Citrus Sinensis ID: 023171


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
MAAKVADDQPPHPHPLQFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRSGKHAELWPEKKDKTSGKSKNNDKQKELSKDGQEVLDDRHKDTAEKPDEKSGDNPPGTGIEGQGGNGSGGKKKKKKKGNSSGTGGSGENVGNEPAAGITGSPAVAAAVDPIPSEVAPIPRHQQQYPSPPFMQQEHPPMYYPPHPAPLHGVSYNTTYPTASTSYYAPSMHAYYNSSYHRPGRYIPPDPIHKFTEDDHGYYDNDEGTAGCSIM
cccccccccccccccccccEEEEEEEccHHHHHHHHHHHHcccccEEEEEEEccccEEEEEEEccHHHHHHHHHHccccEEEccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccccccccccccccEEEEEEEEEEEEcccHHHHHHHHHHHHccccEEEEEcccccEEEEEEEccHHHHHHHHHHccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccHHccccccccccccccccccEcc
maakvaddqpphphplqfQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRSgkhaelwpekkdktsgksknndkQKELSKDGQEVLDDrhkdtaekpdeksgdnppgtgiegqggngsggkkkkkkkgnssgtggsgenvgnepaagitgspavaaavdpipsevapiprhqqqypsppfmqqehppmyypphpaplhgvsynttyptastsyyapsmhayynssyhrpgryippdpihkfteddhgyydndegtagcsim
maakvaddqpphphpLQFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLlrsgkhaelwpekkdktsgksknndkqkelskdgqevlddrhkdtaekpdeksgdnppgtgiegqggngsggkkkkkkkgnssgtggsgenvgnepAAGITGSPAVAAAVDPIPSEVAPIPRHQQQYPSPPFMQQEHPPMYYPPHPAPLHGVSYNTTYPTASTSYYAPSMHAYYNSSYHRPGRYIPPDPIHKFTEDDHGYYDNDEGTAGCSIM
MAAKVADDQPPHPHPLQFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRSGKHAELWPEKKDKTSGKSKNNDKQKELSKDGQEVLDDRHKDTAEKPDEKSGDNPPgtgiegqggngsggkkkkkkkgnssgtggsgenvgnEPAAGITGSPAVAAAVDPIPSEVAPIPRHQQQYPSPPFMQQEhppmyypphpapLHGVsynttyptastsyyapsMHAYYNSSYHRPGRYIPPDPIHKFTEDDHGYYDNDEGTAGCSIM
***************LQFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRS*************************************************************************************************************************************************LHGVSYNTTYPTASTSYYAPSMHAYYNSSYHRPGRYIPPDPIHKFT*******************
********************WVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRSGKHAEL********************************************************************************************************************************************HGVSYNTTYPT**************************************GYYDNDEGTAGCSIM
************PHPLQFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRSGKHAELWP********************************************NPPGTGIEG*************************ENVGNEPAAGITGSPAVAAAVDPIPSEVAPIPRHQQQYPSPPFMQQEHPPMYYPPHPAPLHGVSYNTTYPTASTSYYAPSMHAYYNSSYHRPGRYIPPDPIHKFTEDDHGYYDNDEGTAGCSIM
************PHPLQFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRSGKHAELWPEKKD***************************************************************************************************************YPSPPFMQQEHPPMYYPPHPAPLHGVSYNTTYPTASTSYYAPSMHAYYNSSYHRPGRYIPPDPIHKFTEDDHGYYDNDEGTAGCSIM
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAAKVADDQPPHPHPLQFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRSGKHAELWPEKKDKTSGKSKNNDKQKELSKDGQEVLDDRHKDTAEKPDEKSGDNPPGTGIEGQGGNGSGGKKKKKKKGNSSGTGGSGENVGNEPAAGITGSPAVAAAVDPIPSEVAPIPRHQQQYPSPPFMQQEHPPMYYPPHPAPLHGVSYNTTYPTASTSYYAPSMHAYYNSSYHRPGRYIPPDPIHKFTEDDHGYYDNDEGTAGCSIM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query286 2.2.26 [Sep-21-2011]
Q9SZN7153 Heavy metal-associated is no no 0.237 0.444 0.420 8e-10
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1 Back     alignment and function desciption
 Score = 64.7 bits (156), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 48/69 (69%), Gaps = 1/69 (1%)

Query: 17 QFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLL-R 75
          Q QT  +KV + CEGC++KV + ++G++GV +  ++ + HKVTV+G VD   ++ ++  R
Sbjct: 24 QLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHR 83

Query: 76 SGKHAELWP 84
          +GK  ELWP
Sbjct: 84 TGKKVELWP 92




Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
224132336292 predicted protein [Populus trichocarpa] 0.877 0.859 0.45 1e-47
255582154317 chloroplast-targeted copper chaperone, p 0.954 0.861 0.415 3e-41
224131176293 predicted protein [Populus trichocarpa] 0.905 0.883 0.402 2e-36
255646288294 unknown [Glycine max] 0.951 0.925 0.415 8e-34
356572718294 PREDICTED: uncharacterized protein LOC10 0.954 0.928 0.384 1e-33
225437292268 PREDICTED: uncharacterized protein LOC10 0.405 0.432 0.605 2e-32
356505554293 PREDICTED: uncharacterized protein LOC10 0.951 0.928 0.358 2e-28
357511227306 hypothetical protein MTR_7g108560 [Medic 0.926 0.866 0.413 2e-28
217071454264 unknown [Medicago truncatula] 0.783 0.848 0.433 7e-28
357478761 416 hypothetical protein MTR_4g119820 [Medic 0.741 0.509 0.361 1e-27
>gi|224132336|ref|XP_002321314.1| predicted protein [Populus trichocarpa] gi|222862087|gb|EEE99629.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 172/300 (57%), Gaps = 49/300 (16%)

Query: 16  LQFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLR 75
           L++QTWVLKV IHCEGCKKKV K+L+ I+GVY   +DS QHKVTV GNVDA+ LIKKL+R
Sbjct: 13  LKYQTWVLKVSIHCEGCKKKVKKVLQSIDGVYKTEVDSHQHKVTVTGNVDAQILIKKLMR 72

Query: 76  SGKHAELWP---EKKDKTSGKSKNNDKQKELSKDGQEV--LDDRHKDT-AEKP------- 122
           SGK+AELWP   E K+KTSGKS+NNDKQK   KD QEV   DD  K+T AEKP       
Sbjct: 73  SGKYAELWPKNSENKEKTSGKSQNNDKQKS-PKDVQEVGGGDDHQKNTPAEKPETEAKIG 131

Query: 123 ------DEKSGDNPPGTGIEGQGGNGSGGKKKKKKK--------GNSSGTGGSGENVGNE 168
                 D+ SG      G+E      +        K          +S  G SG+N G  
Sbjct: 132 GGNGGDDQNSGAESDDGGLESASPVAAAASGGGSGKKKKKKKKPSGNSNNGASGDNSGGV 191

Query: 169 PAAGITGSPAVAAAVDPIPSE--VAPIPRHQQQYPSPPFMQQEHPPMYYPPHPAPLHGVS 226
           PA   TGS ++ A +D  PS   ++  P HQ  YP        +PPMY+   P P++G++
Sbjct: 192 PAD--TGSSSM-ADLDSAPSMSLMSHSPPHQHVYP--------YPPMYH--QPIPVYGIN 238

Query: 227 YNTTYPTASTSYYAPSMHAYYNSSYHRPGRYIPPDPIHKFTEDDHGYYDNDEGTAGCSIM 286
           YNT Y +AS S YA  MHA  +  YH   RY PP P     ++    +++D+   GCS+M
Sbjct: 239 YNTAYCSASESCYAHPMHAQIH--YHHQQRYQPPAPPSDLIKE----FNDDDNETGCSVM 292




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582154|ref|XP_002531871.1| chloroplast-targeted copper chaperone, putative [Ricinus communis] gi|223528479|gb|EEF30508.1| chloroplast-targeted copper chaperone, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224131176|ref|XP_002321019.1| predicted protein [Populus trichocarpa] gi|222861792|gb|EEE99334.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255646288|gb|ACU23628.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356572718|ref|XP_003554513.1| PREDICTED: uncharacterized protein LOC100791626 [Glycine max] Back     alignment and taxonomy information
>gi|225437292|ref|XP_002266955.1| PREDICTED: uncharacterized protein LOC100252094 [Vitis vinifera] gi|297743851|emb|CBI36821.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356505554|ref|XP_003521555.1| PREDICTED: uncharacterized protein LOC100783119 [Glycine max] Back     alignment and taxonomy information
>gi|357511227|ref|XP_003625902.1| hypothetical protein MTR_7g108560 [Medicago truncatula] gi|355500917|gb|AES82120.1| hypothetical protein MTR_7g108560 [Medicago truncatula] Back     alignment and taxonomy information
>gi|217071454|gb|ACJ84087.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357478761|ref|XP_003609666.1| hypothetical protein MTR_4g119820 [Medicago truncatula] gi|355510721|gb|AES91863.1| hypothetical protein MTR_4g119820 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
TAIR|locus:2179604 587 AT5G19090 [Arabidopsis thalian 0.297 0.144 0.584 4.5e-27
TAIR|locus:2180265352 AT5G27690 [Arabidopsis thalian 0.402 0.326 0.487 1.9e-26
TAIR|locus:2011841364 AT1G56210 [Arabidopsis thalian 0.451 0.354 0.431 1.9e-24
TAIR|locus:2082425 473 AT3G06130 [Arabidopsis thalian 0.332 0.200 0.504 5.9e-23
TAIR|locus:2096204 577 AT3G05220 [Arabidopsis thalian 0.234 0.116 0.582 1.2e-20
TAIR|locus:2017709358 AT1G23000 "AT1G23000" [Arabido 0.328 0.262 0.505 8.2e-20
TAIR|locus:2153794262 AT5G37860 "AT5G37860" [Arabido 0.286 0.312 0.477 1.4e-14
TAIR|locus:2202265159 AT1G06330 "AT1G06330" [Arabido 0.283 0.509 0.385 4.9e-14
TAIR|locus:4515103273166 AT3G56891 [Arabidopsis thalian 0.244 0.421 0.414 4.2e-13
TAIR|locus:1005716648178 AT2G18196 [Arabidopsis thalian 0.258 0.415 0.364 1.1e-12
TAIR|locus:2179604 AT5G19090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 248 (92.4 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
 Identities = 52/89 (58%), Positives = 63/89 (70%)

Query:    16 LQFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLR 75
             ++ QT VLKV IHC+GCK+KV KIL+ IEGV+T  ID++  KVTV GNVD   LIKKLL+
Sbjct:     7 MKIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLK 66

Query:    76 SGKHAELWPEKKDKTSGKSKNNDKQKELS 104
             SGKHAE+W   K    G S NN  Q  L+
Sbjct:    67 SGKHAEIWGAPK----GGSNNNQNQPNLA 91


GO:0005576 "extracellular region" evidence=ISM
GO:0005634 "nucleus" evidence=ISM
GO:0030001 "metal ion transport" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0009506 "plasmodesma" evidence=IDA
TAIR|locus:2180265 AT5G27690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011841 AT1G56210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082425 AT3G06130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096204 AT3G05220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017709 AT1G23000 "AT1G23000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153794 AT5G37860 "AT5G37860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202265 AT1G06330 "AT1G06330" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:4515103273 AT3G56891 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1005716648 AT2G18196 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
pfam0040362 pfam00403, HMA, Heavy-metal-associated domain 4e-12
cd0037163 cd00371, HMA, Heavy-metal-associated domain (HMA) 2e-10
COG260871 COG2608, CopZ, Copper chaperone [Inorganic ion tra 3e-05
PLN02957238 PLN02957, PLN02957, copper, zinc superoxide dismut 0.003
>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain Back     alignment and domain information
 Score = 59.9 bits (146), Expect = 4e-12
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 27 IHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVD---AETLIKKLLRSGKH 79
          + C GC KKV K L  + GV +  +D +  KVTV G+ D    E L K + ++G  
Sbjct: 7  MTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAGYE 62


Length = 62

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones Back     alignment and domain information
>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 286
PF0040362 HMA: Heavy-metal-associated domain; InterPro: IPR0 99.31
COG260871 CopZ Copper chaperone [Inorganic ion transport and 99.15
KOG160373 consensus Copper chaperone [Inorganic ion transpor 99.05
KOG4656247 consensus Copper chaperone for superoxide dismutas 98.66
PLN02957238 copper, zinc superoxide dismutase 98.19
PRK10671 834 copA copper exporting ATPase; Provisional 98.1
TIGR0000368 copper ion binding protein. This model describes a 97.91
COG2217 713 ZntA Cation transport ATPase [Inorganic ion transp 97.75
PRK10671 834 copA copper exporting ATPase; Provisional 96.79
KOG0207 951 consensus Cation transport ATPase [Inorganic ion t 96.45
KOG0207 951 consensus Cation transport ATPase [Inorganic ion t 96.35
PRK11033 741 zntA zinc/cadmium/mercury/lead-transporting ATPase 96.33
TIGR0205292 MerP mercuric transport protein periplasmic compon 93.97
cd0037163 HMA Heavy-metal-associated domain (HMA) is a conse 90.97
PRK13748 561 putative mercuric reductase; Provisional 83.97
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures Back     alignment and domain information
Probab=99.31  E-value=9.8e-12  Score=89.87  Aligned_cols=58  Identities=34%  Similarity=0.582  Sum_probs=54.1

Q ss_pred             EEEEe-ecChhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEec---CCHHHHHHHHHHcCCC
Q 023171           22 VLKVL-IHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGN---VDAETLIKKLLRSGKH   79 (286)
Q Consensus        22 ~fkV~-M~C~~Ca~kIEKAL~kI~GV~sV~VDl~t~kVtVtg~---vd~eeIikaIrKaGY~   79 (286)
                      +|+|. |+|.+|+++|+++|.+++||.++.+|+.+++|+|...   ++.++|.++|+++||+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            58998 9999999999999999999999999999999999965   5669999999999994



These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02957 copper, zinc superoxide dismutase Back     alignment and domain information
>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information
>TIGR00003 copper ion binding protein Back     alignment and domain information
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>TIGR02052 MerP mercuric transport protein periplasmic component Back     alignment and domain information
>cd00371 HMA Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
2crl_A98 Copper chaperone for superoxide dismutase; SOD1, f 2e-20
3iwl_A68 Copper transport protein ATOX1; beta-alpha-beta-BE 2e-19
1cc8_A73 Protein (metallochaperone ATX1); copper transport, 9e-17
1qup_A222 Superoxide dismutase 1 copper chaperone; two domai 2e-16
1jk9_B249 CCS, copper chaperone for superoxide dismutase; pr 2e-14
2roe_A66 Heavy metal binding protein; NMR {Thermus thermoph 1e-08
2xmm_A64 SSR2857 protein, ATX1; metal transport, copper hom 2e-08
2k2p_A85 Uncharacterized protein ATU1203; putative metal-bi 3e-07
2kkh_A95 Putative heavy metal transporter; zinc transport, 7e-06
1yg0_A66 COP associated protein; open-faced beta-sandwich, 2e-05
3fry_A73 Probable copper-exporting P-type ATPase A; transpo 3e-05
1p6t_A151 Potential copper-transporting ATPase; COPA, P-type 4e-05
2kt2_A69 Mercuric reductase; nmera, MERA, HMA domain, mercu 5e-05
2qif_A69 Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1e-04
2xmw_A71 PACS-N, cation-transporting ATPase PACS; hydrolase 1e-04
2aj0_A71 Probable cadmium-transporting ATPase; ferrodoxin-l 2e-04
2kyz_A67 Heavy metal binding protein; structural genomics, 4e-04
1m2v_B 926 SEC24, protein transport protein SEC24, SEC24P, SE 4e-04
2l3m_A71 Copper-ION-binding protein; structural genomics, c 7e-04
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98 Back     alignment and structure
 Score = 83.0 bits (205), Expect = 2e-20
 Identities = 16/78 (20%), Positives = 29/78 (37%)

Query: 17 QFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRS 76
             T    V + C+ C   V K L+G+ GV    +  +   V V   + ++ +   L  +
Sbjct: 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGT 76

Query: 77 GKHAELWPEKKDKTSGKS 94
          G+ A L      +     
Sbjct: 77 GRQAVLKGMGSGQLQNSG 94


>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68 Back     alignment and structure
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73 Back     alignment and structure
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222 Back     alignment and structure
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249 Back     alignment and structure
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66 Back     alignment and structure
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64 Back     alignment and structure
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85 Back     alignment and structure
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95 Back     alignment and structure
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66 Back     alignment and structure
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73 Back     alignment and structure
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151 Back     alignment and structure
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69 Back     alignment and structure
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69 Back     alignment and structure
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71 Back     alignment and structure
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71 Back     alignment and structure
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67 Back     alignment and structure
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 Back     alignment and structure
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
3iwl_A68 Copper transport protein ATOX1; beta-alpha-beta-BE 99.39
4a4j_A69 Pacszia, cation-transporting ATPase PACS; hydrolas 99.35
3dxs_X74 Copper-transporting ATPase RAN1; CXXC motif, ferre 99.33
1cc8_A73 Protein (metallochaperone ATX1); copper transport, 99.32
3fry_A73 Probable copper-exporting P-type ATPase A; transpo 99.27
2crl_A98 Copper chaperone for superoxide dismutase; SOD1, f 99.25
2xmm_A64 SSR2857 protein, ATX1; metal transport, copper hom 99.18
2l3m_A71 Copper-ION-binding protein; structural genomics, c 99.14
2roe_A66 Heavy metal binding protein; NMR {Thermus thermoph 99.13
2xmw_A71 PACS-N, cation-transporting ATPase PACS; hydrolase 99.13
1osd_A72 MERP, hypothetical protein MERP; mercury resistanc 99.11
1aw0_A72 Menkes copper-transporting ATPase; copper-binding 99.1
2qif_A69 Copper chaperone COPZ; tetranuclear Cu(I) cluster; 99.1
2k2p_A85 Uncharacterized protein ATU1203; putative metal-bi 99.08
1mwy_A73 ZNTA; open-faced beta-sandwich fold, beta-alpha-be 99.08
3cjk_B75 Copper-transporting ATPase 1; HAH1, ATP7B, menkes 99.08
2g9o_A90 Copper-transporting ATPase 1; menkes disease, solu 99.05
1y3j_A77 Copper-transporting ATPase 1; ferrodoxin-like fold 99.05
1q8l_A84 Copper-transporting ATPase 1; metal binding protei 99.05
1cpz_A68 Protein (COPZ); copper chaperone, metal transport, 99.05
1kvi_A79 Copper-transporting ATPase 1; menkes, Cu-protein, 99.05
1opz_A76 Potential copper-transporting ATPase; mutation, fo 99.04
2kt2_A69 Mercuric reductase; nmera, MERA, HMA domain, mercu 99.04
1fvq_A72 Copper-transporting ATPase; APO-CCC2A, hydrolase; 99.03
1yg0_A66 COP associated protein; open-faced beta-sandwich, 99.03
2kyz_A67 Heavy metal binding protein; structural genomics, 99.02
2ldi_A71 Zinc-transporting ATPase; metal homeostasis, metal 99.0
1jww_A80 Potential copper-transporting ATPase; beta-alpha-b 99.0
1yjr_A75 Copper-transporting ATPase 1; metallochaperone, pr 98.99
2ew9_A149 Copper-transporting ATPase 2; copper trafficking, 98.94
1p6t_A151 Potential copper-transporting ATPase; COPA, P-type 98.93
2ofg_X111 Zinc-transporting ATPase; ferredoxin-like fold, be 98.92
2kkh_A95 Putative heavy metal transporter; zinc transport, 98.89
1qup_A222 Superoxide dismutase 1 copper chaperone; two domai 98.87
2aj0_A71 Probable cadmium-transporting ATPase; ferrodoxin-l 98.86
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 98.8
1jk9_B249 CCS, copper chaperone for superoxide dismutase; pr 98.74
2ew9_A149 Copper-transporting ATPase 2; copper trafficking, 98.69
1p6t_A151 Potential copper-transporting ATPase; COPA, P-type 98.41
2rop_A202 Copper-transporting ATPase 2; wilson protein, mobi 98.4
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 98.3
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Back     alignment and structure
Probab=99.39  E-value=6.4e-13  Score=95.34  Aligned_cols=66  Identities=26%  Similarity=0.442  Sum_probs=61.4

Q ss_pred             eEEEEEEeecChhHHHHHHHHHhcCCCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCCCccCCc
Q 023171           19 QTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRSGKHAELWPE   85 (286)
Q Consensus        19 ~tv~fkV~M~C~~Ca~kIEKAL~kI~GV~sV~VDl~t~kVtVtg~vd~eeIikaIrKaGY~Aeil~~   85 (286)
                      .+++|.|.|+|.+|+.+|+++|.+++|| .+.+|+.+++++|.+.++.++|+++|+++||.+.++..
T Consensus         2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~   67 (68)
T 3iwl_A            2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL   67 (68)
T ss_dssp             CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred             ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence            4677888999999999999999999999 99999999999999999999999999999999987643



>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A Back     alignment and structure
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0 Back     alignment and structure
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Back     alignment and structure
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Back     alignment and structure
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Back     alignment and structure
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Back     alignment and structure
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Back     alignment and structure
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Back     alignment and structure
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Back     alignment and structure
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Back     alignment and structure
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Back     alignment and structure
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Back     alignment and structure
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Back     alignment and structure
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Back     alignment and structure
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Back     alignment and structure
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Back     alignment and structure
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Back     alignment and structure
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Back     alignment and structure
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Back     alignment and structure
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Back     alignment and structure
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Back     alignment and structure
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Back     alignment and structure
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Back     alignment and structure
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Back     alignment and structure
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Back     alignment and structure
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Back     alignment and structure
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Back     alignment and structure
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Back     alignment and structure
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Back     alignment and structure
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Back     alignment and structure
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Back     alignment and structure
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Back     alignment and structure
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Back     alignment and structure
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Back     alignment and structure
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 286
d1qupa272 d.58.17.1 (A:2-73) Copper chaperone for superoxide 3e-15
d1cc8a_72 d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX 1e-14
d1fe0a_66 d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX 2e-13
d1osda_72 d.58.17.1 (A:) Mercuric ion binding protein MerP { 1e-11
d1sb6a_64 d.58.17.1 (A:) Copper chaperone {Synechocystis sp. 4e-11
d2ggpb172 d.58.17.1 (B:1-72) Copper transporter domain ccc2a 5e-11
d2aw0a_72 d.58.17.1 (A:) Menkes copper-transporting ATPase { 9e-10
d1p6ta279 d.58.17.1 (A:73-151) Potential copper-translocatin 1e-09
d1cpza_68 d.58.17.1 (A:) Copper chaperone {Enterococcus hira 5e-09
d1p6ta172 d.58.17.1 (A:1-72) Potential copper-translocating 1e-08
d1kvja_79 d.58.17.1 (A:) Menkes copper-transporting ATPase { 2e-08
d1mwza_73 d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, 4e-08
d2qifa169 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt 5e-08
d1q8la_84 d.58.17.1 (A:) Menkes copper-transporting ATPase { 1e-05
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 Score = 66.7 bits (163), Expect = 3e-15
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 18 FQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRSG 77
          ++     + +HCE C   +   LK + G+ +   D +Q  ++V  +V   T+I  L   G
Sbjct: 6  YEA-TYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCG 64

Query: 78 KHAELW 83
          K A + 
Sbjct: 65 KDAIIR 70


>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66 Back     information, alignment and structure
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72 Back     information, alignment and structure
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64 Back     information, alignment and structure
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 Back     information, alignment and structure
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72 Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79 Back     information, alignment and structure
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68 Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72 Back     information, alignment and structure
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79 Back     information, alignment and structure
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73 Back     information, alignment and structure
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69 Back     information, alignment and structure
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
d1cc8a_72 ATX1 metallochaperone protein (ATOX1) {Baker's yea 99.54
d1fe0a_66 ATX1 metallochaperone protein (ATOX1) {Human (Homo 99.54
d1qupa272 Copper chaperone for superoxide dismutase, N-termi 99.54
d2ggpb172 Copper transporter domain ccc2a {Baker's yeast (Sa 99.44
d1sb6a_64 Copper chaperone {Synechocystis sp. pcc 6803, Scat 99.44
d1osda_72 Mercuric ion binding protein MerP {Ralstonia metal 99.42
d1cpza_68 Copper chaperone {Enterococcus hirae [TaxId: 1354] 99.4
d2qifa169 Copper chaperone {Bacillus subtilis, CopZ [TaxId: 99.4
d2aw0a_72 Menkes copper-transporting ATPase {Human (Homo sap 99.4
d1kvja_79 Menkes copper-transporting ATPase {Human (Homo sap 99.4
d1q8la_84 Menkes copper-transporting ATPase {Human (Homo sap 99.38
d1p6ta279 Potential copper-translocating P-type ATPase CopA 99.36
d1p6ta172 Potential copper-translocating P-type ATPase CopA 99.35
d1mwza_73 Metal ion-transporting ATPase ZntA, N-terminal dom 99.34
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.54  E-value=1.1e-14  Score=107.82  Aligned_cols=65  Identities=22%  Similarity=0.482  Sum_probs=61.5

Q ss_pred             CceEEEEEEeecChhHHHHHHHHHhcC-CCeeEEEEecCCcEEEEEecCCHHHHHHHHHHcCCCCc
Q 023171           17 QFQTWVLKVLIHCEGCKKKVTKILKGI-EGVYTAVIDSQQHKVTVIGNVDAETLIKKLLRSGKHAE   81 (286)
Q Consensus        17 k~~tv~fkV~M~C~~Ca~kIEKAL~kI-~GV~sV~VDl~t~kVtVtg~vd~eeIikaIrKaGY~Ae   81 (286)
                      ++++++|+|+|+|.+|+++|+++|.++ +||.++.||+.+++|+|.+.+++++|+++|+++||.+.
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~   67 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR   67 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccC
Confidence            467899999999999999999999999 59999999999999999999999999999999999874



>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Back     information, alignment and structure
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Back     information, alignment and structure
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Back     information, alignment and structure
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Back     information, alignment and structure
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Back     information, alignment and structure
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure