Citrus Sinensis ID: 023112

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
MAILRNAIALFVLLYCLVSCSCVLGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
cccHHHHHHHHHHHHHHHHcccccccccccccccEEEEccccEEEEccccEEEEEEcccccccEEEccEEEEEEEEEEEEEccccccEEEEEEEEccccccccccEEEEEEcccccccEEEEEEEEEEccccEEEEEEcccccccccEEEEEEEcccEEEEEEccEEEEEEEccccccccccccccEEEEEEccccccccccEEEEccccccEEEEEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHccEEEEccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccEEEEccccEEEEEEEccccccccccccEEEEEEEEEEEEcccccccEEEEEEEcccccccccEEEEEEccccccccEEEEEEEEEccEccccEEEEcccccccccEEEEEEEEccEEEEEEccccEEEEEcccccccccccccEEEEEEcccccHccccccEEcccccccEEEEEEccccccEEcccccccccccccccccHHHHHccHHHHHHHHHHHHccEEEEcccccccccccccccEccc
MAILRNAIALFVLLYCLVScscvlgrpatfledfkvTWSDAHLRQIEGGRAIQLVLDqnsgcgfaskrqylfgrvsmkiklvpgdsagTVTAFYMNsntenvrdeldfeflgnrtgqpytvqtniyangkgdreqrvnlwfdpaadyHLYTILWNHHHIvfyvddvpirvyknsgrapfpmnqpmgvystlweaddwatrgglekidwskapfyayyrdfdiegcpvpgpancasnpgnwweaNNYQALTAMEARRYRWVRLNHMIYdyctdksrypvpppeclagi
MAILRNAIALFVLLYCLVSCSCVLGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFlgnrtgqpytVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNsgrapfpmnqPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDyctdksrypvppPECLAGI
MAILRNAIAlfvllyclvscscvlGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
**ILRNAIALFVLLYCLVSCSCVLGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSR************
********ALFVLLYCLVSCSCVLGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASN**************AMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
MAILRNAIALFVLLYCLVSCSCVLGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
*AILRNAIALFVLLYCLVSCSCVLGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAILRNAIALFVLLYCLVSCSCVLGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query287 2.2.26 [Sep-21-2011]
Q8LF99292 Probable xyloglucan endot yes no 0.951 0.934 0.764 1e-130
Q8LER3293 Probable xyloglucan endot no no 1.0 0.979 0.707 1e-126
P93349295 Probable xyloglucan endot N/A no 0.951 0.925 0.528 7e-86
Q40144296 Probable xyloglucan endot N/A no 0.982 0.952 0.508 1e-85
Q9XIW1293 Probable xyloglucan endot no no 0.940 0.921 0.535 3e-85
Q41542293 Probable xyloglucan endot N/A no 0.878 0.860 0.562 1e-82
Q6YDN9295 Xyloglucan endotransgluco N/A no 0.975 0.949 0.513 3e-82
Q8L9A9305 Probable xyloglucan endot no no 0.951 0.895 0.517 5e-82
Q41638292 Xyloglucan endotransgluco N/A no 0.940 0.924 0.542 1e-81
Q39857295 Probable xyloglucan endot no no 0.881 0.857 0.569 1e-81
>sp|Q8LF99|XTH6_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2 Back     alignment and function desciption
 Score =  463 bits (1192), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 214/280 (76%), Positives = 243/280 (86%), Gaps = 7/280 (2%)

Query: 8   IALFVLLYCLVSCSCVLGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASK 67
             L  L++  VS      RPATF+EDFK  WS++H+RQ+E G+AIQLVLDQ++GCGFASK
Sbjct: 18  FTLLTLMFIRVS-----ARPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASK 72

Query: 68  RQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYA 127
           R+YLFGRVSMKIKL+PGDSAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A
Sbjct: 73  RKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFA 132

Query: 128 NGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPM 185
           +GKGDREQRVNLWFDP+ DYH YTILW+H HIVFYVDDVPIR YKN  +    +P +QPM
Sbjct: 133 HGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPM 192

Query: 186 GVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANN 245
           GVYSTLWEADDWATRGGLEKIDWSKAPFYAYY+DFDIEGCPVPGP  C SNP NWWE   
Sbjct: 193 GVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYA 252

Query: 246 YQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLA 285
           YQ+L A+EARRYRWVR+NHM+YDYCTD+SR+PVPPPEC A
Sbjct: 253 YQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVPPPECRA 292
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|Q8LER3|XTH7_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2 Back     alignment and function description
>sp|P93349|XTH_TOBAC Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q40144|XTH1_SOLLC Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1 Back     alignment and function description
>sp|Q9XIW1|XTH5_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1 Back     alignment and function description
>sp|Q41542|XTH_WHEAT Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q6YDN9|XTH_BRAOB Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1 Back     alignment and function description
>sp|Q8L9A9|XTH8_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=2 Back     alignment and function description
>sp|Q41638|XTHA_PHAAN Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1 Back     alignment and function description
>sp|Q39857|XTH_SOYBN Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query287
308229784290 xyloglucan endotransglucosylase/hydrolas 1.0 0.989 0.810 1e-141
308229792290 putative xyloglucan endotransglucosylase 1.0 0.989 0.806 1e-141
308229782289 xyloglucan endotransglucosylase/hydrolas 0.965 0.958 0.832 1e-140
308229790289 putative xyloglucan endotransglucosylase 0.965 0.958 0.825 1e-139
308229788289 putative xyloglucan endotransglucosylase 0.965 0.958 0.818 1e-138
166343775289 xyloglucan endotransglycosylase/hydrolas 0.982 0.975 0.804 1e-137
155966599289 xyloglucan endotransglycosylase [Gossypi 0.982 0.975 0.804 1e-137
124109183294 xyloglucan endotransglycosylase/hydrolas 0.986 0.962 0.807 1e-137
155966601289 xyloglucan endotransglycosylase [Gossypi 0.982 0.975 0.808 1e-136
340396652293 xyloglucan endotransglucosylase/hydrolas 1.0 0.979 0.771 1e-136
>gi|308229784|gb|ADO24300.1| xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 235/290 (81%), Positives = 259/290 (89%), Gaps = 3/290 (1%)

Query: 1   MAILRNAIALFVLLYCLVSCS-CVLGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQN 59
           M +   + A   +  C ++CS  V GRP TFLEDF++TWSD+H++QI+GGRAIQL+LDQN
Sbjct: 1   MTMATLSSAFLFIFSCFLACSISVSGRPTTFLEDFRITWSDSHIKQIDGGRAIQLILDQN 60

Query: 60  SGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPY 119
           SGCGFASKRQYLFGRVSMKIKL+PGDSAGTVTAFYMNS+T+ VRDELDFEFLGNRTGQPY
Sbjct: 61  SGCGFASKRQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDTVRDELDFEFLGNRTGQPY 120

Query: 120 TVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRA 177
           TVQTNIYA+GKGDREQRVNLWFDPAAD+H YTI+WNHHHIVFYVD+VPIRVYKN  +   
Sbjct: 121 TVQTNIYAHGKGDREQRVNLWFDPAADFHTYTIMWNHHHIVFYVDEVPIRVYKNNEAKNI 180

Query: 178 PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNP 237
           P+P  QPMGVYSTLWEADDWATRGGLEKIDWSKAPF AYY+DFDIEGCPVPGPANCASNP
Sbjct: 181 PYPKFQPMGVYSTLWEADDWATRGGLEKIDWSKAPFLAYYKDFDIEGCPVPGPANCASNP 240

Query: 238 GNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI 287
            NWWE   YQAL AMEARRYRWVR+NHMIYDYCTDKSRYPV PPEC+AGI
Sbjct: 241 RNWWEGTAYQALNAMEARRYRWVRMNHMIYDYCTDKSRYPVTPPECMAGI 290

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|308229792|gb|ADO24304.1| putative xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|308229782|gb|ADO24299.1| xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|308229790|gb|ADO24303.1| putative xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|308229788|gb|ADO24302.1| putative xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|166343775|gb|ABY86635.1| xyloglucan endotransglycosylase/hydrolase [Gossypium raimondii] Back     alignment and taxonomy information
>gi|155966599|gb|ABU41234.1| xyloglucan endotransglycosylase [Gossypium hirsutum] gi|308229786|gb|ADO24301.1| xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] gi|308229794|gb|ADO24305.1| xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|124109183|gb|ABM91067.1| xyloglucan endotransglycosylase/hydrolase precursor XTH-36 [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|155966601|gb|ABU41235.1| xyloglucan endotransglycosylase [Gossypium hirsutum] gi|166343773|gb|ABY86634.1| xyloglucan endotransglycosylase/hydrolase [Gossypium arboreum] Back     alignment and taxonomy information
>gi|340396652|gb|AEK32594.1| xyloglucan endotransglucosylase/hydrolase [Tagetes patula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query287
TAIR|locus:2169990292 XTH6 "xyloglucan endotransgluc 0.905 0.890 0.801 1.5e-122
TAIR|locus:2137609293 XTH7 "xyloglucan endotransgluc 0.912 0.894 0.765 7.7e-119
TAIR|locus:2159118293 XTH5 "xyloglucan endotransgluc 0.878 0.860 0.569 4.5e-82
TAIR|locus:2065821296 XTH4 "xyloglucan endotransgluc 0.881 0.854 0.540 1.5e-76
TAIR|locus:2823919305 XTH8 "xyloglucan endotransgluc 0.888 0.836 0.528 8.1e-76
TAIR|locus:2125437290 XTH9 "xyloglucan endotransgluc 0.881 0.872 0.524 2.5e-72
TAIR|locus:2095168291 XTH16 "xyloglucan endotransglu 0.885 0.872 0.515 3.7e-71
TAIR|locus:2064284299 XTH10 "xyloglucan endotransglu 0.881 0.846 0.509 4.8e-71
TAIR|locus:2129445289 XTH15 "xyloglucan endotransglu 0.881 0.875 0.507 9.9e-71
TAIR|locus:2174497284 TCH4 "Touch 4" [Arabidopsis th 0.895 0.904 0.530 2.6e-70
TAIR|locus:2169990 XTH6 "xyloglucan endotransglucosylase/hydrolase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1205 (429.2 bits), Expect = 1.5e-122, P = 1.5e-122
 Identities = 210/262 (80%), Positives = 237/262 (90%)

Query:    26 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGD 85
             RPATF+EDFK  WS++H+RQ+E G+AIQLVLDQ++GCGFASKR+YLFGRVSMKIKL+PGD
Sbjct:    31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGD 90

Query:    86 SAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAA 145
             SAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQRVNLWFDP+ 
Sbjct:    91 SAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSM 150

Query:   146 DYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGL 203
             DYH YTILW+H HIVFYVDDVPIR YKN+      +P +QPMGVYSTLWEADDWATRGGL
Sbjct:   151 DYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGL 210

Query:   204 EKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLN 263
             EKIDWSKAPFYAYY+DFDIEGCPVPGP  C SNP NWWE   YQ+L A+EARRYRWVR+N
Sbjct:   211 EKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVN 270

Query:   264 HMIYDYCTDKSRYPVPPPECLA 285
             HM+YDYCTD+SR+PVPPPEC A
Sbjct:   271 HMVYDYCTDRSRFPVPPPECRA 292
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006073 "cellular glucan metabolic process" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
GO:0009414 "response to water deprivation" evidence=IEP
GO:0009269 "response to desiccation" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
TAIR|locus:2137609 XTH7 "xyloglucan endotransglucosylase/hydrolase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159118 XTH5 "xyloglucan endotransglucosylase/hydrolase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065821 XTH4 "xyloglucan endotransglucosylase/hydrolase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2823919 XTH8 "xyloglucan endotransglucosylase/hydrolase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125437 XTH9 "xyloglucan endotransglucosylase/hydrolase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095168 XTH16 "xyloglucan endotransglucosylase/hydrolase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2064284 XTH10 "xyloglucan endotransglucosylase/hydrolase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129445 XTH15 "xyloglucan endotransglucosylase/hydrolase 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174497 TCH4 "Touch 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q41638XTHA_PHAAN2, ., 4, ., 1, ., 2, 0, 70.54280.94070.9246N/Ano
Q8LNZ5XTHB_PHAAN2, ., 4, ., 1, ., 2, 0, 70.51910.96160.9419N/Ano
Q6YDN9XTH_BRAOB2, ., 4, ., 1, ., 2, 0, 70.51360.97560.9491N/Ano
Q8LER3XTH7_ARATH2, ., 4, ., 1, ., 2, 0, 70.70791.00.9795nono
P93349XTH_TOBAC2, ., 4, ., 1, ., 2, 0, 70.52810.95120.9254N/Ano
Q41542XTH_WHEAT2, ., 4, ., 1, ., 2, 0, 70.56200.87800.8600N/Ano
Q8LF99XTH6_ARATH2, ., 4, ., 1, ., 2, 0, 70.76420.95120.9349yesno
Q40144XTH1_SOLLC2, ., 4, ., 1, ., 2, 0, 70.50850.98250.9527N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.207LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_VII0038
hypothetical protein (296 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query287
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 1e-165
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 1e-102
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 6e-80
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 4e-31
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 2e-21
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 6e-21
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 9e-20
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 4e-15
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 2e-10
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  457 bits (1179), Expect = e-165
 Identities = 155/260 (59%), Positives = 193/260 (74%), Gaps = 4/260 (1%)

Query: 28  ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSA 87
           A+F E+F VTW   H+R    G ++QL LDQ+SG GF SK +YLFG  SM+IKL PGDSA
Sbjct: 4   ASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPGDSA 63

Query: 88  GTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADY 147
           GTVTAFY++S   +  DE+DFEFLGN TGQPYT+QTN++ANG G REQR+ LWFDP AD+
Sbjct: 64  GTVTAFYLSSQGPDNHDEIDFEFLGNVTGQPYTLQTNVFANGVGGREQRIYLWFDPTADF 123

Query: 148 HLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEK 205
           H Y+ILWN H IVFYVDDVPIRV+KN+     P+P +QPMGVY+++W+  DWAT+GG  K
Sbjct: 124 HTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGGRVK 183

Query: 206 IDWSKAPFYAYYRDFDIEGCPVPGPANCASNPG--NWWEANNYQALTAMEARRYRWVRLN 263
           IDWS APF A YRDF ++GC V    + +S     +WW  + YQ L+A + R   WVR N
Sbjct: 184 IDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWVRRN 243

Query: 264 HMIYDYCTDKSRYPVPPPEC 283
           +M+YDYC D+ RYPVPPPEC
Sbjct: 244 YMVYDYCDDRKRYPVPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 287
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 100.0
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 100.0
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 100.0
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 100.0
cd08023235 GH16_laminarinase_like Laminarinase, member of the 100.0
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.97
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.97
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.97
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.96
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.96
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.94
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.84
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 99.68
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 99.59
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 96.13
smart00560133 LamGL LamG-like jellyroll fold domain. 89.99
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 89.24
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 88.07
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 87.48
smart00210184 TSPN Thrombospondin N-terminal -like domains. Hepa 86.29
PF10287235 DUF2401: Putative TOS1-like glycosyl hydrolase (DU 83.39
cd00110151 LamG Laminin G domain; Laminin G-like domains are 81.22
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.3e-84  Score=597.99  Aligned_cols=278  Identities=48%  Similarity=0.889  Sum_probs=251.5

Q ss_pred             HHHHHHHHHHhhhhcccccCcccccCceeeecCCCeEEeeCCcEEEEEEcCCCcceEEEeeeEEeeEEEEEEEeeCCCCC
Q 023112            8 IALFVLLYCLVSCSCVLGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSA   87 (287)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~f~~~f~~~w~~~~v~~~~~G~~l~L~l~~~sga~i~Sk~~~~yG~~eariKlp~g~s~   87 (287)
                      .+||+++++++++.-..-....|.++|.++|+.+|+.+.++|+.|+|+||+.+|++|+||+.|+||+||||||+|+|+++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~G~sa   84 (291)
T PLN03161          5 KTLLVALFAALAAFDRSFVEADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVPGNSA   84 (291)
T ss_pred             HHHHHHHHHHHHhcCCCcccccccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCCCCCC
Confidence            34455555444444444456789999999999999999888889999999999999999999999999999999998889


Q ss_pred             ceEEEEEeecCCCCCCCeEEEEEeCCCCCCccEEEeeeecCCCCCcceEEecCCCCCCCcEEEEEEEcCCeEEEEECCee
Q 023112           88 GTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVP  167 (287)
Q Consensus        88 G~v~Afwl~~~~p~~~~EID~E~lG~~~g~p~~~~tn~~~~g~g~~e~~~~l~~d~~~dfHtY~i~Wtp~~I~fyVDG~~  167 (287)
                      |+||||||++.++. +||||||+||+++++|+++|||+|.+|.+++++++.++||++++||+|+|+|+|++|+|||||++
T Consensus        85 G~v~AFwl~s~~~~-~dEIDiEfLG~~~g~~~~vqtN~y~~g~g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~wyVDG~~  163 (291)
T PLN03161         85 GTVTAYYLSSTGSR-HDEIDFEFLGNVSGQPYTIHTNIYTQGNGSREQQFRPWFDPTADFHNYTIHWNPSEVVWYVDGTP  163 (291)
T ss_pred             CeEEEEEecCCCCC-CCeEEEEecCCCCCCceEEEeceEeCCcCCcceeccccCCCccCcEEEEEEEchhhEEEEECCEE
Confidence            99999999997666 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCC--CCCCCCCCeEEEEEeeeCCCccccCCCcccCCCCCCEEEEEcEEEEeeecCC-C--CCcCCCC-CCCcc
Q 023112          168 IRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVP-G--PANCASN-PGNWW  241 (287)
Q Consensus       168 vr~~~~~~~--~~~P~~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~-~--~~~c~~~-~~~~~  241 (287)
                      ||++++.+.  .+||+++||+|++|||+|++|||+||++||||+++||+|.|++|+++||.++ +  ...|... +..||
T Consensus       164 iRt~~~~~~~g~~yP~~~pM~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~~~~c~~~~~~~~~  243 (291)
T PLN03161        164 IRVFRNYENEGIAYPNKQGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVSIKQCADPTPSNWW  243 (291)
T ss_pred             EEEEEcccccCCcCCCccceEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCCccccCCCCccccc
Confidence            999987554  6799878999999999999999999999999999999999999999999873 2  3479754 46799


Q ss_pred             cccccccCCHHHHHHHHHHhhcCeEeecCCCCCCCCC-CCCCCcCC
Q 023112          242 EANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPV-PPPECLAG  286 (287)
Q Consensus       242 ~~~~~~~l~~~~~~~~~~~~~~~~~y~yc~d~~r~~~-~~~ec~~~  286 (287)
                      +++.|++|+++|+++|+|||+||||||||+|++|||+ +||||.++
T Consensus       244 ~~~~~~~l~~~~~~~~~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~~  289 (291)
T PLN03161        244 TSPSYSQLTNAQLTQMKKVRDNFMIYDYCKDTKRFNGVMPPECFKP  289 (291)
T ss_pred             cCccccCCCHHHHHHHHHHHhCcEEEeccCCCCcCCCCcCcccCCC
Confidence            9999999999999999999999999999999999998 89999764

>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>smart00560 LamGL LamG-like jellyroll fold domain Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>smart00210 TSPN Thrombospondin N-terminal -like domains Back     alignment and domain information
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi Back     alignment and domain information
>cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query287
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 4e-87
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 2e-51
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 2e-51
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 7e-50
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 1e-49
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 2e-12
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 8e-10
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 9e-10
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 1e-09
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 1e-09
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 1e-09
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 1e-09
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 2e-09
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 6e-09
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 4e-08
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 6e-08
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure 
Iteration: 1

 Score =  317 bits (813), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 152/260 (58%), Positives = 186/260 (71%), Gaps = 6/260 (2%)
Query: 28  ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSA 87
             F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM++KLVPGDSA
Sbjct: 15  VAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSA 74
Query: 88  GTVTAFYMNS-NTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAAD 146
           GTVTAFY++S N+E+  DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  +
Sbjct: 75  GTVTAFYLSSQNSEH--DEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKE 132
Query: 147 YHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLE 204
           +H Y++LWN + IVF VDDVPIRV+KN       FP NQPM +YS+LW ADDWATRGGLE
Sbjct: 133 FHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLE 192
Query: 205 KIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLN 263
           K DWSKAPF A YR F I+GC     A  CA+    WW+   +Q L A + RR  WVR  
Sbjct: 193 KTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQK 252
Query: 264 HMIYDYCTDKSRYPVPPPEC 283
           + IY+YCTD+SRYP  PPEC
Sbjct: 253 YTIYNYCTDRSRYPSMPPEC 272
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query287
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 1e-116
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 1e-103
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 9e-67
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 1e-66
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 3e-64
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 4e-62
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 1e-56
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 4e-51
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 7e-51
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 6e-21
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 9e-15
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 1e-10
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 3e-10
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 3e-10
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 8e-10
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 2e-09
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 1e-08
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 1e-08
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 3e-08
3rq0_A269 Glycosyl hydrolases family protein 16; structural 3e-07
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 3e-07
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 8e-07
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 1e-06
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 3e-05
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 3e-04
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 7e-04
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
 Score =  335 bits (860), Expect = e-116
 Identities = 152/270 (56%), Positives = 186/270 (68%), Gaps = 6/270 (2%)

Query: 19  SCSCVLGRPA--TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVS 76
           +    L +P    F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  S
Sbjct: 4   AAFAALRKPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFS 63

Query: 77  MKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQR 136
           M++KLVPGDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR
Sbjct: 64  MQMKLVPGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQR 122

Query: 137 VNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRA--PFPMNQPMGVYSTLWEA 194
           + LWFDP  ++H Y++LWN + IVF VDDVPIRV+KN       FP NQPM +YS+LW A
Sbjct: 123 IYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNA 182

Query: 195 DDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAME 253
           DDWATRGGLEK DWSKAPF A YR F I+GC     A  CA+    WW+   +Q L A +
Sbjct: 183 DDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQ 242

Query: 254 ARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 283
            RR  WVR  + IY+YCTD+SRYP  PPEC
Sbjct: 243 YRRLSWVRQKYTIYNYCTDRSRYPSMPPEC 272
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Length = 266 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Length = 269 Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Length = 288 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Length = 324 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Length = 363 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Length = 280 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Length = 308 Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Length = 346 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query287
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 100.0
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 100.0
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 100.0
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 100.0
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 100.0
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 100.0
3rq0_A269 Glycosyl hydrolases family protein 16; structural 100.0
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 100.0
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 100.0
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 100.0
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 100.0
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 100.0
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 100.0
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 100.0
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 100.0
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 100.0
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 100.0
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 100.0
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 100.0
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.97
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.95
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.94
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.85
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.79
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 96.95
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 95.37
4dqa_A355 Uncharacterized protein; two domains structure, DU 89.48
3pvn_A206 C-reactive protein; pentraxin family, immune syste 86.52
3kqr_A204 Serum amyloid P-component; glycoprotein, disulfide 84.05
3u1x_A236 Putative glycosyl hydrolase; glycosyl hydrolysis, 83.66
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-80  Score=570.49  Aligned_cols=262  Identities=57%  Similarity=1.096  Sum_probs=245.2

Q ss_pred             cccCcccccCceeeecCCCeEEeeCCcEEEEEEcCCCcceEEEeeeEEeeEEEEEEEeeCCCCCceEEEEEeecCCCCCC
Q 023112           24 LGRPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVR  103 (287)
Q Consensus        24 ~~~~~~f~~~f~~~w~~~~v~~~~~G~~l~L~l~~~sga~i~Sk~~~~yG~~eariKlp~g~s~G~v~Afwl~~~~p~~~  103 (287)
                      ...+.+|.++|+++|+++||++.++|+.|+|+|++++||+|+||+.|+||+||||||+|+|+++|+||||||++++|. +
T Consensus        11 ~~~~~~f~~~~~~~w~~~nv~~~~~G~~l~L~l~~~tsa~i~Sk~~f~YGr~Ear~Klp~g~s~G~wpAfwll~~~p~-~   89 (278)
T 1umz_A           11 KPVDVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSE-H   89 (278)
T ss_dssp             -CCCCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSS-C
T ss_pred             cccCCcccCCceeeECCCCEEEeCCCCEEEEEECCCccCEEEECcEEECEEEEEEEEeCCCCCCceEEEEEEecCCCC-C
Confidence            345678999999999999999988898999999999999999999999999999999999988999999999999887 9


Q ss_pred             CeEEEEEeCCCCCCccEEEeeeecCCCCCcceEEecCCCCCCCcEEEEEEEcCCeEEEEECCeeEEEEeCCCC--CCCCC
Q 023112          104 DELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPM  181 (287)
Q Consensus       104 ~EID~E~lG~~~g~p~~~~tn~~~~g~g~~e~~~~l~~d~~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~--~~~P~  181 (287)
                      +|||||++|+++++++++|+|+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||+++|++++.+.  .+|||
T Consensus        90 gEIDmE~lG~~~g~~~tvhtn~~~~g~~~~~~~~~l~~d~~~dFHtY~i~Wtp~~I~fyVDG~~v~t~~~~~~~g~~~Pf  169 (278)
T 1umz_A           90 DEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPF  169 (278)
T ss_dssp             CEEEEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSC
T ss_pred             CeEEEEEeCCCCCCceEEEEEEecCCCCCCcceEecCCCCccCcEEEEEEEecCeEEEEECCeEEEEEecCcCcCccCcC
Confidence            9999999999988899999999999999999999999999999999999999999999999999999987643  67999


Q ss_pred             CCCeEEEEEeeeCCCccccCCCcccCCCCCCEEEEEcEEEEeeecCC-CCCcCCCCCCCcccccccccCCHHHHHHHHHH
Q 023112          182 NQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVP-GPANCASNPGNWWEANNYQALTAMEARRYRWV  260 (287)
Q Consensus       182 ~~Pm~l~lnlw~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~~-~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~  260 (287)
                      ++||+|+||||+||+|+++||++++||+++||+++|+.+++++|..+ +...|.+.+..||+++.+++|+++|+++|+||
T Consensus       170 ~~P~~lilnlw~GG~Wa~~gG~~~~d~~~~p~v~~vr~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~  249 (278)
T 1umz_A          170 NQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWV  249 (278)
T ss_dssp             SSCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHH
T ss_pred             CCceEEEEEEEECCcccCCCCccccCCCCCCEEEEEEEEEEecccCCCCCCccCCCcccccccCccccCCHHHHHHHHHH
Confidence            99999999999999999999988999999999999999999999874 44569876677999999999999999999999


Q ss_pred             hhcCeEeecCCCCCCCCCCCCCCcCC
Q 023112          261 RLNHMIYDYCTDKSRYPVPPPECLAG  286 (287)
Q Consensus       261 ~~~~~~y~yc~d~~r~~~~~~ec~~~  286 (287)
                      |+||||||||+|++|||++||||.++
T Consensus       250 ~~~~~~y~yc~d~~r~~~~~~ec~~~  275 (278)
T 1umz_A          250 RQKYTIYNYCTDRSRYPSMPPECKRD  275 (278)
T ss_dssp             HHHTEEEEGGGCTTTCSSCCTHHHHH
T ss_pred             HHCCeEEecCCCCCcCCCCCcccCCC
Confidence            99999999999999999999999643
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus} Back     alignment and structure
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A Back     alignment and structure
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A* Back     alignment and structure
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 287
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 1e-105
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 3e-44
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 1e-26
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 2e-20
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 1e-09
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 5e-05
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  304 bits (779), Expect = e-105
 Identities = 150/259 (57%), Positives = 182/259 (70%), Gaps = 4/259 (1%)

Query: 28  ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSA 87
             F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM++KLVPGDSA
Sbjct: 4   VAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSA 63

Query: 88  GTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADY 147
           GTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  ++
Sbjct: 64  GTVTAFYLSSQNSEH-DEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEF 122

Query: 148 HLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEK 205
           H Y++LWN + IVF VDDVPIRV+KN       FP NQPM +YS+LW ADDWATRGGLEK
Sbjct: 123 HYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEK 182

Query: 206 IDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNH 264
            DWSKAPF A YR F I+GC     A  CA+    WW+   +Q L A + RR  WVR  +
Sbjct: 183 TDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKY 242

Query: 265 MIYDYCTDKSRYPVPPPEC 283
            IY+YCTD+SRYP  PPEC
Sbjct: 243 TIYNYCTDRSRYPSMPPEC 261
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query287
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 100.0
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.97
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.97
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.96
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.96
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 94.93
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 93.79
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 93.35
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 93.05
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 91.58
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 91.15
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 90.63
d2erfa1206 Thrombospondin 1 N-terminal domain {Human (Homo sa 90.17
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 86.76
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 84.92
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 84.71
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=1.3e-80  Score=566.82  Aligned_cols=259  Identities=58%  Similarity=1.113  Sum_probs=245.4

Q ss_pred             CcccccCceeeecCCCeEEeeCCcEEEEEEcCCCcceEEEeeeEEeeEEEEEEEeeCCCCCceEEEEEeecCCCCCCCeE
Q 023112           27 PATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDEL  106 (287)
Q Consensus        27 ~~~f~~~f~~~w~~~~v~~~~~G~~l~L~l~~~sga~i~Sk~~~~yG~~eariKlp~g~s~G~v~Afwl~~~~p~~~~EI  106 (287)
                      ..+|+++|.++|+++||++.++|..|+|+||+.+||+|+||++|+||+||||||||+|+++|++++||+.+.++. ++||
T Consensus         3 ~~~f~~~~~~~w~~~~v~~~~~g~~l~l~ld~~sga~i~Sk~~f~YG~~EariKlp~G~g~g~~~~f~~~s~~~~-~dEI   81 (267)
T d1umza_           3 DVAFGRNYVPTWAFDHIKYFNGGNEIQLHLDKYTGTGFQSKGSYLFGHFSMQMKLVPGDSAGTVTAFYLSSQNSE-HDEI   81 (267)
T ss_dssp             CCCHHHHEEEEECGGGEEEEGGGTEEEEEECSSCCEEEEESSCEEEEEEEEEEECCCSCCTTEEEEEEEECSSSS-CCEE
T ss_pred             cccCCCCceecCCCCCEEEeCCCeEEEEEECCcccCceEecceEEeeEEEEEEEcCCCCccEEEEEeeecCCCCC-CCeE
Confidence            467999999999999999999999999999999999999999999999999999999988899999999988887 9999


Q ss_pred             EEEEeCCCCCCccEEEeeeecCCCCCcceEEecCCCCCCCcEEEEEEEcCCeEEEEECCeeEEEEeCCCC--CCCCCCCC
Q 023112          107 DFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQP  184 (287)
Q Consensus       107 D~E~lG~~~g~p~~~~tn~~~~g~g~~e~~~~l~~d~~~dfHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~--~~~P~~~P  184 (287)
                      |||++|+..++++++|+|+|.+|.+++++++.+++|++++||+|+|+|+|++|+|||||++||++++.+.  .++|+++|
T Consensus        82 DiE~lG~~~~~~~~v~tn~~~~g~g~~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~~~g~~~p~~~p  161 (267)
T d1umza_          82 DFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCKDLGVKFPFNQP  161 (267)
T ss_dssp             EEEEECCSTTSCCEEEEEEEBTTBCCCCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCGGGTCCCSCSSC
T ss_pred             EEEEecccCCcccEEEeeEeCCCCCCcceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccccCCCCCCcceE
Confidence            9999999999999999999999999999999999999999999999999999999999999999998765  77888999


Q ss_pred             eEEEEEeeeCCCccccCCCcccCCCCCCEEEEEcEEEEeeecC-CCCCcCCCCCCCcccccccccCCHHHHHHHHHHhhc
Q 023112          185 MGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANCASNPGNWWEANNYQALTAMEARRYRWVRLN  263 (287)
Q Consensus       185 m~l~lnlw~gg~Wat~GG~~~~d~~~~Pf~a~~~~~~v~~c~~-~~~~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  263 (287)
                      |+|++|||+||+|||+||+.|+||+++||+|.|++|+|++|.+ +....|...+..||++..+++|+.+|+++|+|||+|
T Consensus       162 m~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  241 (267)
T d1umza_         162 MKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQK  241 (267)
T ss_dssp             BEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHHHHHHHHHHHHH
T ss_pred             EEEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCCCcccCCCCCccccccccccCCHHHHHHHHHHHHC
Confidence            9999999999999999999999999999999999999999988 555667666678999999999999999999999999


Q ss_pred             CeEeecCCCCCCCCCCCCCCcCC
Q 023112          264 HMIYDYCTDKSRYPVPPPECLAG  286 (287)
Q Consensus       264 ~~~y~yc~d~~r~~~~~~ec~~~  286 (287)
                      ||+||||+|++|||.+||||.+|
T Consensus       242 ~~~y~yC~d~~r~~~~p~EC~~~  264 (267)
T d1umza_         242 YTIYNYCTDRSRYPSMPPECKRD  264 (267)
T ss_dssp             TEEEEGGGCTTTCSSCCTHHHHH
T ss_pred             CcEEccCCCCCcCCCCCcccCCC
Confidence            99999999999999999999743
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d2erfa1 b.29.1.4 (A:10-215) Thrombospondin 1 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure