dssp             EEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC------------CTTCCEE
T ss_pred             EEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc------------cCCCCEE
Confidence            69998 999999999999999999999999876554332        35899999999943            3479999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHH--hhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR--TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ||+|+.....     +.              ..+.++..+.+  .+     -.++|++||...+.. .   ....+++..
T Consensus        68 i~~a~~~~~~-----~~--------------~~~~l~~a~~~~~~~-----~~~~v~~Ss~~vyg~-~---~~~~~~E~~  119 (286)
T 3ius_A           68 LISTAPDSGG-----DP--------------VLAALGDQIAARAAQ-----FRWVGYLSTTAVYGD-H---DGAWVDETT  119 (286)
T ss_dssp             EECCCCBTTB-----CH--------------HHHHHHHHHHHTGGG-----CSEEEEEEEGGGGCC-C---TTCEECTTS
T ss_pred             EECCCccccc-----cH--------------HHHHHHHHHHhhcCC-----ceEEEEeecceecCC-C---CCCCcCCCC
Confidence            9999965321     10              12344444444  22     368999999764422 1   112334444


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHH-----HHHHHHhhhcCChHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR-----FLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~  233 (288)
                      ...+...|+.+|.+.+.+++.+      .+  ++++++.||.+.++..........     ....-....+...+|+|+.
T Consensus       120 ~~~p~~~Y~~sK~~~E~~~~~~------~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  191 (286)
T 3ius_A          120 PLTPTAARGRWRVMAEQQWQAV------PN--LPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQV  191 (286)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHS------TT--CCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHhh------cC--CCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHH
Confidence            5566678999999988887765      45  889999999997764322100000     0000011223466899999


Q ss_pred             HHHHhcCCCccCCCceeec
Q 023054          234 TCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~  252 (288)
                      +++++..+.    .|..|+
T Consensus       192 ~~~~~~~~~----~g~~~~  206 (286)
T 3ius_A          192 LAASMARPD----PGAVYN  206 (286)
T ss_dssp             HHHHHHSCC----TTCEEE
T ss_pred             HHHHHhCCC----CCCEEE
Confidence            999997433    454444

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.63  E-value=5.4e-15  Score=125.65  Aligned_cols=176  Identities=15%  Similarity=0.164  Sum_probs=117.1

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||||+||+++++.|.++ |++|++++|+.++....    .    ...+.++.+|++|.+++.++++       ++|+
T Consensus         4 lVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~----~~~v~~~~~D~~d~~~l~~~~~-------~~d~   68 (289)
T 3e48_A            4 MLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----W----RGKVSVRQLDYFNQESMVEAFK-------GMDT   68 (289)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----G----BTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             EEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----h----hCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence            69999999999999999998 99999999998754321    1    3468999999999988877664       7899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ||||||.....            ..|+.++    +.+++.+.+.+     -++||++||.....                
T Consensus        69 vi~~a~~~~~~------------~~~~~~~----~~l~~aa~~~g-----v~~iv~~Ss~~~~~----------------  111 (289)
T 3e48_A           69 VVFIPSIIHPS------------FKRIPEV----ENLVYAAKQSG-----VAHIIFIGYYADQH----------------  111 (289)
T ss_dssp             EEECCCCCCSH------------HHHHHHH----HHHHHHHHHTT-----CCEEEEEEESCCST----------------
T ss_pred             EEEeCCCCccc------------hhhHHHH----HHHHHHHHHcC-----CCEEEEEcccCCCC----------------
Confidence            99999864321            1244444    44455555543     36899999954221                


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHH----Hh----hhcCChHHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF----SF----FLWKNVPQGA  231 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~----~~----~~~~~~~~~a  231 (288)
                         ...|..++..     ..+...+...+  ++++.+.||++.+++..   +.......-    +.    ..+.+++|+|
T Consensus       112 ---~~~~~~~~~~-----~~~e~~~~~~g--~~~~ilrp~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~~~Dva  178 (289)
T 3e48_A          112 ---NNPFHMSPYF-----GYASRLLSTSG--IDYTYVRMAMYMDPLKP---YLPELMNMHKLIYPAGDGRINYITRNDIA  178 (289)
T ss_dssp             ---TCCSTTHHHH-----HHHHHHHHHHC--CEEEEEEECEESTTHHH---HHHHHHHHTEECCCCTTCEEEEECHHHHH
T ss_pred             ---CCCCccchhH-----HHHHHHHHHcC--CCEEEEeccccccccHH---HHHHHHHCCCEecCCCCceeeeEEHHHHH
Confidence               1223333322     12333444567  99999999999887432   111111110    11    1145789999


Q ss_pred             HHHHHHhcCC
Q 023054          232 ATTCYVALHP  241 (288)
Q Consensus       232 ~~~~~l~~~~  241 (288)
                      +.+++++.++
T Consensus       179 ~~~~~~l~~~  188 (289)
T 3e48_A          179 RGVIAIIKNP  188 (289)
T ss_dssp             HHHHHHHHCG
T ss_pred             HHHHHHHcCC
Confidence            9999999743

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.60  E-value=7.4e-15  Score=129.25  Aligned_cols=169  Identities=15%  Similarity=0.085  Sum_probs=125.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++|+ +|+.++|+                           +|.+++.++++       ++|+
T Consensus         4 lVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~~d~   49 (369)
T 3st7_A            4 VITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------KADF   49 (369)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------HCSE
T ss_pred             EEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------cCCE
Confidence            6999999999999999999998 77776664                           67777777776       4899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||+||...+      ++....+++|+.++..+++++..    .+    ...++|++||.....                
T Consensus        50 Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~~----~~----~~~~~v~~Ss~~~~~----------------   99 (369)
T 3st7_A           50 IVHLAGVNRP------EHDKEFSLGNVSYLDHVLDILTR----NT----KKPAILLSSSIQATQ----------------   99 (369)
T ss_dssp             EEECCCSBCT------TCSTTCSSSCCBHHHHHHHHHTT----CS----SCCEEEEEEEGGGGS----------------
T ss_pred             EEECCcCCCC------CCHHHHHHHHHHHHHHHHHHHHH----hC----CCCeEEEeCchhhcC----------------
Confidence            9999997642      35677888999999998887742    11    024899999987541                


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHHHHHHHHHhh------------hcC
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVMRFLKFFSFF------------LWK  225 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~------------~~~  225 (288)
                         ...|+.+|.+.+.+++.++++.   +  +++..+.|+.+..+.....  .....+.......            .+.
T Consensus       100 ---~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  171 (369)
T 3st7_A          100 ---DNPYGESKLQGEQLLREYAEEY---G--NTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLN  171 (369)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEE
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHh---C--CCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEE
Confidence               4689999999999999988875   4  7788899999977654321  1233333322211            123


Q ss_pred             ChHHHHHHHHHHhcCC
Q 023054          226 NVPQGAATTCYVALHP  241 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~  241 (288)
                      .++|+|+.++.++..+
T Consensus       172 ~v~Dva~~~~~~l~~~  187 (369)
T 3st7_A          172 YVDDIVAEIKRAIEGT  187 (369)
T ss_dssp             EHHHHHHHHHHHHHTC
T ss_pred             EHHHHHHHHHHHHhCC
Confidence            4789999999999743

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.60  E-value=6.4e-15  Score=128.52  Aligned_cols=185  Identities=12%  Similarity=0.007  Sum_probs=124.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh----HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM----AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||||+||+++++.|+++|++|++++|+.    ++.+. ...+.    ..++.++.+|++|.+++.+++++.     +
T Consensus        14 lVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~-----~   83 (346)
T 3i6i_A           14 LIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALE----DKGAIIVYGLINEQEAMEKILKEH-----E   83 (346)
T ss_dssp             EEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHH----HTTCEEEECCTTCHHHHHHHHHHT-----T
T ss_pred             EEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHH----hCCcEEEEeecCCHHHHHHHHhhC-----C
Confidence            6999999999999999999999999999976    33332 22232    246899999999999998888753     7


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +|+|||+++..                 |+.++..+++++...-   .     -.++|. | ..+..          .++
T Consensus        84 ~d~Vi~~a~~~-----------------n~~~~~~l~~aa~~~g---~-----v~~~v~-S-~~g~~----------~~e  126 (346)
T 3i6i_A           84 IDIVVSTVGGE-----------------SILDQIALVKAMKAVG---T-----IKRFLP-S-EFGHD----------VNR  126 (346)
T ss_dssp             CCEEEECCCGG-----------------GGGGHHHHHHHHHHHC---C-----CSEEEC-S-CCSSC----------TTT
T ss_pred             CCEEEECCchh-----------------hHHHHHHHHHHHHHcC---C-----ceEEee-c-ccCCC----------CCc
Confidence            99999999862                 7777777777764321   0     125553 3 32211          112


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHH---HHH-------HHhhhcCC
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF---LKF-------FSFFLWKN  226 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~---~~~-------~~~~~~~~  226 (288)
                      .....+...|+.+|.+++.+.+.       .+  +.+..+.||++..............   ...       -....+..
T Consensus       127 ~~~~~p~~~y~~sK~~~e~~l~~-------~g--~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  197 (346)
T 3i6i_A          127 ADPVEPGLNMYREKRRVRQLVEE-------SG--IPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVA  197 (346)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHHHH-------TT--CCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEEC
T ss_pred             cCcCCCcchHHHHHHHHHHHHHH-------cC--CCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecC
Confidence            22345667899999998877654       45  8889999999877654332110000   000       00223457


Q ss_pred             hHHHHHHHHHHhcCC
Q 023054          227 VPQGAATTCYVALHP  241 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~  241 (288)
                      ++|+|+.++.++.++
T Consensus       198 ~~Dva~~~~~~l~~~  212 (346)
T 3i6i_A          198 GTDIGKFTMKTVDDV  212 (346)
T ss_dssp             HHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHHHHHhCc
Confidence            899999999999643

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.58  E-value=9.2e-15  Score=124.89  Aligned_cols=186  Identities=13%  Similarity=-0.059  Sum_probs=122.3

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|+||++++++|+++| ++|++++|+++....  ..+..    ..+.++.+|++|.+++.++++       ++|+
T Consensus         9 lVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~~~l~~~~~-------~~d~   75 (299)
T 2wm3_A            9 VVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQVIMELALN-------GAYA   75 (299)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             EEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCHHHHHHHHh-------cCCE
Confidence            699999999999999999999 999999998765321  22222    247889999999998887765       5899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ||||++.....          ....|+.+    ++.+++.+.+.+     -++||++|+.. ......            
T Consensus        76 vi~~a~~~~~~----------~~~~~~~~----~~~~~~aa~~~g-----v~~iv~~S~~~-~~~~~~------------  123 (299)
T 2wm3_A           76 TFIVTNYWESC----------SQEQEVKQ----GKLLADLARRLG-----LHYVVYSGLEN-IKKLTA------------  123 (299)
T ss_dssp             EEECCCHHHHT----------CHHHHHHH----HHHHHHHHHHHT-----CSEEEECCCCC-HHHHTT------------
T ss_pred             EEEeCCCCccc----------cchHHHHH----HHHHHHHHHHcC-----CCEEEEEcCcc-ccccCC------------
Confidence            99999853210          12334444    444555555543     46899965543 221100            


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH---HHH------HHHHHHhhhcCChHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV---VMR------FLKFFSFFLWKNVPQG  230 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~---~~~------~~~~~~~~~~~~~~~~  230 (288)
                      ......|+.+|.+++.+.+.       .+  ++++.+.||++.+++......   ...      ....-....+.+++|+
T Consensus       124 ~~~~~~y~~sK~~~e~~~~~-------~g--i~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dv  194 (299)
T 2wm3_A          124 GRLAAAHFDGKGEVEEYFRD-------IG--VPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDL  194 (299)
T ss_dssp             TSCCCHHHHHHHHHHHHHHH-------HT--CCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGH
T ss_pred             CcccCchhhHHHHHHHHHHH-------CC--CCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHH
Confidence            11235799999998887764       35  899999999998765431100   000      0000011234588999


Q ss_pred             HHHHHHHhcC
Q 023054          231 AATTCYVALH  240 (288)
Q Consensus       231 a~~~~~l~~~  240 (288)
                      |+.++.++.+
T Consensus       195 a~~~~~~l~~  204 (299)
T 2wm3_A          195 GPVVLSLLKM  204 (299)
T ss_dssp             HHHHHHHHHS
T ss_pred             HHHHHHHHcC
Confidence            9999999963

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.55  E-value=2e-14  Score=125.75  Aligned_cols=181  Identities=14%  Similarity=0.078  Sum_probs=119.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEec-CCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLD-LSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +||||||+||+++++.|+++|++|++++|+.+...  .+.+..   ..++.++.+| ++|.+++.++++       ++|+
T Consensus         9 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~-------~~d~   76 (352)
T 1xgk_A            9 AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE-------GAHL   76 (352)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT-------TCSE
T ss_pred             EEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh-------cCCE
Confidence            58999999999999999999999999999876542  122222   2358889999 999998887764       5899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc-cccccCCccccCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH-QYTYKGGIRFQKINDRA  158 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~~~~~~~~~~~  158 (288)
                      ||||++...             ...|..+     +.+++.+.+.+.    -++||++||... ...              
T Consensus        77 Vi~~a~~~~-------------~~~~~~~-----~~l~~aa~~~g~----v~~~V~~SS~~~~~~~--------------  120 (352)
T 1xgk_A           77 AFINTTSQA-------------GDEIAIG-----KDLADAAKRAGT----IQHYIYSSMPDHSLYG--------------  120 (352)
T ss_dssp             EEECCCSTT-------------SCHHHHH-----HHHHHHHHHHSC----CSEEEEEECCCGGGTS--------------
T ss_pred             EEEcCCCCC-------------cHHHHHH-----HHHHHHHHHcCC----ccEEEEeCCccccccC--------------
Confidence            999997531             0224333     444444444310    159999999862 221              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hH---HHHHH--H----HHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AV---VMRFL--K----FFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~---~~~~~--~----~~~~~~~~  225 (288)
                       ..+...|+.+|.+.+.+++.+       +  +++++|.||++-+......    ..   .....  .    .-....+.
T Consensus       121 -~~~~~~y~~sK~~~E~~~~~~-------g--i~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i  190 (352)
T 1xgk_A          121 -PWPAVPMWAPKFTVENYVRQL-------G--LPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWL  190 (352)
T ss_dssp             -SCCCCTTTHHHHHHHHHHHTS-------S--SCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEE
T ss_pred             -CCCCccHHHHHHHHHHHHHHc-------C--CCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeE
Confidence             133467999999998887652       5  8889999998754432210    00   00000  0    00111234


Q ss_pred             Ch-HHHHHHHHHHhc
Q 023054          226 NV-PQGAATTCYVAL  239 (288)
Q Consensus       226 ~~-~~~a~~~~~l~~  239 (288)
                      ++ +|+|+.++.++.
T Consensus       191 ~v~~Dva~ai~~~l~  205 (352)
T 1xgk_A          191 DAEHDVGPALLQIFK  205 (352)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             ecHHHHHHHHHHHHh
Confidence            66 899999999996

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.53  E-value=6.5e-14  Score=128.64  Aligned_cols=201  Identities=12%  Similarity=0.109  Sum_probs=130.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||+++++.|+++|++|++++|+....                ..+.+|+.+..         .+...++|+|
T Consensus       151 LVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~~---------~~~l~~~D~V  205 (516)
T 3oh8_A          151 AITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNPA---------SDLLDGADVL  205 (516)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSCC---------TTTTTTCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccchh---------HHhcCCCCEE
Confidence            6999999999999999999999999999986531                12567776431         2234579999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+||..... ..+.+..+..+++|+.++.++++++..   +.+     ..+||++||...+.....   ...+++....
T Consensus       206 ih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~-----~~r~V~~SS~~vyg~~~~---~~~~~E~~~~  273 (516)
T 3oh8_A          206 VHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVAE---STQ-----CTTMISASAVGFYGHDRG---DEILTEESES  273 (516)
T ss_dssp             EECCCC------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSS-----CCEEEEEEEGGGGCSEEE---EEEECTTSCC
T ss_pred             EECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHHh---cCC-----CCEEEEeCcceEecCCCC---CCccCCCCCC
Confidence            9999975432 335566788999999999999997532   211     358999999765431111   1122222222


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh------------hhcCChH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF------------FLWKNVP  228 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------------~~~~~~~  228 (288)
                       +...|+.+|...+.+..    .....|  ++++.+.||.+.++...   ....+...+..            ..+...+
T Consensus       274 -~~~~y~~~~~~~E~~~~----~~~~~g--i~~~ilRp~~v~Gp~~~---~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~  343 (516)
T 3oh8_A          274 -GDDFLAEVCRDWEHATA----PASDAG--KRVAFIRTGVALSGRGG---MLPLLKTLFSTGLGGKFGDGTSWFSWIAID  343 (516)
T ss_dssp             -CSSHHHHHHHHHHHTTH----HHHHTT--CEEEEEEECEEEBTTBS---HHHHHHHTTC---CCCCTTSCCEECEEEHH
T ss_pred             -CcChHHHHHHHHHHHHH----HHHhCC--CCEEEEEeeEEECCCCC---hHHHHHHHHHhCCCcccCCCCceEceEeHH
Confidence             45668888877665433    334456  99999999999887532   12222211110            1234678


Q ss_pred             HHHHHHHHHhcCCCccCCCceee
Q 023054          229 QGAATTCYVALHPNLKGVTGKYF  251 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~  251 (288)
                      |+|+.+++++.++.   ..|.|.
T Consensus       344 Dva~ai~~~l~~~~---~~g~~n  363 (516)
T 3oh8_A          344 DLTDIYYRAIVDAQ---ISGPIN  363 (516)
T ss_dssp             HHHHHHHHHHHCTT---CCEEEE
T ss_pred             HHHHHHHHHHhCcc---cCCcEE
Confidence            99999999997433   345543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.52  E-value=5.7e-14  Score=123.09  Aligned_cols=170  Identities=12%  Similarity=0.012  Sum_probs=112.7

Q ss_pred             CcccCCChhHHHHHHHHHHCC-----CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRK-----AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||+|+||++++++|+++|     ++|++++|+.....       .  ...++.++.+|++|.+++.++++..    .
T Consensus         5 lVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~--~~~~~~~~~~Dl~d~~~~~~~~~~~----~   71 (364)
T 2v6g_A            5 LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------H--EDNPINYVQCDISDPDDSQAKLSPL----T   71 (364)
T ss_dssp             EEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------C--CSSCCEEEECCTTSHHHHHHHHTTC----T
T ss_pred             EEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------c--ccCceEEEEeecCCHHHHHHHHhcC----C
Confidence            699999999999999999999     99999999865422       0  1346889999999998887766532    2


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEE-------EEcCccccccccCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIV-------NLSSIAHQYTYKGG  148 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv-------~vsS~~~~~~~~~~  148 (288)
                      ++|+|||+||...       ++.+..+++|+.++..+++++.+....       -.++|       ++||...+..... 
T Consensus        72 ~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~~-------~~~~v~~~g~~i~~Ss~~vyg~~~~-  136 (364)
T 2v6g_A           72 DVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPNCPN-------LKHISLQTGRKHYMGPFESYGKIES-  136 (364)
T ss_dssp             TCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTTCTT-------CCEEEEECCTHHHHCCGGGTTTSCC-
T ss_pred             CCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHhccc-------cceEEeccCceEEEechhhcccccc-
Confidence            4999999999652       356889999999999999988654211       23666       6777654321100 


Q ss_pred             ccccCCCCCCCC-CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCC
Q 023054          149 IRFQKINDRAGY-SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFK  207 (288)
Q Consensus       149 ~~~~~~~~~~~~-~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~  207 (288)
                       ...++++.... +....|.    +.+.+++.++.+.+  +  +++..+.|+.+-.+...
T Consensus       137 -~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~~~~--~--~~~~ilRp~~v~G~~~~  187 (364)
T 2v6g_A          137 -HDPPYTEDLPRLKYMNFYY----DLEDIMLEEVEKKE--G--LTWSVHRPGNIFGFSPY  187 (364)
T ss_dssp             -CCSSBCTTSCCCSSCCHHH----HHHHHHHHHHTTST--T--CEEEEEEESSEECCCTT
T ss_pred             -CCCCCCccccCCccchhhH----HHHHHHHHHhhcCC--C--ceEEEECCCceeCCCCC
Confidence             01122222211 2234562    33444443332211  3  88999999999876543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.49  E-value=2.2e-13  Score=116.57  Aligned_cols=182  Identities=11%  Similarity=0.043  Sum_probs=116.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-------AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      +||||||+||+++++.|+++|++|++++|+.       ++.+.+ ..+..    ..+.++.+|++|.+++.++++     
T Consensus         6 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~----~~v~~v~~D~~d~~~l~~~~~-----   75 (307)
T 2gas_A            6 LILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS----LGVILLEGDINDHETLVKAIK-----   75 (307)
T ss_dssp             EEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH----TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             EEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh----CCCEEEEeCCCCHHHHHHHHh-----
Confidence            6999999999999999999999999999986       444332 23322    347889999999988877765     


Q ss_pred             CCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           74 NLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                        ++|+|||++|...                 +.+...++++    +.+.+.    -.++|  .|..+...  .      
T Consensus        76 --~~d~vi~~a~~~~-----------------~~~~~~l~~a----a~~~g~----v~~~v--~S~~g~~~--~------  118 (307)
T 2gas_A           76 --QVDIVICAAGRLL-----------------IEDQVKIIKA----IKEAGN----VKKFF--PSEFGLDV--D------  118 (307)
T ss_dssp             --TCSEEEECSSSSC-----------------GGGHHHHHHH----HHHHCC----CSEEE--CSCCSSCT--T------
T ss_pred             --CCCEEEECCcccc-----------------cccHHHHHHH----HHhcCC----ceEEe--ecccccCc--c------
Confidence              6899999999642                 2233444444    333210    13665  34333210  0      


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH------H-HH--H-HHHHhhh
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV------M-RF--L-KFFSFFL  223 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~------~-~~--~-~~~~~~~  223 (288)
                       +.....+....| .+|.+++.+.+.       .+  ++++.+.||++.+++.......      . ..  . .......
T Consensus       119 -~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (307)
T 2gas_A          119 -RHDAVEPVRQVF-EEKASIRRVIEA-------EG--VPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGA  187 (307)
T ss_dssp             -SCCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEE
T ss_pred             -cccCCCcchhHH-HHHHHHHHHHHH-------cC--CCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceE
Confidence             001123335678 999998876652       35  8888899999987654321000      0 00  0 0001123


Q ss_pred             cCChHHHHHHHHHHhcC
Q 023054          224 WKNVPQGAATTCYVALH  240 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~  240 (288)
                      +.+++|+|+.++.++.+
T Consensus       188 ~i~~~Dva~~~~~~l~~  204 (307)
T 2gas_A          188 YVTEADVGTFTIRAAND  204 (307)
T ss_dssp             EECHHHHHHHHHHHHTC
T ss_pred             EeeHHHHHHHHHHHHcC
Confidence            45889999999999963

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.41  E-value=1.1e-12  Score=112.40  Aligned_cols=187  Identities=10%  Similarity=0.022  Sum_probs=115.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-----AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      +||||||+||+++++.|+++|++|++++|+.     ++.+.+ ..+.    ...+.++.+|++|.+++.++++       
T Consensus         8 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~----~~~~~~~~~D~~d~~~l~~~~~-------   75 (313)
T 1qyd_A            8 LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK----QLGAKLIEASLDDHQRLVDALK-------   75 (313)
T ss_dssp             EEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH----TTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             EEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH----hCCeEEEeCCCCCHHHHHHHHh-------
Confidence            5899999999999999999999999999984     333222 2222    2458899999999988887765       


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ++|+|||+++.....             .|+.+...+++++    .+.+.    -.+||+  |..+...  .     .+ 
T Consensus        76 ~~d~vi~~a~~~~~~-------------~~~~~~~~l~~aa----~~~g~----v~~~v~--S~~g~~~--~-----~~-  124 (313)
T 1qyd_A           76 QVDVVISALAGGVLS-------------HHILEQLKLVEAI----KEAGN----IKRFLP--SEFGMDP--D-----IM-  124 (313)
T ss_dssp             TCSEEEECCCCSSSS-------------TTTTTHHHHHHHH----HHSCC----CSEEEC--SCCSSCT--T-----SC-
T ss_pred             CCCEEEECCccccch-------------hhHHHHHHHHHHH----HhcCC----CceEEe--cCCcCCc--c-----cc-
Confidence            589999999975321             1455555555554    33210    136764  4333211  0     00 


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH-------HHHHHHH----HHhhhc
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV-------VMRFLKF----FSFFLW  224 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~-------~~~~~~~----~~~~~~  224 (288)
                      .....+....| .+|.+++.+.+.       .+  ++++.+.||++.+++......       .......    -....+
T Consensus       125 ~~~~~p~~~~y-~sK~~~e~~~~~-------~g--~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  194 (313)
T 1qyd_A          125 EHALQPGSITF-IDKRKVRRAIEA-------AS--IPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIW  194 (313)
T ss_dssp             CCCCSSTTHHH-HHHHHHHHHHHH-------TT--CCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEE
T ss_pred             ccCCCCCcchH-HHHHHHHHHHHh-------cC--CCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEE
Confidence            01112234578 999998876642       35  778888998885432211100       0000000    011234


Q ss_pred             CChHHHHHHHHHHhcC
Q 023054          225 KNVPQGAATTCYVALH  240 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~  240 (288)
                      .+++|+|+.++.++.+
T Consensus       195 i~~~Dva~~~~~~l~~  210 (313)
T 1qyd_A          195 VDEDDVGTYTIKSIDD  210 (313)
T ss_dssp             ECHHHHHHHHHHHTTC
T ss_pred             EEHHHHHHHHHHHHhC
Confidence            5789999999999964

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.39  E-value=1.1e-12  Score=112.95  Aligned_cols=184  Identities=12%  Similarity=0.050  Sum_probs=111.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-----AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      +||||+|+||++++++|+++|++|++++|+.     ....+....+..    ..+.++.+|++|.+++.++++       
T Consensus         8 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~----~~v~~v~~D~~d~~~l~~a~~-------   76 (321)
T 3c1o_A            8 IIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS----MGVTIIEGEMEEHEKMVSVLK-------   76 (321)
T ss_dssp             EEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT-------
T ss_pred             EEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc----CCcEEEEecCCCHHHHHHHHc-------
Confidence            6999999999999999999999999999986     122222222322    358899999999988887765       


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ++|+|||+++...                 +.+...    +++.+.+.+.    -.+||  .|..+...  .     .  
T Consensus        77 ~~d~vi~~a~~~~-----------------~~~~~~----l~~aa~~~g~----v~~~v--~S~~g~~~--~-----~--  120 (321)
T 3c1o_A           77 QVDIVISALPFPM-----------------ISSQIH----IINAIKAAGN----IKRFL--PSDFGCEE--D-----R--  120 (321)
T ss_dssp             TCSEEEECCCGGG-----------------SGGGHH----HHHHHHHHCC----CCEEE--CSCCSSCG--G-----G--
T ss_pred             CCCEEEECCCccc-----------------hhhHHH----HHHHHHHhCC----ccEEe--ccccccCc--c-----c--
Confidence            5899999998642                 223333    3444444310    13666  34333210  0     0  


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh------HHHH----HHHHHHhhhcC
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA------VVMR----FLKFFSFFLWK  225 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~------~~~~----~~~~~~~~~~~  225 (288)
                      .....+....| .+|.+++.+++.       .+  ++++.|.||++.++......      ....    +........+.
T Consensus       121 ~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  190 (321)
T 3c1o_A          121 IKPLPPFESVL-EKKRIIRRAIEA-------AA--LPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLN  190 (321)
T ss_dssp             CCCCHHHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEE
T ss_pred             cccCCCcchHH-HHHHHHHHHHHH-------cC--CCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEe
Confidence            00011224679 999998887752       24  67777889887543211000      0000    00000112345


Q ss_pred             ChHHHHHHHHHHhcCC
Q 023054          226 NVPQGAATTCYVALHP  241 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~  241 (288)
                      +++|+|+.++.++.++
T Consensus       191 ~~~Dva~~~~~~l~~~  206 (321)
T 3c1o_A          191 YEEDIAKYTIKVACDP  206 (321)
T ss_dssp             CHHHHHHHHHHHHHCG
T ss_pred             eHHHHHHHHHHHHhCc
Confidence            8899999999999743

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.34  E-value=9.6e-12  Score=106.38  Aligned_cols=182  Identities=13%  Similarity=0.077  Sum_probs=111.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH------HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA------AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      +||||||+||+++++.|+++|++|++++|+..      +.+ ....+.    ...+.++.+|++|.+++.++++      
T Consensus         8 lVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~~~l~----~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            8 LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQ-LLESFK----ASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             EEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHH-HHHHHH----TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             EEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHH-HHHHHH----hCCCEEEEeccCCHHHHHHHHc------
Confidence            58999999999999999999999999999742      222 122222    2458899999999998887775      


Q ss_pred             CCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           75 LPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                       ++|+|||+++...                 +.+...++    +.+.+.+.    -.+||.  |..+...  .       
T Consensus        77 -~~d~vi~~a~~~~-----------------~~~~~~l~----~aa~~~g~----v~~~v~--S~~g~~~--~-------  119 (308)
T 1qyc_A           77 -NVDVVISTVGSLQ-----------------IESQVNII----KAIKEVGT----VKRFFP--SEFGNDV--D-------  119 (308)
T ss_dssp             -TCSEEEECCCGGG-----------------SGGGHHHH----HHHHHHCC----CSEEEC--SCCSSCT--T-------
T ss_pred             -CCCEEEECCcchh-----------------hhhHHHHH----HHHHhcCC----CceEee--cccccCc--c-------
Confidence             5899999998632                 22233333    33433310    136663  3332110  0       


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHH------H-HH---HHHHHhhhc
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVV------M-RF---LKFFSFFLW  224 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~------~-~~---~~~~~~~~~  224 (288)
                      +.....+....| .+|.+++.+.+.       .+  ++++.+.||++.+.+.......      . ..   ...-....+
T Consensus       120 ~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (308)
T 1qyc_A          120 NVHAVEPAKSVF-EVKAKVRRAIEA-------EG--IPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVF  189 (308)
T ss_dssp             SCCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEE
T ss_pred             ccccCCcchhHH-HHHHHHHHHHHh-------cC--CCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEE
Confidence            001112335678 999998877653       34  7777889988754322111000      0 00   000011233


Q ss_pred             CChHHHHHHHHHHhcC
Q 023054          225 KNVPQGAATTCYVALH  240 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~  240 (288)
                      .+++|+|+.++.++.+
T Consensus       190 i~~~Dva~~~~~~l~~  205 (308)
T 1qyc_A          190 VKEEDIGTFTIKAVDD  205 (308)
T ss_dssp             ECHHHHHHHHHTTSSC
T ss_pred             ecHHHHHHHHHHHHhC
Confidence            5779999999999963

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.32  E-value=4.1e-12  Score=109.30  Aligned_cols=183  Identities=11%  Similarity=0.009  Sum_probs=110.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|+||+++++.|+++|++|++++|+.....+....+..    ..+.++.+|++|.+++.++++       ++|+|
T Consensus        15 lVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~~~l~~a~~-------~~d~v   83 (318)
T 2r6j_A           15 LIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEHEKLVELMK-------KVDVV   83 (318)
T ss_dssp             EEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            5899999999999999999999999999987422222222322    347889999999998887765       58999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+++...                 +.+.    +.+++.+.+.+.    -.+||+  |..+...  .     .  .....
T Consensus        84 i~~a~~~~-----------------~~~~----~~l~~aa~~~g~----v~~~v~--S~~g~~~--~-----~--~~~~~  127 (318)
T 2r6j_A           84 ISALAFPQ-----------------ILDQ----FKILEAIKVAGN----IKRFLP--SDFGVEE--D-----R--INALP  127 (318)
T ss_dssp             EECCCGGG-----------------STTH----HHHHHHHHHHCC----CCEEEC--SCCSSCT--T-----T--CCCCH
T ss_pred             EECCchhh-----------------hHHH----HHHHHHHHhcCC----CCEEEe--eccccCc--c-----c--ccCCC
Confidence            99998641                 2223    333444444310    136663  3332110  0     0  00011


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------hHHHHHHHHHHhhhcCChHHHHHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------AVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                      +....| .+|.+++.+.+.       .+  +.++.+.||++...+....       ..............+.+++|+|+.
T Consensus       128 p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  197 (318)
T 2r6j_A          128 PFEALI-ERKRMIRRAIEE-------AN--IPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLY  197 (318)
T ss_dssp             HHHHHH-HHHHHHHHHHHH-------TT--CCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHH
T ss_pred             CcchhH-HHHHHHHHHHHh-------cC--CCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHH
Confidence            224568 999998877653       35  7777889988754321100       000000000011223478999999


Q ss_pred             HHHHhcC
Q 023054          234 TCYVALH  240 (288)
Q Consensus       234 ~~~l~~~  240 (288)
                      ++.++.+
T Consensus       198 ~~~~l~~  204 (318)
T 2r6j_A          198 TIKVATD  204 (318)
T ss_dssp             HHHHTTC
T ss_pred             HHHHhcC
Confidence            9999963

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.31  E-value=1.1e-11  Score=105.75  Aligned_cols=198  Identities=15%  Similarity=0.122  Sum_probs=114.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||||.||++++++|.++|++|+++.|++..              ..+.   .|     .   +   ..+....+|.+
T Consensus         4 LVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~~---~~-----~---~---~~~~l~~~d~v   55 (298)
T 4b4o_A            4 LVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRIT---WD-----E---L---AASGLPSCDAA   55 (298)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEEE---HH-----H---H---HHHCCCSCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Ceee---cc-----h---h---hHhhccCCCEE
Confidence            699999999999999999999999999997531              1121   11     1   0   11234579999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ||.||....  ....+.......++.|+.++-.+.+++...-.+       ..++|+.||...+..    ......++..
T Consensus        56 ihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~-------~~~~i~~Ss~~vyg~----~~~~~~~E~~  124 (298)
T 4b4o_A           56 VNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQP-------PKAWVLVTGVAYYQP----SLTAEYDEDS  124 (298)
T ss_dssp             EECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSC-------CSEEEEEEEGGGSCC----CSSCCBCTTC
T ss_pred             EEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCC-------ceEEEEEeeeeeecC----CCCCcccccC
Confidence            999985322  122333444567778887777766655322111       234566666554321    1112233333


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh------------hhcCC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF------------FLWKN  226 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------------~~~~~  226 (288)
                      ...+...|+..|...+.     .......+  +++..+.||.+-.+-..   ....+......            ..+..
T Consensus       125 p~~~~~~~~~~~~~~e~-----~~~~~~~~--~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~g~g~~~~~~ih  194 (298)
T 4b4o_A          125 PGGDFDFFSNLVTKWEA-----AARLPGDS--TRQVVVRSGVVLGRGGG---AMGHMLLPFRLGLGGPIGSGHQFFPWIH  194 (298)
T ss_dssp             CCSCSSHHHHHHHHHHH-----HHCCSSSS--SEEEEEEECEEECTTSH---HHHHHHHHHHTTCCCCBTTSCSBCCEEE
T ss_pred             CccccchhHHHHHHHHH-----HHHhhccC--CceeeeeeeeEEcCCCC---chhHHHHHHhcCCcceecccCceeecCc
Confidence            34444445555444332     22234445  89999999999876432   22222222211            11234


Q ss_pred             hHHHHHHHHHHhcCCCccCCCcee
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKY  250 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~  250 (288)
                      .+|+++.+++++.++.   ..|.|
T Consensus       195 v~Dva~a~~~~~~~~~---~~g~y  215 (298)
T 4b4o_A          195 IGDLAGILTHALEANH---VHGVL  215 (298)
T ss_dssp             HHHHHHHHHHHHHCTT---CCEEE
T ss_pred             HHHHHHHHHHHHhCCC---CCCeE
Confidence            6899999999996433   34654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.24  E-value=6.6e-12  Score=106.62  Aligned_cols=100  Identities=19%  Similarity=0.253  Sum_probs=80.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+||||+++++.|+++|++|++++|+.++++++.+++...   ..+.++.+|+++.+++.++++       .+|+|
T Consensus       123 lVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~---~~~~~~~~D~~~~~~~~~~~~-------~~Dvl  192 (287)
T 1lu9_A          123 VVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAVK-------GAHFV  192 (287)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHTT-------TCSEE
T ss_pred             EEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEecCCCHHHHHHHHH-------hCCEE
Confidence            58999999999999999999999999999999888888777543   136678899999988776654       47999


Q ss_pred             EEccccCCC--CC-CCCC-CcchhhhhhhhhHHH
Q 023054           81 INNAGIMFC--PY-QISE-DGIEMQFATNHIGHF  110 (288)
Q Consensus        81 v~~ag~~~~--~~-~~~~-~~~~~~~~~n~~~~~  110 (288)
                      |||+|....  .. +.+. +.++..+++|+.+++
T Consensus       193 Vn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          193 FTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             EECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             EECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            999986422  11 3343 677888999988877

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.17  E-value=2.9e-11  Score=104.58  Aligned_cols=169  Identities=10%  Similarity=-0.024  Sum_probs=109.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKA-------HVIIAARNM--AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFI   71 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (288)
                      +||||+|.||.+++..|+++|.       .|+++++++  +..+.....+...    .+.++ .|+.+..+..+.+    
T Consensus         8 lVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~----~~~~~-~di~~~~~~~~a~----   78 (327)
T 1y7t_A            8 AVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC----AFPLL-AGLEATDDPKVAF----   78 (327)
T ss_dssp             EESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT----TCTTE-EEEEEESCHHHHT----
T ss_pred             EEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc----ccccc-CCeEeccChHHHh----
Confidence            5899999999999999999996       899999875  2333222233221    11122 4666544433332    


Q ss_pred             hcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           72 ALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                         .++|+|||.||.....    .+...+.+++|+.++..+++++..+-  ..     ..+++++|+......+..    
T Consensus        79 ---~~~D~Vih~Ag~~~~~----~~~~~~~~~~Nv~~t~~l~~a~~~~~--~~-----~~~vvv~snp~~~~~~~~----  140 (327)
T 1y7t_A           79 ---KDADYALLVGAAPRKA----GMERRDLLQVNGKIFTEQGRALAEVA--KK-----DVKVLVVGNPANTNALIA----  140 (327)
T ss_dssp             ---TTCSEEEECCCCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHHS--CT-----TCEEEECSSSHHHHHHHH----
T ss_pred             ---CCCCEEEECCCcCCCC----CCCHHHHHHHHHHHHHHHHHHHHhhc--CC-----CeEEEEeCCchhhhHHHH----
Confidence               2689999999976432    23456789999999999998886642  01     358888888653221000    


Q ss_pred             cCCCCCC-CCCccccchhhHHHHHHHHHHHHHHhcccCCceEE-EEeeCC
Q 023054          152 QKINDRA-GYSDKKAYGQSKLANILHANELSRRFQEEGVNITA-NSVHPG  199 (288)
Q Consensus       152 ~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v-~~v~PG  199 (288)
                         .+.. ++++...|+.+|...+.+...+++.++-.-..+|. +.+-|+
T Consensus       141 ---~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h  187 (327)
T 1y7t_A          141 ---YKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNH  187 (327)
T ss_dssp             ---HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCS
T ss_pred             ---HHHcCCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCC
Confidence               0111 35566789999999999888888877644323553 444454

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.79  E-value=3.6e-09  Score=81.42  Aligned_cols=78  Identities=9%  Similarity=0.077  Sum_probs=63.2

Q ss_pred             ChhHHHHHHHHHHCCCEEEEEeCChHHHH---HHHHHHHhhCCCCceEEEEecCCCh--HHHHHHHHHHHhcCCCcceEE
Q 023054            7 SGIGLETARVLALRKAHVIIAARNMAAAN---EARQLILKEDDTARVDTLKLDLSSI--ASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         7 ~gIG~~ia~~La~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~lv   81 (288)
                      +-++.++++.|+++|++|++..|+.....   +..+.+...  +.++..+.+|++++  ++++++++.+.+.+|+ |+||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            45789999999999999999988755432   123344433  56788889999999  9999999999998888 9999


Q ss_pred             EccccC
Q 023054           82 NNAGIM   87 (288)
Q Consensus        82 ~~ag~~   87 (288)
                      ||||+.
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999964

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.71  E-value=4.7e-08  Score=70.85  Aligned_cols=69  Identities=22%  Similarity=0.233  Sum_probs=57.3

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|+|+ |++|+++++.|.++| ++|++++|++++.+...        ...+.++.+|+++.+++.++++       ++|+
T Consensus         9 ~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~-------~~d~   72 (118)
T 3ic5_A            9 CVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALG-------GFDA   72 (118)
T ss_dssp             EEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHc-------CCCE
Confidence            48999 999999999999999 89999999988766543        1346778899999877766553       6899


Q ss_pred             EEEccc
Q 023054           80 LINNAG   85 (288)
Q Consensus        80 lv~~ag   85 (288)
                      ||++++
T Consensus        73 vi~~~~   78 (118)
T 3ic5_A           73 VISAAP   78 (118)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999996

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.70  E-value=7.2e-08  Score=85.57  Aligned_cols=80  Identities=23%  Similarity=0.356  Sum_probs=69.2

Q ss_pred             CcccCCChhHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRK---AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      +|+|| ||||+++++.|+++|   ..|++++|+.++++++.+++...+ +.++.++.+|++|.++++++++..     ++
T Consensus         5 lIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~-----~~   77 (405)
T 4ina_A            5 LQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV-----KP   77 (405)
T ss_dssp             EEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh-----CC
Confidence            58898 899999999999998   489999999999998888876543 246889999999999999998865     68


Q ss_pred             ceEEEccccC
Q 023054           78 NILINNAGIM   87 (288)
Q Consensus        78 d~lv~~ag~~   87 (288)
                      |+||||++..
T Consensus        78 DvVin~ag~~   87 (405)
T 4ina_A           78 QIVLNIALPY   87 (405)
T ss_dssp             SEEEECSCGG
T ss_pred             CEEEECCCcc
Confidence            9999999864

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.69  E-value=1.8e-08  Score=81.55  Aligned_cols=101  Identities=15%  Similarity=0.135  Sum_probs=62.0

Q ss_pred             CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccc
Q 023054            6 ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus         6 s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      |||||+++|+.|+++|++|++++++.. ++         .+ ..+  -.+|+++.++   +++.+.+.++++|++|||||
T Consensus        33 Sg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~-~g~--~~~dv~~~~~---~~~~v~~~~~~~Dili~~Aa   96 (226)
T 1u7z_A           33 SGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TP-PFV--KRVDVMTALE---MEAAVNASVQQQNIFIGCAA   96 (226)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CC-TTE--EEEECCSHHH---HHHHHHHHGGGCSEEEECCB
T ss_pred             ccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cC-CCC--eEEccCcHHH---HHHHHHHhcCCCCEEEECCc
Confidence            689999999999999999999987652 10         01 122  2467777544   55566666788999999999


Q ss_pred             cCCC-CCCCCCCcchhh--hhhhhhHHHHHHHhhHHHHHH
Q 023054           86 IMFC-PYQISEDGIEMQ--FATNHIGHFLLTNLLLDTMNR  122 (288)
Q Consensus        86 ~~~~-~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~~~~  122 (288)
                      +... +.....+.+...  -..++.-.+....-+++.+.+
T Consensus        97 v~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~  136 (226)
T 1u7z_A           97 VADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAA  136 (226)
T ss_dssp             CCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHH
T ss_pred             ccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHh
Confidence            8642 122333334331  122333344444556666654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.53  E-value=3.1e-08  Score=80.31  Aligned_cols=69  Identities=13%  Similarity=0.140  Sum_probs=49.3

Q ss_pred             CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccc
Q 023054            6 ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus         6 s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      ||++|+++|+.|+++|++|++++|+... .       ... ...+.+  .|+.   ++.++++.+.+.++++|++||||+
T Consensus        28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~-------~~~-~~~~~~--~~v~---s~~em~~~v~~~~~~~Dili~aAA   93 (232)
T 2gk4_A           28 TGHLGKIITETLLSAGYEVCLITTKRAL-K-------PEP-HPNLSI--REIT---NTKDLLIEMQERVQDYQVLIHSMA   93 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEECTTSC-C-------CCC-CTTEEE--EECC---SHHHHHHHHHHHGGGCSEEEECSB
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCccc-c-------ccC-CCCeEE--EEHh---HHHHHHHHHHHhcCCCCEEEEcCc
Confidence            7889999999999999999999987531 0       000 122333  3444   556666666666788999999999


Q ss_pred             cCC
Q 023054           86 IMF   88 (288)
Q Consensus        86 ~~~   88 (288)
                      +..
T Consensus        94 vsD   96 (232)
T 2gk4_A           94 VSD   96 (232)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            764

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.35  E-value=1e-06  Score=70.07  Aligned_cols=74  Identities=11%  Similarity=0.173  Sum_probs=53.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||.++++.+...|++|++++|++++.+...    +.  +..   ..+|.++.+..+.+.+...  ..++|++
T Consensus        43 lV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~--g~~---~~~d~~~~~~~~~~~~~~~--~~~~D~v  111 (198)
T 1pqw_A           43 LIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RL--GVE---YVGDSRSVDFADEILELTD--GYGVDVV  111 (198)
T ss_dssp             EETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TT--CCS---EEEETTCSTHHHHHHHHTT--TCCEEEE
T ss_pred             EEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc--CCC---EEeeCCcHHHHHHHHHHhC--CCCCeEE
Confidence            58999999999999999999999999999987665432    22  222   2358877665554443321  2369999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |+|+|
T Consensus       112 i~~~g  116 (198)
T 1pqw_A          112 LNSLA  116 (198)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99997

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.33  E-value=5.9e-07  Score=80.67  Aligned_cols=73  Identities=16%  Similarity=0.207  Sum_probs=57.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+| +|++|+++++.|++.|++|++++|+.++++++.+.+      ..+..+.+|++|.+++.++++       ++|+|
T Consensus         7 lViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~------~~~~~~~~Dv~d~~~l~~~l~-------~~DvV   72 (450)
T 1ff9_A            7 LMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDDAALDAEVA-------KHDLV   72 (450)
T ss_dssp             EEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC------TTEEEEECCTTCHHHHHHHHT-------TSSEE
T ss_pred             EEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc------CCceEEEeecCCHHHHHHHHc-------CCcEE
Confidence            4787 799999999999999999999999987765443221      236788899999888777653       68999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      |||++..
T Consensus        73 In~a~~~   79 (450)
T 1ff9_A           73 ISLIPYT   79 (450)
T ss_dssp             EECCC--
T ss_pred             EECCccc
Confidence            9999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.32  E-value=1e-06  Score=76.02  Aligned_cols=74  Identities=14%  Similarity=0.202  Sum_probs=55.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||.++++.+...|++|+++++++++.+.+ +++     +..   ..+|.++.+++.+.+.++..  +++|++
T Consensus       150 lV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~--~~~d~v  218 (333)
T 1v3u_A          150 LVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLEEALKKASP--DGYDCY  218 (333)
T ss_dssp             EEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHHHHHHHHCT--TCEEEE
T ss_pred             EEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHHHHHHHHhC--CCCeEE
Confidence            6899999999999999999999999999998877655 332     222   23588774445554554433  579999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |+|+|
T Consensus       219 i~~~g  223 (333)
T 1v3u_A          219 FDNVG  223 (333)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.31  E-value=1.1e-06  Score=75.72  Aligned_cols=163  Identities=9%  Similarity=-0.044  Sum_probs=102.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-------EEEEEeCC----hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKA-------HVIIAARN----MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQN   69 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   69 (288)
                      +||||+|.||.+++..|+.+|.       .|++++++    +++++.....+....  ..+.   .|+....+..+.   
T Consensus         9 ~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~~---~~i~~~~~~~~a---   80 (329)
T 1b8p_A            9 AVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPLL---AGMTAHADPMTA---   80 (329)
T ss_dssp             EESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTTE---EEEEEESSHHHH---
T ss_pred             EEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--cccc---CcEEEecCcHHH---
Confidence            4899999999999999999885       79999998    655555444554421  1111   243332232222   


Q ss_pred             HHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc
Q 023054           70 FIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI  149 (288)
Q Consensus        70 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  149 (288)
                          ..+.|+|||.||.....    .....+.+..|+.....+++.+..+-.  .     .++||++|.+......... 
T Consensus        81 ----l~~aD~Vi~~ag~~~~~----g~~r~dl~~~N~~i~~~i~~~i~~~~~--p-----~a~ii~~SNPv~~~t~~~~-  144 (329)
T 1b8p_A           81 ----FKDADVALLVGARPRGP----GMERKDLLEANAQIFTVQGKAIDAVAS--R-----NIKVLVVGNPANTNAYIAM-  144 (329)
T ss_dssp             ----TTTCSEEEECCCCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHHSC--T-----TCEEEECSSSHHHHHHHHH-
T ss_pred             ----hCCCCEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHhcC--C-----CeEEEEccCchHHHHHHHH-
Confidence                23689999999975431    122345677888877777777765420  1     4689999987644321000 


Q ss_pred             cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceE
Q 023054          150 RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNIT  192 (288)
Q Consensus       150 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~  192 (288)
                           ....++++...|+.++.--..+...+++.++-.-..|+
T Consensus       145 -----~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~  182 (329)
T 1b8p_A          145 -----KSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIE  182 (329)
T ss_dssp             -----HTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred             -----HHcCCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHce
Confidence                 00114566667888887667777888888775432354

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.28  E-value=4.3e-07  Score=83.20  Aligned_cols=90  Identities=18%  Similarity=0.125  Sum_probs=62.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh-cCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA-LNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~id~   79 (288)
                      ||||| ||+|++++..|+++|++|++++|+.++++++.+.+     +.++.    ++.+.          .+ ....+|+
T Consensus       368 lV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~----~~~dl----------~~~~~~~~Di  427 (523)
T 2o7s_A          368 VVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKAL----SLTDL----------DNYHPEDGMV  427 (523)
T ss_dssp             EEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CE----ETTTT----------TTC--CCSEE
T ss_pred             EEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCcee----eHHHh----------hhccccCceE
Confidence            58999 59999999999999999999999998888776655     12221    22221          11 1135899


Q ss_pred             EEEccccCCC-------CCCCCCCcchhhhhhhhhHHH
Q 023054           80 LINNAGIMFC-------PYQISEDGIEMQFATNHIGHF  110 (288)
Q Consensus        80 lv~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~  110 (288)
                      ||||+|+...       ..+.+.+.+...+++|+.+..
T Consensus       428 lVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          428 LANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             EEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             EEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            9999997421       122345667889999998753

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.21  E-value=6.4e-07  Score=75.71  Aligned_cols=74  Identities=22%  Similarity=0.240  Sum_probs=54.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|||++ |+|+++++.|+++| +|++++|+.++++++.+++...+. ... .+.+|+++.          .+..+++|+|
T Consensus       132 lV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~-~~~-~~~~d~~~~----------~~~~~~~Dil  197 (287)
T 1nvt_A          132 VIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN-KKF-GEEVKFSGL----------DVDLDGVDII  197 (287)
T ss_dssp             EEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT-CCH-HHHEEEECT----------TCCCTTCCEE
T ss_pred             EEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc-ccc-ceeEEEeeH----------HHhhCCCCEE
Confidence            589987 99999999999999 999999999988888777654310 011 123455542          3445789999


Q ss_pred             EEccccCC
Q 023054           81 INNAGIMF   88 (288)
Q Consensus        81 v~~ag~~~   88 (288)
                      |||+|...
T Consensus       198 Vn~ag~~~  205 (287)
T 1nvt_A          198 INATPIGM  205 (287)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99999754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.21  E-value=1.2e-06  Score=76.63  Aligned_cols=100  Identities=21%  Similarity=0.201  Sum_probs=66.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+ |+||+++++.|...|++|++++|++++++.+.+.+     +..   +.+|.++.+++.+++.       ..|+|
T Consensus       170 ~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~~~l~~~~~-------~~DvV  233 (369)
T 2eez_A          170 VILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATEANIKKSVQ-------HADLL  233 (369)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCHHHHHHHHH-------HCSEE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCHHHHHHHHh-------CCCEE
Confidence            48898 99999999999999999999999998776554332     222   4567788777766653       57999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      |++++.....   +              +..+.+..++.|++       ++.||++++..
T Consensus       234 i~~~g~~~~~---~--------------~~li~~~~l~~mk~-------gg~iV~v~~~~  269 (369)
T 2eez_A          234 IGAVLVPGAK---A--------------PKLVTRDMLSLMKE-------GAVIVDVAVDQ  269 (369)
T ss_dssp             EECCC------------------------CCSCHHHHTTSCT-------TCEEEECC---
T ss_pred             EECCCCCccc---c--------------chhHHHHHHHhhcC-------CCEEEEEecCC
Confidence            9999864210   0              01123444455532       57899999764

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.16  E-value=1.7e-09  Score=96.76  Aligned_cols=38  Identities=26%  Similarity=0.274  Sum_probs=33.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQ   39 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~   39 (288)
                      +|||++ +||+++|+.|+..|++|+++++++.+..+...
T Consensus       269 vVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          269 VVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             EEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            589987 99999999999999999999999877665543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.12  E-value=5.1e-06  Score=74.80  Aligned_cols=72  Identities=17%  Similarity=0.243  Sum_probs=58.4

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|+|+ ||+|++++..|+++ |++|++++|+.++++++.+.       ..+.++.+|+.|.+++.++++       ++|+
T Consensus        27 lIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-------~~~~~~~~D~~d~~~l~~~l~-------~~Dv   91 (467)
T 2axq_A           27 LLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-------SGSKAISLDVTDDSALDKVLA-------DNDV   91 (467)
T ss_dssp             EEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-------GTCEEEECCTTCHHHHHHHHH-------TSSE
T ss_pred             EEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-------cCCcEEEEecCCHHHHHHHHc-------CCCE
Confidence            58897 99999999999998 78999999998877665432       125667899999888776654       6899


Q ss_pred             EEEccccC
Q 023054           80 LINNAGIM   87 (288)
Q Consensus        80 lv~~ag~~   87 (288)
                      |||+++..
T Consensus        92 VIn~tp~~   99 (467)
T 2axq_A           92 VISLIPYT   99 (467)
T ss_dssp             EEECSCGG
T ss_pred             EEECCchh
Confidence            99999864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.09  E-value=1.2e-05  Score=69.33  Aligned_cols=75  Identities=15%  Similarity=0.134  Sum_probs=55.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+||||.++++.+...|++|+++++++++++.+.+ +     +..   ..+|.++.+..+.+.+...  ..++|++
T Consensus       150 lV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~-----g~~---~~~d~~~~~~~~~i~~~~~--~~~~d~v  218 (333)
T 1wly_A          150 LIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L-----GCH---HTINYSTQDFAEVVREITG--GKGVDVV  218 (333)
T ss_dssp             EETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHHT--TCCEEEE
T ss_pred             EEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCHHHHHHHHHHhC--CCCCeEE
Confidence            589999999999999999999999999999877665432 2     222   2357777665555544332  2369999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |+|+|.
T Consensus       219 i~~~g~  224 (333)
T 1wly_A          219 YDSIGK  224 (333)
T ss_dssp             EECSCT
T ss_pred             EECCcH
Confidence            999984

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.08  E-value=2.1e-05  Score=66.93  Aligned_cols=75  Identities=17%  Similarity=0.232  Sum_probs=58.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCC---hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARN---MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      ||+|+ ||+|++++..|++.|+ +|++++|+   .++++++.+++.... +  +.+...++.+.+++.+.+.       .
T Consensus       158 lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~--~~~~~~~~~~~~~l~~~l~-------~  226 (315)
T 3tnl_A          158 TICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-D--CKAQLFDIEDHEQLRKEIA-------E  226 (315)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-S--CEEEEEETTCHHHHHHHHH-------T
T ss_pred             EEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-C--CceEEeccchHHHHHhhhc-------C
Confidence            58897 7999999999999999 89999999   888888888887654 2  3344457777655554433       5


Q ss_pred             cceEEEcccc
Q 023054           77 LNILINNAGI   86 (288)
Q Consensus        77 id~lv~~ag~   86 (288)
                      .|+|||+...
T Consensus       227 aDiIINaTp~  236 (315)
T 3tnl_A          227 SVIFTNATGV  236 (315)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECccC
Confidence            7999998754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.07  E-value=1.5e-05  Score=59.54  Aligned_cols=70  Identities=11%  Similarity=0.148  Sum_probs=54.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+ |.+|.++++.|.++|++|++++++++..+...+    .    .+.++..|.++++.++++      ...+.|++
T Consensus        10 ~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~~~l~~~------~~~~~d~v   74 (141)
T 3llv_A           10 IVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E----GFDAVIADPTDESFYRSL------DLEGVSAV   74 (141)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEECCTTCHHHHHHS------CCTTCSEE
T ss_pred             EEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C----CCcEEECCCCCHHHHHhC------CcccCCEE
Confidence            46777 789999999999999999999999987665443    1    257788999998776543      23468999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |.+.+
T Consensus        75 i~~~~   79 (141)
T 3llv_A           75 LITGS   79 (141)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            98776

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.06  E-value=8.1e-06  Score=70.78  Aligned_cols=75  Identities=15%  Similarity=0.067  Sum_probs=55.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+||||.++++.+...|++|++++|++++.+... ++     +..   ..+|+++.+++.+.+.++...  ++|++
T Consensus       174 lV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~-----g~~---~~~d~~~~~~~~~~~~~~~~~--~~D~v  242 (347)
T 2hcy_A          174 AISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SI-----GGE---VFIDFTKEKDIVGAVLKATDG--GAHGV  242 (347)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HT-----TCC---EEEETTTCSCHHHHHHHHHTS--CEEEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-Hc-----CCc---eEEecCccHhHHHHHHHHhCC--CCCEE
Confidence            68999999999999999999999999999887764332 22     222   234888655666656555433  79999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |+|+|.
T Consensus       243 i~~~g~  248 (347)
T 2hcy_A          243 INVSVS  248 (347)
T ss_dssp             EECSSC
T ss_pred             EECCCc
Confidence            999983

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.05  E-value=6e-06  Score=71.52  Aligned_cols=75  Identities=8%  Similarity=0.129  Sum_probs=54.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+||||.++++.+...|++|+++++++++++.+.+++     +..   ..+|.++.+++.+.+.++..  +++|++
T Consensus       160 lI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~~~~~~~~~~~~--~~~d~v  229 (345)
T 2j3h_A          160 YVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFD---DAFNYKEESDLTAALKRCFP--NGIDIY  229 (345)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCS---EEEETTSCSCSHHHHHHHCT--TCEEEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCc---eEEecCCHHHHHHHHHHHhC--CCCcEE
Confidence            68999999999999999999999999999988766543222     222   22477765444444444432  479999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |+|+|
T Consensus       230 i~~~g  234 (345)
T 2j3h_A          230 FENVG  234 (345)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.04  E-value=1.1e-05  Score=69.26  Aligned_cols=74  Identities=14%  Similarity=0.158  Sum_probs=54.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||.++++.+...|++|+++++++++.+.+.+ +     +..   ..+|.++.+..+.+.+...  ..++|++
T Consensus       145 lV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~---~~~~~~~~~~~~~~~~~~~--~~~~D~v  213 (327)
T 1qor_A          145 LFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAW---QVINYREEDLVERLKEITG--GKKVRVV  213 (327)
T ss_dssp             EESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCS---EEEETTTSCHHHHHHHHTT--TCCEEEE
T ss_pred             EEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC---EEEECCCccHHHHHHHHhC--CCCceEE
Confidence            589999999999999999999999999999877665443 2     222   2357777665555444321  2369999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |+|+|
T Consensus       214 i~~~g  218 (327)
T 1qor_A          214 YDSVG  218 (327)
T ss_dssp             EECSC
T ss_pred             EECCc
Confidence            99998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.04  E-value=8.1e-06  Score=71.07  Aligned_cols=74  Identities=8%  Similarity=0.104  Sum_probs=53.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+||||.++++.+...|+ +|+++++++++.+.+.+++     +..   ..+|..+.+..+.+. ++..  +++|+
T Consensus       165 lI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~~~~~~~-~~~~--~~~d~  233 (357)
T 2zb4_A          165 VVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD---AAINYKKDNVAEQLR-ESCP--AGVDV  233 (357)
T ss_dssp             EESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS---EEEETTTSCHHHHHH-HHCT--TCEEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc---eEEecCchHHHHHHH-HhcC--CCCCE
Confidence            6899999999999999999999 9999999987766544322     222   235777644333332 2221  27999


Q ss_pred             EEEccc
Q 023054           80 LINNAG   85 (288)
Q Consensus        80 lv~~ag   85 (288)
                      +|+|+|
T Consensus       234 vi~~~G  239 (357)
T 2zb4_A          234 YFDNVG  239 (357)
T ss_dssp             EEESCC
T ss_pred             EEECCC
Confidence            999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.01  E-value=1.7e-05  Score=68.98  Aligned_cols=75  Identities=13%  Similarity=0.171  Sum_probs=54.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+||||.++++.+...|++|+++++++++.+.+ +++     +..   ..+|..+.+..+.+.+...  ..++|++
T Consensus       167 lV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v  235 (354)
T 2j8z_A          167 LIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKEDFSEATLKFTK--GAGVNLI  235 (354)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTSCHHHHHHHHTT--TSCEEEE
T ss_pred             EEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCChHHHHHHHHHhc--CCCceEE
Confidence            5899999999999999999999999999998877655 333     222   2357776555544433221  1369999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |+|+|.
T Consensus       236 i~~~G~  241 (354)
T 2j8z_A          236 LDCIGG  241 (354)
T ss_dssp             EESSCG
T ss_pred             EECCCc
Confidence            999983

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.01  E-value=7.4e-05  Score=64.15  Aligned_cols=158  Identities=15%  Similarity=0.076  Sum_probs=88.7

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      +||||+|.+|..++..|+.+|  ..|++++++++  +.....+.......++..    +.+..+..+.+       .+.|
T Consensus        12 ~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al-------~gaD   78 (326)
T 1smk_A           12 AILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL-------TGMD   78 (326)
T ss_dssp             EEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH-------TTCS
T ss_pred             EEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc-------CCCC
Confidence            489999999999999999998  68999998876  222233333211112222    22233443333       2689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||++||......    ..-.+.+..|+.....+.+.+..+-.        .+.|+++|-+.....+.-   ...+....
T Consensus        79 vVi~~ag~~~~~g----~~r~dl~~~N~~~~~~i~~~i~~~~p--------~~~viv~SNPv~~~~~~~---t~~~~~~~  143 (326)
T 1smk_A           79 LIIVPAGVPRKPG----MTRDDLFKINAGIVKTLCEGIAKCCP--------RAIVNLISNPVNSTVPIA---AEVFKKAG  143 (326)
T ss_dssp             EEEECCCCCCCSS----CCCSHHHHHHHHHHHHHHHHHHHHCT--------TSEEEECCSSHHHHHHHH---HHHHHHHT
T ss_pred             EEEEcCCcCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhCC--------CeEEEEECCchHHHHHHH---HHHHHHcc
Confidence            9999999754221    12345678888888777777765431        345666555554410000   00000111


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcc
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQE  186 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~  186 (288)
                      ++++....+.+-.--..+-..+++.++-
T Consensus       144 ~~p~~rviG~~~Ld~~r~~~~la~~l~v  171 (326)
T 1smk_A          144 TYDPKRLLGVTMLDVVRANTFVAEVLGL  171 (326)
T ss_dssp             CCCTTSEEECCHHHHHHHHHHHHHHHTC
T ss_pred             CCCcccEEEEeehHHHHHHHHHHHHhCc
Confidence            3445555666433344556666777654

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.96  E-value=3.7e-05  Score=65.68  Aligned_cols=162  Identities=12%  Similarity=0.106  Sum_probs=98.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeC--ChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAAR--NMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r--~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      +||||+|+||.+++..|+.+|.  .++++++  ++++++.....+....+  +..+.+...|  |  ++.       +..
T Consensus         4 ~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~-------~al   72 (313)
T 1hye_A            4 TIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENL-------RII   72 (313)
T ss_dssp             EEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCG-------GGG
T ss_pred             EEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chH-------HHh
Confidence            4899999999999999998885  6899998  76655443333332111  1222332211  0  111       112


Q ss_pred             CCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           75 LPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      .+.|+|||.||.....    .......+..|+.....+++.+..+- +        +.|+++|.+.......       +
T Consensus        73 ~gaD~Vi~~Ag~~~~~----g~~r~dl~~~N~~i~~~i~~~i~~~~-~--------~~vlv~SNPv~~~t~~-------~  132 (313)
T 1hye_A           73 DESDVVIITSGVPRKE----GMSRMDLAKTNAKIVGKYAKKIAEIC-D--------TKIFVITNPVDVMTYK-------A  132 (313)
T ss_dssp             TTCSEEEECCSCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHHC-C--------CEEEECSSSHHHHHHH-------H
T ss_pred             CCCCEEEECCCCCCCC----CCcHHHHHHHHHHHHHHHHHHHHHhC-C--------eEEEEecCcHHHHHHH-------H
Confidence            3789999999975321    12234568888888888888887654 2        4677776665443210       0


Q ss_pred             CCCCCCCccccchh-hHHHHHHHHHHHHHHhcccCCceEE
Q 023054          155 NDRAGYSDKKAYGQ-SKLANILHANELSRRFQEEGVNITA  193 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~~~~i~v  193 (288)
                      ....++++...++. +..--..+...+++.++-....|+.
T Consensus       133 ~k~~~~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~  172 (313)
T 1hye_A          133 LVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT  172 (313)
T ss_dssp             HHHHCCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC
T ss_pred             HHhhCcChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE
Confidence            01124666677888 7766677777788877643222544

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.95  E-value=1.6e-05  Score=68.62  Aligned_cols=75  Identities=12%  Similarity=0.185  Sum_probs=54.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+||||.++++.+...|++|+++++++++.+.+.+++     +..   ..+|..+.+..+.+.+..   .+++|++
T Consensus       154 lI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~~~~~---~~~~d~v  222 (336)
T 4b7c_A          154 VISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFD---GAIDYKNEDLAAGLKREC---PKGIDVF  222 (336)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCS---EEEETTTSCHHHHHHHHC---TTCEEEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCC---EEEECCCHHHHHHHHHhc---CCCceEE
Confidence            68999999999999999999999999999988776553332     222   234777655444433322   3479999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |+|+|.
T Consensus       223 i~~~g~  228 (336)
T 4b7c_A          223 FDNVGG  228 (336)
T ss_dssp             EESSCH
T ss_pred             EECCCc
Confidence            999983

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.95  E-value=7.5e-05  Score=64.27  Aligned_cols=75  Identities=19%  Similarity=0.240  Sum_probs=52.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|+||..+++.+...|++|+++++++++.+.+. ++     +..   ..+|..+.+..+.+.+.. . ..++|++
T Consensus       153 lV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~---~~~~~~~~~~~~~~~~~~-~-~~g~D~v  221 (334)
T 3qwb_A          153 LLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EY-----GAE---YLINASKEDILRQVLKFT-N-GKGVDAS  221 (334)
T ss_dssp             EESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCS---EEEETTTSCHHHHHHHHT-T-TSCEEEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCc---EEEeCCCchHHHHHHHHh-C-CCCceEE
Confidence            58999999999999999899999999999988776432 22     222   124666654444433322 1 2369999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |+|+|.
T Consensus       222 id~~g~  227 (334)
T 3qwb_A          222 FDSVGK  227 (334)
T ss_dssp             EECCGG
T ss_pred             EECCCh
Confidence            999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.92  E-value=2.6e-05  Score=67.74  Aligned_cols=74  Identities=12%  Similarity=0.179  Sum_probs=53.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+||||.++++.+...|++|+++++++++.+.. +++     +..   ..+|..+.+..+.+.+..  ...++|++
T Consensus       175 lV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~---~~~d~~~~~~~~~~~~~~--~~~~~D~v  243 (351)
T 1yb5_A          175 LVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-----GAH---EVFNHREVNYIDKIKKYV--GEKGIDII  243 (351)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSTTHHHHHHHHH--CTTCEEEE
T ss_pred             EEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc-----CCC---EEEeCCCchHHHHHHHHc--CCCCcEEE
Confidence            5899999999999999999999999999998876633 222     222   235777765555444332  12369999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |+|+|
T Consensus       244 i~~~G  248 (351)
T 1yb5_A          244 IEMLA  248 (351)
T ss_dssp             EESCH
T ss_pred             EECCC
Confidence            99998

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.87  E-value=1.3e-05  Score=59.73  Aligned_cols=71  Identities=11%  Similarity=0.041  Sum_probs=52.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+ |++|..+++.|.+.|++|++++++++..+...    ..    ...++..|.++.+.+.++      ...+.|++
T Consensus        10 ~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~----~~~~~~~d~~~~~~l~~~------~~~~~d~v   74 (144)
T 2hmt_A           10 AVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY----ATHAVIANATEENELLSL------GIRNFEYV   74 (144)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT----CSEEEECCTTCHHHHHTT------TGGGCSEE
T ss_pred             EEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh----CCEEEEeCCCCHHHHHhc------CCCCCCEE
Confidence            47897 99999999999999999999999986654321    11    235677899886554432      12368999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |++++.
T Consensus        75 i~~~~~   80 (144)
T 2hmt_A           75 IVAIGA   80 (144)
T ss_dssp             EECCCS
T ss_pred             EECCCC
Confidence            999873

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.86  E-value=1.6e-05  Score=66.46  Aligned_cols=70  Identities=19%  Similarity=0.274  Sum_probs=51.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++...  + .+.  ..|+   +++       .+  +.+|+|
T Consensus       123 lViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~~~--~~~~---~~~-------~~--~~~Div  184 (271)
T 1nyt_A          123 LLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-SIQ--ALSM---DEL-------EG--HEFDLI  184 (271)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-SEE--ECCS---GGG-------TT--CCCSEE
T ss_pred             EEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-Cee--EecH---HHh-------cc--CCCCEE
Confidence            58898 79999999999999999999999999888877665432  1 221  2333   211       11  579999


Q ss_pred             EEccccCC
Q 023054           81 INNAGIMF   88 (288)
Q Consensus        81 v~~ag~~~   88 (288)
                      |+|++...
T Consensus       185 Vn~t~~~~  192 (271)
T 1nyt_A          185 INATSSGI  192 (271)
T ss_dssp             EECCSCGG
T ss_pred             EECCCCCC
Confidence            99998753

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.82  E-value=4.6e-05  Score=64.03  Aligned_cols=73  Identities=18%  Similarity=0.241  Sum_probs=54.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+.+...++..++.  ..++.+   +.+.+.       ..|+
T Consensus       131 lVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~~~---l~~~l~-------~~Di  197 (283)
T 3jyo_A          131 VQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARG---IEDVIA-------AADG  197 (283)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECSTT---HHHHHH-------HSSE
T ss_pred             EEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCHHH---HHHHHh-------cCCE
Confidence            57887 7999999999999998 79999999999999988887665433333  344433   223222       3699


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      |||+...
T Consensus       198 VInaTp~  204 (283)
T 3jyo_A          198 VVNATPM  204 (283)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9998754

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.78  E-value=6.3e-05  Score=65.13  Aligned_cols=75  Identities=13%  Similarity=0.180  Sum_probs=53.2

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+||++|||..+++.+... |++|+++++++++.+.+. ++     +..   ..+|..+.+..+.+. ++... +++|+
T Consensus       175 lV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~-----g~~---~~~~~~~~~~~~~~~-~~~~~-~~~d~  243 (347)
T 1jvb_A          175 LVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GAD---YVINASMQDPLAEIR-RITES-KGVDA  243 (347)
T ss_dssp             EEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHHHH-HHTTT-SCEEE
T ss_pred             EEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCC---EEecCCCccHHHHHH-HHhcC-CCceE
Confidence            68999999999999999998 999999999988776543 23     222   224666654433332 22211 47999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|+|+|.
T Consensus       244 vi~~~g~  250 (347)
T 1jvb_A          244 VIDLNNS  250 (347)
T ss_dssp             EEESCCC
T ss_pred             EEECCCC
Confidence            9999984

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.77  E-value=3.2e-05  Score=69.42  Aligned_cols=80  Identities=10%  Similarity=0.195  Sum_probs=53.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEE--ecCC---------ChHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLK--LDLS---------SIASIKDFAQN   69 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~Dl~---------~~~~~~~~~~~   69 (288)
                      ||+||+|+||..+++.+...|++|+++++++++.+.+. ++     +....+-.  .|+.         +.+++..+.+.
T Consensus       225 lV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (447)
T 4a0s_A          225 LIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-AL-----GCDLVINRAELGITDDIADDPRRVVETGRKLAKL  298 (447)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCEEEecccccccccccccccccchhhhHHHHH
Confidence            58999999999999988889999999999888776542 22     22222211  1221         12344455555


Q ss_pred             HHhcC-CCcceEEEcccc
Q 023054           70 FIALN-LPLNILINNAGI   86 (288)
Q Consensus        70 ~~~~~-~~id~lv~~ag~   86 (288)
                      +.+.. .++|++|+++|.
T Consensus       299 v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          299 VVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHSSCCSEEEECSCH
T ss_pred             HHHHhCCCceEEEECCCc
Confidence            55543 369999999983

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.77  E-value=0.0001  Score=63.91  Aligned_cols=74  Identities=18%  Similarity=0.267  Sum_probs=54.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|+||.++++.+...|++|+++++++++.+.+.+ +     +...   .+|..+.+..+.+.+..   ..++|++
T Consensus       172 lV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---~~~~~~~~~~~~~~~~~---~~g~Dvv  239 (353)
T 4dup_A          172 LIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L-----GAKR---GINYRSEDFAAVIKAET---GQGVDII  239 (353)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHHHHHHH---SSCEEEE
T ss_pred             EEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCCE---EEeCCchHHHHHHHHHh---CCCceEE
Confidence            589999999999999999999999999999988765443 2     2221   24666655444444332   4579999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |+|+|.
T Consensus       240 id~~g~  245 (353)
T 4dup_A          240 LDMIGA  245 (353)
T ss_dssp             EESCCG
T ss_pred             EECCCH
Confidence            999983

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.75  E-value=0.00014  Score=61.79  Aligned_cols=153  Identities=13%  Similarity=0.066  Sum_probs=90.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeC--ChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAAR--NMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r--~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      +||||+|.+|..++..|+.+|.  .++++++  ++++++.....+..... ...+.+.. |  +.+.           ..
T Consensus         4 ~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------~~   69 (303)
T 1o6z_A            4 SVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------TA   69 (303)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------GT
T ss_pred             EEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------hC
Confidence            4899999999999999998885  6999999  77665544444433211 12233332 2  2111           23


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +.|+|||.||.....    ...-.+.+..|+.....+.+.+..+-   .     .+.|+++|-+......       -+.
T Consensus        70 ~aDvVi~~ag~~~~~----g~~r~dl~~~N~~i~~~i~~~i~~~~---p-----~~~viv~SNPv~~~~~-------~~~  130 (303)
T 1o6z_A           70 GSDVVVITAGIPRQP----GQTRIDLAGDNAPIMEDIQSSLDEHN---D-----DYISLTTSNPVDLLNR-------HLY  130 (303)
T ss_dssp             TCSEEEECCCCCCCT----TCCHHHHHHHHHHHHHHHHHHHHTTC---S-----CCEEEECCSSHHHHHH-------HHH
T ss_pred             CCCEEEEcCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHC---C-----CcEEEEeCChHHHHHH-------HHH
Confidence            689999999975322    11224567777777777666665431   1     3566665555443320       011


Q ss_pred             CCCCCCccccchh-hHHHHHHHHHHHHHHhcc
Q 023054          156 DRAGYSDKKAYGQ-SKLANILHANELSRRFQE  186 (288)
Q Consensus       156 ~~~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~  186 (288)
                      ...++++....|. +-.--..+-..+++.++-
T Consensus       131 ~~~~~p~~rviG~gt~Ld~~r~~~~la~~l~v  162 (303)
T 1o6z_A          131 EAGDRSREQVIGFGGRLDSARFRYVLSEEFDA  162 (303)
T ss_dssp             HHSSSCGGGEEECCHHHHHHHHHHHHHHHHTC
T ss_pred             HHcCCCHHHeeecccchhHHHHHHHHHHHhCc
Confidence            1224666667777 444345666667777764

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.71  E-value=0.00015  Score=54.86  Aligned_cols=73  Identities=14%  Similarity=0.102  Sum_probs=54.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|+ |.+|+.+++.|.++|++|++++++ ++..+......     ...+.++..|.++.+.+.+.      ...+.|.
T Consensus         7 lI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a------~i~~ad~   74 (153)
T 1id1_A            7 IVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA------GIDRCRA   74 (153)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH------TTTTCSE
T ss_pred             EEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc------ChhhCCE
Confidence            47775 999999999999999999999997 45554444332     23478889999998765543      1236788


Q ss_pred             EEEccc
Q 023054           80 LINNAG   85 (288)
Q Consensus        80 lv~~ag   85 (288)
                      +|.+.+
T Consensus        75 vi~~~~   80 (153)
T 1id1_A           75 ILALSD   80 (153)
T ss_dssp             EEECSS
T ss_pred             EEEecC
Confidence            988775

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.69  E-value=0.00013  Score=63.00  Aligned_cols=74  Identities=15%  Similarity=0.247  Sum_probs=53.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+||||..+++.+...|++|+++++++++.+.+. ++     +...   .+|.++.+..+.+ .++.. ..++|++
T Consensus       171 lV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~~---~~d~~~~~~~~~~-~~~~~-~~~~d~v  239 (343)
T 2eih_A          171 LVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GADE---TVNYTHPDWPKEV-RRLTG-GKGADKV  239 (343)
T ss_dssp             EECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTSTTHHHHH-HHHTT-TTCEEEE
T ss_pred             EEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEcCCcccHHHHH-HHHhC-CCCceEE
Confidence            68999999999999999999999999999988776553 22     2221   2577765433332 22211 2379999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |+++|
T Consensus       240 i~~~g  244 (343)
T 2eih_A          240 VDHTG  244 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.69  E-value=0.00019  Score=61.00  Aligned_cols=76  Identities=14%  Similarity=0.169  Sum_probs=55.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCC---hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARN---MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      ||+|+ ||.|++++..|++.|+ +|++++|+   .++++++.+++.... +  ..+...++.+.+...+.+.       .
T Consensus       152 lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~--~~v~~~~~~~l~~~~~~l~-------~  220 (312)
T 3t4e_A          152 VLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-D--CVVTVTDLADQHAFTEALA-------S  220 (312)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-S--CEEEEEETTCHHHHHHHHH-------H
T ss_pred             EEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-C--cceEEechHhhhhhHhhcc-------C
Confidence            57887 8999999999999998 89999999   888888888876653 2  2333456666433333222       4


Q ss_pred             cceEEEccccC
Q 023054           77 LNILINNAGIM   87 (288)
Q Consensus        77 id~lv~~ag~~   87 (288)
                      .|+|||+....
T Consensus       221 ~DiIINaTp~G  231 (312)
T 3t4e_A          221 ADILTNGTKVG  231 (312)
T ss_dssp             CSEEEECSSTT
T ss_pred             ceEEEECCcCC
Confidence            69999987653

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.67  E-value=0.00019  Score=62.13  Aligned_cols=75  Identities=13%  Similarity=0.037  Sum_probs=52.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|+||...++.+...|++|+++++++++.+.+. ++     +.. .  ..|..+.+..+.+.+....  .++|++
T Consensus       169 li~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~-~--~~~~~~~~~~~~v~~~~~~--~g~D~v  237 (349)
T 3pi7_A          169 VMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAA-H--VLNEKAPDFEATLREVMKA--EQPRIF  237 (349)
T ss_dssp             EESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCS-E--EEETTSTTHHHHHHHHHHH--HCCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC-E--EEECCcHHHHHHHHHHhcC--CCCcEE
Confidence            58899999999999988889999999999988776543 22     222 1  2466554444443332221  269999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |.++|.
T Consensus       238 id~~g~  243 (349)
T 3pi7_A          238 LDAVTG  243 (349)
T ss_dssp             EESSCH
T ss_pred             EECCCC
Confidence            999984

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.60  E-value=0.0003  Score=51.91  Aligned_cols=71  Identities=15%  Similarity=0.208  Sum_probs=52.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+ |.+|..+++.|.+.|++|++++++++..+...+.       ..+.++..|.++.+.+.+.      ...+.|++
T Consensus         8 ~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~------~~~~~d~v   73 (140)
T 1lss_A            8 IIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------IDALVINGDCTKIKTLEDA------GIEDADMY   73 (140)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------CSSEEEESCTTSHHHHHHT------TTTTCSEE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh-------cCcEEEEcCCCCHHHHHHc------CcccCCEE
Confidence            47776 9999999999999999999999998776554321       1245677898886654321      13468999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |++.+
T Consensus        74 i~~~~   78 (140)
T 1lss_A           74 IAVTG   78 (140)
T ss_dssp             EECCS
T ss_pred             EEeeC
Confidence            99874

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.57  E-value=0.00021  Score=61.27  Aligned_cols=75  Identities=16%  Similarity=0.127  Sum_probs=53.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|+||..+++.+...|++|+++++++++.+.+. ++     +..   ...|..+.+..+.+.+..  ...++|++
T Consensus       145 lV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~---~~~~~~~~~~~~~~~~~~--~~~g~Dvv  213 (325)
T 3jyn_A          145 LFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAW---ETIDYSHEDVAKRVLELT--DGKKCPVV  213 (325)
T ss_dssp             EESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS---EEEETTTSCHHHHHHHHT--TTCCEEEE
T ss_pred             EEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCC---EEEeCCCccHHHHHHHHh--CCCCceEE
Confidence            58999999999999999889999999999988776543 22     222   124666655444433322  12369999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |+|+|.
T Consensus       214 id~~g~  219 (325)
T 3jyn_A          214 YDGVGQ  219 (325)
T ss_dssp             EESSCG
T ss_pred             EECCCh
Confidence            999984

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.50  E-value=0.00039  Score=57.22  Aligned_cols=75  Identities=12%  Similarity=0.263  Sum_probs=57.8

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIA   61 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   61 (288)
                      |.| .||+|.++++.|++.|. +|++++++.                   .+.+.+.+.+...+|..++..+..++++ +
T Consensus        36 VvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~~-~  113 (249)
T 1jw9_B           36 IVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDD-A  113 (249)
T ss_dssp             EEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCCH-H
T ss_pred             EEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCCH-h
Confidence            555 57999999999999997 899999987                   7888888888887777777777777763 3


Q ss_pred             HHHHHHHHHHhcCCCcceEEEccc
Q 023054           62 SIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        62 ~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      .+.+++.       ..|+||.+..
T Consensus       114 ~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          114 ELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             HHHHHHH-------TSSEEEECCS
T ss_pred             HHHHHHh-------CCCEEEEeCC
Confidence            3333332       5799998764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.48  E-value=0.00012  Score=61.17  Aligned_cols=70  Identities=13%  Similarity=0.237  Sum_probs=50.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+...  + .+..  +|+.+          +.+  +..|+|
T Consensus       123 lvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--~-~~~~--~~~~~----------~~~--~~~Div  184 (272)
T 1p77_A          123 LILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--G-NIQA--VSMDS----------IPL--QTYDLV  184 (272)
T ss_dssp             EEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--S-CEEE--EEGGG----------CCC--SCCSEE
T ss_pred             EEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--C-CeEE--eeHHH----------hcc--CCCCEE
Confidence            47887 89999999999999999999999999988888776432  1 2222  33311          101  479999


Q ss_pred             EEccccCC
Q 023054           81 INNAGIMF   88 (288)
Q Consensus        81 v~~ag~~~   88 (288)
                      |++++...
T Consensus       185 In~t~~~~  192 (272)
T 1p77_A          185 INATSAGL  192 (272)
T ss_dssp             EECCCC--
T ss_pred             EECCCCCC
Confidence            99998653

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.46  E-value=0.00023  Score=61.39  Aligned_cols=75  Identities=17%  Similarity=0.167  Sum_probs=52.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+++||..+++.+...|++|+++++++++.+.+.+ +     +...   .+|..+.+..+.+.+..  ...++|++
T Consensus       149 lV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~---~~~~~~~~~~~~~~~~~--~~~g~Dvv  217 (340)
T 3gms_A          149 LVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAY---VIDTSTAPLYETVMELT--NGIGADAA  217 (340)
T ss_dssp             EESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE---EEETTTSCHHHHHHHHT--TTSCEEEE
T ss_pred             EEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcE---EEeCCcccHHHHHHHHh--CCCCCcEE
Confidence            589999999999998888899999999998887665443 2     2322   24666654444333321  12369999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |+|+|.
T Consensus       218 id~~g~  223 (340)
T 3gms_A          218 IDSIGG  223 (340)
T ss_dssp             EESSCH
T ss_pred             EECCCC
Confidence            999984

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.44  E-value=0.00033  Score=61.05  Aligned_cols=69  Identities=19%  Similarity=0.245  Sum_probs=55.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|| |++|+.+++.|++ .++|.+++++.+.++++.         ..+..+.+|+.|.+++.++++       +.|+|
T Consensus        20 lvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~---------~~~~~~~~d~~d~~~l~~~~~-------~~DvV   81 (365)
T 3abi_A           20 LILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK---------EFATPLKVDASNFDKLVEVMK-------EFELV   81 (365)
T ss_dssp             EEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT---------TTSEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh---------ccCCcEEEecCCHHHHHHHHh-------CCCEE
Confidence            46788 9999999999975 579999999988776542         235678899999988877765       57999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      |++++..
T Consensus        82 i~~~p~~   88 (365)
T 3abi_A           82 IGALPGF   88 (365)
T ss_dssp             EECCCGG
T ss_pred             EEecCCc
Confidence            9998754

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.35  E-value=0.00017  Score=62.82  Aligned_cols=69  Identities=14%  Similarity=0.216  Sum_probs=48.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh---HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM---AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      ||+|| |+||..+++.+...|++|+++++++   ++.+.+ .++     +.  ..+  | .+ +..+.+.+  ..  +++
T Consensus       185 lV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~-----ga--~~v--~-~~-~~~~~~~~--~~--~~~  247 (366)
T 2cdc_A          185 LVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET-----KT--NYY--N-SS-NGYDKLKD--SV--GKF  247 (366)
T ss_dssp             EEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH-----TC--EEE--E-CT-TCSHHHHH--HH--CCE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh-----CC--cee--c-hH-HHHHHHHH--hC--CCC
Confidence            58999 9999999999988999999999987   665433 333     22  233  5 54 32233332  22  579


Q ss_pred             ceEEEcccc
Q 023054           78 NILINNAGI   86 (288)
Q Consensus        78 d~lv~~ag~   86 (288)
                      |++|+++|.
T Consensus       248 d~vid~~g~  256 (366)
T 2cdc_A          248 DVIIDATGA  256 (366)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.35  E-value=0.00058  Score=58.88  Aligned_cols=74  Identities=19%  Similarity=0.241  Sum_probs=49.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|+||..+++.+...|++|+++++++++.+.+.+ +     +.. .+  .|.. . ++.+.+.++.. ..++|++
T Consensus       164 lV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----ga~-~v--~~~~-~-~~~~~v~~~~~-~~g~Dvv  231 (342)
T 4eye_A          164 LVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V-----GAD-IV--LPLE-E-GWAKAVREATG-GAGVDMV  231 (342)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCS-EE--EESS-T-THHHHHHHHTT-TSCEEEE
T ss_pred             EEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCc-EE--ecCc-h-hHHHHHHHHhC-CCCceEE
Confidence            589999999999999999999999999999887754433 2     222 22  2444 2 22222222211 1269999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |+|+|.
T Consensus       232 id~~g~  237 (342)
T 4eye_A          232 VDPIGG  237 (342)
T ss_dssp             EESCC-
T ss_pred             EECCch
Confidence            999984

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.32  E-value=0.00067  Score=60.95  Aligned_cols=80  Identities=15%  Similarity=0.172  Sum_probs=55.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEE--Eec--------CCChHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTL--KLD--------LSSIASIKDFAQNF   70 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~D--------l~~~~~~~~~~~~~   70 (288)
                      ||+||+|+||...++.+...|++|+++++++++++.+ +++     +....+-  ..|        .++..+++.+.+.+
T Consensus       233 lV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i  306 (456)
T 3krt_A          233 LIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI  306 (456)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence            5899999999999988888999999999988877654 333     2221111  011        23455666666776


Q ss_pred             HhcC--CCcceEEEcccc
Q 023054           71 IALN--LPLNILINNAGI   86 (288)
Q Consensus        71 ~~~~--~~id~lv~~ag~   86 (288)
                      .+..  .++|++|.++|.
T Consensus       307 ~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          307 RELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHTSCCEEEEEECSCH
T ss_pred             HHHhCCCCCcEEEEcCCc
Confidence            6643  379999999983

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.30  E-value=0.00063  Score=59.17  Aligned_cols=73  Identities=11%  Similarity=0.153  Sum_probs=50.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|+||..+++.+...|++|+++++++++.+.+.+ +     +...   .+|..+.+. .+.+.+..  ..++|++
T Consensus       168 lV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~-----Ga~~---~~~~~~~~~-~~~~~~~~--~~g~D~v  235 (362)
T 2c0c_A          168 LVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L-----GCDR---PINYKTEPV-GTVLKQEY--PEGVDVV  235 (362)
T ss_dssp             EETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T-----TCSE---EEETTTSCH-HHHHHHHC--TTCEEEE
T ss_pred             EEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c-----CCcE---EEecCChhH-HHHHHHhc--CCCCCEE
Confidence            589999999999999998999999999999877665432 2     2221   235554332 22232221  2479999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |+|+|
T Consensus       236 id~~g  240 (362)
T 2c0c_A          236 YESVG  240 (362)
T ss_dssp             EECSC
T ss_pred             EECCC
Confidence            99998

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.27  E-value=0.00029  Score=61.43  Aligned_cols=70  Identities=16%  Similarity=0.138  Sum_probs=49.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+|+ |+||..+++.+...|++|+++++++++.+...+++     +.. .  .+|..+.+.+.       +..+++|++
T Consensus       192 lV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~-~--v~~~~~~~~~~-------~~~~~~D~v  255 (366)
T 1yqd_A          192 GIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GAD-S--FLVSRDQEQMQ-------AAAGTLDGI  255 (366)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCS-E--EEETTCHHHHH-------HTTTCEEEE
T ss_pred             EEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCc-e--EEeccCHHHHH-------HhhCCCCEE
Confidence            58886 99999999988889999999999987766544322     222 1  24666643332       223579999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |.++|.
T Consensus       256 id~~g~  261 (366)
T 1yqd_A          256 IDTVSA  261 (366)
T ss_dssp             EECCSS
T ss_pred             EECCCc
Confidence            999985

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.26  E-value=0.00095  Score=49.62  Aligned_cols=69  Identities=13%  Similarity=0.050  Sum_probs=52.5

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      |.|+ |.+|..+++.|.++|++|++++++++..+...+        ..+.++..|.++.+.++++      ...+.|.+|
T Consensus        12 IiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a------~i~~ad~vi   76 (140)
T 3fwz_A           12 LVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLA------HLECAKWLI   76 (140)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHT------TGGGCSEEE
T ss_pred             EECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhc------CcccCCEEE
Confidence            5564 889999999999999999999999988765442        1356788999998766543      112578888


Q ss_pred             Eccc
Q 023054           82 NNAG   85 (288)
Q Consensus        82 ~~ag   85 (288)
                      .+.+
T Consensus        77 ~~~~   80 (140)
T 3fwz_A           77 LTIP   80 (140)
T ss_dssp             ECCS
T ss_pred             EECC
Confidence            7665

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.25  E-value=0.0028  Score=53.93  Aligned_cols=158  Identities=14%  Similarity=0.086  Sum_probs=86.8

Q ss_pred             CcccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      .|+||+|.+|..++..|+..|  ..|+++++++  .+.....+.......++....    ...+.++.+       .+.|
T Consensus         4 ~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~-------~~aD   70 (314)
T 1mld_A            4 AVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCL-------KGCD   70 (314)
T ss_dssp             EEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHH-------TTCS
T ss_pred             EEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHh-------CCCC
Confidence            389999999999999999988  6899999987  233333443321111222221    012233222       2689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|+.+|......    +.-.+.+..|......+.+.+.++.   +     .+.|+++|-+.....+...   ..+....
T Consensus        71 vVvi~ag~~~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~---p-----~a~viv~sNPv~~~~~i~~---~~~~~~~  135 (314)
T 1mld_A           71 VVVIPAGVPRKPG----MTRDDLFNTNATIVATLTAACAQHC---P-----DAMICIISNPVNSTIPITA---EVFKKHG  135 (314)
T ss_dssp             EEEECCSCCCCTT----CCGGGGHHHHHHHHHHHHHHHHHHC---T-----TSEEEECSSCHHHHHHHHH---HHHHHTT
T ss_pred             EEEECCCcCCCCC----CcHHHHHHHHHHHHHHHHHHHHhhC---C-----CeEEEEECCCcchhHHHHH---HHHHHcC
Confidence            9999999764321    1123445666665555555554432   1     5788888776654320000   0000111


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcc
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQE  186 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~  186 (288)
                      ++++....+.+-.--..+-..+++.++-
T Consensus       136 ~~p~~rvig~t~Ld~~r~~~~la~~l~v  163 (314)
T 1mld_A          136 VYNPNKIFGVTTLDIVRANAFVAELKGL  163 (314)
T ss_dssp             CCCTTSEEECCHHHHHHHHHHHHHHTTC
T ss_pred             CCCcceEEEeecccHHHHHHHHHHHhCc
Confidence            3445555666443344556666766653

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.23  E-value=0.00033  Score=59.25  Aligned_cols=71  Identities=17%  Similarity=0.131  Sum_probs=49.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+.+....  .  .++     +.+++       .+.....|+
T Consensus       145 lVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~--~~~-----~~~~~-------~~~~~~aDi  207 (297)
T 2egg_A          145 LVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--S--AYF-----SLAEA-------ETRLAEYDI  207 (297)
T ss_dssp             EEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--C--CEE-----CHHHH-------HHTGGGCSE
T ss_pred             EEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--C--cee-----eHHHH-------HhhhccCCE
Confidence            47786 7999999999999998 99999999988887766542211  0  111     22222       222346899


Q ss_pred             EEEccccCC
Q 023054           80 LINNAGIMF   88 (288)
Q Consensus        80 lv~~ag~~~   88 (288)
                      ||++.+...
T Consensus       208 vIn~t~~~~  216 (297)
T 2egg_A          208 IINTTSVGM  216 (297)
T ss_dssp             EEECSCTTC
T ss_pred             EEECCCCCC
Confidence            999998653

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.22  E-value=0.0011  Score=57.68  Aligned_cols=71  Identities=24%  Similarity=0.236  Sum_probs=50.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+ ||+|+++++.+...|++|++++|++++++.+.+....     .+..   +..+.+++.+.+.       ..|++
T Consensus       171 lViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~-------~~DvV  234 (361)
T 1pjc_A          171 VILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVEL---LYSNSAEIETAVA-------EADLL  234 (361)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEE---EECCHHHHHHHHH-------TCSEE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEe---eeCCHHHHHHHHc-------CCCEE
Confidence            57898 9999999999999999999999999888776554321     2222   2233343333222       68999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      |++++..
T Consensus       235 I~~~~~~  241 (361)
T 1pjc_A          235 IGAVLVP  241 (361)
T ss_dssp             EECCCCT
T ss_pred             EECCCcC
Confidence            9999864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.21  E-value=0.0011  Score=57.09  Aligned_cols=72  Identities=13%  Similarity=0.055  Sum_probs=51.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+|| |+||..+++.+...|++|+++++++++.+.+.+ +     +..   ..+|..+.+..+.+. ++.   +++|++
T Consensus       169 lV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~---~~~d~~~~~~~~~~~-~~~---~~~d~v  234 (339)
T 1rjw_A          169 AIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-L-----GAD---LVVNPLKEDAAKFMK-EKV---GGVHAA  234 (339)
T ss_dssp             EEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T-----TCS---EEECTTTSCHHHHHH-HHH---SSEEEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-C-----CCC---EEecCCCccHHHHHH-HHh---CCCCEE
Confidence            58999 889999999988899999999999887765432 2     222   125776544333332 222   579999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |+++|.
T Consensus       235 id~~g~  240 (339)
T 1rjw_A          235 VVTAVS  240 (339)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999984

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.11  E-value=0.00078  Score=54.08  Aligned_cols=71  Identities=17%  Similarity=0.164  Sum_probs=54.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|+ |.+|..+++.|.++|++|++++++++..++..+.       ..+.++..|.++.+.+++.      ...+.|++
T Consensus         4 iIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a------~i~~ad~v   69 (218)
T 3l4b_C            4 IIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDA------EVSKNDVV   69 (218)
T ss_dssp             EEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHH------TCCTTCEE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhc------CcccCCEE
Confidence            47785 8999999999999999999999999887665432       1356788999997766543      12467888


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |.+.+
T Consensus        70 i~~~~   74 (218)
T 3l4b_C           70 VILTP   74 (218)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            87664

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.09  E-value=0.0021  Score=55.43  Aligned_cols=73  Identities=12%  Similarity=0.127  Sum_probs=50.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|+||...++.+...|++|+++++++++.+.+.+ +     +.. .+  +|..+ + +.+.+.++  ...++|++
T Consensus       155 lV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~-~v--i~~~~-~-~~~~~~~~--~~~g~Dvv  221 (346)
T 3fbg_A          155 LIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GAD-IV--LNHKE-S-LLNQFKTQ--GIELVDYV  221 (346)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCS-EE--ECTTS-C-HHHHHHHH--TCCCEEEE
T ss_pred             EEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCc-EE--EECCc-c-HHHHHHHh--CCCCccEE
Confidence            589999999999999888899999999999887665443 3     222 12  34433 2 22222332  23479999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      +.++|.
T Consensus       222 ~d~~g~  227 (346)
T 3fbg_A          222 FCTFNT  227 (346)
T ss_dssp             EESSCH
T ss_pred             EECCCc
Confidence            999884

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.09  E-value=0.0015  Score=56.36  Aligned_cols=74  Identities=15%  Similarity=0.207  Sum_probs=49.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|+ |+||..+++.+...|+ +|+++++++++.+.+. ++     +.. .  ..|..+.+..+.+ .++.. ..++|+
T Consensus       172 lV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~-~--~~~~~~~~~~~~v-~~~~~-g~g~D~  239 (348)
T 2d8a_A          172 LITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GAD-Y--VINPFEEDVVKEV-MDITD-GNGVDV  239 (348)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCS-E--EECTTTSCHHHHH-HHHTT-TSCEEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-E--EECCCCcCHHHHH-HHHcC-CCCCCE
Confidence            58999 9999999998888999 8999999987766443 33     222 1  2365553322222 22211 126999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       240 vid~~g~  246 (348)
T 2d8a_A          240 FLEFSGA  246 (348)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999984

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.05  E-value=0.0024  Score=53.41  Aligned_cols=68  Identities=16%  Similarity=0.317  Sum_probs=51.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+.+...+   .+...  ++.+.             ....|+
T Consensus       130 lvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~--~~~~l-------------~~~aDi  190 (281)
T 3o8q_A          130 LLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQ--AFEQL-------------KQSYDV  190 (281)
T ss_dssp             EEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEE--EGGGC-------------CSCEEE
T ss_pred             EEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEe--eHHHh-------------cCCCCE
Confidence            47887 7999999999999996 99999999999998888876532   24433  22211             036899


Q ss_pred             EEEccccC
Q 023054           80 LINNAGIM   87 (288)
Q Consensus        80 lv~~ag~~   87 (288)
                      ||++....
T Consensus       191 IInaTp~g  198 (281)
T 3o8q_A          191 IINSTSAS  198 (281)
T ss_dssp             EEECSCCC
T ss_pred             EEEcCcCC
Confidence            99987654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.04  E-value=0.0013  Score=54.85  Aligned_cols=68  Identities=19%  Similarity=0.265  Sum_probs=49.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++..    ..+..+  ++.+..          .  ...|+
T Consensus       124 lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~l~----------~--~~~Di  184 (272)
T 3pwz_A          124 LLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEALE----------G--QSFDI  184 (272)
T ss_dssp             EEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGGGT----------T--CCCSE
T ss_pred             EEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHHhc----------c--cCCCE
Confidence            47887 7999999999999996 999999999998888877643    123333  222211          1  36899


Q ss_pred             EEEccccC
Q 023054           80 LINNAGIM   87 (288)
Q Consensus        80 lv~~ag~~   87 (288)
                      |||+....
T Consensus       185 vInaTp~g  192 (272)
T 3pwz_A          185 VVNATSAS  192 (272)
T ss_dssp             EEECSSGG
T ss_pred             EEECCCCC
Confidence            99987543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.04  E-value=0.0018  Score=55.85  Aligned_cols=71  Identities=17%  Similarity=0.258  Sum_probs=48.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|+||..+++.+...|++|+++ +++++++.+ .++     +...    +| .+.+..+.+ .+... ..++|++
T Consensus       155 lV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~~~~~~~~-~~~~~-~~g~D~v  220 (343)
T 3gaz_A          155 LIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-ASREPEDYA-AEHTA-GQGFDLV  220 (343)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TTSCHHHHH-HHHHT-TSCEEEE
T ss_pred             EEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cCCCHHHHH-HHHhc-CCCceEE
Confidence            589999999999999998999999999 777765543 333     3322    45 433333332 22221 2369999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |.++|
T Consensus       221 id~~g  225 (343)
T 3gaz_A          221 YDTLG  225 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.04  E-value=0.0039  Score=52.33  Aligned_cols=80  Identities=11%  Similarity=0.278  Sum_probs=62.5

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh------------------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM------------------AAANEARQLILKEDDTARVDTLKLDLSSIASIKD   65 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   65 (288)
                      |.||+|.++++.|++.|. ++.+++.+.                  .+.+.+.+.+...+|..++..+..++++.+.+..
T Consensus        43 GaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~  122 (292)
T 3h8v_A           43 GVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQH  122 (292)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTTSHHHHHH
T ss_pred             CcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCCcHHHHHH
Confidence            568999999999999996 799998766                  5677777888888888888888888988777777


Q ss_pred             HHHHHHhc----CCCcceEEEcc
Q 023054           66 FAQNFIAL----NLPLNILINNA   84 (288)
Q Consensus        66 ~~~~~~~~----~~~id~lv~~a   84 (288)
                      +++.+...    ....|+||.+.
T Consensus       123 ~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          123 FMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             HHHHHHHBSSSTTBCCSEEEECC
T ss_pred             HhhhhcccccccCCCCCEEEECC
Confidence            76554321    13688888655

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.96  E-value=0.0037  Score=53.59  Aligned_cols=119  Identities=7%  Similarity=-0.042  Sum_probs=72.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--E-----EEEEeCCh--HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKA--H-----VIIAARNM--AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFI   71 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~-----V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (288)
                      .||||+|.||.+++..|+..|.  .     |+++++++  +.++.....+....... +.  ....++  ..   .    
T Consensus         7 ~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~-~~--~~~~~~--~~---~----   74 (333)
T 5mdh_A            7 LVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL-LK--DVIATD--KE---E----   74 (333)
T ss_dssp             EESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT-EE--EEEEES--CH---H----
T ss_pred             EEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc-cC--CEEEcC--Cc---H----
Confidence            4899999999999999998875  4     99999974  45555555555421111 11  111111  11   1    


Q ss_pred             hcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCC-eEEEEcCccccc
Q 023054           72 ALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEG-RIVNLSSIAHQY  143 (288)
Q Consensus        72 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g-~iv~vsS~~~~~  143 (288)
                      +...+.|++|+.||.....    .+.-.+.++.|......+...+..+-.        ++ +|+++|-+.-.+
T Consensus        75 ~~~~daDvVvitAg~prkp----G~tR~dll~~N~~i~~~i~~~i~~~~~--------~~~~vivvsNPvd~~  135 (333)
T 5mdh_A           75 IAFKDLDVAILVGSMPRRD----GMERKDLLKANVKIFKCQGAALDKYAK--------KSVKVIVVGNPANTN  135 (333)
T ss_dssp             HHTTTCSEEEECCSCCCCT----TCCTTTTHHHHHHHHHHHHHHHHHHSC--------TTCEEEECSSSHHHH
T ss_pred             HHhCCCCEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCC--------CCeEEEEcCCchHHH
Confidence            1123789999999975321    123455677777766666555544321        34 588887765443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.96  E-value=0.0011  Score=56.06  Aligned_cols=68  Identities=12%  Similarity=0.136  Sum_probs=47.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC-hHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+||+|++|..+++.+...|++|+++++++++.+.+. ++     +.. .  ..|..+ .+..    +.+    .++|+
T Consensus       130 lV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~-~--~~~~~~~~~~~----~~~----~~~d~  192 (302)
T 1iz0_A          130 LVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAE-E--AATYAEVPERA----KAW----GGLDL  192 (302)
T ss_dssp             EESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCS-E--EEEGGGHHHHH----HHT----TSEEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCC-E--EEECCcchhHH----HHh----cCceE
Confidence            58999999999999988889999999999887766442 22     222 1  235544 2222    222    47999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|+ +|.
T Consensus       193 vid-~g~  198 (302)
T 1iz0_A          193 VLE-VRG  198 (302)
T ss_dssp             EEE-CSC
T ss_pred             EEE-CCH
Confidence            999 873

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=96.95  E-value=0.00053  Score=51.94  Aligned_cols=71  Identities=14%  Similarity=0.112  Sum_probs=49.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|+ |.+|..+++.|.+.|++|++++|+++..+.+..    .   ....++..|.++.+.+.+.      .....|+|
T Consensus        23 ~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----~---~g~~~~~~d~~~~~~l~~~------~~~~ad~V   88 (155)
T 2g1u_A           23 VIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----E---FSGFTVVGDAAEFETLKEC------GMEKADMV   88 (155)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----T---CCSEEEESCTTSHHHHHTT------TGGGCSEE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----c---CCCcEEEecCCCHHHHHHc------CcccCCEE
Confidence            46775 999999999999999999999999876543210    1   1245667788875543321      12357999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |.+.+
T Consensus        89 i~~~~   93 (155)
T 2g1u_A           89 FAFTN   93 (155)
T ss_dssp             EECSS
T ss_pred             EEEeC
Confidence            98876

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.95  E-value=0.0011  Score=51.65  Aligned_cols=71  Identities=14%  Similarity=0.081  Sum_probs=51.7

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.| .|.+|..+++.|.+. |++|++++++++..+.+.+    .    .+.++..|.++.+.+.++     ....+.|+
T Consensus        43 ~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~-----~~~~~ad~  108 (183)
T 3c85_A           43 LILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERI-----LDTGHVKL  108 (183)
T ss_dssp             EEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTB-----CSCCCCCE
T ss_pred             EEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhc-----cCCCCCCE
Confidence            3666 599999999999999 9999999999987665332    1    245677899886644322     01346899


Q ss_pred             EEEccc
Q 023054           80 LINNAG   85 (288)
Q Consensus        80 lv~~ag   85 (288)
                      ||.+.+
T Consensus       109 vi~~~~  114 (183)
T 3c85_A          109 VLLAMP  114 (183)
T ss_dssp             EEECCS
T ss_pred             EEEeCC
Confidence            998765

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.95  E-value=0.0028  Score=54.76  Aligned_cols=76  Identities=18%  Similarity=0.165  Sum_probs=48.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC-hHHHHHHHHHHHh-cCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IASIKDFAQNFIA-LNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~-~~~~id   78 (288)
                      ||+|+ |++|...++.+...|++|+++++++++.+.+. ++     +.. .  ..|..+ .+..+++.+.... ...++|
T Consensus       173 lV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~-~--~~~~~~~~~~~~~i~~~~~~~~g~g~D  242 (352)
T 1e3j_A          173 LVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC-----GAD-V--TLVVDPAKEEESSIIERIRSAIGDLPN  242 (352)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCS-E--EEECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred             EEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh-----CCC-E--EEcCcccccHHHHHHHHhccccCCCCC
Confidence            58896 89999998888789999999999988766543 22     232 2  235553 3333333322210 123699


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.++|.
T Consensus       243 ~vid~~g~  250 (352)
T 1e3j_A          243 VTIDCSGN  250 (352)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.94  E-value=0.0023  Score=55.93  Aligned_cols=71  Identities=15%  Similarity=0.198  Sum_probs=51.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|+|+ |+||.++++.+...|++|++++|+.++++.+.+.+     +..+   ..+..+..++.+++.       ..|+|
T Consensus       172 ~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~---~~~~~~~~~l~~~l~-------~aDvV  235 (377)
T 2vhw_A          172 VVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRI---HTRYSSAYELEGAVK-------RADLV  235 (377)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSS---EEEECCHHHHHHHHH-------HCSEE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCee---EeccCCHHHHHHHHc-------CCCEE
Confidence            47887 99999999999999999999999998876654433     2222   234445555544443       57999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      |++++..
T Consensus       236 i~~~~~p  242 (377)
T 2vhw_A          236 IGAVLVP  242 (377)
T ss_dssp             EECCCCT
T ss_pred             EECCCcC
Confidence            9998854

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.93  E-value=0.0006  Score=50.94  Aligned_cols=67  Identities=15%  Similarity=0.236  Sum_probs=48.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|+ |++|+.+++.|.+.|++|++++|+.++.+++.+++     +.  ...  +..+.   .+.+.       ..|+|
T Consensus        25 ~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----~~--~~~--~~~~~---~~~~~-------~~Div   84 (144)
T 3oj0_A           25 LLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----EY--EYV--LINDI---DSLIK-------NNDVI   84 (144)
T ss_dssp             EEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----TC--EEE--ECSCH---HHHHH-------TCSEE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----CC--ceE--eecCH---HHHhc-------CCCEE
Confidence            36775 99999999999999999999999999887766655     21  111  23332   22232       57999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      |.+.+..
T Consensus        85 i~at~~~   91 (144)
T 3oj0_A           85 ITATSSK   91 (144)
T ss_dssp             EECSCCS
T ss_pred             EEeCCCC
Confidence            9998754

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.93  E-value=0.0067  Score=52.55  Aligned_cols=78  Identities=18%  Similarity=0.200  Sum_probs=52.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|+ |++|...++.+...|++ |+++++++++.+.+.+ +     ...+..+..|-.+.+++.+.+.++.. ..++|+
T Consensus       184 lV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-----~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g~Dv  255 (363)
T 3m6i_A          184 LICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-----CPEVVTHKVERLSAEESAKKIVESFG-GIEPAV  255 (363)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-----CTTCEEEECCSCCHHHHHHHHHHHTS-SCCCSE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-----chhcccccccccchHHHHHHHHHHhC-CCCCCE
Confidence            57888 99999988877789997 9999999887765443 3     12344445554455544443333321 236999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       256 vid~~g~  262 (363)
T 3m6i_A          256 ALECTGV  262 (363)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999884

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.89  E-value=0.014  Score=49.95  Aligned_cols=151  Identities=9%  Similarity=0.079  Sum_probs=88.8

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhh--CCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKE--DDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|+ |.+|.+++..|+.+|.  .|+++++++++++.....+...  ++.. ...+..  .|.+           .....
T Consensus        24 ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~-~~i~~~--~d~~-----------~~~~a   88 (331)
T 4aj2_A           24 VVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKT-PKIVSS--KDYS-----------VTANS   88 (331)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSC-CEEEEC--SSGG-----------GGTTE
T ss_pred             EECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCC-CeEEEc--CCHH-----------HhCCC
Confidence            6787 9999999999999997  8999999998888766666543  2211 122211  1211           12378


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |++|.+||....+    .+.-.+.+..|.--...+.+.+..+   .+     .+.++++|-+...+...       +...
T Consensus        89 DiVvi~aG~~~kp----G~tR~dL~~~N~~I~~~i~~~i~~~---~p-----~a~vlvvtNPvdi~t~~-------~~k~  149 (331)
T 4aj2_A           89 KLVIITAGARQQE----GESRLNLVQRNVNIFKFIIPNVVKY---SP-----QCKLLIVSNPVDILTYV-------AWKI  149 (331)
T ss_dssp             EEEEECCSCCCCT----TCCGGGGHHHHHHHHHHHHHHHHHH---CT-----TCEEEECSSSHHHHHHH-------HHHH
T ss_pred             CEEEEccCCCCCC----CccHHHHHHHHHHHHHHHHHHHHHH---CC-----CeEEEEecChHHHHHHH-------HHHH
Confidence            9999999975431    1223456666665555555555443   11     57888888765543210       0011


Q ss_pred             CCCCccccchh-hHHHHHHHHHHHHHHhcc
Q 023054          158 AGYSDKKAYGQ-SKLANILHANELSRRFQE  186 (288)
Q Consensus       158 ~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~  186 (288)
                      .++++....+. +-.=...+-..+++.++-
T Consensus       150 sg~p~~rviG~gt~LD~~R~~~~la~~lgv  179 (331)
T 4aj2_A          150 SGFPKNRVIGSGCNLDSARFRYLMGERLGV  179 (331)
T ss_dssp             HCCCGGGEEECTTHHHHHHHHHHHHHHHTS
T ss_pred             hCCCHHHEEeeccccHHHHHHHHHHHHhCC
Confidence            13455455555 333234455556666653

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.78  E-value=0.0037  Score=51.41  Aligned_cols=75  Identities=16%  Similarity=0.295  Sum_probs=54.1

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIA   61 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   61 (288)
                      |.| .||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+..+++. +
T Consensus        33 vvG-~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~~-~  110 (251)
T 1zud_1           33 IIG-LGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTG-E  110 (251)
T ss_dssp             EEC-CSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCCH-H
T ss_pred             EEc-cCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccCCH-H
Confidence            455 47899999999999997 788886542                   5677777888888777777777666653 3


Q ss_pred             HHHHHHHHHHhcCCCcceEEEccc
Q 023054           62 SIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        62 ~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      .+..++.       ..|+||.+..
T Consensus       111 ~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          111 ALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             HHHHHHH-------HCSEEEECCS
T ss_pred             HHHHHHh-------cCCEEEECCC
Confidence            4444433       4689987753

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.75  E-value=0.0086  Score=51.13  Aligned_cols=152  Identities=15%  Similarity=0.050  Sum_probs=87.7

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCC--CceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDT--ARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|+ |.+|.+++..|+..|.  +|+++++++++++.....+....|-  ..+.....|.              +.....
T Consensus        10 ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~--------------~a~~~a   74 (326)
T 3pqe_A           10 LIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY--------------EDCKDA   74 (326)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG--------------GGGTTC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH--------------HHhCCC
Confidence            6785 9999999999999987  8999999998887766666543221  2233332221              112368


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |++|.++|.....    .+.-.+.+..|..-...+.+.    +.+..    +.+.|+++|-+.......       +...
T Consensus        75 DvVvi~ag~p~kp----G~~R~dL~~~N~~Iv~~i~~~----I~~~~----p~a~vlvvtNPvd~~t~~-------~~k~  135 (326)
T 3pqe_A           75 DIVCICAGANQKP----GETRLELVEKNLKIFKGIVSE----VMASG----FDGIFLVATNPVDILTYA-------TWKF  135 (326)
T ss_dssp             SEEEECCSCCCCT----TCCHHHHHHHHHHHHHHHHHH----HHHTT----CCSEEEECSSSHHHHHHH-------HHHH
T ss_pred             CEEEEecccCCCC----CccHHHHHHHHHHHHHHHHHH----HHHhc----CCeEEEEcCChHHHHHHH-------HHHh
Confidence            9999999975321    112234455565444444444    43321    157888888766543210       0011


Q ss_pred             CCCCccccchh-hHHHHHHHHHHHHHHhccc
Q 023054          158 AGYSDKKAYGQ-SKLANILHANELSRRFQEE  187 (288)
Q Consensus       158 ~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~  187 (288)
                      .++++....+. +-.=-..+-..+++.++-.
T Consensus       136 ~g~p~~rviG~gt~LD~~R~~~~la~~lgv~  166 (326)
T 3pqe_A          136 SGLPKERVIGSGTTLDSARFRFMLSEYFGAA  166 (326)
T ss_dssp             HCCCGGGEEECTTHHHHHHHHHHHHHHHTCC
T ss_pred             cCCCHHHEEeeccccHHHHHHHHHHHHhCCC
Confidence            23555555554 3332344556667766643

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.70  E-value=0.0021  Score=54.95  Aligned_cols=73  Identities=16%  Similarity=0.219  Sum_probs=46.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|++|...++.+...|++|+++++++++.+.+. ++     +... +  +|..+.+  ...+.++  ..+++|++
T Consensus       154 lV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~-~--i~~~~~~--~~~~~~~--~~~~~d~v  220 (328)
T 1xa0_A          154 LVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKE-V--LAREDVM--AERIRPL--DKQRWAAA  220 (328)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSE-E--EECC-----------C--CSCCEEEE
T ss_pred             EEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc-----CCcE-E--EecCCcH--HHHHHHh--cCCcccEE
Confidence            58999999999999888889999999999877665443 22     2221 2  3555432  1222222  12469999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |.++|.
T Consensus       221 id~~g~  226 (328)
T 1xa0_A          221 VDPVGG  226 (328)
T ss_dssp             EECSTT
T ss_pred             EECCcH
Confidence            999983

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.67  E-value=0.0017  Score=55.96  Aligned_cols=72  Identities=17%  Similarity=0.221  Sum_probs=48.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|| |++|...++.+...|+ +|+++++++++.+.+.+ +     ..    ...|..+.+ +.+.+.++.  ..++|+
T Consensus       169 lV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-----a~----~v~~~~~~~-~~~~~~~~~--~~g~D~  234 (343)
T 2dq4_A          169 LITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-----AD----RLVNPLEED-LLEVVRRVT--GSGVEV  234 (343)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-----CS----EEECTTTSC-HHHHHHHHH--SSCEEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-----HH----hccCcCccC-HHHHHHHhc--CCCCCE
Confidence            58999 9999999988888999 89999999876543321 1     11    124655533 333333332  347999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       235 vid~~g~  241 (343)
T 2dq4_A          235 LLEFSGN  241 (343)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999984

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.61  E-value=0.0038  Score=54.40  Aligned_cols=71  Identities=21%  Similarity=0.347  Sum_probs=47.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|+||..+++.+...|++|+++++ +++.+.+ +++     +.. .  .+|..+.+..+.    +.+ ..++|++
T Consensus       188 lV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~l-----Ga~-~--v~~~~~~~~~~~----~~~-~~g~D~v  252 (375)
T 2vn8_A          188 LILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKL-----GAD-D--VIDYKSGSVEEQ----LKS-LKPFDFI  252 (375)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHT-----TCS-E--EEETTSSCHHHH----HHT-SCCBSEE
T ss_pred             EEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHc-----CCC-E--EEECCchHHHHH----Hhh-cCCCCEE
Confidence            58999999999999888889999998884 4444332 222     222 1  236555443332    222 2579999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |.++|.
T Consensus       253 id~~g~  258 (375)
T 2vn8_A          253 LDNVGG  258 (375)
T ss_dssp             EESSCT
T ss_pred             EECCCC
Confidence            999984

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.48  E-value=0.0017  Score=54.84  Aligned_cols=82  Identities=10%  Similarity=0.064  Sum_probs=50.3

Q ss_pred             ChhHHHHHHHHHHCCCEEEEEeCChHHH--------HHHHHHHHhh-CCCCceEEEEecCCChHHHHHHHHHH-------
Q 023054            7 SGIGLETARVLALRKAHVIIAARNMAAA--------NEARQLILKE-DDTARVDTLKLDLSSIASIKDFAQNF-------   70 (288)
Q Consensus         7 ~gIG~~ia~~La~~G~~V~~~~r~~~~~--------~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~-------   70 (288)
                      |-.|.++|+.++++|+.|+++.+.....        ....+.+... ..+..+..+.+|+.+...+.+.+...       
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~  144 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAAG  144 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccccccceeeeccccHHHHHHHHHHHhhhhccc
Confidence            4599999999999999999998753210        0001111100 00123445666777666665555433       


Q ss_pred             -----------------------HhcCCCcceEEEccccCC
Q 023054           71 -----------------------IALNLPLNILINNAGIMF   88 (288)
Q Consensus        71 -----------------------~~~~~~id~lv~~ag~~~   88 (288)
                                             .+.++..|++|++|++..
T Consensus       145 ~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          145 TFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             CEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             cceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence                                   233567999999999864

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.47  E-value=0.0086  Score=51.47  Aligned_cols=153  Identities=13%  Similarity=0.048  Sum_probs=82.2

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhh-CCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKE-DDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|++|.+|..++..++.+|.  +|++++.++++++.....+... ++..++.+.    +|   ..+.+       ...|
T Consensus        13 ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t----~d---~~~al-------~dAD   78 (343)
T 3fi9_A           13 IVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFT----SD---IKEAL-------TDAK   78 (343)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEE----SC---HHHHH-------TTEE
T ss_pred             EECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEc----CC---HHHHh-------CCCC
Confidence            789999999999999999994  7999999998877655555543 222222211    12   11112       2689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCe-EEEEcCccccccccCCccccCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGR-IVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~-iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ++|.+||.....    .+.-.+.+..|..-...+.+.+..+-   +     .+. |+++|-+...+.+..       ...
T Consensus        79 vVvitaG~p~kp----G~~R~dLl~~N~~I~~~i~~~i~~~~---p-----~a~~vlvvsNPvd~~t~i~-------~k~  139 (343)
T 3fi9_A           79 YIVSSGGAPRKE----GMTREDLLKGNAEIAAQLGKDIKSYC---P-----DCKHVIIIFNPADITGLVT-------LIY  139 (343)
T ss_dssp             EEEECCC-----------CHHHHHHHHHHHHHHHHHHHHHHC---T-----TCCEEEECSSSHHHHHHHH-------HHH
T ss_pred             EEEEccCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHhc---c-----CcEEEEEecCchHHHHHHH-------HHH
Confidence            999999975321    12233455666554444444443332   1     454 677777654332100       001


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhccc
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEE  187 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  187 (288)
                      .++++....+.+-.=-..|-..++++++-.
T Consensus       140 sg~p~~rv~g~t~LDs~R~~~~la~~l~v~  169 (343)
T 3fi9_A          140 SGLKPSQVTTLAGLDSTRLQSELAKHFGIK  169 (343)
T ss_dssp             HTCCGGGEEEECCHHHHHHHHHHHHHHTSC
T ss_pred             cCCCcceEEEecCcHHHHHHHHHHHHhCcC
Confidence            123333333443322234556667776643

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.42  E-value=0.0048  Score=51.15  Aligned_cols=39  Identities=15%  Similarity=0.158  Sum_probs=34.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI   41 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~   41 (288)
                      +|.|+ ||.|++++..|++.|.+|++++|+.++++++. ++
T Consensus       122 lvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          122 LILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             EEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            46775 99999999999999999999999999888776 44

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.39  E-value=0.056  Score=46.08  Aligned_cols=158  Identities=8%  Similarity=-0.001  Sum_probs=88.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhh--CCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKE--DDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|+ |.+|..++..|+..|.  .|++++++++.++.....+...  ++...-.....|..+              ....
T Consensus        26 ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~--------------~~da   90 (330)
T 3ldh_A           26 VVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV--------------SAGS   90 (330)
T ss_dssp             EEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS--------------CSSC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH--------------hCCC
Confidence            6788 9999999999999997  8999999998877666555543  111111111223332              3378


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |++|.+||....+-    +.-.+.+..|..-.-.+.+.+.++   .+     .+.++++|-+...+....       ...
T Consensus        91 DiVIitaG~p~kpG----~tR~dll~~N~~I~k~i~~~I~k~---~P-----~a~ilvvtNPvdi~t~~~-------~k~  151 (330)
T 3ldh_A           91 KLVVITAGARQQEG----ESRLNLVQRNVNIFKFIIPNIVKH---SP-----DCLKELHPELGTDKNKQD-------WKL  151 (330)
T ss_dssp             SEEEECCSCCCCSS----CCTTGGGHHHHHHHHHHHHHHHHH---CT-----TCEEEECSSSHHHHHHHH-------HHH
T ss_pred             CEEEEeCCCCCCCC----CCHHHHHHhhHHHHHHHHHHHHhh---CC-----CceEEeCCCccHHHHHHH-------HHH
Confidence            99999999764321    222345555554444444444333   11     578888887654432100       011


Q ss_pred             CCCCccccchh-hHHHHHHHHHHHHHHhcccCCceEE
Q 023054          158 AGYSDKKAYGQ-SKLANILHANELSRRFQEEGVNITA  193 (288)
Q Consensus       158 ~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~~~~i~v  193 (288)
                      .++++....+. +-.=-..+-..+++.++-.-..|+.
T Consensus       152 sg~p~~rViG~gt~LDs~R~~~~lA~~lgv~~~~V~~  188 (330)
T 3ldh_A          152 SGLPMHRIIGSGCNLDSARFRYLMGERLGVHSCLVIG  188 (330)
T ss_dssp             HCCCGGGEECCTTHHHHHHHHHHHHHHHTSCTTTCCE
T ss_pred             hCCCHHHeecccCchhHHHHHHHHHHHhCCCHHHeEE
Confidence            13444444444 2222234455567766644323444

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.36  E-value=0.039  Score=47.41  Aligned_cols=162  Identities=11%  Similarity=-0.006  Sum_probs=84.9

Q ss_pred             cccCCChhHHHHHHHHHHCCC-------EEEEEeCChH--HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh
Q 023054            2 LAGGASGIGLETARVLALRKA-------HVIIAARNMA--AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA   72 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   72 (288)
                      |+||+|+||..++..|+....       .+++.+.++.  .++-...++...........+..  ++.   ..       
T Consensus        29 ViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~---~~-------   96 (345)
T 4h7p_A           29 VTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP---RV-------   96 (345)
T ss_dssp             EESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH---HH-------
T ss_pred             EECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh---HH-------
Confidence            899999999999999987643       6999998763  34444445544321222222222  121   11       


Q ss_pred             cCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           73 LNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      .+.+.|++|..||....+    ...-++.++.|..-.-    .+.+.+.+...   +...|+++|-+.-.+.+..   ++
T Consensus        97 a~~~advVvi~aG~prkp----GmtR~DLl~~Na~I~~----~~~~~i~~~a~---~~~~vlvvsNPvd~~~~i~---~~  162 (345)
T 4h7p_A           97 AFDGVAIAIMCGAFPRKA----GMERKDLLEMNARIFK----EQGEAIAAVAA---SDCRVVVVGNPANTNALIL---LK  162 (345)
T ss_dssp             HTTTCSEEEECCCCCCCT----TCCHHHHHHHHHHHHH----HHHHHHHHHSC---TTCEEEECSSSHHHHHHHH---HH
T ss_pred             HhCCCCEEEECCCCCCCC----CCCHHHHHHHhHHHHH----HHHHHHHhhcc---CceEEEEeCCCcchHHHHH---HH
Confidence            134789999999986532    1233556676655444    44444433210   0346666766532221000   00


Q ss_pred             CCCCCCC-CCccccchhhHHHHHHHHHHHHHHhcccCCceE
Q 023054          153 KINDRAG-YSDKKAYGQSKLANILHANELSRRFQEEGVNIT  192 (288)
Q Consensus       153 ~~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~  192 (288)
                         ...+ +++....+.+-.=-..+-..++++++-.-..|+
T Consensus       163 ---~~~g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~  200 (345)
T 4h7p_A          163 ---SAQGKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVR  200 (345)
T ss_dssp             ---HTTTCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEE
T ss_pred             ---HccCCCCcceeeeccchhHHHHHHHHHHHHCcChhhee
Confidence               0011 233344455544444556667777765433354

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.30  E-value=0.005  Score=48.94  Aligned_cols=40  Identities=23%  Similarity=0.287  Sum_probs=35.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQL   40 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~   40 (288)
                      +|+||+|.+|.++++.|+++|++|++++|+++..++..+.
T Consensus         4 ~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            4 ALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             EEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            3789999999999999999999999999998877765544

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.29  E-value=0.014  Score=50.66  Aligned_cols=73  Identities=14%  Similarity=0.196  Sum_probs=48.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+| +|+||...++.+...|++|+++++++++.+.+ +++     +.. .+  +| .+.+++.+.+.++.. ..++|++
T Consensus       194 lV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~-~v--i~-~~~~~~~~~v~~~~~-g~g~D~v  261 (363)
T 3uog_A          194 VVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GAD-HG--IN-RLEEDWVERVYALTG-DRGADHI  261 (363)
T ss_dssp             EEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS-EE--EE-TTTSCHHHHHHHHHT-TCCEEEE
T ss_pred             EEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCC-EE--Ec-CCcccHHHHHHHHhC-CCCceEE
Confidence            5788 89999999988888999999999998877653 333     332 12  35 332333333333322 2269999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |.++|
T Consensus       262 id~~g  266 (363)
T 3uog_A          262 LEIAG  266 (363)
T ss_dssp             EEETT
T ss_pred             EECCC
Confidence            99998

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.28  E-value=0.028  Score=47.20  Aligned_cols=151  Identities=13%  Similarity=0.081  Sum_probs=83.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhC--CCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKED--DTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|+ |.+|.+++..|+..|.  +|++++++++.++.....+....  ......+...  +|.+           ....-
T Consensus         5 ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~~~a   70 (294)
T 1oju_A            5 FVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LLKGS   70 (294)
T ss_dssp             EECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GGTTC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH-----------HhCCC
Confidence            6788 9999999999999997  89999999988764333333321  0112222211  1211           12367


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |++|..+|.....-    ..-.+.+..|.    .+++.+.+.+.+..    +.+.|+++|-+.-.+...       +...
T Consensus        71 DiVViaag~~~kpG----~~R~dl~~~N~----~i~~~i~~~i~~~~----p~a~iivvsNPvd~~t~~-------~~k~  131 (294)
T 1oju_A           71 EIIVVTAGLARKPG----MTRLDLAHKNA----GIIKDIAKKIVENA----PESKILVVTNPMDVMTYI-------MWKE  131 (294)
T ss_dssp             SEEEECCCCCCCSS----CCHHHHHHHHH----HHHHHHHHHHHTTS----TTCEEEECSSSHHHHHHH-------HHHH
T ss_pred             CEEEECCCCCCCCC----CcHHHHHHHHH----HHHHHHHHHHHhhC----CCeEEEEeCCcchHHHHH-------HHHh
Confidence            99999999753211    12233445453    34444555544431    157888888765443200       0011


Q ss_pred             CCCCccccchh-hHHHHHHHHHHHHHHhcc
Q 023054          158 AGYSDKKAYGQ-SKLANILHANELSRRFQE  186 (288)
Q Consensus       158 ~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~  186 (288)
                      .++++....+. +-.=-..+-..++ +++-
T Consensus       132 ~g~p~~rviG~gt~LD~~R~~~~la-~l~v  160 (294)
T 1oju_A          132 SGKPRNEVFGMGNQLDSQRLKERLY-NAGA  160 (294)
T ss_dssp             SCCCTTSEEECSHHHHHHHHHHHHH-HTTC
T ss_pred             cCCCHHHEeecccccHHHHHHHHHH-HhCC
Confidence            24555555665 2333334555566 6553

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.26  E-value=0.011  Score=50.40  Aligned_cols=152  Identities=11%  Similarity=0.104  Sum_probs=81.4

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCC-CceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDT-ARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|+ |.+|.+++..|+..|.  +|+++++++++++.....+....+- ..+.....|   .           +.....|
T Consensus        14 ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~-----------~a~~~aD   78 (326)
T 3vku_A           14 LVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y-----------SDAKDAD   78 (326)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G-----------GGGTTCS
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H-----------HHhcCCC
Confidence            6786 9999999999999887  8999999998888766666553221 123332211   1           1234789


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|+.||....+-    +.-.+.++.|.--.    +.+.+.+.+..    +.+.++++|-+...+...       +....
T Consensus        79 iVvi~ag~~~kpG----~tR~dL~~~N~~I~----~~i~~~i~~~~----p~a~ilvvtNPvdi~t~~-------~~k~~  139 (326)
T 3vku_A           79 LVVITAGAPQKPG----ETRLDLVNKNLKIL----KSIVDPIVDSG----FNGIFLVAANPVDILTYA-------TWKLS  139 (326)
T ss_dssp             EEEECCCCC--------------------CH----HHHHHHHHTTT----CCSEEEECSSSHHHHHHH-------HHHHH
T ss_pred             EEEECCCCCCCCC----chHHHHHHHHHHHH----HHHHHHHHhcC----CceEEEEccCchHHHHHH-------HHHhc
Confidence            9999999753211    11233455554433    33334443321    157888888765443210       00112


Q ss_pred             CCCccccchh-hHHHHHHHHHHHHHHhccc
Q 023054          159 GYSDKKAYGQ-SKLANILHANELSRRFQEE  187 (288)
Q Consensus       159 ~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~  187 (288)
                      ++++....+. +-.=-..+-..+++.++-.
T Consensus       140 g~p~~rviG~gt~LD~~R~~~~la~~lgv~  169 (326)
T 3vku_A          140 GFPKNRVVGSGTSLDTARFRQSIAKMVNVD  169 (326)
T ss_dssp             CCCGGGEEECTTHHHHHHHHHHHHHHHTSC
T ss_pred             CCCHHHeeeecccCcHHHHHHHHHHHhCCC
Confidence            3555555554 4333345566677776643

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.20  E-value=0.0097  Score=51.54  Aligned_cols=81  Identities=15%  Similarity=0.155  Sum_probs=46.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh--HHHHHHHHHHHh-cCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI--ASIKDFAQNFIA-LNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~-~~~~i   77 (288)
                      ||+||+|++|...++.+...|++|++++++.++.++..+.+++.  +.. .++  |..+.  +++.+.+.++.. ...++
T Consensus       172 lV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l--Ga~-~vi--~~~~~~~~~~~~~i~~~t~~~~~g~  246 (364)
T 1gu7_A          172 IQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GAT-QVI--TEDQNNSREFGPTIKEWIKQSGGEA  246 (364)
T ss_dssp             EESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCS-EEE--EHHHHHCGGGHHHHHHHHHHHTCCE
T ss_pred             EECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc--CCe-EEE--ecCccchHHHHHHHHHHhhccCCCc
Confidence            58999999999988877778999999887655422222222222  322 122  32220  112222222220 12479


Q ss_pred             ceEEEcccc
Q 023054           78 NILINNAGI   86 (288)
Q Consensus        78 d~lv~~ag~   86 (288)
                      |++|.++|.
T Consensus       247 Dvvid~~G~  255 (364)
T 1gu7_A          247 KLALNCVGG  255 (364)
T ss_dssp             EEEEESSCH
T ss_pred             eEEEECCCc
Confidence            999999883

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.14  E-value=0.015  Score=51.21  Aligned_cols=66  Identities=17%  Similarity=0.298  Sum_probs=47.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|+ |++|+.+++.|...|+ +|++++|+.+++++....+     +..  .  .+.   +++.+++       ...|+
T Consensus       171 lIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~-----g~~--~--~~~---~~l~~~l-------~~aDv  230 (404)
T 1gpj_A          171 LVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--A--VRF---DELVDHL-------ARSDV  230 (404)
T ss_dssp             EEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--E--CCG---GGHHHHH-------HTCSE
T ss_pred             EEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCc--e--ecH---HhHHHHh-------cCCCE
Confidence            46786 9999999999999998 8999999998876666554     222  1  222   2233332       26899


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      ||.+.+.
T Consensus       231 Vi~at~~  237 (404)
T 1gpj_A          231 VVSATAA  237 (404)
T ss_dssp             EEECCSS
T ss_pred             EEEccCC
Confidence            9999864

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.13  E-value=0.049  Score=46.21  Aligned_cols=158  Identities=20%  Similarity=0.154  Sum_probs=87.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCC--hHHHHHHHHHHHhhC----CCCceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARN--MAAANEARQLILKED----DTARVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~--~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      |+|+ |.+|..++..|+..|. +|++++++  ++..+.....+....    ...++..- -|   .           +..
T Consensus        13 ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d---~-----------~a~   76 (315)
T 3tl2_A           13 VIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SD---Y-----------ADT   76 (315)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G-----------GGG
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CC---H-----------HHh
Confidence            6786 9999999999999999 99999999  555544333333221    12222221 12   1           122


Q ss_pred             CCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           75 LPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      ...|++|.++|....+-    ..-.+.+..|..-.-.+.+.+..+   .+     .+.|+++|-+...+.+.-       
T Consensus        77 ~~aDvVIiaag~p~kpg----~~R~dl~~~N~~i~~~i~~~i~~~---~p-----~a~vlvvsNPvd~~t~~~-------  137 (315)
T 3tl2_A           77 ADSDVVVITAGIARKPG----MSRDDLVATNSKIMKSITRDIAKH---SP-----NAIIVVLTNPVDAMTYSV-------  137 (315)
T ss_dssp             TTCSEEEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHH---CT-----TCEEEECCSSHHHHHHHH-------
T ss_pred             CCCCEEEEeCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHh---CC-----CeEEEECCChHHHHHHHH-------
Confidence            47899999999754321    223445555654444444444333   11     578888887654432110       


Q ss_pred             CCCCCCCccccchh-hHHHHHHHHHHHHHHhcccCCceEEE
Q 023054          155 NDRAGYSDKKAYGQ-SKLANILHANELSRRFQEEGVNITAN  194 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~~~~i~v~  194 (288)
                      ....++++....+. +-.=-..+-..+++.++-....|+..
T Consensus       138 ~k~sg~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~  178 (315)
T 3tl2_A          138 FKEAGFPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGF  178 (315)
T ss_dssp             HHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECC
T ss_pred             HHhcCCChHHEEeeccCcHHHHHHHHHHHHhCcCHHHceee
Confidence            01123555555566 33333455666777766432235543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.08  E-value=0.015  Score=49.81  Aligned_cols=71  Identities=15%  Similarity=0.080  Sum_probs=49.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+|+ |+||...++.+...|++|+++++++++.+.+.+ +     +...   ..|..+.+..+.+.+    ..+++|++
T Consensus       171 lV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---~i~~~~~~~~~~~~~----~~g~~d~v  236 (340)
T 3s2e_A          171 VISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-L-----GAEV---AVNARDTDPAAWLQK----EIGGAHGV  236 (340)
T ss_dssp             EEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSE---EEETTTSCHHHHHHH----HHSSEEEE
T ss_pred             EEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-c-----CCCE---EEeCCCcCHHHHHHH----hCCCCCEE
Confidence            57786 899999888888899999999999887764322 2     2222   246665444444433    23479999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |.++|
T Consensus       237 id~~g  241 (340)
T 3s2e_A          237 LVTAV  241 (340)
T ss_dssp             EESSC
T ss_pred             EEeCC
Confidence            99987

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.05  E-value=0.03  Score=47.69  Aligned_cols=151  Identities=17%  Similarity=0.142  Sum_probs=82.8

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhC----CCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKED----DTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |+|+ |.+|.+++..|+..|. +|+++++++++++.....+....    ...++.. ..|   .+           ....
T Consensus        12 viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~-----------a~~~   75 (324)
T 3gvi_A           12 LIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YA-----------AIEG   75 (324)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GG-----------GGTT
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HH-----------HHCC
Confidence            6787 9999999999999998 99999999887764444444321    1222222 112   11           1236


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      .|++|..+|.....- .   .-.+.+..|..    +.+.+.+.+.+..    +.+.|+++|-+...+....       ..
T Consensus        76 aDiVIiaag~p~k~G-~---~R~dl~~~N~~----i~~~i~~~i~~~~----p~a~iivvtNPvd~~t~~~-------~k  136 (324)
T 3gvi_A           76 ADVVIVTAGVPRKPG-M---SRDDLLGINLK----VMEQVGAGIKKYA----PEAFVICITNPLDAMVWAL-------QK  136 (324)
T ss_dssp             CSEEEECCSCCCC---------CHHHHHHHH----HHHHHHHHHHHHC----TTCEEEECCSSHHHHHHHH-------HH
T ss_pred             CCEEEEccCcCCCCC-C---CHHHHHHhhHH----HHHHHHHHHHHHC----CCeEEEecCCCcHHHHHHH-------HH
Confidence            899999999753321 1   12234554544    3444444444322    1578888887665442100       01


Q ss_pred             CCCCCccccchhhH-HHHHHHHHHHHHHhccc
Q 023054          157 RAGYSDKKAYGQSK-LANILHANELSRRFQEE  187 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK-~a~~~~~~~la~~~~~~  187 (288)
                      ..++++....+.+- .=-..+...+++.++-.
T Consensus       137 ~sg~p~~rviG~~~~LD~~R~~~~la~~lgv~  168 (324)
T 3gvi_A          137 FSGLPAHKVVGMAGVLDSARFRYFLSEEFNVS  168 (324)
T ss_dssp             HHCCCGGGEEECCHHHHHHHHHHHHHHHHTCC
T ss_pred             hcCCCHHHEEeecCccHHHHHHHHHHHHhCcC
Confidence            12345445555541 11233455566666643

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.05  E-value=0.016  Score=50.29  Aligned_cols=72  Identities=19%  Similarity=0.277  Sum_probs=46.9

Q ss_pred             CcccCCChhHHHHHHHHHH-CCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc-CCCcc
Q 023054            1 MLAGGASGIGLETARVLAL-RKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL-NLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~id   78 (288)
                      ||+||+|++|...++.+.. .|++|+++++++++.+.+.+ +     +.. .+  .|..+ +    +.+.+.+. .+++|
T Consensus       176 lV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-l-----Gad-~v--i~~~~-~----~~~~v~~~~~~g~D  241 (363)
T 4dvj_A          176 LIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-L-----GAH-HV--IDHSK-P----LAAEVAALGLGAPA  241 (363)
T ss_dssp             EEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-T-----TCS-EE--ECTTS-C----HHHHHHTTCSCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-c-----CCC-EE--EeCCC-C----HHHHHHHhcCCCce
Confidence            5899999999987665544 58999999999887665432 2     222 12  34443 2    22333332 34799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      +++.++|.
T Consensus       242 vvid~~g~  249 (363)
T 4dvj_A          242 FVFSTTHT  249 (363)
T ss_dssp             EEEECSCH
T ss_pred             EEEECCCc
Confidence            99999884

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.02  E-value=0.0091  Score=51.61  Aligned_cols=74  Identities=18%  Similarity=0.337  Sum_probs=55.2

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIA   61 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   61 (288)
                      |.| .||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+...+|..++..+..+++...
T Consensus       123 vvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~  201 (353)
T 3h5n_A          123 ILG-CGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYT  201 (353)
T ss_dssp             EEC-CSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGG
T ss_pred             EEC-CCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecccCchh
Confidence            444 58999999999999997 799988753                   356667777777788888888888887654


Q ss_pred             HHHHHHHHHHhcCCCcceEEEcc
Q 023054           62 SIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        62 ~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      .+.       + ....|+||.+.
T Consensus       202 ~~~-------~-~~~~DlVvd~~  216 (353)
T 3h5n_A          202 DLH-------K-VPEADIWVVSA  216 (353)
T ss_dssp             GGG-------G-SCCCSEEEECC
T ss_pred             hhh-------H-hccCCEEEEec
Confidence            222       2 34788888765

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=95.99  E-value=0.037  Score=48.24  Aligned_cols=75  Identities=19%  Similarity=0.182  Sum_probs=48.3

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCC--ChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS--SIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~~~~~~~~~i   77 (288)
                      ||+| +|++|...++.+...| ++|+++++++++.+.+. ++     +.. .+  +|..  +.+++.+.+.++.. ..++
T Consensus       200 lV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~~~~~~~~~v~~~~~-g~g~  268 (380)
T 1vj0_A          200 VIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GAD-LT--LNRRETSVEERRKAIMDITH-GRGA  268 (380)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCS-EE--EETTTSCHHHHHHHHHHHTT-TSCE
T ss_pred             EEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-----CCc-EE--EeccccCcchHHHHHHHHhC-CCCC
Confidence            5889 8999999988887899 59999999988766543 22     222 22  3443  13333322222211 1269


Q ss_pred             ceEEEcccc
Q 023054           78 NILINNAGI   86 (288)
Q Consensus        78 d~lv~~ag~   86 (288)
                      |++|.++|.
T Consensus       269 Dvvid~~g~  277 (380)
T 1vj0_A          269 DFILEATGD  277 (380)
T ss_dssp             EEEEECSSC
T ss_pred             cEEEECCCC
Confidence            999999984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.99  E-value=0.005  Score=49.86  Aligned_cols=68  Identities=15%  Similarity=0.120  Sum_probs=51.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|+ |.+|..+++.|.++|+ |++++++++..+...     .    .+.++..|.++.+.++++      ...+.|.+
T Consensus        13 iI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a------~i~~ad~v   75 (234)
T 2aef_A           13 VICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKA------NVRGARAV   75 (234)
T ss_dssp             EEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHT------TCTTCSEE
T ss_pred             EEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhc------CcchhcEE
Confidence            46776 8999999999999999 999999987765432     1    267889999998765543      12367888


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |.+.+
T Consensus        76 i~~~~   80 (234)
T 2aef_A           76 IVDLE   80 (234)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            87654

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=95.95  E-value=0.021  Score=49.80  Aligned_cols=75  Identities=13%  Similarity=0.157  Sum_probs=50.0

Q ss_pred             Cccc-CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAG-GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItG-as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||.| |+|++|...++.+...|++|+.+++++++.+.+.+ +     +...   .+|..+.+..+.+.+....  .++|+
T Consensus       175 lV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~---~~~~~~~~~~~~v~~~t~~--~g~d~  243 (379)
T 3iup_A          175 LVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-Q-----GAVH---VCNAASPTFMQDLTEALVS--TGATI  243 (379)
T ss_dssp             EEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-T-----TCSC---EEETTSTTHHHHHHHHHHH--HCCCE
T ss_pred             EEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-C-----CCcE---EEeCCChHHHHHHHHHhcC--CCceE
Confidence            4666 89999999888887889999999999887665432 2     2221   2355554433333332211  26999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.+.|.
T Consensus       244 v~d~~g~  250 (379)
T 3iup_A          244 AFDATGG  250 (379)
T ss_dssp             EEESCEE
T ss_pred             EEECCCc
Confidence            9999984

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=95.93  E-value=0.025  Score=48.86  Aligned_cols=73  Identities=16%  Similarity=0.157  Sum_probs=49.0

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|| |++|...++.+... |++|+++++++++.+.+. ++     +.. +  .+|..+.  +.+.+.++.. ..++|+
T Consensus       191 lV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~-~--vi~~~~~--~~~~v~~~~~-g~g~Dv  257 (359)
T 1h2b_A          191 AIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GAD-H--VVDARRD--PVKQVMELTR-GRGVNV  257 (359)
T ss_dssp             EEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCS-E--EEETTSC--HHHHHHHHTT-TCCEEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCC-E--EEeccch--HHHHHHHHhC-CCCCcE
Confidence            58899 89999988877778 999999999988766543 22     222 1  2365554  3333333321 126999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       258 vid~~G~  264 (359)
T 1h2b_A          258 AMDFVGS  264 (359)
T ss_dssp             EEESSCC
T ss_pred             EEECCCC
Confidence            9999984

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=95.89  E-value=0.043  Score=47.33  Aligned_cols=74  Identities=22%  Similarity=0.251  Sum_probs=47.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCC--ChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS--SIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~~~~~~~~~i   77 (288)
                      ||+|+ |+||...++.+...|+ +|+++++++++.+.+. ++     +.. .+  +|..  +.++..+.+.+...  .++
T Consensus       176 lV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~~~~~~~~~i~~~~~--~g~  243 (356)
T 1pl8_A          176 LVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LV--LQISKESPQEIARKVEGQLG--CKP  243 (356)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EE--EECSSCCHHHHHHHHHHHHT--SCC
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-EE--EcCcccccchHHHHHHHHhC--CCC
Confidence            57886 8999998887777899 8999999988765433 22     232 22  3544  22222222222222  479


Q ss_pred             ceEEEcccc
Q 023054           78 NILINNAGI   86 (288)
Q Consensus        78 d~lv~~ag~   86 (288)
                      |++|.++|.
T Consensus       244 D~vid~~g~  252 (356)
T 1pl8_A          244 EVTIECTGA  252 (356)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999883

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.85  E-value=0.063  Score=45.44  Aligned_cols=156  Identities=14%  Similarity=0.090  Sum_probs=85.5

Q ss_pred             cccCCChhHHHHHHHHHHC-C--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALR-K--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+||+|.+|..++..|+.+ +  .+|+++++++ ..+.....+...  ...+.....--++  .    .+.+    .+.|
T Consensus         5 IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~~~~~v~~~~~~~--~----~~~~----~~aD   71 (312)
T 3hhp_A            5 VLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--PTAVKIKGFSGED--A----TPAL----EGAD   71 (312)
T ss_dssp             EETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--CSSEEEEEECSSC--C----HHHH----TTCS
T ss_pred             EECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--CCCceEEEecCCC--c----HHHh----CCCC
Confidence            7899999999999999876 5  4799999987 333333344332  1222222110011  1    1111    2689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|..||....+    ...-.+.++.|..-...+.+.+..+-   +     ++.|+++|-+...+.+....    .....
T Consensus        72 ivii~ag~~rkp----G~~R~dll~~N~~I~~~i~~~i~~~~---p-----~a~vlvvtNPvd~~t~~a~~----~~k~s  135 (312)
T 3hhp_A           72 VVLISAGVARKP----GMDRSDLFNVNAGIVKNLVQQVAKTC---P-----KACIGIITNPVNTTVAIAAE----VLKKA  135 (312)
T ss_dssp             EEEECCSCSCCT----TCCHHHHHHHHHHHHHHHHHHHHHHC---T-----TSEEEECSSCHHHHHHHHHH----HHHHT
T ss_pred             EEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHC---C-----CcEEEEecCcchhHHHHHHH----HHHHc
Confidence            999999975421    12345566767655555555554431   1     56888888765443211000    00111


Q ss_pred             CC-CccccchhhHHHHHHHHHHHHHHhcc
Q 023054          159 GY-SDKKAYGQSKLANILHANELSRRFQE  186 (288)
Q Consensus       159 ~~-~~~~~Y~~sK~a~~~~~~~la~~~~~  186 (288)
                      +. ++....+.+-.=-..+-..+++.++.
T Consensus       136 g~~p~~rv~G~~~LD~~R~~~~la~~lgv  164 (312)
T 3hhp_A          136 GVYDKNKLFGVTTLDIIRSNTFVAELKGK  164 (312)
T ss_dssp             TCCCTTSEEECCHHHHHHHHHHHHHHHTC
T ss_pred             CCCCcceEEEEechhHHHHHHHHHHHhCc
Confidence            23 55555666622234456667777664

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=95.83  E-value=0.019  Score=49.86  Aligned_cols=76  Identities=25%  Similarity=0.313  Sum_probs=48.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +.. .  ..|..+.+..+.+.+......+++|+
T Consensus       187 lV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~-~--vi~~~~~~~~~~i~~~~~~~~gg~Dv  256 (370)
T 4ej6_A          187 AILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV-----GAT-A--TVDPSAGDVVEAIAGPVGLVPGGVDV  256 (370)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCS-E--EECTTSSCHHHHHHSTTSSSTTCEEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCC-E--EECCCCcCHHHHHHhhhhccCCCCCE
Confidence            57887 8999998888778999 899999988776533 333     332 1  23655544333222110012347999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       257 vid~~G~  263 (370)
T 4ej6_A          257 VIECAGV  263 (370)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999874

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.78  E-value=0.034  Score=47.52  Aligned_cols=53  Identities=17%  Similarity=0.173  Sum_probs=42.5

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDL   57 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl   57 (288)
                      |.||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+..++
T Consensus        41 GaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~i  113 (340)
T 3rui_A           41 GAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI  113 (340)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence            568999999999999997 788887653                   46777778888888877777776655

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.75  E-value=0.022  Score=49.42  Aligned_cols=69  Identities=14%  Similarity=0.225  Sum_probs=48.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+|+ |+||...++.+...|++|+++++++++.+.+.+ +     +.. .  .+|..+.+.+++    +   .+++|++
T Consensus       199 lV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l-----Ga~-~--vi~~~~~~~~~~----~---~~g~Dvv  261 (369)
T 1uuf_A          199 GVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L-----GAD-E--VVNSRNADEMAA----H---LKSFDFI  261 (369)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCS-E--EEETTCHHHHHT----T---TTCEEEE
T ss_pred             EEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCc-E--EeccccHHHHHH----h---hcCCCEE
Confidence            57887 899999888877899999999999887765432 3     322 1  246665443222    2   1479999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |.++|.
T Consensus       262 id~~g~  267 (369)
T 1uuf_A          262 LNTVAA  267 (369)
T ss_dssp             EECCSS
T ss_pred             EECCCC
Confidence            999985

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.70  E-value=0.12  Score=43.58  Aligned_cols=158  Identities=16%  Similarity=0.114  Sum_probs=89.0

Q ss_pred             cccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|| |.+|..++..|+..+  ..|++.++++++++.....+....+ ...+.+.. |  +.+.           ....|
T Consensus         5 IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~~~aD   69 (310)
T 2xxj_A            5 IVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------LEGAR   69 (310)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------GTTEE
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------hCCCC
Confidence            7898 999999999999987  4899999999888766666654321 11223322 2  2221           23789


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||..+|..... ..+   -...+..|.-    .++.+.+.+.+..    +.+.|+++|-+........       ....
T Consensus        70 ~Vii~ag~~~~~-g~~---r~dl~~~n~~----i~~~i~~~i~~~~----p~a~iiv~tNPv~~~t~~~-------~k~s  130 (310)
T 2xxj_A           70 AVVLAAGVAQRP-GET---RLQLLDRNAQ----VFAQVVPRVLEAA----PEAVLLVATNPVDVMTQVA-------YALS  130 (310)
T ss_dssp             EEEECCCCCCCT-TCC---HHHHHHHHHH----HHHHHHHHHHHHC----TTCEEEECSSSHHHHHHHH-------HHHH
T ss_pred             EEEECCCCCCCC-CcC---HHHHHHhhHH----HHHHHHHHHHHHC----CCcEEEEecCchHHHHHHH-------HHHc
Confidence            999999975432 111   1233343433    3444444444321    1578888877655432100       0111


Q ss_pred             CCCccccchh-hHHHHHHHHHHHHHHhcccCCceEE
Q 023054          159 GYSDKKAYGQ-SKLANILHANELSRRFQEEGVNITA  193 (288)
Q Consensus       159 ~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~~~~i~v  193 (288)
                      ++++....+. +-.-...+-..+++.++-....|+.
T Consensus       131 ~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~  166 (310)
T 2xxj_A          131 GLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHA  166 (310)
T ss_dssp             TCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEE
T ss_pred             CCCHHHEEecCcchhHHHHHHHHHHHhCcCHHHeEE
Confidence            3555555565 4433455666677776643222554

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.70  E-value=0.03  Score=46.99  Aligned_cols=114  Identities=13%  Similarity=0.042  Sum_probs=69.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC--CCceEEEE-ecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD--TARVDTLK-LDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |+|| |+||..++..|+.++.  ++++++.+++..+-....+....+  +....... .|..+              ...
T Consensus         5 IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~--------------~~~   69 (294)
T 2x0j_A            5 FVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL--------------LKG   69 (294)
T ss_dssp             EECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGG--------------GTT
T ss_pred             EECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHH--------------hCC
Confidence            6785 9999999999998875  799999998776655555544211  12222222 23221              236


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ  142 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  142 (288)
                      -|++|..||....+-    ..-.+.++.|..    +.+.+.+.+.+..    +++.|+++|-+.-.
T Consensus        70 aDvVvitAG~prkpG----mtR~dLl~~Na~----I~~~i~~~i~~~~----p~aivlvvsNPvd~  123 (294)
T 2x0j_A           70 SEIIVVTAGLARKPG----MTRLDLAHKNAG----IIKDIAKKIVENA----PESKILVVTNPMDV  123 (294)
T ss_dssp             CSEEEECCCCCCCSS----SCHHHHHHHHHH----HHHHHHHHHHTTS----TTCEEEECSSSHHH
T ss_pred             CCEEEEecCCCCCCC----CchHHHHHHHHH----HHHHHHHHHHhcC----CceEEEEecCcchh
Confidence            799999999765321    234556666655    4444444444432    14677777765433

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=95.69  E-value=0.011  Score=51.26  Aligned_cols=69  Identities=13%  Similarity=0.137  Sum_probs=47.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-HHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-ASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|+ |+||...++.+...|++|+++++++++.+.+.+ +     +.. .+  .|..+. +..    +.+.   +++|+
T Consensus       184 lV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~-~v--~~~~~~~~~~----~~~~---~~~D~  246 (360)
T 1piw_A          184 GIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GAD-HY--IATLEEGDWG----EKYF---DTFDL  246 (360)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCS-EE--EEGGGTSCHH----HHSC---SCEEE
T ss_pred             EEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c-----CCC-EE--EcCcCchHHH----HHhh---cCCCE
Confidence            58999 999999888887889999999998877665432 3     222 12  344433 222    2221   47999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       247 vid~~g~  253 (360)
T 1piw_A          247 IVVCASS  253 (360)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999985

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.67  E-value=0.016  Score=49.20  Aligned_cols=38  Identities=13%  Similarity=0.228  Sum_probs=33.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      ||+||+|++|...++.+...|++|+.+++++++.+.+.
T Consensus       151 lV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          151 VVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             EEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            58999999999988888889999999999988766543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=95.65  E-value=0.021  Score=49.66  Aligned_cols=74  Identities=15%  Similarity=0.156  Sum_probs=48.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC-hHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id   78 (288)
                      ||+|+ |+||...++.+...|+ +|+++++++++.+.+. ++     +.. .+  +|..+ .+++.+.+.++..  +++|
T Consensus       197 lV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~~~~~~~~~~~~~~--~g~D  264 (374)
T 1cdo_A          197 AVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GAT-DF--VNPNDHSEPISQVLSKMTN--GGVD  264 (374)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCC-EE--ECGGGCSSCHHHHHHHHHT--SCBS
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCc-eE--EeccccchhHHHHHHHHhC--CCCC
Confidence            57885 9999998888878999 8999999988766543 22     222 12  35443 1223333333332  4799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.++|.
T Consensus       265 ~vid~~g~  272 (374)
T 1cdo_A          265 FSLECVGN  272 (374)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999984

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=95.59  E-value=0.022  Score=48.39  Aligned_cols=69  Identities=17%  Similarity=0.264  Sum_probs=45.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|++|...++.+...|++|+.++++. +. +..+++     +...   ..|..+.+.+.       +...++|++
T Consensus       157 lV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~l-----Ga~~---~i~~~~~~~~~-------~~~~g~D~v  219 (321)
T 3tqh_A          157 LIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKAL-----GAEQ---CINYHEEDFLL-------AISTPVDAV  219 (321)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHH-----TCSE---EEETTTSCHHH-------HCCSCEEEE
T ss_pred             EEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHc-----CCCE---EEeCCCcchhh-------hhccCCCEE
Confidence            5899999999999988888999999887543 33 333333     2321   23555544222       122479999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      +.+.|.
T Consensus       220 ~d~~g~  225 (321)
T 3tqh_A          220 IDLVGG  225 (321)
T ss_dssp             EESSCH
T ss_pred             EECCCc
Confidence            999883

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.58  E-value=0.059  Score=45.66  Aligned_cols=161  Identities=11%  Similarity=0.109  Sum_probs=87.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|+ |.+|..++..|+..|.  .|+++++++++++.....+....+  .....+...|  +.           +.....
T Consensus         5 ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-----------~a~~~a   70 (314)
T 3nep_X            5 VIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-----------GPTEDS   70 (314)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-----------GGGTTC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-----------HHhCCC
Confidence            6786 9999999999999887  899999998876654444443210  1122222122  11           112368


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |++|.++|....+-    ..-.+.+..|..-    ++.+.+.+.+..    +.+.|+++|-+...+...-       ...
T Consensus        71 DvVii~ag~~~kpG----~~R~dl~~~N~~i----~~~i~~~i~~~~----p~a~vivvtNPvd~~t~~~-------~k~  131 (314)
T 3nep_X           71 DVCIITAGLPRSPG----MSRDDLLAKNTEI----VGGVTEQFVEGS----PDSTIIVVANPLDVMTYVA-------YEA  131 (314)
T ss_dssp             SEEEECCCC-----------CHHHHHHHHHH----HHHHHHHHHTTC----TTCEEEECCSSHHHHHHHH-------HHH
T ss_pred             CEEEECCCCCCCCC----CCHHHHHHhhHHH----HHHHHHHHHHhC----CCcEEEecCCchhHHHHHH-------HHh
Confidence            99999999753321    1223455555443    444444444321    1578888887665442110       011


Q ss_pred             CCCCccccchhh-HHHHHHHHHHHHHHhcccCCceEEEE
Q 023054          158 AGYSDKKAYGQS-KLANILHANELSRRFQEEGVNITANS  195 (288)
Q Consensus       158 ~~~~~~~~Y~~s-K~a~~~~~~~la~~~~~~~~~i~v~~  195 (288)
                      .++++....|.+ -.=-..+-..+++.++-.-..|+...
T Consensus       132 ~g~p~~rviG~~t~LD~~R~~~~la~~lgv~~~~v~~~V  170 (314)
T 3nep_X          132 SGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALL  170 (314)
T ss_dssp             HTCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred             cCCChHHEEeecCchHHHHHHHHHHHHhCcCHHHeEEEE
Confidence            235555556665 33234555666777664322355443

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=95.56  E-value=0.044  Score=48.17  Aligned_cols=74  Identities=20%  Similarity=0.344  Sum_probs=48.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +.. .  ..|..+.+..+.+.+ +. ...++|+
T Consensus       218 lV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~-~--vi~~~~~~~~~~i~~-~t-~g~g~D~  285 (404)
T 3ip1_A          218 VILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL-----GAD-H--VIDPTKENFVEAVLD-YT-NGLGAKL  285 (404)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCS-E--EECTTTSCHHHHHHH-HT-TTCCCSE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCC-E--EEcCCCCCHHHHHHH-Hh-CCCCCCE
Confidence            58898 8999998887778999 899999998876644 333     322 1  235555443333322 21 1126999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       286 vid~~g~  292 (404)
T 3ip1_A          286 FLEATGV  292 (404)
T ss_dssp             EEECSSC
T ss_pred             EEECCCC
Confidence            9999984

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=95.54  E-value=0.068  Score=45.75  Aligned_cols=72  Identities=15%  Similarity=0.215  Sum_probs=47.4

Q ss_pred             CcccCCChhHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR--KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      ||+|+ |+||...++.+...  |++|+++++++++.+.+. ++     +.. .+  .|..+.   ....+++.+ ..++|
T Consensus       175 lV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~---~~~~~~~~~-g~g~D  240 (344)
T 2h6e_A          175 IVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL-----GAD-YV--SEMKDA---ESLINKLTD-GLGAS  240 (344)
T ss_dssp             EEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH-----TCS-EE--ECHHHH---HHHHHHHHT-TCCEE
T ss_pred             EEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh-----CCC-EE--eccccc---hHHHHHhhc-CCCcc
Confidence            58999 89999988877778  999999999988766543 23     222 12  233220   122333332 23799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.++|.
T Consensus       241 ~vid~~g~  248 (344)
T 2h6e_A          241 IAIDLVGT  248 (344)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999984

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.51  E-value=0.067  Score=45.49  Aligned_cols=153  Identities=13%  Similarity=0.097  Sum_probs=83.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+| +|.+|.+++..|+..|. +|+++++++++++.....+....+  .....+...  .+.+           .....|
T Consensus        10 iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~-----------a~~~aD   75 (321)
T 3p7m_A           10 LVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK-----------DLENSD   75 (321)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG-----------GGTTCS
T ss_pred             EEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH-----------HHCCCC
Confidence            678 59999999999999888 999999998877655555543210  111222211  1211           123689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|..+|....+-    ..-.+.+..|..-...+.    +.+.+..    +.+.++++|-+...+...       +....
T Consensus        76 vVIi~ag~p~k~G----~~R~dl~~~N~~i~~~i~----~~i~~~~----p~a~vivvtNPvd~~t~~-------~~k~s  136 (321)
T 3p7m_A           76 VVIVTAGVPRKPG----MSRDDLLGINIKVMQTVG----EGIKHNC----PNAFVICITNPLDIMVNM-------LQKFS  136 (321)
T ss_dssp             EEEECCSCCCCTT----CCHHHHHHHHHHHHHHHH----HHHHHHC----TTCEEEECCSSHHHHHHH-------HHHHH
T ss_pred             EEEEcCCcCCCCC----CCHHHHHHHhHHHHHHHH----HHHHHHC----CCcEEEEecCchHHHHHH-------HHHhc
Confidence            9999999753321    122344555544444444    4443322    157888887765443210       00112


Q ss_pred             CCCccccchhh-HHHHHHHHHHHHHHhccc
Q 023054          159 GYSDKKAYGQS-KLANILHANELSRRFQEE  187 (288)
Q Consensus       159 ~~~~~~~Y~~s-K~a~~~~~~~la~~~~~~  187 (288)
                      ++++....|.+ -.=-..+-..+++.++-.
T Consensus       137 g~p~~rviG~~~~LD~~R~~~~la~~l~v~  166 (321)
T 3p7m_A          137 GVPDNKIVGMAGVLDSARFRTFLADELNVS  166 (321)
T ss_dssp             CCCGGGEEEECHHHHHHHHHHHHHHHHTCC
T ss_pred             CCCHHHEEeeccchHHHHHHHHHHHHhCcC
Confidence            34545555554 111234456667766543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.51  E-value=0.082  Score=44.56  Aligned_cols=114  Identities=15%  Similarity=0.075  Sum_probs=61.3

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|| |.+|..++..|+..|.  +|+++++++++++.....+....+ .....+..   .+.+           .....|
T Consensus         5 VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~-----------a~~~aD   69 (304)
T 2v6b_A            5 VVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS-----------ELADAQ   69 (304)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG-----------GGTTCS
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH-----------HhCCCC
Confidence            6887 9999999999999998  999999998877654444433211 01112211   1211           123689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ  142 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  142 (288)
                      +||.++|.....- .+   -.+.+..|..-...+.+.+.++   .+     ++.|+++|-+...
T Consensus        70 vVIi~~~~~~~~g-~~---r~dl~~~n~~i~~~i~~~i~~~---~p-----~~~vi~~tNP~~~  121 (304)
T 2v6b_A           70 VVILTAGANQKPG-ES---RLDLLEKNADIFRELVPQITRA---AP-----DAVLLVTSNPVDL  121 (304)
T ss_dssp             EEEECC----------------CHHHHHHHHHHHHHHHHHH---CS-----SSEEEECSSSHHH
T ss_pred             EEEEcCCCCCCCC-Cc---HHHHHHhHHHHHHHHHHHHHHh---CC-----CeEEEEecCchHH
Confidence            9999998653211 11   1233444444444444444443   11     4566666555443

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=95.49  E-value=0.026  Score=48.78  Aligned_cols=70  Identities=20%  Similarity=0.176  Sum_probs=47.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+|+ |+||...++.+...|++|+++++++++.+.+.+++     +... +  .|..+.+.+       .+..+++|++
T Consensus       185 lV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~-v--i~~~~~~~~-------~~~~~g~D~v  248 (357)
T 2cf5_A          185 GILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-----GADD-Y--VIGSDQAKM-------SELADSLDYV  248 (357)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-----CCSC-E--EETTCHHHH-------HHSTTTEEEE
T ss_pred             EEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-----CCce-e--eccccHHHH-------HHhcCCCCEE
Confidence            57885 99999998887778999999999887765443222     2221 1  355553322       2223479999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |.++|.
T Consensus       249 id~~g~  254 (357)
T 2cf5_A          249 IDTVPV  254 (357)
T ss_dssp             EECCCS
T ss_pred             EECCCC
Confidence            999984

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.47  E-value=0.046  Score=47.45  Aligned_cols=73  Identities=12%  Similarity=0.121  Sum_probs=47.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|++|...++.+...|++|+.+. ++++.+. .+++     +.. .  .+|..+.+..+.+ .++  ..+++|++
T Consensus       169 lV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~-~~~l-----Ga~-~--vi~~~~~~~~~~v-~~~--t~g~~d~v  235 (371)
T 3gqv_A          169 LVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL-AKSR-----GAE-E--VFDYRAPNLAQTI-RTY--TKNNLRYA  235 (371)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHHT-----TCS-E--EEETTSTTHHHHH-HHH--TTTCCCEE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH-HHHc-----CCc-E--EEECCCchHHHHH-HHH--ccCCccEE
Confidence            5899999999998888888999998886 5555442 2222     222 2  2366554433332 222  12469999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |.++|.
T Consensus       236 ~d~~g~  241 (371)
T 3gqv_A          236 LDCITN  241 (371)
T ss_dssp             EESSCS
T ss_pred             EECCCc
Confidence            999984

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.44  E-value=0.026  Score=49.86  Aligned_cols=37  Identities=19%  Similarity=0.276  Sum_probs=31.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      +|.|. |.+|..+++.|.++|..|++++++++..+...
T Consensus         8 iIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~   44 (413)
T 3l9w_A            8 IIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR   44 (413)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred             EEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            35664 88999999999999999999999998876654

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.40  E-value=0.048  Score=50.13  Aligned_cols=53  Identities=17%  Similarity=0.173  Sum_probs=43.5

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDL   57 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl   57 (288)
                      |.||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+..++
T Consensus       333 GaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~I  405 (615)
T 4gsl_A          333 GAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI  405 (615)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeeccc
Confidence            568999999999999997 799988754                   46777888888888888888877655

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=95.35  E-value=0.027  Score=48.92  Aligned_cols=74  Identities=15%  Similarity=0.142  Sum_probs=48.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC-hHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id   78 (288)
                      ||+|+ |+||...++.+...|+ +|+++++++++.+.+. ++     +.. .+  +|..+ .+++.+.+.++..  +++|
T Consensus       196 lV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~~~~~~~~~~~~~~--~g~D  263 (374)
T 2jhf_A          196 AVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV-----GAT-EC--VNPQDYKKPIQEVLTEMSN--GGVD  263 (374)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCS-EE--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCc-eE--ecccccchhHHHHHHHHhC--CCCc
Confidence            57884 9999998888888999 8999999988766542 22     222 12  35443 1223333333322  4799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.++|.
T Consensus       264 ~vid~~g~  271 (374)
T 2jhf_A          264 FSFEVIGR  271 (374)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999984

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.25  E-value=0.11  Score=44.04  Aligned_cols=151  Identities=13%  Similarity=0.111  Sum_probs=83.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|| |.+|..++..|+.+|.  .|+++++++++++.....+....+  +..+.+.. |  +.+           ...+.
T Consensus        11 IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~-----------a~~~a   75 (317)
T 3d0o_A           11 LIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYS-----------DCHDA   75 (317)
T ss_dssp             EECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGG-----------GGTTC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHH-----------HhCCC
Confidence            7888 9999999999999884  899999998777654444433211  12233332 2  211           12368


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |++|..+|.....-    ..-...+..|.-    .++.+.+.+.+..    +.+.|+++|-+......       -+...
T Consensus        76 DvVvi~ag~~~~~g----~~r~dl~~~n~~----i~~~i~~~i~~~~----p~a~viv~tNPv~~~t~-------~~~k~  136 (317)
T 3d0o_A           76 DLVVICAGAAQKPG----ETRLDLVSKNLK----IFKSIVGEVMASK----FDGIFLVATNPVDILAY-------ATWKF  136 (317)
T ss_dssp             SEEEECCCCCCCTT----CCHHHHHHHHHH----HHHHHHHHHHHTT----CCSEEEECSSSHHHHHH-------HHHHH
T ss_pred             CEEEECCCCCCCCC----CcHHHHHHHHHH----HHHHHHHHHHHhC----CCcEEEEecCcHHHHHH-------HHHHH
Confidence            99999999753221    112233333333    4444444444422    15778887765544320       00011


Q ss_pred             CCCCccccchh-hHHHHHHHHHHHHHHhcc
Q 023054          158 AGYSDKKAYGQ-SKLANILHANELSRRFQE  186 (288)
Q Consensus       158 ~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~  186 (288)
                      .++++....+. +-.-...+-..+++.++-
T Consensus       137 ~~~p~~rviG~gt~lD~~r~~~~la~~l~v  166 (317)
T 3d0o_A          137 SGLPKERVIGSGTILDSARFRLLLSEAFDV  166 (317)
T ss_dssp             HCCCGGGEEECTTHHHHHHHHHHHHHHHTS
T ss_pred             hCCCHHHEEecCccccHHHHHHHHHHHhCc
Confidence            13455555555 333345556667777664

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=95.24  E-value=0.032  Score=48.39  Aligned_cols=74  Identities=15%  Similarity=0.149  Sum_probs=48.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-HHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-ASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id   78 (288)
                      ||+|+ |+||...++.+...|+ +|+++++++++.+.+. ++     +.. .+  .|..+. +++.+.+.++..  +++|
T Consensus       195 lV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~~~~~~~~v~~~~~--~g~D  262 (373)
T 2fzw_A          195 AVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GAT-EC--INPQDFSKPIQEVLIEMTD--GGVD  262 (373)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCS-EE--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc-eE--eccccccccHHHHHHHHhC--CCCC
Confidence            57885 9999998887777899 8999999888766543 33     222 12  344431 223333333322  4799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.++|.
T Consensus       263 ~vid~~g~  270 (373)
T 2fzw_A          263 YSFECIGN  270 (373)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCc
Confidence            99999984

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=95.24  E-value=0.019  Score=50.01  Aligned_cols=74  Identities=12%  Similarity=0.101  Sum_probs=48.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC-hHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id   78 (288)
                      ||+|+ |+||...++.+...|+ +|+++++++++++.+. ++     +.. .  .+|..+ .+++.+.+.++.  .+++|
T Consensus       198 lV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~--vi~~~~~~~~~~~~i~~~~--~gg~D  265 (378)
T 3uko_A          198 AIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK-KF-----GVN-E--FVNPKDHDKPIQEVIVDLT--DGGVD  265 (378)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH-TT-----TCC-E--EECGGGCSSCHHHHHHHHT--TSCBS
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc-E--EEccccCchhHHHHHHHhc--CCCCC
Confidence            57888 9999998888878899 7999999988766432 22     222 1  234442 223333333332  23799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.++|.
T Consensus       266 ~vid~~g~  273 (378)
T 3uko_A          266 YSFECIGN  273 (378)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999984

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.23  E-value=0.42  Score=40.51  Aligned_cols=155  Identities=12%  Similarity=0.092  Sum_probs=82.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhh----CCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKE----DDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |+|| |.+|..++..|+..|. +|+++++++++++.....+...    ....++... .|+   +           ....
T Consensus         9 VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~-----------al~~   72 (322)
T 1t2d_A            9 LVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTY---D-----------DLAG   72 (322)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCG---G-----------GGTT
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CCH---H-----------HhCC
Confidence            6787 9999999999999998 9999999988777555544431    112222221 221   1           1236


Q ss_pred             cceEEEccccCCCCCCCCCC-cchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           77 LNILINNAGIMFCPYQISED-GIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      .|+||.++|..........+ .-...+..|.-    +.+.+.+.+.+..    +.+.++++|-+.......       ..
T Consensus        73 aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~----i~~~i~~~i~~~~----p~a~iiv~tNP~~~~t~~-------~~  137 (322)
T 1t2d_A           73 ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNK----IMIEIGGHIKKNC----PNAFIIVVTNPVDVMVQL-------LH  137 (322)
T ss_dssp             CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHH----HHHHHHHHHHHHC----TTSEEEECSSSHHHHHHH-------HH
T ss_pred             CCEEEEeCCCCCCCCCCcccccHHHHHHHHHH----HHHHHHHHHHHHC----CCeEEEEecCChHHHHHH-------HH
Confidence            89999999975432111011 01222333333    4444444443321    146777776655443100       00


Q ss_pred             CCCCCCccccchhh-HHHHHHHHHHHHHHhccc
Q 023054          156 DRAGYSDKKAYGQS-KLANILHANELSRRFQEE  187 (288)
Q Consensus       156 ~~~~~~~~~~Y~~s-K~a~~~~~~~la~~~~~~  187 (288)
                      ...++++....|.. -.-...+-..+++.++-.
T Consensus       138 ~~~g~~~~rviG~gt~ld~~R~~~~la~~lgv~  170 (322)
T 1t2d_A          138 QHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVC  170 (322)
T ss_dssp             HHHCCCGGGEEECCHHHHHHHHHHHHHHHHTSC
T ss_pred             HhcCCChHHEEeccCcccHHHHHHHHHHHhCCC
Confidence            11134455555653 222223667777777643

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.21  E-value=0.21  Score=41.49  Aligned_cols=39  Identities=21%  Similarity=0.167  Sum_probs=33.2

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI   41 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~   41 (288)
                      |.| +|.+|.++|..|++.|++|++++++++.+++..+.+
T Consensus         9 VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            9 VLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             EEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            445 588999999999999999999999998887766653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.18  E-value=0.025  Score=48.86  Aligned_cols=70  Identities=14%  Similarity=0.225  Sum_probs=46.5

Q ss_pred             CcccCCChhHHHH-HHHH-HHCCCE-EEEEeCChH---HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            1 MLAGGASGIGLET-ARVL-ALRKAH-VIIAARNMA---AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         1 lItGas~gIG~~i-a~~L-a~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      ||+|| |+||... ++.+ ...|++ |+.++++++   +.+.+. ++     +.  ..+  |..+.+ +.+ +.++   .
T Consensus       177 lV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l-----Ga--~~v--~~~~~~-~~~-i~~~---~  240 (357)
T 2b5w_A          177 FVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL-----DA--TYV--DSRQTP-VED-VPDV---Y  240 (357)
T ss_dssp             EEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT-----TC--EEE--ETTTSC-GGG-HHHH---S
T ss_pred             EEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc-----CC--ccc--CCCccC-HHH-HHHh---C
Confidence            58999 9999998 6666 567997 999999877   655432 22     22  223  655433 222 3333   2


Q ss_pred             CCcceEEEcccc
Q 023054           75 LPLNILINNAGI   86 (288)
Q Consensus        75 ~~id~lv~~ag~   86 (288)
                      +++|++|.++|.
T Consensus       241 gg~Dvvid~~g~  252 (357)
T 2b5w_A          241 EQMDFIYEATGF  252 (357)
T ss_dssp             CCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999883

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.17  E-value=0.17  Score=42.85  Aligned_cols=152  Identities=14%  Similarity=0.140  Sum_probs=84.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|| |.+|..++..|+..+.  .|+++++++++++.....+....+ ...+.+.. |  +.+           .....|
T Consensus        10 IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~-----------a~~~aD   74 (318)
T 1ez4_A           10 LVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYS-----------DCKDAD   74 (318)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGG-----------GGTTCS
T ss_pred             EECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHH-----------HhCCCC
Confidence            7898 9999999999998886  899999999888866666654321 12233322 2  211           123789


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||..+|.....- .+   -.+.+..|.-    +++.+.+.+.+..    +.+.|+++|-+......       -+....
T Consensus        75 vVii~ag~~~~~g-~~---R~dl~~~n~~----i~~~i~~~i~~~~----p~a~iiv~tNPv~~~t~-------~~~k~s  135 (318)
T 1ez4_A           75 LVVITAGAPQKPG-ES---RLDLVNKNLN----ILSSIVKPVVDSG----FDGIFLVAANPVDILTY-------ATWKFS  135 (318)
T ss_dssp             EEEECCCC--------------CHHHHHH----HHHHHHHHHHHTT----CCSEEEECSSSHHHHHH-------HHHHHH
T ss_pred             EEEECCCCCCCCC-CC---HHHHHHHHHH----HHHHHHHHHHHhC----CCeEEEEeCCcHHHHHH-------HHHHHc
Confidence            9999999754321 11   1223333433    4444444444432    16788888776554320       000111


Q ss_pred             CCCccccchh-hHHHHHHHHHHHHHHhccc
Q 023054          159 GYSDKKAYGQ-SKLANILHANELSRRFQEE  187 (288)
Q Consensus       159 ~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~  187 (288)
                      ++++....+. +-.--..+-..+++.++-.
T Consensus       136 ~~p~~rviG~gt~LD~~R~~~~la~~lgv~  165 (318)
T 1ez4_A          136 GFPKERVIGSGTSLDSSRLRVALGKQFNVD  165 (318)
T ss_dssp             CCCGGGEEECTTHHHHHHHHHHHHHHHTCC
T ss_pred             CCCHHHEEeccccchHHHHHHHHHHHhCcC
Confidence            3455555555 4333455666677777643

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.16  E-value=0.34  Score=40.99  Aligned_cols=151  Identities=13%  Similarity=0.093  Sum_probs=83.0

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCC--CceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDT--ARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|+ |.+|..++..|+..|.  +|++++++++.++.....+....+.  ..+.+.. |  +.           +.....
T Consensus        11 IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~al~~a   75 (316)
T 1ldn_A           11 VIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------DDCRDA   75 (316)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------GGTTTC
T ss_pred             EECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------HHhCCC
Confidence            7888 9999999999998875  7999999987666544444443221  1233332 1  21           113368


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |+||.++|...... .+.   .+.+..|    ..+.+.+.+.+.+..    +.+.++++|-+.......       +...
T Consensus        76 DvViia~~~~~~~g-~~r---~dl~~~n----~~i~~~i~~~i~~~~----p~a~~iv~tNPv~~~~~~-------~~~~  136 (316)
T 1ldn_A           76 DLVVICAGANQKPG-ETR---LDLVDKN----IAIFRSIVESVMASG----FQGLFLVATNPVDILTYA-------TWKF  136 (316)
T ss_dssp             SEEEECCSCCCCTT-TCS---GGGHHHH----HHHHHHHHHHHHHHT----CCSEEEECSSSHHHHHHH-------HHHH
T ss_pred             CEEEEcCCCCCCCC-CCH---HHHHHcC----hHHHHHHHHHHHHHC----CCCEEEEeCCchHHHHHH-------HHHH
Confidence            99999998764321 111   2334444    334444555444432    146677766654443200       0011


Q ss_pred             CCCCccccchh-hHHHHHHHHHHHHHHhcc
Q 023054          158 AGYSDKKAYGQ-SKLANILHANELSRRFQE  186 (288)
Q Consensus       158 ~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~  186 (288)
                      .++++....|. +-.-...+-..+++.++-
T Consensus       137 s~~p~~rviG~gt~lD~~r~~~~la~~l~v  166 (316)
T 1ldn_A          137 SGLPHERVIGSGTILDTARFRFLLGEYFSV  166 (316)
T ss_dssp             HTCCGGGEEECTTHHHHHHHHHHHHHHHTS
T ss_pred             hCCCHHHEEecccchHHHHHHHHHHHHhCC
Confidence            13444455555 333345556666777664

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=95.16  E-value=0.016  Score=49.81  Aligned_cols=64  Identities=20%  Similarity=0.208  Sum_probs=44.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+|+ |+||...++.+...|++|+++++++++.+.+.+ +     +....+     ++.+.+.+          ++|++
T Consensus       181 lV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~v~-----~~~~~~~~----------~~D~v  238 (348)
T 3two_A          181 GVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-M-----GVKHFY-----TDPKQCKE----------ELDFI  238 (348)
T ss_dssp             EEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-T-----TCSEEE-----SSGGGCCS----------CEEEE
T ss_pred             EEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-c-----CCCeec-----CCHHHHhc----------CCCEE
Confidence            57887 999999888888899999999998887664432 2     332222     33332211          79999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |.++|.
T Consensus       239 id~~g~  244 (348)
T 3two_A          239 ISTIPT  244 (348)
T ss_dssp             EECCCS
T ss_pred             EECCCc
Confidence            999884

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=95.14  E-value=0.039  Score=47.93  Aligned_cols=74  Identities=19%  Similarity=0.223  Sum_probs=48.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-HHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-ASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id   78 (288)
                      ||+|+ |+||...++.+...|+ +|+++++++++.+.+. ++     +.. .+  +|..+. +++.+.+.++..  +++|
T Consensus       200 lV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~~~~~~~~v~~~~~--~g~D  267 (376)
T 1e3i_A          200 AVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GAT-DC--LNPRELDKPVQDVITELTA--GGVD  267 (376)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCS-EE--ECGGGCSSCHHHHHHHHHT--SCBS
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCc-EE--EccccccchHHHHHHHHhC--CCcc
Confidence            57885 9999998887778899 8999999988766443 22     222 12  344431 223333333322  4799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.++|.
T Consensus       268 vvid~~G~  275 (376)
T 1e3i_A          268 YSLDCAGT  275 (376)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999984

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.13  E-value=0.14  Score=43.67  Aligned_cols=152  Identities=12%  Similarity=0.141  Sum_probs=85.3

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|| |.+|..++..|+..+.  .|+++++++++++.....+....+ ...+.+.. |  +.+.           ....|
T Consensus        14 IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a-----------~~~aD   78 (326)
T 2zqz_A           14 LVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD-----------AKDAD   78 (326)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------GGGCS
T ss_pred             EECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH-----------hCCCC
Confidence            7898 9999999999998885  899999999888776666654311 12233332 2  2111           23689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||..+|..... .   ..-...+..|.-    +++.+.+.+.+..    +.+.|+++|-+......       -+....
T Consensus        79 vVii~ag~~~k~-g---~~R~dl~~~n~~----i~~~i~~~i~~~~----p~a~iiv~tNPv~~~t~-------~~~k~s  139 (326)
T 2zqz_A           79 LVVITAGAPQKP-G---ETRLDLVNKNLK----ILKSIVDPIVDSG----FNGIFLVAANPVDILTY-------ATWKLS  139 (326)
T ss_dssp             EEEECCCCC---------CHHHHHHHHHH----HHHHHHHHHHHHT----CCSEEEECSSSHHHHHH-------HHHHHH
T ss_pred             EEEEcCCCCCCC-C---CCHHHHHHHHHH----HHHHHHHHHHHHC----CCeEEEEeCCcHHHHHH-------HHHHHc
Confidence            999999975321 1   112233334433    4444444444322    16788888776554321       000111


Q ss_pred             CCCccccchh-hHHHHHHHHHHHHHHhccc
Q 023054          159 GYSDKKAYGQ-SKLANILHANELSRRFQEE  187 (288)
Q Consensus       159 ~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~  187 (288)
                      ++++....|. +-.-...+-..+++.++-.
T Consensus       140 ~~p~~rviG~gt~LD~~R~~~~la~~lgv~  169 (326)
T 2zqz_A          140 GFPKNRVVGSGTSLDTARFRQSIAEMVNVD  169 (326)
T ss_dssp             CCCGGGEEECTTHHHHHHHHHHHHHHHTCC
T ss_pred             CCCHHHEEEccccchHHHHHHHHHHHhCCC
Confidence            3455555555 4333455666677776643

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.12  E-value=0.045  Score=50.25  Aligned_cols=53  Identities=17%  Similarity=0.168  Sum_probs=42.9

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHhhCCCCceEEEEecC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARN-------------------MAAANEARQLILKEDDTARVDTLKLDL   57 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl   57 (288)
                      |.||+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+.+.+|..++..+..++
T Consensus       334 GaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I  406 (598)
T 3vh1_A          334 GAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI  406 (598)
T ss_dssp             CCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEeccc
Confidence            578999999999999997 78898654                   257778888888888888888777664

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.06  E-value=0.22  Score=42.41  Aligned_cols=162  Identities=14%  Similarity=0.078  Sum_probs=83.4

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhh----CCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKE----DDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |.|| |.+|.+++..|+..|. +|++++++++.++.....+...    ....++.+.    +|.+   +.+       ..
T Consensus        14 VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~---ea~-------~~   78 (331)
T 1pzg_A           14 MIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSYE---AAL-------TG   78 (331)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSHH---HHH-------TT
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCHH---HHh-------CC
Confidence            6787 9999999999999998 9999999988777644433321    112223221    2322   112       26


Q ss_pred             cceEEEccccCCCCCC-CCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           77 LNILINNAGIMFCPYQ-ISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        77 id~lv~~ag~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      .|+||..+|....... .+.-.-...+..|..    +.+.+.+.+.+..    +.+.++++|-+.......       ..
T Consensus        79 aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~----i~~~i~~~i~~~~----p~a~vi~~tNP~~~~t~~-------~~  143 (331)
T 1pzg_A           79 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSK----IIREIGQNIKKYC----PKTFIIVVTNPLDCMVKV-------MC  143 (331)
T ss_dssp             CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHH----HHHHHHHHHHHHC----TTCEEEECCSSHHHHHHH-------HH
T ss_pred             CCEEEEccCCCCCCCcccCCCCHHHHHHHHHH----HHHHHHHHHHHHC----CCcEEEEEcCchHHHHHH-------HH
Confidence            7999999987543211 000011222333333    3444444443321    145666665555433100       00


Q ss_pred             CCCCCCccccchhh-HHHHHHHHHHHHHHhcccCCceEE
Q 023054          156 DRAGYSDKKAYGQS-KLANILHANELSRRFQEEGVNITA  193 (288)
Q Consensus       156 ~~~~~~~~~~Y~~s-K~a~~~~~~~la~~~~~~~~~i~v  193 (288)
                      ...++++....+.. -.-...+-..+++.++-....|++
T Consensus       144 ~~~~~~~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~  182 (331)
T 1pzg_A          144 EASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQA  182 (331)
T ss_dssp             HHHCCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEEC
T ss_pred             HhcCCChhcEEeccchHHHHHHHHHHHHHhCCCHHHceE
Confidence            11134455555553 332345566677777643222443

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.00  E-value=0.043  Score=50.91  Aligned_cols=73  Identities=21%  Similarity=0.242  Sum_probs=48.8

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |.||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+...+|..++..+..+++......
T Consensus        24 GaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~~i~~~~~~~  103 (640)
T 1y8q_B           24 GAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNV  103 (640)
T ss_dssp             CCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEESCTTSTTSCH
T ss_pred             CcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEecccchhhhhH
Confidence            459999999999999997 788887542                   245555666666677777777777765432111


Q ss_pred             HHHHHHHhcCCCcceEEEcc
Q 023054           65 DFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~a   84 (288)
                      .++       ...|+||.+.
T Consensus       104 ~~~-------~~~DlVvda~  116 (640)
T 1y8q_B          104 EFF-------RQFILVMNAL  116 (640)
T ss_dssp             HHH-------TTCSEEEECC
T ss_pred             hhh-------cCCCEEEECC
Confidence            222       2567777653

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.92  E-value=0.12  Score=43.00  Aligned_cols=38  Identities=11%  Similarity=0.164  Sum_probs=33.3

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQ   39 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~   39 (288)
                      |.|++|.+|.++++.|++.|++|++++|+++..+.+.+
T Consensus        16 iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           16 ILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             EETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            67888999999999999999999999999887766543

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=94.85  E-value=0.24  Score=41.80  Aligned_cols=157  Identities=17%  Similarity=0.197  Sum_probs=88.3

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhh----CCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKE----DDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |+|| |.+|..++..|+..|. .|++.++++++++.....+...    ....++... .|   .+           ....
T Consensus         4 IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~-----------a~~~   67 (308)
T 2d4a_B            4 ILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS-NS---YE-----------DMRG   67 (308)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GG-----------GGTT
T ss_pred             EECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC-CC---HH-----------HhCC
Confidence            7888 9999999999998887 6999999988776545544432    112223221 22   11           1236


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      .|+||..+|..... ..+   -...+..|    .-+.+.+.+.+.+..    +.+.|+++|-+...+...       +..
T Consensus        68 aD~Vi~~ag~~~k~-G~~---r~dl~~~n----~~i~~~i~~~i~~~~----p~a~iiv~tNPv~~~t~~-------~~k  128 (308)
T 2d4a_B           68 SDIVLVTAGIGRKP-GMT---REQLLEAN----ANTMADLAEKIKAYA----KDAIVVITTNPVDAMTYV-------MYK  128 (308)
T ss_dssp             CSEEEECCSCCCCS-SCC---THHHHHHH----HHHHHHHHHHHHHHC----TTCEEEECCSSHHHHHHH-------HHH
T ss_pred             CCEEEEeCCCCCCC-CCc---HHHHHHHH----HHHHHHHHHHHHHHC----CCeEEEEeCCchHHHHHH-------HHH
Confidence            89999999975432 111   12333333    334444555444421    157888877655443210       001


Q ss_pred             CCCCCccccchh-hHHHHHHHHHHHHHHhcccCCceEE
Q 023054          157 RAGYSDKKAYGQ-SKLANILHANELSRRFQEEGVNITA  193 (288)
Q Consensus       157 ~~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~~~~i~v  193 (288)
                      ..++++....|. +-.--..+-..+++.++-....|+.
T Consensus       129 ~~~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~  166 (308)
T 2d4a_B          129 KTGFPRERVIGFSGILDSARMAYYISQKLGVSFKSVNA  166 (308)
T ss_dssp             HHCCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEEC
T ss_pred             hcCCChhhEEEecccchHHHHHHHHHHHhCcChhHeEE
Confidence            123555566666 4444556667777777643222544

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=94.84  E-value=0.029  Score=46.75  Aligned_cols=37  Identities=19%  Similarity=0.242  Sum_probs=31.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEAR   38 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~   38 (288)
                      +|.|+ ||.|++++..|++.|+ +|++++|+.++++++.
T Consensus       126 lvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          126 VVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             EEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             EEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            46776 6999999999999998 8999999998876654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=94.83  E-value=0.062  Score=43.78  Aligned_cols=76  Identities=9%  Similarity=0.135  Sum_probs=53.7

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|++|.+|+.+++.+.+. ++.|+.+....+.+++..    ..  .  .. +.+|++.++.....+..+.+.  ++++
T Consensus         4 ~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~----~~--~--~D-vvIDfT~p~a~~~~~~~a~~~--g~~~   72 (245)
T 1p9l_A            4 GVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT----DG--N--TE-VVIDFTHPDVVMGNLEFLIDN--GIHA   72 (245)
T ss_dssp             EEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH----HT--T--CC-EEEECSCTTTHHHHHHHHHHT--TCEE
T ss_pred             EEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh----cc--C--Cc-EEEEccChHHHHHHHHHHHHc--CCCE
Confidence            37899999999999999875 888776554333233222    11  1  22 567999999998888877665  6888


Q ss_pred             EEEccccC
Q 023054           80 LINNAGIM   87 (288)
Q Consensus        80 lv~~ag~~   87 (288)
                      |+-..|..
T Consensus        73 VigTTG~~   80 (245)
T 1p9l_A           73 VVGTTGFT   80 (245)
T ss_dssp             EECCCCCC
T ss_pred             EEcCCCCC
Confidence            88888743

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=94.83  E-value=0.083  Score=45.73  Aligned_cols=73  Identities=12%  Similarity=0.176  Sum_probs=47.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|+ |+||...++.+...|+ +|+.+++++++.+.+. ++     +.. .+  .|..+.+..+.+ .++.  .+++|+
T Consensus       195 lV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~~~~~~~-~~~~--~gg~D~  261 (371)
T 1f8f_A          195 VTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GAT-HV--INSKTQDPVAAI-KEIT--DGGVNF  261 (371)
T ss_dssp             EEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TCS-EE--EETTTSCHHHHH-HHHT--TSCEEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCC-EE--ecCCccCHHHHH-HHhc--CCCCcE
Confidence            57885 9999998887777899 6999999988766543 33     222 12  355443323322 2221  237999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       262 vid~~g~  268 (371)
T 1f8f_A          262 ALESTGS  268 (371)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999983

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=94.79  E-value=0.14  Score=43.41  Aligned_cols=158  Identities=17%  Similarity=0.128  Sum_probs=82.2

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCC-CceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDT-ARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|+ |.+|..++..|+..|.  +|++++.++++++.....+....+- ..+.+. .  .+.           +.....|
T Consensus        12 IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~-----------~a~~~aD   76 (318)
T 1y6j_A           12 IIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY-----------SDVKDCD   76 (318)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GGGTTCS
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH-----------HHhCCCC
Confidence            6887 9999999999999987  8999999987766545555433110 122221 1  111           1134789


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      ++|.++|..... .   ..-.+.+..|......+.+.+.++   .+     ++.|+++|-+.......       +....
T Consensus        77 vVii~~g~p~k~-g---~~r~dl~~~n~~i~~~i~~~i~~~---~p-----~a~viv~tNPv~~~~~~-------~~k~s  137 (318)
T 1y6j_A           77 VIVVTAGANRKP-G---ETRLDLAKKNVMIAKEVTQNIMKY---YN-----HGVILVVSNPVDIITYM-------IQKWS  137 (318)
T ss_dssp             EEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHH---CC-----SCEEEECSSSHHHHHHH-------HHHHH
T ss_pred             EEEEcCCCCCCC-C---cCHHHHHHhhHHHHHHHHHHHHHh---CC-----CcEEEEecCcHHHHHHH-------HHHHc
Confidence            999999975321 1   112334555554444444444443   11     56777776655443200       00111


Q ss_pred             CCCccccchh-hHHHHHHHHHHHHHHhcccCCceEE
Q 023054          159 GYSDKKAYGQ-SKLANILHANELSRRFQEEGVNITA  193 (288)
Q Consensus       159 ~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~~~~i~v  193 (288)
                      ++++....+. +-.-...+-..+++.++-....|+.
T Consensus       138 ~~p~~rviG~gt~Ld~~r~~~~la~~lgv~~~~v~~  173 (318)
T 1y6j_A          138 GLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHG  173 (318)
T ss_dssp             TCCTTTEEECTTHHHHHHHHHHHHTTTTCCTTTEEC
T ss_pred             CCCHHHEeccCCchHHHHHHHHHHHHhCCCHHHeEE
Confidence            3444445555 4344455566667766643222443

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=94.79  E-value=0.057  Score=46.41  Aligned_cols=74  Identities=11%  Similarity=0.060  Sum_probs=47.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|+ |+||...++.+...|+ +|+++++++++.+.+ +++     +.. .  ..|..+.+..+.+.+ +. ...++|+
T Consensus       171 lV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~-~--vi~~~~~~~~~~v~~-~t-~g~g~D~  238 (352)
T 3fpc_A          171 CVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY-----GAT-D--IINYKNGDIVEQILK-AT-DGKGVDK  238 (352)
T ss_dssp             EEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH-----TCC-E--EECGGGSCHHHHHHH-HT-TTCCEEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh-----CCc-e--EEcCCCcCHHHHHHH-Hc-CCCCCCE
Confidence            57885 9999998887777899 799999998776543 333     332 2  234444333333222 11 1126999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       239 v~d~~g~  245 (352)
T 3fpc_A          239 VVIAGGD  245 (352)
T ss_dssp             EEECSSC
T ss_pred             EEECCCC
Confidence            9999885

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=94.71  E-value=0.091  Score=45.95  Aligned_cols=75  Identities=23%  Similarity=0.270  Sum_probs=48.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||.| +|+||...++.+...|+ +|+++++++++++.+. ++     +.  ..  +|.++.+.+.+.+.++.. ..++|+
T Consensus       190 lV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga--~~--i~~~~~~~~~~~v~~~t~-g~g~Dv  257 (398)
T 1kol_A          190 YVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-----GF--EI--ADLSLDTPLHEQIAALLG-EPEVDC  257 (398)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TC--EE--EETTSSSCHHHHHHHHHS-SSCEEE
T ss_pred             EEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-Hc-----CC--cE--EccCCcchHHHHHHHHhC-CCCCCE
Confidence            5788 49999998877777899 7999999988766543 22     33  22  465543322222222211 236999


Q ss_pred             EEEccccC
Q 023054           80 LINNAGIM   87 (288)
Q Consensus        80 lv~~ag~~   87 (288)
                      +|.++|..
T Consensus       258 vid~~G~~  265 (398)
T 1kol_A          258 AVDAVGFE  265 (398)
T ss_dssp             EEECCCTT
T ss_pred             EEECCCCc
Confidence            99999854

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=94.62  E-value=0.3  Score=41.53  Aligned_cols=151  Identities=14%  Similarity=0.159  Sum_probs=81.0

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhh----CCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKE----DDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |+|| |.+|.+++..|+..|. +|++++++++.++.....+...    ....++... .|+   +           ....
T Consensus        19 ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~---~-----------al~~   82 (328)
T 2hjr_A           19 IIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY---E-----------YLQN   82 (328)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---G-----------GGTT
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH---H-----------HHCC
Confidence            6787 9999999999999998 9999999988777544333321    112233321 221   1           1236


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      .|+||.++|..... ..+..   +.+..|.    -+.+.+.+.+.+..    +.+.++++|-+........       ..
T Consensus        83 aD~VI~avg~p~k~-g~tr~---dl~~~n~----~i~~~i~~~i~~~~----p~a~viv~tNP~~~~t~~~-------~~  143 (328)
T 2hjr_A           83 SDVVIITAGVPRKP-NMTRS---DLLTVNA----KIVGSVAENVGKYC----PNAFVICITNPLDAMVYYF-------KE  143 (328)
T ss_dssp             CSEEEECCSCCCCT-TCCSG---GGHHHHH----HHHHHHHHHHHHHC----TTCEEEECCSSHHHHHHHH-------HH
T ss_pred             CCEEEEcCCCCCCC-CCchh---hHHhhhH----HHHHHHHHHHHHHC----CCeEEEEecCchHHHHHHH-------HH
Confidence            89999999875422 11111   2223233    33444444443321    1456666665544321000       01


Q ss_pred             CCCCCccccchhh-HHHHHHHHHHHHHHhccc
Q 023054          157 RAGYSDKKAYGQS-KLANILHANELSRRFQEE  187 (288)
Q Consensus       157 ~~~~~~~~~Y~~s-K~a~~~~~~~la~~~~~~  187 (288)
                      ..++++....|.. -.--..+-..+++.++-.
T Consensus       144 ~~~~~~~rviG~~t~Ld~~R~~~~la~~lgv~  175 (328)
T 2hjr_A          144 KSGIPANKVCGMSGVLDSARFRCNLSRALGVK  175 (328)
T ss_dssp             HHCCCGGGEEESCHHHHHHHHHHHHHHHHTSC
T ss_pred             hcCCChhhEEEeCcHHHHHHHHHHHHHHhCCC
Confidence            1134455556664 222233667777777643

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.60  E-value=0.34  Score=40.52  Aligned_cols=36  Identities=19%  Similarity=0.308  Sum_probs=31.0

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      |.|+ |.+|.++|..|++.|++|++++|+++.++...
T Consensus        20 VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           20 VIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            4555 89999999999999999999999998877643

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=94.59  E-value=0.05  Score=47.19  Aligned_cols=74  Identities=16%  Similarity=0.124  Sum_probs=47.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCCh-HHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI-ASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id   78 (288)
                      ||+|+ |+||...++.+...|+ +|+++++++++.+.+. ++     +.. .+  +|..+. +++.+.+.++.  .+++|
T Consensus       196 lV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~v--i~~~~~~~~~~~~i~~~t--~gg~D  263 (373)
T 1p0f_A          196 AVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GAT-EC--LNPKDYDKPIYEVICEKT--NGGVD  263 (373)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCS-EE--ECGGGCSSCHHHHHHHHT--TSCBS
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCc-EE--EecccccchHHHHHHHHh--CCCCC
Confidence            57885 9999998887777899 8999999888766443 22     332 22  344321 22333333332  24799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.++|.
T Consensus       264 vvid~~g~  271 (373)
T 1p0f_A          264 YAVECAGR  271 (373)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999884

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=94.59  E-value=0.36  Score=40.71  Aligned_cols=150  Identities=15%  Similarity=0.077  Sum_probs=82.6

Q ss_pred             cccCCChhHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhh----CCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            2 LAGGASGIGLETARVLALR--KAHVIIAARNMAAANEARQLILKE----DDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |.|+ |.+|..++..|++.  |.+|++++++++.++.....+...    ....++...    +|.+.           ..
T Consensus         5 VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~~-----------l~   68 (310)
T 1guz_A            5 VIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS----NDYAD-----------TA   68 (310)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE----SCGGG-----------GT
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC----CCHHH-----------HC
Confidence            6787 99999999999985  789999999988777544333221    111222211    22211           23


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ..|++|.+++.....    .....+.+..|..-...+.+.+.++.   +     ++.|++++-........       +.
T Consensus        69 ~aDvViiav~~p~~~----g~~r~dl~~~n~~i~~~i~~~i~~~~---~-----~~~viv~tNP~~~~~~~-------~~  129 (310)
T 1guz_A           69 NSDIVIITAGLPRKP----GMTREDLLMKNAGIVKEVTDNIMKHS---K-----NPIIIVVSNPLDIMTHV-------AW  129 (310)
T ss_dssp             TCSEEEECCSCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHHC---S-----SCEEEECCSSHHHHHHH-------HH
T ss_pred             CCCEEEEeCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHhC---C-----CcEEEEEcCchHHHHHH-------HH
Confidence            689999999854211    11123444555554445555554442   1     46777776655442100       00


Q ss_pred             CCCCCCccccchh-hHHHHHHHHHHHHHHhcc
Q 023054          156 DRAGYSDKKAYGQ-SKLANILHANELSRRFQE  186 (288)
Q Consensus       156 ~~~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~  186 (288)
                      ...++++....+. +-.-...+...+++.++-
T Consensus       130 ~~~~~~~~rviG~gt~ld~~r~~~~la~~l~v  161 (310)
T 1guz_A          130 VRSGLPKERVIGMAGVLDAARFRSFIAMELGV  161 (310)
T ss_dssp             HHHCSCGGGEEEECHHHHHHHHHHHHHHHHTC
T ss_pred             HhcCCChHHEEECCCchHHHHHHHHHHHHhCC
Confidence            1123445555555 433345556667777753

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=94.47  E-value=0.32  Score=41.20  Aligned_cols=72  Identities=17%  Similarity=0.194  Sum_probs=47.9

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |.|+ |.+|.+++..|++.|.  +|++++++++.++.....+....+ .....+. .  ++.+.           ....|
T Consensus         5 VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~~-----------~~~aD   69 (319)
T 1a5z_A            5 IVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYAD-----------LKGSD   69 (319)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGGG-----------GTTCS
T ss_pred             EECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHHH-----------hCCCC
Confidence            6787 9999999999999998  999999998877765544432211 0011111 1  23221           12689


Q ss_pred             eEEEccccCC
Q 023054           79 ILINNAGIMF   88 (288)
Q Consensus        79 ~lv~~ag~~~   88 (288)
                      +||.+++...
T Consensus        70 vViiav~~~~   79 (319)
T 1a5z_A           70 VVIVAAGVPQ   79 (319)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEEccCCCC
Confidence            9999998653

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=94.47  E-value=0.065  Score=46.93  Aligned_cols=74  Identities=19%  Similarity=0.226  Sum_probs=47.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHH-HHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS-IKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~~id   78 (288)
                      ||.|+ |+||...++.+...|+ +|+.+++++++++.+.    +.  +.  .+  +|..+.+. .+. +.++.. ..++|
T Consensus       190 lV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~l--Ga--~~--i~~~~~~~~~~~-~~~~~~-g~g~D  256 (398)
T 2dph_A          190 YIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DA--GF--ET--IDLRNSAPLRDQ-IDQILG-KPEVD  256 (398)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TT--TC--EE--EETTSSSCHHHH-HHHHHS-SSCEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----Hc--CC--cE--EcCCCcchHHHH-HHHHhC-CCCCC
Confidence            57886 9999998887777899 8999999988765432    22  33  32  46554332 222 222211 12699


Q ss_pred             eEEEccccC
Q 023054           79 ILINNAGIM   87 (288)
Q Consensus        79 ~lv~~ag~~   87 (288)
                      ++|.++|..
T Consensus       257 vvid~~g~~  265 (398)
T 2dph_A          257 CGVDAVGFE  265 (398)
T ss_dssp             EEEECSCTT
T ss_pred             EEEECCCCc
Confidence            999999853

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=94.46  E-value=0.044  Score=49.11  Aligned_cols=69  Identities=13%  Similarity=0.122  Sum_probs=53.1

Q ss_pred             cCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            4 GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      =|.|.+|+.+|+.|.++|++|++++++++.++++.+.+       .+.++..|-++++.++++-      ....|++|..
T Consensus         9 ~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Ag------i~~ad~~ia~   75 (461)
T 4g65_A            9 LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAG------AQDADMLVAV   75 (461)
T ss_dssp             ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHT------TTTCSEEEEC
T ss_pred             ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcC------CCcCCEEEEE
Confidence            35689999999999999999999999998887665443       3677889999987766541      1356777765


Q ss_pred             cc
Q 023054           84 AG   85 (288)
Q Consensus        84 ag   85 (288)
                      .+
T Consensus        76 t~   77 (461)
T 4g65_A           76 TN   77 (461)
T ss_dssp             CS
T ss_pred             cC
Confidence            54

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=94.37  E-value=0.023  Score=48.44  Aligned_cols=37  Identities=24%  Similarity=0.358  Sum_probs=32.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      ||+||+|+||...++.+...|++|+++++++++.+.+
T Consensus       155 lV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          155 LVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             EEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            5899999999999988888999999999987766544

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=94.34  E-value=0.037  Score=47.29  Aligned_cols=68  Identities=13%  Similarity=0.114  Sum_probs=51.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|+ |.+|+.+++.|.++|. |++++++++..+ ..+        ..+.++..|.+|++.++++      ...+.|.+
T Consensus       119 iI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a------~i~~a~~v  181 (336)
T 1lnq_A          119 VICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA------NVRGARAV  181 (336)
T ss_dssp             EEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT------CSTTEEEE
T ss_pred             EEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc------ChhhccEE
Confidence            35675 8999999999999999 999999998765 322        2477899999998776643      12367888


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |...+
T Consensus       182 i~~~~  186 (336)
T 1lnq_A          182 IVDLE  186 (336)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            87653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=94.31  E-value=0.51  Score=39.72  Aligned_cols=157  Identities=15%  Similarity=0.138  Sum_probs=82.1

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhh----CCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKE----DDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |+|| |.+|..++..|+..|. +|+++++++++++.....+...    ....++... .|.   +           ....
T Consensus         7 VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~---~-----------a~~~   70 (309)
T 1ur5_A            7 IIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NNY---A-----------DTAN   70 (309)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SCG---G-----------GGTT
T ss_pred             EECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CCH---H-----------HHCC
Confidence            7898 9999999999999996 8999999987776544444331    112222221 221   1           1236


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      .|++|.++|...... .+.   ...+..|    ..+.+.+.+.+.+..    +.+.|+++|-+.......       +..
T Consensus        71 aD~Vi~a~g~p~~~g-~~r---~dl~~~n----~~i~~~i~~~i~~~~----p~a~vi~~tNPv~~~t~~-------~~~  131 (309)
T 1ur5_A           71 SDVIVVTSGAPRKPG-MSR---EDLIKVN----ADITRACISQAAPLS----PNAVIIMVNNPLDAMTYL-------AAE  131 (309)
T ss_dssp             CSEEEECCCC------------CHHHHHH----HHHHHHHHHHHGGGC----TTCEEEECCSSHHHHHHH-------HHH
T ss_pred             CCEEEEcCCCCCCCC-CCH---HHHHHHH----HHHHHHHHHHHHhhC----CCeEEEEcCCchHHHHHH-------HHH
Confidence            899999999754221 111   1222223    233444444444321    145566655544433100       001


Q ss_pred             CCCCCccccchh-hHHHHHHHHHHHHHHhcccCCceEE
Q 023054          157 RAGYSDKKAYGQ-SKLANILHANELSRRFQEEGVNITA  193 (288)
Q Consensus       157 ~~~~~~~~~Y~~-sK~a~~~~~~~la~~~~~~~~~i~v  193 (288)
                      ..++++....|. +-.--..+-..+++.++-....|++
T Consensus       132 ~~~~~~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~  169 (309)
T 1ur5_A          132 VSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQA  169 (309)
T ss_dssp             HHCCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred             HcCCCHHHEEECCcchHHHHHHHHHHHHhCCChhheeE
Confidence            123555556666 4333456666777777643222554

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=94.27  E-value=0.075  Score=46.70  Aligned_cols=36  Identities=17%  Similarity=0.087  Sum_probs=31.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|+|+ |.+|..+++.+...|++|++++++...++..
T Consensus       176 ~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          176 MVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             EEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            36775 8999999999999999999999998877654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=94.07  E-value=0.13  Score=43.07  Aligned_cols=78  Identities=12%  Similarity=0.170  Sum_probs=51.4

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-------HHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQL-------ILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |.|-+|..+++.|++.|++|++++|++++.+++.+.       +....  . ..++..=+.+...++.+++.+.....+=
T Consensus        22 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~--~-aDvvi~~vp~~~~~~~v~~~l~~~l~~g   98 (296)
T 3qha_A           22 GLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVA--A-ADLIHITVLDDAQVREVVGELAGHAKPG   98 (296)
T ss_dssp             CCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHT--T-SSEEEECCSSHHHHHHHHHHHHTTCCTT
T ss_pred             CcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHH--h-CCEEEEECCChHHHHHHHHHHHHhcCCC
Confidence            368899999999999999999999998876655431       11111  1 3344445556667777777776544333


Q ss_pred             ceEEEccc
Q 023054           78 NILINNAG   85 (288)
Q Consensus        78 d~lv~~ag   85 (288)
                      .++|++..
T Consensus        99 ~ivv~~st  106 (296)
T 3qha_A           99 TVIAIHST  106 (296)
T ss_dssp             CEEEECSC
T ss_pred             CEEEEeCC
Confidence            45565543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=94.06  E-value=0.12  Score=44.29  Aligned_cols=73  Identities=15%  Similarity=0.212  Sum_probs=45.3

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+|+ |++|...++.+... |++|+.+++++++.+.+.+ +     +... +  .|..+ +..+.+.+ +.. ..++|+
T Consensus       176 lv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-l-----Ga~~-~--i~~~~-~~~~~v~~-~t~-g~g~d~  242 (345)
T 3jv7_A          176 VVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-V-----GADA-A--VKSGA-GAADAIRE-LTG-GQGATA  242 (345)
T ss_dssp             EEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-T-----TCSE-E--EECST-THHHHHHH-HHG-GGCEEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-c-----CCCE-E--EcCCC-cHHHHHHH-HhC-CCCCeE
Confidence            57887 99999977766556 7899999999887764432 2     2222 2  23333 22232222 211 127999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      ++.+.|.
T Consensus       243 v~d~~G~  249 (345)
T 3jv7_A          243 VFDFVGA  249 (345)
T ss_dssp             EEESSCC
T ss_pred             EEECCCC
Confidence            9999884

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=93.84  E-value=0.14  Score=45.44  Aligned_cols=73  Identities=18%  Similarity=0.244  Sum_probs=51.2

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCChH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSSIA   61 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   61 (288)
                      |.| .||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+..++.+..
T Consensus        45 vvG-~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~~  123 (434)
T 1tt5_B           45 VIG-AGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFN  123 (434)
T ss_dssp             EEC-SSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGGGBC
T ss_pred             EEC-cCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccchhh
Confidence            444 58999999999999997 688885431                   356667777777777777887777666532


Q ss_pred             HHHHHHHHHHhcCCCcceEEEcc
Q 023054           62 SIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        62 ~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                        ..++       ...|+||.+.
T Consensus       124 --~~~~-------~~~DlVi~~~  137 (434)
T 1tt5_B          124 --DTFY-------RQFHIIVCGL  137 (434)
T ss_dssp             --HHHH-------TTCSEEEECC
T ss_pred             --HHHh-------cCCCEEEECC
Confidence              1222       2578888764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=93.82  E-value=0.017  Score=48.08  Aligned_cols=35  Identities=23%  Similarity=0.277  Sum_probs=30.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANE   36 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~   36 (288)
                      +|+|+ ||+|++++..|++.|+ +|++++|+.+++++
T Consensus       121 lvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          121 LILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             EEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             EEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            47786 7999999999999999 89999999876554

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=93.80  E-value=0.045  Score=47.20  Aligned_cols=31  Identities=19%  Similarity=0.266  Sum_probs=25.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM   31 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~   31 (288)
                      ||+||+|++|...++.+...|++++++.++.
T Consensus       172 lV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (357)
T 1zsy_A          172 IQNASNSGVGQAVIQIAAALGLRTINVVRDR  202 (357)
T ss_dssp             EESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             EEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence            5899999999998877777899988777543

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=93.73  E-value=0.39  Score=40.57  Aligned_cols=35  Identities=14%  Similarity=0.183  Sum_probs=30.8

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEA   37 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~   37 (288)
                      |.|+ |.+|.+++..|++.|. +|++++++++.++..
T Consensus         9 VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            9 VIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             EECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            6787 9999999999999998 999999998776653

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=93.65  E-value=0.12  Score=42.91  Aligned_cols=35  Identities=26%  Similarity=0.209  Sum_probs=30.3

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQ   39 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~   39 (288)
                      |.|.+|..+++.|++.|++|++++|++++.+++.+
T Consensus         8 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   42 (287)
T 3pef_A            8 GLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA   42 (287)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH
T ss_pred             eecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            36899999999999999999999999887766543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=93.61  E-value=0.052  Score=44.49  Aligned_cols=35  Identities=14%  Similarity=0.223  Sum_probs=30.2

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEA   37 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~   37 (288)
                      |.|+ ||.|++++..|++.|+ +|++++|+.++++++
T Consensus       113 iiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          113 VVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             EECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            5665 8999999999999998 899999998876554

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=93.56  E-value=0.21  Score=41.48  Aligned_cols=79  Identities=13%  Similarity=0.114  Sum_probs=50.8

Q ss_pred             cccCCChhHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHHH--------hhCCCCceEEEEecCCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKA---HVIIAARNMAAANEARQLIL--------KEDDTARVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~---~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |.| .|-+|.++++.|++.|+   +|++++|++++.+++.+...        .......+.++.+   .++.+..+++++
T Consensus         8 iIG-~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~vl~~l   83 (280)
T 3tri_A            8 FIG-GGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMVCEEL   83 (280)
T ss_dssp             EES-CSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHHHHHH
T ss_pred             EEc-ccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHHHHHH
Confidence            344 48999999999999998   89999999988777665321        0001233444444   345666667666


Q ss_pred             Hhc-CCCcc-eEEEccc
Q 023054           71 IAL-NLPLN-ILINNAG   85 (288)
Q Consensus        71 ~~~-~~~id-~lv~~ag   85 (288)
                      ... . +.+ ++|++++
T Consensus        84 ~~~~l-~~~~iiiS~~a   99 (280)
T 3tri_A           84 KDILS-ETKILVISLAV   99 (280)
T ss_dssp             HHHHH-TTTCEEEECCT
T ss_pred             Hhhcc-CCCeEEEEecC
Confidence            543 2 233 6676654

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=93.51  E-value=0.15  Score=42.68  Aligned_cols=74  Identities=19%  Similarity=0.174  Sum_probs=46.8

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc-eE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN-IL   80 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id-~l   80 (288)
                      |.||.|.||.+++..|.+.|++|++++|+++..  ..+.+ .   ...+.++.+-.   ..+..+++++..... .+ +|
T Consensus        26 iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~-~---~aDvVilavp~---~~~~~vl~~l~~~l~-~~~iv   95 (298)
T 2pv7_A           26 IVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESIL-A---NADVVIVSVPI---NLTLETIERLKPYLT-ENMLL   95 (298)
T ss_dssp             EETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHH-T---TCSEEEECSCG---GGHHHHHHHHGGGCC-TTSEE
T ss_pred             EEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHh-c---CCCEEEEeCCH---HHHHHHHHHHHhhcC-CCcEE
Confidence            678899999999999999999999999986531  11111 1   34455554432   336666777654332 23 44


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +..++
T Consensus        96 ~~~~s  100 (298)
T 2pv7_A           96 ADLTS  100 (298)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            44444

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=93.43  E-value=0.54  Score=38.64  Aligned_cols=36  Identities=25%  Similarity=0.219  Sum_probs=31.2

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      |.| .|.+|.++++.|.+.|++|++++|+++..+...
T Consensus         5 iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~   40 (279)
T 2f1k_A            5 VVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV   40 (279)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            556 799999999999999999999999988776643

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=93.42  E-value=0.68  Score=40.06  Aligned_cols=118  Identities=8%  Similarity=-0.015  Sum_probs=66.1

Q ss_pred             cccCCChhHHHHHHHHHHCCC--E---EEEEeC----ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh
Q 023054            2 LAGGASGIGLETARVLALRKA--H---VIIAAR----NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA   72 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~---V~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   72 (288)
                      |+||+|.||.+++..|+..+.  .   |++...    +++.++.....+....... ..-  ..+++ +.    .    +
T Consensus        37 ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~-~~~--v~i~~-~~----y----~  104 (375)
T 7mdh_A           37 VSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL-LRE--VSIGI-DP----Y----E  104 (375)
T ss_dssp             EETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EEE--EEEES-CH----H----H
T ss_pred             EECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhh-cCC--cEEec-CC----H----H
Confidence            799999999999999998764  2   666543    4444555555555432111 111  11221 11    1    1


Q ss_pred             cCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc
Q 023054           73 LNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ  142 (288)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  142 (288)
                      .+...|++|..||....+    .+.-.+.++.|..    +++.+.+.+.+..   .+.+.|+++|-+.-.
T Consensus       105 ~~~daDvVVitag~prkp----G~tR~DLl~~N~~----I~k~i~~~i~~~a---~p~~ivlVvsNPvD~  163 (375)
T 7mdh_A          105 VFEDVDWALLIGAKPRGP----GMERAALLDINGQ----IFADQGKALNAVA---SKNVKVLVVGNPCNT  163 (375)
T ss_dssp             HTTTCSEEEECCCCCCCT----TCCHHHHHHHHHH----HHHHHHHHHHHHS---CTTCEEEECSSSHHH
T ss_pred             HhCCCCEEEEcCCCCCCC----CCCHHHHHHHHHH----HHHHHHHHHHHhc---CCCeEEEEecCchhH
Confidence            234789999999975321    1233455666654    3444444444420   015778888776433

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=93.19  E-value=0.1  Score=42.89  Aligned_cols=39  Identities=21%  Similarity=0.139  Sum_probs=33.0

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI   41 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~   41 (288)
                      |.|+ |++|+++++.|.+.|++|++++|+.++.+++.+.+
T Consensus       121 iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          121 VLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             EECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            5664 88999999999999999999999998877666544

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=93.12  E-value=0.27  Score=41.61  Aligned_cols=34  Identities=26%  Similarity=0.260  Sum_probs=30.2

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      |.|.+|..+++.|++.|++|++++|++++.+++.
T Consensus        38 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~   71 (320)
T 4dll_A           38 GTGSMGLPMARRLCEAGYALQVWNRTPARAASLA   71 (320)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            4688999999999999999999999998877654

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=93.09  E-value=0.16  Score=45.55  Aligned_cols=123  Identities=12%  Similarity=0.113  Sum_probs=69.0

Q ss_pred             cccCCC-hhHHHHHHHHHHC----CCEEEEEeCChHHHHHHHHHHHh---hC-CCCceEEEEecCCChHHHHHHHHHHHh
Q 023054            2 LAGGAS-GIGLETARVLALR----KAHVIIAARNMAAANEARQLILK---ED-DTARVDTLKLDLSSIASIKDFAQNFIA   72 (288)
Q Consensus         2 ItGas~-gIG~~ia~~La~~----G~~V~~~~r~~~~~~~~~~~~~~---~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~   72 (288)
                      |.||++ |.|.+++..|++.    |.+|++++++++.++...+....   .. ...++...    +|.   .+.+     
T Consensus         8 VIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~t----tD~---~eal-----   75 (480)
T 1obb_A            8 IIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT----MNL---DDVI-----   75 (480)
T ss_dssp             EETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE----SCH---HHHH-----
T ss_pred             EECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEE----CCH---HHHh-----
Confidence            679888 8899999988854    78999999999887765444322   11 12222221    232   1112     


Q ss_pred             cCCCcceEEEccccCCCC-----------CCCCCCcchhhhhh--------hhhHHHHHHHhhHHHHHHhhccCCCCCeE
Q 023054           73 LNLPLNILINNAGIMFCP-----------YQISEDGIEMQFAT--------NHIGHFLLTNLLLDTMNRTAKETGIEGRI  133 (288)
Q Consensus        73 ~~~~id~lv~~ag~~~~~-----------~~~~~~~~~~~~~~--------n~~~~~~l~~~~~~~~~~~~~~~~~~g~i  133 (288)
                        .+.|+||..+|.....           .... ..++++...        ...-++-+++.+.+.+.+..    +.+.|
T Consensus        76 --~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~-~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~----P~A~i  148 (480)
T 1obb_A           76 --IDADFVINTAMVGGHTYLEKVRQIGEKYGYY-RGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS----PKAWY  148 (480)
T ss_dssp             --TTCSEEEECCCTTHHHHHHHHHHHHHHTTCT-TCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC----TTCEE
T ss_pred             --CCCCEEEECCCcccccccccccccccccccc-cchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHC----CCeEE
Confidence              2679999999863210           0000 001111111        13344556666666665542    15677


Q ss_pred             EEEcCccccc
Q 023054          134 VNLSSIAHQY  143 (288)
Q Consensus       134 v~vsS~~~~~  143 (288)
                      +++|=+...+
T Consensus       149 i~~TNPvdi~  158 (480)
T 1obb_A          149 LQAANPIFEG  158 (480)
T ss_dssp             EECSSCHHHH
T ss_pred             EEeCCcHHHH
Confidence            7777776554

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=93.04  E-value=0.13  Score=44.19  Aligned_cols=73  Identities=16%  Similarity=0.189  Sum_probs=50.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCC-------------------hHHHHHHHHHHHhhCCCCceEEEEecCCChH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARN-------------------MAAANEARQLILKEDDTARVDTLKLDLSSIA   61 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~   61 (288)
                      |.| .||+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+.+.+|..++..+..++++. 
T Consensus        41 ivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~~~-  118 (346)
T 1y8q_A           41 LVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTEDIEKK-  118 (346)
T ss_dssp             EEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSCGGGC-
T ss_pred             EEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEecccCcc-
Confidence            444 68999999999999998 78888532                   246777777888877777777776665431 


Q ss_pred             HHHHHHHHHHhcCCCcceEEEcc
Q 023054           62 SIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        62 ~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                       ...++       ...|+||.+.
T Consensus       119 -~~~~~-------~~~dvVv~~~  133 (346)
T 1y8q_A          119 -PESFF-------TQFDAVCLTC  133 (346)
T ss_dssp             -CHHHH-------TTCSEEEEES
T ss_pred             -hHHHh-------cCCCEEEEcC
Confidence             12222       2568887653

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=93.02  E-value=0.27  Score=42.62  Aligned_cols=37  Identities=16%  Similarity=0.053  Sum_probs=31.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQ   39 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~   39 (288)
                      |.|+ |.+|..+++.+...|++|++++|+..+++.+.+
T Consensus       189 ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          189 VLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             EESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             EECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5665 799999999999999999999999987776543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=92.97  E-value=0.33  Score=41.38  Aligned_cols=74  Identities=19%  Similarity=0.167  Sum_probs=44.4

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||.|| |++|...+..+... |++|+.+++++++++...+ +     +.. .  ..|..+.+..+++.+..  ...++|.
T Consensus       168 lV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~-~-----Ga~-~--~i~~~~~~~~~~v~~~t--~g~g~d~  235 (348)
T 4eez_A          168 VIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK-I-----GAD-V--TINSGDVNPVDEIKKIT--GGLGVQS  235 (348)
T ss_dssp             EEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH-T-----TCS-E--EEEC-CCCHHHHHHHHT--TSSCEEE
T ss_pred             EEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh-c-----CCe-E--EEeCCCCCHHHHhhhhc--CCCCceE
Confidence            46776 77887777777665 7899999999887653322 2     222 2  23666655444433221  1225888


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      ++.+++.
T Consensus       236 ~~~~~~~  242 (348)
T 4eez_A          236 AIVCAVA  242 (348)
T ss_dssp             EEECCSC
T ss_pred             EEEeccC
Confidence            8888763

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=92.82  E-value=0.54  Score=38.39  Aligned_cols=84  Identities=17%  Similarity=0.206  Sum_probs=51.4

Q ss_pred             cccCCChhHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhh---CC---CCceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            2 LAGGASGIGLETARVLALRKAH-VIIAARNMAAANEARQLILKE---DD---TARVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~-V~~~~r~~~~~~~~~~~~~~~---~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      |.|+ |.+|..++..|++.|++ |.+++|+++..++..+.+.-.   ..   -..+.++..= .....+.++++.+....
T Consensus        15 iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a-v~~~~~~~v~~~l~~~~   92 (266)
T 3d1l_A           15 LIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS-LKDSAFAELLQGIVEGK   92 (266)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC-CCHHHHHHHHHHHHTTC
T ss_pred             EEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe-cCHHHHHHHHHHHHhhc
Confidence            4564 89999999999999998 899999998877766542100   00   0112222222 23345677777776543


Q ss_pred             CCcceEEEccccC
Q 023054           75 LPLNILINNAGIM   87 (288)
Q Consensus        75 ~~id~lv~~ag~~   87 (288)
                      .+=.++|++++..
T Consensus        93 ~~~~ivv~~s~~~  105 (266)
T 3d1l_A           93 REEALMVHTAGSI  105 (266)
T ss_dssp             CTTCEEEECCTTS
T ss_pred             CCCcEEEECCCCC
Confidence            2224567776543

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=92.80  E-value=0.23  Score=41.61  Aligned_cols=35  Identities=20%  Similarity=0.104  Sum_probs=31.0

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQ   39 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~   39 (288)
                      |.|.+|..+++.|++.|++|++++|++++.+.+.+
T Consensus        14 G~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A           14 GLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            46899999999999999999999999988776554

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=92.78  E-value=0.86  Score=39.22  Aligned_cols=34  Identities=18%  Similarity=0.251  Sum_probs=30.0

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      |.|-+|..+++.|++.|++|++++|++++.+.+.
T Consensus        29 GlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~   62 (358)
T 4e21_A           29 GLGRMGADMVRRLRKGGHECVVYDLNVNAVQALE   62 (358)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            3789999999999999999999999998776644

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=92.78  E-value=0.13  Score=40.93  Aligned_cols=34  Identities=18%  Similarity=0.217  Sum_probs=30.0

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANE   36 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~   36 (288)
                      |.| +|.+|.++++.|++.|++|++++|+++..++
T Consensus        33 iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~   66 (215)
T 2vns_A           33 ILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR   66 (215)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH
T ss_pred             EEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            567 8999999999999999999999999876554

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=92.71  E-value=0.072  Score=44.96  Aligned_cols=63  Identities=8%  Similarity=-0.004  Sum_probs=41.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+|| |++|...++.+...|++|+.++ ++++.+.+. ++     +.. .++  |  |   .+++       ..++|++
T Consensus       147 lV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~l-----Ga~-~v~--~--d---~~~v-------~~g~Dvv  203 (315)
T 3goh_A          147 LIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KR-----GVR-HLY--R--E---PSQV-------TQKYFAI  203 (315)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HH-----TEE-EEE--S--S---GGGC-------CSCEEEE
T ss_pred             EEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-Hc-----CCC-EEE--c--C---HHHh-------CCCccEE
Confidence            58999 9999998887777899999999 666655432 23     222 222  2  2   1111       4579999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      +.+.|.
T Consensus       204 ~d~~g~  209 (315)
T 3goh_A          204 FDAVNS  209 (315)
T ss_dssp             ECC---
T ss_pred             EECCCc
Confidence            999884

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=92.60  E-value=0.66  Score=35.73  Aligned_cols=72  Identities=13%  Similarity=0.111  Sum_probs=47.5

Q ss_pred             CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccc
Q 023054            6 ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus         6 s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      +|.+...+++.+. .+.+|+.++.++...+.+.+.+...+...++.++..|+.+....         ..+.+|+++.+.+
T Consensus        33 ~G~~~~~l~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---------~~~~fD~v~~~~~  102 (197)
T 3eey_A           33 NGNDTAFLASLVG-ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY---------IDCPVKAVMFNLG  102 (197)
T ss_dssp             TSHHHHHHHHHHC-TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT---------CCSCEEEEEEEES
T ss_pred             CCHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh---------ccCCceEEEEcCC
Confidence            3444444444432 12489999999998888777776643235789999997654321         1247999999987


Q ss_pred             cC
Q 023054           86 IM   87 (288)
Q Consensus        86 ~~   87 (288)
                      +.
T Consensus       103 ~~  104 (197)
T 3eey_A          103 YL  104 (197)
T ss_dssp             BC
T ss_pred             cc
Confidence            63

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=92.46  E-value=0.13  Score=44.90  Aligned_cols=36  Identities=17%  Similarity=0.141  Sum_probs=30.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      +|+|+ |++|+.+++.+...|++|++++++..+++..
T Consensus       176 ~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          176 LVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             EEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            46774 8999999999999999999999998776654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=92.37  E-value=0.21  Score=42.06  Aligned_cols=34  Identities=18%  Similarity=0.168  Sum_probs=30.1

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      |.|-+|..+++.|++.|++|++++|++++.+++.
T Consensus        28 G~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~   61 (310)
T 3doj_A           28 GLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV   61 (310)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             CccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            4689999999999999999999999998776654

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=92.34  E-value=0.72  Score=38.73  Aligned_cols=155  Identities=10%  Similarity=0.102  Sum_probs=80.3

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |+|| |.+|..++..|+.+|.  .|++.+++++ .......+.... ..++... .|+   +           .....|+
T Consensus        19 ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~-~~~i~~t-~d~---~-----------~l~~aD~   80 (303)
T 2i6t_A           19 VVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFN-LPNVEIS-KDL---S-----------ASAHSKV   80 (303)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHT-CTTEEEE-SCG---G-----------GGTTCSE
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhc-CCCeEEe-CCH---H-----------HHCCCCE
Confidence            6785 7799999999999998  8999999986 332222222222 1244432 222   1           1237899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ||..+|...+.     ..-.+.+..|    .-+.+.+.+.+.+..    +.+.++++|-+...+..       -+....+
T Consensus        81 Vi~aag~~~pG-----~tR~dl~~~n----~~i~~~i~~~i~~~~----p~a~iiv~sNP~~~~t~-------~~~~~~~  140 (303)
T 2i6t_A           81 VIFTVNSLGSS-----QSYLDVVQSN----VDMFRALVPALGHYS----QHSVLLVASQPVEIMTY-------VTWKLST  140 (303)
T ss_dssp             EEECCCC---------CCHHHHHHHH----HHHHHHHHHHHHHHT----TTCEEEECSSSHHHHHH-------HHHHHHC
T ss_pred             EEEcCCCCCCC-----CCHHHHHHHH----HHHHHHHHHHHHHhC----CCeEEEEcCChHHHHHH-------HHHHhcC
Confidence            99999984211     1112223333    334455555554421    15677777766544320       0001123


Q ss_pred             CCccccchh-hHHHHHHHHHHHHHHhcccCCceEEE
Q 023054          160 YSDKKAYGQ-SKLANILHANELSRRFQEEGVNITAN  194 (288)
Q Consensus       160 ~~~~~~Y~~-sK~a~~~~~~~la~~~~~~~~~i~v~  194 (288)
                      +++....|. +-.-...+-..+++.++-....|++.
T Consensus       141 ~p~~rviG~gt~Ld~~R~~~~la~~lgv~~~~v~~~  176 (303)
T 2i6t_A          141 FPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVW  176 (303)
T ss_dssp             CCGGGEEECTTHHHHHHHHHHHHHTSCCTTGGGGEE
T ss_pred             CCHHHeeCCCCCchHHHHHHHHHHHcCCChHHeEEE
Confidence            555556666 44444566777777776432224443

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=92.32  E-value=0.15  Score=41.38  Aligned_cols=36  Identities=17%  Similarity=0.272  Sum_probs=31.5

Q ss_pred             CCChhHHHHHHHHHHCCC----EEEEEeCChHHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKA----HVIIAARNMAAANEARQL   40 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~----~V~~~~r~~~~~~~~~~~   40 (288)
                      |.|.+|.++++.|++.|+    +|++++|++++.+.+.+.
T Consensus         9 G~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~   48 (247)
T 3gt0_A            9 GCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK   48 (247)
T ss_dssp             CCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH
Confidence            378999999999999998    999999999887776554

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=92.27  E-value=0.75  Score=37.37  Aligned_cols=67  Identities=13%  Similarity=0.163  Sum_probs=46.5

Q ss_pred             HHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccccCC
Q 023054           14 ARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIMF   88 (288)
Q Consensus        14 a~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~   88 (288)
                      +..|++++. +|+.++.++...+.+.+.+....-..++.++..|+.+...      .+  ..+.+|+||.|..+..
T Consensus        64 ~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~------~~--~~~~fD~Ii~npPy~~  131 (259)
T 3lpm_A           64 PLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD------LI--PKERADIVTCNPPYFA  131 (259)
T ss_dssp             HHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG------TS--CTTCEEEEEECCCC--
T ss_pred             HHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh------hh--ccCCccEEEECCCCCC
Confidence            445555555 8999999999888887777665434579999999886431      00  1257999999977643

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=92.13  E-value=0.13  Score=42.61  Aligned_cols=36  Identities=19%  Similarity=0.183  Sum_probs=30.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      |.|+ |++|+++++.|.+.|++|++++|+.++.+++.
T Consensus       134 iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          134 VLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             EECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            5674 79999999999999999999999987766543

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=92.02  E-value=1.3  Score=34.44  Aligned_cols=61  Identities=8%  Similarity=-0.054  Sum_probs=43.7

Q ss_pred             HHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054           14 ARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        14 a~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      +..|++.+.+|+.++.+++..+.+.+.+...+...++.++..|+.+.-          ...+.+|+++.+.
T Consensus        70 ~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------~~~~~~D~v~~~~  130 (204)
T 3njr_A           70 SVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL----------ADLPLPEAVFIGG  130 (204)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG----------TTSCCCSEEEECS
T ss_pred             HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc----------ccCCCCCEEEECC
Confidence            445556689999999999998887777665543337999999987521          1124689998665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	288
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-38
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-34
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	4e-32
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-29
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-29
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-27
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	8e-27
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-26
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-25
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-25
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-23
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-23
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-22
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-22
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-21
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-21
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-21
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	5e-21
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-20
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-20
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-20
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	8e-20
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-19
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-19
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	3e-19
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	7e-19
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	8e-19
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	9e-19
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	9e-19
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-18
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-18
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	3e-18
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-18
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-18
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-18
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	8e-17
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-16
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-16
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	6e-16
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	7e-16
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	9e-16
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-15
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-15
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-15
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	3e-15
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-15
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	5e-15
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-14
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-14
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-14
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-14
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-14
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-13
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-13
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-12
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-12
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-10
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-09
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	4e-09
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-08
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-07
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-07
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	8e-06
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-05
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	4e-05
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-04
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-04
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	4e-04

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 1e-38
 Identities = 64/287 (22%), Positives = 104/287 (36%), Gaps = 54/287 (18%)

Query: 4   GGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG  GIGL   R L       V++ AR++     A Q +  E  + R    +LD+  + S
Sbjct: 10  GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRF--HQLDIDDLQS 67

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           I+            L++L+NNAGI F            E+   TN  G   +   LL  +
Sbjct: 68  IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 127

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGG--------------------------IRFQKI 154
                    +GR+VN+SSI      K                               +K 
Sbjct: 128 KP-------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG 180

Query: 155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGV--NITANSVHPGLIMTNLFKHSAVV 212
             +       AYG +K+   + +   +R+  E+     I  N+  PG + T++    A  
Sbjct: 181 VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA-- 238

Query: 213 MRFLKFFSFFLWKNVPQGAATTCYVALHP-NLKGVTGKYFLDCNEMP 258
                       K+  +GA T  Y+AL P + +G  G++  +     
Sbjct: 239 -----------TKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ 274

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 2e-34
 Identities = 42/207 (20%), Positives = 72/207 (34%), Gaps = 18/207 (8%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   AR L  +   V+  AR +    E             +   + DLS+   I
Sbjct: 17  GASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDI 76

Query: 64  KDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                   + +  ++I INNAG+         S  G +  F  N +   + T     +M 
Sbjct: 77  LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMK 136

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
               +   +G I+N++S++                    S    Y  +K A       L 
Sbjct: 137 ERNVD---DGHIININSMSGHRVL-------------PLSVTHFYSATKYAVTALTEGLR 180

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
           +  +E   +I A  + PG++ T     
Sbjct: 181 QELREAQTHIRATCISPGVVETQFAFK 207

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  117 bits (293), Expect = 4e-32
 Identities = 58/263 (22%), Positives = 94/263 (35%), Gaps = 31/263 (11%)

Query: 4   GGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA 61
           G   GIGL   + L   K   H+I  AR++  A E     LK    +RV  L L ++   
Sbjct: 10  GANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVLPLTVTCDK 64

Query: 62  SIKDFAQNFIAL--NLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLL 116
           S+  F      +  +  L++LINNAG++       + +   I  Q   N     LLT  L
Sbjct: 65  SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL 124

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           L  +   A      G  +++S  A      G          +      AY  SK A  + 
Sbjct: 125 LPLLKNAAS--KESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMF 182

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCY 236
              L+   +++   +   +  PG + TNL   +A +              V Q  A    
Sbjct: 183 GRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKNAALT-------------VEQSTAELIS 227

Query: 237 VALHPNLKGVTGKYFL-DCNEMP 258
                +     G++F+ +     
Sbjct: 228 SFNKLD-NSHNGRFFMRNLKPYE 249

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 2e-29
 Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 23/205 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG   A  L L+ A V +   N+ A  + +  + ++ +  +   ++ D++    +
Sbjct: 10  GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQL 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           +D  +  +     L+IL+NNAG+       +E   E     N +     T L LD M++ 
Sbjct: 70  RDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQ 123

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
               G  G I+N+SS+A                    + +  Y  SK   +      +  
Sbjct: 124 NGGEG--GIIINMSSLAG---------------LMPVAQQPVYCASKHGIVGFTRSAALA 166

Query: 184 FQEEGVNITANSVHPGLIMTNLFKH 208
                  +  N++ PG + T + + 
Sbjct: 167 ANLMNSGVRLNAICPGFVNTAILES 191

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (272), Expect = 5e-29
 Identities = 47/216 (21%), Positives = 79/216 (36%), Gaps = 25/216 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG  TA   A  K+ +++   N     E       +   A+V T  +D S+   I
Sbjct: 14  GAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC--KGLGAKVHTFVVDCSNREDI 71

Query: 64  KDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
              A+   A    ++IL+NNAG+++    +   +  IE  F  N + HF  T   L  M 
Sbjct: 72  YSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMT 131

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           +        G IV ++S A   +    +               AY  SK A +     L+
Sbjct: 132 KNNH-----GHIVTVASAAGHVSVPFLL---------------AYCSSKFAAVGFHKTLT 171

Query: 182 RRF-QEEGVNITANSVHPGLIMTNLFKHSAVVMRFL 216
                 +   +    + P  + T   K+ +  +   
Sbjct: 172 DELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPT 207

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  105 bits (263), Expect = 1e-27
 Identities = 46/206 (22%), Positives = 72/206 (34%), Gaps = 27/206 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS-SIAS 62
               GIGL+T+R L  R     +    +       +L         +     D++  +A 
Sbjct: 12  AALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPK-VNITFHTYDVTVPVAE 70

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
            K   +        ++ILIN AGI+       +  IE   A N  G    T  +LD  ++
Sbjct: 71  SKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDK 124

Query: 123 TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSR 182
                G  G I N+ S+                          Y  SK A +   N L++
Sbjct: 125 RKGGPG--GIIANICSVTGFNAIHQVP---------------VYSASKAAVVSFTNSLAK 167

Query: 183 RFQEEGVNITANSVHPGLIMTNLFKH 208
                G  +TA S++PG+  T L   
Sbjct: 168 LAPITG--VTAYSINPGITRTPLVHT 191

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  103 bits (257), Expect = 8e-27
 Identities = 52/208 (25%), Positives = 79/208 (37%), Gaps = 28/208 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASG+GLE  ++L    A V  +  N AA  +     L  +   R   ++ D+SS A  
Sbjct: 13  GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ-----LAAELGERSMFVRHDVSSEADW 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMF--CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                        LN+L+NNAGI+          +        N    F+     +  M 
Sbjct: 68  TLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAM- 126

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              KETG  G I+N++S++                         Y  SK A        +
Sbjct: 127 ---KETG--GSIINMASVSS---------------WLPIEQYAGYSASKAAVSALTRAAA 166

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHS 209
              +++G  I  NS+HP  I T + + S
Sbjct: 167 LSCRKQGYAIRVNSIHPDGIYTPMMQAS 194

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  103 bits (257), Expect = 1e-26
 Identities = 59/263 (22%), Positives = 93/263 (35%), Gaps = 40/263 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA-RVDTLKLDLSSIAS 62
           G ++GIG  TA + A   A V I  R+     E RQ IL    +   V+++  D+++ A 
Sbjct: 12  GSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAG 71

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQ------ISEDGIEMQFATNHIGHFLLTNLL 116
             +     +     L+IL+NNAG      Q       S +  +     N      LT   
Sbjct: 72  QDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKA 131

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           +  ++        +G IVN+SSIA                     D   Y  +K A   +
Sbjct: 132 VPHLSS------TKGEIVNISSIASGLH--------------ATPDFPYYSIAKAAIDQY 171

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLW---KNVPQG--- 230
               +    + G  I  NS+ PGL+ T       +     K F   +    + VP G   
Sbjct: 172 TRNTAIDLIQHG--IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMG 229

Query: 231 -----AATTCYVALHPNLKGVTG 248
                A    ++A       + G
Sbjct: 230 QPQDIAEVIAFLADRKTSSYIIG 252

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.6 bits (248), Expect = 2e-25
 Identities = 46/230 (20%), Positives = 78/230 (33%), Gaps = 32/230 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIG    R      A V+I  ++ +      Q +           +  D++    +
Sbjct: 13  GGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDV 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           K      I     L+ ++NNAG    P    + S  G       N +G + LT L L  +
Sbjct: 67  KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYL 126

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            ++      +G ++N+SS+         +                Y  +K A       L
Sbjct: 127 RKS------QGNVINISSLVGAIGQAQAV---------------PYVATKGAVTAMTKAL 165

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQG 230
           +      G  +  N + PG I T L++  A +M   +          P G
Sbjct: 166 ALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG 213

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 99.3 bits (247), Expect = 2e-25
 Identities = 49/207 (23%), Positives = 73/207 (35%), Gaps = 24/207 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIGL  A       A V+I  R+     +A + +   D   ++   + D S     
Sbjct: 13  GGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD---QIQFFQHDSSDEDGW 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                       P++ L+NNAGI       + +        A N  G F  T L +  M 
Sbjct: 70  TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMK 129

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                 G+   I+N+SSI                   G     AY  SK A  + +   +
Sbjct: 130 ----NKGLGASIINMSSIEG---------------FVGDPSLGAYNASKGAVRIMSKSAA 170

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
                +  ++  N+VHPG I T L   
Sbjct: 171 LDCALKDYDVRVNTVHPGYIKTPLVDD 197

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 93.8 bits (233), Expect = 2e-23
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 28/209 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA+GIG   A   A+  A + IA    A   EA       +   RV T+K D+S    +
Sbjct: 12  GGANGIGRAIAERFAVEGADIAIADLVPAPEAEA----AIRNLGRRVLTVKCDVSQPGDV 67

Query: 64  KDFAQNFIALNLPLNILINNAGIM-FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           + F +  I+     +IL+NNAGI    P+ +++ +  +  F  N    FL+    +  M 
Sbjct: 68  EAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMK 127

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           R        GRI+NL+S  +                        Y  +K ANI     L+
Sbjct: 128 RNGW-----GRIINLTSTTY---------------WLKIEAYTHYISTKAANIGFTRALA 167

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSA 210
               ++G  IT N++ P L+ T   + SA
Sbjct: 168 SDLGKDG--ITVNAIAPSLVRTATTEASA 194

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 93.4 bits (232), Expect = 3e-23
 Identities = 39/229 (17%), Positives = 63/229 (27%), Gaps = 32/229 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA GIG   A+  A   A V +          A  +             ++DL      
Sbjct: 12  GGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI--------GGAFFQVDLEDERER 63

Query: 64  KDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
             F +        +++L+NNA I        +           N      L+ L    M 
Sbjct: 64  VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR 123

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           +          IVN++S+   +  +                  AY  SK   +     L+
Sbjct: 124 KVGGG-----AIVNVASVQGLFAEQENA---------------AYNASKGGLVNLTRSLA 163

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQG 230
                    I  N+V PG I T     +  +    +             
Sbjct: 164 LDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR 210

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 91.7 bits (227), Expect = 2e-22
 Identities = 48/207 (23%), Positives = 82/207 (39%), Gaps = 17/207 (8%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIGL   R +A   A+V +  R+ A A E  + + KE    +    + D+S+   +
Sbjct: 16  GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-VKTKAYQCDVSNTDIV 74

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
               Q   A   P++ LI NAG+       +++ +     +  N  G F     +     
Sbjct: 75  TKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWL 134

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           +  +    +G IV  SS++ Q   +  +         G   +  Y  SK A       L+
Sbjct: 135 QKQQ----KGSIVVTSSMSSQIINQSSLN--------GSLTQVFYNSSKAACSNLVKGLA 182

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
             +   G  I  N++ PG + T+   H
Sbjct: 183 AEWASAG--IRVNALSPGYVNTDQTAH 207

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.4 bits (226), Expect = 2e-22
 Identities = 44/208 (21%), Positives = 73/208 (35%), Gaps = 24/208 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG E A  LA   AHV++ AR+     +     L E   A    +   +  +   
Sbjct: 21  GASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAGTMEDMTFA 79

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           + F      L   L++LI N         +      +      N + + +LT   L  + 
Sbjct: 80  EQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK 139

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           ++       G IV +SS+A +  Y                   AY  SK A     + + 
Sbjct: 140 QS------NGSIVVVSSLAGKVAYPMVA---------------AYSASKFALDGFFSSIR 178

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHS 209
           + +    VN++      GLI T     +
Sbjct: 179 KEYSVSRVNVSITLCVLGLIDTETAMKA 206

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 88.1 bits (218), Expect = 3e-21
 Identities = 44/207 (21%), Positives = 64/207 (30%), Gaps = 27/207 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIG       A   A +   ARN    NE       +    +V     D S     
Sbjct: 15  GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW--QKKGFQVTGSVCDASLRPER 72

Query: 64  KDFAQNFIA-LNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +   Q   +     L+ILINN G +        + +      +TN    + L+ L    +
Sbjct: 73  EKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLL 132

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                                       I    I      S    Y  +K A    A  L
Sbjct: 133 --------------------KASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNL 172

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFK 207
           +  +  +G  I AN+V P +I T L +
Sbjct: 173 ACEWASDG--IRANAVAPAVIATPLAE 197

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.9 bits (220), Expect = 3e-21
 Identities = 38/206 (18%), Positives = 73/206 (35%), Gaps = 28/206 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI----LKEDDTARVDTLKLDLSS 59
           G   G+G   A   A R A V++           +       + E+   R      +  S
Sbjct: 14  GAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS 73

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLL 117
           + + +   +  +     +++++NNAGI+      +IS++  ++    +  G F +T    
Sbjct: 74  VEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAW 133

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
           D M +        GRI+  +S +  Y   G                  Y  +KL  +  A
Sbjct: 134 DHMKKQNY-----GRIIMTASASGIYGNFGQA---------------NYSAAKLGLLGLA 173

Query: 178 NELSRRFQEEGVNITANSVHPGLIMT 203
           N L    ++    I  N++ P     
Sbjct: 174 NTLVIEGRKNN--IHCNTIAPNAGSR 197

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 88.1 bits (218), Expect = 4e-21
 Identities = 45/208 (21%), Positives = 78/208 (37%), Gaps = 27/208 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ GIG      LA   A V   +RN    N+            +V+    DLSS +  
Sbjct: 15  GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQW--RSKGFKVEASVCDLSSRSER 72

Query: 64  KDFAQNFIA-LNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           ++         +  LNIL+NNAGI+        + +   +  + N    + L+ L    +
Sbjct: 73  QELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFL 132

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
             + +       +V +SS++                      +  YG +K A       L
Sbjct: 133 KASERG-----NVVFISSVSGAL---------------AVPYEAVYGATKGAMDQLTRCL 172

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKH 208
           +  + ++   I  N V PG+I T+L + 
Sbjct: 173 AFEWAKDN--IRVNGVGPGVIATSLVEM 198

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 88.1 bits (218), Expect = 5e-21
 Identities = 41/212 (19%), Positives = 73/212 (34%), Gaps = 29/212 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA-RVDTLKLDLSSIAS 62
           G ++GIG  TA + A   A+V I  R+     E RQ+ILK   +  +V+++  D+++   
Sbjct: 12  GSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDG 71

Query: 63  IKDFAQNFIALNLPLNILINNAGIMF------CPYQISEDGIEMQFATNHIGHFLLTNLL 116
                 + +     +++L+NNAG                D        N      +T  +
Sbjct: 72  QDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKV 131

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
              +  +         +   S +A                     D   Y  +K A   +
Sbjct: 132 KPHLVASKG-----EIVNVSSIVAG---------------PQAQPDFLYYAIAKAALDQY 171

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
               +    + G  I  NSV PG++ T     
Sbjct: 172 TRSTAIDLAKFG--IRVNSVSPGMVETGFTNA 201

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 86.6 bits (214), Expect = 1e-20
 Identities = 45/210 (21%), Positives = 76/210 (36%), Gaps = 27/210 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTA-RVDTLKLDLSSIAS 62
           G ++GIG   A + A   A V I  RN     E +Q ILK    A +++ +  D++  + 
Sbjct: 11  GSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASG 70

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQ----ISEDGIEMQFATNHIGHFLLTNLLLD 118
             D     +A    ++IL+NNAG              +  +  F  N      +T    +
Sbjct: 71  QDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKE 130

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
            + +T  E            I +  +   G +       +GY     Y  +K A   +  
Sbjct: 131 HLIKTKGE------------IVNVSSIVAGPQAH-----SGYP---YYACAKAALDQYTR 170

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
             +    + G  +  NSV PG + T     
Sbjct: 171 CTAIDLIQHG--VRVNSVSPGAVATGFMGA 198

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 85.6 bits (211), Expect = 3e-20
 Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 34/217 (15%)

Query: 4   GGASGIGLETARVLALRK---AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           G + G G   A  LA      + ++++AR+ +   + ++ +  +    +V     DL + 
Sbjct: 13  GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE 72

Query: 61  ASIKD----FAQNFIALNLPLNILINNAGIMFCPY-----QISEDGIEMQFATNHIGHFL 111
           A ++       +      L   +LINNA  +               +   +A N      
Sbjct: 73  AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLC 132

Query: 112 LTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKL 171
           LT+  L+    +   +                     +    +     Y     Y   K 
Sbjct: 133 LTSGTLNAFQDSPGLSKTV------------------VNISSLCALQPYKGWGLYCAGKA 174

Query: 172 ANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           A  +    L +    E  ++   S  PG +  ++ + 
Sbjct: 175 ARDM----LYQVLAAEEPSVRVLSYAPGPLDNDMQQL 207

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 4e-20
 Identities = 42/207 (20%), Positives = 75/207 (36%), Gaps = 28/207 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI---LKEDDTARVDTLKLDLSSI 60
           GGA+GIG    + L    ++V+IA+R +     A   +   L     ARV  ++ ++ + 
Sbjct: 19  GGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE 78

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLD 118
             + +  ++ +     +N L+NN G  F      IS  G      TN  G F +   +  
Sbjct: 79  EEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYS 138

Query: 119 TMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHAN 178
           +                         + G I    +  +AG+      G ++        
Sbjct: 139 S---------------------WMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTK 177

Query: 179 ELSRRFQEEGVNITANSVHPGLIMTNL 205
            L+  +   G  I  N V PG+I +  
Sbjct: 178 SLALEWACSG--IRINCVAPGVIYSQT 202

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 84.3 bits (208), Expect = 8e-20
 Identities = 45/209 (21%), Positives = 73/209 (34%), Gaps = 28/209 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA GIG  TA++     A V+IA        +    I   D    +  +  D++    +
Sbjct: 13  GGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD---VISFVHCDVTKDEDV 69

Query: 64  KDFAQNFIALNLPLNILINNAGIM----FCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
           ++     IA +  L+I+  N G++    +   +   +  +     N  G FL+       
Sbjct: 70  RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARV 129

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           M    K     G IV  +SI+                 AG      Y  +K A +     
Sbjct: 130 MIPAKK-----GSIVFTASISSF--------------TAGEGVSHVYTATKHAVLGLTTS 170

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           L     E G  I  N V P ++ + L   
Sbjct: 171 LCTELGEYG--IRVNCVSPYIVASPLLTD 197

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 83.5 bits (206), Expect = 1e-19
 Identities = 38/206 (18%), Positives = 80/206 (38%), Gaps = 33/206 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG +T + L    A V+   R  +      +      +   ++ + +DL    + 
Sbjct: 12  GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK------ECPGIEPVCVDLGDWDAT 65

Query: 64  KDFAQNFIALNLPLNILINNAGIMF--CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +           P+++L+NNA ++      +++++  +  F+ N    F ++ ++   M 
Sbjct: 66  EKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMI 121

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                    G IVN+SS+    T+   I                Y  +K A  +    ++
Sbjct: 122 NRGV----PGSIVNVSSMVAHVTFPNLI---------------TYSSTKGAMTMLTKAMA 162

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFK 207
                    I  NSV+P +++T++ K
Sbjct: 163 MELGPHK--IRVNSVNPTVVLTDMGK 186

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 84.3 bits (208), Expect = 1e-19
 Identities = 47/218 (21%), Positives = 75/218 (34%), Gaps = 36/218 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASG+G           A V +  ++     E     L+ D    V  +  D+ S+   
Sbjct: 12  GGASGLGRALVDRFVAEGAKVAVLDKSAERLAE-----LETDHGDNVLGIVGDVRSLEDQ 66

Query: 64  KDFAQNFIALNLPLNILINNAGI-------MFCPYQISEDGIEMQFATNHIGHFLLTNLL 116
           K  A   +A    ++ LI NAGI       +  P +  +   +  F  N  G+       
Sbjct: 67  KQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKAC 126

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILH 176
           L  +  +       G ++   S A  Y   GG                 Y  +K A +  
Sbjct: 127 LPALVAS------RGNVIFTISNAGFYPNGGGP---------------LYTAAKHAIVGL 165

Query: 177 ANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR 214
             EL+    E    +  N V  G I ++L   S++ M 
Sbjct: 166 VRELAF---ELAPYVRVNGVGSGGINSDLRGPSSLGMG 200

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 82.7 bits (204), Expect = 3e-19
 Identities = 43/207 (20%), Positives = 64/207 (30%), Gaps = 29/207 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA G+G E AR      A V++A                 +         LD++     
Sbjct: 12  GGARGLGAEAARQAVAAGARVVLADVLDEEGAA-----TARELGDAARYQHLDVTIEEDW 66

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +            ++ L+NNAGI         S +        N  G F+    ++  M 
Sbjct: 67  QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMK 126

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                    G IVN+SS A                        +YG SK      +   +
Sbjct: 127 DAGG-----GSIVNISSAAGLMGLALTS---------------SYGASKWGVRGLSKLAA 166

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
                +   I  NSVHPG+  T +   
Sbjct: 167 VELGTD--RIRVNSVHPGMTYTPMTAE 191

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 81.6 bits (201), Expect = 7e-19
 Identities = 43/206 (20%), Positives = 71/206 (34%), Gaps = 25/206 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  +GIG E A   A   A V+++  N  AAN     I  +    +    + D++S   +
Sbjct: 18  GAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI--QQLGGQAFACRCDITSEQEL 75

Query: 64  KDFAQNFIALNLPLNILINNAGIMF-CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
              A   I+    ++IL+NNAG     P+ +        +  N    F L+ L+   M +
Sbjct: 76  SALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEK 135

Query: 123 TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSR 182
                                     +  +  N             S L   + A +L  
Sbjct: 136 NGG---------------GVILTITSMAAENKNINMTSYASSKAAASHLVRNM-AFDLGE 179

Query: 183 RFQEEGVNITANSVHPGLIMTNLFKH 208
           +      NI  N + PG I+T+  K 
Sbjct: 180 K------NIRVNGIAPGAILTDALKS 199

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 8e-19
 Identities = 34/206 (16%), Positives = 74/206 (35%), Gaps = 33/206 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG  T + L    A V+  +R  A  +   +          ++ + +DL    + 
Sbjct: 14  GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEAT 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMF--CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +    +      P+++L+NNA +       +++++  +  F  N      ++ ++   + 
Sbjct: 68  ERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLI 123

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                      IVN+SS   Q                       Y  +K A  +    ++
Sbjct: 124 ARGVPG----AIVNVSSQCSQRAVTN---------------HSVYCSTKGALDMLTKVMA 164

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFK 207
                    I  N+V+P ++MT++ +
Sbjct: 165 LELGPHK--IRVNAVNPTVVMTSMGQ 188

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 81.3 bits (200), Expect = 9e-19
 Identities = 40/207 (19%), Positives = 74/207 (35%), Gaps = 19/207 (9%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG SG+G  TA  LA   A + +   +      ++  +L+    A V T   D+S  A +
Sbjct: 11  GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQV 70

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           + +          ++   NNAG +      +E     +F      +     L L+ + + 
Sbjct: 71  EAYVTATTERFGRIDGFFNNAG-IEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKI 129

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
            +E    G +VN +S+                          Y  +K   +      +  
Sbjct: 130 MREQ-GSGMVVNTASVGGIRGIGNQS---------------GYAAAKHGVVGLTRNSAVE 173

Query: 184 FQEEGVNITANSVHPGLIMTNLFKHSA 210
           +   G  I  N++ PG I T + ++S 
Sbjct: 174 YGRYG--IRINAIAPGAIWTPMVENSM 198

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 81.2 bits (200), Expect = 9e-19
 Identities = 39/204 (19%), Positives = 70/204 (34%), Gaps = 20/204 (9%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ G+G   A+ LA     V++A+RN+  A+EA Q +  E         + D+S+   +
Sbjct: 12  GGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL-TEKYGVETMAFRCDVSNYEEV 70

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           K   +        L+ ++N AGI       +E+    +F      +   T  +       
Sbjct: 71  KKLLEAVKEKFGKLDTVVNAAGIN--RRHPAEEFPLDEFRQVIEVNLFGTYYVCREA--- 125

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
                        S +                +     +  AY  SK         L++ 
Sbjct: 126 ------------FSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKE 173

Query: 184 FQEEGVNITANSVHPGLIMTNLFK 207
           +   G  I  N + PG   T + +
Sbjct: 174 WGRYG--IRVNVIAPGWYRTKMTE 195

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 80.2 bits (197), Expect = 2e-18
 Identities = 41/214 (19%), Positives = 75/214 (35%), Gaps = 33/214 (15%)

Query: 4   GGASGIGLETARVLALRKAH-------VIIAARNMAAANEARQLILKEDDTARVDTLKLD 56
           G   GIG   A   A    H       +++++R  A   +         + A  DT+  D
Sbjct: 8   GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC--RAEGALTDTITAD 65

Query: 57  LSSIASIKDFAQNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTN 114
           +S +A ++    + +     ++ L+NNAG+        ++E+  +    TN  G F LT 
Sbjct: 66  ISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQ 125

Query: 115 LLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI 174
            L   M R        G I  ++S+A    ++                   Y  SK    
Sbjct: 126 ALFALMERQHS-----GHIFFITSVAATKAFRHSS---------------IYCMSKFGQR 165

Query: 175 LHANELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
                +    ++    +    V PG + T ++  
Sbjct: 166 GLVETMRLYARKCN--VRITDVQPGAVYTPMWGK 197

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 80.1 bits (197), Expect = 2e-18
 Identities = 49/207 (23%), Positives = 76/207 (36%), Gaps = 26/207 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG E A++LA   +HVI  +R   + +     I  +           D+S    I
Sbjct: 17  GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI--KSFGYESSGYAGDVSKKEEI 74

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
            +     +  +  ++IL+NNAGI       ++  D  E    TN    F +T  +   M 
Sbjct: 75  SEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMI 134

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                    GRI+N+SSI       G                  Y  SK   I     L+
Sbjct: 135 NNRY-----GRIINISSIVGLTGNVGQA---------------NYSSSKAGVIGFTKSLA 174

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
           +        IT N++ PG I +++   
Sbjct: 175 KELASRN--ITVNAIAPGFISSDMTDK 199

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 80.1 bits (197), Expect = 3e-18
 Identities = 25/208 (12%), Positives = 54/208 (25%), Gaps = 33/208 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
                 G+ +A  L+     V     +    +E                 +L   S    
Sbjct: 7   NVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA--------ETYPQLKPMSEQEP 58

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
            +  +   +    +++L++N      F P  + + +          I  F L N +   M
Sbjct: 59  AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQM 118

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                                +      I          + +   Y  ++      AN L
Sbjct: 119 --------------------KKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANAL 158

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKH 208
           S+   E    I   ++ P  + +    +
Sbjct: 159 SKELGEYN--IPVFAIGPNYLHSEDSPY 184

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 79.8 bits (196), Expect = 3e-18
 Identities = 56/256 (21%), Positives = 91/256 (35%), Gaps = 41/256 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           G + GIG   A  L      V++  AR+  AA E  + I  E    +  T   D+S  A 
Sbjct: 8   GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI--EAYGGQAITFGGDVSKEAD 65

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQI--SEDGIEMQFATNHIGHFLLTNLLLDTM 120
           ++   +  I     +++++NNAGI      I   +   +     N  G FL T      M
Sbjct: 66  VEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIM 125

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
            +  K     GRI+N++S+       G                  Y  +K   I  +   
Sbjct: 126 MKKRK-----GRIINIASVVGLIGNIGQA---------------NYAAAKAGVIGFSKTA 165

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQG--------AA 232
           +R        I  N V PG I +++        +  +     +   +P G        A 
Sbjct: 166 AREGASRN--INVNVVCPGFIASDMTA------KLGEDMEKKILGTIPLGRTGQPENVAG 217

Query: 233 TTCYVALHPNLKGVTG 248
              ++AL P    +TG
Sbjct: 218 LVEFLALSPAASYITG 233

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 79.9 bits (196), Expect = 3e-18
 Identities = 44/205 (21%), Positives = 73/205 (35%), Gaps = 20/205 (9%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIGL  A  LA + A +++     AA  E  +  L      +V     DLS   ++
Sbjct: 11  GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAV 70

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           +    N +     ++IL+NN         + ED    ++      +              
Sbjct: 71  RGLVDNAVRQMGRIDILVNN--AGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH 128

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
            K+ G  GRI+N++S                          AY  +K   +      +  
Sbjct: 129 MKKQGF-GRIINIASAHGLVASANKS---------------AYVAAKHGVVGFTKVTALE 172

Query: 184 FQEEGVNITANSVHPGLIMTNLFKH 208
              +G  ITAN++ PG + T L + 
Sbjct: 173 TAGQG--ITANAICPGWVRTPLVEK 195

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 78.5 bits (193), Expect = 7e-18
 Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 32/207 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG  T  + A   A ++          EA + +           + +D++  AS+
Sbjct: 12  GAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASV 64

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +      +A    L+ +++ AGI    +  ++  +  E+    N  G FL+     + M 
Sbjct: 65  ERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMR 124

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                + +       +S  +                 G   +  Y  S    +     L+
Sbjct: 125 EKNPGSIV-----LTASRVYL----------------GNLGQANYAASMAGVVGLTRTLA 163

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
                 G  I  N++ PG I T +   
Sbjct: 164 LELGRWG--IRVNTLAPGFIETRMTAK 188

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 76.0 bits (186), Expect = 8e-17
 Identities = 40/211 (18%), Positives = 70/211 (33%), Gaps = 21/211 (9%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G    IGL TA  LA     + +   N  A  +A   +   +      +   D++S  ++
Sbjct: 12  GAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASV--REKGVEARSYVCDVTSEEAV 69

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
                + +     ++ L NNAG       + +   +       I      ++L     + 
Sbjct: 70  IGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQM 129

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
             +    GRIVN +S+A                  G  +  AYG SK A I      +  
Sbjct: 130 ITQ--NYGRIVNTASMAG---------------VKGPPNMAAYGTSKGAIIALTETAALD 172

Query: 184 FQEEGVNITANSVHPGLIMTNLFKHSAVVMR 214
                  I  N++ PG +         V ++
Sbjct: 173 LAPYN--IRVNAISPGYMGPGFMWERQVELQ 201

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 75.5 bits (185), Expect = 1e-16
 Identities = 42/207 (20%), Positives = 66/207 (31%), Gaps = 29/207 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA G+G    R +    A V+                +  +       + LD++  A  
Sbjct: 13  GGARGMGASHVRAMVAEGAKVVFGDILDEEGKA-----MAAELADAARYVHLDVTQPAQW 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQ--ISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           K      +     L++L+NNAGI+        +    +     N  G FL    ++  M 
Sbjct: 68  KAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMK 127

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                    G I+N+SSI                          Y  +K A        +
Sbjct: 128 E-----AGRGSIINISSIEGLAGTVACH---------------GYTATKFAVRGLTKSTA 167

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
                 G  I  NS+HPGL+ T +   
Sbjct: 168 LELGPSG--IRVNSIHPGLVKTPMTDW 192

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 3e-16
 Identities = 32/205 (15%), Positives = 65/205 (31%), Gaps = 20/205 (9%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG +G+G     +L+   A  +IA+R M       + I  +    +V  ++ D+     +
Sbjct: 32  GGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRDPDMV 90

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           ++     I +    NI+INNA                      I     T  +   + + 
Sbjct: 91  QNTVSELIKVAGHPNIVINNA-AGNFISPTERLSPNAWKTITDI-VLNGTAFVTLEIGKQ 148

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
             +       +++++I                   G         +K      +  L+  
Sbjct: 149 LIKAQKGAAFLSITTIYA---------------ETGSGFVVPSASAKAGVEAMSKSLAAE 193

Query: 184 FQEEGVNITANSVHPGLIMTNLFKH 208
           + + G  +  N + PG I T     
Sbjct: 194 WGKYG--MRFNVIQPGPIKTKGAFS 216

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 73.6 bits (180), Expect = 6e-16
 Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 26/209 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG   A  L  R A V++   + + A E     LK+   A+   ++ D+S  + +
Sbjct: 13  GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-AQGVAIQADISKPSEV 71

Query: 64  KDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                  ++    L+ +++N+G+       +++++  +  F  N  G F +    L    
Sbjct: 72  VALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR 131

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           R        GRI+  SSIA   T              G  +   Y  SK A        +
Sbjct: 132 RG-------GRIILTSSIAAVMT--------------GIPNHALYAGSKAAVEGFCRAFA 170

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSA 210
                +G  +T N + PG + T++F  ++
Sbjct: 171 VDCGAKG--VTVNCIAPGGVKTDMFDENS 197

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.8 bits (180), Expect = 7e-16
 Identities = 34/209 (16%), Positives = 61/209 (29%), Gaps = 26/209 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILK----EDDTARVDTLKLDLSS 59
           G +SGIGL  A  LA   +        +       +L             ++TL+LD+  
Sbjct: 9   GCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD 68

Query: 60  IASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDT 119
             S+    +      + + +     G++     + ED +      N +G   +    L  
Sbjct: 69  SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPD 128

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           M R        GR++   S+                    Y   K      L   L A  
Sbjct: 129 MKRRGS-----GRVLVTGSVGGLMGLPF---------NDVYCASKF-ALEGLCESL-AVL 172

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           L          +  + +  G + T   + 
Sbjct: 173 LLPF------GVHLSLIECGPVHTAFMEK 195

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 73.2 bits (179), Expect = 9e-16
 Identities = 53/230 (23%), Positives = 80/230 (34%), Gaps = 27/230 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG+ GIG      LA   A V   +RN    +E  ++    +    V+    DL S    
Sbjct: 13  GGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIW--REKGLNVEGSVCDLLSRTER 70

Query: 64  KDFAQNFI-ALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDTM 120
               Q      +  LNIL+NNAG++        +E    +   TN    + L+      +
Sbjct: 71  DKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQ-----I 125

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                +    G ++ LSSIA                         Y  SK A       L
Sbjct: 126 AYPLLKASQNGNVIFLSSIAGFS---------------ALPSVSLYSASKGAINQMTKSL 170

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQG 230
           +  + ++  NI  NSV PG+I+T L + +       K          P G
Sbjct: 171 ACEWAKD--NIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG 218

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 72.1 bits (175), Expect = 2e-15
 Identities = 48/213 (22%), Positives = 73/213 (34%), Gaps = 15/213 (7%)

Query: 4   GGASGIGLETARVL---ALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSI 60
           G   G+GL   + L        H+    RN   A E   L  K      +  + L     
Sbjct: 9   GCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-KNHSNIHILEIDLRNFDA 67

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMF---CPYQISEDGIEMQFATNHIGHFLLTNLLL 117
                     +  +  LN+L NNAGI         +    +     TN +   +L    L
Sbjct: 68  YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACL 127

Query: 118 DTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
             + + AK    +   V  ++I +  +  G I+    N   G     AY  SK A     
Sbjct: 128 PLLKKAAKANESQPMGVGRAAIINMSSILGSIQG---NTDGGMY---AYRTSKSALNAAT 181

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFKHSA 210
             LS     +   I   S+HPG + T++   SA
Sbjct: 182 KSLSVDLYPQR--IMCVSLHPGWVKTDMGGSSA 212

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 72.1 bits (176), Expect = 2e-15
 Identities = 39/206 (18%), Positives = 75/206 (36%), Gaps = 24/206 (11%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G ++G+G   A   A  KA V++  R+      +    +K+        +K D++  + +
Sbjct: 14  GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESDV 72

Query: 64  KDFAQNFIALNLPLNILINNAGIM--FCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
            +  Q+ I     L+++INNAG+      +++S         TN  G FL +   +    
Sbjct: 73  INLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFV 132

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                                      I    ++++  +     Y  SK    L    L+
Sbjct: 133 -------------------ENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLA 173

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFK 207
             +  +G  I  N++ PG I T +  
Sbjct: 174 LEYAPKG--IRVNNIGPGAINTPINA 197

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 72.2 bits (176), Expect = 2e-15
 Identities = 39/226 (17%), Positives = 67/226 (29%), Gaps = 24/226 (10%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA  IG   A  L  +   V++  R+   A +     L           K DLS  +S+
Sbjct: 8   GGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSL 67

Query: 64  KDFAQNFIALNL----PLNILINNAGIM----FCPYQISEDGIEMQFATNHIGHFLLTNL 115
            D  ++ I  +       ++L+NNA         P   +    + +     +     +N 
Sbjct: 68  LDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNA 127

Query: 116 LLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANI- 174
           +       A            S           +    +           Y  +K A   
Sbjct: 128 VAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFC------VYTMAKHALGG 181

Query: 175 ---LHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK 217
                A EL+ R      +I  N+V PGL +            + +
Sbjct: 182 LTRAAALELAPR------HIRVNAVAPGLSLLPPAMPQETQEEYRR 221

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 71.7 bits (175), Expect = 3e-15
 Identities = 39/204 (19%), Positives = 63/204 (30%), Gaps = 20/204 (9%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G  SGIGLE AR L      V + AR         + +   +     D    D+ S+  I
Sbjct: 9   GATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL--REAGVEADGRTCDVRSVPEI 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
           +      +    P+++L+NNAG        +E   E+           +           
Sbjct: 67  EALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFR--------- 116

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
                   + V  +    +      +       + G      Y  SK   +     L   
Sbjct: 117 ------VTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLE 170

Query: 184 FQEEGVNITANSVHPGLIMTNLFK 207
               G  IT N+V PG + T +  
Sbjct: 171 LARTG--ITVNAVCPGFVETPMAA 192

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 70.9 bits (173), Expect = 4e-15
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 33/204 (16%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG  GIGL  A+ LA     V +  R   A                   +++D++   ++
Sbjct: 14  GGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------------GVEVDVTDSDAV 60

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
                       P+ +L++NA              E +F      +      +    +R+
Sbjct: 61  DRAFTAVEEHQGPVEVLVSNA--GLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRS 118

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
            +     GR++ + S++  +               G  ++  Y  SK    +     S  
Sbjct: 119 MQRNKF-GRMIFIGSVSGLW---------------GIGNQANYAASKAG--VIGMARSIA 160

Query: 184 FQEEGVNITANSVHPGLIMTNLFK 207
            +    N+TAN V PG I T++ +
Sbjct: 161 RELSKANVTANVVAPGYIDTDMTR 184

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 71.0 bits (173), Expect = 5e-15
 Identities = 37/207 (17%), Positives = 58/207 (28%), Gaps = 25/207 (12%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG   A  L      V IA  N A A      I           +K+D+S    +
Sbjct: 8   GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEI--NQAGGHAVAVKVDVSDRDQV 65

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF--ATNHIGHFLLTNLLLDTMN 121
               +         ++++NNAG+       S     +      N  G        ++   
Sbjct: 66  FAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFK 125

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           +                   +      I         G  +   Y  SK A        +
Sbjct: 126 K-------------------EGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAA 166

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
           R     G  IT N   PG++ T ++  
Sbjct: 167 RDLAPLG--ITVNGYCPGIVKTPMWAE 191

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 69.7 bits (170), Expect = 1e-14
 Identities = 40/207 (19%), Positives = 67/207 (32%), Gaps = 32/207 (15%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G ASGIG     + A   A ++   R      EA   +      A    +  D+S   ++
Sbjct: 12  GAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAV 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMF--CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
           +      +     L+ + + AG+      + +  +  E     N  G FL+     + + 
Sbjct: 67  EAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLE 126

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                                    G +        A Y+  K  G   LA  L A EL+
Sbjct: 127 EG-----------------GSLVLTGSVAGLGAFGLAHYAAGKL-GVVGLARTL-ALELA 167

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
           R+       +  N + PGLI T +   
Sbjct: 168 RK------GVRVNVLLPGLIQTPMTAG 188

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 69.4 bits (169), Expect = 2e-14
 Identities = 53/213 (24%), Positives = 79/213 (37%), Gaps = 29/213 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G + GIG   A  LA R A VI  A +   A      +      A    L L+++  ASI
Sbjct: 11  GASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASI 65

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQF--ATNHIGHFLLTNLLLDTMN 121
           +   +   A    ++IL+NNAGI      +     E      TN    F L+  ++  M 
Sbjct: 66  ESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMM 125

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
           +        GRI+ + S+       G                  Y  +K   I  +  L+
Sbjct: 126 KKRH-----GRIITIGSVVGTMGNGGQA---------------NYAAAKAGLIGFSKSLA 165

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR 214
           R     G  IT N V PG I T++ +  +   R
Sbjct: 166 REVASRG--ITVNVVAPGFIETDMTRALSDDQR 196

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 2e-14
 Identities = 48/229 (20%), Positives = 72/229 (31%), Gaps = 34/229 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
             A GIG   A   A   A VI    N +   E  +          + T  LD++    I
Sbjct: 13  AAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTRVLDVTKKKQI 65

Query: 64  KDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
             FA         L++L N AG +         E   +     N    +L+    L  M 
Sbjct: 66  DQFANEVE----RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKML 121

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                    G I+N+SS+A                  G  ++  Y  +K A I     ++
Sbjct: 122 A-----QKSGNIINMSSVASSV--------------KGVVNRCVYSTTKAAVIGLTKSVA 162

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQG 230
             F ++G  I  N V PG + T   +         +       K    G
Sbjct: 163 ADFIQQG--IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG 209

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 68.6 bits (167), Expect = 4e-14
 Identities = 41/207 (19%), Positives = 74/207 (35%), Gaps = 28/207 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G   GIG E A  L  R   VI+   N   + E     +K++  +    +K ++  +  I
Sbjct: 25  GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-SDAACVKANVGVVEDI 83

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPY--QISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
               +  + +   L+I+ +N+G++   +   ++ +  +  F  N  G F +         
Sbjct: 84  VRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA----- 138

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAY-GQSKLANILHANEL 180
                              H       I    I  +A    K A    SK A    A  +
Sbjct: 139 -----------------YKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 181

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFK 207
           +    ++   IT N V PG I T+++ 
Sbjct: 182 AIDMADKK--ITVNVVAPGGIKTDMYH 206

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 68.0 bits (165), Expect = 4e-14
 Identities = 24/200 (12%), Positives = 50/200 (25%), Gaps = 29/200 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GG   +G             V+    +  A ++A   IL + +    +  +  L   AS 
Sbjct: 9   GGKGALGSAILEFFKKNGYTVLNIDLS--ANDQADSNILVDGNKNWTEQEQSILEQTASS 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
              +         ++ +   AG        S+D ++          +             
Sbjct: 67  LQGS--------QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHL 118

Query: 124 AKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRR 183
                    +    + A                         YG +K A     + L+ +
Sbjct: 119 KPGG----LLQLTGAAAA---------------MGPTPSMIGYGMAKAAVHHLTSSLAAK 159

Query: 184 FQEEGVNITANSVHPGLIMT 203
                 N    ++ P  + T
Sbjct: 160 DSGLPDNSAVLTIMPVTLDT 179

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.8 bits (162), Expect = 1e-13
 Identities = 25/210 (11%), Positives = 60/210 (28%), Gaps = 37/210 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNM-AAANEARQLILKEDDTARVDTLKLDLSSIAS 62
           GG   +G    +    R   V          A+ +  + + +  T + D +  ++  +  
Sbjct: 9   GGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLG 68

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNLLLDT 119
                      +  ++ ++  AG         +      ++ +  +     + ++L    
Sbjct: 69  -----------DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKH 117

Query: 120 MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
           +          G +    + A      G I                YG +K A       
Sbjct: 118 LKEG-------GLLTLAGAKAALDGTPGMIG---------------YGMAKGAVHQLCQS 155

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKHS 209
           L+ +         A +V P  + T + + S
Sbjct: 156 LAGKNSGMPSGAAAIAVLPVTLDTPMNRKS 185

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 66.7 bits (162), Expect = 1e-13
 Identities = 38/211 (18%), Positives = 62/211 (29%), Gaps = 37/211 (17%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASG+G   A  L  R   V++                   +   +  ++ D++    +
Sbjct: 8   GGASGLGRAAALALKARGYRVVVLDLR--------------REGEDLIYVEGDVTREEDV 53

Query: 64  KDFAQNFIALNLPLNILINN-----AGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLD 118
           +              ++          I+        +        N +G F +  L   
Sbjct: 54  RRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAW 113

Query: 119 TMNRTAKET-GIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
            M     +  G  G IVN +S+A      G                 AY  SK   +   
Sbjct: 114 AMRENPPDAEGQRGVIVNTASVAAFEGQIGQA---------------AYAASKGGVVALT 158

Query: 178 NELSRRFQEEGVNITANSVHPGLIMTNLFKH 208
              +R     G  I   +V PGL  T L + 
Sbjct: 159 LPAARELAGWG--IRVVTVAPGLFDTPLLQG 187

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (155), Expect = 1e-12
 Identities = 41/209 (19%), Positives = 66/209 (31%), Gaps = 21/209 (10%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGASG+GL TA  L  + A  ++     +      + +      A  D         A  
Sbjct: 12  GGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALA 71

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEM---QFATNHIGHFLLTNLLLDTM 120
               +            I  A   +   +     +E        N +G F +  L+   M
Sbjct: 72  LAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEM 131

Query: 121 NRTAKETGIE-GRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANE 179
            +   + G + G I+N +S+A      G                 AY  SK   +     
Sbjct: 132 GQNEPDQGGQRGVIINTASVAAFEGQVGQA---------------AYSASKGGIVGMTLP 176

Query: 180 LSRRFQEEGVNITANSVHPGLIMTNLFKH 208
           ++R     G  I   ++ PGL  T L   
Sbjct: 177 IARDLAPIG--IRVMTIAPGLFGTPLLTS 203

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 62.9 bits (152), Expect = 3e-12
 Identities = 37/206 (17%), Positives = 62/206 (30%), Gaps = 28/206 (13%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A GIG   A       A V IA  N+ AA          +       + LD++  ASI
Sbjct: 12  GSARGIGRAFAEAYVREGARVAIADINLEAARA-----TAAEIGPAACAIALDVTDQASI 66

Query: 64  KDFAQNFIALNLPLNILINNAGIMF--CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                  +     ++IL+NNA +       +I+ +  +  FA N  G   +   +   M 
Sbjct: 67  DRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMI 126

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
              +                +         ++     G           L        L 
Sbjct: 127 AGGR--------------GGKIINMASQAGRRGEALVGVYCATKAAVISLTQSA-GLNLI 171

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFK 207
           R        I  N++ PG++    + 
Sbjct: 172 RH------GINVNAIAPGVVDGEHWD 191

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 56.8 bits (136), Expect = 4e-10
 Identities = 15/151 (9%), Positives = 30/151 (19%), Gaps = 16/151 (10%)

Query: 3   AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
                 +G   A  L    A V ++ +      EA +L                      
Sbjct: 16  VTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQD---EE 72

Query: 63  IKDFAQNFIALNLPLNILINNAGIMF------CPYQISEDGIEMQFATNHIGHFLLTNLL 116
           +             L+ L++                       +    +      +    
Sbjct: 73  LDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA 132

Query: 117 LDTMNRTAKETGIEGRIVNLSSIAHQYTYKG 147
              +          G IV L+  A +     
Sbjct: 133 EPLLREG-------GGIVTLTYYASEKVVPK 156

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 53.9 bits (129), Expect = 3e-09
 Identities = 34/207 (16%), Positives = 60/207 (28%), Gaps = 41/207 (19%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
             + GIG   A VL+   A V I ARN      +    +  D    +D L   +  +   
Sbjct: 11  AASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEV--- 67

Query: 64  KDFAQNFIALNLPLNILINNAGIMF--CPYQISEDGIEMQFATNHIGHFLLTNLLLDTMN 121
                         +IL+ NAG        +++ +  +    +  +    +    L  M 
Sbjct: 68  --------------DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAM- 112

Query: 122 RTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
                               +  +   +     +  +   +      +++A       LS
Sbjct: 113 -------------------KEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLS 153

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKH 208
                 G  IT N V PG   T   K 
Sbjct: 154 FEVAPYG--ITVNCVAPGWTETERVKE 178

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 53.8 bits (128), Expect = 4e-09
 Identities = 25/218 (11%), Positives = 58/218 (26%), Gaps = 22/218 (10%)

Query: 3   AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
                 I    A+ +    A +    +N        +             L+ D++  AS
Sbjct: 13  VASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF---AAQLGSDIVLQCDVAEDAS 69

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
           I         +    +  +++ G      Q+  D +             +++     M +
Sbjct: 70  IDTMFAELGKVWPKFDGFVHSIGFAPG-DQLDGDYVNAVTREGFKIAHDISSYSFVAMAK 128

Query: 123 TAKETGIEG-RIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELS 181
             +     G  ++ LS +  +                        G +K +   +   ++
Sbjct: 129 ACRSMLNPGSALLTLSYLGAERAIPNYN---------------VMGLAKASLEANVRYMA 173

Query: 182 RRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF 219
                EG  +  N++  G I T          + L   
Sbjct: 174 NAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHC 209

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 51.1 bits (121), Expect = 3e-08
 Identities = 21/162 (12%), Positives = 46/162 (28%), Gaps = 37/162 (22%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           G A+GIG  T +VL      ++      A                    +  DLS+    
Sbjct: 8   GCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGR 48

Query: 64  KD-FAQNFIALNLPLNILINNAGI--------------MFCPYQISEDGIEMQFATNHIG 108
           K   A      +  ++ L+  AG+               F   ++ +  +      +   
Sbjct: 49  KQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPA 108

Query: 109 HFLLTNLLLDTMNRTAKETGIE---GRIVNLSSIAHQYTYKG 147
             +++++    +        +    G      +I      +G
Sbjct: 109 AVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQG 150

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 48.9 bits (115), Expect = 2e-07
 Identities = 39/282 (13%), Positives = 79/282 (28%), Gaps = 27/282 (9%)

Query: 3   AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
                 I    A+    + A +     N +     R +     +       +LD+S    
Sbjct: 13  VANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPI---AQELNSPYVYELDVSKEEH 69

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR 122
            K    +       L+ ++++         +    +E   +  +    +    L++  N 
Sbjct: 70  FKSLYNSVKKDLGSLDFIVHSVA-FAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNT 128

Query: 123 TAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSR 182
                     ++ LS +                         A    + A    A +L +
Sbjct: 129 LKPLLNNGASVLTLSYLGSTKYM-----------AHYNVMGLAKAALESAVRYLAVDLGK 177

Query: 183 RFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKN---VPQGAATTCYVAL 239
                  +I  N++  G I T      A     LK+             +         L
Sbjct: 178 H------HIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLL 231

Query: 240 HPNLKGVTGK-YFLDC--NEMPPSALARDETLAKKLWDFSNK 278
                GV+G+ +F+D   + M   A+   +  A  LWD   +
Sbjct: 232 SSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE 273

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 48.5 bits (114), Expect = 3e-07
 Identities = 20/132 (15%), Positives = 33/132 (25%), Gaps = 19/132 (14%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLK--------- 54
           G A  +G   A  L      V +     AA   A    L         T++         
Sbjct: 9   GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATA 68

Query: 55  --------LDLSSIASIKDFAQNFIALNLPLNILINNAGIMFC--PYQISEDGIEMQFAT 104
                     ++      +            ++L+NNA   +     +  EDG E     
Sbjct: 69  PVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGD 128

Query: 105 NHIGHFLLTNLL 116
                    +L 
Sbjct: 129 REAMETATADLF 140

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 43.8 bits (102), Expect = 8e-06
 Identities = 35/215 (16%), Positives = 59/215 (27%), Gaps = 33/215 (15%)

Query: 4   GGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLI--LKEDDTARVDTLKLDLSSI 60
           GG  G+G + AR LA R A H+++ +R+   A+ A +L+  L+                 
Sbjct: 16  GGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRE 75

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTM 120
           +  +        + L                 ++ + IE       +G   L  L  +  
Sbjct: 76  SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD 135

Query: 121 NRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANEL 180
                        V  SS A  +               G      Y          A + 
Sbjct: 136 LT---------AFVLFSSFASAF---------------GAPGLGGYAPGNAYLDGLAQQR 171

Query: 181 SRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF 215
                     + A +V  G    +      V  RF
Sbjct: 172 RSDG------LPATAVAWGTWAGSGMAEGPVADRF 200

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 43.1 bits (100), Expect = 1e-05
 Identities = 9/47 (19%), Positives = 16/47 (34%)

Query: 4  GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARV 50
          GG   +G   A  LA     +++ +R    A        +    A +
Sbjct: 7  GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI 53

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 42.0 bits (97), Expect = 4e-05
 Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 2/110 (1%)

Query: 3   AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARV--DTLKLDLSSI 60
               +G G   A+ LA   A +++     A       L   + D +RV  D   +++  +
Sbjct: 16  IADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKV 75

Query: 61  ASIKDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHF 110
             +     N   +   +      AG      Q + + +   F +  I   
Sbjct: 76  YPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 27/187 (14%), Positives = 56/187 (29%), Gaps = 14/187 (7%)

Query: 4   GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI 63
           GGA  IG    R +       ++    +  A     L    +   R +    D+   A I
Sbjct: 7   GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESN-RYNFEHADICDSAEI 65

Query: 64  KDFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRT 123
               + +       + +++ A         S  G      TN +G + L  +     +  
Sbjct: 66  TRIFEQY-----QPDAVMHLAAESHVDR--SITGPAAFIETNIVGTYALLEVARKYWSAL 118

Query: 124 AKETGIEGRIVNLSSIA------HQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHA 177
            ++     R  ++S+        H    +  +      +   Y+    Y  SK ++    
Sbjct: 119 GEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLV 178

Query: 178 NELSRRF 184
               R +
Sbjct: 179 RAWRRTY 185

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 39.4 bits (90), Expect = 2e-04
 Identities = 6/35 (17%), Positives = 12/35 (34%)

Query: 3  AGGASGIGLETARVLALRKAHVIIAARNMAAANEA 37
              S I    ARV   + A +++   +     + 
Sbjct: 14 IITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQR 48

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 39.1 bits (89), Expect = 4e-04
 Identities = 24/213 (11%), Positives = 51/213 (23%), Gaps = 12/213 (5%)

Query: 3   AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS 62
            G  +G G   A+ L+ R   +I            +     + D   +      ++ +  
Sbjct: 10  IGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDM 69

Query: 63  IKDFAQNFIALNLPLNILINNAGIMFCPYQISE------------DGIEMQFATNHIGHF 110
           +   A    A ++      N    M   Y I +            + +    A       
Sbjct: 70  LPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQK 129

Query: 111 LLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSK 170
            L N           ++      +    +         I       +           S 
Sbjct: 130 DLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGYGGGMSSA 189

Query: 171 LANILHANELSRRFQEEGVNITANSVHPGLIMT 203
            A +     +         NI  N++  G + +
Sbjct: 190 KAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	288
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.96
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.84
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.74
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.73
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.71
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.7
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.7
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.69
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.69
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.65
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.64
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.62
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.62
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.61
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.59
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.59
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.58
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.57
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.56
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.52
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.52
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.47
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.42
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.31
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.25
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.15
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.14
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.97
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.97
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.68
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.67
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.54
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.53
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.52
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.51
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.42
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.34
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.34
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.31
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.31
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.22
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.18
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.16
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.11
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.09
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.06
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.03
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.02
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.95
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.85
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.82
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.81
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.8
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.79
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.76
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.72
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.7
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.68
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.65
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.59
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.57
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.57
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.51
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.49
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.34
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.29
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.26
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.26
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.22
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.19
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.19
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.1
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.03
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.03
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.0
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.92
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.88
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	95.79
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.72
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.63
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.52
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.49
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.43
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.42
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.38
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.37
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.34
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.27
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.13
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.13
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.83
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	94.64
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.54
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	94.47
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.46
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	94.44
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	94.2
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.19
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	93.98
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.93
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.79
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	93.73
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	93.69
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.56
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.01
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.93
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	92.9
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.54
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	92.37
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	92.21
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	92.14
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	91.86
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	91.7
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.48
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.47
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.44
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	91.3
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	91.1
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.06
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	90.42
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.34
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	90.29
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	90.25
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.1
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	89.93
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	89.43
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	89.42
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	89.21
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	89.1
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	88.97
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	88.3
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.3
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	87.92
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	87.12
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	86.79
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	86.1
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	85.77
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	85.6
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	85.3
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	85.22
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	84.8
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	84.78
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	84.64
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	84.63
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	84.62
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	84.33
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	82.93
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	82.79
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	82.39
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	82.38
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	81.95
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	81.95
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	81.73
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	81.16
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	81.07
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	80.78
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	80.42
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	80.19
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	80.06

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=9.9e-51  Score=338.05  Aligned_cols=233  Identities=23%  Similarity=0.311  Sum_probs=205.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++...  +.++.++++|++|+++++++++++.+.++++|+|
T Consensus        14 lITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   91 (251)
T d2c07a1          14 LVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILTEHKNVDIL   91 (251)
T ss_dssp             EEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHhcCCceee
Confidence            69999999999999999999999999999999999999999765  5679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++++++|+.++++++++++|+|.+++     .|+||++||..+..+              
T Consensus        92 vnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~IVnisS~~~~~~--------------  152 (251)
T d2c07a1          92 VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-----YGRIINISSIVGLTG--------------  152 (251)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC--------------
T ss_pred             eeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-----CeEEEEECCHHhcCC--------------
Confidence            999998755  34677789999999999999999999999999876     799999999998874              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .+...+|++||+|+.+|+|+++.|++++|  ||||+|+||+++|+|.....  ....+...+|..++.+|+|+|+.++|
T Consensus       153 -~~~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f  229 (251)
T d2c07a1         153 -NVGQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACF  229 (251)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             67778999999999999999999999999  99999999999999987652  22334445677888899999999999


Q ss_pred             HhcCCCccCCCceeec-cCccCC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      |++ ++++++||+.|. |+|++|
T Consensus       230 L~S-~~s~~itG~~i~vDGG~sp  251 (251)
T d2c07a1         230 LSS-DKSGYINGRVFVIDGGLSP  251 (251)
T ss_dssp             HHS-GGGTTCCSCEEEESTTSCC
T ss_pred             HhC-chhCCCcCcEEEECCCcCc
Confidence            997 899999999887 676654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=9.7e-51  Score=339.28  Aligned_cols=234  Identities=21%  Similarity=0.255  Sum_probs=208.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.++++.+++...+++.++.+++||++|+++++++++++.+++|+||+|
T Consensus         8 lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiL   87 (258)
T d1iy8a_           8 LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGF   87 (258)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999999999999999888778889999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+..+   ..+.+.++|++.+++|+.++++++++++|+|.++.     .|+||++||..+..+             
T Consensus        88 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~G~Ii~isS~~~~~~-------------  149 (258)
T d1iy8a_          88 FNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-----SGMVVNTASVGGIRG-------------  149 (258)
T ss_dssp             EECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSB-------------
T ss_pred             EECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-----CCCCcccccHhhccC-------------
Confidence            999997643   33678899999999999999999999999999876     799999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----------HHHHHHHHHHhhhcCCh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----------VVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~  227 (288)
                        .+...+|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.....          ....+....|..++.+|
T Consensus       150 --~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p  225 (258)
T d1iy8a_         150 --IGNQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEA  225 (258)
T ss_dssp             --CSSBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhCccC--ceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCH
Confidence              67889999999999999999999999999  99999999999999865331          11123333467778899


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +|+|+.++||+| ++++++||+.|. |+|+.
T Consensus       226 ~dvA~~v~fL~S-~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         226 PEIAAVVAFLLS-DDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHHHHHHHHTS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhC-chhcCCcCceEEcCcchh
Confidence            999999999998 899999999887 66665

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.5e-50  Score=335.46  Aligned_cols=234  Identities=21%  Similarity=0.263  Sum_probs=206.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.+ +.++.++++|++|+++++++++++.+.+++||+|
T Consensus         9 lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL   87 (251)
T d1vl8a_           9 LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTV   87 (251)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999999999998887665 5678999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++|.++|+|.+++     .|+||+++|..+...              
T Consensus        88 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~Ii~i~S~~~~~~--------------  148 (251)
T d1vl8a_          88 VNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-----NPSIINIGSLTVEEV--------------  148 (251)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-----SCEEEEECCGGGTCC--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-----cccccccccchhccc--------------
Confidence            999998654  34788899999999999999999999999998876     689999999876442              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                      +.+...+|++||+|+.+|+++++.|++++|  ||||+|+||+++|+|.+..    .....+.+.+|..++.+|+|+|+.+
T Consensus       149 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  226 (251)
T d1vl8a_         149 TMPNISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVA  226 (251)
T ss_dssp             CSSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHH
T ss_pred             cCccccchHHHHHhHHHHHHHHHHHhcccC--eEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            355678999999999999999999999999  9999999999999998643    2223344556778889999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCccC
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +||+| ++++++||+.|. |+|++
T Consensus       227 ~fL~S-~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         227 VFLAS-EEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHhC-chhCCCcCcEEEeCcCee
Confidence            99998 899999999887 66654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-50  Score=335.62  Aligned_cols=232  Identities=22%  Similarity=0.303  Sum_probs=208.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++...  +.++.+++||++++++++++++++.+.++++|+|
T Consensus        15 lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDil   92 (255)
T d1fmca_          15 IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAISKLGKVDIL   92 (255)
T ss_dssp             EETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEe
Confidence            69999999999999999999999999999999999999999876  5679999999999999999999999999999999


Q ss_pred             EEccccCCC-CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           81 INNAGIMFC-PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      |||||+..+ ..+.+.++|++++++|+.+++++++.++|+|.+++     +++||++||.++..+               
T Consensus        93 vnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~g~Ii~isS~~~~~~---------------  152 (255)
T d1fmca_          93 VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-----GGVILTITSMAAENK---------------  152 (255)
T ss_dssp             EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTCC---------------
T ss_pred             eeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-----ccccccccccchhcc---------------
Confidence            999998755 33678899999999999999999999999999886     689999999998763               


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      .++..+|++||+|+.+|+|++|.|++++|  ||||+|+||+++|++....   .....+.+..|..++.+|+|+|+.++|
T Consensus       153 ~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~f  230 (255)
T d1fmca_         153 NINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALF  230 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHH
T ss_pred             ccccccchhHHHHHHHHHHHHHHHhCccC--eEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            67788999999999999999999999999  9999999999999987543   223344555677888899999999999


Q ss_pred             HhcCCCccCCCceeec-cCccC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+| +.++++||+.|. |+|+.
T Consensus       231 L~S-~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         231 LCS-PAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             HHS-GGGTTCCSCEEEESTTSC
T ss_pred             HhC-chhcCCcCCEEEECcCcc
Confidence            997 899999999887 67664

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.5e-50  Score=332.97  Aligned_cols=228  Identities=24%  Similarity=0.294  Sum_probs=204.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++     +.++.++.+|++|+++++++++++.+.+++||+|
T Consensus         8 lITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           8 LVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            69999999999999999999999999999999999988887     3467889999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||.....  .+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+              
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~II~isS~~~~~~--------------  143 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-----HGRIITIGSVVGTMG--------------  143 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC--------------
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-----CCEeeeecchhhcCC--------------
Confidence            9999987553  4778899999999999999999999999999876     699999999998874              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .+...+|++||+|+.+|+++++.|++++|  ||||+|+||+++|+|......  ...+.+..|..++.+|+|+|+.++|
T Consensus       144 -~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f  220 (243)
T d1q7ba_         144 -NGGQANYAAAKAGLIGFSKSLAREVASRG--ITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAF  220 (243)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence             67788999999999999999999999999  999999999999999776522  2233444577788899999999999


Q ss_pred             HhcCCCccCCCceeec-cCcc
Q 023054          237 VALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+| +.++++||+.|. |+|+
T Consensus       221 L~S-~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         221 LAS-DEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHS-GGGTTCCSCEEEESTTS
T ss_pred             HhC-chhcCCcCCeEEECCCe
Confidence            997 889999999887 5654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.8e-50  Score=332.36  Aligned_cols=232  Identities=23%  Similarity=0.274  Sum_probs=205.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|+++ .|+++.++++.+++...  +.++.++++|++|+++++++++++.+.++++|+
T Consensus         5 lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           5 VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            699999999999999999999999987 46778888888888766  568999999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||....  ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+             
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~IVnisS~~~~~~-------------  144 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-----KGRIINIASVVGLIG-------------  144 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC-------------
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-----CcEEEEEcChhhcCC-------------
Confidence            9999998755  34788899999999999999999999999999876     799999999998874             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                        .++..+|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.....  .........|..++.+|+|+|+.++
T Consensus       145 --~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~  220 (244)
T d1edoa_         145 --NIGQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVE  220 (244)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHH
T ss_pred             --CCCCHHHHHHHHHHHHChHHHHHHHhhhC--cEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              67789999999999999999999999999  99999999999999977652  2233344467778889999999999


Q ss_pred             HHhcCCCccCCCceeec-cCcc
Q 023054          236 YVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ||+.+++++++||+.|. |+|.
T Consensus       221 fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         221 FLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHCCchhcCCcCCeEEeCCCe
Confidence            99744899999999887 5554

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=8.9e-50  Score=333.29  Aligned_cols=232  Identities=22%  Similarity=0.252  Sum_probs=205.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++.+++||++|+++++++++++.+.+|+||+|
T Consensus         5 lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           5 LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            69999999999999999999999999999999999999999876  5689999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++.    .++||++||..+..+              
T Consensus        83 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~----~g~Iv~isS~~~~~~--------------  144 (255)
T d1gega_          83 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH----GGKIINACSQAGHVG--------------  144 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSC--------------
T ss_pred             EecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcc----ccccccccchhhccc--------------
Confidence            999998754  347888999999999999999999999998877642    578999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------------HHHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------------VVMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~~~~~~~~~~~  225 (288)
                       .+....|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.....             ....+.+.+|..++.
T Consensus       145 -~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~  221 (255)
T d1gega_         145 -NPELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLS  221 (255)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCB
T ss_pred             -CcccccchhCHHHHHhhHHHHHHHhhhhC--cEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCc
Confidence             67889999999999999999999999999  99999999999999865431             112233445677888


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +|+|+|+.++||+| ++++++||+.|. |+|+
T Consensus       222 ~peevA~~v~fL~S-~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         222 EPEDVAACVSYLAS-PDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESSSS
T ss_pred             CHHHHHHHHHHHhC-chhCCccCcEEEecCCE
Confidence            99999999999998 899999999887 5654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.2e-49  Score=333.65  Aligned_cols=233  Identities=23%  Similarity=0.253  Sum_probs=200.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+ .+.++++.+++...+ +.++.++++|++|+++++++++++.+.+|+||+
T Consensus         8 lITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   86 (260)
T d1x1ta1           8 VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDI   86 (260)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcE
Confidence            699999999999999999999999999997 566778887776654 567999999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||.++..+             
T Consensus        87 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~G~Iv~isS~~~~~~-------------  148 (260)
T d1x1ta1          87 LVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-----FGRIINIASAHGLVA-------------  148 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------------
T ss_pred             EEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-----CceEeecccccceec-------------
Confidence            9999998755  34778899999999999999999999999999876     699999999998873             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--------------HHHHHHHHHhhh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--------------VMRFLKFFSFFL  223 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--------------~~~~~~~~~~~~  223 (288)
                        .+...+|++||+|+.+|+++++.|++++|  |+||+|+||+++|+|......              ...+.+..|..+
T Consensus       149 --~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R  224 (260)
T d1x1ta1         149 --SANKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ  224 (260)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------------------------CHHHHCTTCC
T ss_pred             --cCCcchhhhhhhhHHHhHHHHHHHhchhC--cEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCC
Confidence              67778999999999999999999999999  999999999999999764310              111344567788


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +.+|+|+|+.++||+| +.++++||+.|. |+|++
T Consensus       225 ~g~pediA~~v~fL~S-~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         225 FVTPEQLGGTAVFLAS-DAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhC-hhhCCCcCCEEEECcchh
Confidence            8999999999999997 899999999887 66653

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=3.3e-49  Score=330.28  Aligned_cols=233  Identities=23%  Similarity=0.302  Sum_probs=206.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC-Ccce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL-PLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++...  +.++.++.+|++|+++++++++++.+.++ ++|+
T Consensus        12 lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idi   89 (259)
T d2ae2a_          12 LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVANHFHGKLNI   89 (259)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceE
Confidence            69999999999999999999999999999999999999998876  56889999999999999999999988876 7999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++++++|+.+++++++.++|+|.++.     .|+||++||..+..+             
T Consensus        90 lvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~Ii~isS~~~~~~-------------  151 (259)
T d2ae2a_          90 LVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-----RGNVVFISSVSGALA-------------  151 (259)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-----SEEEEEECCGGGTSC-------------
T ss_pred             EEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-----ccccccccccccccc-------------
Confidence            9999998754  34788899999999999999999999999999876     799999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------HHHHHHHHHHhhhcCChHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------VVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  230 (288)
                        .+....|++||+|+.+|+|+++.|++++|  ||||+|+||+++|+|.+...       ....+....|..++.+|+|+
T Consensus       152 --~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedv  227 (259)
T d2ae2a_         152 --VPYEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKEL  227 (259)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHH
T ss_pred             --cccccchHHHHHHHHHHHHHHHHHhCcCc--eEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHH
Confidence              67778999999999999999999999999  99999999999999864321       11223344577788999999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCccCC
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      |+.++||+| +.++++||+.|. |+|+..
T Consensus       228 A~~v~fL~S-~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         228 AAMVAFLCF-PAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhC-chhCCCcCcEEEECCCeEe
Confidence            999999997 899999999887 666643

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.4e-49  Score=332.59  Aligned_cols=231  Identities=23%  Similarity=0.286  Sum_probs=204.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++...  +.++.++++|++|+++++++++++.+.+++||+|
T Consensus         6 lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (257)
T d2rhca1           6 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVL   83 (257)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            69999999999999999999999999999999999999999776  5679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHH--HHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDT--MNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+  |.+++     .|+||+++|..+..+            
T Consensus        84 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-----~g~Ii~i~S~~~~~~------------  146 (257)
T d2rhca1          84 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-----TGRIVNIASTGGKQG------------  146 (257)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-----EEEEEEECCGGGTSC------------
T ss_pred             EecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-----Ccccccccccccccc------------
Confidence            999998755  347788999999999999999999999997  44544     589999999998763            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------------hHHHHHHHHHHhhh
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------------AVVMRFLKFFSFFL  223 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~~  223 (288)
                         .+...+|++||+|+.+|+|+|+.|++++|  ||||+|+||+++|+|....             .....+.+.+|..+
T Consensus       147 ---~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR  221 (257)
T d2rhca1         147 ---VVHAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGR  221 (257)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSS
T ss_pred             ---cccchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCC
Confidence               67789999999999999999999999999  9999999999999986543             11222334456778


Q ss_pred             cCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          224 WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      +.+|+|+|+.++||+| +.++++||+.|. |+|.
T Consensus       222 ~~~pedia~~v~fL~S-~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         222 YVQPSEVAEMVAYLIG-PGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             CBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhC-chhcCCcCceEEECcCc
Confidence            8899999999999997 899999999887 5553

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3e-49  Score=330.37  Aligned_cols=233  Identities=23%  Similarity=0.233  Sum_probs=184.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-CCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-LPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++...  +.++.++.||++++++++++++++.+.+ +++|+
T Consensus        12 lVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idi   89 (259)
T d1xq1a_          12 LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDI   89 (259)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHHHHhCCCccc
Confidence            69999999999999999999999999999999999999998876  4679999999999999999999999887 68999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+...  ..+.+.++|++.+++|+.+++++++.++|+|.+++     .|+||++||..+..+             
T Consensus        90 lvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~G~Iv~isS~~~~~~-------------  151 (259)
T d1xq1a_          90 LINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-----CGNIIFMSSIAGVVS-------------  151 (259)
T ss_dssp             EEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SCEEEEEC--------------------
T ss_pred             ccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-----ccccccccccccccc-------------
Confidence            9999998754  34778899999999999999999999999999876     699999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh---HHHHHHHHHHhhhcCChHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA---VVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                        .+...+|++||+|+.+|+++++.|++++|  ||||+|+||+++|+|.....   .........|..++.+|+|+|+.+
T Consensus       152 --~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  227 (259)
T d1xq1a_         152 --ASVGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLV  227 (259)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC-------------------------CCGGGGHHHH
T ss_pred             --ccccccccccccchhhhhHHHHHHhcccC--eEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence              56778899999999999999999999999  99999999999999987542   223344567888889999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCccCC
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      +||+| +.++++||+.|. |+|+..
T Consensus       228 ~fL~S-~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         228 AFLCM-PAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             HHHTS-GGGTTCCSCEEECCCCEEE
T ss_pred             HHHhC-chhcCCcCcEEEeCCCEEC
Confidence            99997 899999999887 666543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.8e-49  Score=328.38  Aligned_cols=227  Identities=21%  Similarity=0.239  Sum_probs=202.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++     +.++.++++|++|+++++++++++.+.++++|+|
T Consensus        10 lITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_          10 LVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            69999999999999999999999999999999998888776     3468899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++++++.++|+|.++.     .|+||++||..+..+              
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~Ii~isS~~~~~~--------------  145 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-----RGSIINISSIEGLAG--------------  145 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--------------
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-----cceEEeccccccccc--------------
Confidence            999998754  34778899999999999999999999999999876     799999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .+...+|++||+|+.+|+|+++.|++++|  ||||+|+||+++|+|....+.   .....|..++.+|+|+|+.++||+
T Consensus       146 -~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~---~~~~~pl~R~~~p~diA~~v~fL~  219 (244)
T d1nffa_         146 -TVACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDWVPE---DIFQTALGRAAEPVEVSNLVVYLA  219 (244)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGTTSCT---TCSCCSSSSCBCHHHHHHHHHHHH
T ss_pred             -cccccchhhHHHHHHHHHHHHHHHhcccC--EEEEEEeeCCccChhHhhhhH---HHHhccccCCCCHHHHHHHHHHHh
Confidence             67789999999999999999999999999  999999999999999765421   122346677889999999999999


Q ss_pred             cCCCccCCCceeec-cCccCC
Q 023054          239 LHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       239 ~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      + ++++++||+.|. |+|++.
T Consensus       220 s-~~s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         220 S-DESSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             S-GGGTTCCSCEEEESTTGGG
T ss_pred             C-hhhCCCcCCEEEECCCeec
Confidence            7 899999999777 677654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=6.7e-49  Score=328.45  Aligned_cols=236  Identities=22%  Similarity=0.241  Sum_probs=205.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh-HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM-AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|+. +.++++.+++...  +.++.++++|++|+++++++++++.+.+++||+
T Consensus        11 lITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   88 (261)
T d1geea_          11 VITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV   88 (261)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            6999999999999999999999999999975 5677788888765  568999999999999999999999999999999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||+..+  ..+.+.++|++.+++|+.++++++++++|+|.+++.    +++||++||..+..+             
T Consensus        89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~----g~~Iv~isS~~~~~~-------------  151 (261)
T d1geea_          89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI----KGTVINMSSVHEKIP-------------  151 (261)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC----CCEEEEECCGGGTSC-------------
T ss_pred             eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccc----cccccccccchhccc-------------
Confidence            9999998755  347888999999999999999999999999988652    346999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                        .+...+|++||+|+.+|+++|+.|++++|  ||||+|+||+++|++.....    ......+..|..++.+|+|+|+.
T Consensus       152 --~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~  227 (261)
T d1geea_         152 --WPLFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAV  227 (261)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             --CccccccccCCccchhhHHHHHHHhhhhC--cEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence              67788999999999999999999999999  99999999999999975431    12223334577888899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCccCCCC
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNEMPPS  260 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~~~~~  260 (288)
                      ++||+| +.++++||+.|. |+|+...+
T Consensus       228 v~fL~S-~~s~~itG~~i~vDGG~sl~p  254 (261)
T d1geea_         228 AAWLAS-SEASYVTGITLFADGGMTLYP  254 (261)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESTTGGGCG
T ss_pred             HHHHhC-chhcCCcCCeEEECCCeeCCC
Confidence            999997 899999999887 77765543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=8.4e-49  Score=325.58  Aligned_cols=230  Identities=27%  Similarity=0.309  Sum_probs=189.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|++.+.  ....++..  +.++.+++||++|+++++++++++.+.+|+||+|
T Consensus         9 lVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDil   84 (247)
T d2ew8a1           9 VITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDIL   84 (247)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999999999999999987532  22333333  5689999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+              
T Consensus        85 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~Iv~isS~~~~~~--------------  145 (247)
T d2ew8a1          85 VNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-----WGRIINLTSTTYWLK--------------  145 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGGSC--------------
T ss_pred             EECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-----CCCccccccchhccc--------------
Confidence            999998754  34788899999999999999999999999999876     699999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHH----HHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK----FFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~  234 (288)
                       .+...+|++||+|+.+|+++++.|++++|  ||||+|+||+++|++............    ..+..++.+|+|+|+.+
T Consensus       146 -~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v  222 (247)
T d2ew8a1         146 -IEAYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAA  222 (247)
T ss_dssp             -CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHH
T ss_pred             -CcccccchhhhccHHHHHHHHHHHhcccC--eEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHH
Confidence             67778999999999999999999999999  999999999999999875422211111    12445677999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCccC
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +||+| +.++++||+.|. |+|++
T Consensus       223 ~fL~S-~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         223 AFLAS-DDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             HHHTS-GGGTTCCSCEEEESSSCC
T ss_pred             HHHhC-chhcCCcCCeEEECCCEe
Confidence            99997 889999999887 66654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=5.6e-49  Score=329.21  Aligned_cols=229  Identities=19%  Similarity=0.210  Sum_probs=204.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++...  +.++.++.||++|+++++++++++.+.++++|+|
T Consensus         9 lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   86 (260)
T d1zema1           9 LVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFL   86 (260)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCee
Confidence            69999999999999999999999999999999999999998776  5679999999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.++++++++++|+|.++.     .|+||++||..+..+             
T Consensus        87 VnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-----~G~II~isS~~~~~~-------------  148 (260)
T d1zema1          87 FNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-----YGRIVNTASMAGVKG-------------  148 (260)
T ss_dssp             EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHSC-------------
T ss_pred             hhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-----CCCCCeeechhhccC-------------
Confidence            999997643   34788899999999999999999999999998876     799999999998874             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC------------------hHHHHHHHHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS------------------AVVMRFLKFF  219 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~------------------~~~~~~~~~~  219 (288)
                        .+...+|++||+|+.+|+|+++.|++++|  ||||+|+||+++|++....                  .....+...+
T Consensus       149 --~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (260)
T d1zema1         149 --PPNMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV  224 (260)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred             --CcchHHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC
Confidence              67788999999999999999999999999  9999999999999975321                  1122334456


Q ss_pred             HhhhcCChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          220 SFFLWKNVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       220 ~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      |..++.+|+|+|+.++||+| +.++++||+.|..+
T Consensus       225 Pl~R~g~pedvA~~v~fL~S-~~s~~itG~~i~VD  258 (260)
T d1zema1         225 PMRRYGDINEIPGVVAFLLG-DDSSFMTGVNLPIA  258 (260)
T ss_dssp             TTSSCBCGGGSHHHHHHHHS-GGGTTCCSCEEEES
T ss_pred             CCCCCcCHHHHHHHHHHHhC-chhcCccCCeEEeC
Confidence            77888899999999999998 89999999988743

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3e-48  Score=324.05  Aligned_cols=228  Identities=21%  Similarity=0.265  Sum_probs=202.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.++++.+++     +.++.+++||++|+++++++++++.+++++||+|
T Consensus         9 lVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           9 LITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            69999999999999999999999999999999999888877     5678999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|.|.++.+    .|+||++||..+..+              
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~----~g~Iv~isS~~~~~~--------------  145 (256)
T d1k2wa_          84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGR----GGKIINMASQAGRRG--------------  145 (256)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSC--------------
T ss_pred             EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhcc----CCccccccchhhccc--------------
Confidence            999998754  347788999999999999999999999998766532    689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------------hHHHHHHHHHHhhhcC
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------------AVVMRFLKFFSFFLWK  225 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------------~~~~~~~~~~~~~~~~  225 (288)
                       .+...+|++||+|+.+|+++++.|++++|  ||||+|+||+++|++....             .....+...+|..++.
T Consensus       146 -~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~  222 (256)
T d1k2wa_         146 -EALVGVYCATKAAVISLTQSAGLNLIRHG--INVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMG  222 (256)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCB
T ss_pred             -cccccchhhhhhHHHHHHHHHHHHhcccC--eEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCc
Confidence             67789999999999999999999999999  9999999999999986533             1223344556788889


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      +|+|+|+.++||+| ++++++||+.|. |+|
T Consensus       223 ~p~evA~~v~fL~S-~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         223 RAEDLTGMAIFLAT-PEADYIVAQTYNVDGG  252 (256)
T ss_dssp             CHHHHHHHHHHTTS-GGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhC-chhCCccCceEEECcc
Confidence            99999999999997 899999999887 554

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.9e-49  Score=330.14  Aligned_cols=233  Identities=21%  Similarity=0.158  Sum_probs=202.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++++++++++++++.++++++|+|
T Consensus         9 lVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           9 IITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            69999999999999999999999999999999888777665     4578999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+....  .+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+              
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-----~G~II~isS~~~~~~--------------  144 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-----GGSIVNISSAAGLMG--------------  144 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--------------
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-----CCeecccccchhccc--------------
Confidence            9999987553  4778899999999999999999999999999876     799999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcC-ChHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWK-NVPQGAATTC  235 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~-~~~~~a~~~~  235 (288)
                       .+...+|++||+|+.+|+|+|+.|++++|  ||||+|+||+++|+|.....  ......+..|..++. .|+|+|+.++
T Consensus       145 -~~~~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~  221 (254)
T d1hdca_         145 -LALTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVV  221 (254)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred             -ccchhhHHHHHHHHHHHHHHHHHHhCCCc--eEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence             67788999999999999999999999999  99999999999999864321  111122234555565 6999999999


Q ss_pred             HHhcCCCccCCCceeec-cCccCCCCc
Q 023054          236 YVALHPNLKGVTGKYFL-DCNEMPPSA  261 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~~~~~~  261 (288)
                      ||+| ++++++||+.|. |+|++..+.
T Consensus       222 fL~S-~~a~~itG~~i~vDGG~t~gp~  247 (254)
T d1hdca_         222 KLLS-DTSSYVTGAELAVDGGWTTGPT  247 (254)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTTTTSCC
T ss_pred             HHhc-hhhCCCCCceEEeCCCccCCCC
Confidence            9997 899999999887 777766543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.7e-48  Score=320.58  Aligned_cols=227  Identities=19%  Similarity=0.224  Sum_probs=198.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++       +.++++||++|+++++++++++.+.+++||+|
T Consensus         9 lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           9 LITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            69999999999999999999999999999999888776543       46788999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+..+  ..+.+.++|++.+++|+.++++++|+++|+|.+++     .++|+++||.. ..               
T Consensus        82 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~~~i~~~ss~~-~~---------------  140 (242)
T d1ulsa_          82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-----PGSIVLTASRV-YL---------------  140 (242)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-----CEEEEEECCGG-GG---------------
T ss_pred             EECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-----cceeeeecccc-cc---------------
Confidence            999998755  34788899999999999999999999999998865     56777777754 33               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      +.++..+|++||+|+.+|+++++.|++++|  ||||+|+||+++|++.....  .........|..++.+|+|+|+.++|
T Consensus       141 ~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~f  218 (242)
T d1ulsa_         141 GNLGQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALF  218 (242)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            366778999999999999999999999999  99999999999999987663  23334555678888899999999999


Q ss_pred             HhcCCCccCCCceeec-cCccCC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      |+| ++++++||+.|. |+|+..
T Consensus       219 L~S-~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         219 LLS-DESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             HHS-GGGTTCCSCEEEESTTTTT
T ss_pred             Hhc-hhhCCCCCcEEEECCCccC
Confidence            998 899999999887 676653

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=8.8e-49  Score=326.22  Aligned_cols=232  Identities=23%  Similarity=0.220  Sum_probs=202.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++..   +.++.++++|++|+++++++++++.+.+|+||+|
T Consensus        10 lVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   86 (251)
T d1zk4a1          10 IITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL   86 (251)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEE
Confidence            6999999999999999999999999999999999988888753   4579999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.++++++++++|+|.+++.    +++||++||..+..+              
T Consensus        87 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~----gg~Ii~isS~~~~~~--------------  148 (251)
T d1zk4a1          87 VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL----GASIINMSSIEGFVG--------------  148 (251)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS----CEEEEEECCGGGTSC--------------
T ss_pred             EeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCC----CCceEeeeccceecc--------------
Confidence            999998754  347888999999999999999999999999987642    358999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHh--cccCCceEEEEeeCCcccCCCCCCChHHHH---HHHHHHhhhcCChHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRF--QEEGVNITANSVHPGLIMTNLFKHSAVVMR---FLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~--~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~  233 (288)
                       .+...+|++||+|+.+|++++|.|+  +++|  ||||+|+||+++|+|.........   .....|..++.+|+|+|+.
T Consensus       149 -~~~~~~Y~asKaal~~lt~~lA~e~~l~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~  225 (251)
T d1zk4a1         149 -DPSLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYI  225 (251)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHH
T ss_pred             -CCCchhHHHHHHHHhcchHHHHHHHhcCCCc--EEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence             6777899999999999999999994  5677  999999999999999766532222   2223567778899999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCccC
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ++||+| ++++++||+.|. |+|++
T Consensus       226 v~fL~S-~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         226 CVYLAS-NESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHhC-chhCCCcCcEEEECcccc
Confidence            999997 899999999887 66653

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.6e-48  Score=325.27  Aligned_cols=235  Identities=23%  Similarity=0.268  Sum_probs=195.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC-CCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED-DTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+++.++++.+++...+ +..++.++++|+++.++++++++++.+.++++|+
T Consensus         9 lVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   88 (264)
T d1spxa_           9 IITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDI   88 (264)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            699999999999999999999999999999999999999998763 3456999999999999999999999999999999


Q ss_pred             EEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           80 LINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        80 lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      ||||||+..+      ..+.+.++|++.+++|+.++++++++++|+|+++      .|++|+++|..+...         
T Consensus        89 lvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~S~~~~~~---------  153 (264)
T d1spxa_          89 LVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST------KGEIVNISSIASGLH---------  153 (264)
T ss_dssp             EEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTTSSSS---------
T ss_pred             eecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc------cCcceeeeeeccccc---------
Confidence            9999998643      2245678899999999999999999999999876      477888877764321         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----------HHHHHHHHHHhh
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----------VVMRFLKFFSFF  222 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----------~~~~~~~~~~~~  222 (288)
                           +.+....|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.....           ......+.+|..
T Consensus       154 -----~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~  226 (264)
T d1spxa_         154 -----ATPDFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG  226 (264)
T ss_dssp             -----CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS
T ss_pred             -----cCCCchhhhhhhhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC
Confidence                 366778899999999999999999999999  99999999999999876441           112233445778


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ++.+|+|+|+.++||+|.+.++|+||+.|. |+|+.
T Consensus       227 R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         227 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            889999999999999974458999999887 66653

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-48  Score=323.63  Aligned_cols=226  Identities=21%  Similarity=0.264  Sum_probs=196.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++      .++.++.||++|+++++++++++.+++++||+|
T Consensus        10 lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1          10 VVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999998888776654      357889999999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.++++++++++|+|+++      +|+||++||..+..+             
T Consensus        84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~Ii~isS~~~~~~-------------  144 (250)
T d1ydea1          84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAIG-------------  144 (250)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHHC-------------
T ss_pred             EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC------CCCCccccccccccc-------------
Confidence            999997543   2367889999999999999999999999999865      589999999998874             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hHHHHHHHHHHhhhcCChHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AVVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~  229 (288)
                        .+...+|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.+..        ..........|..++.+|+|
T Consensus       145 --~~~~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~e  220 (250)
T d1ydea1         145 --QAQAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAE  220 (250)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHH
T ss_pred             --ccCcchhHHHHhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHH
Confidence              67778999999999999999999999999  9999999999999986432        11222333346778889999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +|+.++||++ + ++++||+.|. |+|..
T Consensus       221 va~~v~fL~S-d-a~~itG~~i~vDGG~~  247 (250)
T d1ydea1         221 VGAAAVFLAS-E-ANFCTGIELLVTGGAE  247 (250)
T ss_dssp             HHHHHHHHHH-H-CTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHhC-c-cCCCcCCeEEECCCcc
Confidence            9999999997 5 7899999877 66654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.3e-47  Score=322.53  Aligned_cols=236  Identities=21%  Similarity=0.241  Sum_probs=201.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++...   .++.++.||++|+++++++++++.+.++++|+|
T Consensus        10 lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   86 (268)
T d2bgka1          10 IITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM   86 (268)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC---CceEEEEccCCCHHHHHHHHHHHHHHcCCccee
Confidence            69999999999999999999999999999999999998888543   458889999999999999999999999999999


Q ss_pred             EEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           81 INNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        81 v~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      |||||+...    ..+.+.++|++.+++|+.++++++|+++|+|.+++     .|+||++||..+..+            
T Consensus        87 VnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~g~ii~iss~~~~~~------------  149 (268)
T d2bgka1          87 FGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-----KGSIVFTASISSFTA------------  149 (268)
T ss_dssp             EECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-----CEEEEEECCGGGTCC------------
T ss_pred             ccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-----CCCcccccccccccc------------
Confidence            999998643    23667789999999999999999999999998876     689999999988763            


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-----HHHHHHHH--HHhhhcCChHH
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-----VVMRFLKF--FSFFLWKNVPQ  229 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-----~~~~~~~~--~~~~~~~~~~~  229 (288)
                        +......|++||+|+.+|+++++.||+++|  ||||+|+||+++|+|.....     ........  .+..++.+|+|
T Consensus       150 --~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~ped  225 (268)
T d2bgka1         150 --GEGVSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAED  225 (268)
T ss_dssp             --CTTSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHH
T ss_pred             --ccccccccchhHHHHHhCHHHHHHHhChhC--eEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHH
Confidence              122335799999999999999999999999  99999999999999976541     11111111  13456789999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCccCCCCc
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNEMPPSA  261 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~~~~  261 (288)
                      +|+.++||+| +++.++||+.|. |+|++...+
T Consensus       226 vA~~v~fL~S-~~s~~itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         226 VADAVAYLAG-DESKYVSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTGGGCCT
T ss_pred             HHHHHHHHhC-hhhCCccCceEEECcCcccCCC
Confidence            9999999997 899999999887 777765443

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.3e-48  Score=322.79  Aligned_cols=226  Identities=20%  Similarity=0.218  Sum_probs=195.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++..+ ..+++       ...+++||++|.++++++++++.+.+|+||+|
T Consensus         9 lITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           9 LVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-------GGAFFQVDLEDERERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-------TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-------CCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeE
Confidence            69999999999999999999999999999987543 33333       24578999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+..+  ..+.+.++|++.+++|+.++++++++++|+|++++     .|+||++||..+..+              
T Consensus        81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-----~G~Ii~isS~~~~~~--------------  141 (248)
T d2d1ya1          81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-----GGAIVNVASVQGLFA--------------  141 (248)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-----CEEEEEECCGGGTSB--------------
T ss_pred             EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-----ccccccccccccccc--------------
Confidence            999998755  34778899999999999999999999999999876     699999999998764              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hHHHHHHHHHHhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AVVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  230 (288)
                       .+...+|++||+|+.+|+++++.|++++|  ||||+|+||+++|++....        .....+....|..++.+|+|+
T Consensus       142 -~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedi  218 (248)
T d2d1ya1         142 -EQENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEV  218 (248)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHH
T ss_pred             -ccccchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHH
Confidence             77889999999999999999999999999  9999999999999976432        111223334567778899999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+.++||++ ++++++||+.|. |+|++
T Consensus       219 a~~v~fL~S-~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         219 AEAVLFLAS-EKASFITGAILPVDGGMT  245 (248)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhC-chhcCCCCcEEEcCcCcc
Confidence            999999997 899999999777 67664

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.8e-48  Score=324.60  Aligned_cols=230  Identities=23%  Similarity=0.229  Sum_probs=198.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++     +.+..++++|++|.++++++++++.++++++|+|
T Consensus        10 lITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_          10 LVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            69999999999999999999999999999999999888877     5678899999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+..+  ..+.+.++|++.+++|+.++++++++++|+|+++      +|+||++||..+..+              
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~------~G~Iv~isS~~~~~~--------------  144 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET------GGSIINMASVSSWLP--------------  144 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------CEEEEEECCGGGTSC--------------
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc------CCceecccchhhhcC--------------
Confidence            999998755  3477889999999999999999999999999654      589999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHH----HHHhhhcCChHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLK----FFSFFLWKNVPQGA  231 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~----~~~~~~~~~~~~~a  231 (288)
                       .+...+|++||+|+.+|+++++.|++++|.+||||+|+||+++|++....   ........    ..+..++.+|+|+|
T Consensus       145 -~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA  223 (253)
T d1hxha_         145 -IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIA  223 (253)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHH
T ss_pred             -ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHH
Confidence             67788999999999999999999999865569999999999999985421   00111111    11334567899999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCccC
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +.++||+| ++++++||+.|. |+|+.
T Consensus       224 ~~v~fL~S-~~s~~itG~~i~VDGG~~  249 (253)
T d1hxha_         224 QLVLFLAS-DESSVMSGSELHADNSIL  249 (253)
T ss_dssp             HHHHHHHS-GGGTTCCSCEEEESSSCT
T ss_pred             HHHHHHhC-hhhCCCcCcEEEECccHh
Confidence            99999997 899999999877 66654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-47  Score=323.26  Aligned_cols=254  Identities=20%  Similarity=0.267  Sum_probs=214.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC---CCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED---DTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |||||++|||+++|+.|+++|++|++++|+.++++++.+++....   .+.++.++.||++|+++++++++++.+.++++
T Consensus        16 lITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   95 (297)
T d1yxma1          16 IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKI   95 (297)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCe
Confidence            699999999999999999999999999999999999999987643   25689999999999999999999999999999


Q ss_pred             ceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           78 NILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        78 d~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      |+||||||+...  ..+.+.++|++.+++|+.++++++++++|.|.+++     .++||++||....             
T Consensus        96 DiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~g~Ii~~ss~~~~-------------  157 (297)
T d1yxma1          96 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-----GGSIVNIIVPTKA-------------  157 (297)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-----CEEEEEECCCCTT-------------
T ss_pred             EEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-----ccccccccccccc-------------
Confidence            999999998654  34778899999999999999999999999999887     7889988765432             


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC------hHHHHHHHHHHhhhcCChHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS------AVVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~  229 (288)
                         +.+....|++||+|+.+|+|++|.|++++|  ||||+|+||+++|++....      .......+.+|..++.+|+|
T Consensus       158 ---~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~ped  232 (297)
T d1yxma1         158 ---GFPLAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEE  232 (297)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHH
T ss_pred             ---cccccccchhHHHHHHHHHHHHHHHhcccC--ceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHH
Confidence               366778999999999999999999999999  9999999999999986433      11223334467788889999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCccCCC------------CccccCHHHHHHHHHHHHH
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNEMPP------------SALARDETLAKKLWDFSNK  278 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~  278 (288)
                      +|+.++||+| +.++++||+.|. |+|+...            +....+.+..+++|+-.++
T Consensus       233 vA~~v~fL~S-d~s~~iTG~~i~VDGG~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (297)
T d1yxma1         233 VSSVVCFLLS-PAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKE  293 (297)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTGGGCBTTCCCCCCSCCCCCSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhC-chhcCcCCcEEEeCcChhhhcCCCCCCCcccccccCCchHHHHHHhHhhHH
Confidence            9999999997 899999999887 6665321            2233355777777776554

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=7.3e-47  Score=315.67  Aligned_cols=233  Identities=24%  Similarity=0.300  Sum_probs=203.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-CCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-LPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++...  +.+++++.||+++.++++++++++.+.+ +.+|+
T Consensus        10 lITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idi   87 (258)
T d1ae1a_          10 LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNI   87 (258)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEE
Confidence            69999999999999999999999999999999999999988776  5678899999999999999999999987 67999


Q ss_pred             EEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||....  ..+.+.++|++++++|+.++++++++++|.|.++.     .|+||++||..+..              
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-----~g~ii~isS~~~~~--------------  148 (258)
T d1ae1a_          88 LVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-----NGNVIFLSSIAGFS--------------  148 (258)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----SEEEEEECCGGGTS--------------
T ss_pred             EeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-----cccccccccccccc--------------
Confidence            9999998765  34778899999999999999999999999999877     79999999999876              


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hHHHHHHHHHHhhhcCChHH
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AVVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~  229 (288)
                       +.+....|+++|+|+++|++.+++|++++|  ||||+|+||+++|+|....        .....+....|..++.+|+|
T Consensus       149 -~~~~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~ped  225 (258)
T d1ae1a_         149 -ALPSVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQE  225 (258)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHH
T ss_pred             -ccccchhHHHHHHHHHHHHHHHHHhcCcCc--EEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHH
Confidence             377889999999999999999999999999  9999999999999987644        22333455567788899999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCccCC
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      +|+.++||+| ++++++||+.|. |+|+..
T Consensus       226 iA~~v~fL~S-~~s~~itG~~i~vDGG~s~  254 (258)
T d1ae1a_         226 VSALIAFLCF-PAASYITGQIIWADGGFTA  254 (258)
T ss_dssp             HHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhC-hhhCCCcCcEEEeCCCeec
Confidence            9999999997 899999999777 676643

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.9e-48  Score=318.71  Aligned_cols=219  Identities=22%  Similarity=0.322  Sum_probs=190.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.             ..++..+++|++|+++++++++++.+.++++|+|
T Consensus        11 lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL   77 (237)
T d1uzma1          11 LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVL   77 (237)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            699999999999999999999999999998643             3457889999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++++++|+.+++++++.++|+|.+++     .|+||++||..+..+              
T Consensus        78 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~g~Iv~isS~~~~~~--------------  138 (237)
T d1uzma1          78 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-----FGRMIFIGSVSGLWG--------------  138 (237)
T ss_dssp             EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCCCC-----------------
T ss_pred             EeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-----CCceEEEcchhhccC--------------
Confidence            999998754  34778899999999999999999999999999876     689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++..+|++||+|+.+|+++++.|++++|  ||||+|+||+++|+|.+...  ......+.+|..++.+|||+|+.++|
T Consensus       139 -~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f  215 (237)
T d1uzma1         139 -IGNQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSF  215 (237)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHH
T ss_pred             -CcccHHHHHHHHHHHHHHHHHHhhhhcCC--ceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence             66788999999999999999999999999  99999999999999876542  22233445677888999999999999


Q ss_pred             HhcCCCccCCCceeec-cCc
Q 023054          237 VALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~  255 (288)
                      |++ ++++++||+.|. |+|
T Consensus       216 L~S-~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         216 LAS-EDASYISGAVIPVDGG  234 (237)
T ss_dssp             HHS-GGGTTCCSCEEEESTT
T ss_pred             HhC-chhcCCcCCeEEECCC
Confidence            997 899999999887 554

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=3e-47  Score=318.94  Aligned_cols=241  Identities=21%  Similarity=0.271  Sum_probs=205.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+++++..+++.+.+ +.++.+++||++|+++++++++++.+.++++|+|
T Consensus        13 lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   91 (260)
T d1h5qa_          13 IVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGL   91 (260)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEe
Confidence            699999999999999999999999999999999988888886654 5679999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++++++.++|+|.++..    .++|++++|...........        .
T Consensus        92 VnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~----~g~i~~~~s~~~~~~~~~~~--------~  159 (260)
T d1h5qa_          92 IANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ----KGSIVVTSSMSSQIINQSSL--------N  159 (260)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSCCEEET--------T
T ss_pred             cccccccccCCHHHhccccccccccccccchhhhhhhhccccccccc----ceEEEEeecccccccccccc--------c
Confidence            999998654  347888999999999999999999999999976542    57888888876554211110        1


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                      +.++..+|+++|+|+.+|+|+++.|++++|  ||||+|+||+++|++.....  ........+|..++.+|+|+|+.++|
T Consensus       160 ~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~f  237 (260)
T d1h5qa_         160 GSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAIL  237 (260)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred             cCccccchhhhhhhHHHHHHHHHHHhchhC--eEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            234567899999999999999999999999  99999999999999987653  22334455677888999999999999


Q ss_pred             HhcCCCccCCCceeec-cCccC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+| ++++++||+.|. |+|+.
T Consensus       238 L~S-~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         238 LLS-DHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             HHS-GGGTTCCSCEEEECTTGG
T ss_pred             Hhc-chhCCCcCceEEECCCee
Confidence            997 899999999877 77664

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.6e-47  Score=322.60  Aligned_cols=234  Identities=22%  Similarity=0.236  Sum_probs=197.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC-CCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED-DTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++.+.+ ++.++.+++||++|+++++++++++.+.++++|+
T Consensus         9 lVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   88 (272)
T d1xkqa_           9 IITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDV   88 (272)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence            699999999999999999999999999999999999999998753 3457999999999999999999999999999999


Q ss_pred             EEEccccCCCC------CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc-ccccccCCcccc
Q 023054           80 LINNAGIMFCP------YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA-HQYTYKGGIRFQ  152 (288)
Q Consensus        80 lv~~ag~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~-~~~~~~~~~~~~  152 (288)
                      ||||||...+.      .+.+.+.|++++++|+.++++++++++|+|.++      +|++|+++|.. +..         
T Consensus        89 lvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~------~g~iI~~~Ss~a~~~---------  153 (272)
T d1xkqa_          89 LVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS------KGEIVNVSSIVAGPQ---------  153 (272)
T ss_dssp             EEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSS---------
T ss_pred             EEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc------CCccccccchhcccc---------
Confidence            99999987542      134455799999999999999999999999876      36777777754 443         


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HHHH-------HHHHHh
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VMRF-------LKFFSF  221 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~-------~~~~~~  221 (288)
                            +.+....|++||+|+.+|+++|+.|++++|  ||||+|+||+|+|+|......    ....       .+.+|.
T Consensus       154 ------~~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  225 (272)
T d1xkqa_         154 ------AQPDFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI  225 (272)
T ss_dssp             ------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT
T ss_pred             ------CCCCcchhhhHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC
Confidence                  467788999999999999999999999999  999999999999998754311    1111       112456


Q ss_pred             hhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          222 FLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      .++.+|+|+|+.++||+|.+.+.|+||+.|. |+|+.
T Consensus       226 gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~  262 (272)
T d1xkqa_         226 GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  262 (272)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHH
Confidence            7788999999999999973335799999887 66654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.9e-47  Score=322.24  Aligned_cols=235  Identities=20%  Similarity=0.214  Sum_probs=200.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC-CCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED-DTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++.+.+ +..++.++.+|++|+++++++++++.+.+|+||+
T Consensus         8 lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   87 (274)
T d1xhla_           8 IITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDI   87 (274)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceE
Confidence            699999999999999999999999999999999999999998764 3457899999999999999999999999999999


Q ss_pred             EEEccccCCCC----CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           80 LINNAGIMFCP----YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        80 lv~~ag~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ||||||.....    .+.+.++|++.+++|+.++++++++++|+|.+++     .++|+++||.++..            
T Consensus        88 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~g~ii~~ss~~~~~------------  150 (274)
T d1xhla_          88 LVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-----GEIVNVSSIVAGPQ------------  150 (274)
T ss_dssp             EEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEECCGGGSSS------------
T ss_pred             EEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-----cccccchhhhhccc------------
Confidence            99999975432    2346678999999999999999999999998875     67888888877655            


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHH-------HHHHhhhc
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFL-------KFFSFFLW  224 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~-------~~~~~~~~  224 (288)
                         +.++..+|++||+|+.+|+|++|.|++++|  ||||+|+||+++|++.....    ......       +.+|..++
T Consensus       151 ---~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~  225 (274)
T d1xhla_         151 ---AHSGYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHC  225 (274)
T ss_dssp             ---CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSC
T ss_pred             ---cCCCCceehhhhhHHHHHHHHHHHHHhHhC--CceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCC
Confidence               366778999999999999999999999999  99999999999999865431    111111       12467778


Q ss_pred             CChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          225 KNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      .+|+|+|+.++||+|.+.++|+||+.|. |+|..
T Consensus       226 g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         226 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            8999999999999973468999999887 66654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=9.9e-47  Score=311.60  Aligned_cols=219  Identities=21%  Similarity=0.291  Sum_probs=196.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-------EEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            1 MLAGGASGIGLETARVLALRKAH-------VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |||||++|||+++|+.|+++|++       |++++|+++.++++.+++...  +.++.++.||++|+++++++++++.+.
T Consensus         5 lITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           5 LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            69999999999999999999997       999999999999999999876  568999999999999999999999999


Q ss_pred             CCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           74 NLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      +|++|+||||||+...  ..+.+.++|++++++|+.+++++++.++|+|++++     .|+||++||.++..+       
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~G~Ii~isS~~~~~~-------  150 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-----SGHIFFITSVAATKA-------  150 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-----CCceEEEechhhcCC-------
Confidence            9999999999998755  34788899999999999999999999999999876     699999999998874       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a  231 (288)
                              .++...|++||+|+.+|+++|+.|++++|  ||||+|+||+++|+|.......       ...++.+|+|+|
T Consensus       151 --------~~~~~~Y~asK~al~~lt~~la~el~~~g--Irvn~i~PG~v~T~~~~~~~~~-------~~~~~~~PedvA  213 (240)
T d2bd0a1         151 --------FRHSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVDDE-------MQALMMMPEDIA  213 (240)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCCCST-------TGGGSBCHHHHH
T ss_pred             --------CCCChHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEeeeCcccCchhhhcCHh-------hHhcCCCHHHHH
Confidence                    67788999999999999999999999999  9999999999999998765211       123457899999


Q ss_pred             HHHHHHhcCCCccCCCceee
Q 023054          232 ATTCYVALHPNLKGVTGKYF  251 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~  251 (288)
                      +.++|+++ +.+++++|+.+
T Consensus       214 ~~v~~l~s-~~~~~~~~~~~  232 (240)
T d2bd0a1         214 APVVQAYL-QPSRTVVEEII  232 (240)
T ss_dssp             HHHHHHHT-SCTTEEEEEEE
T ss_pred             HHHHHHHc-CCccCccCCEE
Confidence            99999998 56677777644

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-46  Score=313.14  Aligned_cols=228  Identities=21%  Similarity=0.302  Sum_probs=201.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+++++..+++.+..++.++.+++||++|+++++++++++.+.+|++|+|
T Consensus         7 lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil   86 (254)
T d2gdza1           7 LVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDIL   86 (254)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCee
Confidence            69999999999999999999999999999999999999999887777889999999999999999999999999999999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      |||||+.      ..++|++++++|+.+++.+++.++|+|.++..  ..+|+||++||.++..+               .
T Consensus        87 VnnAg~~------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--~~~g~Iv~isS~~~~~~---------------~  143 (254)
T d2gdza1          87 VNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNG--GEGGIIINMSSLAGLMP---------------V  143 (254)
T ss_dssp             EECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTSC---------------C
T ss_pred             ccccccc------ccccchheeeeehhhHHHHHHHHHHHHHHhhc--CCCcEEEeeccHhhccC---------------C
Confidence            9999986      34679999999999999999999999987542  12589999999998774               6


Q ss_pred             CccccchhhHHHHHHHHHH--HHHHhcccCCceEEEEeeCCcccCCCCCCCh----------HHHHHHHHHHhhhcCChH
Q 023054          161 SDKKAYGQSKLANILHANE--LSRRFQEEGVNITANSVHPGLIMTNLFKHSA----------VVMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~--la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~  228 (288)
                      +...+|++||+|+.+|+|+  |+.|++++|  ||||+|+||+++|+|.....          ....+...+|..++.+|+
T Consensus       144 ~~~~~Y~asKaal~~ltrs~ala~e~~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  221 (254)
T d2gdza1         144 AQQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP  221 (254)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHHhcCCC--EEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHH
Confidence            7778999999999999996  788999999  99999999999999875431          233455667888899999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+|+.++||++ ++  ++||+.|. |+|+
T Consensus       222 dvA~~v~fL~s-~~--~itG~~i~VdGG~  247 (254)
T d2gdza1         222 LIANGLITLIE-DD--ALNGAIMKITTSK  247 (254)
T ss_dssp             HHHHHHHHHHH-CT--TCSSCEEEEETTT
T ss_pred             HHHHHHHHHHc-CC--CCCCCEEEECCCC
Confidence            99999999998 43  49999887 5554

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.7e-47  Score=318.93  Aligned_cols=227  Identities=14%  Similarity=0.096  Sum_probs=197.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+.++++..... .       +.++|+++.++++++++++.+.+|+||+|
T Consensus         4 lVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~-------~~~~dv~~~~~~~~~~~~~~~~~G~iDiL   75 (252)
T d1zmta1           4 IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-T-------YPQLKPMSEQEPAELIEAVTSAYGQVDVL   75 (252)
T ss_dssp             EESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-H-------CTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-c-------EEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999888777654332 2       23689999999999999999999999999


Q ss_pred             EEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           81 INNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        81 v~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      |||||+...   ..+.+.++|++.+++|+.++++++++++|+|.+++     .|+||++||..+..+             
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-----~G~IV~isS~~~~~~-------------  137 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-----SGHIIFITSATPFGP-------------  137 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCSTTTSC-------------
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-----cceeecccccccccc-------------
Confidence            999997643   34678899999999999999999999999999876     799999999998763             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----------hHHHHHHHHHHhhhcCCh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----------AVVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~  227 (288)
                        .+...+|++||+|+.+|+|+++.|++++|  ||||+|+||+++|++....          .....+.+..|..++.+|
T Consensus       138 --~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~p  213 (252)
T d1zmta1         138 --WKELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQ  213 (252)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCH
T ss_pred             --cccccccccccccHHHHHHHHHHHhcccC--cEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCH
Confidence              67778999999999999999999999999  9999999999999987654          122334555677888999


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCccCC
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      +|+|+.++||+| ++++|+||+.|. |+|+.-
T Consensus       214 edvA~~v~fL~S-~~s~~iTG~~i~vdGG~~~  244 (252)
T d1zmta1         214 KELGELVAFLAS-GSCDYLTGQVFWLAGGFPM  244 (252)
T ss_dssp             HHHHHHHHHHHT-TSCGGGTTCEEEESTTCCC
T ss_pred             HHHHHHHHHHhC-chhcCCcCCeEEECCCcee
Confidence            999999999997 899999999887 677643

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.2e-47  Score=312.18  Aligned_cols=225  Identities=18%  Similarity=0.298  Sum_probs=194.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++      ..+.++.+|++|+++++++++    ++++||+|
T Consensus         9 lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~----~~g~iDil   78 (242)
T d1cyda_           9 LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG----GIGPVDLL   78 (242)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----TCCCCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH----HcCCCeEE
Confidence            69999999999999999999999999999998887776654      347889999999998877654    56899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++++++.++|.|.++..    +|+||++||..+..+              
T Consensus        79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~----~g~ii~isS~~~~~~--------------  140 (242)
T d1cyda_          79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV----PGSIVNVSSMVAHVT--------------  140 (242)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSC--------------
T ss_pred             EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcc----cCcccccchhhcccc--------------
Confidence            999998654  347888999999999999999999999998765432    689999999987763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .+...+|+++|+|+.+|+|+|+.|++++|  ||||+|+||+++|++....    .....+.+..|..++.+|+|+|+.+
T Consensus       141 -~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v  217 (242)
T d1cyda_         141 -FPNLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSI  217 (242)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             -CCccccccchHHHHHHHHHHHHHHhCccC--eecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             67788999999999999999999999999  9999999999999986533    2334455667888899999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCccC
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +||++ +.++++||+.|. |+|++
T Consensus       218 ~fL~S-~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         218 LFLLS-DRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             HHHHS-GGGTTCCSSEEEESTTGG
T ss_pred             HHHhC-chhcCcCCceEEeCcchh
Confidence            99997 899999999887 77765

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-46  Score=311.59  Aligned_cols=225  Identities=17%  Similarity=0.237  Sum_probs=193.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++      ..+..+.+|++|+++++++++    .+++||+|
T Consensus        11 lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~----~~g~iDil   80 (244)
T d1pr9a_          11 LVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG----SVGPVDLL   80 (244)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----TCCCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHHH----HhCCceEE
Confidence            69999999999999999999999999999999888777654      347888999999999877664    56899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++++++.++|.|.++..    .|+||++||..+..+              
T Consensus        81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~----~g~Ii~isS~~~~~~--------------  142 (244)
T d1pr9a_          81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV----PGAIVNVSSQCSQRA--------------  142 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSC--------------
T ss_pred             EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC----cceEeeccccccccc--------------
Confidence            999998755  347788999999999999999999999997655321    689999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                       .+....|++||+|+.+|+|+++.|++++|  ||||+|+||+++|++.+..    .........+|..++.+|+|+|+.+
T Consensus       143 -~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v  219 (244)
T d1pr9a_         143 -VTNHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAI  219 (244)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             -ccchhhhhhhHHHHHHHHHHHHHHhCCCc--EEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence             67788999999999999999999999999  9999999999999986543    2233344456778889999999999


Q ss_pred             HHHhcCCCccCCCceeec-cCccC
Q 023054          235 CYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      +||+| +.++++||+.|. |+|++
T Consensus       220 ~fL~S-~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         220 LFLLS-DRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             HHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHhC-chhCCcCCcEEEECccHh
Confidence            99997 899999999887 66664

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.5e-46  Score=317.02  Aligned_cols=244  Identities=20%  Similarity=0.153  Sum_probs=201.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++     +.++..+.+|+++.++++++++++.+.++++|++
T Consensus         9 lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           9 LITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            69999999999999999999999999999999888877665     4579999999999999999999999999999999


Q ss_pred             EEccccCCCCC-------CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccC
Q 023054           81 INNAGIMFCPY-------QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        81 v~~ag~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      |||||+.....       +.+.+.|++++++|+.++++++++++|+|+++      +|+||+++|..+..+         
T Consensus        84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~g~iI~i~S~~~~~~---------  148 (276)
T d1bdba_          84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS------RGNVIFTISNAGFYP---------  148 (276)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGTST---------
T ss_pred             cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc------CCCceeeeechhccC---------
Confidence            99999864321       22234599999999999999999999999876      489999999988763         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh------------HHHHHHHHHHh
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA------------VVMRFLKFFSF  221 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~------------~~~~~~~~~~~  221 (288)
                            .+....|++||+|+.+|+|++|.|+++ +  ||||+|+||+|+|+|.....            ........+|.
T Consensus       149 ------~~~~~~Y~asKaal~~ltr~lA~ela~-~--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  219 (276)
T d1bdba_         149 ------NGGGPLYTAAKHAIVGLVRELAFELAP-Y--VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI  219 (276)
T ss_dssp             ------TSSCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHhhc-c--eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC
Confidence                  667789999999999999999999985 5  99999999999999865431            12223334577


Q ss_pred             hhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccCC--CCccccCHHHHHHHH
Q 023054          222 FLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEMP--PSALARDETLAKKLW  273 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~--~~~~~~~~~~~~~~~  273 (288)
                      .++.+|+|+|+.++||+|.++++++||+.|. |+|+..  ....+...++.+.+|
T Consensus       220 gR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~~g~~~~~~~~~~~~~~~  274 (276)
T d1bdba_         220 GRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDLLEQLN  274 (276)
T ss_dssp             SSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGGCCSSCSCSCTTHHHHHT
T ss_pred             CCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhhcceeCCCCCcchHHHhc
Confidence            8888999999999999974578999999887 666542  222333334444443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-45  Score=306.84  Aligned_cols=236  Identities=19%  Similarity=0.197  Sum_probs=202.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+++...++..++.+++||++++++++++++++.+.+++||+|
T Consensus        14 lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~l   93 (257)
T d1xg5a_          14 LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDIC   93 (257)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999999999999998777889999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||...+  ..+.+.++|+..+++|+.+++++++.++|.|.++..   .+|+||++||.++...             .
T Consensus        94 VnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~---~~g~Ii~isS~~~~~~-------------~  157 (257)
T d1xg5a_          94 INNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV---DDGHIININSMSGHRV-------------L  157 (257)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC---CSCEEEEECCGGGTSC-------------C
T ss_pred             EecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc---CCCceEEEechHhcCC-------------C
Confidence            999998754  347888999999999999999999999999987531   1589999999987642             0


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHh--cccCCceEEEEeeCCcccCCCCCCC--hHHHHHHHHHHhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRF--QEEGVNITANSVHPGLIMTNLFKHS--AVVMRFLKFFSFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~--~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~  234 (288)
                      +......|+++|+|+.+|+++|+.|+  ++.+  |+||+|+||+++|++....  ..........+..++.+|+|+|+.+
T Consensus       158 p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~--I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  235 (257)
T d1xg5a_         158 PLSVTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAV  235 (257)
T ss_dssp             SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCC--EEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHH
Confidence            23455679999999999999999999  5566  9999999999999986533  1234455667888889999999999


Q ss_pred             HHHhcCCCccCCCcee-eccCc
Q 023054          235 CYVALHPNLKGVTGKY-FLDCN  255 (288)
Q Consensus       235 ~~l~~~~~~~~~tG~~-~~~~~  255 (288)
                      +||++ +.++++||+. +.++|
T Consensus       236 ~fL~s-~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         236 IYVLS-TPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHH-SCTTEEEEEEEEEETT
T ss_pred             HHHhC-ChhcCeECCEEEEeCC
Confidence            99998 7899999985 44544

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=3.8e-46  Score=308.44  Aligned_cols=226  Identities=19%  Similarity=0.190  Sum_probs=194.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.+++++..+++     +.++.+++||++++++++++++++.+.++++|+|
T Consensus         9 lItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           9 LVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            69999999999999999999999999999998877665544     5678999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++++++|+.+++.++++++|+|.+       .+.|+++||.+...               
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~-------~~~i~~~ss~a~~~---------------  141 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE-------GGSLVLTGSVAGLG---------------  141 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT-------TCEEEEECCCTTCC---------------
T ss_pred             ccccccccccchhhhhcccccccccccccccccccccccccccc-------ccceeecccccccc---------------
Confidence            999998754  347888999999999999999999999999866       35677776665432               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HHHHHHHHHHhhhcCChHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VVMRFLKFFSFFLWKNVPQGAATTCY  236 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~  236 (288)
                       .++...|+++|+|+++|+++|++|++++|  ||||+|+||+++|++....+  ......+..|..++.+|+|+|+.++|
T Consensus       142 -~~~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~f  218 (241)
T d2a4ka1         142 -AFGLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALF  218 (241)
T ss_dssp             -HHHHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred             -ccCccccchhhHHHHHHHHHHHHHHhHhC--CEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence             45678899999999999999999999999  99999999999999987652  23345555678888999999999999


Q ss_pred             HhcCCCccCCCceeec-cCccC
Q 023054          237 VALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       237 l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+| +.++++||+.|. |+|+.
T Consensus       219 L~S-~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         219 LLS-EESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHS-GGGTTCCSCEEEESTTTT
T ss_pred             Hhc-chhCCCcCceEEeCCCcc
Confidence            997 899999999777 67664

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.4e-45  Score=307.26  Aligned_cols=230  Identities=20%  Similarity=0.246  Sum_probs=198.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEe-CChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAA-RNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++ |+++.++++.+++.+.  +.+++++.||++|.++++.+++++.+++++||+
T Consensus        10 lITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   87 (259)
T d1ja9a_          10 LTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVSHFGGLDF   87 (259)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            6999999999999999999999999875 5666678888888765  568999999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ||||||.....  .+.+.++|++.+++|+.+++++++.++|+|++       .+++++++|..+...             
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~~iii~s~~~~~~-------------  147 (259)
T d1ja9a_          88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMT-------------  147 (259)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCC-------------
T ss_pred             EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc-------CCccccccccccccc-------------
Confidence            99999987553  36788999999999999999999999999965       368888888776542             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---------------hHHHHHHHHHHhh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---------------AVVMRFLKFFSFF  222 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---------------~~~~~~~~~~~~~  222 (288)
                       +.+....|+++|+|+.+|+|+|+++++++|  ||||+|+||+++|+|.+..               ..........|..
T Consensus       148 -~~~~~~~Y~asK~al~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~  224 (259)
T d1ja9a_         148 -GIPNHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK  224 (259)
T ss_dssp             -SCCSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHhhcC--eEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC
Confidence             466778999999999999999999999999  9999999999999874321               1223344556778


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++.+|+|+|+.++||++ +.++++||+.|. |+|+
T Consensus       225 R~g~p~eVa~~v~fL~S-~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         225 RIGYPADIGRAVSALCQ-EESEWINGQVIKLTGGG  258 (259)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhC-chhcCCcCceEEeCCCC
Confidence            88999999999999998 889999999887 6654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1e-44  Score=298.75  Aligned_cols=219  Identities=19%  Similarity=0.167  Sum_probs=186.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.+++           ....++.||+++.      ++.+.++++++|+|
T Consensus         8 lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-----------~~~~~~~~Dv~~~------~~~~~~~~g~iD~l   70 (234)
T d1o5ia_           8 LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-----------SGHRYVVCDLRKD------LDLLFEKVKEVDIL   70 (234)
T ss_dssp             EEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----------TCSEEEECCTTTC------HHHHHHHSCCCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-----------cCCcEEEcchHHH------HHHHHHHhCCCcEE
Confidence            699999999999999999999999999999865543           1245678999864      34455667899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||+...  ..+.+.++|++.+++|+.+++++++.++|+|++++     .|+||+++|..+..               
T Consensus        71 VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-----~G~ii~i~S~~~~~---------------  130 (234)
T d1o5ia_          71 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-----WGRIVAITSFSVIS---------------  130 (234)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTS---------------
T ss_pred             EecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-----cccccccccccccc---------------
Confidence            999998654  34778899999999999999999999999999876     68999999998765               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                      +.+....|++||+|+.+|+|++|+|++++|  ||||+|+||+++|++....   .....+.+..|..++.+|+|+|+.++
T Consensus       131 ~~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~  208 (234)
T d1o5ia_         131 PIENLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVA  208 (234)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             cccccccchhHHHHHHHHHHHHHHHhcccC--eEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            367788999999999999999999999999  9999999999999987543   22333445567888899999999999


Q ss_pred             HHhcCCCccCCCceeec-cCccCCC
Q 023054          236 YVALHPNLKGVTGKYFL-DCNEMPP  259 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~~~~  259 (288)
                      ||+| ++++++||+.|. |+|+...
T Consensus       209 fL~S-~~s~~itG~~i~vDGG~s~~  232 (234)
T d1o5ia_         209 FLCS-EKASYLTGQTIVVDGGLSKF  232 (234)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTCCCC
T ss_pred             HHhC-hhhcCCcCcEEEECcccccC
Confidence            9997 899999999887 7777654

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=9.1e-45  Score=303.42  Aligned_cols=229  Identities=13%  Similarity=0.107  Sum_probs=190.0

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|  |||+++|++|+++|++|++++|+++..++..+ +...  ..+..++++|++|+++++++++++.+.+++||
T Consensus        12 lITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD   88 (256)
T d1ulua_          12 LVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK-LAEA--LGGALLFRADVTQDEELDALFAGVKEAFGGLD   88 (256)
T ss_dssp             EEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HHHH--TTCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             EEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH-hhhc--cCcccccccccCCHHHHHHHHHHHHHhcCCce
Confidence            6999987  99999999999999999999999765555443 3333  34577899999999999999999999999999


Q ss_pred             eEEEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc
Q 023054           79 ILINNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ  152 (288)
Q Consensus        79 ~lv~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  152 (288)
                      +||||||+...      ..+.+.++|+..+++|+.+++.+++.++|+|.+       +|+||++||..+..+        
T Consensus        89 ilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~Iv~isS~~~~~~--------  153 (256)
T d1ulua_          89 YLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEKV--------  153 (256)
T ss_dssp             EEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTSB--------
T ss_pred             EEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc-------CCEEEEEeehHhcCC--------
Confidence            99999998542      235666789999999999999999999999865       479999999998763        


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChH
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVP  228 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~  228 (288)
                             .+...+|++||+|+.+|+|++|.|++++|  ||||+|+||+++|++.....    ......+..|..++.+|+
T Consensus       154 -------~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pe  224 (256)
T d1ulua_         154 -------VPKYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE  224 (256)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHH
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHhcccC--CEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHH
Confidence                   67778999999999999999999999999  99999999999999876542    233455566788889999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+|+.++||+| +.++++||+.|. |+|+.
T Consensus       225 dvA~~v~fL~S-~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         225 EVGNLGLFLLS-PLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhC-chhCCccCCeEEECcCEe
Confidence            99999999997 899999999887 66653

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6e-44  Score=304.02  Aligned_cols=241  Identities=17%  Similarity=0.178  Sum_probs=199.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC---------ChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR---------NMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFI   71 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (288)
                      |||||++|||+++|+.|+++|++|++++|         +.+.++++.+++...     .....+|++|.++++++++++.
T Consensus        11 lITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_          11 LVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----GGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----TCEEEEECCCGGGHHHHHHHHH
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc-----ccccccccchHHHHHHHHHHHH
Confidence            69999999999999999999999999865         456677777777554     3456789999999999999999


Q ss_pred             hcCCCcceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc
Q 023054           72 ALNLPLNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI  149 (288)
Q Consensus        72 ~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  149 (288)
                      +.+|+||+||||||+..+  ..+.+.++|++.+++|+.++++++++++|+|++++     .|+||++||..+..+     
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-----~G~IV~isS~~~~~~-----  155 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-----YGRIIMTASASGIYG-----  155 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC-----
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-----CcEEEEeCChhhcCC-----
Confidence            999999999999998765  34788899999999999999999999999999876     799999999998874     


Q ss_pred             cccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHH
Q 023054          150 RFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQ  229 (288)
Q Consensus       150 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (288)
                                .++..+|++||+|+.+|+++|+.|++++|  ||||+|+||++.|++....+.        +.....+|+|
T Consensus       156 ----------~~~~~~Y~asKaal~~lt~~la~E~~~~g--IrVN~I~PG~~~t~~~~~~~~--------~~~~~~~Ped  215 (302)
T d1gz6a_         156 ----------NFGQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAGSRMTETVMPE--------DLVEALKPEY  215 (302)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECCSTTTGGGSCH--------HHHHHSCGGG
T ss_pred             ----------CCCcHHHHHHHHHHHHHHHHHHHHHhccC--CceeeeCCCCCCcchhhcCcH--------hhHhcCCHHH
Confidence                      67789999999999999999999999999  999999999998887654421        1223468999


Q ss_pred             HHHHHHHHhcCCCccCCCceeec-cCccCCC-------------CccccCHHHHHHHHHHHHH
Q 023054          230 GAATTCYVALHPNLKGVTGKYFL-DCNEMPP-------------SALARDETLAKKLWDFSNK  278 (288)
Q Consensus       230 ~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~~-------------~~~~~~~~~~~~~~~~~~~  278 (288)
                      +|+.++||++ +.+ ++||+.|. |+|+...             .....+.+...+.|+...+
T Consensus       216 vA~~v~fL~S-~~a-~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d  276 (302)
T d1gz6a_         216 VAPLVLWLCH-ESC-EENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICD  276 (302)
T ss_dssp             THHHHHHHTS-TTC-CCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTC
T ss_pred             HHHHHHHHcC-CCc-CCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhC
Confidence            9999999997 554 78999886 6654311             1223355666666765543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=7.1e-44  Score=300.42  Aligned_cols=229  Identities=22%  Similarity=0.285  Sum_probs=197.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC-hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN-MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|+.|+++|++|++++|+ ++.++++.+++.+.  +.++.++.+|++|+++++++++++.+.++++|+
T Consensus        22 lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   99 (272)
T d1g0oa_          22 LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI   99 (272)
T ss_dssp             EETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            699999999999999999999999999886 56677788877766  567999999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      +|||+|.....  .+.+.++|++.+++|+.+++.+++.+.|+|.+       .+++++++|..+...             
T Consensus       100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-------~g~~i~i~s~~~~~~-------------  159 (272)
T d1g0oa_         100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGSITGQAK-------------  159 (272)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-------TCEEEEECCGGGTCS-------------
T ss_pred             cccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc-------ccccccccccccccc-------------
Confidence            99999987553  36778899999999999999999999999976       479999999876542             


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-----------hH----HHHHHHHHHhh
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-----------AV----VMRFLKFFSFF  222 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-----------~~----~~~~~~~~~~~  222 (288)
                       ..+....|+++|+|+++|+|++++||+++|  ||||+|+||+++|++....           ..    .....+..|..
T Consensus       160 -~~~~~~~Y~asKaal~~ltk~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg  236 (272)
T d1g0oa_         160 -AVPKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR  236 (272)
T ss_dssp             -SCSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC
T ss_pred             -cccchhhHHHHHHHHHHHHHHHHHHhchhC--eEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCC
Confidence             355667899999999999999999999999  9999999999999875322           00    11233345778


Q ss_pred             hcCChHHHHHHHHHHhcCCCccCCCceeec-cCc
Q 023054          223 LWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCN  255 (288)
Q Consensus       223 ~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~  255 (288)
                      ++.+|+|+|+.++||++ +.++++||+.|. |+|
T Consensus       237 R~~~peevA~~v~fL~s-~~s~~itG~~i~vDGG  269 (272)
T d1g0oa_         237 RVGLPIDIARVVCFLAS-NDGGWVTGKVIGIDGG  269 (272)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhC-chhcCccCceEeECCC
Confidence            88999999999999997 899999999887 554

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.7e-43  Score=294.90  Aligned_cols=229  Identities=19%  Similarity=0.159  Sum_probs=196.3

Q ss_pred             CcccCCChhHHHHHHHHHH---CCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc----
Q 023054            1 MLAGGASGIGLETARVLAL---RKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL----   73 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~----   73 (288)
                      |||||++|||+++|++|++   +|++|++++|+++.++++.+++...+++.++.+++||++++++++++++.+.+.    
T Consensus        10 lITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~   89 (259)
T d1oaaa_          10 VLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPE   89 (259)
T ss_dssp             EESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCT
T ss_pred             EEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhc
Confidence            6999999999999999996   799999999999999999999998888889999999999999999999998773    


Q ss_pred             CCCcceEEEccccCCC-----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCC
Q 023054           74 NLPLNILINNAGIMFC-----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGG  148 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  148 (288)
                      ++.+|++|||||+..+     ..+.+.++|++++++|+.+++++++.++|+|.+++   ...|+||++||.++..+    
T Consensus        90 ~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~---~~~g~Iv~isS~~~~~~----  162 (259)
T d1oaaa_          90 GLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLCALQP----  162 (259)
T ss_dssp             TCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGGGTSC----
T ss_pred             cCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcC---CCcccccccccccccCC----
Confidence            4579999999998643     23567788999999999999999999999997643   11479999999998763    


Q ss_pred             ccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-------hHHHHHHHHHHh
Q 023054          149 IRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-------AVVMRFLKFFSF  221 (288)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-------~~~~~~~~~~~~  221 (288)
                                 .++...|++||+|+.+|+++|+.|  .+|  ||||+|+||+|+|+|....       .....+....+.
T Consensus       163 -----------~~~~~~Y~asKaal~~lt~~la~e--~~g--IrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  227 (259)
T d1oaaa_         163 -----------YKGWGLYCAGKAARDMLYQVLAAE--EPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD  227 (259)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHH--CTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT
T ss_pred             -----------CccchHHHHHHHHHHHHHHHHHhC--CCC--CEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC
Confidence                       677899999999999999999998  456  9999999999999986432       122334445577


Q ss_pred             hhcCChHHHHHHHHHHhcCCCccCCCceeecc
Q 023054          222 FLWKNVPQGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                      .++.+|+++|+.++||++ + .+++||+.|+.
T Consensus       228 ~r~~~p~evA~~i~~ll~-~-~s~~TG~~idv  257 (259)
T d1oaaa_         228 GALVDCGTSAQKLLGLLQ-K-DTFQSGAHVDF  257 (259)
T ss_dssp             TCSBCHHHHHHHHHHHHH-H-CCSCTTEEEET
T ss_pred             CCCCCHHHHHHHHHHHhh-h-ccCCCCCeEEe
Confidence            778899999999999996 3 57999998863

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-43  Score=299.98  Aligned_cols=236  Identities=27%  Similarity=0.345  Sum_probs=194.4

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++ |++|++++|+.++++++.+++...  +.++.++.||++|.++++++++++.+.+++||+
T Consensus         7 lVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDi   84 (275)
T d1wmaa1           7 LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDV   84 (275)
T ss_dssp             EESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEE
Confidence            69999999999999999986 899999999999999999999887  457889999999999999999999999999999


Q ss_pred             EEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc------
Q 023054           80 LINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF------  151 (288)
Q Consensus        80 lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~------  151 (288)
                      ||||||+....  .+.+.++|+..|++|+.+++++++.++|+|++       .|+||++||..+..+.+....+      
T Consensus        85 LVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------~g~ivnisS~~~~~~~~~~~~y~~~k~~  157 (275)
T d1wmaa1          85 LVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQKFR  157 (275)
T ss_dssp             EEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             EEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCcccccccceeccccccchhhhhhhc
Confidence            99999987653  34456789999999999999999999999965       4799999998876543221100      


Q ss_pred             --------------------cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccc--CCceEEEEeeCCcccCCCCCCC
Q 023054          152 --------------------QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEE--GVNITANSVHPGLIMTNLFKHS  209 (288)
Q Consensus       152 --------------------~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~--~~~i~v~~v~PG~v~t~~~~~~  209 (288)
                                          ..........+..+|++||+++.+|++.++++++++  +.+|+||+|+||++.|+|....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~  237 (275)
T d1wmaa1         158 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK  237 (275)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT
T ss_pred             ccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc
Confidence                                000011123345679999999999999999999874  1239999999999999998754


Q ss_pred             hHHHHHHHHHHhhhcCChHHHHHHHHHHhc-CCCccCCCceeeccCccCC
Q 023054          210 AVVMRFLKFFSFFLWKNVPQGAATTCYVAL-HPNLKGVTGKYFLDCNEMP  258 (288)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~tG~~~~~~~~~~  258 (288)
                                   ...+|+++|+.++|++. .++..+++|+||.+++..+
T Consensus       238 -------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~~~v~~  274 (275)
T d1wmaa1         238 -------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQ  274 (275)
T ss_dssp             -------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEEC
T ss_pred             -------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEECCEEec
Confidence                         23589999999999984 3566788999998876554

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=2.6e-43  Score=300.41  Aligned_cols=255  Identities=16%  Similarity=0.196  Sum_probs=208.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.++++++.+++...+ +.++.++.||+++.++++++++.+.+.++++|+|
T Consensus        29 lITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDil  107 (294)
T d1w6ua_          29 FITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIV  107 (294)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhhhhhccccchh
Confidence            699999999999999999999999999999999999998887765 5678999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||.....  ...+.++++..+.+|+.+.+.+.+...+.+.....    .+.+++++|..+...              
T Consensus       108 vnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~i~~~ss~~~~~~--------------  169 (294)
T d1w6ua_         108 INNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK----GAAFLSITTIYAETG--------------  169 (294)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----CEEEEEECCTHHHHC--------------
T ss_pred             hhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccc----cccccccccchhhhc--------------
Confidence            9999987553  35667889999999999999999998887766432    567888888887763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-----hHHHHHHHHHHhhhcCChHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-----AVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                       .+...+|+++|+|+.+|+|.+|++++++|  ||||+|+||+++|++....     .......+.+|..++.+|+|+|+.
T Consensus       170 -~~~~~~YsasKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~  246 (294)
T d1w6ua_         170 -SGFVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANL  246 (294)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             -ccccchHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHH
Confidence             66778899999999999999999999999  9999999999999986543     233445555678889999999999


Q ss_pred             HHHHhcCCCccCCCceeec-cCccC--CCCccccCHHHHHHHHHHHHH
Q 023054          234 TCYVALHPNLKGVTGKYFL-DCNEM--PPSALARDETLAKKLWDFSNK  278 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~  278 (288)
                      ++||++ +++.++||+.|. |+|..  ....+..-....+..|+-.++
T Consensus       247 v~fL~s-d~s~~itG~~i~vDGG~~l~~~~~~~~~~~~~~~~~~~~~~  293 (294)
T d1w6ua_         247 AAFLCS-DYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEE  293 (294)
T ss_dssp             HHHHTS-GGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTT
T ss_pred             HHHHhC-chhcCCCCcEEEECCChhheeCCCCCchhhcchhhhhhHhh
Confidence            999997 889999999887 66632  222222223444566665554

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-43  Score=293.05  Aligned_cols=224  Identities=25%  Similarity=0.301  Sum_probs=188.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|++++++++.+       ...+.+..+|+.+.+.++.+    .+.++++|+|
T Consensus        10 lITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-------~~~~~~~~~d~~~~~~~~~~----~~~~~~id~l   78 (245)
T d2ag5a1          10 ILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-------YPGIQTRVLDVTKKKQIDQF----ANEVERLDVL   78 (245)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-------STTEEEEECCTTCHHHHHHH----HHHCSCCSEE
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-------ccCCceeeeecccccccccc----ccccccceeE
Confidence            699999999999999999999999999999887665432       23477888899886665554    4456899999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.++|++.+++|+.+++.+++.+.|+|.+++     .|+||++||..+...              
T Consensus        79 Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-----~g~Ii~isS~~~~~~--------------  139 (245)
T d2ag5a1          79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-----SGNIINMSSVASSVK--------------  139 (245)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCSBTTTB--------------
T ss_pred             EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-----CceeeeeechhhccC--------------
Confidence            999998765  34778899999999999999999999999998876     789999999876532              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hHHHHHHHHHHhhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AVVMRFLKFFSFFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  230 (288)
                      +++...+|+++|+|+++|+|+||.|++++|  ||||+|+||+++|++....        .....+....|..++.+|+|+
T Consensus       140 ~~~~~~~Y~~sKaal~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedv  217 (245)
T d2ag5a1         140 GVVNRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEI  217 (245)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHH
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHH
Confidence            366778999999999999999999999999  9999999999999986533        112334445677788899999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      |+.+.||++ +++.++||+.|. |+|+.
T Consensus       218 a~~v~fL~s-~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         218 AMLCVYLAS-DESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HHHHHHHHS-GGGTTCCSCEEEECTTGG
T ss_pred             HHHHHHHhC-hhhCCCcCceEEeCCCcC
Confidence            999999997 899999999887 66653

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-43  Score=288.11  Aligned_cols=209  Identities=23%  Similarity=0.273  Sum_probs=186.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++.++.||++|.++++++++++.+.++++|+|
T Consensus        11 lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idil   88 (244)
T d1yb1a_          11 LITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSIL   88 (244)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCcee
Confidence            69999999999999999999999999999999999999999865  5689999999999999999999999999999999


Q ss_pred             EEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      |||||....  ..+.+.+.|++++++|+.+++++++.++|.|.+++     .|+||++||..+..+              
T Consensus        89 innag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-----~G~Iv~isS~~~~~~--------------  149 (244)
T d1yb1a_          89 VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-----HGHIVTVASAAGHVS--------------  149 (244)
T ss_dssp             EECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCCC-CCC--------------
T ss_pred             EeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-----CceEEEeecchhcCC--------------
Confidence            999998765  33667788999999999999999999999999876     799999999998863              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccC-CceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEG-VNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYV  237 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~-~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  237 (288)
                       .+...+|++||+|+.+|+++|+.|+++.+ .+|+||+|+||+|+|+|.+...        .+.....+|+++|+.++..
T Consensus       150 -~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~--------~~~~~~~~pe~va~~i~~~  220 (244)
T d1yb1a_         150 -VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS--------TSLGPTLEPEEVVNRLMHG  220 (244)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH--------HHHCCCCCHHHHHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC--------ccccCCCCHHHHHHHHHHH
Confidence             67788999999999999999999998742 2399999999999999987642        2334556899999999998


Q ss_pred             hc
Q 023054          238 AL  239 (288)
Q Consensus       238 ~~  239 (288)
                      +.
T Consensus       221 ~~  222 (244)
T d1yb1a_         221 IL  222 (244)
T ss_dssp             HH
T ss_pred             Hh
Confidence            86

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.4e-42  Score=287.56  Aligned_cols=226  Identities=22%  Similarity=0.282  Sum_probs=188.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCC-ChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLS-SIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|+.+..+.. .++....++.++.++.+|++ +.++++++++++.+++++||+
T Consensus         9 lITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDi   87 (254)
T d1sbya1           9 IFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDI   87 (254)
T ss_dssp             EEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6999999999999999999999999998887665544 44555555778999999998 677899999999999999999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAG  159 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~  159 (288)
                      ||||||..      +.+.|++++++|+.++++++++++|.|.+++.  +..|+||++||.++..+               
T Consensus        88 lvnnAG~~------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--~~~g~Ii~isS~~~~~~---------------  144 (254)
T d1sbya1          88 LINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG--GPGGIIANICSVTGFNA---------------  144 (254)
T ss_dssp             EEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTSC---------------
T ss_pred             EEeCCCCC------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhccc--CCCceEEEEechhhccC---------------
Confidence            99999964      56889999999999999999999999977532  22689999999998763               


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                      .+...+|++||+|+.+|+++|+.++++.|  ||||+|+||+++|+|.+...    ....+.+........+||++|+.++
T Consensus       145 ~~~~~~Y~asKaal~~~t~~la~el~~~g--IrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~  222 (254)
T d1sbya1         145 IHQVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFV  222 (254)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhhccccC--eEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHH
Confidence            77888999999999999999999999999  99999999999999755431    1122333344455668999999998


Q ss_pred             HHhcCCCccCCCceeec-cCcc
Q 023054          236 YVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ++++    ...||+.+. |+|.
T Consensus       223 ~~~~----~~~tG~vi~vdgG~  240 (254)
T d1sbya1         223 KAIE----ANKNGAIWKLDLGT  240 (254)
T ss_dssp             HHHH----HCCTTCEEEEETTE
T ss_pred             Hhhh----CCCCCCEEEECCCE
Confidence            8885    235999775 6664

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-41  Score=286.67  Aligned_cols=226  Identities=20%  Similarity=0.223  Sum_probs=178.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEE---EEeCChHHHHHHHHHHHh-hCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVI---IAARNMAAANEARQLILK-EDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~---~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||++|||+++|+.|+++|++|+   ++.|+.+..+++.+.... ...+.++.++.||++|.++++++++++.+  +.
T Consensus         6 lITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~--g~   83 (285)
T d1jtva_           6 LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE--GR   83 (285)
T ss_dssp             EESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT--SC
T ss_pred             EEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc--cc
Confidence            6899999999999999999999754   445665444443333322 22367899999999999999999987643  78


Q ss_pred             cceEEEccccCCC--CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           77 LNILINNAGIMFC--PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        77 id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      +|+||||||....  ..+.+.++|++.+++|+.|+++++++++|+|.+++     .|+||++||.++..+          
T Consensus        84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-----~G~Iv~isS~~g~~~----------  148 (285)
T d1jtva_          84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-----SGRVLVTGSVGGLMG----------  148 (285)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEEEEGGGTSC----------
T ss_pred             hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-----CCceEEEechhhcCC----------
Confidence            9999999998755  34678899999999999999999999999999876     699999999998874          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh-------------HHHHH------
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA-------------VVMRF------  215 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~-------------~~~~~------  215 (288)
                           .+....|++||+|+.+|+++|+.|++++|  |+||+|+||+++|+|.....             ...++      
T Consensus       149 -----~~~~~~Y~asKaal~~l~~~la~El~~~g--IrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (285)
T d1jtva_         149 -----LPFNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAH  221 (285)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHH
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHH
Confidence                 67788999999999999999999999999  99999999999999986531             01111      


Q ss_pred             HHHHHhhhcCChHHHHHHHHHHhcCCC--ccCCCcee
Q 023054          216 LKFFSFFLWKNVPQGAATTCYVALHPN--LKGVTGKY  250 (288)
Q Consensus       216 ~~~~~~~~~~~~~~~a~~~~~l~~~~~--~~~~tG~~  250 (288)
                      .+..+..+..+|||+|+.+++++..+.  .+|++|+.
T Consensus       222 ~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         222 SKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             HHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCST
T ss_pred             HhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecHHH
Confidence            123455567899999999999997543  34556553

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.2e-40  Score=276.83  Aligned_cols=226  Identities=23%  Similarity=0.278  Sum_probs=182.0

Q ss_pred             CcccCCChhHHHHHHHHH---HCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh--cCC
Q 023054            1 MLAGGASGIGLETARVLA---LRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA--LNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La---~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--~~~   75 (288)
                      |||||++|||+++|+.|+   ++|++|++++|++++++++.+ +.+.  +.++.++.||++|+++++++++.+.+  .++
T Consensus         6 lITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           6 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN--HSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             EESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH--CTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             EEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhc--CCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            699999999999999996   579999999999998877654 3334  46799999999999999999999854  578


Q ss_pred             CcceEEEccccCCCC---CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC------CCCCeEEEEcCcccccccc
Q 023054           76 PLNILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET------GIEGRIVNLSSIAHQYTYK  146 (288)
Q Consensus        76 ~id~lv~~ag~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~------~~~g~iv~vsS~~~~~~~~  146 (288)
                      ++|+||||||+....   .+.+.++|++++++|+.+++.+++.++|+|.++....      ...|+||+++|..+....+
T Consensus        83 ~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~  162 (248)
T d1snya_          83 GLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN  162 (248)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC
T ss_pred             CcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCC
Confidence            999999999986542   3567788999999999999999999999998764221      1268999999998765311


Q ss_pred             CCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCC
Q 023054          147 GGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKN  226 (288)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  226 (288)
                                  ..++..+|++||+|+.+|+++++.+++++|  |+||+|+||+++|+|......             .+
T Consensus       163 ------------~~~~~~~Y~aSKaal~~lt~~la~e~~~~g--I~vn~v~PG~v~T~m~~~~~~-------------~~  215 (248)
T d1snya_         163 ------------TDGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSSAP-------------LD  215 (248)
T ss_dssp             ------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCTTCS-------------BC
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEcCCCcccCCcccccCC-------------CC
Confidence                        244567899999999999999999999999  999999999999999875421             24


Q ss_pred             hHHHHHHHHHHhcCCCccCCCceeecc-CccC
Q 023054          227 VPQGAATTCYVALHPNLKGVTGKYFLD-CNEM  257 (288)
Q Consensus       227 ~~~~a~~~~~l~~~~~~~~~tG~~~~~-~~~~  257 (288)
                      +++.++.++.++. ......+|+||.. ++..
T Consensus       216 ~~~~~~~i~~~i~-~l~~~~tG~~i~~dG~~i  246 (248)
T d1snya_         216 VPTSTGQIVQTIS-KLGEKQNGGFVNYDGTPL  246 (248)
T ss_dssp             HHHHHHHHHHHHH-HCCGGGTTCEECTTSCBC
T ss_pred             chHHHHHHHHHHH-hcCccCCCcEEEECCeEc
Confidence            5555666666664 3445568999974 4443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=7.7e-40  Score=277.48  Aligned_cols=238  Identities=17%  Similarity=0.126  Sum_probs=186.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhhCCCCceEE-----------------EEecCCChHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR-NMAAANEARQLILKEDDTARVDT-----------------LKLDLSSIAS   62 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~Dl~~~~~   62 (288)
                      |||||++|||+++|+.|+++|++|+++++ +++.++++.+++...++ .....                 +.+|+++.++
T Consensus         6 lITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~   84 (284)
T d1e7wa_           6 LVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGADGSAPVTLFTR   84 (284)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCCCC----CCCBCHHHH
T ss_pred             EEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcC-CceEEEEeecccccccccccccccccCCCHHH
Confidence            69999999999999999999999999876 56667778888876653 33333                 4566999999


Q ss_pred             HHHHHHHHHhcCCCcceEEEccccCCCC--CCCCCCcch--------------hhhhhhhhHHHHHHHhhHHHHHHhhc-
Q 023054           63 IKDFAQNFIALNLPLNILINNAGIMFCP--YQISEDGIE--------------MQFATNHIGHFLLTNLLLDTMNRTAK-  125 (288)
Q Consensus        63 ~~~~~~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~~~~~~~-  125 (288)
                      ++++++++.+.+|+||+||||||+..+.  .+.+.++|+              ..+.+|+.+++++.+.+.+.+..... 
T Consensus        85 v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  164 (284)
T d1e7wa_          85 CAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK  164 (284)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGG
T ss_pred             HHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHH
Confidence            9999999999999999999999987542  244444444              47899999999999999998765332 


Q ss_pred             cCCCCCeEEEEcCccccccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          126 ETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       126 ~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                      .....++|++++|.....               +.++..+|++||+|+.+|+++++++|+++|  ||||+|+||++.+..
T Consensus       165 ~~~~~~~ii~~~s~~~~~---------------~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~t~~~~  227 (284)
T d1e7wa_         165 HRGTNYSIINMVDAMTNQ---------------PLLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGLSVLVD  227 (284)
T ss_dssp             GSCSCEEEEEECCTTTTS---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCCGG
T ss_pred             hcCCCCcccccccccccC---------------CccceeeeccccccchhhhHHHHHHhCCcc--ccccccccccccccc
Confidence            122367899999988765               366778999999999999999999999999  999999999866543


Q ss_pred             CCCChHHHHHHHHHHh-hhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          206 FKHSAVVMRFLKFFSF-FLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       206 ~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ..............|. .++.+|+|+|+.++||++ ++++|+||+.|. |+|+.
T Consensus       228 ~~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S-~~s~~itG~~i~VDGG~s  280 (284)
T d1e7wa_         228 DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGGYS  280 (284)
T ss_dssp             GSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-chhcCccCCeEEECcChh
Confidence            3332333334444453 677899999999999997 899999999777 67664

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-40  Score=272.46  Aligned_cols=227  Identities=19%  Similarity=0.195  Sum_probs=188.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.+.....+|+.+.+.++.....+......+|.+
T Consensus         9 lITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (248)
T d2o23a1           9 VITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   83 (248)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCccccccccccccccccccccccccccccccc
Confidence            69999999999999999999999999999999998888877     4568899999999999999999998888899999


Q ss_pred             EEccccCCC--------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhcc-CCCCCeEEEEcCccccccccCCccc
Q 023054           81 INNAGIMFC--------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKE-TGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        81 v~~ag~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      ++|+++...        ..+.+.+.|++.+++|+.++++++++++|+|..+... ....|+||++||..+..+       
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~-------  156 (248)
T d2o23a1          84 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG-------  156 (248)
T ss_dssp             EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-------
T ss_pred             ccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC-------
Confidence            999876432        1245668899999999999999999999999765322 123689999999998874       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH--HHHHHHHHHh-hhcCChH
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV--VMRFLKFFSF-FLWKNVP  228 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~-~~~~~~~  228 (288)
                              .++..+|++||+|+++|+|+|++|++++|  ||||+|+||+++|+|....+.  ...+....|. .++.+|+
T Consensus       157 --------~~~~~~Y~asKaal~~lt~~la~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~pe  226 (248)
T d2o23a1         157 --------QVGQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPA  226 (248)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHH
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHhcccC--cceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHH
Confidence                    67789999999999999999999999999  999999999999999876522  1123333343 5678999


Q ss_pred             HHHHHHHHHhcCCCccCCCceeec
Q 023054          229 QGAATTCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       229 ~~a~~~~~l~~~~~~~~~tG~~~~  252 (288)
                      |+|+.++||++   .+|+||+.|.
T Consensus       227 evA~~v~fL~s---~~~itGq~I~  247 (248)
T d2o23a1         227 EYAHLVQAIIE---NPFLNGEVIR  247 (248)
T ss_dssp             HHHHHHHHHHH---CTTCCSCEEE
T ss_pred             HHHHHHHHHHh---CCCCCceEeE
Confidence            99999999996   3799999874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.1e-39  Score=271.34  Aligned_cols=226  Identities=24%  Similarity=0.288  Sum_probs=175.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC--C
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL--P   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~   76 (288)
                      |||||++|||+++|++|+++|+  +|++++|+.++++++.    +. .+.+++++.||++|.++++++++.+.+.++  +
T Consensus         7 lITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           7 VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             EESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----Hh-hCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999996  6999999998876543    22 256799999999999999999999988755  4


Q ss_pred             cceEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccC------CCCCeEEEEcCccccccccC
Q 023054           77 LNILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKET------GIEGRIVNLSSIAHQYTYKG  147 (288)
Q Consensus        77 id~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~------~~~g~iv~vsS~~~~~~~~~  147 (288)
                      +|+||||||+..+   ..+.+.++|++.+++|+.|++++++.++|+|+++....      ...+++++++|.......+.
T Consensus        82 idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~  161 (250)
T d1yo6a1          82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT  161 (250)
T ss_dssp             CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred             eEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCc
Confidence            9999999998654   23567788999999999999999999999998764321      12578999998776553211


Q ss_pred             CccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCCh
Q 023054          148 GIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  227 (288)
                              ......+..+|++||+|+.+|+++|+.++++.|  |+||+|+||+|+|+|.....             ..+|
T Consensus       162 --------~~~~~~~~~aY~aSKaal~~l~~~la~el~~~g--I~v~~i~PG~v~T~m~~~~~-------------~~~~  218 (250)
T d1yo6a1         162 --------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKNA-------------ALTV  218 (250)
T ss_dssp             --------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC--------------------------
T ss_pred             --------ccccchhHHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCCCCCCCCC-------------CCCH
Confidence                    112344566799999999999999999999999  99999999999999975431             2478


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeeccCc
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFLDCN  255 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~~~~  255 (288)
                      |+.+..++..+. ......+|+||..++
T Consensus       219 e~~a~~~~~~~~-~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         219 EQSTAELISSFN-KLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHHHHT-TCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHHHh-cCCCCCCeEEECCCC
Confidence            999999999996 445557999997554

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.8e-38  Score=266.49  Aligned_cols=239  Identities=17%  Similarity=0.124  Sum_probs=187.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH-HHHHHHHHHHhhCCCCceEEEEecCCC----hHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA-AANEARQLILKEDDTARVDTLKLDLSS----IASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~~~~~~~~~   75 (288)
                      |||||++|||+++|++|+++|++|++++|+.+ ..+++.+++...+ +.+...+.+|+.+    .+.++++++.+.+.+|
T Consensus         5 lVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   83 (266)
T d1mxha_           5 VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFG   83 (266)
T ss_dssp             EETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHS
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHHHhC
Confidence            69999999999999999999999999999855 4567778887765 4556666666554    5667788888888899


Q ss_pred             CcceEEEccccCCCCC--C-----------CCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc
Q 023054           76 PLNILINNAGIMFCPY--Q-----------ISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ  142 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~--~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  142 (288)
                      +||+||||||+..+..  .           .....+...+..|+.+.+.+.+...+.+..........+.+++++|..+.
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (266)
T d1mxha_          84 RCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTD  163 (266)
T ss_dssp             CCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGG
T ss_pred             CCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcccc
Confidence            9999999999875421  1           11123455778888888888888888776554333346788888888876


Q ss_pred             ccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhh
Q 023054          143 YTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFF  222 (288)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~  222 (288)
                      .               ..++...|++||+|+++|++.++++++++|  ||||+|+||+++|++.........+...+|..
T Consensus       164 ~---------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl~  226 (266)
T d1mxha_         164 L---------------PLPGFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLPPAMPQETQEEYRRKVPLG  226 (266)
T ss_dssp             S---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCCSSSCHHHHHHHHTTCTTT
T ss_pred             c---------------cCcchhhhhhhHHHHhhhHHHHHHHhCccC--cEEEEeccCcEeccccCCHHHHHHHHhcCCCC
Confidence            5               367889999999999999999999999999  99999999999999877655555555555654


Q ss_pred             h-cCChHHHHHHHHHHhcCCCccCCCceeec-cCccCC
Q 023054          223 L-WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEMP  258 (288)
Q Consensus       223 ~-~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~~  258 (288)
                      + +.+|||+|+.++||++ +++.++||+.|. |+|+..
T Consensus       227 r~~~~peeva~~v~fL~s-~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         227 QSEASAAQIADAIAFLVS-KDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             SCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHhC-chhCCccCCeEEECccHhh
Confidence            4 4799999999999998 889999999777 777653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-38  Score=266.15  Aligned_cols=229  Identities=12%  Similarity=0.139  Sum_probs=192.1

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||++  |||+++|+.|+++|++|++++|+++..+.. +++...  ..+...+.+|+++..++...++.+.+.++++|
T Consensus         9 lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   85 (258)
T d1qsga_           9 LVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ--LGSDIVLQCDVAEDASIDTMFAELGKVWPKFD   85 (258)
T ss_dssp             EECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred             EEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh--cCCcceeecccchHHHHHHHHHHhhhcccccc
Confidence            6999998  899999999999999999999997655444 444443  34577889999999999999999999999999


Q ss_pred             eEEEccccCCCCC-------CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc
Q 023054           79 ILINNAGIMFCPY-------QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF  151 (288)
Q Consensus        79 ~lv~~ag~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~  151 (288)
                      ++|||++......       ....+.+...+.+|+.+.+.+++.+.|++.+       ++.|+++||..+..+       
T Consensus        86 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~Ii~iss~~~~~~-------  151 (258)
T d1qsga_          86 GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERA-------  151 (258)
T ss_dssp             EEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB-------
T ss_pred             eEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CcEEEEecchhhccC-------
Confidence            9999998864321       2344567889999999999999999998855       468999999887653       


Q ss_pred             cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh----HHHHHHHHHHhhhcCCh
Q 023054          152 QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA----VVMRFLKFFSFFLWKNV  227 (288)
Q Consensus       152 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~  227 (288)
                              .+....|++||+|+++|+++++.+|+++|  ||||+|+||+++|++.....    .........|..++.+|
T Consensus       152 --------~~~~~~Y~~sKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~p  221 (258)
T d1qsga_         152 --------IPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI  221 (258)
T ss_dssp             --------CTTTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCH
T ss_pred             --------CCCcHHHHHHHHHHHHHHHHHHHHhCccC--ceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCH
Confidence                    56678899999999999999999999999  99999999999999987652    22234445677888999


Q ss_pred             HHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          228 PQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       228 ~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ||+|+.++||++ ++++++||+.|. |+|+.
T Consensus       222 eeia~~v~fL~s-~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         222 EDVGNSAAFLCS-DLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             HHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHhC-chhcCccCceEEECcCHH
Confidence            999999999997 889999999777 77764

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-38  Score=263.02  Aligned_cols=211  Identities=21%  Similarity=0.198  Sum_probs=184.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++.++++.+++.... +..+..+.+|+++.+.+..+.+.+.+.++.+|++
T Consensus        18 lITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~l   96 (269)
T d1xu9a_          18 IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDML   96 (269)
T ss_dssp             EESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHhCCcccc
Confidence            699999999999999999999999999999999999998877664 5678999999999999999999999999999999


Q ss_pred             EEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           81 INNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        81 v~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +||||.....  .+.+.++|++++++|+.+++.+++.++|+|++.      +|+||++||.++..+              
T Consensus        97 i~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~------~G~ii~isS~~~~~~--------------  156 (269)
T d1xu9a_          97 ILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKVA--------------  156 (269)
T ss_dssp             EECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTSC--------------
T ss_pred             ccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc------CCcceEeccchhcCC--------------
Confidence            9999987542  356778999999999999999999999999765      589999999998763              


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVA  238 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  238 (288)
                       .+...+|++||+|+.+|+++|+.|++.++.+|+||+|+||+++|+|....      ....+.....+|+++|+.++...
T Consensus       157 -~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~------~~~~~~~~~~~~e~~a~~i~~~~  229 (269)
T d1xu9a_         157 -YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA------VSGIVHMQAAPKEECALEIIKGG  229 (269)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH------SCGGGGGGCBCHHHHHHHHHHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHh------ccCCccccCCCHHHHHHHHHHHh
Confidence             77889999999999999999999998776669999999999999875421      11123334568999999999877


Q ss_pred             c
Q 023054          239 L  239 (288)
Q Consensus       239 ~  239 (288)
                      .
T Consensus       230 ~  230 (269)
T d1xu9a_         230 A  230 (269)
T ss_dssp             H
T ss_pred             h
Confidence            5

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.7e-39  Score=278.39  Aligned_cols=231  Identities=15%  Similarity=0.131  Sum_probs=184.0

Q ss_pred             Cccc--CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCC----------CCceEEE---------------
Q 023054            1 MLAG--GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDD----------TARVDTL---------------   53 (288)
Q Consensus         1 lItG--as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~---------------   53 (288)
                      ||||  +++|||+++|+.|+++|++|++++++................          .......               
T Consensus         6 lITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (329)
T d1uh5a_           6 FIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEE   85 (329)
T ss_dssp             EEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHH
T ss_pred             EEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchh
Confidence            6999  668999999999999999999999987765544443322211          0111222               


Q ss_pred             -----EecCCChHHHHHHHHHHHhcCCCcceEEEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhh
Q 023054           54 -----KLDLSSIASIKDFAQNFIALNLPLNILINNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTA  124 (288)
Q Consensus        54 -----~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  124 (288)
                           .+|+++.++++++++.+.+.+|+||+||||||....    ..+.+.++|++.+++|+++.+.++|+++|+|.+  
T Consensus        86 ~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~--  163 (329)
T d1uh5a_          86 TKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP--  163 (329)
T ss_dssp             HHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--
T ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc--
Confidence                 247778889999999999999999999999997643    236778899999999999999999999999954  


Q ss_pred             ccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCc-cccchhhHHHHHHHHHHHHHHhcc-cCCceEEEEeeCCccc
Q 023054          125 KETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSD-KKAYGQSKLANILHANELSRRFQE-EGVNITANSVHPGLIM  202 (288)
Q Consensus       125 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~-~~~~i~v~~v~PG~v~  202 (288)
                           .|+||++||..+...               .+. ...|+++|+|+++|+|.++.||++ +|  ||||+|+||+|+
T Consensus       164 -----~GsIv~iss~~~~~~---------------~p~y~~~y~asKaal~~ltr~lA~Ela~~~g--IRVNaI~PG~i~  221 (329)
T d1uh5a_         164 -----QSSIISLTYHASQKV---------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYN--IRINTISAGPLK  221 (329)
T ss_dssp             -----EEEEEEEECGGGTSC---------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCCC
T ss_pred             -----ccccccceeehhccc---------------ccccchhhhhhhccccccchhhHHHHhcccC--cEEEEEecCccc
Confidence                 479999999887753               333 457999999999999999999987 58  999999999999


Q ss_pred             CCCCCCC-----------------------------------------------hHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          203 TNLFKHS-----------------------------------------------AVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       203 t~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                      |++....                                               .......+..|..+..+|+|+|+.++
T Consensus       222 T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~  301 (329)
T d1uh5a_         222 SRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVAS  301 (329)
T ss_dssp             CTTGGGCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHH
T ss_pred             chhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHH
Confidence            9542221                                               12223344457888899999999999


Q ss_pred             HHhcCCCccCCCceeec-cCcc
Q 023054          236 YVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ||+| +.++++||+.|. |+|.
T Consensus       302 fLaS-d~s~~iTGq~i~VDGG~  322 (329)
T d1uh5a_         302 FLLS-RESRAITGQTIYVDNGL  322 (329)
T ss_dssp             HHHS-GGGTTCCSCEEEESTTG
T ss_pred             HHhC-chhCCccCCeEEECCCc
Confidence            9997 899999999887 5664

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=4.8e-38  Score=265.06  Aligned_cols=252  Identities=15%  Similarity=0.097  Sum_probs=186.4

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|  |||+++|+.|+++|++|++++|+++ +++..+++...  +....++.+|+++.++++++++++.+.++++|
T Consensus         9 lITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id   85 (274)
T d2pd4a1           9 LIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVKKDLGSLD   85 (274)
T ss_dssp             EEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHHHTSCEE
T ss_pred             EEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHHHHcCCCC
Confidence            6999765  9999999999999999999999954 44455566665  34567889999999999999999999999999


Q ss_pred             eEEEccccCCCCC---CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFCPY---QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ++|||+|+.....   ....+.+.....++....+.+.......+...+.    .+.|+++|+.....            
T Consensus        86 ~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~s~~~~~~------------  149 (274)
T d2pd4a1          86 FIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN----GASVLTLSYLGSTK------------  149 (274)
T ss_dssp             EEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----EEEEEEEECGGGTS------------
T ss_pred             eEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc----Ccceeeeccccccc------------
Confidence            9999999875422   2222333333333333333333333333322221    34466666655443            


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChH----HHHHHHHHHhhhcCChHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAV----VMRFLKFFSFFLWKNVPQGA  231 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~a  231 (288)
                         ..+....|+++|+|+.+++|+++.+++++|  ||||+|+||++.|++......    ........+..++.+|+|+|
T Consensus       150 ---~~~~~~~y~asK~al~~ltr~lA~e~~~~G--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA  224 (274)
T d2pd4a1         150 ---YMAHYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVG  224 (274)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHH
T ss_pred             ---ccccchhhhHHHHHHHHHHHhhHHHhcCcC--ceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHH
Confidence               355667899999999999999999999999  999999999999999865522    22233345667788999999


Q ss_pred             HHHHHHhcCCCccCCCceeec-cCccC--CCCccccCHHHHHHHHHHHH
Q 023054          232 ATTCYVALHPNLKGVTGKYFL-DCNEM--PPSALARDETLAKKLWDFSN  277 (288)
Q Consensus       232 ~~~~~l~~~~~~~~~tG~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~  277 (288)
                      +.++||+| +.+.++||+.|. |+|+.  ........++.++.+|+..+
T Consensus       225 ~~v~fL~S-~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~~~~~~~~~~  272 (274)
T d2pd4a1         225 NAGMYLLS-SLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHK  272 (274)
T ss_dssp             HHHHHHHS-GGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSS
T ss_pred             HHHHHHhC-hhhCCCcCceEEECCChhhccCCcccccccchhhhhhhhc
Confidence            99999998 889999999777 77763  33344567788899999765

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6.7e-37  Score=260.90  Aligned_cols=233  Identities=17%  Similarity=0.103  Sum_probs=182.1

Q ss_pred             CcccCCC--hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCC---------CCc-eEEEEec------------
Q 023054            1 MLAGGAS--GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDD---------TAR-VDTLKLD------------   56 (288)
Q Consensus         1 lItGas~--gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~-~~~~~~D------------   56 (288)
                      |||||++  |||+++|+.|+++|++|++++|++...............         ... -....+|            
T Consensus        12 lVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   91 (297)
T d1d7oa_          12 FIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVPED   91 (297)
T ss_dssp             EEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSCHH
T ss_pred             EEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccchhh
Confidence            6999875  999999999999999999999987654433332221110         000 1222333            


Q ss_pred             --------CCChHHHHHHHHHHHhcCCCcceEEEccccCCC----CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhh
Q 023054           57 --------LSSIASIKDFAQNFIALNLPLNILINNAGIMFC----PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTA  124 (288)
Q Consensus        57 --------l~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  124 (288)
                              .++..+++++++++.+.+++||+||||||....    ..+.+.++|++.+++|+.+++.++++++|.+.+  
T Consensus        92 v~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--  169 (297)
T d1d7oa_          92 VKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP--  169 (297)
T ss_dssp             HHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--
T ss_pred             hhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhc--
Confidence                    356667889999999999999999999997532    346788999999999999999999999988866  


Q ss_pred             ccCCCCCeEEEEcCccccccccCCccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhc-ccCCceEEEEeeCCcccC
Q 023054          125 KETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQ-EEGVNITANSVHPGLIMT  203 (288)
Q Consensus       125 ~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~~~i~v~~v~PG~v~t  203 (288)
                           .++++++++......              ..+....|+++|+++..+++.++.+++ ++|  ||||+|+||++.|
T Consensus       170 -----~g~~~~~~~~~~~~~--------------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~g--IrvN~I~PG~i~T  228 (297)
T d1d7oa_         170 -----GGASISLTYIASERI--------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQN--IRVNTISAGPLGS  228 (297)
T ss_dssp             -----EEEEEEEECGGGTSC--------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCCBC
T ss_pred             -----CCcceeeeehhhccc--------------ccccccceecccccccccccccchhccccce--EEecccccccccc
Confidence                 357777777665532              235567899999999999999999997 578  9999999999999


Q ss_pred             CCCCCChHH----HHHHHHHHhhhcCChHHHHHHHHHHhcCCCccCCCceeec-cCccC
Q 023054          204 NLFKHSAVV----MRFLKFFSFFLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNEM  257 (288)
Q Consensus       204 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~~  257 (288)
                      ++.......    .......|..++.+|+|+|+.++||+| +.++++||+.|. |+|+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S-~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         229 RAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVS-PLASAITGATIYVDNGLN  286 (297)
T ss_dssp             CCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             hhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-chhcCCcCceEEECcCHh
Confidence            998865322    234445567788899999999999997 899999999877 66653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.2e-36  Score=250.00  Aligned_cols=221  Identities=20%  Similarity=0.198  Sum_probs=177.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+++              ..+...+++|+++......+........ ..+.+
T Consensus         5 lITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~   69 (241)
T d1uaya_           5 LVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEA-PLFAV   69 (241)
T ss_dssp             EEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHS-CEEEE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhccc-cccch
Confidence            69999999999999999999999999999853              3457788999999999999888877665 45566


Q ss_pred             EEccccCCC------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhc-cCCCCCeEEEEcCccccccccCCccccC
Q 023054           81 INNAGIMFC------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAK-ETGIEGRIVNLSSIAHQYTYKGGIRFQK  153 (288)
Q Consensus        81 v~~ag~~~~------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~~~~~  153 (288)
                      +++++....      ....+.+.+++.+++|+.+.+.+++.+.+.+.+... .....|+||++||..+..+         
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~---------  140 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG---------  140 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC---------
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC---------
Confidence            666655322      123455778899999999999999999998755321 1123689999999998874         


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHH--HHHHHHh-hhcCChHHH
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMR--FLKFFSF-FLWKNVPQG  230 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~~-~~~~~~~~~  230 (288)
                            .++..+|+++|+|+.+|+|+++.|++++|  ||||+|+||+++|++.........  .....+. .++.+|+|+
T Consensus       141 ------~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedv  212 (241)
T d1uaya_         141 ------QIGQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEY  212 (241)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHH
T ss_pred             ------CCCchhhHHHHHHHHHHHHHHHHHHhhcC--CceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHH
Confidence                  67789999999999999999999999999  999999999999998766532211  1222222 567799999


Q ss_pred             HHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          231 AATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       231 a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      |+.++||++   .+++||+.|. |+|+
T Consensus       213 A~~v~fL~s---~~~iTG~~i~VDGG~  236 (241)
T d1uaya_         213 AALVLHILE---NPMLNGEVVRLDGAL  236 (241)
T ss_dssp             HHHHHHHHH---CTTCCSCEEEESTTC
T ss_pred             HHHHHHHHh---CCCCCCCEEEECCcc
Confidence            999999997   2699999887 6664

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1e-36  Score=251.01  Aligned_cols=213  Identities=9%  Similarity=0.003  Sum_probs=172.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh--cCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA--LNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--~~~~id   78 (288)
                      |||||++|||+++|++|+++|++|++++|++...            ......+.+|+.+.+......+.+..  .+++||
T Consensus         6 lITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD   73 (235)
T d1ooea_           6 IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   73 (235)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence            6999999999999999999999999999986421            23455667788887777776666665  468999


Q ss_pred             eEEEccccCCCC---CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFCP---YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||+....   .+.+.+.|+.++++|+.+++.++++++|+|++       +|+||++||..+..+           
T Consensus        74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~Iv~isS~~~~~~-----------  135 (235)
T d1ooea_          74 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMGP-----------  135 (235)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSC-----------
T ss_pred             EEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-------ceEEEEeccHHhcCC-----------
Confidence            999999975432   23334678899999999999999999999965       479999999998763           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTC  235 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  235 (288)
                          .+...+|++||+|+.+|+++|+.|++..+.+|+||+|+||+++|++.+..      ........+.+|+++++.++
T Consensus       136 ----~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~------~~~~~~~~~~~~~~va~~~~  205 (235)
T d1ooea_         136 ----TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW------MPNADHSSWTPLSFISEHLL  205 (235)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH------STTCCGGGCBCHHHHHHHHH
T ss_pred             ----cccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhh------CcCCccccCCCHHHHHHHHH
Confidence                77889999999999999999999999644459999999999999875422      11122345678999999998


Q ss_pred             HHhcCCCccCCCceeecc
Q 023054          236 YVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       236 ~l~~~~~~~~~tG~~~~~  253 (288)
                      +++.++..+++||..+..
T Consensus       206 ~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         206 KWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHHHCGGGCCCTTCEEEE
T ss_pred             HHhcCccccCCCceEEEE
Confidence            777657888999998753

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-36  Score=250.34  Aligned_cols=209  Identities=14%  Similarity=0.082  Sum_probs=171.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc--CCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL--NLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~--~~~id   78 (288)
                      |||||++|||+++|+.|+++|++|+++++++...            ......+.+|..+.++.+.+...+.+.  .+++|
T Consensus         6 lITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           6 LVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             EEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            6999999999999999999999999999876421            234566778888888888888877665  34799


Q ss_pred             eEEEccccCCC---CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           79 ILINNAGIMFC---PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        79 ~lv~~ag~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      +||||||....   ..+.+.+.|++.+++|+.+++.+++.++|+|++       +|+||++||.++..+           
T Consensus        74 ~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~~-----------  135 (236)
T d1dhra_          74 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALDG-----------  135 (236)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSC-----------
T ss_pred             EEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc-------ccceeEEccHHHcCC-----------
Confidence            99999996543   224455789999999999999999999999955       589999999998763           


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcc--cCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhhhcCChHHHHHH
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQE--EGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~--~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                          .+...+|++||+|+.+|+++|+.|++.  +|  |+||+|+||+++|+|.+...      .......+.+|+++|+.
T Consensus       136 ----~~~~~~Y~asKaal~~lt~~la~El~~~~~g--I~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~pe~va~~  203 (236)
T d1dhra_         136 ----TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNRKSM------PEADFSSWTPLEFLVET  203 (236)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHHHHS------TTSCGGGSEEHHHHHHH
T ss_pred             ----ccCCcccHHHHHHHHHHHHHHHHHhccCCCc--EEEEEEEeccCcCCcchhhC------ccchhhcCCCHHHHHHH
Confidence                677889999999999999999999984  56  99999999999998754221      11122455689999999


Q ss_pred             HHHHhcCCCccCCCceeec
Q 023054          234 TCYVALHPNLKGVTGKYFL  252 (288)
Q Consensus       234 ~~~l~~~~~~~~~tG~~~~  252 (288)
                      +.+|++ +...+++|.++.
T Consensus       204 ~~~l~s-~~~~~i~G~~i~  221 (236)
T d1dhra_         204 FHDWIT-GNKRPNSGSLIQ  221 (236)
T ss_dssp             HHHHHT-TTTCCCTTCEEE
T ss_pred             HHHHhC-CCccCCCCCeEE
Confidence            999997 788999998654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=2.1e-35  Score=248.02  Aligned_cols=226  Identities=17%  Similarity=0.123  Sum_probs=173.9

Q ss_pred             CcccC--CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc---CC
Q 023054            1 MLAGG--ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL---NL   75 (288)
Q Consensus         1 lItGa--s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~---~~   75 (288)
                      |||||  ++|||+++|++|+++|++|++++|+.++..+   ++.++. +.+...++||+++++++..+++.+.+.   ++
T Consensus        10 lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~   85 (268)
T d2h7ma1          10 LVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIGAGN   85 (268)
T ss_dssp             EECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHCTTC
T ss_pred             EEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-CCceeeEeeecccccccccccchhhhccccCC
Confidence            69994  5799999999999999999999999876533   233332 466788999999999999999998765   46


Q ss_pred             CcceEEEccccCCC-------CCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCC
Q 023054           76 PLNILINNAGIMFC-------PYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGG  148 (288)
Q Consensus        76 ~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  148 (288)
                      .+|++|||+|+...       ..+.+.+.+...+.+|+.+.+.+.+...+++..        +.+++++|.....     
T Consensus        86 ~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~s~~~~~-----  152 (268)
T d2h7ma1          86 KLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--------GGSIVGMDFDPSR-----  152 (268)
T ss_dssp             CEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEECCCSS-----
T ss_pred             CcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc--------ccccccccccccc-----
Confidence            79999999997642       124455677788899999998888877665432        3444444444333     


Q ss_pred             ccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC------hH--------HHH
Q 023054          149 IRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS------AV--------VMR  214 (288)
Q Consensus       149 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~------~~--------~~~  214 (288)
                                ..+....|+++|+|+.+|+++++.+++++|  ||||+|+||+++|++....      ..        ...
T Consensus       153 ----------~~p~~~~y~~sK~a~~~ltr~lA~e~~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  220 (268)
T d2h7ma1         153 ----------AMPAYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEG  220 (268)
T ss_dssp             ----------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred             ----------cCcccchhhccccchhhccccchhhhhccC--CcceEEecCCCCChhhhhhccchhhhhhccchHHHHHH
Confidence                      366778999999999999999999999999  9999999999999875422      00        111


Q ss_pred             HHHHHHhhh-cCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          215 FLKFFSFFL-WKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       215 ~~~~~~~~~-~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      ..+..|..+ ..+|+|+|+.++||++ +.+.++||+.|. |+|.
T Consensus       221 ~~~~~pl~rr~~~p~dva~~v~fL~S-d~a~~iTG~~i~vDGG~  263 (268)
T d2h7ma1         221 WDQRAPIGWNMKDATPVAKTVCALLS-DWLPATTGDIIYADGGA  263 (268)
T ss_dssp             HHHHCTTCCCTTCCHHHHHHHHHHHS-SSCTTCCSEEEEESTTG
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHHHhC-chhcCccCCEEEECcCc
Confidence            112233333 6799999999999997 899999999776 6665

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.2e-32  Score=229.62  Aligned_cols=224  Identities=21%  Similarity=0.215  Sum_probs=159.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhc-CCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIAL-NLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~id~   79 (288)
                      |||||++|||+++|++|+++|++|++++|++++                   ..+|+.+....+....+.... .+.+|+
T Consensus         5 lITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~id~   65 (257)
T d1fjha_           5 VISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             EEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCCCcE
Confidence            699999999999999999999999999997531                   357999998888776655544 567999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc-------
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ-------  152 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~-------  152 (288)
                      +|+|||+..     ..+.+.....+|+.+...+.+...+.+.+..     ...+.++.+..............       
T Consensus        66 lv~~Ag~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  135 (257)
T d1fjha_          66 LVLCAGLGP-----QTKVLGNVVSVNYFGATELMDAFLPALKKGH-----QPAAVVISSVASAHLAFDKNPLALALEAGE  135 (257)
T ss_dssp             EEECCCCCT-----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-----SCEEEEECCGGGGSSCGGGCTTHHHHHHTC
T ss_pred             EEEcCCCCC-----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-----cCcceeeeeccccchhhhhhhhhhhccCCc
Confidence            999999753     3356788899999999999999999887654     34566665544332100000000       


Q ss_pred             -----CC-CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHH----HHH-HHh
Q 023054          153 -----KI-NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRF----LKF-FSF  221 (288)
Q Consensus       153 -----~~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~----~~~-~~~  221 (288)
                           .. ......++..+|++||+|+.+|+|+++.||+++|  ||||+|+||+++|++.+........    .+. .|.
T Consensus       136 ~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Pl  213 (257)
T d1fjha_         136 EAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM  213 (257)
T ss_dssp             HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------------------CCCST
T ss_pred             EEEEeeehhccCCCcchHHHHHHhhhhhcccccccccccccc--ccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCC
Confidence                 00 0001223456799999999999999999999999  9999999999999997654211111    111 367


Q ss_pred             hhcCChHHHHHHHHHHhcCCCccCCCceeec-cCcc
Q 023054          222 FLWKNVPQGAATTCYVALHPNLKGVTGKYFL-DCNE  256 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~-~~~~  256 (288)
                      .++.+|+|+|+.++||+| ++++++||+.|. |+|+
T Consensus       214 gR~g~p~eva~~v~fL~S-~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         214 GRRAEPSEMASVIAFLMS-PAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTH
T ss_pred             CCCcCHHHHHHHHHHHhC-chhCCccCceEEeCCCc
Confidence            788899999999999997 899999999887 6765

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.96  E-value=9.9e-30  Score=212.05  Aligned_cols=205  Identities=19%  Similarity=0.180  Sum_probs=156.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCCh---HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNM---AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||++|||+++|++|+++|+ +|++++|+.   +..++..+++...  +.++.++.||++|.++++++++.+.+. ++
T Consensus        13 lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~~~-~~   89 (259)
T d2fr1a1          13 LVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIGDD-VP   89 (259)
T ss_dssp             EEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCTT-SC
T ss_pred             EEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhcccccc-cc
Confidence            6999999999999999999999 699999975   3455566666554  678999999999999999999987664 58


Q ss_pred             cceEEEccccCCCC--CCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           77 LNILINNAGIMFCP--YQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        77 id~lv~~ag~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      +|.||||+|.....  .+.+.++|+..+++|+.+++++.+.+.+    ..     .++||++||..+..+          
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~----~~-----~~~iv~~SS~a~~~g----------  150 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD-----LTAFVLFSSFASAFG----------  150 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-----CSEEEEEEEHHHHTC----------
T ss_pred             ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc----cC-----CceEeeecchhhccC----------
Confidence            99999999987653  3677888999999999999998775433    22     579999999999874          


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC-CCCCChHHHHHHHHHHhhhcCChHHHHHH
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN-LFKHSAVVMRFLKFFSFFLWKNVPQGAAT  233 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  233 (288)
                           .++...|+++|+++++|++    +++.+|  +++++|+||.+.++ |.... ....+ .. ......+|+++++.
T Consensus       151 -----~~~~~~YaAaka~l~~la~----~~~~~G--i~v~~I~pg~~~~~g~~~~~-~~~~~-~~-~G~~~~~~~~~~~~  216 (259)
T d2fr1a1         151 -----APGLGGYAPGNAYLDGLAQ----QRRSDG--LPATAVAWGTWAGSGMAEGP-VADRF-RR-HGVIEMPPETACRA  216 (259)
T ss_dssp             -----CTTCTTTHHHHHHHHHHHH----HHHHTT--CCCEEEEECCBC-------------C-TT-TTEECBCHHHHHHH
T ss_pred             -----CcccHHHHHHHHhHHHHHH----HHHhCC--CCEEECCCCcccCCccccch-HHHHH-Hh-cCCCCCCHHHHHHH
Confidence                 7778899999999877655    555668  99999999998654 33221 11110 00 01223589999999


Q ss_pred             HHHHhcCC
Q 023054          234 TCYVALHP  241 (288)
Q Consensus       234 ~~~l~~~~  241 (288)
                      +..++..+
T Consensus       217 l~~~l~~~  224 (259)
T d2fr1a1         217 LQNALDRA  224 (259)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhCC
Confidence            99998644

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.2e-19  Score=157.26  Aligned_cols=215  Identities=11%  Similarity=0.022  Sum_probs=147.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-----ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||||.||++++++|.++|++|++++|....     .+.........  ..++.++.+|++|.+++.++++..     
T Consensus         5 LITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-----   77 (357)
T d1db3a_           5 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTC--NPKFHLHYGDLSDTSNLTRILREV-----   77 (357)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH-----
T ss_pred             EEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhc--CCCeEEEEeecCCHHHHHHHHhcc-----
Confidence            699999999999999999999999999985432     22222221111  457999999999999999998876     


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      .+|+++|+|+.....  .+.++...++++|+.++.++++++...-.+.      ..++|++||...+ +.+   ...+++
T Consensus        78 ~~d~v~h~aa~~~~~--~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~------~~r~i~~SS~~vY-G~~---~~~~~~  145 (357)
T d1db3a_          78 QPDEVYNLGAMSHVA--VSFESPEYTADVDAMGTLRLLEAIRFLGLEK------KTRFYQASTSELY-GLV---QEIPQK  145 (357)
T ss_dssp             CCSEEEECCCCCTTT--TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT------TCEEEEEEEGGGG-TTC---CSSSBC
T ss_pred             CCCEEEEeecccccc--hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC------CcEEEEEEchhhh-CCC---CCCCcC
Confidence            789999999986543  2446678899999999999999886542221      3579999986543 211   122445


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHH---h-----------
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFS---F-----------  221 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---~-----------  221 (288)
                      +.....+...|+.||.+.+.+++.+++.++     +.+..+.|+.+-.|..........+...+.   .           
T Consensus       146 E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~-----l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~  220 (357)
T d1db3a_         146 ETTPFYPRSPYAVAKLYAYWITVNYRESYG-----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNM  220 (357)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCT
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCC
Confidence            555556778899999999999999888764     667778888887765332211111211111   0           


Q ss_pred             ---hhcCChHHHHHHHHHHhc
Q 023054          222 ---FLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       222 ---~~~~~~~~~a~~~~~l~~  239 (288)
                         +-+...+|++++++.++.
T Consensus       221 ~~~r~~~~v~D~~~a~~~~~~  241 (357)
T d1db3a_         221 DSLRDWGHAKDYVKMQWMMLQ  241 (357)
T ss_dssp             TCEECCEEHHHHHHHHHHTTS
T ss_pred             CeeecceeechHHHHHHHHHh
Confidence               012356799999988885

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.74  E-value=3.8e-17  Score=140.45  Aligned_cols=218  Identities=11%  Similarity=0.025  Sum_probs=148.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||++++++|.++|++|+.+.|+..+...+..............++..|+.|..++.+++.       .+|++
T Consensus        15 lVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~~~v   87 (342)
T d1y1pa1          15 LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAAGV   87 (342)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------cchhh
Confidence            69999999999999999999999999999988776665544444434445667789999887666543       68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcccc--------
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQ--------  152 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~--------  152 (288)
                      +|+++....     .......+..|+.++.++++.+.....        -.++|++||..............        
T Consensus        88 ~~~a~~~~~-----~~~~~~~~~~nv~gt~~ll~~~~~~~~--------v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~  154 (342)
T d1y1pa1          88 AHIASVVSF-----SNKYDEVVTPAIGGTLNALRAAAATPS--------VKRFVLTSSTVSALIPKPNVEGIYLDEKSWN  154 (342)
T ss_dssp             EECCCCCSC-----CSCHHHHHHHHHHHHHHHHHHHHTCTT--------CCEEEEECCGGGTCCCCTTCCCCEECTTCCC
T ss_pred             hhhcccccc-----cccccccccchhhhHHHHHHhhhcccc--------cccccccccceeeccCCCCCCCccccccccc
Confidence            999986532     233466788899999988887754311        35899999976554322211100        


Q ss_pred             --------CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC---hHHHHHHHHHHh
Q 023054          153 --------KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS---AVVMRFLKFFSF  221 (288)
Q Consensus       153 --------~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~  221 (288)
                              .+.+.....+...|+.+|.+.+.+++.++++....   +++.+|+|+.+..+.....   .....+...+..
T Consensus       155 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~---~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~  231 (342)
T d1y1pa1         155 LESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPH---FTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFN  231 (342)
T ss_dssp             HHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCS---SEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHT
T ss_pred             cccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccc---cccceecccceeCCCCCccccccchHHHHHHHHc
Confidence                    12233344466789999999999999888876543   8888899988866543211   122222222111


Q ss_pred             ------------hhcCChHHHHHHHHHHhcCC
Q 023054          222 ------------FLWKNVPQGAATTCYVALHP  241 (288)
Q Consensus       222 ------------~~~~~~~~~a~~~~~l~~~~  241 (288)
                                  ..+..+.|+|...+.++.++
T Consensus       232 g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~  263 (342)
T d1y1pa1         232 GEVSPALALMPPQYYVSAVDIGLLHLGCLVLP  263 (342)
T ss_dssp             TCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT
T ss_pred             CCcCcccCCccceeeeeHHHHHHHHHHhhcCc
Confidence                        11346789999988887543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.8e-17  Score=141.28  Aligned_cols=218  Identities=11%  Similarity=0.007  Sum_probs=146.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA-----ANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||+|.||++++++|.++|++|+.++|....     .+........ ....++.++.+|++|.+.+..++...     
T Consensus         5 LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   78 (347)
T d1t2aa_           5 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-HIEGNMKLHYGDLTDSTCLVKIINEV-----   78 (347)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh-hccCCcEEEEeecCCchhhHHHHhhc-----
Confidence            699999999999999999999999999985421     1111111111 11356899999999999999998876     


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      .+++++|+++.....  ...+.....+++|+.++.+++.++.......      ..++|++||.+-+ +.   ....+++
T Consensus        79 ~~~~v~~~~a~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~------~~~~i~~SS~~vy-g~---~~~~~~~  146 (347)
T d1t2aa_          79 KPTEIYNLGAQSHVK--ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN------SVKFYQASTSELY-GK---VQEIPQK  146 (347)
T ss_dssp             CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT------TCEEEEEEEGGGT-CS---CSSSSBC
T ss_pred             ccceeeeeeeccccc--hhhccchhhhhhHHHHHHHHHHHHHHcCCCC------CcEEEEecchhee-cC---CCCCCCC
Confidence            788999998865322  2234456678999999999998876543221      2479999986543 22   1223455


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHH---------------
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFS---------------  220 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---------------  220 (288)
                      +...+.+...|+.||.+.+.++..+++++.     +.+..+.|+.+-.|..............+.               
T Consensus       147 E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~-----~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g  221 (347)
T d1t2aa_         147 ETTPFYPRSPYGAAKLYAYWIVVNFREAYN-----LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNL  221 (347)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCT
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCC
Confidence            555666778899999999999988877753     667778887776653322211111111111               


Q ss_pred             --hhhcCChHHHHHHHHHHhcCC
Q 023054          221 --FFLWKNVPQGAATTCYVALHP  241 (288)
Q Consensus       221 --~~~~~~~~~~a~~~~~l~~~~  241 (288)
                        .+.+...+|+++++..++.+.
T Consensus       222 ~~~r~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         222 DAKRDWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             TCEECCEEHHHHHHHHHHHHHSS
T ss_pred             cceeeeeEecHHHHHHHHHhhcC
Confidence              011235679999999998743

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=1.1e-17  Score=143.99  Aligned_cols=177  Identities=16%  Similarity=0.127  Sum_probs=127.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH----HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA----AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||+|.||++++++|+++|++|+++++-..    ..... ..+.    ..++.++.+|++|.+.++.++...     +
T Consensus         5 LVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~-~~~~----~~~v~~~~~Dl~d~~~l~~~~~~~-----~   74 (347)
T d1z45a2           5 LVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARL-EVLT----KHHIPFYEVDLCDRKGLEKVFKEY-----K   74 (347)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHH-HHHH----TSCCCEEECCTTCHHHHHHHHHHS-----C
T ss_pred             EEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhH-Hhhc----ccCCeEEEeecCCHHHHHHHHhcc-----C
Confidence            69999999999999999999999999875221    11111 1111    356889999999999999887653     7


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +|+|||+|+......  ..+.....+.+|+.++.+++.++...-         -.++|++||...+..........++++
T Consensus        75 ~d~VihlAa~~~~~~--~~~~~~~~~~~N~~~t~~ll~~~~~~~---------i~~~i~~SS~~vyg~~~~~~~~~~~~e  143 (347)
T d1z45a2          75 IDSVIHFAGLKAVGE--STQIPLRYYHNNILGTVVLLELMQQYN---------VSKFVFSSSATVYGDATRFPNMIPIPE  143 (347)
T ss_dssp             CCEEEECCSCCCHHH--HHHSHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCCGGGSTTCCSBCT
T ss_pred             CCEEEEccccccccc--cccCcccccccchhhhHHHHHHHHhcc---------cceEEeecceeeecCcccCCCCCcccc
Confidence            999999999764322  224457788999999999999986432         248999999876643333333344555


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcc
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLI  201 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v  201 (288)
                      .....+...|+.+|.+.+.+++.+.+.....   +.+..+.|+.+
T Consensus       144 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~---~~~~~lR~~~v  185 (347)
T d1z45a2         144 ECPLGPTNPYGHTKYAIENILNDLYNSDKKS---WKFAILRYFNP  185 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHSTTS---CEEEEEEECEE
T ss_pred             ccCCCCCChhHhHHHHHHHHHHHHHHhhccC---CcEEEEeecce
Confidence            5556677889999999999888887654433   55666655444

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=1e-17  Score=143.77  Aligned_cols=176  Identities=15%  Similarity=0.079  Sum_probs=126.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCCh----HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNM----AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||+|.||.++++.|+++|++|++++|-.    ..... .+.+.    ..++.++++|++|.+.+.++++..     +
T Consensus         4 LItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~d~~~l~~~~~~~-----~   73 (338)
T d1udca_           4 LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPV-IERLG----GKHPTFVEGDIRNEALMTEILHDH-----A   73 (338)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHH-HHHHH----TSCCEEEECCTTCHHHHHHHHHHT-----T
T ss_pred             EEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHH-HHhhc----CCCCEEEEeecCCHHHHHHHHhcc-----C
Confidence            6999999999999999999999999997622    11121 12221    357999999999999998888754     6


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      +|+|||+|+.....  .+.++....+++|+.++.++++++...-         -.++|++||.+.+...+.   ....+.
T Consensus        74 ~d~ViHlAa~~~~~--~~~~~~~~~~~~Nv~gt~nlL~~~~~~~---------v~~~i~~Ss~~vy~~~~~---~~~~e~  139 (338)
T d1udca_          74 IDTVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMRAAN---------VKNFIFSSSATVYGDQPK---IPYVES  139 (338)
T ss_dssp             CSEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCSCCS---SSBCTT
T ss_pred             CCEEEECCCccchh--hHHhCHHHHHHhHHHHHHHHHHHHHHhC---------CCEEEecCcceEEccccc---cccccc
Confidence            99999999965322  2334567899999999999999887542         247899888765532211   112223


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN  204 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~  204 (288)
                      .....+...|+.+|.+.+.+.+....+..  +  +.+..+.|+.+-++
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~ilR~~~v~G~  183 (338)
T d1udca_         140 FPTGTPQSPYGKSKLMVEQILTDLQKAQP--D--WSIALLRYFNPVGA  183 (338)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHHST--T--CEEEEEEECEEECC
T ss_pred             cccCCCcchHHHHHhhhhHHHHHHHhhcc--C--CeEEEEeeccEEec
Confidence            33445678899999999998887776643  3  66767777766554

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.71  E-value=1.9e-17  Score=143.42  Aligned_cols=226  Identities=13%  Similarity=0.107  Sum_probs=149.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEE-EeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|.||++++++|++.|+.|++ +++......  ...+.......++.++.+|++|...+..+++..     ++|+
T Consensus         4 LItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (361)
T d1kewa_           4 LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCE
Confidence            69999999999999999999997544 443221100  111112222457999999999999999888765     7999


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCc------cccC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGI------RFQK  153 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~------~~~~  153 (288)
                      |||+|+.....  .+.++...++++|+.++..+++++...............++|++||...+.......      ....
T Consensus        77 VihlAa~~~~~--~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~  154 (361)
T d1kewa_          77 VMHLAAESHVD--RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPL  154 (361)
T ss_dssp             EEECCSCCCHH--HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC
T ss_pred             EEECccccchh--hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCC
Confidence            99999875432  233456789999999999999999876542100000035899999977553211110      0111


Q ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh------------
Q 023054          154 INDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF------------  221 (288)
Q Consensus       154 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------------  221 (288)
                      ..+.....+...|+.||.+.+.+++.++.+++     +.+.++.|+.+-.|..........+......            
T Consensus       155 ~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~-----i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~  229 (361)
T d1kewa_         155 FTETTAYAPSSPYSASKASSDHLVRAWRRTYG-----LPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQ  229 (361)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCC
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCe
Confidence            12334455667899999999999999887763     7777888888877654322222233222211            


Q ss_pred             -hhcCChHHHHHHHHHHhcC
Q 023054          222 -FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 -~~~~~~~~~a~~~~~l~~~  240 (288)
                       +-+...+|+|++++.++.+
T Consensus       230 ~r~~i~v~D~a~ai~~~~~~  249 (361)
T d1kewa_         230 IRDWLYVEDHARALHMVVTE  249 (361)
T ss_dssp             EEEEEEHHHHHHHHHHHHHH
T ss_pred             EEeCEEHHHHHHHHHHHHhc
Confidence             1123678999999999863

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.70  E-value=5.7e-19  Score=139.41  Aligned_cols=105  Identities=15%  Similarity=0.200  Sum_probs=88.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||++|||+++|+.|+++|++|++++|+.++++++.+++...   .++.+..+|++|.+++++++       +++|+|
T Consensus        27 lItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~-------~~iDil   96 (191)
T d1luaa1          27 VVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAV-------KGAHFV   96 (191)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHT-------TTCSEE
T ss_pred             EEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc---cchhhhhhhcccHHHHHHHh-------cCcCee
Confidence            69999999999999999999999999999999999999888765   34567889999988877664       578999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhH
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLL  117 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  117 (288)
                      |||||+..  ...+.+.|+..+.+|+.+.+++...+.
T Consensus        97 in~Ag~g~--~~~~~e~~~~~~~~nv~~~~~~~~~~~  131 (191)
T d1luaa1          97 FTAGAIGL--ELLPQAAWQNESSIEIVADYNAQPPLG  131 (191)
T ss_dssp             EECCCTTC--CCBCHHHHHTCTTCCEEEECCCSSSCS
T ss_pred             eecCcccc--ccCCHHHHHhhhcceeehhHhhHHHHH
Confidence            99999753  245778899999999888877655543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=5.7e-16  Score=135.42  Aligned_cols=185  Identities=16%  Similarity=0.131  Sum_probs=125.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHH----------------HHHHHHHHHhhCCCCceEEEEecCCChHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAA----------------ANEARQLILKEDDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~----------------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |||||||.||.+++++|+++|++|++++.-...                ..+......... +.++.++.+|++|.+.++
T Consensus         5 LVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~~~l~   83 (393)
T d1i24a_           5 MVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDFEFLA   83 (393)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSHHHHH
T ss_pred             EEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCHHHHH
Confidence            699999999999999999999999998631111                111111111111 457899999999999999


Q ss_pred             HHHHHHHhcCCCcceEEEccccCCCCC-CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccc
Q 023054           65 DFAQNFIALNLPLNILINNAGIMFCPY-QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQY  143 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~  143 (288)
                      .+++..     ++|+|+|.|+...... ..+.+.....+.+|+.++.+++.++...-.        ..++++.||.....
T Consensus        84 ~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~--------~~~~i~~ss~~~~~  150 (393)
T d1i24a_          84 ESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE--------ECHLVKLGTMGEYG  150 (393)
T ss_dssp             HHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEECCGGGGC
T ss_pred             HHHHhh-----cchheeccccccccccccccccccccccccccccccHHHHHHHHhcc--------ccceeecccccccc
Confidence            998876     7999999998764322 234455667899999999999998765432        23566666655433


Q ss_pred             cccCCccc--cCC-------CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC
Q 023054          144 TYKGGIRF--QKI-------NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN  204 (288)
Q Consensus       144 ~~~~~~~~--~~~-------~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~  204 (288)
                      ........  ...       +......+...|+.+|.+.+.+++.++++.+     +++.++.|+.+..+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~-----l~~~~lR~~~v~G~  215 (393)
T d1i24a_         151 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-----IRATDLNQGVVYGV  215 (393)
T ss_dssp             CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECEEECS
T ss_pred             ccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccc-----eeeeecccccccCC
Confidence            21111111  000       0112234556799999999999988887765     67777777777554

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.69  E-value=3.7e-16  Score=132.73  Aligned_cols=215  Identities=13%  Similarity=0.046  Sum_probs=144.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||||.||++++++|.++|++|+.++|......  ...+.......++.++.+|++|.+.+..++...     ..+++
T Consensus         4 LItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~~   76 (321)
T d1rpna_           4 LVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQEV   76 (321)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-----ccccc
Confidence            69999999999999999999999999998653211  111222222357899999999999999888765     67788


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      +|+|+.....  ...+.....+.+|+.++.+++.++...-.        ..++++.||.. ..+   .......++....
T Consensus        77 ~~~a~~~~~~--~~~~~~~~~~~~n~~g~~~~l~~~~~~~~--------~~~~i~~Ss~~-~~~---~~~~~~~~E~~~~  142 (321)
T d1rpna_          77 YNLAAQSFVG--ASWNQPVTTGVVDGLGVTHLLEAIRQFSP--------ETRFYQASTSE-MFG---LIQAERQDENTPF  142 (321)
T ss_dssp             EECCSCCCHH--HHTTSHHHHHHHHTHHHHHHHHHHHHHCT--------TSEEEEEEEGG-GGC---SCSSSSBCTTSCC
T ss_pred             cccccccccc--ccccchHHHHhhhhhchHHHHHHHHHhCC--------Ccccccccchh-hcC---cccCCCCCCCCCc
Confidence            8888765332  12345678899999999999888755322        13555555543 443   2222334455566


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHH---HHHh--------------hh
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLK---FFSF--------------FL  223 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~~--------------~~  223 (288)
                      .+...|+.+|.+.+.+++.++.+..     +.+..+.|+.+-.|..........+..   ....              +-
T Consensus       143 ~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~  217 (321)
T d1rpna_         143 YPRSPYGVAKLYGHWITVNYRESFG-----LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRD  217 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEE
T ss_pred             cccChhHHHHHHHHHHHHHHHhhcC-----CcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEc
Confidence            6778999999999999998887764     566777777766665332211111111   1110              11


Q ss_pred             cCChHHHHHHHHHHhcCC
Q 023054          224 WKNVPQGAATTCYVALHP  241 (288)
Q Consensus       224 ~~~~~~~a~~~~~l~~~~  241 (288)
                      +...+|+|+.++.++.++
T Consensus       218 ~i~v~D~~~~~~~~~~~~  235 (321)
T d1rpna_         218 WGFAGDYVEAMWLMLQQD  235 (321)
T ss_dssp             CEEHHHHHHHHHHHHHSS
T ss_pred             cEEeHHHHHHHHHHHhcC
Confidence            346679999999998644

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=5.2e-16  Score=132.76  Aligned_cols=219  Identities=11%  Similarity=0.004  Sum_probs=146.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChH-----HHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMA-----AANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |||||||.||++++++|.++|++|+.++|...     +...+....... ....+.++.+|+++.+++...++..     
T Consensus         5 LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~~-----   78 (339)
T d1n7ha_           5 LITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDASSLRRWIDVI-----   78 (339)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc-cccceEEEEccccCHHHHHHHHhhh-----
Confidence            69999999999999999999999999998532     111111111111 1356889999999999999888764     


Q ss_pred             CcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCC
Q 023054           76 PLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN  155 (288)
Q Consensus        76 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~  155 (288)
                      ++|+|||+|+.....  ...+.....+..|+.++..++.++.....+...    ..+++..||......     .....+
T Consensus        79 ~~D~Vih~Aa~~~~~--~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~~~~~ss~~~~~~-----~~~~~~  147 (339)
T d1n7ha_          79 KPDEVYNLAAQSHVA--VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR----TVKYYQAGSSEMFGS-----TPPPQS  147 (339)
T ss_dssp             CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC----CCEEEEEEEGGGGTT-----SCSSBC
T ss_pred             ccchhhhcccccccc--ccccCccccccccccccchhhhhhhhccccccc----ceeeeecccceeccc-----CCCCCC
Confidence            799999999975432  123556788999999999999998766554321    234444444433221     112334


Q ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHH---H-----h------
Q 023054          156 DRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF---S-----F------  221 (288)
Q Consensus       156 ~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~-----~------  221 (288)
                      +.....+...|+.+|.+.+.++..+++..   +  +.+..+.|+.+-.|..........+....   .     .      
T Consensus       148 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~  222 (339)
T d1n7ha_         148 ETTPFHPRSPYAASKCAAHWYTVNYREAY---G--LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNL  222 (339)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCT
T ss_pred             CCCCCCCcchhhHHHHHHHHHHHHHHHHh---C--CCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCC
Confidence            45556678899999999999988888765   3  78888999888776543321111111111   0     0      


Q ss_pred             ---hhcCChHHHHHHHHHHhcCC
Q 023054          222 ---FLWKNVPQGAATTCYVALHP  241 (288)
Q Consensus       222 ---~~~~~~~~~a~~~~~l~~~~  241 (288)
                         +-+...+|+|..+..++.++
T Consensus       223 ~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         223 QASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             TCEEECEEHHHHHHHHHHHHTSS
T ss_pred             CccccceeeehHHHHHHHHHhcC
Confidence               01234779999999998643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=2.7e-15  Score=128.57  Aligned_cols=222  Identities=9%  Similarity=-0.029  Sum_probs=145.3

Q ss_pred             CcccCCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRK-AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |||||+|.||++++++|+++| ++|+++++......+..       ...++.++.+|+++.+.+.+.+..      ++|+
T Consensus         4 LITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~~------~~d~   70 (342)
T d2blla1           4 LILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK------KCDV   70 (342)
T ss_dssp             EEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH------HCSE
T ss_pred             EEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHHh------CCCc
Confidence            699999999999999999999 58999988654322221       145799999999988776553321      5899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc---cCCCC
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF---QKIND  156 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~---~~~~~  156 (288)
                      |||+|+......  ..++....+.+|+.++.++++++...          +.+++++||.............   .....
T Consensus        71 Vih~a~~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~----------~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~  138 (342)
T d2blla1          71 VLPLVAIATPIE--YTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (342)
T ss_dssp             EEECBCCCCHHH--HHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             cccccccccccc--cccCCccccccccccccccccccccc----------cccccccccccccccccccccccccccccc
Confidence            999999765421  22445678999999999999987432          3467777776655432222111   11222


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--------hHHHHHHHHHH--------
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--------AVVMRFLKFFS--------  220 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~--------  220 (288)
                      .....+...|+.||.+.+.+++.++++++     +.+..+.|..+..+.....        .....+...+.        
T Consensus       139 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  213 (342)
T d2blla1         139 GPVNKPRWIYSVSKQLLDRVIWAYGEKEG-----LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI  213 (342)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEG
T ss_pred             cccCCCcchhhhcccchhhhhhhhhcccC-----ceeEEeeccccccccccccccccccccccchHHHHHHHhCCCcccc
Confidence            33345667899999999999999888864     5666677766655422211        11222222211        


Q ss_pred             -----hhhcCChHHHHHHHHHHhcCCCccCCCceeecc
Q 023054          221 -----FFLWKNVPQGAATTCYVALHPNLKGVTGKYFLD  253 (288)
Q Consensus       221 -----~~~~~~~~~~a~~~~~l~~~~~~~~~tG~~~~~  253 (288)
                           .+-+...+|+++++..++.++ .....|..|+.
T Consensus       214 ~~g~~~r~~i~v~D~~~a~~~~~~~~-~~~~~g~~~Ni  250 (342)
T d2blla1         214 DGGKQKRCFTDIRDGIEALYRIIENA-GNRCDGEIINI  250 (342)
T ss_dssp             GGSCCEEECEEHHHHHHHHHHHHHCG-GGTTTTEEEEE
T ss_pred             CCCCeeeeecccccccceeeeehhhc-cccCCCeEEEE
Confidence                 111447789999999999743 33334666653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.64  E-value=1.6e-15  Score=129.29  Aligned_cols=167  Identities=16%  Similarity=0.145  Sum_probs=119.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC--hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN--MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|.||+++++.|+++|++|+++++-  .... .....+..   ..++.++.+|++|.+++.++++..     ++|
T Consensus         4 LVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~-~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~d   74 (338)
T d1orra_           4 LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGAT-DNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MPD   74 (338)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHH-HHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccch-hHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CCc
Confidence            699999999999999999999999998742  2222 22222322   357899999999999999988765     689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc-------
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF-------  151 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~-------  151 (288)
                      +|||+|+.....  ...++....+++|+.|+.++++++...-         ..+.+++||.......+.....       
T Consensus        75 ~Vih~aa~~~~~--~~~~~~~~~~~~Nv~gt~nll~~~~~~~---------~~~~i~~sS~~~~~~~~~~~~~~~~~~~~  143 (338)
T d1orra_          75 SCFHLAGQVAMT--TSIDNPCMDFEINVGGTLNLLEAVRQYN---------SNCNIIYSSTNKVYGDLEQYKYNETETRY  143 (338)
T ss_dssp             EEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHC---------TTCEEEEEEEGGGGTTCTTSCEEECSSCE
T ss_pred             eEEeeccccccc--ccccChHHHHHHHHHHHHHHHHhhhccc---------ccccccccccccccccccccccccccccc
Confidence            999999876432  1234567899999999999998775532         2356666666555443222111       


Q ss_pred             ------cCCCCCCCCCccccchhhHHHHHHHHHHHHHHhccc
Q 023054          152 ------QKINDRAGYSDKKAYGQSKLANILHANELSRRFQEE  187 (288)
Q Consensus       152 ------~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  187 (288)
                            ..........+...|+.+|...+.+.....+.+...
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~  185 (338)
T d1orra_         144 TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLN  185 (338)
T ss_dssp             EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             cccccccCcccCCccccccccccccchhhhhhhhhhhccCcc
Confidence                  112233445567889999999999998888887654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.62  E-value=2.6e-15  Score=128.63  Aligned_cols=211  Identities=14%  Similarity=0.060  Sum_probs=142.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCC----hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARN----MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||||.||++++++|.++|++|++++|.    ....+......... ...++.++.+|+.|.........       .
T Consensus        20 LVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~d~~~~~~~~~-------~   91 (341)
T d1sb8a_          20 LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK-QWSNFKFIQGDIRNLDDCNNACA-------G   91 (341)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH-HHTTEEEEECCTTSHHHHHHHHT-------T
T ss_pred             EEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc-ccCCeeEEeeccccccccccccc-------c
Confidence            699999999999999999999999999862    22222222111111 13468999999999887665433       6


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCC
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIND  156 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~  156 (288)
                      .+.++|.++.....  .+.++....+++|+.++.++++++...-         ..++|++||...+...    ...+.++
T Consensus        92 ~~~v~~~~a~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~~~~~~---------~~~~i~~SS~~vyg~~----~~~~~~E  156 (341)
T d1sb8a_          92 VDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDAK---------VQSFTYAASSSTYGDH----PGLPKVE  156 (341)
T ss_dssp             CSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHTT---------CSEEEEEEEGGGGTTC----CCSSBCT
T ss_pred             cccccccccccccc--ccccCccchhheeehhHHHHHHHHHhcC---------CceEEEcccceeeCCC----CCCCccC
Confidence            78888888765322  1345678899999999999998885431         2489999998765321    2223445


Q ss_pred             CCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC----hHHHHHHHHHHh-----------
Q 023054          157 RAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS----AVVMRFLKFFSF-----------  221 (288)
Q Consensus       157 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~-----------  221 (288)
                      .....+...|+.+|.+.+.+++.+++..+     +++..+.|+.+.++.....    .....+.+....           
T Consensus       157 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~  231 (341)
T d1sb8a_         157 DTIGKPLSPYAVTKYVNELYADVFSRCYG-----FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGE  231 (341)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSC
T ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHhC-----CCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCC
Confidence            55566778999999999999999887764     6666777877765532211    122222222211           


Q ss_pred             --hhcCChHHHHHHHHHHhc
Q 023054          222 --FLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       222 --~~~~~~~~~a~~~~~l~~  239 (288)
                        +-+...+|++.++..++.
T Consensus       232 ~~r~~i~v~D~~~a~~~~~~  251 (341)
T d1sb8a_         232 TSRDFCYIENTVQANLLAAT  251 (341)
T ss_dssp             CEECCEEHHHHHHHHHHHHT
T ss_pred             EEEEEEEEeccchhhhhhhh
Confidence              112345799999888885

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.62  E-value=1.5e-15  Score=130.40  Aligned_cols=215  Identities=14%  Similarity=0.104  Sum_probs=140.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||||.||++++++|.++|+.|.+++++..........+ ......++.++.+|++|.+.+..++.       ..|.+
T Consensus         6 LVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~~~v   77 (346)
T d1oc2a_           6 IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAA-------KADAI   77 (346)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH-HHhhcCCeEEEEccCCCHHHHHHHHh-------hhhhh
Confidence            69999999999999999999987655544310000000000 11124679999999999988887764       57889


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCC--------cccc
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGG--------IRFQ  152 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~--------~~~~  152 (288)
                      +|.|+......  ...+..+.+++|+.++.+++..+...          +.++|++||...+...+..        ....
T Consensus        78 ~~~a~~~~~~~--~~~~~~~~~~~N~~g~~nll~~~~~~----------~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~  145 (346)
T d1oc2a_          78 VHYAAESHNDN--SLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGHGEGPGE  145 (346)
T ss_dssp             EECCSCCCHHH--HHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTS
T ss_pred             hhhhhcccccc--hhhCcccceeeehHhHHhhhhhhccc----------cccccccccceEecccCccccccccccCccc
Confidence            99998764321  22446788999999999998776443          2477888776544221111        1112


Q ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh-----------
Q 023054          153 KINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF-----------  221 (288)
Q Consensus       153 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----------  221 (288)
                      .+.+.....+.+.|+.+|.+.+.+++.+++++   +  +++.++.|+.+-.|..........+......           
T Consensus       146 ~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~--i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~  220 (346)
T d1oc2a_         146 KFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK  220 (346)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSC
T ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCC
Confidence            33444455667889999999999999888775   4  8899999998887643322222222221111           


Q ss_pred             --hhcCChHHHHHHHHHHhcC
Q 023054          222 --FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 --~~~~~~~~~a~~~~~l~~~  240 (288)
                        +.+...+|+|++++.++.+
T Consensus       221 ~~r~~i~v~D~a~a~~~~~~~  241 (346)
T d1oc2a_         221 NVRDWIHTNDHSTGVWAILTK  241 (346)
T ss_dssp             CEEECEEHHHHHHHHHHHHHH
T ss_pred             ccccccchhhHHHHHHHHHhh
Confidence              1123566999998888753

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=1.9e-15  Score=127.91  Aligned_cols=163  Identities=14%  Similarity=0.091  Sum_probs=119.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||||.||++++++|+++|+.|+++++..                      .+|+.+.+.+.++++.-     .+|.+
T Consensus         6 lITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~-----~~d~v   58 (315)
T d1e6ua_           6 FIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----RIDQV   58 (315)
T ss_dssp             EEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhc-----CCCEE
Confidence            6999999999999999999999988775432                      25899999988887643     68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC-CccccCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG-GIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~~~~~~~~~~~  159 (288)
                      +|+|+...... ....+..+.+++|+.++.++++++...-         -.++|++||.+.+..... ........+...
T Consensus        59 ~~~a~~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---------v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          59 YLAAAKVGGIV-ANNTYPADFIYQNMMIESNIIHAAHQND---------VNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             EECCCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             EEcchhccccc-cchhhHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            99997654321 1234456678899999999988775431         248999999886643221 122222223333


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                      .++...|+.||.+.+.+++.+.++.   +  +++..+.|+.+-.|.
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPH  169 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCC
Confidence            4445679999999999999998776   4  788889998887654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1e-15  Score=121.90  Aligned_cols=185  Identities=12%  Similarity=-0.006  Sum_probs=119.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +||||||+||++++++|+++|++|+++.|+++++...        ....++++.+|++|.+++.++++       +.|+|
T Consensus         7 lV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~-------~~d~v   71 (205)
T d1hdoa_           7 AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------GQDAV   71 (205)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------TCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc-------CCCEE
Confidence            5899999999999999999999999999998764321        13568999999999998877765       68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||++|...+.   +.      .+++..++.+++++    +++.+     -.++|++||.........           ..
T Consensus        72 i~~~g~~~~~---~~------~~~~~~~~~~l~~a----a~~~~-----v~r~i~~ss~~~~~~~~~-----------~~  122 (205)
T d1hdoa_          72 IVLLGTRNDL---SP------TTVMSEGARNIVAA----MKAHG-----VDKVVACTSAFLLWDPTK-----------VP  122 (205)
T ss_dssp             EECCCCTTCC---SC------CCHHHHHHHHHHHH----HHHHT-----CCEEEEECCGGGTSCTTC-----------SC
T ss_pred             EEEeccCCch---hh------hhhhHHHHHHHHHH----HHhcC-----CCeEEEEeeeeccCCCcc-----------cc
Confidence            9999864321   11      13344454444443    44443     358999998765432111           12


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC-hHHHHHHHHHHhhhcCChHHHHHHHHHHhc
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS-AVVMRFLKFFSFFLWKNVPQGAATTCYVAL  239 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  239 (288)
                      +....|...|...+.+.       ...+  ++...|.||.+........ ....   .......+.+.+|+|+.++.++.
T Consensus       123 ~~~~~~~~~~~~~e~~l-------~~~~--~~~tiirp~~~~~~~~~~~~~~~~---~~~~~~~~i~~~DvA~~~~~~l~  190 (205)
T d1hdoa_         123 PRLQAVTDDHIRMHKVL-------RESG--LKYVAVMPPHIGDQPLTGAYTVTL---DGRGPSRVISKHDLGHFMLRCLT  190 (205)
T ss_dssp             GGGHHHHHHHHHHHHHH-------HHTC--SEEEEECCSEEECCCCCSCCEEES---SSCSSCSEEEHHHHHHHHHHTTS
T ss_pred             ccccccchHHHHHHHHH-------HhcC--CceEEEecceecCCCCcccEEEee---CCCCCCCcCCHHHHHHHHHHHhC
Confidence            23345666666654433       3456  8889999998853322211 0000   00011223578999999999996


Q ss_pred             CC
Q 023054          240 HP  241 (288)
Q Consensus       240 ~~  241 (288)
                      ++
T Consensus       191 ~~  192 (205)
T d1hdoa_         191 TD  192 (205)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.59  E-value=2.8e-15  Score=127.46  Aligned_cols=211  Identities=18%  Similarity=0.134  Sum_probs=143.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEE------EEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            1 MLAGGASGIGLETARVLALRKAHV------IIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      |||||+|.||+++++.|+++|+.|      +.++.......  ...+.......++.++..|+++........       
T Consensus         4 lItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   74 (322)
T d1r6da_           4 LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLAREL-------   74 (322)
T ss_dssp             EEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------
T ss_pred             EEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhhhcCCCeEEEEeccccchhhhccc-------
Confidence            699999999999999999999854      44432111000  001111112467999999999987666432       


Q ss_pred             CCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCC
Q 023054           75 LPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI  154 (288)
Q Consensus        75 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~  154 (288)
                      ..+|.++|+|+.....  .......+.+++|+.++..+++++...-         ..++|++||...+..    ....++
T Consensus        75 ~~~d~vi~~a~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~---------~~~~I~~Ss~~~yg~----~~~~~~  139 (322)
T d1r6da_          75 RGVDAIVHFAAESHVD--RSIAGASVFTETNVQGTQTLLQCAVDAG---------VGRVVHVSTNQVYGS----IDSGSW  139 (322)
T ss_dssp             TTCCEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHTT---------CCEEEEEEEGGGGCC----CSSSCB
T ss_pred             cccceEEeeccccccc--ccccchHHHhhhhHHHHHHHHHHHHHcC---------CceEEEeecceeecC----CCCCCC
Confidence            3789999999875432  2335567889999999999999885421         348999998776532    223345


Q ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHh-------------
Q 023054          155 NDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSF-------------  221 (288)
Q Consensus       155 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-------------  221 (288)
                      ++.....+...|+.+|.+.+.+++.++++.   +  +.+.++.|+.+-.+..........+.+....             
T Consensus       140 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~  214 (322)
T d1r6da_         140 TESSPLEPNSPYAASKAGSDLVARAYHRTY---G--LDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANV  214 (322)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCE
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeE
Confidence            566667778899999999999999998775   3  7788899988877654332233333322211             


Q ss_pred             hhcCChHHHHHHHHHHhcC
Q 023054          222 FLWKNVPQGAATTCYVALH  240 (288)
Q Consensus       222 ~~~~~~~~~a~~~~~l~~~  240 (288)
                      +-+...+|+|+++..++.+
T Consensus       215 r~~i~v~D~a~ai~~~~~~  233 (322)
T d1r6da_         215 REWVHTDDHCRGIALVLAG  233 (322)
T ss_dssp             EEEEEHHHHHHHHHHHHHH
T ss_pred             EccEEHHHHHHHHHHHHhC
Confidence            0123567999999999964

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=3.2e-14  Score=121.92  Aligned_cols=175  Identities=15%  Similarity=0.048  Sum_probs=120.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeC------C----hHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAAR------N----MAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNF   70 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r------~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   70 (288)
                      |||||+|.||.+++++|+++|++|+++++      +    ....+. ...+.    ..++.++.+|++|.+.+++++...
T Consensus         6 LITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           6 LVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRR-VQELT----GRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHH-HHHHH----TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             EEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHH-HHHhc----CCCcEEEEeecccccccccccccc
Confidence            69999999999999999999999999864      1    122222 22221    457999999999999998877653


Q ss_pred             HhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCcc
Q 023054           71 IALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIR  150 (288)
Q Consensus        71 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  150 (288)
                           .+++++|+|+.....  .+.++..+.+++|+.++..++.++...-         -.+++++||..........  
T Consensus        81 -----~~~~i~h~Aa~~~~~--~~~~~p~~~~~~Nv~gt~~l~~~~~~~~---------v~~~i~~ss~~~~~~~~~~--  142 (346)
T d1ek6a_          81 -----SFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMKAHG---------VKNLVFSSSATVYGNPQYL--  142 (346)
T ss_dssp             -----CEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEEEEGGGGCSCSSS--
T ss_pred             -----ccccccccccccCcH--hhHhCHHHHHHhhhcccccccchhhhcC---------cccccccccceeeeccccc--
Confidence                 789999999976432  2234457789999999999888874321         2478888887655432111  


Q ss_pred             ccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccC
Q 023054          151 FQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMT  203 (288)
Q Consensus       151 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t  203 (288)
                       ..........+...|+.+|...+...+.+++...  +  +....+.|+.+-+
T Consensus       143 -~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~--~--~~~~~lR~~~v~G  190 (346)
T d1ek6a_         143 -PLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADK--T--WNAVLLRYFNPTG  190 (346)
T ss_dssp             -SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCT--T--CEEEEEEECEEEC
T ss_pred             -cccccccccccCChHHHHHHHHHHHHHHHHHhcc--C--CceEEEeecceec
Confidence             1111222233456799999999988877665422  3  5566666655544

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=4e-15  Score=126.03  Aligned_cols=207  Identities=12%  Similarity=0.044  Sum_probs=133.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||++++++|.++|++|+++++......+.   +.......++.....|+.+.            ...++|+|
T Consensus         5 lVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~------------~~~~~d~V   69 (312)
T d2b69a1           5 LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEHWIGHENFELINHDVVEP------------LYIEVDQI   69 (312)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGGGTTCTTEEEEECCTTSC------------CCCCCSEE
T ss_pred             EEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHH---HHHhcCCCceEEEehHHHHH------------HHcCCCEE
Confidence            6999999999999999999999999998632111111   11111123455555555321            23479999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccccccc-CCccccCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYK-GGIRFQKINDRAG  159 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~-~~~~~~~~~~~~~  159 (288)
                      ||+|+......  ..++..+.+++|+.++..+++++..    .      +.++|++||.+.+.... .......+.+...
T Consensus        70 ihlAa~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~~~~----~------~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~  137 (312)
T d2b69a1          70 YHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKR----V------GARLLLASTSEVYGDPEVHPQSEDYWGHVNP  137 (312)
T ss_dssp             EECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHH----H------TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCS
T ss_pred             EECcccCCchh--HHhCHHHHHHHHHHHHHHHHHHHHH----c------CCcEEEEEChheecCCCCCCCCccccCCCCC
Confidence            99999754321  2345678899999999999987643    2      24899999866543211 1112222333344


Q ss_pred             CCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCC--hHHHHHHHHHHh-------------hhc
Q 023054          160 YSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHS--AVVMRFLKFFSF-------------FLW  224 (288)
Q Consensus       160 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~-------------~~~  224 (288)
                      ..+...|+.||.+.+.+++.++++.   +  +.+..+.|+.+-.|.....  .....+......             +-+
T Consensus       138 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~  212 (312)
T d2b69a1         138 IGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAF  212 (312)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEEC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHh---C--CcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEcc
Confidence            5567889999999999999988876   4  7788899988877643321  122233222211             112


Q ss_pred             CChHHHHHHHHHHhc
Q 023054          225 KNVPQGAATTCYVAL  239 (288)
Q Consensus       225 ~~~~~~a~~~~~l~~  239 (288)
                      ...+|++++++.++.
T Consensus       213 i~v~D~~~~~~~~~~  227 (312)
T d2b69a1         213 QYVSDLVNGLVALMN  227 (312)
T ss_dssp             EEHHHHHHHHHHHHT
T ss_pred             EEHHHHHHHHHHHHh
Confidence            246799999988885

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.56  E-value=1.7e-14  Score=124.03  Aligned_cols=182  Identities=14%  Similarity=0.078  Sum_probs=130.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||.++++.|.++|++|++++|+........+....   ...+.++.+|++|.+.+.++++..     .+|++
T Consensus        12 LVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~~~l~~~~~~~-----~~~~v   83 (356)
T d1rkxa_          12 FVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREF-----QPEIV   83 (356)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccChHhhhhhhhhc-----hhhhh
Confidence            6999999999999999999999999999987654433332211   346999999999999998888765     78999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      +|+|+.....  .+.+.....+.+|+.++..++.++...-.        ...+++.||......   .......++....
T Consensus        84 ~~~aa~~~~~--~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~--------~~~~~~~s~~~~~~~---~~~~~~~~~~~~~  150 (356)
T d1rkxa_          84 FHMAAQPLVR--LSYSEPVETYSTNVMGTVYLLEAIRHVGG--------VKAVVNITSDKCYDN---KEWIWGYRENEAM  150 (356)
T ss_dssp             EECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHHCC--------CCEEEEECCGGGBCC---CCSSSCBCTTSCB
T ss_pred             hhhhcccccc--ccccCCccccccccccchhhhhhhhcccc--------ccccccccccccccc---ccccccccccccc
Confidence            9999865432  22355678999999999999888865321        224444444433321   1112233334445


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcc------cCCceEEEEeeCCcccCCC
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQE------EGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~------~~~~i~v~~v~PG~v~t~~  205 (288)
                      .+...|+.+|.+.+.+.+.++.++..      .+  +.+..+.|+.+..+-
T Consensus       151 ~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         151 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGG  199 (356)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTT
T ss_pred             CCCCccccccccchhhhhHHhhhcccchhccccC--ceEEeccCCCeeCCC
Confidence            56778999999999999988887653      24  778888888776543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.52  E-value=1.5e-14  Score=124.92  Aligned_cols=175  Identities=17%  Similarity=0.055  Sum_probs=124.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||++++++|.++|++|+++++......      ...  .....+..+|+.+.+.+..+++       ++|.|
T Consensus        19 LVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~V   83 (363)
T d2c5aa1          19 SITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TED--MFCDEFHLVDLRVMENCLKVTE-------GVDHV   83 (363)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGG--GTCSEEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             EEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhh--cccCcEEEeechhHHHHHHHhh-------cCCeE
Confidence            69999999999999999999999999987543210      000  1335677889998877766553       68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccc-c--CCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRF-Q--KINDR  157 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~-~--~~~~~  157 (288)
                      ||+|+...... ...+.....+.+|+.++..++.++...-         -.++|++||...+......... .  ...+.
T Consensus        84 ih~a~~~~~~~-~~~~~~~~~~~~n~~gt~~ll~~~~~~~---------vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~  153 (363)
T d2c5aa1          84 FNLAADMGGMG-FIQSNHSVIMYNNTMISFNMIEAARING---------IKRFFYASSACIYPEFKQLETTNVSLKESDA  153 (363)
T ss_dssp             EECCCCCCCHH-HHTTCHHHHHHHHHHHHHHHHHHHHHTT---------CSEEEEEEEGGGSCGGGSSSSSSCEECGGGG
T ss_pred             eeccccccccc-ccccccccccccccchhhHHHHhHHhhC---------ccccccccccccccccccccccccccccccC
Confidence            99998764421 2345678889999999999888876532         2489999998765432221110 0  11222


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                      ....+...|+.+|.+.+.+++.+.+++   +  +++..+.|+.+-.+.
T Consensus       154 ~~~~p~~~Yg~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         154 WPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPF  196 (363)
T ss_dssp             SSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTT
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeeeEeccC
Confidence            334456789999999999998888776   3  778888888886653

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.52  E-value=2.6e-14  Score=124.31  Aligned_cols=185  Identities=16%  Similarity=0.117  Sum_probs=127.3

Q ss_pred             CcccCCChhHHHHHHHHHH-CCCEEEEEeC---------ChHHHHHHHHHHHhh------CCCCceEEEEecCCChHHHH
Q 023054            1 MLAGGASGIGLETARVLAL-RKAHVIIAAR---------NMAAANEARQLILKE------DDTARVDTLKLDLSSIASIK   64 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~-~G~~V~~~~r---------~~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~~~~~~~   64 (288)
                      |||||+|.||++++++|++ .|++|+++++         ..+..+.....+...      ....++.++.+|++|.+.++
T Consensus         6 LITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~   85 (383)
T d1gy8a_           6 LVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLN   85 (383)
T ss_dssp             EEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHH
T ss_pred             EEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHhh
Confidence            6999999999999999986 6899999873         111222222222221      12345889999999999888


Q ss_pred             HHHHHHHhcCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccccc
Q 023054           65 DFAQNFIALNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYT  144 (288)
Q Consensus        65 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~  144 (288)
                      ++++..    .++|+|+|+|+......  ..+.....+.+|+.++..++.++....         ..++++++|......
T Consensus        86 ~~~~~~----~~~d~ViH~Aa~~~~~~--~~~~~~~~~~~N~~~t~~~l~~~~~~~---------~~~~~~~~s~~~~~~  150 (383)
T d1gy8a_          86 GVFTRH----GPIDAVVHMCAFLAVGE--SVRDPLKYYDNNVVGILRLLQAMLLHK---------CDKIIFSSSAAIFGN  150 (383)
T ss_dssp             HHHHHS----CCCCEEEECCCCCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEEEEGGGTBS
T ss_pred             hhhhcc----ceeehhhcccccccccc--cccccccccccccccccccchhhhccC---------Ccccccccccccccc
Confidence            887643    47899999999764321  224456788999999999988876432         346777776655433


Q ss_pred             ccCC---ccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCC
Q 023054          145 YKGG---IRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNL  205 (288)
Q Consensus       145 ~~~~---~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~  205 (288)
                      ....   ....++.+.....+...|+.+|.+.+.+++.+...++     +.+.++.|+.+-.+.
T Consensus       151 ~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g-----l~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG-----IKGICLRYFNACGAH  209 (383)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECEEECCC
T ss_pred             cccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhC-----CCEEEEecceeeccC
Confidence            2111   1122344555666788899999999999988877654     667777777765443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.47  E-value=2.8e-13  Score=109.44  Aligned_cols=207  Identities=11%  Similarity=-0.022  Sum_probs=125.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAH--VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||+|+||+++++.|+++|+.  |+.+.|+++.....         ..+++++.+|+++.++..++++       ++|
T Consensus         7 lVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~-------~~d   70 (252)
T d2q46a1           7 LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ-------GID   70 (252)
T ss_dssp             EEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT-------TCS
T ss_pred             EEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccccccccccc-------cce
Confidence            69999999999999999999964  66677887654321         3468899999999998887764       689


Q ss_pred             eEEEccccCCCCC-----------CCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccC
Q 023054           79 ILINNAGIMFCPY-----------QISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKG  147 (288)
Q Consensus        79 ~lv~~ag~~~~~~-----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  147 (288)
                      .+||+++......           ......+.....+|+.++..++.......         .+.....++.....+...
T Consensus        71 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~s~~~~~~~~~~  141 (252)
T d2q46a1          71 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG---------VKHIVVVGSMGGTNPDHP  141 (252)
T ss_dssp             EEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT---------CSEEEEEEETTTTCTTCG
T ss_pred             eeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc---------ccccccccccccCCCCcc
Confidence            9999998754211           12224456677888888887776554433         456777766554332000


Q ss_pred             CccccCCCCCCCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHH--HHHHhhhcC
Q 023054          148 GIRFQKINDRAGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFL--KFFSFFLWK  225 (288)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~  225 (288)
                                ........|...+..    ...+.   ...+  +++..+.||.+..+............  -......+.
T Consensus       142 ----------~~~~~~~~~~~~~~~----~~~~~---~~~~--~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i  202 (252)
T d2q46a1         142 ----------LNKLGNGNILVWKRK----AEQYL---ADSG--TPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTV  202 (252)
T ss_dssp             ----------GGGGGGCCHHHHHHH----HHHHH---HHSS--SCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEE
T ss_pred             ----------cccccccchhhhhhh----hhhhh---hccc--ccceeecceEEECCCcchhhhhhccCcccccCCCCeE
Confidence                      001111223333322    22222   2345  78888999998666432221000000  000112245


Q ss_pred             ChHHHHHHHHHHhcCCCccCCCceeeccC
Q 023054          226 NVPQGAATTCYVALHPNLKGVTGKYFLDC  254 (288)
Q Consensus       226 ~~~~~a~~~~~l~~~~~~~~~tG~~~~~~  254 (288)
                      +.+|+|++++.++.++.   ..|+.|+.+
T Consensus       203 ~~~Dva~a~~~~l~~~~---~~g~~~~i~  228 (252)
T d2q46a1         203 PRADVAEVCIQALLFEE---AKNKAFDLG  228 (252)
T ss_dssp             EHHHHHHHHHHHTTCGG---GTTEEEEEE
T ss_pred             EHHHHHHHHHHHhCCcc---ccCcEEEEe
Confidence            78999999999996443   247666543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=7.1e-14  Score=113.14  Aligned_cols=186  Identities=13%  Similarity=0.045  Sum_probs=122.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||||.||++++++|.++|.  +|++++|++.....      ..  ..++....+|+.+.+++...       ..++|
T Consensus        18 lItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~--~~~i~~~~~D~~~~~~~~~~-------~~~~d   82 (232)
T d2bkaa1          18 FILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EA--YKNVNQEVVDFEKLDDYASA-------FQGHD   82 (232)
T ss_dssp             EEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GG--GGGCEEEECCGGGGGGGGGG-------GSSCS
T ss_pred             EEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cc--cceeeeeeeccccccccccc-------ccccc
Confidence            6999999999999999999996  89999997643221      00  23567777888876554333       34789


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      +++|++|....     .........+|+.++..+++.+..    .+     -.++|++||.....               
T Consensus        83 ~vi~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~----~~-----v~~fi~~Ss~~~~~---------------  133 (232)
T d2bkaa1          83 VGFCCLGTTRG-----KAGAEGFVRVDRDYVLKSAELAKA----GG-----CKHFNLLSSKGADK---------------  133 (232)
T ss_dssp             EEEECCCCCHH-----HHHHHHHHHHHTHHHHHHHHHHHH----TT-----CCEEEEECCTTCCT---------------
T ss_pred             ccccccccccc-----ccchhhhhhhcccccceeeecccc----cC-----ccccccCCcccccc---------------
Confidence            99999986421     123456678898888888877643    22     34799999977542               


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHH-H-------hhhcCChHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFF-S-------FFLWKNVPQG  230 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~  230 (288)
                        .+...|+.+|...+...+.    ++..    ++..+.||.+..+..... ....+...+ +       .....+.+|+
T Consensus       134 --~~~~~Y~~~K~~~E~~l~~----~~~~----~~~IlRP~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~I~~~dv  202 (232)
T d2bkaa1         134 --SSNFLYLQVKGEVEAKVEE----LKFD----RYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASGHSVPVVTV  202 (232)
T ss_dssp             --TCSSHHHHHHHHHHHHHHT----TCCS----EEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGGTEEEHHHH
T ss_pred             --CccchhHHHHHHhhhcccc----cccc----ceEEecCceeecCCCcCc-HHHHHHHHHhhccCCcccCCCeEEHHHH
Confidence              2345699999887654432    2211    366689999987754432 122222221 1       1122356899


Q ss_pred             HHHHHHHhcCC
Q 023054          231 AATTCYVALHP  241 (288)
Q Consensus       231 a~~~~~l~~~~  241 (288)
                      |++++.++..+
T Consensus       203 A~a~i~~~~~~  213 (232)
T d2bkaa1         203 VRAMLNNVVRP  213 (232)
T ss_dssp             HHHHHHHHTSC
T ss_pred             HHHHHHHHhcC
Confidence            99999998643

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.31  E-value=3.6e-11  Score=99.19  Aligned_cols=184  Identities=17%  Similarity=0.149  Sum_probs=120.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||||.||.+++++|.++|++|+.++|++                       +|++|.++++++++..     ++|+|
T Consensus         5 lItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~d~v   56 (281)
T d1vl0a_           5 LITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KPNVV   56 (281)
T ss_dssp             EEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CCCEE
Confidence            6999999999999999999999999998753                       4899999999888765     78999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+|+.....  ......+..+..|+.....+.......          ...+++.||......    ....+..+....
T Consensus        57 ih~a~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~----------~~~~~~~ss~~v~~~----~~~~~~~e~~~~  120 (281)
T d1vl0a_          57 INCAAHTAVD--KCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYVFDG----EAKEPITEFDEV  120 (281)
T ss_dssp             EECCCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCS----CCSSCBCTTSCC
T ss_pred             Eeeccccccc--cccccchhhcccccccccccccccccc----------cccccccccceeeec----cccccccccccc
Confidence            9999865431  122334556667776666655544332          235666665543321    112223344445


Q ss_pred             CccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCChHHHHHHHHHHhh-----------hcCChHH
Q 023054          161 SDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFF-----------LWKNVPQ  229 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  229 (288)
                      .+...|+.+|...+.+.+.       .+  .+...+.|+.+..+-..   +...+.......           .+...+|
T Consensus       121 ~~~~~~~~~k~~~e~~~~~-------~~--~~~~i~R~~~vyG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  188 (281)
T d1vl0a_         121 NPQSAYGKTKLEGENFVKA-------LN--PKYYIVRTAWLYGDGNN---FVKTMINLGKTHDELKVVHDQVGTPTSTVD  188 (281)
T ss_dssp             CCCSHHHHHHHHHHHHHHH-------HC--SSEEEEEECSEESSSSC---HHHHHHHHHHHCSEEEEESSCEECCEEHHH
T ss_pred             cchhhhhhhhhHHHHHHHH-------hC--CCccccceeEEeCCCcc---cccchhhhhccCCceeecCCceeccchhhh
Confidence            6777899999886665432       23  44666899998766432   222222222111           2346779


Q ss_pred             HHHHHHHHhcC
Q 023054          230 GAATTCYVALH  240 (288)
Q Consensus       230 ~a~~~~~l~~~  240 (288)
                      +++.+.+++.+
T Consensus       189 ~~~~~~~~~~~  199 (281)
T d1vl0a_         189 LARVVLKVIDE  199 (281)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhhhhhhhhhh
Confidence            99999999863

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.25  E-value=6.4e-12  Score=104.53  Aligned_cols=137  Identities=17%  Similarity=0.120  Sum_probs=97.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |||||+|.||+++++.|.++|..|+ ++++...                   +.+|++|.+.++++++..     ++|+|
T Consensus         4 LItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~-----~~D~V   58 (298)
T d1n2sa_           4 LLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE-------------------FCGDFSNPKGVAETVRKL-----RPDVI   58 (298)
T ss_dssp             EEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS-------------------SCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc-------------------ccCcCCCHHHHHHHHHHc-----CCCEE
Confidence            6999999999999999999886544 4443210                   246999999999988765     68999


Q ss_pred             EEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCCCC
Q 023054           81 INNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGY  160 (288)
Q Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  160 (288)
                      ||+||.....  ...+.....+.+|+.++..+..++..    .      +.+++++||...+.. .   ...++.+....
T Consensus        59 ih~Aa~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~------~~~~~~~ss~~~~~~-~---~~~~~~E~~~~  122 (298)
T d1n2sa_          59 VNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANE----T------GAWVVHYSTDYVFPG-T---GDIPWQETDAT  122 (298)
T ss_dssp             EECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTT----T------TCEEEEEEEGGGSCC-C---TTCCBCTTSCC
T ss_pred             EEeccccccc--ccccCccccccccccccccchhhhhc----c------ccccccccccccccC-C---CCCCCcccccc
Confidence            9999976432  23345577889999999888877632    1      357777777654432 1   12234455556


Q ss_pred             CccccchhhHHHHHHHHH
Q 023054          161 SDKKAYGQSKLANILHAN  178 (288)
Q Consensus       161 ~~~~~Y~~sK~a~~~~~~  178 (288)
                      .+...|+.+|.+.+.+.+
T Consensus       123 ~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_         123 SPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             CCSSHHHHHHHHHHHHHH
T ss_pred             CCCchHhhhhhhhhhhHH
Confidence            677889999988766543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.15  E-value=2.5e-11  Score=101.50  Aligned_cols=76  Identities=11%  Similarity=0.097  Sum_probs=58.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHH----HHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAA----NEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |||||||.||++++++|.++|++|+++.|+....    .+....+.    ...+.++.+|++|.+++.+.+.       +
T Consensus         7 LVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~----~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           7 LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK----QLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             EEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH----TTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             EEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc----cCCcEEEEeecccchhhhhhcc-------C
Confidence            6999999999999999999999999999965321    11112221    3568899999999888877664       6


Q ss_pred             cceEEEccccC
Q 023054           77 LNILINNAGIM   87 (288)
Q Consensus        77 id~lv~~ag~~   87 (288)
                      .+.++++++..
T Consensus        76 ~~~~~~~~~~~   86 (312)
T d1qyda_          76 VDVVISALAGG   86 (312)
T ss_dssp             CSEEEECCCCS
T ss_pred             cchhhhhhhhc
Confidence            78888888754

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.14  E-value=4e-11  Score=95.08  Aligned_cols=181  Identities=15%  Similarity=0.120  Sum_probs=111.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||||.||++++++|.++|+  +|+...|++..          .  ..+   +..+..|..++      .....+.+|
T Consensus         6 lItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~--~~~---~~~~~~d~~~~------~~~~~~~~d   64 (212)
T d2a35a1           6 LLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPR---LDNPVGPLAEL------LPQLDGSID   64 (212)
T ss_dssp             EEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTT---EECCBSCHHHH------GGGCCSCCS
T ss_pred             EEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------h--ccc---ccccccchhhh------hhccccchh
Confidence            6999999999999999999998  67777765311          0  122   33445554332      122345799


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCCC
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRA  158 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~~  158 (288)
                      .+|+++|.....    .........+|+.++..+++++..    ..     -.+++++||..+.                
T Consensus        65 ~vi~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~----~~-----v~~~i~~Ss~~~~----------------  115 (212)
T d2a35a1          65 TAFCCLGTTIKE----AGSEEAFRAVDFDLPLAVGKRALE----MG-----ARHYLVVSALGAD----------------  115 (212)
T ss_dssp             EEEECCCCCHHH----HSSHHHHHHHHTHHHHHHHHHHHH----TT-----CCEEEEECCTTCC----------------
T ss_pred             eeeeeeeeeccc----cccccccccchhhhhhhccccccc----cc-----ccccccccccccc----------------
Confidence            999999865321    122356788899998888876532    22     3589999987654                


Q ss_pred             CCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCCCCCCCh--HH-HHHHHHH-HhhhcCChHHHHHHH
Q 023054          159 GYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTNLFKHSA--VV-MRFLKFF-SFFLWKNVPQGAATT  234 (288)
Q Consensus       159 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~~~~~~~--~~-~~~~~~~-~~~~~~~~~~~a~~~  234 (288)
                       ......|..+|...+.+.+       ..+. -++..+.|+.+..+......  .. ......+ ........+|+|+++
T Consensus       116 -~~~~~~y~~~K~~~E~~l~-------~~~~-~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai  186 (212)
T d2a35a1         116 -AKSSIFYNRVKGELEQALQ-------EQGW-PQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARAL  186 (212)
T ss_dssp             -TTCSSHHHHHHHHHHHHHT-------TSCC-SEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHH
T ss_pred             -cccccchhHHHHHHhhhcc-------cccc-ccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHH
Confidence             2344679999987665433       2220 14667889998665432110  00 0000000 111124678999999


Q ss_pred             HHHhcC
Q 023054          235 CYVALH  240 (288)
Q Consensus       235 ~~l~~~  240 (288)
                      ++++.+
T Consensus       187 ~~~~~~  192 (212)
T d2a35a1         187 WRLALE  192 (212)
T ss_dssp             HHHHTC
T ss_pred             HHHHcC
Confidence            999963

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.97  E-value=1.1e-09  Score=90.97  Aligned_cols=168  Identities=15%  Similarity=0.050  Sum_probs=99.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh--cCCCc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA--LNLPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--~~~~i   77 (288)
                      |||||+|.||+++++.|+++|+ .|+++++-... .+..... .    .    ..+|..+..   .+.+....  ....+
T Consensus         3 LITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~~~~-~----~----~~~~~~~~~---~~~~~~~~~~~~~~~   69 (307)
T d1eq2a_           3 IVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFVNLV-D----L----NIADYMDKE---DFLIQIMAGEEFGDV   69 (307)
T ss_dssp             EEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGHHHH-T----S----CCSEEEEHH---HHHHHHHTTCCCSSC
T ss_pred             EEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhhccc-c----c----chhhhccch---HHHHHHhhhhcccch
Confidence            6999999999999999999997 57777532111 1111111 1    1    112222322   22333332  34578


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccccccccCCccccCCCCC
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDR  157 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~~~~~~~~  157 (288)
                      ++++|.|+....    .....+.....|+.++..++.++...          .-++++.||......+...    ..+..
T Consensus        70 ~~i~~~aa~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~----------~i~~v~~ss~~~~~~~~~~----~~~~~  131 (307)
T d1eq2a_          70 EAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAATYGGRTSD----FIESR  131 (307)
T ss_dssp             CEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----------TCCEEEEEEGGGGTTCCSC----BCSSG
T ss_pred             hhhhhhcccccc----cccccccccccccccccccccccccc----------ccccccccccccccccccc----ccccc
Confidence            889999875432    22345667777888887777665432          2356666666555432211    12223


Q ss_pred             CCCCccccchhhHHHHHHHHHHHHHHhcccCCceEEEEeeCCcccCC
Q 023054          158 AGYSDKKAYGQSKLANILHANELSRRFQEEGVNITANSVHPGLIMTN  204 (288)
Q Consensus       158 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~i~v~~v~PG~v~t~  204 (288)
                      ....+...|+.+|.+.+.+++.+..+.+     +.+..+.|..+-.+
T Consensus       132 ~~~~~~~~Y~~~K~~~e~~~~~~~~~~~-----~~~~~~r~~~vyGp  173 (307)
T d1eq2a_         132 EYEKPLNVYGYSKFLFDEYVRQILPEAN-----SQIVGFRYFNVYGP  173 (307)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHHHHGGGCS-----SCEEEEEECEEESS
T ss_pred             cccccccccccccchhhhhccccccccc-----cccccccceeEeec
Confidence            3345667899999999998888776654     44555566555444

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.97  E-value=2.9e-13  Score=106.40  Aligned_cols=44  Identities=20%  Similarity=0.243  Sum_probs=40.8

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED   45 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~   45 (288)
                      |+||+|+||+++|+.|+++|++|++++|++++++++.+++....
T Consensus         5 vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           5 LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            67888999999999999999999999999999999999887654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.68  E-value=2.2e-07  Score=76.23  Aligned_cols=78  Identities=17%  Similarity=0.238  Sum_probs=57.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHH--HHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANE--ARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |||||||.||+++++.|.++|++|++++|+......  ....+.... ...+.++.+|+.+.....+.++       ..+
T Consensus         7 LVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~~   78 (307)
T d1qyca_           7 LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK-------NVD   78 (307)
T ss_dssp             EEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH-------TCS
T ss_pred             EEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhh-------hce
Confidence            699999999999999999999999999986533211  111111111 3458889999999988777665       578


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      .++|+++.
T Consensus        79 ~vi~~~~~   86 (307)
T d1qyca_          79 VVISTVGS   86 (307)
T ss_dssp             EEEECCCG
T ss_pred             eeeecccc
Confidence            89998864

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.67  E-value=1.6e-07  Score=79.50  Aligned_cols=73  Identities=14%  Similarity=0.107  Sum_probs=53.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHH-HHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASI-KDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~-~~~~~~~~~~~~~id~   79 (288)
                      +||||||.||.+++++|.++|++|+++.|+..+...  ..+..   ...+.++++|+.|..+. +.++       ...|.
T Consensus         7 lVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~~~~~~a~-------~~~~~   74 (350)
T d1xgka_           7 AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNVPLMDTLF-------EGAHL   74 (350)
T ss_dssp             EEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCHHHHHHHH-------TTCSE
T ss_pred             EEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcHHHHHHHh-------cCCce
Confidence            699999999999999999999999999998655332  22221   24689999999986543 3332       35677


Q ss_pred             EEEccc
Q 023054           80 LINNAG   85 (288)
Q Consensus        80 lv~~ag   85 (288)
                      ++++..
T Consensus        75 ~~~~~~   80 (350)
T d1xgka_          75 AFINTT   80 (350)
T ss_dssp             EEECCC
T ss_pred             EEeecc
Confidence            776643

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=0.00011  Score=55.68  Aligned_cols=78  Identities=15%  Similarity=0.156  Sum_probs=55.2

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |.| +||.|++++..|++.|. ++++++|+.+..+++...+.+............|+.+.+.+.....       ..|++
T Consensus        23 IlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~dii   94 (182)
T d1vi2a1          23 LLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-------SADIL   94 (182)
T ss_dssp             EEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-------TCSEE
T ss_pred             EEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-------cccee
Confidence            444 48999999999999998 7999999877666554433221112234566789998877765543       67999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      ||+....
T Consensus        95 IN~Tp~G  101 (182)
T d1vi2a1          95 TNGTKVG  101 (182)
T ss_dssp             EECSSTT
T ss_pred             ccccCCc
Confidence            9998653

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=0.00016  Score=54.19  Aligned_cols=74  Identities=12%  Similarity=0.208  Sum_probs=50.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|++|...++..-..|++|+++++++++.+.+. ++     +.. .+  +|.++.+-.+++.+...  ..++|++
T Consensus        33 lV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~-----Ga~-~v--i~~~~~~~~~~i~~~t~--~~g~d~v  101 (174)
T d1yb5a2          33 LVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QN-----GAH-EV--FNHREVNYIDKIKKYVG--EKGIDII  101 (174)
T ss_dssp             EEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCS-EE--EETTSTTHHHHHHHHHC--TTCEEEE
T ss_pred             EEEeccccccccccccccccCccccccccccccccccc-cc-----Ccc-cc--cccccccHHHHhhhhhc--cCCceEE
Confidence            58999999999988888889999999999877655432 22     222 22  47777654444433321  2359999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       102 ~d~~g  106 (174)
T d1yb5a2         102 IEMLA  106 (174)
T ss_dssp             EESCH
T ss_pred             eeccc
Confidence            98876

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.52  E-value=0.00017  Score=54.46  Aligned_cols=74  Identities=14%  Similarity=0.196  Sum_probs=51.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+||+|.+.++.....|++|+.+.+++++.+...+    .  +....   +|..+.+..+.+.+..  ...++|++
T Consensus        34 lV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~--Ga~~v---i~~~~~~~~~~~~~~~--~~~Gvd~v  102 (182)
T d1v3va2          34 LVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----I--GFDAA---FNYKTVNSLEEALKKA--SPDGYDCY  102 (182)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T--TCSEE---EETTSCSCHHHHHHHH--CTTCEEEE
T ss_pred             EEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----h--hhhhh---cccccccHHHHHHHHh--hcCCCcee
Confidence            689999999999888888899999999999877554333    1  22222   3555555444444332  23479999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       103 ~D~vG  107 (182)
T d1v3va2         103 FDNVG  107 (182)
T ss_dssp             EESSC
T ss_pred             EEecC
Confidence            99987

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.51  E-value=0.00016  Score=54.00  Aligned_cols=70  Identities=17%  Similarity=0.227  Sum_probs=48.9

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||.|| |.+|+.+|+.|+++|++|++++|+.++++++.+.+      ........+..+.......+.       ..|.+
T Consensus         6 liiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~------~~~~~~~~~~~~~~~~~~~i~-------~~~~~   71 (182)
T d1e5qa1           6 LMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDDAALDAEVA-------KHDLV   71 (182)
T ss_dssp             EEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC------TTEEEEECCTTCHHHHHHHHT-------TSSEE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc------cccccccccccchhhhHhhhh-------cccee
Confidence            35665 99999999999999999999999999888766532      234444456655555544432       34566


Q ss_pred             EEcc
Q 023054           81 INNA   84 (288)
Q Consensus        81 v~~a   84 (288)
                      +...
T Consensus        72 i~~~   75 (182)
T d1e5qa1          72 ISLI   75 (182)
T ss_dssp             EECS
T ss_pred             Eeec
Confidence            5443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.42  E-value=0.00016  Score=51.56  Aligned_cols=69  Identities=14%  Similarity=0.203  Sum_probs=53.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|+ |.+|+.+++.|.++|+.|++++++++..++..++       ....++..|.+|.+.++++-      ....|.+
T Consensus         4 vI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~-------~~~~vi~Gd~~~~~~l~~~~------i~~a~~v   69 (132)
T d1lssa_           4 IIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------IDALVINGDCTKIKTLEDAG------IEDADMY   69 (132)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------CSSEEEESCTTSHHHHHHTT------TTTCSEE
T ss_pred             EEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh-------hhhhhccCcccchhhhhhcC------hhhhhhh
Confidence            35665 9999999999999999999999999887765443       13678889999988666541      1356777


Q ss_pred             EEc
Q 023054           81 INN   83 (288)
Q Consensus        81 v~~   83 (288)
                      +..
T Consensus        70 v~~   72 (132)
T d1lssa_          70 IAV   72 (132)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            754

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.34  E-value=0.0008  Score=48.55  Aligned_cols=115  Identities=17%  Similarity=0.098  Sum_probs=67.7

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      |+||+|.+|.++|..|+.+|.  ++++++.++.+.+.  ..+...   ........-+ ...+..+.+       ...|+
T Consensus         5 IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~---~~~~~~~~~~-~~~~~~~~~-------~~aDi   71 (144)
T d1mlda1           5 VLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHI---ETRATVKGYL-GPEQLPDCL-------KGCDV   71 (144)
T ss_dssp             EETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTS---SSSCEEEEEE-SGGGHHHHH-------TTCSE
T ss_pred             EECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhh---hhhcCCCeEE-cCCChHHHh-------CCCCE
Confidence            789999999999999999886  69999998755432  223221   1111111112 222222222       26899


Q ss_pred             EEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc
Q 023054           80 LINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH  141 (288)
Q Consensus        80 lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  141 (288)
                      +|..||.....    .+.-.+.+..|..-.-.+.+.+    .+..    +++.|+++|-+.-
T Consensus        72 vVitag~~~~~----g~sR~~ll~~N~~i~~~i~~~i----~~~~----p~~iiivvtNPvD  121 (144)
T d1mlda1          72 VVIPAGVPRKP----GMTRDDLFNTNATIVATLTAAC----AQHC----PDAMICIISNPVN  121 (144)
T ss_dssp             EEECCSCCCCT----TCCGGGGHHHHHHHHHHHHHHH----HHHC----TTSEEEECSSCHH
T ss_pred             EEECCCcCCCC----CCCcchHHHHHHHHHHHHHHHH----HhcC----CCeEEEEecCchh
Confidence            99999975332    2234556666665554444444    4322    1467787777653

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.00034  Score=52.43  Aligned_cols=75  Identities=13%  Similarity=0.181  Sum_probs=53.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|++|...++.....|++|+++++++++.+...+ +     +.. +  .+|.++++..+++.+ +- ....+|++
T Consensus        33 lv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l-----Ga~-~--vi~~~~~d~~~~v~~-~t-~g~g~d~v  101 (179)
T d1qora2          33 LFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAW-Q--VINYREEDLVERLKE-IT-GGKKVRVV  101 (179)
T ss_dssp             EESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCS-E--EEETTTSCHHHHHHH-HT-TTCCEEEE
T ss_pred             EEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c-----CCe-E--EEECCCCCHHHHHHH-Hh-CCCCeEEE
Confidence            589999999999888888899999999999988765443 2     332 2  247777655554432 21 23469999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      +.+.|.
T Consensus       102 ~d~~g~  107 (179)
T d1qora2         102 YDSVGR  107 (179)
T ss_dssp             EECSCG
T ss_pred             EeCccH
Confidence            988873

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.31  E-value=0.00029  Score=53.04  Aligned_cols=74  Identities=11%  Similarity=0.158  Sum_probs=50.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|++|...++.+...|++|+++.+++++.+.+    ++.  +.. ++  .|..+.+-.+++.+..  ...++|++
T Consensus        30 lI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~--Ga~-~v--i~~~~~~~~~~v~~~t--~~~g~d~v   98 (183)
T d1pqwa_          30 LIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRL--GVE-YV--GDSRSVDFADEILELT--DGYGVDVV   98 (183)
T ss_dssp             EETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTT--CCS-EE--EETTCSTHHHHHHHHT--TTCCEEEE
T ss_pred             EEECCCCCcccccchhhccccccceeeeccccccccc----ccc--ccc-cc--ccCCccCHHHHHHHHh--CCCCEEEE
Confidence            5899999999998888888899999999988765432    222  332 22  3556654444433221  12369999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus        99 ~d~~g  103 (183)
T d1pqwa_          99 LNSLA  103 (183)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99887

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.31  E-value=0.00025  Score=53.89  Aligned_cols=81  Identities=16%  Similarity=0.180  Sum_probs=51.1

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh-cCCCcceE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA-LNLPLNIL   80 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~~id~l   80 (288)
                      ++||+|++|.+.++..-..|++|+.+.|+.+..++..+.+.+.+  ... ++.-|-.+...+...+.++.. ..+++|++
T Consensus        35 ~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lG--ad~-vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv  111 (189)
T d1gu7a2          35 QNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG--ATQ-VITEDQNNSREFGPTIKEWIKQSGGEAKLA  111 (189)
T ss_dssp             ESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT--CSE-EEEHHHHHCGGGHHHHHHHHHHHTCCEEEE
T ss_pred             EeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcc--ccE-EEeccccchhHHHHHHHHHHhhccCCceEE
Confidence            37999999999777666789999999888777666666655542  322 222221122223333333332 34579999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus       112 ~D~vg  116 (189)
T d1gu7a2         112 LNCVG  116 (189)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            98876

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.22  E-value=0.00065  Score=49.96  Aligned_cols=68  Identities=16%  Similarity=0.289  Sum_probs=50.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||.|+ |++|..+++.|..+|+ +|.++.|+.++++++..++     +.  .++     +.+++.+.+.       ..|+
T Consensus        28 lviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~--~~~-----~~~~~~~~l~-------~~Di   87 (159)
T d1gpja2          28 LVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GG--EAV-----RFDELVDHLA-------RSDV   87 (159)
T ss_dssp             EEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TC--EEC-----CGGGHHHHHH-------TCSE
T ss_pred             EEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hc--ccc-----cchhHHHHhc-------cCCE
Confidence            46787 9999999999999998 6999999999988877765     22  222     2333333333       5799


Q ss_pred             EEEccccCC
Q 023054           80 LINNAGIMF   88 (288)
Q Consensus        80 lv~~ag~~~   88 (288)
                      ||++.+...
T Consensus        88 vi~atss~~   96 (159)
T d1gpja2          88 VVSATAAPH   96 (159)
T ss_dssp             EEECCSSSS
T ss_pred             EEEecCCCC
Confidence            999988543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.18  E-value=0.0013  Score=48.60  Aligned_cols=77  Identities=22%  Similarity=0.208  Sum_probs=51.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC-CCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN-LPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id~   79 (288)
                      +|+| +|+||...++.+...|++|+++++++++++.+.+ +     +.... +..|-.+ ++.....+.+.+.. ..+|+
T Consensus        31 lV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-----ga~~~-~~~~~~~-~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          31 LVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-----GADVT-LVVDPAK-EEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSEE-EECCTTT-SCHHHHHHHHHHHSSSCCSE
T ss_pred             EEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-----CCcEE-Eeccccc-cccchhhhhhhcccccCCce
Confidence            4676 6899999998888899999999999988765443 2     23222 2233222 23334444555443 46999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       102 vid~~g~  108 (170)
T d1e3ja2         102 TIDCSGN  108 (170)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999984

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=0.00023  Score=45.41  Aligned_cols=37  Identities=14%  Similarity=0.250  Sum_probs=32.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      ||+||+||+|...++.+-..|++|+.+.+++++.+.+
T Consensus        36 lI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          36 VVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             EEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            5899999999998887778999999999988776554

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.11  E-value=0.0035  Score=45.25  Aligned_cols=113  Identities=12%  Similarity=0.060  Sum_probs=69.9

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|| |.+|..+|..|+.+|.  +|++++++++.++.....+.....  ...+.+...|..+              ...-
T Consensus        11 IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~--------------l~da   75 (148)
T d1ldna1          11 VIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDD--------------CRDA   75 (148)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGG--------------TTTC
T ss_pred             EECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHH--------------hccc
Confidence            6786 9999999999999885  799999999887766655654311  2233343333321              2367


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH  141 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  141 (288)
                      |++|.++|......    +.-.+.+..|.    .+.+.+.+.+.+...    .+.++++|-+.-
T Consensus        76 Dvvvitag~~~~~~----~~R~dl~~~N~----~i~~~i~~~i~~~~p----~a~~ivvtNPvd  127 (148)
T d1ldna1          76 DLVVICAGANQKPG----ETRLDLVDKNI----AIFRSIVESVMASGF----QGLFLVATNPVD  127 (148)
T ss_dssp             SEEEECCSCCCCTT----TCSGGGHHHHH----HHHHHHHHHHHHHTC----CSEEEECSSSHH
T ss_pred             eeEEEecccccccC----cchhHHHHHHH----HHHHHHHHHHHhhCC----CceEEEecCccH
Confidence            99999999764321    22234444453    344455555444321    567777766553

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.09  E-value=0.002  Score=46.48  Aligned_cols=116  Identities=11%  Similarity=0.078  Sum_probs=68.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhC--CCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKED--DTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|+ |.+|..+|..|+.+|.  +++++++++++++.....+....  ..........|..+              ...-
T Consensus         6 IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~--------------l~~a   70 (146)
T d1hyha1           6 IIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAA--------------LADA   70 (146)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGG--------------GTTC
T ss_pred             EECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHH--------------hccc
Confidence            6785 9999999999999884  79999999988775555554421  12233333333321              1267


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      |++|.+||......+.....-.+.+..|    ..+++.+.+.+.+..    +.+-++++|=+.
T Consensus        71 diVVitaG~~~~~~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~----p~aivivvtNPv  125 (146)
T d1hyha1          71 DVVISTLGNIKLQQDNPTGDRFAELKFT----SSMVQSVGTNLKESG----FHGVLVVISNPV  125 (146)
T ss_dssp             SEEEECCSCGGGTC-------CTTHHHH----HHHHHHHHHHHHHTT----CCSEEEECSSSH
T ss_pred             cEEEEeccccccccccCCccHHHHHHHH----HHHHHHHHHHHhhcC----CCeEEEEecCcH
Confidence            9999999976432211111123344444    345566666665532    145666666654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.06  E-value=0.0065  Score=43.60  Aligned_cols=100  Identities=14%  Similarity=0.107  Sum_probs=58.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChH--HHHHHHHHHHhh----CCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMA--AANEARQLILKE----DDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~--~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |+||+|.+|..+|..|+.+|.  +++++++++.  +++.....+...    ....++.....+  +.+           .
T Consensus         5 IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~-----------~   71 (145)
T d1hyea1           5 IIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLR-----------I   71 (145)
T ss_dssp             EETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGG-----------G
T ss_pred             EECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHH-----------H
Confidence            789999999999999999984  8999998763  334334344331    112222222221  211           1


Q ss_pred             CCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHH
Q 023054           74 NLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNR  122 (288)
Q Consensus        74 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  122 (288)
                      ...-|++|.+||.....    .+.-.+.+..|..-    ++.+.+.+.+
T Consensus        72 l~~aDvVVitAG~~~~~----g~sR~dl~~~Na~i----v~~i~~~i~~  112 (145)
T d1hyea1          72 IDESDVVIITSGVPRKE----GMSRMDLAKTNAKI----VGKYAKKIAE  112 (145)
T ss_dssp             GTTCSEEEECCSCCCCT----TCCHHHHHHHHHHH----HHHHHHHHHH
T ss_pred             hccceEEEEecccccCC----CCChhhhhhhhHHH----HHHHHHHHhc
Confidence            23689999999975332    12234456655544    4444454444

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.03  E-value=0.0028  Score=46.12  Aligned_cols=116  Identities=10%  Similarity=-0.018  Sum_probs=64.9

Q ss_pred             cccCCChhHHHHHHHHHHCCC---------EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh
Q 023054            2 LAGGASGIGLETARVLALRKA---------HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA   72 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~---------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   72 (288)
                      |+||+|.+|.+++..|+..+.         +++...++.+.++.....+.... ......+...-.+.           +
T Consensus         9 IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------~   76 (154)
T d1y7ta1           9 VTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATDDPK-----------V   76 (154)
T ss_dssp             ESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEESCHH-----------H
T ss_pred             EECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccCCchh-----------h
Confidence            799999999999999998653         23344556666666655555432 22233333322221           1


Q ss_pred             cCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           73 LNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      .....|++|..+|.....    .+.-.+.+..|.    .+++.+.+.+.+...   ..+.|+++|-+.
T Consensus        77 ~~~~advViitaG~~~~p----g~~r~dl~~~N~----~i~~~~~~~i~k~a~---~~~~vivvsNPv  133 (154)
T d1y7ta1          77 AFKDADYALLVGAAPRKA----GMERRDLLQVNG----KIFTEQGRALAEVAK---KDVKVLVVGNPA  133 (154)
T ss_dssp             HTTTCSEEEECCCCCCCT----TCCHHHHHHHHH----HHHHHHHHHHHHHSC---TTCEEEECSSSH
T ss_pred             hcccccEEEeecCcCCCC----CCcHHHHHHHHH----HHHHHHHHHHHHhCC---CCcEEEEecCcH
Confidence            123689999999986431    122344455444    445555555544210   034566666543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.02  E-value=0.0021  Score=46.33  Aligned_cols=112  Identities=13%  Similarity=0.084  Sum_probs=64.9

Q ss_pred             cccCCChhHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhhC-CCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRK--AHVIIAARNMAAANEARQLILKED-DTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |.|+ |.+|..+|..|+.+|  .+|++++++++.++.....+.... ..........|..+              ....|
T Consensus        10 IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~--------------~~~ad   74 (146)
T d1ez4a1          10 LVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSD--------------CKDAD   74 (146)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGG--------------GTTCS
T ss_pred             EECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHH--------------hcccc
Confidence            6785 999999999999988  489999999987775555554321 12223444444321              23689


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      ++|.+||......    ..-.+.+..|.    .+.+.+.+.+.+..    +++.++++|-+.
T Consensus        75 ivvitag~~~~~g----~~r~~l~~~N~----~i~~~~~~~i~~~~----p~aivivvtNPv  124 (146)
T d1ez4a1          75 LVVITAGAPQKPG----ESRLDLVNKNL----NILSSIVKPVVDSG----FDGIFLVAANPV  124 (146)
T ss_dssp             EEEECCCC--------------CHHHHH----HHHHHHHHHHHHTT----CCSEEEECSSSH
T ss_pred             EEEEecccccCCC----CCHHHHHHHHH----HHHHHHHHHHhhcC----CCcEEEEeCCcc
Confidence            9999999754321    12233444443    44555555555432    145666666544

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.95  E-value=0.00066  Score=50.81  Aligned_cols=73  Identities=16%  Similarity=0.219  Sum_probs=46.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+||+|...++-.-..|++|+.+++++++.+...+ +     +... ++  |-.+.  ..+.....  ..+++|++
T Consensus        36 LI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l-----Ga~~-vi--~~~~~--~~~~~~~~--~~~gvD~v  102 (176)
T d1xa0a2          36 LVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L-----GAKE-VL--AREDV--MAERIRPL--DKQRWAAA  102 (176)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T-----TCSE-EE--ECC-----------C--CSCCEEEE
T ss_pred             EEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c-----ccce-ee--ecchh--HHHHHHHh--hccCcCEE
Confidence            689999999999777777889999999998887654432 2     3332 22  33221  11111111  23479999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      +.+.|.
T Consensus       103 id~vgg  108 (176)
T d1xa0a2         103 VDPVGG  108 (176)
T ss_dssp             EECSTT
T ss_pred             EEcCCc
Confidence            999874

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.85  E-value=0.0068  Score=43.20  Aligned_cols=112  Identities=13%  Similarity=0.150  Sum_probs=68.8

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |.|+ |.+|..++..|+.++.  ++++++++++.++.....+....+ ..+......|..+              ...-|
T Consensus         5 IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~--------------~~~ad   69 (140)
T d1a5za1           5 IVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYAD--------------LKGSD   69 (140)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGG--------------GTTCS
T ss_pred             EECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHH--------------hcCCC
Confidence            6786 8999999999998874  799999999887755555544221 2233333333221              12679


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      ++|.+||......    +.-.+.+..|    ..+++.+.+.+.+...    ++.++++|-+.
T Consensus        70 ivvitag~~~~~g----~~r~dl~~~N----~~I~~~i~~~i~~~~p----~aivivvtNPv  119 (140)
T d1a5za1          70 VVIVAAGVPQKPG----ETRLQLLGRN----ARVMKEIARNVSKYAP----DSIVIVVTNPV  119 (140)
T ss_dssp             EEEECCCCCCCSS----CCHHHHHHHH----HHHHHHHHHHHHHHCT----TCEEEECSSSH
T ss_pred             EEEEecccccCCC----cchhhhhccc----cchHHHHHHHHHhcCC----CcEEEEeCCcH
Confidence            9999999764321    1223344444    3456666666655421    46677666554

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.82  E-value=0.0037  Score=46.72  Aligned_cols=75  Identities=17%  Similarity=0.216  Sum_probs=48.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC--CCc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN--LPL   77 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~i   77 (288)
                      ||+|+ |+||...++.+-..|+ +|+++++++++.+.+. ++     +.. +++  |..+.+ ..+..+++.+..  .++
T Consensus        33 lV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~vi--~~~~~~-~~~~~~~i~~~~~~~g~  101 (182)
T d1vj0a2          33 VIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GAD-LTL--NRRETS-VEERRKAIMDITHGRGA  101 (182)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCS-EEE--ETTTSC-HHHHHHHHHHHTTTSCE
T ss_pred             EEECC-Cccchhheecccccccccccccccccccccccc-cc-----cce-EEE--eccccc-hHHHHHHHHHhhCCCCc
Confidence            57886 8999998888888998 7999999998876443 22     222 222  444322 222233333322  259


Q ss_pred             ceEEEcccc
Q 023054           78 NILINNAGI   86 (288)
Q Consensus        78 d~lv~~ag~   86 (288)
                      |++|.+.|.
T Consensus       102 Dvvid~vG~  110 (182)
T d1vj0a2         102 DFILEATGD  110 (182)
T ss_dssp             EEEEECSSC
T ss_pred             eEEeecCCc
Confidence            999999875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.81  E-value=0.0023  Score=47.24  Aligned_cols=75  Identities=12%  Similarity=0.171  Sum_probs=51.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|+|++|++|...++.+...|+ +|+++++++++.+...+ +     +.. ++  .|.++.+..+++.+..  ..+.+|+
T Consensus        32 lV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~-----Ga~-~~--i~~~~~~~~~~~~~~~--~~~~~d~  100 (170)
T d1jvba2          32 LVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A-----GAD-YV--INASMQDPLAEIRRIT--ESKGVDA  100 (170)
T ss_dssp             EEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H-----TCS-EE--EETTTSCHHHHHHHHT--TTSCEEE
T ss_pred             EEEeccccceeeeeecccccccccccccccchhhHHHHHH-c-----CCc-ee--eccCCcCHHHHHHHHh--hcccchh
Confidence            5899999999999998888885 89999999887665443 2     332 22  3555554444443322  1235999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      ++.++|.
T Consensus       101 vid~~g~  107 (170)
T d1jvba2         101 VIDLNNS  107 (170)
T ss_dssp             EEESCCC
T ss_pred             hhccccc
Confidence            9999884

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.0054  Score=45.22  Aligned_cols=76  Identities=21%  Similarity=0.236  Sum_probs=49.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|+ |++|...+..+...|+ +|+++++++++++... ++     +.. +++..+-.+.....+.++.-  ...++|+
T Consensus        31 lI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-----Ga~-~~~~~~~~~~~~~~~~~~~~--~g~g~Dv  100 (171)
T d1pl8a2          31 LVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LVLQISKESPQEIARKVEGQ--LGCKPEV  100 (171)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EEEECSSCCHHHHHHHHHHH--HTSCCSE
T ss_pred             EEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-----CCc-cccccccccccccccccccc--CCCCceE
Confidence            46665 9999999999988999 7999999998877543 22     232 23333333444443333322  1246999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.+.|.
T Consensus       101 vid~~G~  107 (171)
T d1pl8a2         101 TIECTGA  107 (171)
T ss_dssp             EEECSCC
T ss_pred             EEeccCC
Confidence            9999984

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.79  E-value=0.0013  Score=48.90  Aligned_cols=69  Identities=14%  Similarity=0.159  Sum_probs=46.2

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      ||+||+|++|...++.+-..|++|+.+++++++.+...+ +     +... +  .|..+.      .+++.. ..++|++
T Consensus        32 lI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-l-----Ga~~-~--i~~~~~------~~~~~~-~~g~D~v   95 (171)
T d1iz0a2          32 LVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-L-----GAEE-A--ATYAEV------PERAKA-WGGLDLV   95 (171)
T ss_dssp             EESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-T-----TCSE-E--EEGGGH------HHHHHH-TTSEEEE
T ss_pred             EEEeccccchhhhhhhhcccccccccccccccccccccc-c-----ccce-e--eehhhh------hhhhhc-ccccccc
Confidence            589999999999888777889999999998876654332 2     2322 1  243321      122222 3479999


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      +.+.|
T Consensus        96 ~d~~G  100 (171)
T d1iz0a2          96 LEVRG  100 (171)
T ss_dssp             EECSC
T ss_pred             ccccc
Confidence            98766

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.76  E-value=0.0052  Score=43.95  Aligned_cols=113  Identities=12%  Similarity=0.045  Sum_probs=67.9

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCC--hHHHHHHHHHHHh-hCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARN--MAAANEARQLILK-EDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~--~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |+||+|.+|.++|..|+.++.  ++++++.+  ++.++.....+.. .....+......|..+              ...
T Consensus         5 IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~--------------~~~   70 (142)
T d1o6za1           5 VVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYED--------------TAG   70 (142)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGG--------------GTT
T ss_pred             EECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHH--------------hhh
Confidence            789999999999999999986  69999854  3444433333432 1113344444444322              126


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      -|++|..||....+    .+.-.+.+..|    ..+.+.+.+.+.+..    +++.+++++-+.
T Consensus        71 aDiVvitaG~~~~~----g~~R~dl~~~N----~~I~~~i~~~i~~~~----p~~i~ivvtNPv  122 (142)
T d1o6za1          71 SDVVVITAGIPRQP----GQTRIDLAGDN----APIMEDIQSSLDEHN----DDYISLTTSNPV  122 (142)
T ss_dssp             CSEEEECCCCCCCT----TCCHHHHHHHH----HHHHHHHHHHHHTTC----SCCEEEECCSSH
T ss_pred             cCEEEEeccccccc----CCchhhHHHHH----HHHHHHHHHHHHhcC----CCceEEEecChH
Confidence            89999999975332    12334455555    345556666665532    146666666544

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.72  E-value=0.012  Score=43.62  Aligned_cols=115  Identities=8%  Similarity=-0.081  Sum_probs=63.7

Q ss_pred             cccCCChhHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh
Q 023054            2 LAGGASGIGLETARVLALRKA-------HVIIAARNM--AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA   72 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   72 (288)
                      ||||+|.||.+++..|++...       .+.+.+.+.  +.++....++...... ....+.. -++.   .       +
T Consensus        29 I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~-~~~~~~~-~~~~---~-------~   96 (175)
T d7mdha1          29 VSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYP-LLREVSI-GIDP---Y-------E   96 (175)
T ss_dssp             EETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT-TEEEEEE-ESCH---H-------H
T ss_pred             EECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccc-cccCccc-cccc---h-------h
Confidence            899999999999999997532       566666644  4445555555443211 1222211 1121   1       1


Q ss_pred             cCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCc
Q 023054           73 LNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSI  139 (288)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  139 (288)
                      .+...|++|..+|....    ..+...+.+..|..    +.+...+.+.+...   ....|+++|-+
T Consensus        97 ~~~~aDvVvi~ag~~rk----pg~tR~Dll~~N~~----I~k~~~~~i~~~a~---~~~~vlvv~NP  152 (175)
T d7mdha1          97 VFEDVDWALLIGAKPRG----PGMERAALLDINGQ----IFADQGKALNAVAS---KNVKVLVVGNP  152 (175)
T ss_dssp             HTTTCSEEEECCCCCCC----TTCCHHHHHHHHHH----HHHHHHHHHHHHSC---TTCEEEECSSS
T ss_pred             hccCCceEEEeeccCCC----CCCcHHHHHHHHHH----HHHHHHHHHHhhCC---CCcEEEEecCc
Confidence            13478999999998643    22344556666644    44555555544210   03456666543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.70  E-value=0.017  Score=42.04  Aligned_cols=112  Identities=10%  Similarity=0.048  Sum_probs=70.1

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhC--CCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKED--DTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |.|+ |.+|..++..|+.+|.  ++++++++++.++.....+....  -.........|..+              ...-
T Consensus        25 IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~--------------~~~a   89 (160)
T d1i0za1          25 VVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV--------------TANS   89 (160)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG--------------GTTC
T ss_pred             EECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh--------------cccc
Confidence            6785 9999999999999996  79999999888765555554321  12222222333332              1267


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      |++|..||.....    .+.-.+.+..|    ..+.+.+.+.+.+...    ++-++++|-+.
T Consensus        90 diVVitAg~~~~~----g~tR~~l~~~N----~~i~~~i~~~i~~~~p----~aiiivvtNPv  140 (160)
T d1i0za1          90 KIVVVTAGVRQQE----GESRLNLVQRN----VNVFKFIIPQIVKYSP----DCIIIVVSNPV  140 (160)
T ss_dssp             SEEEECCSCCCCT----TCCGGGGHHHH----HHHHHHHHHHHHHHCT----TCEEEECSSSH
T ss_pred             cEEEEecCCcccc----CcchHHHHHHH----HHHHHHHHHHHHhcCC----CcEEEEeCCch
Confidence            9999999975432    12223444444    4456666666655421    46677777655

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.68  E-value=0.0066  Score=45.05  Aligned_cols=78  Identities=12%  Similarity=0.096  Sum_probs=53.2

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH---------------hhCCCCceEEEEecCCChHHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLIL---------------KEDDTARVDTLKLDLSSIASIKDFAQN   69 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~   69 (288)
                      |.|-+|.++|+.|+++|++|++++|++++.+++.+.-.               ...  .....+...+.+.+.+..+.+.
T Consensus         9 GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~ii~~~~~~~~v~~v~~~   86 (176)
T d2pgda2           9 GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL--KKPRRIILLVKAGQAVDNFIEK   86 (176)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB--CSSCEEEECSCTTHHHHHHHHH
T ss_pred             eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh--cccceEEEecCchHHHHHHHHH
Confidence            35889999999999999999999999998887654311               111  1223444456666777777777


Q ss_pred             HHhcCCCcceEEEcc
Q 023054           70 FIALNLPLNILINNA   84 (288)
Q Consensus        70 ~~~~~~~id~lv~~a   84 (288)
                      +.....+=+++|.+.
T Consensus        87 l~~~~~~g~iiid~s  101 (176)
T d2pgda2          87 LVPLLDIGDIIIDGG  101 (176)
T ss_dssp             HHHHCCTTCEEEECS
T ss_pred             HHhccccCcEEEecC
Confidence            666544445555554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.65  E-value=0.018  Score=41.08  Aligned_cols=112  Identities=10%  Similarity=0.058  Sum_probs=66.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC-CCceEEE-EecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD-TARVDTL-KLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |.|+ |.+|.++|..|+.+|.  ++++++++++.++.....+....+ ....... .-|..+              ...-
T Consensus         6 IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~--------------~~da   70 (143)
T d1llda1           6 VIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEI--------------CRDA   70 (143)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGG--------------GTTC
T ss_pred             EECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHH--------------hhCC
Confidence            6786 9999999999999986  799999999877655444543211 1112222 222221              1257


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      |++|..||.....    .+.-.+.+..|.    .+++.+.+.+.+...    ++.++++|-+.
T Consensus        71 DvVVitaG~~~~~----g~~R~dl~~~N~----~i~~~i~~~i~~~~p----~ai~ivvtNPv  121 (143)
T d1llda1          71 DMVVITAGPRQKP----GQSRLELVGATV----NILKAIMPNLVKVAP----NAIYMLITNPV  121 (143)
T ss_dssp             SEEEECCCCCCCT----TCCHHHHHHHHH----HHHHHHHHHHHHHCT----TSEEEECCSSH
T ss_pred             cEEEEecccccCC----CCchhhhhhhhH----HHHHHHHHHHHhhCC----CeEEEEeCCch
Confidence            9999999975432    122234555554    455555555554321    45666666544

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.59  E-value=0.0015  Score=46.30  Aligned_cols=69  Identities=12%  Similarity=0.092  Sum_probs=50.9

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      |.|+ |-+|+.+++.|.++|+.|++++.+++..++..+    .    ...++..|.++++.++++-  +    ...|.+|
T Consensus         5 IiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~----~----~~~~~~gd~~~~~~l~~a~--i----~~a~~vi   69 (134)
T d2hmva1           5 VIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y----ATHAVIANATEENELLSLG--I----RNFEYVI   69 (134)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT----T----CSEEEECCTTCTTHHHHHT--G----GGCSEEE
T ss_pred             EECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH----h----CCcceeeecccchhhhccC--C----ccccEEE
Confidence            5554 799999999999999999999999988776432    2    2456678999988776541  1    2467777


Q ss_pred             Eccc
Q 023054           82 NNAG   85 (288)
Q Consensus        82 ~~ag   85 (288)
                      ...+
T Consensus        70 ~~~~   73 (134)
T d2hmva1          70 VAIG   73 (134)
T ss_dssp             ECCC
T ss_pred             EEcC
Confidence            5544

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0039  Score=46.07  Aligned_cols=66  Identities=20%  Similarity=0.279  Sum_probs=48.2

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      |+||.+++++..|.+.|.+|+++.|+.++.+++.+.+...+   .+..+  +..+.            .....|++||+.
T Consensus        25 GaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~---~~~~~--~~~~~------------~~~~~dliIN~T   87 (170)
T d1nyta1          25 GAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SIQAL--SMDEL------------EGHEFDLIINAT   87 (170)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SEEEC--CSGGG------------TTCCCSEEEECC
T ss_pred             CCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc---ccccc--ccccc------------cccccceeeccc
Confidence            45899999999999999999999999999998887765542   23332  22211            123689999997


Q ss_pred             ccC
Q 023054           85 GIM   87 (288)
Q Consensus        85 g~~   87 (288)
                      ...
T Consensus        88 p~G   90 (170)
T d1nyta1          88 SSG   90 (170)
T ss_dssp             SCG
T ss_pred             ccC
Confidence            543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0084  Score=42.97  Aligned_cols=115  Identities=13%  Similarity=0.111  Sum_probs=65.4

Q ss_pred             cccCCChhHHHHHHHHHHC-C--CEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALR-K--AHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |+|++|.+|.++|..|+.+ +  .++++.+..+. .+.....+...........+ ..-.+   .+.+        ..-|
T Consensus         5 IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h~~~~~~~~~~-~~~~~---~~~~--------~~aD   71 (145)
T d2cmda1           5 VLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGF-SGEDA---TPAL--------EGAD   71 (145)
T ss_dssp             EETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHTSCSSCEEEEE-CSSCC---HHHH--------TTCS
T ss_pred             EEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHCCccccCCcEE-EcCCC---cccc--------CCCC
Confidence            7899999999999988643 4  58999998653 33333344443111222221 22222   2221        1569


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH  141 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  141 (288)
                      ++|..||.....    .+.-.+.+..|..-    .+.+.+.+.+..    +++.|+++|.+.-
T Consensus        72 vvvitaG~~~k~----g~~R~dl~~~N~~i----~~~v~~~i~~~~----p~aivivvtNPvD  122 (145)
T d2cmda1          72 VVLISAGVRRKP----GMDRSDLFNVNAGI----VKNLVQQVAKTC----PKACIGIITNPVN  122 (145)
T ss_dssp             EEEECCSCCCCT----TCCGGGGHHHHHHH----HHHHHHHHHHHC----TTSEEEECSSSHH
T ss_pred             EEEECCCccCCC----CcchhhHHHHHHHH----HHHHHHHHHhhC----CCcEEEEccCCch
Confidence            999999976432    12344556666444    444444444432    1467777777654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.51  E-value=0.014  Score=42.37  Aligned_cols=112  Identities=9%  Similarity=0.093  Sum_probs=68.4

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCC--CCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDD--TARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |.|+ |.+|..+|..|+.+|.  ++++++++++.++.....+.....  +........|..+              ...-
T Consensus        24 IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~--------------~~~a   88 (159)
T d2ldxa1          24 VVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNV--------------SANS   88 (159)
T ss_dssp             EECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGG--------------GTTE
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhh--------------hccc
Confidence            6785 9999999999999985  799999999887766666654321  1122222233321              2368


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      |++|..||......    +.-.+.++.|..    +.+.+.+.+.+..    +.+.++++|-+.
T Consensus        89 divvitag~~~~~~----~~R~dll~~N~~----i~~~i~~~i~~~~----p~~ivivvtNPv  139 (159)
T d2ldxa1          89 KLVIITAGARMVSG----QTRLDLLQRNVA----IMKAIVPGVIQNS----PDCKIIVVTNPV  139 (159)
T ss_dssp             EEEEECCSCCCCTT----TCSSCTTHHHHH----HHHHHTTTHHHHS----TTCEEEECSSSH
T ss_pred             cEEEEecccccCCC----CCHHHHHHHHHH----HHHHHHHHHhccC----CCeEEEEeCCcH
Confidence            99999999754322    122233444443    4444555444432    156777777755

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.49  E-value=0.003  Score=47.54  Aligned_cols=74  Identities=9%  Similarity=0.078  Sum_probs=47.3

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      ||+||+||+|...++..-..|++ |+.+++++++..+...++     +..   ...|..+.+..+. ++++.  ..++|+
T Consensus        35 LI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad---~vi~~~~~~~~~~-~~~~~--~~GvDv  103 (187)
T d1vj1a2          35 VVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFD---AAVNYKTGNVAEQ-LREAC--PGGVDV  103 (187)
T ss_dssp             EESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCS---EEEETTSSCHHHH-HHHHC--TTCEEE
T ss_pred             EEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cce---EEeeccchhHHHH-HHHHh--ccCceE
Confidence            58999999999977766668986 555666766655555443     222   2336665443333 33332  236999


Q ss_pred             EEEccc
Q 023054           80 LINNAG   85 (288)
Q Consensus        80 lv~~ag   85 (288)
                      ++.+.|
T Consensus       104 v~D~vG  109 (187)
T d1vj1a2         104 YFDNVG  109 (187)
T ss_dssp             EEESSC
T ss_pred             EEecCC
Confidence            998887

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.34  E-value=0.0018  Score=48.42  Aligned_cols=37  Identities=14%  Similarity=0.250  Sum_probs=32.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      ||+||+||+|...++..-..|++|+.+++++++.+.+
T Consensus        36 lV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          36 VVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             EEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            6899999999998877777999999999998876544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.29  E-value=0.014  Score=42.50  Aligned_cols=77  Identities=25%  Similarity=0.163  Sum_probs=48.9

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH--------hhCCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLIL--------KEDDTARVDTLKLDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |.|-+|.++|+.|.++|++|++.+|+++..++..+.-.        +......+.++.+   ..+.++++++++.....+
T Consensus         7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~~~l~~   83 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLIPHLSP   83 (165)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHGGGSCT
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhhhhccc
Confidence            45999999999999999999999999887766543210        0111233333322   356777778777665433


Q ss_pred             cceEEEcc
Q 023054           77 LNILINNA   84 (288)
Q Consensus        77 id~lv~~a   84 (288)
                      =.++++.+
T Consensus        84 ~~iv~~~~   91 (165)
T d2f1ka2          84 TAIVTDVA   91 (165)
T ss_dssp             TCEEEECC
T ss_pred             ccceeecc
Confidence            33444443

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.26  E-value=0.0051  Score=45.65  Aligned_cols=74  Identities=18%  Similarity=0.147  Sum_probs=48.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|+ |+||...++.+-..|+ +|+++++++++.+... ++     +.. ++  +|..+.+..+++.+.. . ..++|+
T Consensus        32 lI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l-----Ga~-~~--i~~~~~~~~~~v~~~t-~-g~G~D~   99 (174)
T d1jqba2          32 VVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY-----GAT-DI--LNYKNGHIEDQVMKLT-N-GKGVDR   99 (174)
T ss_dssp             EEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH-----TCS-EE--ECGGGSCHHHHHHHHT-T-TSCEEE
T ss_pred             EEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh-----Ccc-cc--ccccchhHHHHHHHHh-h-ccCcce
Confidence            46775 8999998888888897 6999999988766543 33     332 22  3555544444333321 1 235999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       100 vid~~g~  106 (174)
T d1jqba2         100 VIMAGGG  106 (174)
T ss_dssp             EEECSSC
T ss_pred             EEEccCC
Confidence            9999984

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.26  E-value=0.023  Score=41.00  Aligned_cols=115  Identities=7%  Similarity=-0.035  Sum_probs=60.9

Q ss_pred             cccCCChhHHHHHHHHHHCCC-------EEEEEeCCh--HHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHh
Q 023054            2 LAGGASGIGLETARVLALRKA-------HVIIAARNM--AAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIA   72 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   72 (288)
                      |+||+|.+|.+++..|++.+.       .+++.+.++  ..++....++.... ......+  ..++..  .+       
T Consensus         8 IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~-~~~~~~~--~~~~~~--~~-------   75 (154)
T d5mdha1           8 VTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA-LPLLKDV--IATDKE--EI-------   75 (154)
T ss_dssp             ESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC-CTTEEEE--EEESCH--HH-------
T ss_pred             EECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccc-ccccccc--ccCccc--cc-------
Confidence            799999999999999987542       467776554  33444443333321 1122222  222111  11       


Q ss_pred             cCCCcceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCc
Q 023054           73 LNLPLNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSI  139 (288)
Q Consensus        73 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~  139 (288)
                      .....|++|..+|......    +.-++.+..|.    .+.+.+.+.+.+...   ..+.++++|-+
T Consensus        76 ~~~~~dvVVitag~~~~~g----~sr~dll~~N~----~i~k~~~~~i~k~a~---~~~~iivvsNP  131 (154)
T d5mdha1          76 AFKDLDVAILVGSMPRRDG----MERKDLLKANV----KIFKCQGAALDKYAK---KSVKVIVVGNP  131 (154)
T ss_dssp             HTTTCSEEEECCSCCCCTT----CCTTTTHHHHH----HHHHHHHHHHHHHSC---TTCEEEECSSS
T ss_pred             ccCCceEEEEecccCCCCC----CchhHHHHHhH----HHHHHHHHHHHhhCC---CceEEEEecCc
Confidence            1236899999999865422    12233445444    455555555544210   03445555543

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.22  E-value=0.0084  Score=42.83  Aligned_cols=112  Identities=15%  Similarity=0.105  Sum_probs=62.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhCCC-CceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKEDDT-ARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |.|+ |.+|..++..|+.++.  ++++++++++.++.....+....+. ........|..              ....-|
T Consensus         6 IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~--------------~~~~ad   70 (142)
T d1y6ja1           6 IIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYS--------------DVKDCD   70 (142)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGG--------------GGTTCS
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHH--------------HhCCCc
Confidence            6786 9999999999999885  7999999998766555555442221 12222222211              123679


Q ss_pred             eEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           79 ILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      ++|..||.....    .+.-.+.+..|.    .+.+.+.+.+.+...    ++.++++|-+.
T Consensus        71 ivvitag~~~~~----~~~r~~l~~~N~----~i~~~i~~~i~~~~p----~ai~ivvtNPv  120 (142)
T d1y6ja1          71 VIVVTAGANRKP----GETRLDLAKKNV----MIAKEVTQNIMKYYN----HGVILVVSNPV  120 (142)
T ss_dssp             EEEECCCC----------CHHHHHHHHH----HHHHHHHHHHHHHCC----SCEEEECSSSH
T ss_pred             eEEEecccccCc----CcchhHHhhHHH----HHHHHHHHHhhccCC----CceEEEecChH
Confidence            999999976432    122234444444    455555565555321    46667666654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.19  E-value=0.0071  Score=44.70  Aligned_cols=67  Identities=15%  Similarity=0.187  Sum_probs=50.7

Q ss_pred             cCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            4 GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      -|+||.+++++..|.+.+.+|+++.|+.++++...+.+...   ..+.....|-.              .....|++||+
T Consensus        24 lGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~~~~~--------------~~~~~diiIN~   86 (171)
T d1p77a1          24 LGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQAVSMDSI--------------PLQTYDLVINA   86 (171)
T ss_dssp             ECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGGGC--------------CCSCCSEEEEC
T ss_pred             ECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc---cccchhhhccc--------------cccccceeeec
Confidence            46799999999999998889999999999999988887654   23444444421              12468999999


Q ss_pred             cccC
Q 023054           84 AGIM   87 (288)
Q Consensus        84 ag~~   87 (288)
                      ....
T Consensus        87 tp~g   90 (171)
T d1p77a1          87 TSAG   90 (171)
T ss_dssp             CCC-
T ss_pred             cccc
Confidence            8654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.19  E-value=0.011  Score=42.80  Aligned_cols=119  Identities=13%  Similarity=0.064  Sum_probs=66.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhC--CCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKED--DTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      |.|+ |.+|..++..|+..+. ++++++.+++.++.....+....  .+.......  -++.   +..+       ..-|
T Consensus        12 IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~---~~~~-------~~ad   78 (154)
T d1pzga1          12 MIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSY---EAAL-------TGAD   78 (154)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSH---HHHH-------TTCS
T ss_pred             EECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec--cCch---hhhh-------cCCC
Confidence            6786 9999999999988884 89999998877665555444311  011111211  1111   1111       2679


Q ss_pred             eEEEccccCCCCCCCC-CCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCccc
Q 023054           79 ILINNAGIMFCPYQIS-EDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH  141 (288)
Q Consensus        79 ~lv~~ag~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~  141 (288)
                      ++|..+|....+.+.+ ...-.+.+..|..    +++.+.+.+.+...    ++.++++|-+.-
T Consensus        79 iVvitag~~~~~g~~~~~~tR~~l~~~n~~----iv~~i~~~i~~~~p----~aiviivsNPvd  134 (154)
T d1pzga1          79 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSK----IIREIGQNIKKYCP----KTFIIVVTNPLD  134 (154)
T ss_dssp             EEEECCSCSSCTTCCGGGCCGGGGHHHHHH----HHHHHHHHHHHHCT----TCEEEECCSSHH
T ss_pred             eEEEecccccCCCCCCcccchhhhhhhhHH----HHHHHHHHHHhcCC----CcEEEEeCCcHH
Confidence            9999999865432111 1122334444443    44455555544321    467777776553

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.10  E-value=0.007  Score=43.23  Aligned_cols=113  Identities=15%  Similarity=0.101  Sum_probs=64.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhC--CCCceEEEEecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKED--DTARVDTLKLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |+|| |.+|..++..|+..|.  ++++++.+++.++.....+....  ...+..+...  .+.+.           ....
T Consensus         5 IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~~da   70 (142)
T d1guza1           5 VIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------TANS   70 (142)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------GTTC
T ss_pred             EECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------hcCC
Confidence            6786 9999999999999884  89999999877665444443210  0122333322  22211           1267


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      |++|.+||......    +.-.+.+..|..    +.+.+.+.+.+..    +++-++++|-+.
T Consensus        71 dvvvitag~~~~~g----~~r~~l~~~N~~----i~~~i~~~i~~~~----p~aivivvtNPv  121 (142)
T d1guza1          71 DIVIITAGLPRKPG----MTREDLLMKNAG----IVKEVTDNIMKHS----KNPIIIVVSNPL  121 (142)
T ss_dssp             SEEEECCSCCCCTT----CCHHHHHHHHHH----HHHHHHHHHHHHC----SSCEEEECCSSH
T ss_pred             eEEEEEEecCCCCC----CchHHHHHHHHH----HHHHHHHHhhccC----CCeEEEEecCCh
Confidence            99999999754321    122334444433    3444444444432    145666666554

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.03  E-value=0.0019  Score=47.78  Aligned_cols=38  Identities=24%  Similarity=0.372  Sum_probs=31.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      ||+||+||+|...++..-..|++|+.+.+++++.+.+.
T Consensus        28 LV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~   65 (167)
T d1tt7a2          28 LVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK   65 (167)
T ss_dssp             EEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             EEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH
Confidence            68999999999977766668999999999887766543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.03  E-value=0.011  Score=42.58  Aligned_cols=72  Identities=14%  Similarity=0.066  Sum_probs=53.9

Q ss_pred             cCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            4 GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      -|.+.+|..+++.|.++|.+|+++..+++...+.......    ..+.++..|.++++.++++-      ..+.|.+|..
T Consensus         9 ~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~----~~~~vi~Gd~~d~~~L~~a~------i~~a~~vi~~   78 (153)
T d1id1a_           9 CGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKAG------IDRCRAILAL   78 (153)
T ss_dssp             ECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHHT------TTTCSEEEEC
T ss_pred             ECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc----CCcEEEEccCcchHHHHHhc------cccCCEEEEc
Confidence            3457999999999999999999999998776555554432    35788999999987665542      2356778766


Q ss_pred             cc
Q 023054           84 AG   85 (288)
Q Consensus        84 ag   85 (288)
                      .+
T Consensus        79 ~~   80 (153)
T d1id1a_          79 SD   80 (153)
T ss_dssp             SS
T ss_pred             cc
Confidence            53

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.00  E-value=0.013  Score=41.72  Aligned_cols=112  Identities=13%  Similarity=0.041  Sum_probs=66.4

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhC--CCCceEEEE-ecCCChHHHHHHHHHHHhcCCC
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILKED--DTARVDTLK-LDLSSIASIKDFAQNFIALNLP   76 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~~   76 (288)
                      |.|+ |.+|.++|..|+.+|.  ++++++++++.++.....+....  ......... -|..+              ...
T Consensus         5 IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~--------------~~~   69 (142)
T d1ojua1           5 FVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL--------------LKG   69 (142)
T ss_dssp             EECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGG--------------GTT
T ss_pred             EECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHH--------------hcc
Confidence            6786 9999999999998885  69999999988765544444321  112222322 23322              126


Q ss_pred             cceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           77 LNILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        77 id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      -|++|..||.....    ...-.+.+..|    ..+.+.+.+.+.+..    +++.++++|-+.
T Consensus        70 adiVvitag~~~~~----g~~r~~l~~~n----~~i~~~i~~~i~~~~----p~aivivvtNPv  121 (142)
T d1ojua1          70 SEIIVVTAGLARKP----GMTRLDLAHKN----AGIIKDIAKKIVENA----PESKILVVTNPM  121 (142)
T ss_dssp             CSEEEECCCCCCCS----SCCHHHHHHHH----HHHHHHHHHHHHTTS----TTCEEEECSSSH
T ss_pred             ccEEEEeccccCCC----CCchHHHHHHh----hHHHHHHHHHHHhhC----CCcEEEEecCCh
Confidence            79999999965432    12223344433    445555555555532    146667666654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.92  E-value=0.013  Score=42.14  Aligned_cols=118  Identities=11%  Similarity=0.058  Sum_probs=69.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhh--CCCCceEEEEec-CCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKE--DDTARVDTLKLD-LSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D-l~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |.|+ |++|..++..|+.++. ++++++++++.++.....+...  ....+..+...+ ..+              ...-
T Consensus         8 IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~--------------~~~a   72 (150)
T d1t2da1           8 LVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDD--------------LAGA   72 (150)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGG--------------GTTC
T ss_pred             EECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccc--------------cCCC
Confidence            6785 9999999998888774 7999999887766555555432  112333343322 211              2367


Q ss_pred             ceEEEccccCCCCCCC-CCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcccc
Q 023054           78 NILINNAGIMFCPYQI-SEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQ  142 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~~~  142 (288)
                      |++|.++|.....-.. ....-...+..|.    .+++.+.+.+.+..    +++.++++|-+.-.
T Consensus        73 dvvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~~----p~aivivvtNPvD~  130 (150)
T d1t2da1          73 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKNC----PNAFIIVVTNPVDV  130 (150)
T ss_dssp             SEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHHC----TTSEEEECSSSHHH
T ss_pred             cEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhcC----CCeEEEEecCchHH
Confidence            9999999976543211 1122334555554    44555555555432    14667777765533

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.88  E-value=0.025  Score=41.07  Aligned_cols=35  Identities=17%  Similarity=0.209  Sum_probs=31.0

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQ   39 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~   39 (288)
                      |.|-+|..+|+.|+++|++|++.+|++++.+++.+
T Consensus         7 GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           7 GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            45889999999999999999999999988777654

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.79  E-value=0.016  Score=42.39  Aligned_cols=71  Identities=13%  Similarity=0.076  Sum_probs=45.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|+ |++|...++.+-..|++|+++++++++.+...+ +     +... ++  |..+....      .+...+..|++
T Consensus        32 lI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-l-----Ga~~-~i--~~~~~~~~------~~~~~~~~d~v   95 (168)
T d1piwa2          32 GIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GADH-YI--ATLEEGDW------GEKYFDTFDLI   95 (168)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE-EE--EGGGTSCH------HHHSCSCEEEE
T ss_pred             EEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-c-----CCcE-Ee--eccchHHH------HHhhhcccceE
Confidence            46775 899999888777789999999999887765433 3     3332 22  22221111      12234578999


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      +.+.+..
T Consensus        96 i~~~~~~  102 (168)
T d1piwa2          96 VVCASSL  102 (168)
T ss_dssp             EECCSCS
T ss_pred             EEEecCC
Confidence            9987754

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.72  E-value=0.015  Score=42.81  Aligned_cols=73  Identities=12%  Similarity=0.178  Sum_probs=47.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKAH-VIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|+ |+||...+..+...|++ |+++++++++++.+. ++     +. .++  .|..+.+..++ +.++.  .+++|+
T Consensus        33 lI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~-----Ga-~~~--i~~~~~~~~~~-i~~~t--~gg~D~   99 (174)
T d1f8fa2          33 VTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GA-THV--INSKTQDPVAA-IKEIT--DGGVNF   99 (174)
T ss_dssp             EEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TC-SEE--EETTTSCHHHH-HHHHT--TSCEEE
T ss_pred             EEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc-----CC-eEE--EeCCCcCHHHH-HHHHc--CCCCcE
Confidence            46776 89999999888788885 566677877766543 33     22 223  35555443333 33332  347999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.+.|.
T Consensus       100 vid~~G~  106 (174)
T d1f8fa2         100 ALESTGS  106 (174)
T ss_dssp             EEECSCC
T ss_pred             EEEcCCc
Confidence            9999984

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.63  E-value=0.031  Score=40.60  Aligned_cols=71  Identities=15%  Similarity=0.127  Sum_probs=45.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.| +|+||...++.+-..|++|+++++++++++...+ +     +.. ++  .|.++.+..+.+.+.    ..+.+.+
T Consensus        32 lV~G-aG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~-~-----Ga~-~~--i~~~~~~~~~~~~~~----~~g~~~~   97 (166)
T d1llua2          32 AISG-IGGLGHVAVQYARAMGLHVAAIDIDDAKLELARK-L-----GAS-LT--VNARQEDPVEAIQRD----IGGAHGV   97 (166)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCS-EE--EETTTSCHHHHHHHH----HSSEEEE
T ss_pred             EEee-ccccHHHHHHHHHHcCCccceecchhhHHHhhhc-c-----Ccc-cc--ccccchhHHHHHHHh----hcCCccc
Confidence            4656 4999999888888889999999999888765432 2     232 22  366665555544332    2345555


Q ss_pred             EEccc
Q 023054           81 INNAG   85 (288)
Q Consensus        81 v~~ag   85 (288)
                      |-+++
T Consensus        98 i~~~~  102 (166)
T d1llua2          98 LVTAV  102 (166)
T ss_dssp             EECCS
T ss_pred             ccccc
Confidence            55544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.011  Score=44.45  Aligned_cols=40  Identities=20%  Similarity=0.263  Sum_probs=34.0

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLIL   42 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~   42 (288)
                      |.|| |-+|..+|..++++|++|++.+++++.+++..+.+.
T Consensus         9 ViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           9 VIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            4565 779999999999999999999999988777666554

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.49  E-value=0.0077  Score=44.65  Aligned_cols=37  Identities=22%  Similarity=0.172  Sum_probs=31.6

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQ   39 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~   39 (288)
                      |.|+ |.+|.++|..|+++|++|.+++|+++..+...+
T Consensus         6 IiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           6 VLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            4454 899999999999999999999999988776554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.43  E-value=0.025  Score=40.53  Aligned_cols=64  Identities=20%  Similarity=0.126  Sum_probs=43.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcC
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALN   74 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (288)
                      |.||.|-+|..+++.|.++|++|.+.+|+.....+...   .   ...+....   .....+...+.++....
T Consensus        14 iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~---~---~~~~v~~~---~~~~~~~~v~~~~~~~~   77 (152)
T d2pv7a2          14 IVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL---A---NADVVIVS---VPINLTLETIERLKPYL   77 (152)
T ss_dssp             EETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH---T---TCSEEEEC---SCGGGHHHHHHHHGGGC
T ss_pred             EEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh---h---hccccccc---cchhhheeeeecccccc
Confidence            67889999999999999999999999998765443221   1   23333333   33455666666665543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.42  E-value=0.034  Score=40.97  Aligned_cols=75  Identities=15%  Similarity=0.146  Sum_probs=48.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHH-HHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS-IKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~~id   78 (288)
                      +|+| .||+|...+..+...|+ +|+++++++++++...+ +     +... ++  |..+.+. .+.+.+..  ...++|
T Consensus        34 lI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~-----GA~~-~i--n~~~~~~~~~~~~~~~--~g~G~d  101 (176)
T d1d1ta2          34 VVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V-----GATE-CI--SPKDSTKPISEVLSEM--TGNNVG  101 (176)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H-----TCSE-EE--CGGGCSSCHHHHHHHH--HTSCCC
T ss_pred             EEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c-----CCcE-EE--CccccchHHHHHHHHh--ccccce
Confidence            3666 59999999999999995 89999999998875443 3     3332 22  3333222 22222222  134799


Q ss_pred             eEEEccccC
Q 023054           79 ILINNAGIM   87 (288)
Q Consensus        79 ~lv~~ag~~   87 (288)
                      ++|.+.|..
T Consensus       102 ~vi~~~g~~  110 (176)
T d1d1ta2         102 YTFEVIGHL  110 (176)
T ss_dssp             EEEECSCCH
T ss_pred             EEEEeCCch
Confidence            999998853

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.38  E-value=0.02  Score=41.81  Aligned_cols=69  Identities=14%  Similarity=0.213  Sum_probs=46.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      +|.|+ |+||...++.+-..|++++++++++++.+. .+++     +.. .+  +|..+.+...       ....++|++
T Consensus        35 lI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l-----Gad-~~--i~~~~~~~~~-------~~~~~~D~v   97 (168)
T d1uufa2          35 GVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL-----GAD-EV--VNSRNADEMA-------AHLKSFDFI   97 (168)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH-----TCS-EE--EETTCHHHHH-------TTTTCEEEE
T ss_pred             EEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc-----CCc-EE--EECchhhHHH-------HhcCCCcee
Confidence            46775 999999888777799999999998887643 3333     332 22  3655544322       223479999


Q ss_pred             EEcccc
Q 023054           81 INNAGI   86 (288)
Q Consensus        81 v~~ag~   86 (288)
                      |.+.|.
T Consensus        98 id~~g~  103 (168)
T d1uufa2          98 LNTVAA  103 (168)
T ss_dssp             EECCSS
T ss_pred             eeeeec
Confidence            999884

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.37  E-value=0.057  Score=39.62  Aligned_cols=37  Identities=19%  Similarity=0.166  Sum_probs=32.8

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLI   41 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~   41 (288)
                      |.|-+|.++|++|+++|++|.+++|++++.+++.++-
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence            5688999999999999999999999999988776653

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.34  E-value=0.015  Score=43.88  Aligned_cols=75  Identities=19%  Similarity=0.138  Sum_probs=47.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.|+ |+||...+..+...|+ +|+++++++++++...+ +     +.. +  ..|-.+.+..+++.+ +. ....+|+
T Consensus        30 lV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~-----Ga~-~--~~~~~~~~~~~~i~~-~t-~g~g~D~   97 (195)
T d1kola2          30 YVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q-----GFE-I--ADLSLDTPLHEQIAA-LL-GEPEVDC   97 (195)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T-----TCE-E--EETTSSSCHHHHHHH-HH-SSSCEEE
T ss_pred             EEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-c-----ccc-E--EEeCCCcCHHHHHHH-Hh-CCCCcEE
Confidence            47775 8999887777767787 79999999887764432 1     332 1  234444433333333 22 2346999


Q ss_pred             EEEccccC
Q 023054           80 LINNAGIM   87 (288)
Q Consensus        80 lv~~ag~~   87 (288)
                      +|.+.|..
T Consensus        98 vid~vG~~  105 (195)
T d1kola2          98 AVDAVGFE  105 (195)
T ss_dssp             EEECCCTT
T ss_pred             EEECcccc
Confidence            99999854

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.27  E-value=0.02  Score=42.12  Aligned_cols=75  Identities=16%  Similarity=0.191  Sum_probs=48.5

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC-hHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id   78 (288)
                      +|.|+ +|+|...+..+...|+ +|+++++++++.+...+ +     +.. +++  |..+ .+.+.+..+...  .+++|
T Consensus        33 lV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~-----Ga~-~~i--~~~~~~~~~~~~~~~~~--~~G~D  100 (176)
T d2jhfa2          33 AVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V-----GAT-ECV--NPQDYKKPIQEVLTEMS--NGGVD  100 (176)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCS-EEE--CGGGCSSCHHHHHHHHT--TSCBS
T ss_pred             EEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h-----CCe-eEE--ecCCchhHHHHHHHHHh--cCCCC
Confidence            47777 7899999999999985 89999999988765433 2     222 222  2222 233444444332  34799


Q ss_pred             eEEEccccC
Q 023054           79 ILINNAGIM   87 (288)
Q Consensus        79 ~lv~~ag~~   87 (288)
                      ++|-+.|..
T Consensus       101 ~vid~~G~~  109 (176)
T d2jhfa2         101 FSFEVIGRL  109 (176)
T ss_dssp             EEEECSCCH
T ss_pred             EEEecCCch
Confidence            999998853

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.13  E-value=0.012  Score=43.18  Aligned_cols=39  Identities=18%  Similarity=0.222  Sum_probs=33.1

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLI   41 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~   41 (288)
                      |.| +||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        22 IlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          22 VHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             EEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             EEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            455 48999999999999997 7999999999888776654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.13  E-value=0.04  Score=40.30  Aligned_cols=73  Identities=16%  Similarity=0.226  Sum_probs=45.6

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcce
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNI   79 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   79 (288)
                      +|.| +|++|...+..+...|+ .|+++++++++++...+ +     +. .+++  |..+ +.++...+..  ...++|+
T Consensus        37 li~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~-----ga-~~~i--~~~~-~~~~~~~~~~--~~~g~d~  103 (172)
T d1h2ba2          37 AIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L-----GA-DHVV--DARR-DPVKQVMELT--RGRGVNV  103 (172)
T ss_dssp             EEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T-----TC-SEEE--ETTS-CHHHHHHHHT--TTCCEEE
T ss_pred             EEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c-----cc-ceee--cCcc-cHHHHHHHhh--CCCCceE
Confidence            3555 59999998888877886 67888888877654443 1     22 2233  4333 3344433321  1236999


Q ss_pred             EEEcccc
Q 023054           80 LINNAGI   86 (288)
Q Consensus        80 lv~~ag~   86 (288)
                      +|.++|.
T Consensus       104 vid~~g~  110 (172)
T d1h2ba2         104 AMDFVGS  110 (172)
T ss_dssp             EEESSCC
T ss_pred             EEEecCc
Confidence            9999984

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.83  E-value=0.016  Score=43.39  Aligned_cols=40  Identities=13%  Similarity=0.062  Sum_probs=34.1

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLIL   42 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~   42 (288)
                      |.|| |=+|..+|..++++|++|++.+++++.+++..+.+.
T Consensus         9 ViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           9 VLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             EECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             EECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            4565 779999999999999999999999988777666554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=94.64  E-value=0.032  Score=39.58  Aligned_cols=112  Identities=12%  Similarity=0.096  Sum_probs=63.8

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhC--CCCceEEE-EecCCChHHHHHHHHHHHhcCCCc
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKED--DTARVDTL-KLDLSSIASIKDFAQNFIALNLPL   77 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~~~i   77 (288)
                      |.|+ |.+|.++|..|+.++. ++++++.+++..+.....+....  .+....+. .-|..+              ...-
T Consensus         6 IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------~~~a   70 (142)
T d1uxja1           6 IIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------TANS   70 (142)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------GTTC
T ss_pred             EECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------hcCC
Confidence            6786 9999999999998875 89999998877665444443210  01222222 123222              1257


Q ss_pred             ceEEEccccCCCCCCCCCCcchhhhhhhhhHHHHHHHhhHHHHHHhhccCCCCCeEEEEcCcc
Q 023054           78 NILINNAGIMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIA  140 (288)
Q Consensus        78 d~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~g~iv~vsS~~  140 (288)
                      |++|.+||......    ..-.+.+..|.    .+++.+.+.+.+..    +++.++++|-+.
T Consensus        71 dvvvitag~~~~~~----~~r~dl~~~N~----~i~~~i~~~i~k~~----p~aivivvtNPv  121 (142)
T d1uxja1          71 DVIVVTSGAPRKPG----MSREDLIKVNA----DITRACISQAAPLS----PNAVIIMVNNPL  121 (142)
T ss_dssp             SEEEECCSCC-------------CHHHHH----HHHHHHHHHHGGGC----TTCEEEECSSSH
T ss_pred             CEEEEeeeccCCcC----cchhHHHhHHH----HHHHHHHHHHhccC----CCceEEEeCCch
Confidence            99999999764321    11233344443    46666666665532    146666666544

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.54  E-value=0.087  Score=38.02  Aligned_cols=64  Identities=11%  Similarity=-0.005  Sum_probs=41.9

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCC-----CCceEEEEecCCChHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDD-----TARVDTLKLDLSSIASIKDFAQ   68 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~   68 (288)
                      |.|-+|.++|++|+++|++|.+.+|+.++.+.+...-.....     ......+..-+.+.+.++.++.
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~   76 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYL   76 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHh
Confidence            568899999999999999999999998887665432111000     0113344445566666666554

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=94.47  E-value=0.087  Score=38.60  Aligned_cols=74  Identities=18%  Similarity=0.198  Sum_probs=47.0

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC-hHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id   78 (288)
                      +|.| .|+||...+..+-..|+ .|+++++++++++...+ +     +. ..++  |... .+......+..  ..+++|
T Consensus        33 lV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~-----Ga-~~~i--~~~~~~~~~~~~~~~~--~~~G~d  100 (174)
T d1e3ia2          33 AVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-L-----GA-TDCL--NPRELDKPVQDVITEL--TAGGVD  100 (174)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TC-SEEE--CGGGCSSCHHHHHHHH--HTSCBS
T ss_pred             EEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-h-----CC-Cccc--CCccchhhhhhhHhhh--hcCCCc
Confidence            4676 59999999999888998 68888998887654332 2     22 2222  2221 12233333332  235799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|-++|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999984

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.46  E-value=0.059  Score=39.52  Aligned_cols=74  Identities=16%  Similarity=0.142  Sum_probs=48.1

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChH-HHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIA-SIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id   78 (288)
                      +|.|+ ||+|...++.+...|+ +|+++++++++++...+ +     +. ..++  |..+.+ .+.+.....  ..+++|
T Consensus        32 lV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l-----Ga-~~~i--~~~~~d~~~~~~~~~~--~~~G~d   99 (174)
T d1p0fa2          32 AVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L-----GA-TECL--NPKDYDKPIYEVICEK--TNGGVD   99 (174)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T-----TC-SEEE--CGGGCSSCHHHHHHHH--TTSCBS
T ss_pred             EEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c-----CC-cEEE--cCCCchhHHHHHHHHh--cCCCCc
Confidence            47775 8999999999988997 79999999988765443 2     33 2233  333322 223322222  235799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|-+.|.
T Consensus       100 ~vid~~g~  107 (174)
T d1p0fa2         100 YAVECAGR  107 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCC
Confidence            99998874

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=94.44  E-value=0.037  Score=42.52  Aligned_cols=69  Identities=17%  Similarity=0.189  Sum_probs=46.2

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      +||..|.++|+++.++|++|.++.-....          . ++..+..+  .+.+.++....+...   ....|++|++|
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~-~p~~~~~~--~~~t~~~m~~~~~~~---~~~~D~~i~aA   93 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSL----------P-TPPFVKRV--DVMTALEMEAAVNAS---VQQQNIFIGCA   93 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCC----------C-CCTTEEEE--ECCSHHHHHHHHHHH---GGGCSEEEECC
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhccccc----------C-cccccccc--eehhhHHHHHHHHhh---hccceeEeeee
Confidence            47899999999999999999998654311          1 12344444  444555554444333   34679999999


Q ss_pred             ccCCC
Q 023054           85 GIMFC   89 (288)
Q Consensus        85 g~~~~   89 (288)
                      .+...
T Consensus        94 AvsDf   98 (223)
T d1u7za_          94 AVADY   98 (223)
T ss_dssp             BCCSE
T ss_pred             chhhh
Confidence            98643

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=94.20  E-value=0.094  Score=39.11  Aligned_cols=78  Identities=10%  Similarity=0.056  Sum_probs=57.2

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      +|-|+||...++...+ . +.+|+.++++++.++...+.+..-  +.++.++..++.+...+   ....  ....+|.++
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~~~~---~~~~--~~~~vdgIl  100 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREADFL---LKTL--GIEKVDGIL  100 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGHHHH---HHHT--TCSCEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhHHHH---HHHc--CCCCcceee
Confidence            3678888888888776 3 468999999999988777666443  56799999988875433   2211  135899999


Q ss_pred             EccccCC
Q 023054           82 NNAGIMF   88 (288)
Q Consensus        82 ~~ag~~~   88 (288)
                      ...|+..
T Consensus       101 ~DlGvSs  107 (192)
T d1m6ya2         101 MDLGVST  107 (192)
T ss_dssp             EECSCCH
T ss_pred             eccchhH
Confidence            9999854

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.19  E-value=0.017  Score=42.72  Aligned_cols=69  Identities=26%  Similarity=0.237  Sum_probs=47.3

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEE-ecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLK-LDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      |+||.+++++..|.+.| +|+++.|+.++.+++.+.+...........+. .|+.             ......|++||+
T Consensus        25 GaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~dliIn~   90 (177)
T d1nvta1          25 GAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLD-------------VDLDGVDIIINA   90 (177)
T ss_dssp             CCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTT-------------CCCTTCCEEEEC
T ss_pred             CCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhh-------------hccchhhhhccC
Confidence            56889999999998777 99999999999999888876543222211111 1111             112468999998


Q ss_pred             cccC
Q 023054           84 AGIM   87 (288)
Q Consensus        84 ag~~   87 (288)
                      ....
T Consensus        91 tp~g   94 (177)
T d1nvta1          91 TPIG   94 (177)
T ss_dssp             SCTT
T ss_pred             Cccc
Confidence            7654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.98  E-value=0.062  Score=38.84  Aligned_cols=36  Identities=14%  Similarity=0.124  Sum_probs=29.8

Q ss_pred             CcccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            1 MLAGGASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      ||.| +|+||...+..+...|++|+++++++++.+..
T Consensus        32 lv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          32 AIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             EEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            3554 69999998888888999999999999887654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.93  E-value=0.21  Score=40.45  Aligned_cols=73  Identities=12%  Similarity=0.080  Sum_probs=50.5

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      ++|+++.+    ++..|+ +|+.++.++..++.+.+.+...+-..+++++..|+.+      ....+.....+.|+||.+
T Consensus       155 g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~~~~fD~Vi~D  224 (324)
T d2as0a2         155 YTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKKGEKFDIVVLD  224 (324)
T ss_dssp             TTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHTTCCEEEEEEC
T ss_pred             cccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhccCCCCchhcC
Confidence            44555544    445676 7999999999999888887765444578888777642      233344445689999998


Q ss_pred             cccC
Q 023054           84 AGIM   87 (288)
Q Consensus        84 ag~~   87 (288)
                      +...
T Consensus       225 pP~~  228 (324)
T d2as0a2         225 PPAF  228 (324)
T ss_dssp             CCCS
T ss_pred             Cccc
Confidence            7654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.041  Score=46.62  Aligned_cols=57  Identities=18%  Similarity=0.218  Sum_probs=38.6

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCCC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLSS   59 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   59 (288)
                      |.|+ ||||.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+..++.+
T Consensus        42 vvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~~  118 (426)
T d1yovb1          42 VIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQD  118 (426)
T ss_dssp             EECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCGGG
T ss_pred             EECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccccc
Confidence            4554 8899999999999998 688886532                   2344455555555666666665555544

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=93.73  E-value=0.25  Score=38.80  Aligned_cols=75  Identities=17%  Similarity=0.190  Sum_probs=53.2

Q ss_pred             ccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEE
Q 023054            3 AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILIN   82 (288)
Q Consensus         3 tGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~   82 (288)
                      .+|+|-|+.++++   ...++|+.++.++..++-+.+.+....-..++.++..|+.+.         .....+++|++|.
T Consensus       118 g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~fDlIVs  185 (271)
T d1nv8a_         118 GTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFASIEMILS  185 (271)
T ss_dssp             SCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTTCCEEEE
T ss_pred             eeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCcccEEEE
Confidence            3444455555442   246799999999999998888887654455678888888753         2233468999999


Q ss_pred             ccccCCC
Q 023054           83 NAGIMFC   89 (288)
Q Consensus        83 ~ag~~~~   89 (288)
                      |.-+...
T Consensus       186 NPPYI~~  192 (271)
T d1nv8a_         186 NPPYVKS  192 (271)
T ss_dssp             CCCCBCG
T ss_pred             cccccCc
Confidence            9987643

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=93.69  E-value=0.046  Score=39.95  Aligned_cols=74  Identities=14%  Similarity=0.129  Sum_probs=46.4

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCC-hHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSS-IASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id   78 (288)
                      +|.|+ +|+|...++.+...|+ .|+++++++++.+. .+++     +.. +++  |..+ .+.+.+.+....  .+++|
T Consensus        33 lI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l-----Ga~-~~i--~~~~~~~~~~~~~~~~~--~~g~D  100 (176)
T d2fzwa2          33 AVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF-----GAT-ECI--NPQDFSKPIQEVLIEMT--DGGVD  100 (176)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH-----TCS-EEE--CGGGCSSCHHHHHHHHT--TSCBS
T ss_pred             EEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh-----CCc-EEE--eCCchhhHHHHHHHHHc--CCCCc
Confidence            46776 6999999988888996 67777888777654 3334     332 222  3221 233444444332  34799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2fzwa2         101 YSFECIGN  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EeeecCCC
Confidence            99999884

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.071  Score=42.58  Aligned_cols=26  Identities=15%  Similarity=0.139  Sum_probs=23.1

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCC
Q 023054            5 GASGIGLETARVLALRKAHVIIAARN   30 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~   30 (288)
                      +||..|.++|+.|..+|+.|+++.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecC
Confidence            57899999999999999999998643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.01  E-value=0.068  Score=38.20  Aligned_cols=37  Identities=14%  Similarity=0.245  Sum_probs=32.4

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLI   41 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~   41 (288)
                      |+|-+|.++++.|.+.|++|++.+|+.++.+++.++.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            6789999999999999999999999998877766544

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.93  E-value=1.7  Score=34.55  Aligned_cols=72  Identities=15%  Similarity=0.160  Sum_probs=49.8

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      ++||++.+    ++..+.+|+.++.++..++.+.+.+...+ -.++.++..|..+.      .+.+.......|.||.++
T Consensus       155 gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~~i~~d~~~~------~~~~~~~~~~fD~Vi~Dp  223 (318)
T d1wxxa2         155 YAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNG-LGNVRVLEANAFDL------LRRLEKEGERFDLVVLDP  223 (318)
T ss_dssp             TTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEESCHHHH------HHHHHHTTCCEEEEEECC
T ss_pred             CCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcC-CCCcceeeccHHHH------hhhhHhhhcCCCEEEEcC
Confidence            45555544    44456789999999999998888876653 24688888887542      233344456799999997


Q ss_pred             ccC
Q 023054           85 GIM   87 (288)
Q Consensus        85 g~~   87 (288)
                      ...
T Consensus       224 P~~  226 (318)
T d1wxxa2         224 PAF  226 (318)
T ss_dssp             CCS
T ss_pred             Ccc
Confidence            544

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.90  E-value=0.32  Score=35.64  Aligned_cols=61  Identities=16%  Similarity=0.091  Sum_probs=45.2

Q ss_pred             HHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054           14 ARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus        14 a~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      ...|++.+.+|+.++.++..++.+.+.+...+-..+++++.+|..          +.......+|.++.+.
T Consensus        48 s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~~~D~v~~~~  108 (186)
T d1l3ia_          48 TLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIPDIDIAVVGG  108 (186)
T ss_dssp             HHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSCCEEEEEESC
T ss_pred             cccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccCCcCEEEEeC
Confidence            455677788999999999999988888877644468999988742          2222345789998764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.54  E-value=0.088  Score=37.52  Aligned_cols=36  Identities=17%  Similarity=0.184  Sum_probs=30.6

Q ss_pred             CCChhHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHH
Q 023054            5 GASGIGLETARVLALRK-AHVIIAARNMAAANEARQL   40 (288)
Q Consensus         5 as~gIG~~ia~~La~~G-~~V~~~~r~~~~~~~~~~~   40 (288)
                      |+|-+|.++++.|.+.| ++|++++|++++.+++.++
T Consensus         7 G~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           7 GGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             CCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            45899999999999888 8999999999887766554

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=92.37  E-value=0.027  Score=42.53  Aligned_cols=33  Identities=21%  Similarity=0.284  Sum_probs=29.2

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      |.|.+|.++|+.|.+.|++|++.+.+.......
T Consensus        34 G~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          34 GLGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            578999999999999999999999998776543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=92.21  E-value=0.046  Score=39.41  Aligned_cols=31  Identities=16%  Similarity=0.014  Sum_probs=27.9

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAA   33 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~   33 (288)
                      |.|+ |.||..++..|++.|++|.+++|+++.
T Consensus         5 IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           5 VLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            6677 999999999999999999999998753

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=92.14  E-value=0.26  Score=35.61  Aligned_cols=74  Identities=16%  Similarity=0.177  Sum_probs=45.7

Q ss_pred             CcccCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHH-HHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIAS-IKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~~~~~~~id   78 (288)
                      +|.| .+|+|...+..++..|+ +|+++++++++++...+ +     +. -+++  |..+.+. +++......  .+++|
T Consensus        33 lI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~-----GA-d~~i--n~~~~~~~~~~~~~~~~--~~G~d  100 (175)
T d1cdoa2          33 AVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F-----GA-TDFV--NPNDHSEPISQVLSKMT--NGGVD  100 (175)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TC-CEEE--CGGGCSSCHHHHHHHHH--TSCBS
T ss_pred             EEEe-cCCccchHHHHHHHHhhchheeecchHHHHHHHHH-c-----CC-cEEE--cCCCcchhHHHHHHhhc--cCCcc
Confidence            3565 57788888888888876 68889999887765433 2     32 2333  3333222 233332221  24799


Q ss_pred             eEEEcccc
Q 023054           79 ILINNAGI   86 (288)
Q Consensus        79 ~lv~~ag~   86 (288)
                      +++-+.|.
T Consensus       101 ~vid~~G~  108 (175)
T d1cdoa2         101 FSLECVGN  108 (175)
T ss_dssp             EEEECSCC
T ss_pred             eeeeecCC
Confidence            99999984

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.86  E-value=0.67  Score=33.81  Aligned_cols=72  Identities=18%  Similarity=0.332  Sum_probs=51.3

Q ss_pred             cCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEE
Q 023054            4 GGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILIN   82 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~   82 (288)
                      .|||.+|.+    .+.+|+ +|+.++.+....+-+.+.+.......++.++..|+.+      +++.+.+...+.|+|+.
T Consensus        50 aGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~~~~~~fDlIfl  119 (182)
T d2fhpa1          50 SGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFYEEKLQFDLVLL  119 (182)
T ss_dssp             CTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHHHTTCCEEEEEE
T ss_pred             cccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhcccCCCcceEEe
Confidence            467777775    445787 6999999999888888877765444578888888753      34444444557999986


Q ss_pred             ccc
Q 023054           83 NAG   85 (288)
Q Consensus        83 ~ag   85 (288)
                      .+-
T Consensus       120 DPP  122 (182)
T d2fhpa1         120 DPP  122 (182)
T ss_dssp             CCC
T ss_pred             chh
Confidence            664

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.70  E-value=0.67  Score=32.60  Aligned_cols=68  Identities=16%  Similarity=0.258  Sum_probs=47.8

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      |||.+|.+    .+.+|+ +|+.++.+++..+.+.+.+.......++.+++.|..+      ++   .....+.|+++.+
T Consensus        24 GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~~~~~~fDiIf~D   90 (152)
T d2esra1          24 GSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---DCLTGRFDLVFLD   90 (152)
T ss_dssp             TTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---HHBCSCEEEEEEC
T ss_pred             ccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---cccccccceeEec
Confidence            45556654    455776 7999999999988888888766555678999888542      12   2334579999876


Q ss_pred             cc
Q 023054           84 AG   85 (288)
Q Consensus        84 ag   85 (288)
                      +.
T Consensus        91 PP   92 (152)
T d2esra1          91 PP   92 (152)
T ss_dssp             CS
T ss_pred             hh
Confidence            53

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.48  E-value=0.15  Score=35.22  Aligned_cols=71  Identities=14%  Similarity=0.251  Sum_probs=51.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEE-eCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIA-ARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |.|++|.+|+++++.+.++|+.++.. +++..          .......   +..|+|.++...+.++...+.  ++-+|
T Consensus         5 i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~----------~~~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~V   69 (128)
T d1vm6a3           5 IVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV----------EELDSPD---VVIDFSSPEALPKTVDLCKKY--RAGLV   69 (128)
T ss_dssp             EETTTSHHHHHHHHHHHHTTCEEEEEEETTEE----------EECSCCS---EEEECSCGGGHHHHHHHHHHH--TCEEE
T ss_pred             EECCCCHHHHHHHHHHhcCCCeEEEEECCCcH----------HHhccCC---EEEEecCHHHHHHHHHHHHhc--CCCEE
Confidence            78999999999999999999986653 43321          1101122   457999999999999988776  45678


Q ss_pred             EEccccC
Q 023054           81 INNAGIM   87 (288)
Q Consensus        81 v~~ag~~   87 (288)
                      +-..|..
T Consensus        70 iGTTG~~   76 (128)
T d1vm6a3          70 LGTTALK   76 (128)
T ss_dssp             ECCCSCC
T ss_pred             EEcCCCC
Confidence            8777754

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.47  E-value=0.49  Score=33.48  Aligned_cols=79  Identities=15%  Similarity=0.127  Sum_probs=49.8

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCC----CCceEEEEecCCChHHHHHHHHHHHhcCCCcceE
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDD----TARVDTLKLDLSSIASIKDFAQNFIALNLPLNIL   80 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   80 (288)
                      |.|-+|.++|++|.+.|+.+ +.+|+.++..+..++......    -.....+...+.+.+.+....+.+.....+-.++
T Consensus         7 GlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~~~~~i   85 (156)
T d2cvza2           7 GLGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLREGTYW   85 (156)
T ss_dssp             CCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEEE
T ss_pred             eHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccccccccc
Confidence            35789999999999988755 678888877766665432100    0123334445666677777777766654444555


Q ss_pred             EEcc
Q 023054           81 INNA   84 (288)
Q Consensus        81 v~~a   84 (288)
                      |.+.
T Consensus        86 id~s   89 (156)
T d2cvza2          86 VDAT   89 (156)
T ss_dssp             EECS
T ss_pred             cccc
Confidence            5444

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.44  E-value=0.38  Score=36.98  Aligned_cols=54  Identities=15%  Similarity=0.258  Sum_probs=39.2

Q ss_pred             CCChhHHHHHHHHHHCCC-EEEEEeCCh-------------------HHHHHHHHHHHhhCCCCceEEEEecCC
Q 023054            5 GASGIGLETARVLALRKA-HVIIAARNM-------------------AAANEARQLILKEDDTARVDTLKLDLS   58 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dl~   58 (288)
                      |.||+|..++..|++.|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+...+.
T Consensus        37 G~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~~  110 (247)
T d1jw9b_          37 GLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD  110 (247)
T ss_dssp             CCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhhh
Confidence            478999999999999998 788876432                   356666666777776666666554444

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.30  E-value=0.58  Score=37.35  Aligned_cols=73  Identities=15%  Similarity=0.011  Sum_probs=50.0

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      ++|+++.+    ++..|++|+.++.++..++.+.+.+...+- ..++.++..|+.+      +++...+...+.|+||.+
T Consensus       142 ~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~------~l~~~~~~~~~fD~IilD  211 (309)
T d2igta1         142 YTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK------FIQREERRGSTYDIILTD  211 (309)
T ss_dssp             TTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH------HHHHHHHHTCCBSEEEEC
T ss_pred             CCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH------hHHHHhhcCCCCCEEEEC
Confidence            45555444    456799999999999998888887765432 3468888877652      334444445679999998


Q ss_pred             cccC
Q 023054           84 AGIM   87 (288)
Q Consensus        84 ag~~   87 (288)
                      .-.+
T Consensus       212 PP~f  215 (309)
T d2igta1         212 PPKF  215 (309)
T ss_dssp             CCSE
T ss_pred             CCcc
Confidence            6544

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.10  E-value=0.28  Score=32.83  Aligned_cols=62  Identities=13%  Similarity=0.108  Sum_probs=46.9

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      |+|-+|+-++....+.|+++++.+.+++.-..          ...-.++..|+.|.+.+.+++...     .+|++.
T Consensus        18 GgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~~-----~~DviT   79 (111)
T d1kjqa2          18 GSGELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVELE-----KPHYIV   79 (111)
T ss_dssp             SCSHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             eCCHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHhh-----CCceEE
Confidence            47899999999999999999999987643110          011357778999999998887754     567775

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.06  E-value=0.14  Score=37.67  Aligned_cols=28  Identities=21%  Similarity=0.195  Sum_probs=24.8

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMA   32 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~   32 (288)
                      |+|..|.++|..|++.|.+|.+++|+.+
T Consensus         7 GaG~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           7 GAGAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             SCCHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            4688999999999999999999998644

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.42  E-value=0.56  Score=34.87  Aligned_cols=57  Identities=19%  Similarity=0.109  Sum_probs=42.9

Q ss_pred             HHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccccC
Q 023054           16 VLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGIM   87 (288)
Q Consensus        16 ~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~~   87 (288)
                      .++.+|+ +|+.++.++..++.+.+.+...  +.+..++..|+...             ..++|+||.|.-+.
T Consensus        63 ~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~-------------~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1          63 GALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF-------------NSRVDIVIMNPPFG  120 (201)
T ss_dssp             HHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC-------------CCCCSEEEECCCCS
T ss_pred             HHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh-------------CCcCcEEEEcCccc
Confidence            3456775 8999999999888887776654  56788888886542             35799999998653

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.34  E-value=0.35  Score=35.03  Aligned_cols=70  Identities=16%  Similarity=0.191  Sum_probs=43.3

Q ss_pred             cCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            4 GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      .|+|.+|.    +.+.+|++|+.++.++...+.+.+.++..+-..++....+|     .   +.........+.|+++.+
T Consensus        50 ~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d-----~---~~~~~~~~~~~fD~If~D  117 (171)
T d1ws6a1          50 AGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVE-----V---FLPEAKAQGERFTVAFMA  117 (171)
T ss_dssp             CSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHH-----H---HHHHHHHTTCCEEEEEEC
T ss_pred             cccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehh-----c---ccccccccCCccceeEEc
Confidence            34555553    45668999999999999988888877765333333332222     1   122233334579999987


Q ss_pred             cc
Q 023054           84 AG   85 (288)
Q Consensus        84 ag   85 (288)
                      +-
T Consensus       118 PP  119 (171)
T d1ws6a1         118 PP  119 (171)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.29  E-value=0.43  Score=33.13  Aligned_cols=75  Identities=11%  Similarity=0.176  Sum_probs=50.2

Q ss_pred             CcccCCChhHHHHHHHHHHC-CCEEEE-EeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcc
Q 023054            1 MLAGGASGIGLETARVLALR-KAHVII-AARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLN   78 (288)
Q Consensus         1 lItGas~gIG~~ia~~La~~-G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   78 (288)
                      .|.|++|.+|+++++.+.+. ++.++. +++... ..    .+...  +..   +..|+|.++.+.+.++.+.+.  ++-
T Consensus         3 ~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~----~~~~~--~~D---vvIDFS~p~~~~~~~~~~~~~--~~~   70 (135)
T d1yl7a1           3 GVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LS----LLTDG--NTE---VVIDFTHPDVVMGNLEFLIDN--GIH   70 (135)
T ss_dssp             EEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-TH----HHHTT--TCS---EEEECCCTTTHHHHHHHHHHT--TCE
T ss_pred             EEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hh----hhccc--cCC---EEEEcccHHHHHHHHHHHHhc--CCC
Confidence            37899999999999987764 566544 344321 11    11111  122   457999999999999888775  566


Q ss_pred             eEEEccccC
Q 023054           79 ILINNAGIM   87 (288)
Q Consensus        79 ~lv~~ag~~   87 (288)
                      +|+-..|..
T Consensus        71 ~ViGTTG~~   79 (135)
T d1yl7a1          71 AVVGTTGFT   79 (135)
T ss_dssp             EEECCCCCC
T ss_pred             EEEeccccc
Confidence            788667753

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=90.25  E-value=0.13  Score=35.34  Aligned_cols=64  Identities=17%  Similarity=0.163  Sum_probs=45.4

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      |.+.+|..+++.|.  |.+|+++..+++..+....        ..+.++..|.++++.++++-      ..+.+.+|.+.
T Consensus         7 G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~--------~~~~~i~Gd~~~~~~L~~a~------i~~A~~vi~~~   70 (129)
T d2fy8a1           7 GWSESTLECLRELR--GSEVFVLAEDENVRKKVLR--------SGANFVHGDPTRVSDLEKAN------VRGARAVIVNL   70 (129)
T ss_dssp             SCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH--------TTCEEEESCTTSHHHHHHTT------CTTCSEEEECC
T ss_pred             CCCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh--------cCccccccccCCHHHHHHhh------hhcCcEEEEec
Confidence            46889999999994  6678888888887654432        24778889999987666531      23567777544

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.10  E-value=3.6  Score=32.60  Aligned_cols=74  Identities=9%  Similarity=0.030  Sum_probs=50.0

Q ss_pred             cCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCC-CCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            4 GGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDD-TARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      .++||++.+    .+..|+ .|+.++.++..++...+.+...+- ..++.++..|+-+      .++...+...+.|+||
T Consensus       153 ~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~------~l~~~~~~~~~fD~Ii  222 (317)
T d2b78a2         153 SYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD------YFKYARRHHLTYDIII  222 (317)
T ss_dssp             CTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH------HHHHHHHTTCCEEEEE
T ss_pred             CCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHH------HHHHHHhhcCCCCEEE
Confidence            345555543    445677 699999999988888877765432 3568899888742      2334444556899999


Q ss_pred             EccccC
Q 023054           82 NNAGIM   87 (288)
Q Consensus        82 ~~ag~~   87 (288)
                      ..+-.+
T Consensus       223 ~DPP~f  228 (317)
T d2b78a2         223 IDPPSF  228 (317)
T ss_dssp             ECCCCC
T ss_pred             EcChhh
Confidence            986544

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=89.93  E-value=0.16  Score=37.72  Aligned_cols=34  Identities=21%  Similarity=0.193  Sum_probs=28.7

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEAR   38 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~   38 (288)
                      |+|-.|.++|..|++.|.+|.+++|+++..+...
T Consensus        14 GaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2          14 GSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             CCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            4566899999999999999999999987766544

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=89.43  E-value=0.34  Score=37.07  Aligned_cols=60  Identities=10%  Similarity=0.070  Sum_probs=45.4

Q ss_pred             HHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccc
Q 023054           13 TARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        13 ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      ++..|+++|.+|+.++.++..++.+.+.+...  +.++.++..|+.+..           ..++.|++++..+
T Consensus        51 ~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-----------~~~~fD~i~~~~~  110 (246)
T d1y8ca_          51 LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-----------INRKFDLITCCLD  110 (246)
T ss_dssp             THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-----------CSCCEEEEEECTT
T ss_pred             HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-----------ccccccccceeee
Confidence            57789999999999999999888776665554  457889988887642           1247899886544

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=89.42  E-value=0.87  Score=35.62  Aligned_cols=71  Identities=17%  Similarity=0.143  Sum_probs=52.2

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      |||-||.+++..+  ...+|+.++.++..++-+.+.+...+ -.++.+++.|+.+.-           ...++|++|.|.
T Consensus       118 GSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~-~~~v~~~~~d~~~~~-----------~~~~fDlIvsNP  183 (274)
T d2b3ta1         118 GTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA-IKNIHILQSDWFSAL-----------AGQQFAMIVSNP  183 (274)
T ss_dssp             TTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT-CCSEEEECCSTTGGG-----------TTCCEEEEEECC
T ss_pred             hhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC-cccceeeeccccccc-----------CCCceeEEEecc
Confidence            5666777766654  34699999999999888888877653 246999999987531           124799999998


Q ss_pred             ccCCC
Q 023054           85 GIMFC   89 (288)
Q Consensus        85 g~~~~   89 (288)
                      -+...
T Consensus       184 PYi~~  188 (274)
T d2b3ta1         184 PYIDE  188 (274)
T ss_dssp             CCBCT
T ss_pred             hhhhh
Confidence            87643

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.21  E-value=0.84  Score=33.85  Aligned_cols=61  Identities=11%  Similarity=0.029  Sum_probs=44.8

Q ss_pred             HHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccc
Q 023054           13 TARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus        13 ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      ++..|++.|++|+.++.++..++.+.+.+...  +.++.++..|..+..          ......|+|+.+..
T Consensus        51 ~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~----------~~~~~fD~I~~~~~  111 (226)
T d1ve3a1          51 FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS----------FEDKTFDYVIFIDS  111 (226)
T ss_dssp             HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC----------SCTTCEEEEEEESC
T ss_pred             hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc----------ccCcCceEEEEecc
Confidence            46788899999999999998888777766655  345777888877632          11246899887654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=89.10  E-value=1.9  Score=30.43  Aligned_cols=82  Identities=15%  Similarity=0.120  Sum_probs=48.8

Q ss_pred             cccCCChhHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHh-h-C------CCCceEEEEecCCChHHHHHHHHHHH
Q 023054            2 LAGGASGIGLETARVLALRKA--HVIIAARNMAAANEARQLILK-E-D------DTARVDTLKLDLSSIASIKDFAQNFI   71 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~-~-~------~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (288)
                      |.| .|-||..+|+.|.+.|+  +|+..+++++..+...+.-.. . .      ......++.+ .+..+.+.++++++.
T Consensus         6 IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl~~l~   83 (171)
T d2g5ca2           6 IVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIAKKLS   83 (171)
T ss_dssp             EES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHHHHHH
T ss_pred             EEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhhhhhh
Confidence            455 58999999999999996  788899998877765543110 0 0      0001112111 223566777777777


Q ss_pred             hcCCCcceEEEccc
Q 023054           72 ALNLPLNILINNAG   85 (288)
Q Consensus        72 ~~~~~id~lv~~ag   85 (288)
                      .....=.+++..++
T Consensus        84 ~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          84 YILSEDATVTDQGS   97 (171)
T ss_dssp             HHSCTTCEEEECCS
T ss_pred             cccccccccccccc
Confidence            65443344444444

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.97  E-value=0.22  Score=35.26  Aligned_cols=33  Identities=15%  Similarity=0.157  Sum_probs=27.7

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      |.|-+|.++++.|.++|++|++.+++..+....
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            568999999999999999999998877655443

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=88.30  E-value=1.7  Score=31.09  Aligned_cols=69  Identities=23%  Similarity=0.173  Sum_probs=48.9

Q ss_pred             CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccc
Q 023054            6 ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus         6 s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      .|=.|.+.++...+.|+.|.+.+.+.++++++.....     .++.+.   ..+.+.+.+.+.       .-|+||.++-
T Consensus        40 aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~-----~~~~~~---~~~~~~l~~~~~-------~aDivI~aal  104 (168)
T d1pjca1          40 GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVELL---YSNSAEIETAVA-------EADLLIGAVL  104 (168)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEEE---ECCHHHHHHHHH-------TCSEEEECCC
T ss_pred             CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc-----ccceee---hhhhhhHHHhhc-------cCcEEEEeee
Confidence            4567899999999999999999999999887766553     233332   344444444433       5699999987


Q ss_pred             cCCC
Q 023054           86 IMFC   89 (288)
Q Consensus        86 ~~~~   89 (288)
                      +...
T Consensus       105 ipG~  108 (168)
T d1pjca1         105 VPGR  108 (168)
T ss_dssp             CTTS
T ss_pred             cCCc
Confidence            6543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.30  E-value=0.82  Score=29.06  Aligned_cols=63  Identities=11%  Similarity=0.029  Sum_probs=40.5

Q ss_pred             CChhHH-HHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            6 ASGIGL-ETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         6 s~gIG~-~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      -+|+|. ++|+.|.++|+.|...+++....   .+.++..  +.++. ..-|..+              ....|.||...
T Consensus         9 IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~---t~~L~~~--Gi~i~-~gh~~~~--------------i~~~d~vV~Ss   68 (89)
T d1j6ua1           9 IGGIGMSAVALHEFSNGNDVYGSNIEETER---TAYLRKL--GIPIF-VPHSADN--------------WYDPDLVIKTP   68 (89)
T ss_dssp             TTSHHHHHHHHHHHHTTCEEEEECSSCCHH---HHHHHHT--TCCEE-SSCCTTS--------------CCCCSEEEECT
T ss_pred             ECHHHHHHHHHHHHhCCCeEEEEeCCCChh---HHHHHHC--CCeEE-eeecccc--------------cCCCCEEEEec
Confidence            466776 67999999999999999876432   2334444  33322 1223222              13689999999


Q ss_pred             ccCC
Q 023054           85 GIMF   88 (288)
Q Consensus        85 g~~~   88 (288)
                      ++..
T Consensus        69 AI~~   72 (89)
T d1j6ua1          69 AVRD   72 (89)
T ss_dssp             TCCT
T ss_pred             CcCC
Confidence            8753

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.92  E-value=0.31  Score=36.30  Aligned_cols=33  Identities=21%  Similarity=0.150  Sum_probs=29.1

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEA   37 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~   37 (288)
                      |.|-+|..+|..|+++|++|++++.+++..+.+
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            678999999999999999999999998765543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=87.12  E-value=0.17  Score=32.66  Aligned_cols=30  Identities=17%  Similarity=0.176  Sum_probs=25.2

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMA   32 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~   32 (288)
                      |.|. |.-|.++|+.|.++|++|++.+.+..
T Consensus        10 ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1          10 IIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             EECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             EEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            4555 67799999999999999999998654

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.79  E-value=0.73  Score=35.01  Aligned_cols=63  Identities=19%  Similarity=0.161  Sum_probs=46.4

Q ss_pred             hhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcc
Q 023054            8 GIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNA   84 (288)
Q Consensus         8 gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~a   84 (288)
                      |-|.. +..|+++|++|+.++.++.-++.+.+.+...  +.++.++..|+.+..           ..+..|.|+..-
T Consensus        51 GtG~~-~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~-----------~~~~fD~I~~~~  113 (251)
T d1wzna1          51 GTGIP-TLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA-----------FKNEFDAVTMFF  113 (251)
T ss_dssp             TTCHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC-----------CCSCEEEEEECS
T ss_pred             CCCcc-chhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc-----------cccccchHhhhh
Confidence            33444 6678999999999999998888777776654  447899999987643           123689887753

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=86.10  E-value=0.71  Score=33.39  Aligned_cols=54  Identities=15%  Similarity=0.031  Sum_probs=38.8

Q ss_pred             ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhC-----------CCCceEEEEecCCChH
Q 023054            7 SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKED-----------DTARVDTLKLDLSSIA   61 (288)
Q Consensus         7 ~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Dl~~~~   61 (288)
                      .|.|+ .+..|+++|++|+.++.++...+.+.+......           .+..+.++.+|..+..
T Consensus        29 CG~G~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~   93 (201)
T d1pjza_          29 CGKSQ-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT   93 (201)
T ss_dssp             TCCSH-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred             CcCCH-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc
Confidence            45566 577999999999999999998888777664321           1234567777877644

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=85.77  E-value=0.1  Score=37.00  Aligned_cols=37  Identities=16%  Similarity=0.099  Sum_probs=27.0

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAANEARQLI   41 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~   41 (288)
                      |+|-+|+++++.|.+.+..+.+.+|+.++++++.++.
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            5788999999988664444568999999988877654

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.60  E-value=0.51  Score=40.78  Aligned_cols=27  Identities=22%  Similarity=0.244  Sum_probs=22.5

Q ss_pred             cccCCChhHHHHHHHHHHCCC-EEEEEeC
Q 023054            2 LAGGASGIGLETARVLALRKA-HVIIAAR   29 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~-~V~~~~r   29 (288)
                      |.|+ ||+|.++++.|+..|. ++++++.
T Consensus        30 vvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          30 LINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             ECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             EECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            5564 8999999999999997 6888754

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=85.30  E-value=1.5  Score=33.82  Aligned_cols=64  Identities=17%  Similarity=0.148  Sum_probs=43.7

Q ss_pred             cCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEc
Q 023054            4 GGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINN   83 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~   83 (288)
                      |.++|+   ++..+++.|++|+.++.++...+.+.+.....  +.+..++..|+.+          .. ..++.|+++.|
T Consensus       128 GcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~~----------~~-~~~~fD~V~an  191 (254)
T d2nxca1         128 GTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEA----------AL-PFGPFDLLVAN  191 (254)
T ss_dssp             TCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHHH----------HG-GGCCEEEEEEE
T ss_pred             ccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEeccccc----------cc-cccccchhhhc
Confidence            455553   34567788999999999999988888777655  3456677666421          11 12578999876

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=85.22  E-value=0.77  Score=34.01  Aligned_cols=54  Identities=22%  Similarity=0.097  Sum_probs=38.8

Q ss_pred             HHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcccc
Q 023054           14 ARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGI   86 (288)
Q Consensus        14 a~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~   86 (288)
                      +..++..|+ +|+.++.++...+.+.+.      ..++.++.+|+.+.             .+++|+||.|.-+
T Consensus        63 ~i~a~~~ga~~V~~vDid~~a~~~ar~N------~~~~~~~~~D~~~l-------------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_          63 ACGSYLLGAESVTAFDIDPDAIETAKRN------CGGVNFMVADVSEI-------------SGKYDTWIMNPPF  117 (197)
T ss_dssp             HHHHHHTTBSEEEEEESCHHHHHHHHHH------CTTSEEEECCGGGC-------------CCCEEEEEECCCC
T ss_pred             HHHHHHcCCCcccccccCHHHHHHHHHc------cccccEEEEehhhc-------------CCcceEEEeCccc
Confidence            345666776 699999998876655443      24578899998642             3589999999764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.80  E-value=1.1  Score=30.08  Aligned_cols=27  Identities=26%  Similarity=0.282  Sum_probs=24.3

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCCh
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNM   31 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~   31 (288)
                      |+|-||.++|..|++.|.+|.++.+++
T Consensus        30 G~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          30 GGGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCchHHHHHHHHHhhCcceeEEEecc
Confidence            567899999999999999999998764

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=84.78  E-value=3.2  Score=29.88  Aligned_cols=68  Identities=15%  Similarity=0.184  Sum_probs=46.5

Q ss_pred             cCCChhHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEE
Q 023054            4 GGASGIGLETARVLALRKA-HVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILIN   82 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~   82 (288)
                      .|||.+|.+    .+.+|+ +|+.+..+....+.+.+.+.... ..++.++..|+.         +.+.......|+++.
T Consensus        52 aGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~~-~~~~~ii~~d~~---------~~l~~~~~~fDlIf~  117 (183)
T d2fpoa1          52 AGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATLK-AGNARVVNSNAM---------SFLAQKGTPHNIVFV  117 (183)
T ss_dssp             CTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHTT-CCSEEEECSCHH---------HHHSSCCCCEEEEEE
T ss_pred             ccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhcc-ccceeeeeeccc---------ccccccccccCEEEE
Confidence            456666655    445787 69999999999888888876643 356777777632         223334457899998


Q ss_pred             ccc
Q 023054           83 NAG   85 (288)
Q Consensus        83 ~ag   85 (288)
                      ..-
T Consensus       118 DPP  120 (183)
T d2fpoa1         118 DPP  120 (183)
T ss_dssp             CCS
T ss_pred             cCc
Confidence            754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.64  E-value=1.9  Score=28.52  Aligned_cols=29  Identities=24%  Similarity=0.142  Sum_probs=25.4

Q ss_pred             cCCChhHHHHHHHHHHCCCEEEEEeCChH
Q 023054            4 GGASGIGLETARVLALRKAHVIIAARNMA   32 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~~V~~~~r~~~   32 (288)
                      =|+|-||.++|..|++.|.+|.++.|.+.
T Consensus        28 iGgG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          28 IGGGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             ECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             ECCCccceeeeeeecccccEEEEEEecce
Confidence            36789999999999999999999987653

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.63  E-value=1.4  Score=33.06  Aligned_cols=73  Identities=19%  Similarity=0.166  Sum_probs=53.2

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEE
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILI   81 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv   81 (288)
                      ..|+++|--.++..+|+  |.+|+.+.++++-.+...+.+.+.+ -.++.++..|..+-          ....++.|.++
T Consensus        84 eIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g-~~nv~~~~gd~~~g----------~~~~~pfD~Ii  150 (215)
T d1jg1a_          84 EVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG-VKNVHVILGDGSKG----------FPPKAPYDVII  150 (215)
T ss_dssp             EECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGC----------CGGGCCEEEEE
T ss_pred             EecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC-CceeEEEECccccC----------CcccCcceeEE
Confidence            46777777777777776  5679999999888777777776653 47799999997641          11235799999


Q ss_pred             EccccC
Q 023054           82 NNAGIM   87 (288)
Q Consensus        82 ~~ag~~   87 (288)
                      .+++..
T Consensus       151 v~~a~~  156 (215)
T d1jg1a_         151 VTAGAP  156 (215)
T ss_dssp             ECSBBS
T ss_pred             eecccc
Confidence            888764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.62  E-value=1.6  Score=31.83  Aligned_cols=67  Identities=16%  Similarity=0.209  Sum_probs=47.8

Q ss_pred             ChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcccc
Q 023054            7 SGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGI   86 (288)
Q Consensus         7 ~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~   86 (288)
                      .|.|+. +..|+++|++|+.++.++..++.+........ -.++.+...|+.+..           ..+..|+|+.+.-+
T Consensus        39 cG~G~~-~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~~d~~~~~-----------~~~~fD~I~~~~~~  105 (198)
T d2i6ga1          39 CGNGRN-SLYLAANGYDVTAWDKNPASMANLERIKAAEG-LDNLQTDLVDLNTLT-----------FDGEYDFILSTVVM  105 (198)
T ss_dssp             CTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEECCTTTCC-----------CCCCEEEEEEESCG
T ss_pred             CCCCHH-HHHHHHHhhhhccccCcHHHHHHHHHHhhhcc-ccchhhhheeccccc-----------ccccccEEEEeeee
Confidence            356664 67889999999999999998887776665542 245788888887643           11368988866543

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=84.33  E-value=1.7  Score=31.49  Aligned_cols=73  Identities=12%  Similarity=0.094  Sum_probs=48.2

Q ss_pred             CChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEccc
Q 023054            6 ASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAG   85 (288)
Q Consensus         6 s~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag   85 (288)
                      |-|-|-+ .+.+++++.+|+.++|++...+.... +   . ..++.+++.+.++.+..   +...  ..+.+|.++..-|
T Consensus        26 T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~-~---~-~~~~~~~~~~f~~~~~~---l~~~--~~~~vdgIl~DLG   94 (182)
T d1wg8a2          26 TLGGAGH-ARGILERGGRVIGLDQDPEAVARAKG-L---H-LPGLTVVQGNFRHLKRH---LAAL--GVERVDGILADLG   94 (182)
T ss_dssp             TCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHH-T---C-CTTEEEEESCGGGHHHH---HHHT--TCSCEEEEEEECS
T ss_pred             CCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhh-c---c-ccceeEeehHHHHHHHH---HHHc--CCCccCEEEEEcc
Confidence            3333444 45556667899999999987765433 1   1 45789999888874433   2222  1357999999999


Q ss_pred             cCCC
Q 023054           86 IMFC   89 (288)
Q Consensus        86 ~~~~   89 (288)
                      +...
T Consensus        95 vSs~   98 (182)
T d1wg8a2          95 VSSF   98 (182)
T ss_dssp             CCHH
T ss_pred             CCHH
Confidence            8644

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.93  E-value=1  Score=32.11  Aligned_cols=30  Identities=30%  Similarity=0.264  Sum_probs=27.2

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCChHHH
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNMAAA   34 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~~~~   34 (288)
                      |.|-||+.+|+.|...|++|+++..++-+.
T Consensus        31 GyG~iG~g~A~~~rg~G~~V~v~e~dp~~a   60 (163)
T d1li4a1          31 GYGDVGKGCAQALRGFGARVIITEIDPINA   60 (163)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             ccccccHHHHHHHHhCCCeeEeeecccchh
Confidence            678999999999999999999999998553

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.79  E-value=2  Score=28.80  Aligned_cols=27  Identities=26%  Similarity=0.297  Sum_probs=24.1

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCCh
Q 023054            5 GASGIGLETARVLALRKAHVIIAARNM   31 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~~   31 (288)
                      |+|-||.++|..|++.|.+|.++.|.+
T Consensus        29 GgG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          29 GAGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCccHHHHHHHHhcCCcEEEEEeecc
Confidence            456899999999999999999998864

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=82.39  E-value=1.7  Score=28.92  Aligned_cols=29  Identities=24%  Similarity=0.155  Sum_probs=25.2

Q ss_pred             ccCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 023054            3 AGGASGIGLETARVLALRKAHVIIAARNM   31 (288)
Q Consensus         3 tGas~gIG~~ia~~La~~G~~V~~~~r~~   31 (288)
                      .=|+|-||.++|..|++.|.+|.++.|..
T Consensus        27 IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          27 IVGSGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             EECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             EECCchHHHHHHHHHHhccccceeeehhc
Confidence            33678999999999999999999998854

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=82.38  E-value=0.52  Score=33.20  Aligned_cols=29  Identities=17%  Similarity=0.004  Sum_probs=25.6

Q ss_pred             cCCChhHHHHHHHHHHCCCEEEEEeCChH
Q 023054            4 GGASGIGLETARVLALRKAHVIIAARNMA   32 (288)
Q Consensus         4 Gas~gIG~~ia~~La~~G~~V~~~~r~~~   32 (288)
                      .+++.||.++|..|+++|.+|.++.+.+.
T Consensus        47 ~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          47 ADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             cCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            36689999999999999999999988653

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.95  E-value=2.1  Score=31.75  Aligned_cols=73  Identities=14%  Similarity=0.097  Sum_probs=48.3

Q ss_pred             ccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEE
Q 023054            3 AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILIN   82 (288)
Q Consensus         3 tGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~   82 (288)
                      .|+++|--.++..++.....+|+.++.+++..+...+.+.... -.++.++..|..+.-          ...+..|.++.
T Consensus        82 iG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~~----------~~~~~fD~I~~  150 (213)
T d1dl5a1          82 IGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYGV----------PEFSPYDVIFV  150 (213)
T ss_dssp             ECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCC----------GGGCCEEEEEE
T ss_pred             ecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHcc----------ccccchhhhhh
Confidence            4555555444444455456689999999999888888776543 456777777765311          11246899998


Q ss_pred             cccc
Q 023054           83 NAGI   86 (288)
Q Consensus        83 ~ag~   86 (288)
                      +++.
T Consensus       151 ~~~~  154 (213)
T d1dl5a1         151 TVGV  154 (213)
T ss_dssp             CSBB
T ss_pred             hccH
Confidence            8765

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.95  E-value=0.45  Score=32.18  Aligned_cols=30  Identities=37%  Similarity=0.318  Sum_probs=26.0

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNM   31 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~   31 (288)
                      +.-|+|.+|.++|..|++.|.+|.++.+++
T Consensus        36 vIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          36 IIIGGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             EEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             EEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence            345689999999999999999999998764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=81.73  E-value=1  Score=34.18  Aligned_cols=39  Identities=18%  Similarity=0.181  Sum_probs=32.8

Q ss_pred             ccCCChhHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Q 023054            3 AGGASGIGLETARVLALRKAHVIIAARNMAAANEARQLI   41 (288)
Q Consensus         3 tGas~gIG~~ia~~La~~G~~V~~~~r~~~~~~~~~~~~   41 (288)
                      .=|.|.+|.++|+.|.+.|++|++++.+....+......
T Consensus        44 IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          44 VQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             EECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             EECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            346789999999999999999999999988777665543

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.16  E-value=1.8  Score=30.69  Aligned_cols=73  Identities=12%  Similarity=0.024  Sum_probs=38.5

Q ss_pred             cccCCChhHHHHHH-HHHH-C----CCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCC
Q 023054            2 LAGGASGIGLETAR-VLAL-R----KAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNL   75 (288)
Q Consensus         2 ItGas~gIG~~ia~-~La~-~----G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (288)
                      |.||++ +|...+. .|++ .    +.+|++.+.++++++...+...... ....... .- ++.   .+   .+    .
T Consensus         5 iIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~-~~~~~~~-~t-~~~---~~---~l----~   70 (162)
T d1up7a1           5 VIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLV-KDRFKVL-IS-DTF---EG---AV----V   70 (162)
T ss_dssp             EETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHH-TTSSEEE-EC-SSH---HH---HH----T
T ss_pred             EECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhh-ccCceEE-Ee-cCc---cc---cc----C
Confidence            567654 4544442 2222 2    3589999999998775544333221 1222221 11 221   11   11    2


Q ss_pred             CcceEEEccccCC
Q 023054           76 PLNILINNAGIMF   88 (288)
Q Consensus        76 ~id~lv~~ag~~~   88 (288)
                      .-|++|..+|...
T Consensus        71 ~aDvVVita~~~~   83 (162)
T d1up7a1          71 DAKYVIFQFRPGG   83 (162)
T ss_dssp             TCSEEEECCCTTH
T ss_pred             CCCEEEEecccCC
Confidence            6799999999753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=81.07  E-value=0.64  Score=31.39  Aligned_cols=31  Identities=29%  Similarity=0.282  Sum_probs=26.7

Q ss_pred             cccCCChhHHHHHHHHHHCCCEEEEEeCChH
Q 023054            2 LAGGASGIGLETARVLALRKAHVIIAARNMA   32 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~G~~V~~~~r~~~   32 (288)
                      +.-|+|.+|.++|..|+++|.+|.++.+.+.
T Consensus        34 vIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          34 LIVGGGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             EEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             EEECcchhHHHHHHHhhcccceEEEEeeccc
Confidence            4457899999999999999999999988653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=80.78  E-value=1.9  Score=28.51  Aligned_cols=29  Identities=24%  Similarity=0.095  Sum_probs=25.6

Q ss_pred             ccCCChhHHHHHHHHHHCCCEEEEEeCCh
Q 023054            3 AGGASGIGLETARVLALRKAHVIIAARNM   31 (288)
Q Consensus         3 tGas~gIG~~ia~~La~~G~~V~~~~r~~   31 (288)
                      .=|+|-+|.++|..|++.|.+|.++.|.+
T Consensus        26 IiGgG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          26 VVGAGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             EECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             EECCChhhHHHHHHhhccccEEEEEeecc
Confidence            34678999999999999999999998864

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=80.42  E-value=1.1  Score=32.16  Aligned_cols=74  Identities=8%  Similarity=0.058  Sum_probs=38.7

Q ss_pred             cccCCChhHHHHHHHHHHC-----CCEEEEEeCChHHHHHHHHHHHh---hCCCCceEEEEecCCChHHHHHHHHHHHhc
Q 023054            2 LAGGASGIGLETARVLALR-----KAHVIIAARNMAAANEARQLILK---EDDTARVDTLKLDLSSIASIKDFAQNFIAL   73 (288)
Q Consensus         2 ItGas~gIG~~ia~~La~~-----G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (288)
                      |.||++--...++..|+.+     +.+|++++.++++++.....+..   .. +........  +|   .++.+      
T Consensus         8 iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~d---~~eal------   75 (167)
T d1u8xx1           8 IAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREK-APDIEFAAT--TD---PEEAF------   75 (167)
T ss_dssp             EECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHH-CTTSEEEEE--SC---HHHHH------
T ss_pred             EECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHh-CCCcceEec--CC---hhhcc------
Confidence            5676553222333444432     23799999999988754444332   21 122222211  12   11112      


Q ss_pred             CCCcceEEEccccCC
Q 023054           74 NLPLNILINNAGIMF   88 (288)
Q Consensus        74 ~~~id~lv~~ag~~~   88 (288)
                       ..-|+||+.+|...
T Consensus        76 -~~AD~Vvitag~~~   89 (167)
T d1u8xx1          76 -TDVDFVMAHIRVGK   89 (167)
T ss_dssp             -SSCSEEEECCCTTH
T ss_pred             -CCCCEEEECCCcCC
Confidence             26799999999753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.19  E-value=2.3  Score=28.42  Aligned_cols=26  Identities=38%  Similarity=0.360  Sum_probs=23.8

Q ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCC
Q 023054            5 GASGIGLETARVLALRKAHVIIAARN   30 (288)
Q Consensus         5 as~gIG~~ia~~La~~G~~V~~~~r~   30 (288)
                      |+|-||.++|..|.+.|.+|.++.|+
T Consensus        27 GgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          27 GASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCccHHHHHHHHhhcCCeEEEEEec
Confidence            57899999999999999999999875

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=80.06  E-value=2.7  Score=31.11  Aligned_cols=62  Identities=15%  Similarity=0.097  Sum_probs=44.9

Q ss_pred             HHHHHHCCCEEEEEeCChHHHHHHHHHHHhhCCCCceEEEEecCCChHHHHHHHHHHHhcCCCcceEEEcccc
Q 023054           14 ARVLALRKAHVIIAARNMAAANEARQLILKEDDTARVDTLKLDLSSIASIKDFAQNFIALNLPLNILINNAGI   86 (288)
Q Consensus        14 a~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~lv~~ag~   86 (288)
                      +..|+++|++|+.++.+++..+.+.+.+.... ..++.++..|..+..     +     ..+..|+|+.+..+
T Consensus        30 ~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~~l~-----~-----~~~~fD~v~~~~~l   91 (231)
T d1vl5a_          30 ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAEQMP-----F-----TDERFHIVTCRIAA   91 (231)
T ss_dssp             HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-CCC-----S-----CTTCEEEEEEESCG
T ss_pred             HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-ccccccccccccccc-----c-----cccccccccccccc
Confidence            46788899999999999988877666655543 467899999988742     0     12468999877654