Citrus Sinensis ID: 023092


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
MGMQTEARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQSDPY
ccHHHHHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccHHHHccHHHHHHHHHHHccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccc
cccHHHHHHHHHHHccHHHHHcccHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccc
MGMQTEARVGVVVeggqrglssgngsvsvdKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAhrlpyssvnfYAYEHYKKLLHAIPvvesqgenmssDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGatllgvgpsiAISFSVYETLRSFWQsrrqndspvLVSLACGslsgiasstetEDVGLALHQVFNQSDPY
MGMQTEARVGVVveggqrglssgngSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQvfnqsdpy
MGMQTEArvgvvveggqrgLSSGNGSVSVDKITLqqqqkqmlqnqsqIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQSDPY
***********************************************IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIA*******VGLALH*********
*****EARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQG***********SIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQ*FNQ****
********VGVVVEGGQRGLSSGNGSVSVDKITLQ**********SQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQSDPY
*GMQTEARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQ****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGMQTEARVGVVVEGGQRGLSSGNGSVSVDKITLQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQSDPY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query287 2.2.26 [Sep-21-2011]
Q54MZ4434 Mitochondrial substrate c yes no 0.815 0.539 0.367 3e-36
Q6NUK1477 Calcium-binding mitochond yes no 0.682 0.410 0.408 1e-35
Q8BMD8475 Calcium-binding mitochond yes no 0.672 0.406 0.406 5e-34
A5PJZ1477 Calcium-binding mitochond yes no 0.682 0.410 0.403 7e-34
O18757475 Calcium-binding mitochond yes no 0.675 0.408 0.399 1e-32
O04619352 Mitochondrial adenine nuc no no 0.735 0.599 0.372 4e-32
Q5XHA0473 Calcium-binding mitochond no no 0.682 0.414 0.369 3e-31
Q7T0U6473 Calcium-binding mitochond N/A no 0.682 0.414 0.364 5e-31
Q7ZYD5514 Calcium-binding mitochond N/A no 0.752 0.420 0.351 6e-31
Q7ZY36473 Calcium-binding mitochond N/A no 0.682 0.414 0.359 1e-30
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function desciption
 Score =  152 bits (383), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 11/245 (4%)

Query: 34  LQQQQKQMLQNQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMH--SDTATLR 91
           LQ   K ++   + + +   LL+GGVAGA+S+TCT+PL RL IL QV  M+   +    +
Sbjct: 122 LQYSTKPIVHAPADVPSWKLLLSGGVAGAVSRTCTSPLERLKILNQVGHMNLEQNAPKYK 181

Query: 92  KASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGE 151
              I +    + + EGF  F+KGN   +    PYS++ F +YE YK  L       +  +
Sbjct: 182 GRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLL------NNND 235

Query: 152 NMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIW 211
                 + +   GG AG+T+   TYPLDL+R+RL  Q     Y GI    + I R+EG+ 
Sbjct: 236 QTHLTTYENLFVGGAAGVTSLLCTYPLDLIRSRLTVQVFGNKYNGIADTCKMIIREEGVA 295

Query: 212 GLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLV-SLACGSLSGIASSTET 270
           GLYKGL A+ LGV P +AI+F+ YE L+  +  +  + +P +V SL  G++SG  + T T
Sbjct: 296 GLYKGLFASALGVAPYVAINFTTYENLKKTFIPK--DTTPTVVQSLTFGAISGATAQTLT 353

Query: 271 EDVGL 275
             + L
Sbjct: 354 YPIDL 358




Calcium-dependent mitochondrial solute carrier. Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane.
Dictyostelium discoideum (taxid: 44689)
>sp|Q6NUK1|SCMC1_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2 Back     alignment and function description
>sp|Q8BMD8|SCMC1_MOUSE Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|A5PJZ1|SCMC1_BOVIN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1 Back     alignment and function description
>sp|O18757|SCMC1_RABIT Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1 Back     alignment and function description
>sp|O04619|ADNT1_ARATH Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1 Back     alignment and function description
>sp|Q7T0U6|SCM1B_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1 Back     alignment and function description
>sp|Q7ZYD5|SCMC2_XENLA Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZY36|SCM1A_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-a PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query287
296086165277 unnamed protein product [Vitis vinifera] 0.958 0.992 0.798 1e-120
225449356346 PREDICTED: mitochondrial substrate carri 0.947 0.786 0.8 1e-118
449464462348 PREDICTED: mitochondrial substrate carri 0.951 0.784 0.770 1e-112
224109442337 predicted protein [Populus trichocarpa] 0.909 0.774 0.775 1e-111
449448592349 PREDICTED: mitochondrial substrate carri 0.947 0.779 0.747 1e-111
449516015349 PREDICTED: mitochondrial substrate carri 0.947 0.779 0.743 1e-110
118481007267 unknown [Populus trichocarpa] 0.919 0.988 0.759 1e-110
224101051337 predicted protein [Populus trichocarpa] 0.909 0.774 0.764 1e-109
225440510336 PREDICTED: mitochondrial substrate carri 0.916 0.782 0.740 1e-107
255566518248 Mitochondrial deoxynucleotide carrier, p 0.857 0.991 0.759 1e-106
>gi|296086165|emb|CBI31606.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/278 (79%), Positives = 239/278 (85%), Gaps = 3/278 (1%)

Query: 3   MQTEARVGVVVEGGQRGLSSGNGSVSVDKIT--LQQQQKQMLQNQSQIGTISQLLAGGVA 60
           MQTEARVGVVVEGGQR L+SG+G V+VD     L QQQK + Q QSQIGTI QLLAGG+A
Sbjct: 1   MQTEARVGVVVEGGQRALNSGHGGVAVDGTARKLAQQQKSLHQ-QSQIGTIPQLLAGGIA 59

Query: 61  GALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIA 120
           GALSKTCTAPLARLTILFQVQGMHSD ATL KASIW+EASRII EEGFRAFWKGNLVTIA
Sbjct: 60  GALSKTCTAPLARLTILFQVQGMHSDVATLTKASIWQEASRIIGEEGFRAFWKGNLVTIA 119

Query: 121 HRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDL 180
           HRLPYSSV+FYAYE YK +LH +P +ES   N S+DL VHFV+GGLAG+TAAS TYPLDL
Sbjct: 120 HRLPYSSVSFYAYERYKNILHLVPGLESHKRNTSADLGVHFVAGGLAGLTAASATYPLDL 179

Query: 181 VRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRS 240
           VRTRLAAQT VIYYRGI H LQTI R+EGIWGLYKGLGATLLGVGPSIAI+FSVYETLRS
Sbjct: 180 VRTRLAAQTKVIYYRGIGHTLQTIVREEGIWGLYKGLGATLLGVGPSIAINFSVYETLRS 239

Query: 241 FWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALH 278
            W S+R NDS VLVSL CGSLSGIASSTE +D    LH
Sbjct: 240 SWHSQRPNDSTVLVSLTCGSLSGIASSTEKQDEVQDLH 277




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449356|ref|XP_002282149.1| PREDICTED: mitochondrial substrate carrier family protein B isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449464462|ref|XP_004149948.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] gi|449513191|ref|XP_004164257.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224109442|ref|XP_002315196.1| predicted protein [Populus trichocarpa] gi|222864236|gb|EEF01367.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449448592|ref|XP_004142050.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449516015|ref|XP_004165043.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|118481007|gb|ABK92457.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224101051|ref|XP_002312122.1| predicted protein [Populus trichocarpa] gi|222851942|gb|EEE89489.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225440510|ref|XP_002272651.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis vinifera] gi|297740295|emb|CBI30477.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255566518|ref|XP_002524244.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] gi|223536521|gb|EEF38168.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query287
TAIR|locus:2078951332 AT3G55640 [Arabidopsis thalian 0.777 0.671 0.762 1.4e-87
TAIR|locus:2084460365 AT3G53940 [Arabidopsis thalian 0.773 0.608 0.720 8e-85
TAIR|locus:2065598337 AT2G37890 [Arabidopsis thalian 0.794 0.676 0.662 4.8e-78
UNIPROTKB|Q6NUK1477 SLC25A24 "Calcium-binding mito 0.679 0.408 0.411 3.6e-34
DICTYBASE|DDB_G0285599434 mcfB "calcium-dependent mitoch 0.745 0.493 0.408 4.6e-34
UNIPROTKB|F6Q4L6416 SLC25A24 "Uncharacterized prot 0.679 0.468 0.406 2.5e-33
UNIPROTKB|F1PEX8397 SLC25A24 "Uncharacterized prot 0.679 0.491 0.401 3.2e-33
MGI|MGI:1917160475 Slc25a24 "solute carrier famil 0.672 0.406 0.406 8.5e-33
UNIPROTKB|A5PJZ1477 SLC25A24 "Calcium-binding mito 0.679 0.408 0.406 1.1e-32
RGD|1311982475 Slc25a24 "solute carrier famil 0.672 0.406 0.401 2.9e-32
TAIR|locus:2078951 AT3G55640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
 Identities = 170/223 (76%), Positives = 195/223 (87%)

Query:    48 IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEG 107
             I + SQLLAGG+AGA SKTCTAPL+RLTILFQVQGMH++ A LRK SI  EASRI++EEG
Sbjct:    32 IESASQLLAGGLAGAFSKTCTAPLSRLTILFQVQGMHTNAAALRKPSILHEASRILNEEG 91

Query:   108 FRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLA 167
              +AFWKGNLVTIAHRLPYSSVNFYAYEHYKK ++ +  +E+  E +SS+LFVHFV+GGLA
Sbjct:    92 LKAFWKGNLVTIAHRLPYSSVNFYAYEHYKKFMYMVTGMENHKEGISSNLFVHFVAGGLA 151

Query:   168 GITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRDEGIWGLYKGLGATLLGVGPS 227
             GITAAS TYPLDLVRTRLAAQT VIYY GI H L++I  DEGI GLYKGLG TL+GVGPS
Sbjct:   152 GITAASATYPLDLVRTRLAAQTKVIYYSGIWHTLRSITTDEGILGLYKGLGTTLVGVGPS 211

Query:   228 IAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTET 270
             IAISFSVYE+LRS+W+S R +DSP++VSLACGSLSGIASST T
Sbjct:   212 IAISFSVYESLRSYWRSTRPHDSPIMVSLACGSLSGIASSTAT 254


GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2084460 AT3G53940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065598 AT2G37890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6NUK1 SLC25A24 "Calcium-binding mitochondrial carrier protein SCaMC-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285599 mcfB "calcium-dependent mitochondrial substrate carrier" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F6Q4L6 SLC25A24 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1PEX8 SLC25A24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1917160 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A5PJZ1 SLC25A24 "Calcium-binding mitochondrial carrier protein SCaMC-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1311982 Slc25a24 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00018399001
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (346 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query287
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-25
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-21
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-19
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-07
PTZ00168 259 PTZ00168, PTZ00168, mitochondrial carrier protein; 7e-06
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 0.003
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 96.9 bits (242), Expect = 1e-25
 Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 157 LFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNV--IYYRGICHALQTICRDEGIWGLY 214
                ++GG+AG  AA+VTYPLD+V+TRL +        Y+GI    + I ++EGI GLY
Sbjct: 5   FLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLY 64

Query: 215 KGLGATLLGVGPSIAISFSVYETLRSFWQSR 245
           KGL   LL V P+ AI F  YETL+     +
Sbjct: 65  KGLLPNLLRVAPAAAIYFGTYETLKKLLLKK 95


Length = 96

>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 287
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.97
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0770353 consensus Predicted mitochondrial carrier protein 99.97
KOG0766297 consensus Predicted mitochondrial carrier protein 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0769308 consensus Predicted mitochondrial carrier protein 99.96
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.95
KOG1519297 consensus Predicted mitochondrial carrier protein 99.91
KOG1519297 consensus Predicted mitochondrial carrier protein 99.82
KOG2745321 consensus Mitochondrial carrier protein [General f 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.77
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.73
KOG2745321 consensus Mitochondrial carrier protein [General f 99.67
KOG2954427 consensus Mitochondrial carrier protein [General f 99.63
KOG2954 427 consensus Mitochondrial carrier protein [General f 98.28
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=3.4e-46  Score=314.53  Aligned_cols=230  Identities=43%  Similarity=0.680  Sum_probs=207.7

Q ss_pred             chhHHHHHHHHHHHHHHHHhccchHHHHHHHHhcCCCCCccccccccHHHHHHHHHhhhchhhhhcchhhhhhhhccchh
Q 023092           48 IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYSS  127 (287)
Q Consensus        48 ~~~~~~~~~g~~a~~~~~~i~~Ple~vk~~~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~  127 (287)
                      ....+.+++|++||+++..++.|+|++|+|+|++...  ....+++|.++.+++|+++||++|||||-.+.+++.+|+.+
T Consensus        25 ~~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~--~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~a  102 (320)
T KOG0752|consen   25 ITGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEP--SKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGA  102 (320)
T ss_pred             HHHHHHHhcchHHHHHHHHhcCchhHceEEEEecccc--ccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecch
Confidence            3678889999999999999999999999999999865  34567889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCcccccCCCCchhHHHHHHhhhHHHHhHhhhcccHHHHHHHHHhccCCcccCcHHHHHHHHHHh
Q 023092          128 VNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTNVIYYRGICHALQTICRD  207 (287)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~P~d~ikt~~q~~~~~~~~~s~~~~~~~i~~~  207 (287)
                      ++|..||..++......      .....+....++||++||.+++++++|+|++|+|+..+++...|++..+++++||++
T Consensus       103 vqf~aye~~k~~~~~~~------~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~  176 (320)
T KOG0752|consen  103 VQFSAYEQYKKLVLGVD------PNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYRE  176 (320)
T ss_pred             hhhhHHHHhhhhhhccC------cccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHh
Confidence            99999999998543221      111567889999999999999999999999999999998877899999999999999


Q ss_pred             hChhhcccchhHHHhhHHHHHHHHHHHHHHHHH-HHhhcCC-CCchhHHHHHhHHHHHHhhhhhcchHHHHHHHhccCCC
Q 023092          208 EGIWGLYKGLGATLLGVGPSIAISFSVYETLRS-FWQSRRQ-NDSPVLVSLACGSLSGIASSTETEDVGLALHQVFNQSD  285 (287)
Q Consensus       208 ~Gi~glyrG~~~~~~~~~~~~~~~~~~ye~l~~-~~~~~~~-~~~~~~~~~~~g~~a~~~a~~~~~p~~~~r~q~~~~~~  285 (287)
                      ||++|||||+.|++++.+|+.++.|.+||.+|+ .+.+..+ ++.+.+..++||++||+++.++|||+|.+|+|||....
T Consensus       177 eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~  256 (320)
T KOG0752|consen  177 EGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGL  256 (320)
T ss_pred             cchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCc
Confidence            999999999999999999999999999999999 5544443 46678999999999999999999999999999998764



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query287
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-22
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-12
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-04
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 16/198 (8%) Query: 51 ISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSD-TATLRKASIWREASRIISEEGFR 109 + LAGGVA A+SKT AP+ R+ +L QVQ +A + I RI E+GF Sbjct: 8 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 67 Query: 110 AFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHF----VSGG 165 +FW+GNL + P ++NF + YK++ G + + +F SGG Sbjct: 68 SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLG-------GVDRHKQFWRYFAGNLASGG 120 Query: 166 LAGITAASVTYPLDLVRTRLAAQTNV----IYYRGICHALQTICRDEGIWGLYKGLGATL 221 AG T+ YPLD RTRLAA + G+ + + I + +G+ GLY+G ++ Sbjct: 121 AAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSV 180 Query: 222 LGVGPSIAISFSVYETLR 239 G+ A F VY+T + Sbjct: 181 QGIIIYRAAYFGVYDTAK 198
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query287
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-84
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-42
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-11
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-33
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-32
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 6e-27
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  254 bits (651), Expect = 2e-84
 Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 10/230 (4%)

Query: 44  NQSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKA-SIWREASRI 102
           +   +  +   LAGGVA A+SKT  AP+ R+ +L QVQ      +  ++   I     RI
Sbjct: 1   SDQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRI 60

Query: 103 ISEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFV 162
             E+GF +FW+GNL  +    P  ++NF   + YK++         Q          +  
Sbjct: 61  PKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFW---RYFAGNLA 117

Query: 163 SGGLAGITAASVTYPLDLVRTRLAAQTNVI----YYRGICHALQTICRDEGIWGLYKGLG 218
           SGG AG T+    YPLD  RTRLAA          + G+ + +  I + +G+ GLY+G  
Sbjct: 118 SGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFN 177

Query: 219 ATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASST 268
            ++ G+    A  F VY+T +         +  ++VS          +  
Sbjct: 178 VSVQGIIIYRAAYFGVYDTAKGMLP--DPKNVHIIVSWMIAQTVTAVAGL 225


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query287
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=7e-44  Score=307.78  Aligned_cols=232  Identities=29%  Similarity=0.478  Sum_probs=200.0

Q ss_pred             chhHHHHHHHHHHHHHHHHhccchHHHHHHHHhcCCCCC-ccccccccHHHHHHHHHhhhchhhhhcchhhhhhhhccch
Q 023092           48 IGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSD-TATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPYS  126 (287)
Q Consensus        48 ~~~~~~~~~g~~a~~~~~~i~~Ple~vk~~~q~~~~~~~-~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~  126 (287)
                      .+....+++|++|++++.++++|+|+||+|+|++..... ....+|++.++++++++++||++|||||+.+++++.++..
T Consensus         5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~   84 (297)
T 1okc_A            5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ   84 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHH
Confidence            456788999999999999999999999999999864321 1244689999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhcCCcccccCCCCchhHHHHHHhhhHHHHhHhhhcccHHHHHHHHHhccC----CcccCcHHHHHH
Q 023092          127 SVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTN----VIYYRGICHALQ  202 (287)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~P~d~ikt~~q~~~~----~~~~~s~~~~~~  202 (287)
                      +++|.+||.+|+.+.....   ..+....+....+++|++||+++.++++|+|+||+|+|.+..    ...|.+..++++
T Consensus        85 ~~~f~~ye~~k~~~~~~~~---~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~  161 (297)
T 1okc_A           85 ALNFAFKDKYKQIFLGGVD---RHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCIT  161 (297)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHhccccC---cccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHH
Confidence            9999999999995432211   111122345678999999999999999999999999999853    346899999999


Q ss_pred             HHHHhhChhhcccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhHHHHHHhhhhhcchHHHHHHHhcc
Q 023092          203 TICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVFN  282 (287)
Q Consensus       203 ~i~~~~Gi~glyrG~~~~~~~~~~~~~~~~~~ye~l~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~~~p~~~~r~q~~~  282 (287)
                      +++++||+.|||||+.+++++.+|+.+++|.+||.+|+.+.+..  +.+.+..+++|+++|++++++++|+|++|+|+|.
T Consensus       162 ~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~--~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~  239 (297)
T 1okc_A          162 KIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM  239 (297)
T ss_dssp             HHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG--CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC--CccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhh
Confidence            99999999999999999999999999999999999999775432  3456888999999999999999999999999887


Q ss_pred             CC
Q 023092          283 QS  284 (287)
Q Consensus       283 ~~  284 (287)
                      +.
T Consensus       240 ~~  241 (297)
T 1okc_A          240 QS  241 (297)
T ss_dssp             TT
T ss_pred             cC
Confidence            64



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 287
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-23
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-16
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 93.2 bits (230), Expect = 7e-23
 Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 8/213 (3%)

Query: 45  QSQIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSDTATLRKA-SIWREASRII 103
              +  +   LAGGVA A+SKT  AP+ R+ +L QVQ      +  ++   I     RI 
Sbjct: 1   DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIP 60

Query: 104 SEEGFRAFWKGNLVTIAHRLPYSSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVS 163
            E+GF +FW+GNL  +    P  ++NF   + YK++         Q          +  S
Sbjct: 61  KEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRY---FAGNLAS 117

Query: 164 GGLAGITAASVTYPLDLVRTRLAAQTNVIY----YRGICHALQTICRDEGIWGLYKGLGA 219
           GG AG T+    YPLD  RTRLAA          + G+ + +  I + +G+ GLY+G   
Sbjct: 118 GGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNV 177

Query: 220 TLLGVGPSIAISFSVYETLRSFWQSRRQNDSPV 252
           ++ G+    A  F VY+T +      +     V
Sbjct: 178 SVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIV 210


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query287
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=5.8e-40  Score=280.39  Aligned_cols=234  Identities=29%  Similarity=0.468  Sum_probs=206.3

Q ss_pred             cchhHHHHHHHHHHHHHHHHhccchHHHHHHHHhcCCCCC-ccccccccHHHHHHHHHhhhchhhhhcchhhhhhhhccc
Q 023092           47 QIGTISQLLAGGVAGALSKTCTAPLARLTILFQVQGMHSD-TATLRKASIWREASRIISEEGFRAFWKGNLVTIAHRLPY  125 (287)
Q Consensus        47 ~~~~~~~~~~g~~a~~~~~~i~~Ple~vk~~~q~~~~~~~-~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~  125 (287)
                      ..++.+.+++|++|++++.+++||||+||+|+|++..... .....+++.++++++++++||+++||||+.+.+++..+.
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            4678899999999999999999999999999999875432 235678999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhcCCcccccCCCCchhHHHHHHhhhHHHHhHhhhcccHHHHHHHHHhccC----CcccCcHHHHH
Q 023092          126 SSVNFYAYEHYKKLLHAIPVVESQGENMSSDLFVHFVSGGLAGITAASVTYPLDLVRTRLAAQTN----VIYYRGICHAL  201 (287)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~v~~P~d~ikt~~q~~~~----~~~~~s~~~~~  201 (287)
                      .+++|.+||.+++.+.+....   .++........+++|.+|++++.++++|+|++|+|+|.+..    ...+.+..+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~  159 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDR---HKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCI  159 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCT---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHH
T ss_pred             cchhHHHHHHHHHHHhccccc---ccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHH
Confidence            999999999999998765431   23333456677889999999999999999999999999854    34678999999


Q ss_pred             HHHHHhhChhhcccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHhHHHHHHhhhhhcchHHHHHHHhc
Q 023092          202 QTICRDEGIWGLYKGLGATLLGVGPSIAISFSVYETLRSFWQSRRQNDSPVLVSLACGSLSGIASSTETEDVGLALHQVF  281 (287)
Q Consensus       202 ~~i~~~~Gi~glyrG~~~~~~~~~~~~~~~~~~ye~l~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~~~p~~~~r~q~~  281 (287)
                      ++++++||+++||+|+.+++++.+++.+++|.+||.+|+.+.+..  ..+....++++++++++++++++|+|++|+|+|
T Consensus       160 ~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q  237 (292)
T d1okca_         160 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM  237 (292)
T ss_dssp             HHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG--CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccccc--ccchHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence            999999999999999999999999999999999999998765543  445688899999999999999999999999999


Q ss_pred             cCCC
Q 023092          282 NQSD  285 (287)
Q Consensus       282 ~~~~  285 (287)
                      .++.
T Consensus       238 ~~~~  241 (292)
T d1okca_         238 MQSG  241 (292)
T ss_dssp             TTTT
T ss_pred             hcCC
Confidence            8764



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure