Citrus Sinensis ID: 023172

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
MATTTSLAFSSSSLHNRYHKRTTFFNGSAASFNRIGVRRSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTSSN
cccccccccccccccccccccHHHHHHHHccccccccccccccccccEEEcccccccccccccccccccccEEEEcccccHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccEEccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHcccHHHHHHHHHHHHHHcccccEEEEEcccccccEEEEccHHHHHHHHHHHHHccccccccccccccccccccccccc
cccHHHHHHHHHccccHHHHHEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccccccccccEEEEEEccccccccccHHHHHccHHHHHHHHHHHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHHcccccEEEEEEEcccccEEEEccHHHHHHHHHHHHHccccEEEEEcccccccccccccccc
matttslafsssslhnryhkrttffngsaasfnrIGVRRSLARSGVFMSVSVGkhtavtvddalfadykptnaflfpgqgaqavgmgkeaqsVPAAAELYKKANDILGFDLleictngpkekldstiisqpaiYVTSLAAVELLRARdggqqiidsvdvtcglslGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIAnylcpgnyavsggvKGIEAVEAKAKSFKARMTVISSficipiqchpctssn
matttslafsssslhnryhkrttffngsaasfnrIGVRRSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFicipiqchpctssn
MatttslafsssslHNRYHKRTTFFNGSAASFNRIGVRRSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTSSN
*****************YHKRTTFFNGSAASFNRIGVRRSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQGAQAVGMGK***SVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPC****
*********************************************************************PTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTS**
************SLHNRYHKRTTFFNGSAASFNRIGVRRSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQGAQ**********VPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAA********KGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTSSN
**TTTSLAFSSSSLHNRYHKRTTFFNGSAASFNRIGVRRSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIP**********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATTTSLAFSSSSLHNRYHKRTTFFNGSAASFNRIGVRRSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCTSSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query286 2.2.26 [Sep-21-2011]
Q8R3F5 381 Malonyl-CoA-acyl carrier yes no 0.678 0.509 0.395 2e-35
Q8T3L6379 Probable malonyl-CoA-acyl yes no 0.667 0.503 0.421 3e-35
Q8IVS2 390 Malonyl-CoA-acyl carrier yes no 0.678 0.497 0.395 9e-35
P71019 317 Malonyl CoA-acyl carrier yes no 0.653 0.589 0.416 2e-32
P43712 312 Malonyl CoA-acyl carrier yes no 0.583 0.535 0.392 1e-26
P0AAI9309 Malonyl CoA-acyl carrier N/A no 0.601 0.556 0.373 6e-26
P0AAJ0309 Malonyl CoA-acyl carrier yes no 0.601 0.556 0.373 6e-26
Q8X8I7309 Malonyl CoA-acyl carrier N/A no 0.601 0.556 0.373 9e-26
O85140309 Malonyl CoA-acyl carrier yes no 0.601 0.556 0.368 1e-25
P73242293 Malonyl CoA-acyl carrier N/A no 0.660 0.645 0.379 2e-24
>sp|Q8R3F5|FABD_MOUSE Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus GN=Mcat PE=2 SV=3 Back     alignment and function desciption
 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 113/200 (56%), Gaps = 6/200 (3%)

Query: 72  NAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQP 131
           +  LFPGQG QAVGMG     +P   +LY+ A+ +LG+DLLE+C  GP+E LD T+  QP
Sbjct: 61  SVLLFPGQGCQAVGMGSGLLHLPRVRQLYEAAHRVLGYDLLELCLRGPQEDLDRTVHCQP 120

Query: 132 AIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGA 191
           A++V SLAAVE L        +ID+     G S+GE+ AL FAGA  F +GL  VK R  
Sbjct: 121 AVFVASLAAVEKLHHLQPA--VIDNCVAAAGFSVGEFAALVFAGAMDFSEGLYAVKARAE 178

Query: 192 AMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVD----EDNKVQIANYLCPGNYAVSG 247
           AMQEA++A    M+S++G         C  A +       E+   Q++NYL P    +SG
Sbjct: 179 AMQEASEAVPSGMLSVLGQRQSNFSFACLEAQEHCKSLGIENPVCQVSNYLFPDCRVISG 238

Query: 248 GVKGIEAVEAKAKSFKARMT 267
            ++ ++ +   +  +  R T
Sbjct: 239 HLEALQFLRRNSAKYHFRRT 258
Catalyzes the transfer of a malonyl moiety from malonyl-CoA to the free thiol group of the phosphopantetheine arm of the mitochondrial ACP protein (NDUFAB1). This suggests the existence of the biosynthesis of fatty acids in mitochondrias.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q8T3L6|FABD_DROME Probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Drosophila melanogaster GN=beg PE=2 SV=2 Back     alignment and function description
>sp|Q8IVS2|FABD_HUMAN Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Homo sapiens GN=MCAT PE=1 SV=2 Back     alignment and function description
>sp|P71019|FABD_BACSU Malonyl CoA-acyl carrier protein transacylase OS=Bacillus subtilis (strain 168) GN=fabD PE=3 SV=2 Back     alignment and function description
>sp|P43712|FABD_HAEIN Malonyl CoA-acyl carrier protein transacylase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fabD PE=3 SV=1 Back     alignment and function description
>sp|P0AAI9|FABD_ECOLI Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli (strain K12) GN=fabD PE=1 SV=2 Back     alignment and function description
>sp|P0AAJ0|FABD_ECOL6 Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabD PE=3 SV=2 Back     alignment and function description
>sp|Q8X8I7|FABD_ECO57 Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli O157:H7 GN=fabD PE=3 SV=3 Back     alignment and function description
>sp|O85140|FABD_SALTY Malonyl CoA-acyl carrier protein transacylase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fabD PE=1 SV=3 Back     alignment and function description
>sp|P73242|FABD_SYNY3 Malonyl CoA-acyl carrier protein transacylase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabD PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
255550619 400 Malonyl-CoA : ACP Acyltransferase (MCAAT 0.912 0.652 0.787 1e-114
224103857371 predicted protein [Populus trichocarpa] 0.898 0.692 0.796 1e-113
225434451 392 PREDICTED: malonyl-CoA-acyl carrier prot 0.912 0.665 0.794 1e-113
449455001365 PREDICTED: malonyl-CoA-acyl carrier prot 0.846 0.663 0.832 1e-112
380853856 404 acyl-carrier-protein S-malonyltransferas 0.807 0.571 0.843 1e-111
210110272386 malonyl-CoA:ACP transacylase 1-3 [Arachi 0.828 0.613 0.806 1e-108
193290714384 putative acyl-carrier-protein S-malonylt 0.828 0.617 0.829 1e-108
210110182385 malonyl-CoA:ACP transacylase 1-2 [Arachi 0.828 0.615 0.806 1e-108
210110180385 malonyl-CoA:ACP transacylase 1-1 [Arachi 0.828 0.615 0.798 1e-107
351723705344 malonyltransferase [Glycine max] gi|8261 0.783 0.651 0.831 1e-104
>gi|255550619|ref|XP_002516359.1| Malonyl-CoA : ACP Acyltransferase (MCAAT) [Ricinus communis] gi|223544525|gb|EEF46043.1| Malonyl-CoA : ACP Acyltransferase (MCAAT) [Ricinus communis] Back     alignment and taxonomy information
 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/273 (78%), Positives = 236/273 (86%), Gaps = 12/273 (4%)

Query: 1   MATTTSLAFSSSSLHNRYHKRTTFFNGSAASFNRIGVR----RSLARSGVFMSVSVGKHT 56
           MA+ +SLA  S+SL      R   F  S+ SFN+ G+R    ++L RS VFMSVSVG  T
Sbjct: 28  MASCSSLALPSASL------RALSF-ASSDSFNKNGIRAFGIKNLGRSKVFMSVSVGSQT 80

Query: 57  -AVTVDDALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEIC 115
             V  DDALF DYKP  AFLFPGQGAQAVGMGK+AQSVPAA  L+KKANDILG+DLLE+C
Sbjct: 81  IGVVDDDALFKDYKPNYAFLFPGQGAQAVGMGKDAQSVPAAVNLFKKANDILGYDLLELC 140

Query: 116 TNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175
           T+GPKEKLDST+ISQPAIYVTSLAAVE+L ARDGGQ+IIDSVDVTCGLSLGEYTALAFAG
Sbjct: 141 TSGPKEKLDSTLISQPAIYVTSLAAVEVLHARDGGQEIIDSVDVTCGLSLGEYTALAFAG 200

Query: 176 AFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVDEDNKVQIA 235
           AFSFEDGLKLVKLRG AMQEAADAAK AMVS+IGLDS+KVQQLCDAAN+EVDE N+VQIA
Sbjct: 201 AFSFEDGLKLVKLRGQAMQEAADAAKSAMVSVIGLDSEKVQQLCDAANEEVDEANRVQIA 260

Query: 236 NYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTV 268
           NYLCPGNYAVSGGVKG+EAVEAKAKSFKARMTV
Sbjct: 261 NYLCPGNYAVSGGVKGVEAVEAKAKSFKARMTV 293

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224103857|ref|XP_002313221.1| predicted protein [Populus trichocarpa] gi|222849629|gb|EEE87176.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225434451|ref|XP_002273446.1| PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial [Vitis vinifera] Back     alignment and taxonomy information
>gi|449455001|ref|XP_004145242.1| PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like [Cucumis sativus] gi|449471626|ref|XP_004153364.1| PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like [Cucumis sativus] gi|449514565|ref|XP_004164413.1| PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|380853856|gb|AFE88235.1| acyl-carrier-protein S-malonyltransferase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|210110272|gb|ACJ07139.1| malonyl-CoA:ACP transacylase 1-3 [Arachis hypogaea] Back     alignment and taxonomy information
>gi|193290714|gb|ACF17665.1| putative acyl-carrier-protein S-malonyltransferase/ transferase [Capsicum annuum] Back     alignment and taxonomy information
>gi|210110182|gb|ACJ07138.1| malonyl-CoA:ACP transacylase 1-2 [Arachis hypogaea] Back     alignment and taxonomy information
>gi|210110180|gb|ACJ07137.1| malonyl-CoA:ACP transacylase 1-1 [Arachis hypogaea] Back     alignment and taxonomy information
>gi|351723705|ref|NP_001238312.1| malonyltransferase [Glycine max] gi|82618886|gb|ABB85235.1| malonyltransferase [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
TAIR|locus:2060884393 EMB3147 "EMBRYO DEFECTIVE 3147 0.800 0.582 0.852 8.2e-99
MGI|MGI:2388651 381 Mcat "malonyl CoA:ACP acyltran 0.678 0.509 0.4 4.6e-34
FB|FBgn0036691379 beg "bad egg" [Drosophila mela 0.685 0.517 0.431 7.4e-34
RGD|1306698 380 Mcat "malonyl CoA:ACP acyltran 0.678 0.510 0.4 1.2e-33
UNIPROTKB|Q8IVS2 390 MCAT "Malonyl-CoA-acyl carrier 0.678 0.497 0.4 2e-33
UNIPROTKB|F1PUF5 384 MCAT "Uncharacterized protein" 0.678 0.505 0.39 1.1e-32
UNIPROTKB|E1BPG0 387 MCAT "Uncharacterized protein" 0.678 0.501 0.39 1.4e-32
UNIPROTKB|F1SJS0 384 LOC100523602 "Uncharacterized 0.678 0.505 0.39 2.9e-32
TIGR_CMR|GSU_1602307 GSU_1602 "malonyl CoA-acyl car 0.660 0.615 0.406 4.7e-32
WB|WBGene00016812 411 C50D2.9 [Caenorhabditis elegan 0.664 0.462 0.364 6.9e-31
TAIR|locus:2060884 EMB3147 "EMBRYO DEFECTIVE 3147" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
 Identities = 196/230 (85%), Positives = 213/230 (92%)

Query:    39 RSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAE 98
             ++L+RS + MSVS G  +  TV D+LFADYKPT+AFLFPGQGAQAVGMGKE+QSV AA E
Sbjct:    58 KNLSRSRISMSVSAGSQST-TVHDSLFADYKPTSAFLFPGQGAQAVGMGKESQSVGAAGE 116

Query:    99 LYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVD 158
             LYKKANDILG+DLL+IC NGPKEKLDST+ISQPAIYVTSLAAVELLR R+GG+QII+SVD
Sbjct:   117 LYKKANDILGYDLLDICVNGPKEKLDSTVISQPAIYVTSLAAVELLRVREGGEQIINSVD 176

Query:   159 VTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQL 218
             VTCGLSLGEYTALAFAGAFSFEDGLKLVKLRG AMQ AADAAK AMVSIIGLDS+KVQQL
Sbjct:   177 VTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGEAMQAAADAAKSAMVSIIGLDSEKVQQL 236

Query:   219 CDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTV 268
             CDAANQEVDE +KVQIANYLCPGNYAVSGG+KGIE VEAKAKSFKARMTV
Sbjct:   237 CDAANQEVDEADKVQIANYLCPGNYAVSGGLKGIEVVEAKAKSFKARMTV 286
GO:0003824 "catalytic activity" evidence=IEA
GO:0004314 "[acyl-carrier-protein
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016740 "transferase activity" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0006744 "ubiquinone biosynthetic process" evidence=RCA
MGI|MGI:2388651 Mcat "malonyl CoA:ACP acyltransferase (mitochondrial)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0036691 beg "bad egg" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|1306698 Mcat "malonyl CoA:ACP acyltransferase (mitochondrial)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IVS2 MCAT "Malonyl-CoA-acyl carrier protein transacylase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PUF5 MCAT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BPG0 MCAT "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SJS0 LOC100523602 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1602 GSU_1602 "malonyl CoA-acyl carrier protein transacylase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
WB|WBGene00016812 C50D2.9 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!
3rd Layer2.3.1.39LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
PLN02752343 PLN02752, PLN02752, [acyl-carrier protein] S-malon 1e-139
COG0331310 COG0331, FabD, (acyl-carrier-protein) S-malonyltra 4e-67
TIGR00128290 TIGR00128, fabD, malonyl CoA-acyl carrier protein 8e-56
TIGR03131295 TIGR03131, malonate_mdcH, malonate decarboxylase, 3e-32
smart00827298 smart00827, PKS_AT, Acyl transferase domain in pol 3e-29
COG3321 1061 COG3321, COG3321, Polyketide synthase modules and 2e-21
pfam00698 319 pfam00698, Acyl_transf_1, Acyl transferase domain 3e-20
TIGR02813 2582 TIGR02813, omega_3_PfaA, polyketide-type polyunsat 2e-12
>gnl|CDD|215401 PLN02752, PLN02752, [acyl-carrier protein] S-malonyltransferase Back     alignment and domain information 
 Score =  396 bits (1018), Expect = e-139
 Identities = 178/231 (77%), Positives = 193/231 (83%), Gaps = 2/231 (0%)

Query: 39  RSLARSGVFMSVSVGKHTAVTVDDALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAE 98
           R  + S V MSVSVG        DALFADYKPT AFLFPGQGAQAVGMGKEA  VPAA  
Sbjct: 9   RRASASRVSMSVSVGSQATA--ADALFADYKPTTAFLFPGQGAQAVGMGKEAAEVPAAKA 66

Query: 99  LYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVD 158
           L+ KA++ILG+DLL++C NGPKEKLDST++SQPAIYV SLAAVE LRARDGGQ +IDSVD
Sbjct: 67  LFDKASEILGYDLLDVCVNGPKEKLDSTVVSQPAIYVASLAAVEKLRARDGGQAVIDSVD 126

Query: 159 VTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQL 218
           V  GLSLGEYTAL FAGA SFEDGLKLVKLRG AMQ AADA    MVS+IGLDSDKVQ+L
Sbjct: 127 VCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAADAGPSGMVSVIGLDSDKVQEL 186

Query: 219 CDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVI 269
           C AAN+EV ED+ VQIANYLCPGNYAVSGG KGI+AVEAKAKSFKARMTV 
Sbjct: 187 CAAANEEVGEDDVVQIANYLCPGNYAVSGGKKGIDAVEAKAKSFKARMTVR 237

Length = 343
>gnl|CDD|223408 COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|232839 TIGR00128, fabD, malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>gnl|CDD|132175 TIGR03131, malonate_mdcH, malonate decarboxylase, epsilon subunit Back     alignment and domain information
>gnl|CDD|214838 smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|144338 pfam00698, Acyl_transf_1, Acyl transferase domain Back     alignment and domain information
>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 286
PLN02752343 [acyl-carrier protein] S-malonyltransferase 100.0
PF00698 318 Acyl_transf_1: Acyl transferase domain; InterPro: 100.0
COG0331310 FabD (acyl-carrier-protein) S-malonyltransferase [ 100.0
TIGR00128290 fabD malonyl CoA-acyl carrier protein transacylase 100.0
TIGR03131295 malonate_mdcH malonate decarboxylase, epsilon subu 100.0
smart00827298 PKS_AT Acyl transferase domain in polyketide synth 100.0
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 100.0
TIGR02816 538 pfaB_fam PfaB family protein. The protein PfaB is 100.0
COG3321 1061 Polyketide synthase modules and related proteins [ 100.0
KOG2926 386 consensus Malonyl-CoA:ACP transacylase [Lipid tran 100.0
KOG1202 2376 consensus Animal-type fatty acid synthase and rela 100.0
cd07198172 Patatin Patatin-like phospholipase. Patatin is a s 92.36
cd07205175 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholi 90.08
cd07207194 Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho 89.92
cd07209215 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin sim 88.86
cd07210221 Pat_hypo_W_succinogenes_WS1459_like Hypothetical p 88.55
COG1752 306 RssA Predicted esterase of the alpha-beta hydrolas 88.54
cd07223 405 Pat_PNPLA5-mammals Patatin-like phospholipase doma 88.0
cd07227 269 Pat_Fungal_NTE1 Fungal patatin-like phospholipase 87.49
cd07225 306 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai 86.99
cd07228175 Pat_NTE_like_bacteria Bacterial patatin-like phosp 86.17
cd07229 391 Pat_TGL3_like Triacylglycerol lipase 3. Triacylgly 84.86
PRK10279 300 hypothetical protein; Provisional 83.2
cd07224233 Pat_like Patatin-like phospholipase. Patatin-like 82.51
cd07218245 Pat_iPLA2 Calcium-independent phospholipase A2; Cl 80.94
cd07204243 Pat_PNPLA_like Patatin-like phospholipase domain c 80.42
>PLN02752 [acyl-carrier protein] S-malonyltransferase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-42  Score=318.50  Aligned_cols=218  Identities=77%  Similarity=1.125  Sum_probs=192.1

Q ss_pred             cccCCCCcEEEEecCCCCcccccchhhhccHHHHHHHHHHHHHcCCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHHHH
Q 023172           64 LFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVEL  143 (286)
Q Consensus        64 ~~~~~~~~~~fvF~Gqg~~~~~m~~~~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~~~  143 (286)
                      ......+|++|+|||||+||+||+++|..+|.|++.+++|++++|+++.+++...+.+.+.++.++||+||++|++++++
T Consensus        32 ~~~~~~~~~a~lFpGQGsq~~gm~~~~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~l~~~~~~qp~i~~~~~a~~~~  111 (343)
T PLN02752         32 LFADYKPTTAFLFPGQGAQAVGMGKEAAEVPAAKALFDKASEILGYDLLDVCVNGPKEKLDSTVVSQPAIYVASLAAVEK  111 (343)
T ss_pred             cccCCCCCEEEEECCCCcchhhHHHHHHhCHHHHHHHHHHHHHhCCCHHHHHhcCCHHHHhcchhhhHHHHHHHHHHHHH
Confidence            34567889999999999999999999989999999999999999999999988766666788999999999999999999


Q ss_pred             HHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCcEEEEeCCCHHHHHHHHHHhc
Q 023172          144 LRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAAN  223 (286)
Q Consensus       144 l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~mlaV~~~~~~~~~~~l~~~~  223 (286)
                      |+++|....++.+|++++|||+|||+|+|++|+++++|+++++..|+++|++.....+++|++|.+++.++++++++.++
T Consensus       112 l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ls~e~al~lv~~R~~~m~~~~~~~~g~m~av~g~~~~~~~~~l~~~~  191 (343)
T PLN02752        112 LRARDGGQAVIDSVDVCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAADAGPSGMVSVIGLDSDKVQELCAAAN  191 (343)
T ss_pred             HHhcCCCcccccCCCeeeeccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhccCCCccEEEEeCCCHHHHHHHHHHhh
Confidence            99998211111246789999999999999999999999999999999999987555689999998999999999998876


Q ss_pred             ccCCCCCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCC
Q 023172          224 QEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPC  282 (286)
Q Consensus       224 ~~~~~~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~  282 (286)
                      ...+....++|+++|+|+++||||+++.++++.+.+++.+.++.++|+++ .|||||++
T Consensus       192 ~~~~~~~~v~IA~~Nsp~~~vIsG~~~~l~~l~~~l~~~~~~~~~~L~v~-~pfHsp~m  249 (343)
T PLN02752        192 EEVGEDDVVQIANYLCPGNYAVSGGKKGIDAVEAKAKSFKARMTVRLAVA-GAFHTSFM  249 (343)
T ss_pred             hccCCCCeEEEEEEcCCCCEEEECcHHHHHHHHHHHHhcCCceEEECCCC-CCcchHHH
Confidence            54333457999999999999999999999999999998776688999999 99999965

>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2 Back     alignment and domain information
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] Back     alignment and domain information
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase Back     alignment and domain information
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit Back     alignment and domain information
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>TIGR02816 pfaB_fam PfaB family protein Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG2926 consensus Malonyl-CoA:ACP transacylase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>cd07198 Patatin Patatin-like phospholipase Back     alignment and domain information
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1 Back     alignment and domain information
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2 Back     alignment and domain information
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli Back     alignment and domain information
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes Back     alignment and domain information
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] Back     alignment and domain information
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5 Back     alignment and domain information
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6 Back     alignment and domain information
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7 Back     alignment and domain information
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6 Back     alignment and domain information
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3 Back     alignment and domain information
>PRK10279 hypothetical protein; Provisional Back     alignment and domain information
>cd07224 Pat_like Patatin-like phospholipase Back     alignment and domain information
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2 Back     alignment and domain information
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
2c2n_A339 Structure Of Human Mitochondrial Malonyltransferase 3e-36
3ptw_A 336 Crystal Structure Of Malonyl Coa-Acyl Carrier Prote 2e-29
2g1h_A308 Structure Of E.Coli Fabd Complexed With Glycerol Le 5e-27
1mla_A309 The Escherichia Coli Malonyl-Coa:acyl Carrier Prote 5e-27
3im8_A307 Crystal Structure Of Mcat From Streptococcus Pneumo 2e-25
3qat_A 318 Crystal Structure Of Acyl-Carrier-Protein-S-Malonyl 2e-25
3im9_A316 Crystal Structure Of Mcat From Staphylococcus Aureu 5e-25
3ezo_A 318 Crystal Structure Of Acyl-Carrier-Protein S- Malony 5e-25
3k89_A 314 Structure Of X. Oryzae Pv. Oryzae Kacc10331, Xoo088 3e-24
3h0p_A312 2.0 Angstrom Crystal Structure Of An Acyl Carrier P 4e-24
3rgi_A286 Trans-Acting Transferase From Disorazole Synthase L 8e-24
3sbm_A281 Trans-Acting Transferase From Disorazole Synthase I 9e-24
3tqe_A 316 Structure Of The Malonyl Coa-Acyl Carrier Protein T 6e-23
3g87_A 394 Crystal Structure Of Malonyl Coa-Acyl Carrier Prote 3e-21
3hjv_A312 1.7 Angstrom Resolution Crystal Structure Of An Acy 6e-21
2cuy_A 305 Crystal Structure Of Malonyl Coa-acyl Carrier Prote 8e-20
2h1y_A 321 Crystal Structure Of Malonyl-Coa:acyl Carrier Prote 1e-18
3zen_D 3089 Cryo-em Structure Of The Mycobacterial Fatty Acid S 9e-12
2cdh_4305 Architecture Of The Thermomyces Lanuginosus Fungal 1e-09
2cf2_B304 Architecture Of Mammalian Fatty Acid Synthase Lengt 1e-09
1nm2_A317 "malonyl-Coa:acp Transacylase" Length = 317 1e-09
2qj3_A322 Mycobacterium Tuberculosis Fabd Length = 322 1e-07
2qc3_A303 Crystal Structure Of Mcat From Mycobacterium Tuberc 1e-07
4amn_A 421 Crystal Structure Of The Acyltransferase Domain Of 7e-07
4amm_A 401 Crystal Structure Of The Acyltransferase Domain Of 8e-07
4amo_A 421 Crystal Structure Of The Acyltransferase Domain Of 1e-06
2qo3_A 915 Crystal Structure Of [ks3][at3] Didomain From Modul 4e-06
2vkz_G 2051 Structure Of The Cerulenin-Inhibited Fungal Fatty A 1e-05
2uva_G 2060 Crystal Structure Of Fatty Acid Synthase From Therm 1e-04
>pdb|2C2N|A Chain A, Structure Of Human Mitochondrial Malonyltransferase Length = 339 Back     alignment and structure 
Iteration: 1

 Score =  148 bits (374), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 61  DDALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPK 120
           ++  F      +  LFPGQG+Q VGMG+   + P   ELY  A  +LG+DLLE+  +GP+
Sbjct: 16  ENLYFQSMGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQ 75
Query: 121 EKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFE 180
           E LD T+  QPAI+V SLAAVE L        +I++     G S+GE+ AL FAGA  F 
Sbjct: 76  ETLDRTVHCQPAIFVASLAAVEKLHHLQ--PSVIENCVAAAGFSVGEFAALVFAGAMEFA 133
Query: 181 DGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVD----EDNKVQIAN 236
           +GL  VK+R  AMQEA++A    M+S++G    K    C  A +       E+   +++N
Sbjct: 134 EGLYAVKIRAEAMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPVCEVSN 193
Query: 237 YLCPGNYAVSGGVKGIEAVEAKAKSFKARMT 267
           YL P    +SG  + +  ++  +  F  R T
Sbjct: 194 YLFPDCRVISGHQEALRFLQKNSSKFHFRRT 224
>pdb|3PTW|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein Transacylase From Clostridium Perfringens Atcc 13124 Length = 336 Back     alignment and structure
>pdb|2G1H|A Chain A, Structure Of E.Coli Fabd Complexed With Glycerol Length = 308 Back     alignment and structure
>pdb|1MLA|A Chain A, The Escherichia Coli Malonyl-Coa:acyl Carrier Protein Transacylase At 1.5-Angstroms Resolution. Crystal Structure Of A Fatty Acid Synthase Component Length = 309 Back     alignment and structure
>pdb|3IM8|A Chain A, Crystal Structure Of Mcat From Streptococcus Pneumoniae Length = 307 Back     alignment and structure
>pdb|3QAT|A Chain A, Crystal Structure Of Acyl-Carrier-Protein-S-Malonyltransferase From Bartonella Henselae Length = 318 Back     alignment and structure
>pdb|3IM9|A Chain A, Crystal Structure Of Mcat From Staphylococcus Aureus Length = 316 Back     alignment and structure
>pdb|3EZO|A Chain A, Crystal Structure Of Acyl-Carrier-Protein S- Malonyltransferase From Burkholderia Pseudomallei 1710b Length = 318 Back     alignment and structure
>pdb|3K89|A Chain A, Structure Of X. Oryzae Pv. Oryzae Kacc10331, Xoo0880(Fabd) Complexed With Glycerol Length = 314 Back     alignment and structure
>pdb|3H0P|A Chain A, 2.0 Angstrom Crystal Structure Of An Acyl Carrier Protein S- Malonyltransferase From Salmonella Typhimurium. Length = 312 Back     alignment and structure
>pdb|3RGI|A Chain A, Trans-Acting Transferase From Disorazole Synthase Length = 286 Back     alignment and structure
>pdb|3SBM|A Chain A, Trans-Acting Transferase From Disorazole Synthase In Complex With Acetate Length = 281 Back     alignment and structure
>pdb|3TQE|A Chain A, Structure Of The Malonyl Coa-Acyl Carrier Protein Transacylase (Fabd) From Coxiella Burnetii Length = 316 Back     alignment and structure
>pdb|3G87|A Chain A, Crystal Structure Of Malonyl Coa-Acyl Carrier Protein Transacylase From Burkholderia Pseudomallei Using Dried Seaweed As Nucleant Or Protease Length = 394 Back     alignment and structure
>pdb|3HJV|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of An Acyl Carrier Protein S-Malonyltransferase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 Length = 312 Back     alignment and structure
>pdb|2CUY|A Chain A, Crystal Structure Of Malonyl Coa-acyl Carrier Protein Transacylase From Thermus Thermophilus Hb8 Length = 305 Back     alignment and structure
>pdb|2H1Y|A Chain A, Crystal Structure Of Malonyl-Coa:acyl Carrier Protein Transacylase (Mcat) From Helicobacter Pylori Length = 321 Back     alignment and structure
>pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 Back     alignment and structure
>pdb|2CDH|4 Chain 4, Architecture Of The Thermomyces Lanuginosus Fungal Fatty Acid Synthase At 5 Angstrom Resolution. Length = 305 Back     alignment and structure
>pdb|2CF2|B Chain B, Architecture Of Mammalian Fatty Acid Synthase Length = 304 Back     alignment and structure
>pdb|1NM2|A Chain A, "malonyl-Coa:acp Transacylase" Length = 317 Back     alignment and structure
>pdb|2QJ3|A Chain A, Mycobacterium Tuberculosis Fabd Length = 322 Back     alignment and structure
>pdb|2QC3|A Chain A, Crystal Structure Of Mcat From Mycobacterium Tuberculosis Length = 303 Back     alignment and structure
>pdb|4AMN|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 421 Back     alignment and structure
>pdb|4AMM|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 401 Back     alignment and structure
>pdb|4AMO|A Chain A, Crystal Structure Of The Acyltransferase Domain Of The Iterative Polyketide Synthase In Enediyne Biosynthesis Reveals The Molecular Basis Of Substrate Specificity Length = 421 Back     alignment and structure
>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 Back     alignment and structure
>pdb|2VKZ|G Chain G, Structure Of The Cerulenin-Inhibited Fungal Fatty Acid Synthase Type I Multienzyme Complex Length = 2051 Back     alignment and structure
>pdb|2UVA|G Chain G, Crystal Structure Of Fatty Acid Synthase From Thermomyces Lanuginosus At 3.1 Angstrom Resolution. This File Contains The Beta Subunits Of The Fatty Acid Synthase. The Entire Crystal Structure Consists Of One Heterododecameric Fatty Acid Synthase And Is Described In Remark 400 Length = 2060 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
2c2n_A339 Malonyl COA-acyl carrier protein transacylase; fat 2e-93
3ptw_A 336 Malonyl COA-acyl carrier protein transacylase; str 7e-75
3k89_A 314 Malonyl COA-ACP transacylase; bacterial blight, XO 2e-74
3qat_A 318 Malonyl COA-acyl carrier protein transacylase; sea 5e-74
3tqe_A 316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 3e-73
2qc3_A303 MCT, malonyl COA-acyl carrier protein transacylase 4e-73
1mla_A309 Malonyl-coenzyme A acyl carrier protein transacyla 5e-73
3ezo_A 318 Malonyl COA-acyl carrier protein transacylase; ssg 2e-72
3sbm_A281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 2e-72
3im9_A316 MCAT, MCT, malonyl COA-acyl carrier protein transa 1e-71
3im8_A307 Malonyl acyl carrier protein transacylase; fatty a 1e-71
3g87_A 394 Malonyl COA-acyl carrier protein transacylase; ssg 2e-70
1nm2_A 317 Malonyl COA:acyl carrier protein malonyltransfera; 6e-70
2h1y_A 321 Malonyl coenzyme A-acyl carrier protein transacyl; 7e-70
2cuy_A 305 Malonyl COA-[acyl carrier protein] transacylase; t 3e-69
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 5e-41
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 6e-39
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 7e-39
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 5e-37
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 4e-27
4amm_A 401 DYNE8; transferase; 1.40A {Micromonospora chersina 3e-26
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 1e-25
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 7e-20
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 1e-19
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Length = 339 Back     alignment and structure
 Score =  278 bits (713), Expect = 2e-93
 Identities = 80/217 (36%), Positives = 117/217 (53%), Gaps = 6/217 (2%)

Query: 56  TAVTVDDALFADYKPTNAFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEIC 115
             +  ++  F      +  LFPGQG+Q VGMG+   + P   ELY  A  +LG+DLLE+ 
Sbjct: 11  VDLGTENLYFQSMGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELS 70

Query: 116 TNGPKEKLDSTIISQPAIYVTSLAAVELLRARDGGQQIIDSVDVTCGLSLGEYTALAFAG 175
            +GP+E LD T+  QPAI+V SLAAVE L        +I++     G S+GE+ AL FAG
Sbjct: 71  LHGPQETLDRTVHCQPAIFVASLAAVEKLHHLQP--SVIENCVAAAGFSVGEFAALVFAG 128

Query: 176 AFSFEDGLKLVKLRGAAMQEAADAAKGAMVSIIGLDSDKVQQLCDAANQEVD----EDNK 231
           A  F +GL  VK+R  AMQEA++A    M+S++G    K    C  A +       E+  
Sbjct: 129 AMEFAEGLYAVKIRAEAMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPV 188

Query: 232 VQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTV 268
            +++NYL P    +SG  + +  ++  +  F  R T 
Sbjct: 189 CEVSNYLFPDCRVISGHQEALRFLQKNSSKFHFRRTR 225
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Length = 336 Back     alignment and structure
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Length = 314 Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Length = 318 Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Length = 316 Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Length = 303 Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Length = 309 Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Length = 318 Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Length = 281 Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Length = 316 Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Length = 307 Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Length = 394 Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Length = 317 Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Length = 321 Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Length = 305 Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051 Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060 Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Length = 401 Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
3tzy_A 491 Polyketide synthase PKS13; acyltransferase, long f 100.0
4amm_A 401 DYNE8; transferase; 1.40A {Micromonospora chersina 100.0
3ezo_A 318 Malonyl COA-acyl carrier protein transacylase; ssg 100.0
3ptw_A 336 Malonyl COA-acyl carrier protein transacylase; str 100.0
2h1y_A 321 Malonyl coenzyme A-acyl carrier protein transacyl; 100.0
3im8_A307 Malonyl acyl carrier protein transacylase; fatty a 100.0
3tqe_A 316 Malonyl-COA-[acyl-carrier-protein] transacylase; f 100.0
3k89_A 314 Malonyl COA-ACP transacylase; bacterial blight, XO 100.0
3qat_A 318 Malonyl COA-acyl carrier protein transacylase; sea 100.0
1mla_A309 Malonyl-coenzyme A acyl carrier protein transacyla 100.0
3im9_A 316 MCAT, MCT, malonyl COA-acyl carrier protein transa 100.0
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 100.0
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 100.0
2cuy_A 305 Malonyl COA-[acyl carrier protein] transacylase; t 100.0
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 100.0
2qc3_A303 MCT, malonyl COA-acyl carrier protein transacylase 100.0
1nm2_A 317 Malonyl COA:acyl carrier protein malonyltransfera; 100.0
3g87_A 394 Malonyl COA-acyl carrier protein transacylase; ssg 100.0
3sbm_A281 DISD protein, DSZD; transferase; HET: P6G; 1.35A { 100.0
2c2n_A339 Malonyl COA-acyl carrier protein transacylase; fat 100.0
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 100.0
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
2uv8_G2051 Fatty acid synthase subunit beta (FAS1); fatty aci 100.0
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 100.0
2uva_G2060 Fatty acid synthase beta subunits; fungal, dehydra 100.0
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 100.0
3qit_A286 CURM TE, polyketide synthase; thioesterase, alpha/ 83.45
4f0j_A315 Probable hydrolytic enzyme; alpha/beta hydrolase f 80.84
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-52  Score=398.80  Aligned_cols=259  Identities=19%  Similarity=0.251  Sum_probs=220.8

Q ss_pred             hcccCHHHHHHHHHHHHhHhhcCcc---chhh----hhhcccccCccEEEeeccccchhccc----c-----c--ccccC
Q 023172            6 SLAFSSSSLHNRYHKRTTFFNGSAA---SFNR----IGVRRSLARSGVFMSVSVGKHTAVTV----D-----D--ALFAD   67 (286)
Q Consensus         6 ~~a~s~~~l~~~~~~~~~~l~~~~~---~~~~----~~~~r~~~~~r~~~~~~~~~~~~~~~----~-----~--~~~~~   67 (286)
                      =.|+|+.+|+.+++++.+||..++.   .+.|    + .+|+|++||.++++.+.+.....+    .     .  .....
T Consensus        58 lSA~s~~aL~~~a~~l~~~L~~~~~~~~~l~dla~tl-a~R~~~~~R~~vva~~~~el~~~L~a~a~g~~~~~~~~~~~~  136 (491)
T 3tzy_A           58 VSAFLTSRKKAAAAELADWMQSPEGQASSLESIGRSL-SRRNHGRSRAVVLAHDHDEAIKGLRAVAAGKQAPNVFSVDGP  136 (491)
T ss_dssp             EEESSHHHHHHHHHHHHHHHHSHHHHTSCHHHHHHHH-HHSCCCSEEEEEEESSHHHHHHHHHHHHTTCCCTTEEEESSC
T ss_pred             EeCCCHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHH-hcccCCCceEEEEECCHHHHHHhhhhhhcCCCCCCceeccCC
Confidence            3589999999999999999986542   3555    5 489999999988887754432211    1     1  11234


Q ss_pred             CCCcEEEEecCCCCcccccchh-hhccHHHHHHHHHHHHHc----CCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHHH
Q 023172           68 YKPTNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDIL----GFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVE  142 (286)
Q Consensus        68 ~~~~~~fvF~Gqg~~~~~m~~~-~~~~p~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~~  142 (286)
                      ..++++|+|||||+||+|||++ |..+|+||+.+++|++++    ++++.+.++.++.  ..++.++||++|++|+++++
T Consensus       137 ~~~~~vfvF~GQGsQ~~gMG~~L~~~~p~fr~~~~~~~~~l~~~~~~sl~~~l~~~~~--~~~~~~~Qpalfa~q~Al~~  214 (491)
T 3tzy_A          137 VTTGPVWVLAGFGAQHRKMGKSLYLRNEVFAAWIEKVDALVQDELGYSVLELILDDAQ--DYGIETTQVTIFAIQIALGE  214 (491)
T ss_dssp             CSSCCEEEECCTTTCCTTTTHHHHHHCHHHHHHHHHHHHHHHHHHSSCHHHHHHCTTC--CCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcchhhhHHHHhhcCHHHHHHHHHHHHHhhhhhchhHHHHhcCCch--hhhhHHHHHHHHHHHHHHHH
Confidence            5678999999999999999999 789999999999999875    8999999886543  35678899999999999999


Q ss_pred             HHHHccCCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhhccCCCc----EEEEeCCCHHHHHHH
Q 023172          143 LLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAADAAKGA----MVSIIGLDSDKVQQL  218 (286)
Q Consensus       143 ~l~~~g~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~~~~~g~----mlaV~~~~~~~~~~~  218 (286)
                      +|++||     | +|++|+|||+|||+|+|++|+||++|++++++.|+++|++......|.    |..+ +.+.++++++
T Consensus       215 ll~~~G-----v-~P~av~GHS~GE~aAa~~AG~lsleda~~lv~~Rg~lm~~~~~~~~g~m~~~ma~v-~~~~~~v~~~  287 (491)
T 3tzy_A          215 LLRHHG-----A-KPAAVIGQSLGEAASAYFAGGLSLRDATRAICSRSHLMGEGEAMLFGEYIRLMALV-EYSADEIREV  287 (491)
T ss_dssp             HHHHTT-----C-CCSEEEECGGGHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEE-SCCHHHHHHH
T ss_pred             HHHHcC-----C-CcceEeecCHhHHHHHHHcCCchhhhhhhhhhhhhhhhhhccccCCCcchhhhhhc-cchHHHHHhh
Confidence            999999     8 999999999999999999999999999999999999999865444443    5555 8999999888


Q ss_pred             HHHhcccCCCCCceEEEeeeCCCCEEEEcCHHHHHHHHHHHHhcCCCceeecccCCCCCCCCCCC
Q 023172          219 CDAANQEVDEDNKVQIANYLCPGNYAVSGGVKGIEAVEAKAKSFKARMTVISSFICIPIQCHPCT  283 (286)
Q Consensus       219 l~~~~~~~~~~~~v~ia~~Nsp~~~vvsG~~~~l~~l~~~l~~~~~~~~~~l~v~~~afHsp~~~  283 (286)
                      +..       ..+|+|||+|||+++||||+.++|+++.+.|++.|+ ++++|+|+ +|||||+|.
T Consensus       288 ~~~-------~~~v~iA~~NsP~~~ViSG~~~ai~~~~~~l~~~g~-~~~~L~V~-~AfHS~~m~  343 (491)
T 3tzy_A          288 FSD-------FPDLEVCVYAAPTQTVIGGPPEQVDAILARAEAEGK-FARKFATK-GASHTSQMD  343 (491)
T ss_dssp             GGG-------CTTCEEEEEEETTEEEEEECHHHHHHHHHHHHHHTC-CEEEESCS-SCTTSGGGG
T ss_pred             hcc-------cccceeeeecCCCcEEeCCcHHHHHHHHHHHHhcCc-eEEecccc-cCCcchhhh
Confidence            764       457999999999999999999999999999999998 89999999 999999765
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Back     alignment and structure
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Back     alignment and structure
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Back     alignment and structure
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Back     alignment and structure
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Back     alignment and structure
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Back     alignment and structure
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Back     alignment and structure
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Back     alignment and structure
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Back     alignment and structure
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Back     alignment and structure
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Back     alignment and structure
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Back     alignment and structure
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Back     alignment and structure
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 286
d1nm2a1253 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of m 3e-26
d1mlaa1235 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m 4e-25
d1mlaa270 d.58.23.1 (A:128-197) Probable ACP-binding domain 6e-11
d1nm2a262 d.58.23.1 (A:134-195) Probable ACP-binding domain 8e-08
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 253 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Streptomyces coelicolor A3(2) [TaxId: 100226]

 Score =  101 bits (252), Expect = 3e-26
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 73  AFLFPGQGAQAVGMGKEAQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPA 132
             + PGQGAQ  G   +  ++P AA+     +D +G DL    T    +++  T ++QP 
Sbjct: 4   VLVAPGQGAQTPGFLTDWLALPGAADRVAAWSDAIGLDLAHFGTKADADEIRDTSVAQPL 63

Query: 133 IYVTSLAAVELLRARDGGQQIIDSV---DVTCGLSLGEYTALAFAGAFSFED 181
           +    + +   L  +                 G S+GE TA  FAG      
Sbjct: 64  LVAAGILSAAALGTQTSVADATGPGFTPGAVAGHSVGEITAAVFAGVLDDTA 115
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]} Length = 70 Back     information, alignment and structure
>d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} Length = 62 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
d1mlaa1235 Catalytic domain of malonyl-CoA ACP transacylase F 99.97
d1nm2a1253 Catalytic domain of malonyl-CoA ACP transacylase F 99.94
d1mlaa270 Probable ACP-binding domain of malonyl-CoA ACP tra 99.56
d1nm2a262 Probable ACP-binding domain of malonyl-CoA ACP tra 99.31
d1ehya_293 Bacterial epoxide hydrolase {Agrobacterium radioba 82.53
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.3e-31  Score=230.23  Aligned_cols=121  Identities=41%  Similarity=0.681  Sum_probs=113.8

Q ss_pred             cEEEEecCCCCcccccchh-hhccHHHHHHHHHHHHHcCCChHHHhhCCCCCCCCCcccHhHHHHHHHHHHHHHHHHc-c
Q 023172           71 TNAFLFPGQGAQAVGMGKE-AQSVPAAAELYKKANDILGFDLLEICTNGPKEKLDSTIISQPAIYVTSLAAVELLRAR-D  148 (286)
Q Consensus        71 ~~~fvF~Gqg~~~~~m~~~-~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~a~~~al~~~l~~~-g  148 (286)
                      +++|+|||||+||+|||++ |.++|.||+.+++|++++|+++.+.+...+...+.++.+.||++|++|++++++|+++ |
T Consensus         1 q~AfvFpGQGsQ~~gMg~~L~~~~p~~r~~~~~~~~~l~~~l~~~~~~~~~~~~~~t~~~qpai~~~~~al~~~l~~~~g   80 (235)
T d1mlaa1           1 QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGG   80 (235)
T ss_dssp             CEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHHTSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEeCChhhhHHHHHHHHHHCCHHHHHHHHHHHHHhCCCHHHHHhcCcccccccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            5799999999999999999 7899999999999999999999998877666678889999999999999999999987 7


Q ss_pred             CCCCccCCccEEEeccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhh
Q 023172          149 GGQQIIDSVDVTCGLSLGEYTALAFAGAFSFEDGLKLVKLRGAAMQEAA  197 (286)
Q Consensus       149 ~~~~~i~~p~~v~GhS~GE~aAa~~aG~ls~~dal~l~~~R~~l~~~~~  197 (286)
                           + +|++++|||+|||+|++++|+|+++|+++++..|+++|+...
T Consensus        81 -----~-~p~~v~GhSlGE~aAl~~aG~ls~e~~~~lv~~Rg~~m~~~~  123 (235)
T d1mlaa1          81 -----K-APAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAV  123 (235)
T ss_dssp             -----C-CCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHS
T ss_pred             -----C-CceeeeeccchHHHHHHHcCCcccccHHHHHHHHHHHHHHcC
Confidence                 7 899999999999999999999999999999999999999874
>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nm2a2 d.58.23.1 (A:134-195) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Streptomyces coelicolor A3(2) [TaxId: 100226]} Back     information, alignment and structure
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Back     information, alignment and structure