Citrus Sinensis ID: 023175

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
Protein Sequence
MALRTCQNFASPFVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAALAGLIFAQTVKTYYFVEGL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHcccEEcccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccHHHHHHHHHHHHHccHHHHHHHEEEcccccHHHHHHHccccccHHHccccEEcccccHHHHHHHHHHcccHHHcccccccccccEEccccHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHccccccccHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHcHHHHHHccEcccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccHHHHHHHHHHHHHccccHccEEEEEcccHHHHHHHHHHHHHccHccHcEEEEccccHHHHHHHHccHHHcHHHcccccccccccccccccEEEEHHccc
Coil and Loop (DISEMBL)
malrtcqnfaspfvssikltkkpirnfkapvkncqsdphesRKLVLQVKERLEKdynslpvgkngrddEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGkayvhdfldineRPVLIVVASkhlpavhdpvedEKLCVFFIEKAlsklppgkeqilgiidlrgfgtenadLKFLTFLFDVFYyyhpkrlgevlfveapfvfkpfwqlTKPLLKSyaslkpsgrnislkQRCQTTLESRLLVKSLHSCLAALAGLIFAQTVKTYYFVEGL
Flexible Loop (DISEMBL)
malrtcqnfaspfvssikltkkpirnfkapvkncqsdphesrKLVLQVKERLekdynslpvgkngrddeDMILWFLKDRKFSIEESLAKLTKaikwrqefrvselnedsvRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKalsklppgkeqILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYAslkpsgrnislKQRCQTTLESRLLVKSLHSCLAALAGLIFAQTVKTYYFVEGL
Low Complexity Region (SEG)
MALRTCQNFASPFVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAALAGLIFAQTVKTYYFVEGL
Disordered region (IsUnstruct)
************FV**I***************************************************EDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAALAGLIFAQTVKTYYFV***
Disordered Region (DISOPRED)
**********************************************QVKERLEK**NSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAALAGLIFAQTVKTYYFVEGL
Disordered Region (DISEMBL)
MALRTCQNFASPFVSSIKLTKKPIRNFKAPV**********RKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAALAGLIFAQTVKTYYFVEGL
Disordered Region (DISPRO)
**************************************HESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAALAGLIFAQTVKTYYFVEGL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALRTCQNFASPFVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAALAGLIFAQTVKTYYFVEGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	286	2.2.26 [Sep-21-2011]
Q10138	444	CRAL-TRIO domain-containi	yes	no	0.573	0.369	0.295	7e-13
Q9CWP6	518	Motile sperm domain-conta	yes	no	0.702	0.388	0.260	2e-12
Q8NHP6	518	Motile sperm domain-conta	yes	no	0.702	0.388	0.260	7e-12
Q06705	408	Phosphatidylinositol tran	yes	no	0.541	0.379	0.304	2e-11
Q55CU8	364	Random slug protein 5 OS=	no	no	0.531	0.417	0.289	1e-10
Q757H2	436	Phosphatidylinositol tran	yes	no	0.583	0.383	0.261	2e-09
Q10137	286	Sec14 cytosolic factor OS	no	no	0.562	0.562	0.278	4e-08
Q9UUC2	355	CRAL-TRIO domain-containi	no	no	0.559	0.450	0.292	7e-08
Q9HDZ5	388	CRAL-TRIO domain-containi	no	no	0.569	0.420	0.237	3e-07
P24859	301	SEC14 cytosolic factor OS	no	no	0.587	0.558	0.278	8e-07

>sp|Q10138|YAS2_SCHPO CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1

 Score = 74.7 bits (182), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 12/176 (6%)

Query: 64  NGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWR-QEFRVSEL---------NEDSVRGI 113
           N  D + ++L FL+ RK+++E +L    K + WR +E  V E+         ++D VR +
Sbjct: 119 NCDDPDGLLLRFLRARKWNVEAALEMFMKTVHWRSREMNVGEIVCNADHLDKDDDFVRQL 178

Query: 114 AESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQIL 173
              GK ++    D + RPV  + A  H      P   E+L V+ +E A   L P  E   
Sbjct: 179 -RIGKCFIFG-EDKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETAT 236

Query: 174 GIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
            + D+  F   N D   L F+   F  ++P+ LGE +  +AP++F+  W + K  L
Sbjct: 237 VVFDMTDFSMSNMDYGPLKFMIKCFEAHYPECLGECIVHKAPWLFQGVWSIIKSWL 292

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2 PE=1 SV=2

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 29/230 (12%)

Query: 1   MALRTCQNFASPFVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLP 60
           MA    QN A       KL  +  R F+A     +S+ ++SR +     ERL++D N + 
Sbjct: 1   MAENNAQNKA-------KLISETRRRFEAEYVTEKSEKYDSRDV-----ERLQQDDNWV- 47

Query: 61  VGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSV-RGIAESGKA 119
                   E  + W    R   ++E+L  L ++ +WR+EF V++L+E S+ R + E G  
Sbjct: 48  --------ESYLYW----RHNVVDETLKMLDESFQWRKEFSVNDLSESSIPRWLLELGGI 95

Query: 120 YVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLR 179
           Y+H + D     +  +    H+      ++ +KL  F++E+  +K   GK  I  + D+ 
Sbjct: 96  YLHGY-DKEGNKLFWIRVKYHIKDQKTIMDKKKLIAFWLER-YAKRENGK-PITVMFDMS 152

Query: 180 GFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
             G  + D+ F+ F+ + F  Y+PK L +++  + P++    +++ K  L
Sbjct: 153 ETGLNSIDMDFVRFIINCFKVYYPKYLSKIVIFDMPWIMNAAFKIVKSWL 202

Mus musculus (taxid: 10090)

>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2 PE=1 SV=1

 Score = 71.2 bits (173), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 29/230 (12%)

Query: 1   MALRTCQNFASPFVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLP 60
           MA    QN A       KL  +  R F+A     +SD +++R +     ERL++D N + 
Sbjct: 1   MAENHAQNKA-------KLISETRRRFEAEYVTDKSDKYDARDV-----ERLQQDDNWV- 47

Query: 61  VGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSV-RGIAESGKA 119
                   E  + W    R   ++E+L  L ++ +WR+E  V++LNE S+ R + E G  
Sbjct: 48  --------ESYLSW----RHNIVDETLKMLDESFQWRKEISVNDLNESSIPRWLLEIGVI 95

Query: 120 YVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLR 179
           Y+H + D     +  +    H+      ++ +KL  F++E+  +K   GK  +  + DL 
Sbjct: 96  YLHGY-DKEGNKLFWIRVKYHVKDQKTILDKKKLIAFWLER-YAKRENGK-PVTVMFDLS 152

Query: 180 GFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
             G  + D+ F+ F+ + F  Y+PK L +++  + P++    +++ K  L
Sbjct: 153 ETGINSIDMDFVRFIINCFKVYYPKYLSKIVIFDMPWLMNAAFKIVKTWL 202

Homo sapiens (taxid: 9606)

>sp|Q06705|CSR1_YEAST Phosphatidylinositol transfer protein CSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSR1 PE=1 SV=1

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 16/171 (9%)

Query: 72  ILWFLKDRKFSIEESLAKLTKAIKWRQ----------EFRVSELNEDSVRGIAESGKAYV 121
           IL F++ RK++ ++++A L   + WR+          E  V E NE  V    E  KA +
Sbjct: 112 ILKFIRARKWNADKTIAMLGHDLYWRKDTINKIINGGERAVYENNETGVIKNLELQKATI 171

Query: 122 HDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKA---LSKLPPGKEQILGIIDL 178
             + D + RPV++V    H  +     E EK  +  IE++     +  P    IL   DL
Sbjct: 172 QGY-DNDMRPVILVRPRLHHSSDQTEQELEKFSLLVIEQSKLFFKENYPASTTIL--FDL 228

Query: 179 RGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
            GF   N D   + FL   F  ++P+ LG +L  +AP++F P W + K  L
Sbjct: 229 NGFSMSNMDYAPVKFLITCFEAHYPESLGHLLIHKAPWIFNPIWNIIKNWL 279

Non-classical phosphatidylinositol (PtdIns) transfer protein (PITP), which exhibits PtdIns-binding/transfer activity in the absence of detectable PtdCho-binding/transfer activity. Activates SPO14/PLD1 (phospholipase D1) by stimulating phosphoinositide synthesis via the STT4 PtdIns 4-kinase. Modulates ArfGAP function through effects on SPO14 activity. Inhibits phosphatidylcholine degradation by PLB1 (phospholipase B1). May also regulate post-Golgi membrane-trafficking events and have a role resistance to oxidative stress.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q55CU8|RSC5_DICDI Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 14/166 (8%)

Query: 73  LWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELN-EDSVRGIAESGKAYVHDFLDINERP 131
           L +L+ R + + +S   L   ++WR++FR  ++     +R I  +G  YV+   D   RP
Sbjct: 77  LRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVYVNK-RDKKGRP 135

Query: 132 VLIVVA-SKHLPAVHDPVEDEKLCVFFIEKALSKL--PPGKEQILGIIDLRGFGTENADL 188
           ++  V  +  L  V   ++ + L V+++E+  S++  P G EQ   I+D + FG+ N D+
Sbjct: 136 IIFAVPRNDTLKNVPSELKFKNL-VYWLEQGFSRMDEPKGIEQFCFIVDYKDFGSGNMDM 194

Query: 189 KF----LTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLK 230
           K     + FL D    + P+R+G+ LF++ P +F   W++  P L 
Sbjct: 195 KTNLEAMHFLLD----HCPERMGQSLFLDPPALFWFAWKIISPFLN 236

Dictyostelium discoideum (taxid: 44689)

>sp|Q757H2|CSR1_ASHGO Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 69  EDMILWFLKDRKFSIEESLAKLTKAIKWR-QEFRVSELNEDSVRGIA-----------ES 116
           ++++L F++ RK+ I +++  +  +++WR  E +  ++     RG             E 
Sbjct: 138 DNLLLRFVRARKWDINKAMIMMAHSLRWRLNEGKPEDIVFGGERGAQKADKKGIVKQLEL 197

Query: 117 GKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGII 176
           GKA V  F D N  P++ V    H  A     E  +  +  IE+A   L    +    + 
Sbjct: 198 GKATVRGF-DKNGCPIVYVRPRLHHAADQTEAETSEYSLLIIEQARLFLKEPCDTATILF 256

Query: 177 DLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASLK 236
           DL GF   N D   + FL   F  ++P+ LG++   +AP++F P W + K  L    + K
Sbjct: 257 DLSGFSMANMDYAPVKFLITCFEAHYPECLGKLFIHKAPWIFPPIWNIIKNWLDPVVAAK 316

Non-classical phosphatidylinositol (PtdIns) transfer protein (PITP), which exhibits PtdIns-binding/transfer activity in the absence of detectable PtdCho-binding/transfer activity. May also regulate post-Golgi membrane-trafficking events and have a role resistance to oxidative stress.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|Q10137|SEC14_SCHPO Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=4 SV=1

 Score = 59.3 bits (142), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 33/194 (17%)

Query: 61  VGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAY 120
           +G   R D+  +L FL+ RKF++++SL    K  KWR+EF V +L ++      E+   Y
Sbjct: 42  LGYTERLDDATLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVDDLIKNFHYDEKEAVSKY 101

Query: 121 VHDFL---DINERPVLI----VVASKHLPAVHDPVEDEKLCVFFIEK-ALSKLPPGKEQI 172
              F    DI+ RPV +     +  K L  +  P    +  V+  E  AL + P    + 
Sbjct: 102 YPQFYHKTDIDGRPVYVEQLGNIDLKKLYQITTPERMMQNLVYEYEMLALKRFPACSRKA 161

Query: 173 LG-------IIDLRGFGTENADLKFLTFLFDVFYY----------YHPKRLGEVLFVEAP 215
            G       I+DL+G G        +T +  V+ Y          Y+P+R+G+   + AP
Sbjct: 162 GGLIETSCTIMDLKGVG--------ITSIHSVYSYIRQASSISQDYYPERMGKFYVINAP 213

Query: 216 FVFKPFWQLTKPLL 229
           + F   + L K  L
Sbjct: 214 WGFSSAFNLIKGFL 227

Has a direct role in controlling cell septation and in forespore membrane formation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9UUC2|YGR1_SCHPO CRAL-TRIO domain-containing protein C365.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC365.01 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 18/178 (10%)

Query: 67  DDEDM-ILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFL 125
           DD D+ +L FLK RKF + +S   L  AI WRQ+   + L    VRG     + +V   +
Sbjct: 49  DDFDLTLLRFLKARKFVVTDSSDMLANAIVWRQQ---ANLRSIMVRGENGLNQNFVKASM 105

Query: 126 ------DINERPVLIVVASKHLPA--VHDPVEDEKLCVFFIEKA---LSKLPPGKEQILG 174
                 D   R ++ +     +P     D  E + L ++ +E A   L       + +LG
Sbjct: 106 YFIWGQDKKGRAIVFLNLHNFIPPKNTKDMEELKALILYAMENARLFLDSEQNAAKGVLG 165

Query: 175 IIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPF---VFKPFWQLTKPLL 229
           ++DL  F  +N DL F     + F  Y+P+ LG+ L V + F   +F+  W + K  L
Sbjct: 166 LVDLTYFSRKNIDLDFARVFAETFQNYYPEILGQALIVGSGFRMALFEGVWSIGKYFL 223

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9HDZ5|YKP9_SCHPO CRAL-TRIO domain-containing protein C589.09, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC589.09 PE=4 SV=1

 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 22/185 (11%)

Query: 67  DDEDMIL-WFLKDRKFSIEESLAKLTKAIKWR-----------QEFRVSELNEDSVRGIA 114
           D  D IL  FL        E+  KL   ++WR            E    E N+D      
Sbjct: 77  DSPDAILVRFLASCNNDSHEASQKLINTLQWRVDTGVERIVERGELYAKETNDDQFLEQL 136

Query: 115 ESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGK----- 169
            +GK  +    D+++RP+  +    H P+        ++ V+ +E     L P K     
Sbjct: 137 RTGKVTMLG-RDLSDRPICYIQVHLHQPSKLTQNSLREMTVWVMETMRLFLRPQKTLKDS 195

Query: 170 ----EQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLT 225
               + +  + DL  F   N D  F+ +L     YY+P+ LG  +  ++P++F+  W + 
Sbjct: 196 MDSPQNVNVLFDLSNFSLHNMDYSFVKYLASCLEYYYPQSLGVCILHKSPWIFRSVWNII 255

Query: 226 KPLLK 230
           K  +K
Sbjct: 256 KGWIK 260

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P24859|SEC14_KLULA SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2

 Score = 54.7 bits (130), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 19/187 (10%)

Query: 61  VGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNED----SVRGIAES 116
           +G   R D+  +L FL+ RKF +E S        KWR+EF V  + ED        +A+ 
Sbjct: 45  LGYKERLDDSTLLRFLRARKFDLEASKIMYENCEKWRKEFGVDTIFEDFHYEEKPLVAKY 104

Query: 117 GKAYVHDFLDINERPVLI-VVASKHLPAVHDPVEDEKL---CVFFIEKALSKLPPGKEQI 172
              Y H   D + RPV I  + S +L  ++     E++    V+  E  +    P   + 
Sbjct: 105 YPQYYHK-TDNDGRPVYIEELGSVNLTQMYKITTQERMLKNLVWEYEAFVRYRLPACSRK 163

Query: 173 LG--------IIDLRGFGTENAD--LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFW 222
            G        I+DL+G    +A   L ++    ++   Y+P+R+G+   + APF F   +
Sbjct: 164 AGYLVETSCTILDLKGISISSAAQVLSYVREASNIGQNYYPERMGKFYLINAPFGFSTAF 223

Query: 223 QLTKPLL 229
           +L KP L
Sbjct: 224 RLFKPFL 230

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
255540591	260	transporter, putative [Ricinus communis]	0.821	0.903	0.702	1e-97
224135861	264	predicted protein [Populus trichocarpa]	0.821	0.890	0.716	1e-96
359491329	260	PREDICTED: SEC14 cytosolic factor-like [	0.821	0.903	0.727	1e-95
449441005	261	PREDICTED: motile sperm domain-containin	0.814	0.892	0.693	3e-94
356513611	260	PREDICTED: sec14 cytosolic factor-like [	0.765	0.842	0.692	1e-85
297797291	263	transporter [Arabidopsis lyrata subsp. l	0.779	0.847	0.663	1e-84
79546079	263	Sec14p-like phosphatidylinositol transfe	0.779	0.847	0.659	3e-84
356562712	262	PREDICTED: CRAL-TRIO domain-containing p	0.734	0.801	0.710	8e-84
357143311	256	PREDICTED: motile sperm domain-containin	0.790	0.882	0.631	2e-80
115445815	261	Os02g0321500 [Oryza sativa Japonica Grou	0.674	0.739	0.715	2e-78

>gi|255540591|ref|XP_002511360.1| transporter, putative [Ricinus communis] gi|223550475|gb|EEF51962.1| transporter, putative [Ricinus communis]

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 165/235 (70%), Positives = 203/235 (86%)

Query: 1   MALRTCQNFASPFVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLP 60
           MA R+  +   P ++   LTK P RN K  ++NC  DP  SRKLVL+VK++LEK+++SLP
Sbjct: 1   MAFRSSHSLGRPLIAPTNLTKTPSRNCKFSIQNCSLDPSHSRKLVLEVKDKLEKEHHSLP 60

Query: 61  VGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAY 120
           VG+NGRDDEDMILWFLKDRKFS+EE++AKLTKAIKWRQEF+VSEL E+ V+ +A++GK+Y
Sbjct: 61  VGQNGRDDEDMILWFLKDRKFSVEEAVAKLTKAIKWRQEFKVSELTEELVKSVADTGKSY 120

Query: 121 VHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRG 180
           VH FLD++ RPVL+VVASKH P VHDPVEDE+LCVF +EKAL+KLP G+ +ILG+ DLRG
Sbjct: 121 VHGFLDVHGRPVLVVVASKHFPDVHDPVEDERLCVFLVEKALAKLPAGQTKILGVFDLRG 180

Query: 181 FGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASL 235
           F TEN+DLKFLTF+FDVFYYY+PKRLGEVLFV+APF+FKP WQLTKPLLKSYAS+
Sbjct: 181 FKTENSDLKFLTFVFDVFYYYYPKRLGEVLFVDAPFIFKPIWQLTKPLLKSYASM 235

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135861|ref|XP_002322179.1| predicted protein [Populus trichocarpa] gi|222869175|gb|EEF06306.1| predicted protein [Populus trichocarpa]

 Score =  358 bits (920), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 169/236 (71%), Positives = 203/236 (86%), Gaps = 1/236 (0%)

Query: 1   MALRTCQNFASPFVSSIKLTKKPIRNFKAPVKNCQSDPHESRK-LVLQVKERLEKDYNSL 59
           MA+RTC N   P ++ + LTK P RN K  V++C    ++S K L+++VKE+L +DY+SL
Sbjct: 1   MAIRTCLNLGRPQIAPVTLTKSPSRNCKFSVQSCSLSSNQSHKQLIVEVKEKLGRDYHSL 60

Query: 60  PVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKA 119
           PVGKNGRDDE+MILWFLKDRKFS++E+++KLTKAIKWR+EF+VSEL+E+SV+ IA++GKA
Sbjct: 61  PVGKNGRDDEEMILWFLKDRKFSVDEAVSKLTKAIKWREEFKVSELSEESVKSIADTGKA 120

Query: 120 YVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLR 179
           YVHD LD+  +PVLIVVASKHLPAVHDPVEDEKLCVF IEKAL KL  GKEQILGIIDLR
Sbjct: 121 YVHDSLDVYGKPVLIVVASKHLPAVHDPVEDEKLCVFLIEKALRKLAAGKEQILGIIDLR 180

Query: 180 GFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASL 235
           GF T NADLKFLTFLFDV YYY+PKRLG+VLFVEAPF+FKP WQ+ KPLL+SY SL
Sbjct: 181 GFSTRNADLKFLTFLFDVIYYYYPKRLGQVLFVEAPFIFKPIWQVAKPLLRSYTSL 236

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491329|ref|XP_003634267.1| PREDICTED: SEC14 cytosolic factor-like [Vitis vinifera] gi|297733742|emb|CBI14989.3| unnamed protein product [Vitis vinifera]

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 171/235 (72%), Positives = 199/235 (84%)

Query: 1   MALRTCQNFASPFVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLP 60
           MA+R         +   +   K +   K  ++N  S+   SRKLV++VKE+LEKD +SLP
Sbjct: 1   MAMRLSHPLRPSSLPKFQFRPKSLSTCKFSIQNRISNSDNSRKLVMEVKEKLEKDQHSLP 60

Query: 61  VGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAY 120
           VG+NGRDDEDMILWFLKDRKFS+E+++AKLTKAIKWRQEF VSEL+E+SVR +AE+GKAY
Sbjct: 61  VGRNGRDDEDMILWFLKDRKFSVEDAVAKLTKAIKWRQEFGVSELHEESVRIVAETGKAY 120

Query: 121 VHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRG 180
           VHDFLD+N+RPVLIVVASKH PA+ DP+EDEKLCVF IEK LSKLP GKEQILGIIDLRG
Sbjct: 121 VHDFLDVNDRPVLIVVASKHFPAMQDPIEDEKLCVFLIEKVLSKLPAGKEQILGIIDLRG 180

Query: 181 FGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASL 235
           FGTENADLKFLTFLFDVFYYY+P+R+G+VLFVEAPFVFKP WQL KPLLKSYASL
Sbjct: 181 FGTENADLKFLTFLFDVFYYYYPRRVGQVLFVEAPFVFKPIWQLVKPLLKSYASL 235

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441005|ref|XP_004138274.1| PREDICTED: motile sperm domain-containing protein 2-like [Cucumis sativus] gi|449477662|ref|XP_004155085.1| PREDICTED: motile sperm domain-containing protein 2-like [Cucumis sativus]

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 165/238 (69%), Positives = 205/238 (86%), Gaps = 5/238 (2%)

Query: 1   MALRTCQNFASPFVSS---IKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYN 57
           MA+R       P + +   I +     R F   V+NC SD  +SRKLVL+VKE+LE++Y+
Sbjct: 1   MAVRLSLTLRHPLLPTSYPIPVRATQFRRFA--VQNCVSDSDDSRKLVLEVKEKLEREYS 58

Query: 58  SLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESG 117
           SLP+G+NGRDDE+MILWFLKDRKFS+E+++AKLT+AI WR+EF V EL+ED V+ +AE+G
Sbjct: 59  SLPLGRNGRDDEEMILWFLKDRKFSVEDTVAKLTRAINWRREFGVDELSEDKVKEMAETG 118

Query: 118 KAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIID 177
           KA++HDFLD+N+RPVL+VVASKHLPA+HDPVEDEKLCVF++EKALSKLPPGKE+ILGI+D
Sbjct: 119 KAFIHDFLDVNDRPVLLVVASKHLPAIHDPVEDEKLCVFYVEKALSKLPPGKEEILGIVD 178

Query: 178 LRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASL 235
           LRGF TENADL+FLTFLFDVFY+Y+PKRLG+VLFVEAP VF+P WQLTKPLLKSY+SL
Sbjct: 179 LRGFRTENADLRFLTFLFDVFYFYYPKRLGQVLFVEAPSVFRPLWQLTKPLLKSYSSL 236

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513611|ref|XP_003525505.1| PREDICTED: sec14 cytosolic factor-like [Glycine max]

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/221 (69%), Positives = 184/221 (83%), Gaps = 2/221 (0%)

Query: 17  IKLTKKPIR-NFKAPVKNCQSDPH-ESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILW 74
           + L+  P+R NF     N  S P  +SRKLVL VKE+LEK+++SLPVG+NGRDDEDMILW
Sbjct: 15  LPLSNLPVRTNFAVRCSNVHSQPQLDSRKLVLAVKEKLEKEHHSLPVGRNGRDDEDMILW 74

Query: 75  FLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLI 134
           FLKDRKFS+++++ KLTKAIKWRQ+F VS+L E+ V+   ++GK YVHDFLDIN +PVL+
Sbjct: 75  FLKDRKFSVDDAIYKLTKAIKWRQDFEVSKLTEEVVKDALQTGKGYVHDFLDINGQPVLV 134

Query: 135 VVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFL 194
           VV SKH+P   DP +DE+LCVF IEKALSK P GKEQIL I+DLRGF TENADLKFLTFL
Sbjct: 135 VVGSKHIPQALDPADDERLCVFLIEKALSKFPTGKEQILTIVDLRGFSTENADLKFLTFL 194

Query: 195 FDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASL 235
           FD+FYYY+PKRL +VLFV+APFVFKP WQL KP+LKSYASL
Sbjct: 195 FDIFYYYYPKRLAQVLFVDAPFVFKPIWQLVKPMLKSYASL 235

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797291|ref|XP_002866530.1| transporter [Arabidopsis lyrata subsp. lyrata] gi|297312365|gb|EFH42789.1| transporter [Arabidopsis lyrata subsp. lyrata]

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 148/223 (66%), Positives = 182/223 (81%)

Query: 13  FVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMI 72
           F SS  L     RN +  V++C S+ H + KLVL+VKERL KD  SLPVGK GRDDEDMI
Sbjct: 16  FKSSKNLKINRSRNCRFSVRSCVSESHHAHKLVLEVKERLAKDCTSLPVGKYGRDDEDMI 75

Query: 73  LWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPV 132
           LWFLKDR+FS++E++ KLTKAIKWR EF+V EL+EDS++   ++GKA+VH FLD+  RPV
Sbjct: 76  LWFLKDRRFSVDEAIGKLTKAIKWRHEFKVDELSEDSIKAATDTGKAFVHGFLDVKGRPV 135

Query: 133 LIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLT 192
           +IV  +KH+P + DP+EDEKLCVF +EKALSKLP G+ +ILGI DLRGFG++NADLKFLT
Sbjct: 136 VIVAPAKHIPGLLDPIEDEKLCVFLLEKALSKLPAGQHKILGIFDLRGFGSQNADLKFLT 195

Query: 193 FLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASL 235
           FLFDVFYYY+P RL EVLFV+APF+F+P WQ TKPL+K YASL
Sbjct: 196 FLFDVFYYYYPSRLDEVLFVDAPFIFQPIWQFTKPLVKQYASL 238

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79546079|ref|NP_201111.2| Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana] gi|332010310|gb|AED97693.1| Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 147/223 (65%), Positives = 181/223 (81%)

Query: 13  FVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMI 72
           F SS  L     RN +  V++C S+   + KLVL+VKERL KD  SLP+GK GRDDEDMI
Sbjct: 16  FKSSKNLNINRSRNCRFSVRSCVSESQHAHKLVLEVKERLAKDCTSLPLGKYGRDDEDMI 75

Query: 73  LWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPV 132
           LWFLKDR+FS++E++ KLTKAIKWR EF+V EL+EDS++   ++GKAYVH FLD+  RPV
Sbjct: 76  LWFLKDRRFSVDEAIGKLTKAIKWRHEFKVDELSEDSIKAATDTGKAYVHGFLDVKGRPV 135

Query: 133 LIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLT 192
           +IV  +KH+P + DP+EDEKLCVF +EKALSKLP G+ +ILGI DLRGFG++NADLKFLT
Sbjct: 136 VIVAPAKHIPGLLDPIEDEKLCVFLLEKALSKLPAGQHKILGIFDLRGFGSQNADLKFLT 195

Query: 193 FLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASL 235
           FLFDVFYYY+P RL EVLFV+APF+F+P WQ TKPL+K YASL
Sbjct: 196 FLFDVFYYYYPSRLDEVLFVDAPFIFQPIWQFTKPLVKQYASL 238

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562712|ref|XP_003549613.1| PREDICTED: CRAL-TRIO domain-containing protein C3H8.02-like [Glycine max]

 Score =  316 bits (809), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 150/211 (71%), Positives = 177/211 (83%), Gaps = 1/211 (0%)

Query: 26  NFKAPVKNCQSDPH-ESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIE 84
           NF     N  S    +SRKLVL VKE+LEK++++LPVG+NGRDDEDMILWFLKDRKFSI+
Sbjct: 27  NFAVRCANVHSQTQLDSRKLVLAVKEKLEKEHHNLPVGRNGRDDEDMILWFLKDRKFSID 86

Query: 85  ESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAV 144
           +++ KLTKAIKWR++F VS+L E+ V+   ++GK YVHD LDIN RPV++VV SKH+P  
Sbjct: 87  DAIYKLTKAIKWRRDFEVSKLTEEVVKDALQTGKGYVHDLLDINGRPVVVVVGSKHIPQA 146

Query: 145 HDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPK 204
            DP +DE+LCVF IEKALSKLP GKEQIL I+DLRGF TENADLKFLTFLFDVFYYY+PK
Sbjct: 147 LDPADDERLCVFLIEKALSKLPTGKEQILTIVDLRGFSTENADLKFLTFLFDVFYYYYPK 206

Query: 205 RLGEVLFVEAPFVFKPFWQLTKPLLKSYASL 235
           RL +VLFV+APFVFKP WQL KPLLKSYASL
Sbjct: 207 RLAQVLFVDAPFVFKPIWQLVKPLLKSYASL 237

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357143311|ref|XP_003572877.1| PREDICTED: motile sperm domain-containing protein 2-like [Brachypodium distachyon]

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 144/228 (63%), Positives = 183/228 (80%), Gaps = 2/228 (0%)

Query: 10  ASPFVSSIKLTKKPIRNFKAPVKNCQSDP--HESRKLVLQVKERLEKDYNSLPVGKNGRD 67
           A  F S ++    P    +  V+ C + P    + KLV +VKERLEK++  LP G++GRD
Sbjct: 4   ACSFRSIVRAPPLPRCPSRRAVRCCSATPGAASTSKLVFEVKERLEKEHPGLPTGRSGRD 63

Query: 68  DEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDI 127
           D++MILWFLKDRKF+I+E+++KLTKAIKWRQ+FR+SEL+E+SV+G+ ++GKAYVHD  DI
Sbjct: 64  DDEMILWFLKDRKFNIDEAISKLTKAIKWRQDFRISELSEESVKGLYQTGKAYVHDSFDI 123

Query: 128 NERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENAD 187
            +RPVL+VVA+KH P+ HDPVE+EKLC F +EKAL++LP GKE ILGI DLRGF  EN D
Sbjct: 124 YDRPVLVVVAAKHFPSKHDPVENEKLCAFLVEKALNRLPAGKENILGIFDLRGFRVENGD 183

Query: 188 LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASL 235
           L+FL FL DVFYYY+PKRLG+VLFV+APFVF+P WQL KPLLK YASL
Sbjct: 184 LQFLKFLIDVFYYYYPKRLGQVLFVDAPFVFQPMWQLVKPLLKQYASL 231

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115445815|ref|NP_001046687.1| Os02g0321500 [Oryza sativa Japonica Group] gi|50252681|dbj|BAD28849.1| SEC14 cytosolic factor-like [Oryza sativa Japonica Group] gi|113536218|dbj|BAF08601.1| Os02g0321500 [Oryza sativa Japonica Group] gi|215693913|dbj|BAG89112.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  298 bits (763), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 138/193 (71%), Positives = 167/193 (86%)

Query: 43  KLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRV 102
           KLVL+VKERLE+++  LP G+NGRDDE+MILWFLKDRK S++E+++KLTKAIKWRQ+F+V
Sbjct: 44  KLVLEVKERLEREHPGLPTGRNGRDDEEMILWFLKDRKLSVDETVSKLTKAIKWRQDFQV 103

Query: 103 SELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKAL 162
           SEL+E+SV+G+ ++GKAYVHD  DI  RPVL+VVASKH P+  DPVE+EKLC F +EKAL
Sbjct: 104 SELSEESVKGLYQTGKAYVHDSFDIYGRPVLVVVASKHFPSKQDPVENEKLCAFLVEKAL 163

Query: 163 SKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFW 222
           S+LP G E ILGI DLRGF  EN DL+FL FL DVFYYY+PKRLG+VLFV+APFVF+P W
Sbjct: 164 SRLPLGTENILGIFDLRGFQVENGDLQFLKFLIDVFYYYYPKRLGQVLFVDAPFVFQPMW 223

Query: 223 QLTKPLLKSYASL 235
           QL KPLLK YASL
Sbjct: 224 QLVKPLLKQYASL 236

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
TAIR|locus:2161942	263	AT5G63060 "AT5G63060" [Arabido	0.779	0.847	0.659	9.4e-82
TAIR|locus:2138606	301	AT4G08690 "AT4G08690" [Arabido	0.688	0.654	0.282	5.7e-20
DICTYBASE|DDB_G0275959	247	DDB_G0275959 "cellular retinal	0.692	0.801	0.302	1.2e-19
ZFIN|ZDB-GENE-041114-1	526	mospd2 "motile sperm domain co	0.625	0.340	0.270	1.8e-16
TAIR|locus:2198135	255	AT1G01630 "AT1G01630" [Arabido	0.587	0.658	0.247	2.6e-15
MGI|MGI:1924013	518	Mospd2 "motile sperm domain co	0.660	0.364	0.269	2.5e-13
DICTYBASE|DDB_G0293606	351	DDB_G0293606 "cellular retinal	0.555	0.452	0.287	3.2e-13
UNIPROTKB|A6QQK3	492	MOSPD2 "MOSPD2 protein" [Bos t	0.685	0.398	0.258	4.3e-13
TAIR|locus:2025202	296	AT1G75170 "AT1G75170" [Arabido	0.699	0.675	0.262	4.5e-13
UNIPROTKB|Q8NHP6	518	MOSPD2 "Motile sperm domain-co	0.685	0.378	0.253	6.4e-13

TAIR|locus:2161942 AT5G63060 "AT5G63060" [Arabidopsis thaliana (taxid:3702)]

 Score = 802 (287.4 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
 Identities = 147/223 (65%), Positives = 181/223 (81%)

Query:    13 FVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMI 72
             F SS  L     RN +  V++C S+   + KLVL+VKERL KD  SLP+GK GRDDEDMI
Sbjct:    16 FKSSKNLNINRSRNCRFSVRSCVSESQHAHKLVLEVKERLAKDCTSLPLGKYGRDDEDMI 75

Query:    73 LWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPV 132
             LWFLKDR+FS++E++ KLTKAIKWR EF+V EL+EDS++   ++GKAYVH FLD+  RPV
Sbjct:    76 LWFLKDRRFSVDEAIGKLTKAIKWRHEFKVDELSEDSIKAATDTGKAYVHGFLDVKGRPV 135

Query:   133 LIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLT 192
             +IV  +KH+P + DP+EDEKLCVF +EKALSKLP G+ +ILGI DLRGFG++NADLKFLT
Sbjct:   136 VIVAPAKHIPGLLDPIEDEKLCVFLLEKALSKLPAGQHKILGIFDLRGFGSQNADLKFLT 195

Query:   193 FLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASL 235
             FLFDVFYYY+P RL EVLFV+APF+F+P WQ TKPL+K YASL
Sbjct:   196 FLFDVFYYYYPSRLDEVLFVDAPFIFQPIWQFTKPLVKQYASL 238

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2138606 AT4G08690 "AT4G08690" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 57/202 (28%), Positives = 106/202 (52%)

Query:    30 PVKNCQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAK 89
             PV N    P  + +   +++E + K    LP   +    +D +L +L+ R + ++++   
Sbjct:     5 PVTNGFVKPVPTEEEQAKIEE-VRKLLGPLPEKLSSFCSDDAVLRYLRARNWHVKKATKM 63

Query:    90 LTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVAS-KHLPAVHDPV 148
             L + +KWR +++  E+  + V G AE+GK Y    +D   RPVLI+  S ++  +V   +
Sbjct:    64 LKETLKWRVQYKPEEICWEEVAGEAETGKIYRSSCVDKLGRPVLIMRPSVENSKSVKGQI 123

Query:   149 EDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGE 208
                +  V+ +E A+  LPPG+EQ++ +ID  G+   N  L+       V   ++P+RL  
Sbjct:   124 ---RYLVYCMENAVQNLPPGEEQMVWMIDFHGYSLANVSLRTTKETAHVLQEHYPERLAF 180

Query:   209 VLFVEAPFVFKPFWQLTKPLLK 230
              +    P  F+PFW++ +P L+
Sbjct:   181 AVLYNPPKFFEPFWKVARPFLE 202

GO:0005215 "transporter activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006810 "transport" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

DICTYBASE|DDB_G0275959 DDB_G0275959 "cellular retinaldehyde-binding/triple function domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 62/205 (30%), Positives = 105/205 (51%)

Query:    38 PHESRKLVLQVKERLEKDYNSLPVGKNGRD-DEDMILWFLKDRKFSIEESLAKLTKAIKW 96
             P +  +L + +K ++  + N   V K  +  D+ M L FL+ RK+++++S   L +A+K+
Sbjct:    10 PEQEHQLGI-IKSKIA-EINDPVVEKEIQQLDDSMTLRFLRARKWNLKDSFDMLYEALKF 67

Query:    97 RQEFR---VSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKL 153
             R  F+   V  + E  V    +SGK+Y H  +D   RPV IV  S+H     D  E  + 
Sbjct:    68 RATFQDVGVEGITESMVVNELKSGKSYFHG-VDKGGRPVCIVKTSRHDSYNRDLNESMRY 126

Query:   154 CVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVE 213
             CV+ +E   S L  G E    I D+  F ++N D   + F+ ++F  ++P+ L + L + 
Sbjct:   127 CVYVMENGKSMLKDGIETCTLIFDMSDFSSKNMDYPLVKFMVELFQKFYPESLQKCLILN 186

Query:   214 APFVFKPFWQLTKPLLKSYASLKPS 238
             AP++F   W + K  L    + K S
Sbjct:   187 APWIFMGIWHIIKHWLDPNTASKVS 211

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-041114-1 mospd2 "motile sperm domain containing 2" [Danio rerio (taxid:7955)]

 Score = 212 (79.7 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 50/185 (27%), Positives = 97/185 (52%)

Query:    46 LQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSEL 105
             ++ +E  EK Y+S  V K  RDD  ++  +L  R F +E++L  + ++++WR+EF V++L
Sbjct:    29 VEAQESQEK-YDSRDVEKLFRDDA-LVEGYLTWRHFIVEDTLKMIDESLQWRREFSVNDL 86

Query:   106 NEDSV-RGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSK 164
              E S+ R + E G  Y+H + D     +       H+      ++ ++   F++E+  +K
Sbjct:    87 TESSIPRWMFEIGAVYLHGY-DKEGNKLFWFKVKLHIKDPKTVLDKKRYVAFWLER-YAK 144

Query:   165 LPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQL 224
               PG    + + D+   G  N D+ F+ ++   F  Y+PK L +++  E P++    W++
Sbjct:   145 REPGMPLTV-VFDMSESGLSNIDMDFVKYIISCFKVYYPKFLSKMIMYEMPWIMNAAWKI 203

Query:   225 TKPLL 229
              K  L
Sbjct:   204 VKTWL 208

GO:0005198 "structural molecule activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2198135 AT1G01630 "AT1G01630" [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 42/170 (24%), Positives = 83/170 (48%)

Query:    68 DEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVS-ELNEDSVRGIAESGKAYVHDFLD 126
             D+ MI  FL+ R   IE++       + W++       + E  +       K  +    D
Sbjct:    49 DDLMIRRFLRARDLDIEKASTMFLNYLTWKRSMLPKGHIPEAEIANDLSHNKMCMQGH-D 107

Query:   127 INERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENA 186
                RP+ + + ++H P+  +P E ++  V+ +EK  +++P G+E+ + I DL+G+G  N 
Sbjct:   108 KMGRPIAVAIGNRHNPSKGNPDEFKRFVVYTLEKICARMPRGQEKFVAIGDLQGWGYSNC 167

Query:   187 DLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYASLK 236
             D++            +P+RLG++  V AP++F   W++  P + +    K
Sbjct:   168 DIRGYLAALSTLQDCYPERLGKLYIVHAPYIFMTAWKVIYPFIDANTKKK 217

GO:0005215 "transporter activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006810 "transport" evidence=ISS

GO:0019344 "cysteine biosynthetic process" evidence=RCA

MGI|MGI:1924013 Mospd2 "motile sperm domain containing 2" [Mus musculus (taxid:10090)]

 Score = 195 (73.7 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 53/197 (26%), Positives = 106/197 (53%)

Query:    48 VKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNE 107
             V E+ EK Y+S  V +  +DD + +  +L  R   ++E+L  L ++ +WR+EF V++L+E
Sbjct:    25 VTEKSEK-YDSRDVERLQQDD-NWVESYLYWRHNVVDETLKMLDESFQWRKEFSVNDLSE 82

Query:   108 DSV-RGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLP 166
              S+ R + E G  Y+H + D     +  +    H+      ++ +KL  F++E+  +K  
Sbjct:    83 SSIPRWLLELGGIYLHGY-DKEGNKLFWIRVKYHIKDQKTIMDKKKLIAFWLER-YAKRE 140

Query:   167 PGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTK 226
              GK  I  + D+   G  + D+ F+ F+ + F  Y+PK L +++  + P++    +++ K
Sbjct:   141 NGKP-ITVMFDMSETGLNSIDMDFVRFIINCFKVYYPKYLSKIVIFDMPWIMNAAFKIVK 199

Query:   227 PLL--KSYASLKPSGRN 241
               L  ++ + LK + +N
Sbjct:   200 SWLGPEAVSLLKFTSKN 216

GO:0003674 "molecular_function" evidence=ND

GO:0005198 "structural molecule activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0293606 DDB_G0293606 "cellular retinaldehyde-binding/triple function domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 191 (72.3 bits), Expect = 3.2e-13, P = 3.2e-13
 Identities = 48/167 (28%), Positives = 84/167 (50%)

Query:    67 DDEDMILW-FLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFL 125
             D  DM+L  +L+ R + +  S   L   ++WR +++  E+  +S+   A SGK YV  F 
Sbjct:   112 DGGDMLLLRYLRARDYDLSLSFNLLKNTLEWRSKYKPYEITAESLSYEASSGKQYV--FG 169

Query:   126 DINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPP--GKEQILGIIDLRGFGT 183
               + R V+ +   +     HD     +L V+ IE+A+S +    G EQI+ +ID + +  
Sbjct:   170 KSHGRSVIYLRPVRENTKNHD--NQIRLMVYNIERAISLMDKTRGHEQIVLLIDFKNYSI 227

Query:   184 ENAD-LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
              N+  +    ++  +   ++P+RLG    VE PF+F  FW    P +
Sbjct:   228 RNSPPMSVSKYVLQILSDHYPERLGNAFLVETPFIFNVFWTTISPFI 274

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

UNIPROTKB|A6QQK3 MOSPD2 "MOSPD2 protein" [Bos taurus (taxid:9913)]

 Score = 193 (73.0 bits), Expect = 4.3e-13, P = 4.3e-13
 Identities = 54/209 (25%), Positives = 108/209 (51%)

Query:    43 KLVLQVKERLEKDYNSLPVGK-NGRD------DEDMILWFLKDRKFSIEESLAKLTKAIK 95
             +L+ +V+ R E +Y +    K + RD      D++ +  +L  R   I+E+L  L ++ +
Sbjct:    17 RLISEVRRRFEAEYVTDKSDKYDSRDVERLQQDDNWVESYLAWRHNVIDETLKMLDESFQ 76

Query:    96 WRQEFRVSELNEDSV-RGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLC 154
             WR+E  V++L E S+ R + E G  Y+H + D     +  +    H+      ++ +KL 
Sbjct:    77 WRKEMAVNDLTEASIPRWLLEIGGIYLHGY-DKEGNKLFWIRVKYHIKDHKTMLDKKKLI 135

Query:   155 VFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEA 214
              F++E+  +K   GK  +  + DL   G  N D+ F+ F+ + F  Y+PK L +++  + 
Sbjct:   136 AFWLER-YAKRENGKP-VTVMFDLSETGLNNIDMDFVRFIINCFKVYYPKYLSKIVIFDM 193

Query:   215 PFVFKPFWQLTKPLL--KSYASLKPSGRN 241
             P++    +++ K  L  ++ + LK + +N
Sbjct:   194 PWIMNAAFKIVKTWLGPEAVSLLKFTSKN 222

GO:0005198 "structural molecule activity" evidence=IEA

TAIR|locus:2025202 AT1G75170 "AT1G75170" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 4.5e-13, P = 4.5e-13
 Identities = 56/213 (26%), Positives = 102/213 (47%)

Query:    32 KNCQSDPHESRKLVLQVKERLEKDYNSLPVGK-NGRDD---EDMILW-FLKDRKFSIEES 86
             KN      E ++  L  +E   K+  +L +G+ +GR+     D  L  +L+ R +++ ++
Sbjct:     5 KNSSQTEQEQKEAAL--REAKMKELKTL-IGQLSGRNSLYCSDACLKRYLEARNWNVGKA 61

Query:    87 LAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHD 146
                L + +KWR  F+  E+  + V G  E+GK Y   F D + R VLI+     L     
Sbjct:    62 KKMLEETLKWRSSFKPEEIRWNEVSGEGETGKVYKAGFHDRHGRTVLILRPG--LQNTKS 119

Query:   147 PVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFG-TENADLKFLTFLFDVFYYYHPKR 205
                  K  V+ IE A+  LP  +EQ+  +ID  G+  + +  +K      ++   ++P+R
Sbjct:   120 LENQMKHLVYLIENAILNLPEDQEQMSWLIDFTGWSMSTSVPIKSARETINILQNHYPER 179

Query:   206 LGEVLFVEAPFVFKPFWQLTKPLL--KSYASLK 236
             L        P +F+ FW++ K  +  K++  +K
Sbjct:   180 LAVAFLYNPPRLFEAFWKIVKYFIDAKTFVKVK 212

GO:0005215 "transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=ISS

UNIPROTKB|Q8NHP6 MOSPD2 "Motile sperm domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 192 (72.6 bits), Expect = 6.4e-13, P = 6.4e-13
 Identities = 53/209 (25%), Positives = 108/209 (51%)

Query:    43 KLVLQVKERLEKDYNSLPVGK-NGRD------DEDMILWFLKDRKFSIEESLAKLTKAIK 95
             KL+ + + R E +Y +    K + RD      D++ +  +L  R   ++E+L  L ++ +
Sbjct:    11 KLISETRRRFEAEYVTDKSDKYDARDVERLQQDDNWVESYLSWRHNIVDETLKMLDESFQ 70

Query:    96 WRQEFRVSELNEDSV-RGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLC 154
             WR+E  V++LNE S+ R + E G  Y+H + D     +  +    H+      ++ +KL 
Sbjct:    71 WRKEISVNDLNESSIPRWLLEIGVIYLHGY-DKEGNKLFWIRVKYHVKDQKTILDKKKLI 129

Query:   155 VFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEA 214
              F++E+  +K   GK  +  + DL   G  + D+ F+ F+ + F  Y+PK L +++  + 
Sbjct:   130 AFWLER-YAKRENGKP-VTVMFDLSETGINSIDMDFVRFIINCFKVYYPKYLSKIVIFDM 187

Query:   215 PFVFKPFWQLTKPLL--KSYASLKPSGRN 241
             P++    +++ K  L  ++ + LK + +N
Sbjct:   188 PWLMNAAFKIVKTWLGPEAVSLLKFTSKN 216

GO:0005198 "structural molecule activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	286
smart00516	158	smart00516, SEC14, Domain in homologues of a S	2e-18
cd00170	157	cd00170, SEC14, Sec14p-like lipid-binding domain	1e-17
pfam00650	152	pfam00650, CRAL_TRIO, CRAL/TRIO domain	1e-16
pfam13716	149	pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain	3e-06

>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S

 Score = 80.0 bits (198), Expect = 2e-18
 Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 115 ESGKAYVHDFL--DINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALS--KLPPGKE 170
           E  KAY+      D + RPVLI  A +         E  +  V+ +EK L   K   G E
Sbjct: 3   ELLKAYIPGGRGYDKDGRPVLIERAGRFDLKSVTLEELLRYLVYVLEKILQEEKKTGGIE 62

Query: 171 QILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLK 230
               I DL+G    N DL  L  +  +   ++P+RLG+V  +  P+ F+  W++ KP L 
Sbjct: 63  GFTVIFDLKGLSMSNPDLSVLRKILKILQDHYPERLGKVYIINPPWFFRVLWKIIKPFLD 122

Query: 231 S 231
            
Sbjct: 123 E 123

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158

>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain

 Score = 77.8 bits (192), Expect = 1e-17
 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 3/122 (2%)

Query: 113 IAESGKAYVHDFLDINERPVLIVVA-SKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQ 171
           + E GK       D   RPVLI+ A +K L    D  E  +  V+ +EK L +     E 
Sbjct: 4   LKELGKVGYLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQEDDEQVEG 63

Query: 172 ILGIIDLRGFGTENA--DLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
            + IIDL+G    +   D   L  +  +    +P+RL  V  +  P+ FK  W++ KP L
Sbjct: 64  FVVIIDLKGLSLSHLLPDPSLLKKILKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFL 123

Query: 230 KS 231
             
Sbjct: 124 SE 125

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157

>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain

 Score = 75.0 bits (185), Expect = 1e-16
 Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 5/119 (4%)

Query: 116 SGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGK-EQILG 174
            GK Y+H   D   RPVL +   +H P      E  +  V  +E+AL  LP G+ E I  
Sbjct: 1   GGKGYLHGR-DKEGRPVLYLRPGRHDPKKSSLEELVRFLVLVLERALLLLPEGQIEGITV 59

Query: 175 IIDLRGFGTENAD---LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLK 230
           IID++G    N D   + FL  +  +    +P+RLG++L V AP++F   W+L KP L 
Sbjct: 60  IIDMKGLSLSNMDKWPISFLKKILKILQDNYPERLGKILIVNAPWIFNVIWKLIKPFLD 118

Length = 152

>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 5/105 (4%)

Query: 126 DINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTEN 185
           D   RPVL+  A K LPA    ++D    +F++   LS+    K  ++ +ID  G     
Sbjct: 9   DKEGRPVLVFDA-KRLPA--SDLDDLDRLLFYLLSILSEELKPKGFVV-VIDHTGVTRNK 64

Query: 186 ADLKFLTFLFDVFYYYHPKRLGEVLFV-EAPFVFKPFWQLTKPLL 229
               +L  L+ +     PK L  V  V  + F+ K    L +   
Sbjct: 65  PSWSWLKKLYKLLPRAFPKNLKAVYIVHPSTFLKKFLKTLGRLFS 109

This family includes divergent members of the CRAL-TRIO domain family. This family includes ECM25 that contains a divergent CRAL-TRIO domain identified by Gallego and colleagues. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	286
KOG1470	324	consensus Phosphatidylinositol transfer protein PD	100.0
KOG1471	317	consensus Phosphatidylinositol transfer protein SE	100.0
PF00650	159	CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T	99.97
smart00516	158	SEC14 Domain in homologues of a S. cerevisiae phos	99.96
cd00170	157	SEC14 Sec14p-like lipid-binding domain. Found in s	99.94
PF13716	149	CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q	99.51
PF03765	55	CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr	98.91
KOG4406	467	consensus CDC42 Rho GTPase-activating protein [Sig	98.28
PF14555	43	UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A	89.4
PF02845	42	CUE: CUE domain; InterPro: IPR003892 This domain m	86.46
smart00546	43	CUE Domain that may be involved in binding ubiquit	84.27

>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism]

Probab=100.00  E-value=9.1e-46  Score=323.07  Aligned_cols=205  Identities=32%  Similarity=0.544  Sum_probs=190.7

Q ss_pred             CCCCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcCCCC-CChhhhHHHHhcCceeeccCCCCCCCcEEEEEcCCCCCC
Q 023175           65 GRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSE-LNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPA  143 (286)
Q Consensus        65 ~~~~d~~LlRFLra~~~dv~~A~~~l~~~~~wR~~~~~~~-l~~~~~~~~l~~~~~~~~g~~D~~Grpv~~~~~~~~~~~  143 (286)
                      ..++|.+++|||||++||+++|.++|.+++.||+.+++.. +..+++..++++|.+|++| .|++||||+|+++..+.++
T Consensus        45 ~~~~d~cllRfLrAr~wnv~kA~kml~~tL~WR~~~~~~~~~~~~Ev~~e~~tGK~yi~G-~D~~gRPVl~~~~~~~~qn  123 (324)
T KOG1470|consen   45 KWCSDACLLRFLRARKWNVKKASKMLSNTLKWRRSFGPEEVIEADEVAAELETGKAYILG-HDKDGRPVLYLRPRPHRQN  123 (324)
T ss_pred             hcCcHHHHHHHHHHcCCcHHHHHHHHHHHhHHHHhcCCccccCHHHHHHHhhcCcEEEec-ccCCCCeEEEEecCCCCCC
Confidence            5679999999999999999999999999999999999988 8888899999999999999 7999999999988888778


Q ss_pred             CCChHHHHHHHHHHHHHHHHhCCCCcccEEEEEeCCCCCCCCCCHHHHHHHHHHHhhhcccccccEEEEeCCcchHHHHH
Q 023175          144 VHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQ  223 (286)
Q Consensus       144 ~~~~~~~~r~~~~~lE~~~~~~~~~~~g~~vIiD~~g~s~~~~~~~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~  223 (286)
                      ..+.+...|+++|+||.++..++.+++++++++|++|+|++|++.+..+.++.++|+|||+||+.++++|+||+|..+|+
T Consensus       124 ~~t~~~~~r~~Vy~mE~Ai~~lp~~qe~~~~L~D~~~fs~sN~d~~~~k~~~~~lq~hYPErLg~a~l~~~P~iF~~~wk  203 (324)
T KOG1470|consen  124 TKTQKELERLLVYTLENAILFLPPGQEQFVWLFDLTGFSMSNPDIKFLKELLHILQDHYPERLGKALLVNAPWIFQPFWK  203 (324)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCCCCcceEEEEEecccCcccCCCcHHHHHHHHHHHHhChHHhhhhhhcCChHHHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhhcccccc-cceeeccCCcchhhHHHHhhhhcCccccchhcCCCccchhhhcc
Q 023175          224 LTKPLLKSYA-SLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAALAGLIFAQTV  277 (286)
Q Consensus       224 lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~~~i~~~~LP~~~GG~~~~~~~~~~  277 (286)
                      ++||||+++| +||.|+.+.   ++    +.+++|+++||..|||+..+.+.+.+
T Consensus       204 iikpflDp~t~~Kv~F~~~~---~~----l~~~~d~~~l~s~~GG~~~~~y~~e~  251 (324)
T KOG1470|consen  204 IIKPFLDPKTASKVKFVEPK---DD----LSEYFDESQLPSLFGGKLLFEYTHEE  251 (324)
T ss_pred             HhhhccChhhhceeEEecCh---hH----HHhhCCccccchhhCCCcccccCCcc
Confidence            9999999999 599998764   22    67899999999999996666555443

>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism]

Probab=100.00  E-value=4.9e-37  Score=276.82  Aligned_cols=230  Identities=22%  Similarity=0.334  Sum_probs=183.9

Q ss_pred             CCCCCChHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcCCCCCChh-hh
Q 023175           32 KNCQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNED-SV  110 (286)
Q Consensus        32 ~e~~~~~e~~~~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~~~wR~~~~~~~l~~~-~~  110 (286)
                      .+.++.++..++.++++| |+..+ ++++   ....+|..|+|||||++||+++|.+++.+++.||+++..+.+..+ ..
T Consensus        13 ~~~~~~~~~~~~~i~~lr-~~~~~-~~l~---~~~~~d~~LlRfLra~~f~ve~a~~~l~~~l~~r~~~~~d~i~~~~~~   87 (317)
T KOG1471|consen   13 EELNEITESEEAVIAQLR-WLLQK-PHLP---NKYDDDFNLLRFLRARKFDVEKAKQMLKRYLNWRKRNKLDEIFEDFEE   87 (317)
T ss_pred             cccCCCcHHHHHHHHHHH-HHhhc-cCCC---CCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCCccHhhcccc
Confidence            466776777788999999 66554 5665   247899999999999999999999999999999999998876654 11


Q ss_pred             HHHH-hcCceeeccCCCCCCCcEEEEEcCCCCCC----CCChHHHHHHHH--------HHHHHHHHhCCCCcccEEEEEe
Q 023175          111 RGIA-ESGKAYVHDFLDINERPVLIVVASKHLPA----VHDPVEDEKLCV--------FFIEKALSKLPPGKEQILGIID  177 (286)
Q Consensus       111 ~~~l-~~~~~~~~g~~D~~Grpv~~~~~~~~~~~----~~~~~~~~r~~~--------~~lE~~~~~~~~~~~g~~vIiD  177 (286)
                      ...+ .......+| .|++|+|+++.+.|..+..    .....+..++.+        ..+|......+.+++|++.|+|
T Consensus        88 ~~~~~~~~~~~~~~-~~~~g~~v~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~~~I~D  166 (317)
T KOG1471|consen   88 DDELLKYYPQGLHG-VDKEGRPVYIERLGKIDPKGLLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGIVTIFD  166 (317)
T ss_pred             chhhhhhccccccc-cCCCCCEEEEeccCCCCcccceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeEEEEE
Confidence            1222 223456677 7999999999999987553    234455555544        4444444444567999999999


Q ss_pred             CCCCCCCCC---CHHHHHHHHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhh
Q 023175          178 LRGFGTENA---DLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLE  253 (286)
Q Consensus       178 ~~g~s~~~~---~~~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~  253 (286)
                      ++|++++|+   .+..++.++.++|++||++++++||||+|++|+++|+++||||+++| +||++.+     +...+.|.
T Consensus       167 l~G~~~~~~~~~~~~~~~~~~~~~q~~yPe~l~~~~iIN~P~~f~~~~~~ikpfL~~kt~~ki~~~~-----~~~~~~L~  241 (317)
T KOG1471|consen  167 LKGVSLSHLLKPAPTLLKKILKILQDNYPERLKRIHIINAPTIFSALWKVVKPFLDEKTRKKIHVLH-----SKDKESLL  241 (317)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHhCHHhhceEEEEcCchhHHHHHHHHhccCCHHHHhhheecC-----CCchhhhh
Confidence            999999987   36899999999999999999999999999999999999999999999 4888332     33456688


Q ss_pred             hhcCccccchhcCCCccch
Q 023175          254 SRLLVKSLHSCLAALAGLI  272 (286)
Q Consensus       254 ~~i~~~~LP~~~GG~~~~~  272 (286)
                      +.++++.||.+|||+++..
T Consensus       242 k~i~~~~LP~~yGG~~~~~  260 (317)
T KOG1471|consen  242 KYIPPEVLPEEYGGTCGDL  260 (317)
T ss_pred             hhCCHhhCccccCCCcccc
Confidence            9999999999999999875

>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=99.97  E-value=3.4e-32  Score=220.92  Aligned_cols=151  Identities=26%  Similarity=0.488  Sum_probs=125.4

Q ss_pred             HHhcCceeeccCCCCCCCcEEEEEcCCCCCCCCChHHHHHHHHHHHHHHHHhCC--CCcccEEEEEeCCCCCCCCCC---
Q 023175          113 IAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLP--PGKEQILGIIDLRGFGTENAD---  187 (286)
Q Consensus       113 ~l~~~~~~~~g~~D~~Grpv~~~~~~~~~~~~~~~~~~~r~~~~~lE~~~~~~~--~~~~g~~vIiD~~g~s~~~~~---  187 (286)
                      .++.+..+++| +|++||||++++++++++...+.+++.+++++.+|.+++.++  .+.+|+++|+|++|+++++++   
T Consensus         3 ~~~~~~~~~~g-~D~~gr~v~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~iiD~~g~~~~~~~~~~   81 (159)
T PF00650_consen    3 ILKSGPFYLHG-RDKDGRPVIYIRLGRFDPKKFSPEDVIRFFVYLLERMLKRMPEGGQVEGIVVIIDLSGFSLSNFDWWP   81 (159)
T ss_dssp             HHTTSCEEEEE-E-TTS-EEEEEEGTT--HHTS-HHHHHHHHHHHHHHHHHTHHHTSHHH-EEEEEE-TT--HHHHHCHH
T ss_pred             HHCCeeEEECC-CCCCcCEEEEEEcccCCCCcCCHHHHHHHHHHHHHHHHhhhcccccceeEEEEEeCCCceEeccccch
Confidence            45678889999 799999999999999988888899999999999999986554  478999999999999999887   


Q ss_pred             HHHHHHHHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhhhhcCccccchhcC
Q 023175          188 LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLESRLLVKSLHSCLA  266 (286)
Q Consensus       188 ~~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~~~i~~~~LP~~~G  266 (286)
                      .+.++.+++++|++||+|++++|++|+|++|+++|++++|||+++| +||+++++.    +....|.+++++++||.+||
T Consensus        82 ~~~~k~~~~~~~~~yP~rl~~i~iin~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~----~~~~~l~~~i~~~~lP~~~G  157 (159)
T PF00650_consen   82 ISFLKKIIQLLQDHYPERLGKIYIINAPWFFRVLWKIVKPFLSPKTREKIVFHSGS----DWKAKLKEYIDPEQLPVEYG  157 (159)
T ss_dssp             HHHHHHHHHHHHHHSTTTEEEEEEES--TTHHHHHHHHGGGS-HHHHCTEEEECTT----CHCHHHCCCSTGGGSBGGGT
T ss_pred             hhhhhhhhhhhcccCCccceeEEEEecChhhhhhHhHHHhhcCHhhheeEEEECCc----ccHHHHHhhCCHhHCchhcC
Confidence            8999999999999999999999999999999999999999999999 599999653    33346889999999999999


Q ss_pred             CC
Q 023175          267 AL  268 (286)
Q Consensus       267 G~  268 (286)
                      |+
T Consensus       158 G~  159 (159)
T PF00650_consen  158 GT  159 (159)
T ss_dssp             SS
T ss_pred             CC
Confidence            97

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1OLM_E 1O6U_E 3Q8G_A 3B7Q_B 3B7Z_A ....

>smart00516 SEC14 Domain in homologues of a S

Probab=99.96  E-value=1.4e-28  Score=199.40  Aligned_cols=142  Identities=27%  Similarity=0.383  Sum_probs=130.7

Q ss_pred             cCCCCCCCcEEEEEcCCCCCCCCChHHHHHHHHHHHHHHHHh--CCCCcccEEEEEeCCCCCCCCCCHHHHHHHHHHHhh
Q 023175          123 DFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSK--LPPGKEQILGIIDLRGFGTENADLKFLTFLFDVFYY  200 (286)
Q Consensus       123 g~~D~~Grpv~~~~~~~~~~~~~~~~~~~r~~~~~lE~~~~~--~~~~~~g~~vIiD~~g~s~~~~~~~~~k~~~~~lq~  200 (286)
                      | +|++||||++++++++++...+.+++++++++.+|.+++.  .+.+++|+++|+|++|++++|++++.++.+++++++
T Consensus        14 g-~D~~GrpV~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~lk~~~~~~~~   92 (158)
T smart00516       14 G-YDKDGRPVLIFRAGRFDLKSVTLEELLRYLVYVLEKILQREKKTGGIEGFTVIFDLKGLSMSNPDLSVLRKILKILQD   92 (158)
T ss_pred             C-CCCCcCEEEEEeccccccCcCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEEEEECCCCCcccccHHHHHHHHHHHHH
Confidence            6 7999999999999998888899999999999999999876  567789999999999999999999999999999999


Q ss_pred             hcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhhhhcCccccchhcCCCcc
Q 023175          201 YHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAALAG  270 (286)
Q Consensus       201 ~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~~~i~~~~LP~~~GG~~~  270 (286)
                      +||+|++++||+|+|++++.+|+++++|+++++ +||+++++.     ..+.|.+.+++++||++|||++.
T Consensus        93 ~yp~~l~~i~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~-----~~~~L~~~i~~~~lP~~~GG~~~  158 (158)
T smart00516       93 HYPERLGKVLIINPPWFFRVLWKIIKPFLDEKTREKIRFVGND-----SKEELLEYIDPEQLPEELGGTLD  158 (158)
T ss_pred             HhHHHhCeEEEECCCHHHHHHHHHHHhhcChhhhccEEEeCCC-----CHHHHHhhCCHhhCcHhhCCCCC
Confidence            999999999999999999999999999999998 599998752     24457788999999999999863

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>cd00170 SEC14 Sec14p-like lipid-binding domain

Probab=99.94  E-value=3e-26  Score=184.33  Aligned_cols=145  Identities=24%  Similarity=0.288  Sum_probs=126.5

Q ss_pred             ceeeccCCCCCCCcEEEEEcCCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCcccEEEEEeCCCCCCCCC--CHHHHHHH
Q 023175          118 KAYVHDFLDINERPVLIVVASKHLP-AVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENA--DLKFLTFL  194 (286)
Q Consensus       118 ~~~~~g~~D~~Grpv~~~~~~~~~~-~~~~~~~~~r~~~~~lE~~~~~~~~~~~g~~vIiD~~g~s~~~~--~~~~~k~~  194 (286)
                      .++..|++|++||||+++++++.+. ...+.++.+++.++.+|.+++.+..+.+|+++|+|++|.+++++  +.+.++.+
T Consensus         9 ~~~~~~~~D~~gr~V~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~~~~k~~   88 (157)
T cd00170           9 KVGYLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQEDDEQVEGFVVIIDLKGLSLSHLLPDPSLLKKI   88 (157)
T ss_pred             cccccCCCCCCcCEEEEEecCCcchhhcCCHHHHHHHHHHHHHHHHhhhhhcccceEEEEECCCCChhccchhHHHHHHH
Confidence            3444444899999999999996433 34455889999999999998887776689999999999999998  78899999


Q ss_pred             HHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhhhhcCccccchhcCCC
Q 023175          195 FDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAAL  268 (286)
Q Consensus       195 ~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~~~i~~~~LP~~~GG~  268 (286)
                      +++++++||++++++|++|+|++++.+|+++++|+++++ +||+++++.      .+.|.+++++++||.+|||+
T Consensus        89 ~~~~~~~yp~~l~~v~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~------~~~L~~~i~~~~Lp~~~GG~  157 (157)
T cd00170          89 LKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKTRKKIVFLGSD------KEELLKYIDKEQLPEEYGGT  157 (157)
T ss_pred             HHHHHHhChHhhCeEEEECCCHhHHHHHHHHHHhcCHhhhhhEEEecCC------HHHHHhhCChhhCcHhhCCC
Confidence            999999999999999999999999999999999999998 599998642      44577899999999999996

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A

Probab=99.51  E-value=1.9e-14  Score=115.64  Aligned_cols=138  Identities=20%  Similarity=0.315  Sum_probs=92.5

Q ss_pred             eeccCCCCCCCcEEEEEcCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcccEEEEEeCCCCCCCCC-CHHHHHHHHHHH
Q 023175          120 YVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENA-DLKFLTFLFDVF  198 (286)
Q Consensus       120 ~~~g~~D~~Grpv~~~~~~~~~~~~~~~~~~~r~~~~~lE~~~~~~~~~~~g~~vIiD~~g~s~~~~-~~~~~k~~~~~l  198 (286)
                      +..| +|++||||+++...+. +   +.+++.+++.|++......  ....++++|+|++|.+..+. +...++.+.+.+
T Consensus         5 ~~gG-~d~~g~pV~~~~~~~~-~---~~~~~~~ll~yl~~~l~~~--~~~~~f~vVid~~~~~~~~~~~~~~l~~~~~~l   77 (149)
T PF13716_consen    5 YPGG-RDREGRPVVVFIASRL-P---SSDDLERLLLYLLSTLSEE--VVDKPFSVVIDHTGFSRSSEPSLSWLKQLYKLL   77 (149)
T ss_dssp             EEEE-EBTTS-EEEEEEGGG--C----TTHHHHHHHHHHHHH-TT--TTTS-EEEEEE-TT--GGG---HHHHHHTTTSS
T ss_pred             Eecc-cCCCcCEEEEEECCcC-c---chhhHHHHHHHHHHhhhHH--hcCCCEEEEEEcCCCccccCCchHHHHHHHHHH
Confidence            4445 8999999999997766 3   2336666777766654222  34567999999999997654 689999999999


Q ss_pred             hhhcccccccEEEEeCCcchHHHH-HHhhhcccccc--cceeeccCCcchhhHHHHhhhhcCccccchhcCCCccc
Q 023175          199 YYYHPKRLGEVLFVEAPFVFKPFW-QLTKPLLKSYA--SLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAALAGL  271 (286)
Q Consensus       199 q~~yP~rl~~i~iiN~P~~f~~~w-~lvkpfL~~~t--~ki~~~~~~~~~~~~~~~l~~~i~~~~LP~~~GG~~~~  271 (286)
                      ...|+..++++||+|++++++.++ .+.+++.+.+.  +|+.++.+-       ..|.+++++++||..+||+.+.
T Consensus        78 ~~~~~~nl~~vyiv~p~~~~k~~~~~~~~~~~~~~~~~~kv~~~~sl-------~~L~~~i~~~qL~~~lp~~~~~  146 (149)
T PF13716_consen   78 PRKYKKNLKKVYIVHPNWFLKKILATLLRPFVSSKFWKKKVVYVSSL-------SELSKHIDPSQLPESLPGVLQY  146 (149)
T ss_dssp             -HHHHHTEEEEEEES--HHHHHHHHHTTTTGGGGTT--TTEEEESST-------CGGGGTSGGGG------HHH--
T ss_pred             HHHHhhceEEEEEECCCHHHHHHHHHHhcccccccccceEEEEECCH-------HHHHhhCCHHHhcccCCCEEec
Confidence            999999999999999999999999 66677778875  488887543       3477899999999999987653

>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=98.91  E-value=3.5e-09  Score=70.17  Aligned_cols=52  Identities=27%  Similarity=0.466  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHHHhhcCC---CCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHH
Q 023175           42 RKLVLQVKERLEKDYNS---LPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKA   93 (286)
Q Consensus        42 ~~~i~~lr~~l~~~~~~---lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~   93 (286)
                      ++++++|++.++.....   ++.......+|.+|+|||||++||+++|.++|.++
T Consensus         1 k~~l~~l~~~l~~~~~~~~~~~~~~~~~~~d~~llRFLRARkf~v~~A~~mL~~t   55 (55)
T PF03765_consen    1 KQKLKQLREHLSELDEKAPGLWDDEKEDHDDNFLLRFLRARKFDVEKAFKMLKKT   55 (55)
T ss_dssp             HHHHHHHHHHHHH--GGGTHHHTTHTSS-SHHHHHHHHHHTTT-HHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhccchhcccccccCCCCHHHHHHHHHHccCCHHHHHHHHHhC
Confidence            36889999999873110   00011256799999999999999999999999875

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1AUA_A 3Q8G_A 3B7Q_B 3B7Z_A 3B7N_A ....

>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton]

Probab=98.28  E-value=7.2e-06  Score=74.17  Aligned_cols=119  Identities=18%  Similarity=0.167  Sum_probs=91.6

Q ss_pred             CceeeccC-CCCCCCcEEEEEcCCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCcccEEEEEeCCCCCCCCCC-HHHHHH
Q 023175          117 GKAYVHDF-LDINERPVLIVVASKHLP-AVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENAD-LKFLTF  193 (286)
Q Consensus       117 ~~~~~~g~-~D~~Grpv~~~~~~~~~~-~~~~~~~~~r~~~~~lE~~~~~~~~~~~g~~vIiD~~g~s~~~~~-~~~~k~  193 (286)
                      ..+.+.|. .|+.||.|+++...+.-+ ++.+-..++++.++.+|..+++-      ++.+.=-.|+...+.+ .+.+..
T Consensus        80 ei~qvi~~~~D~~gr~iivv~a~rlp~~~eld~~~li~~~v~~id~~Ve~D------Yt~vYfh~gl~s~nkp~l~~l~~  153 (467)
T KOG4406|consen   80 EILQVIGDAKDKQGRKIIVVYACRLPSSSELDDIRLISYLVYTIDKYVEND------YTLVYFHHGLPSDNKPYLQLLFD  153 (467)
T ss_pred             heeeeccCcccccCCeeEEEEEecCCchhhhhhHHHHHHHHHHHHHHHhcc------ceeeehhcCCcccccchHHHHHH
Confidence            44455553 599999999999888643 23333347888999999887652      5666666787777775 566666


Q ss_pred             HHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccC
Q 023175          194 LFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRN  241 (286)
Q Consensus       194 ~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~  241 (286)
                      ...-+-.+|---++.+|+|++.|+.+++|+++|||++.|. +|++.+..
T Consensus       154 aYke~Dr~~~KNlKalYvvHptwfikvi~n~~kplIS~KF~rKi~Y~n~  202 (467)
T KOG4406|consen  154 AYKELDRNFKKNLKALYVVHPTWFIKVIWNLFKPLISLKFTRKIIYFNS  202 (467)
T ss_pred             HHHHHHHHHhhhhhheEEecHHHHHHHHHHHHhhhcchhhhceeEEeeh
Confidence            6666777788889999999999999999999999999995 78887754

>PF14555 UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A 2L4F_A 2DZL_A 2L2D_A 2DAM_A 1V92_A 3E21_A

Probab=89.40  E-value=1.4  Score=27.10  Aligned_cols=24  Identities=21%  Similarity=0.494  Sum_probs=20.4

Q ss_pred             CHHHHHHHHhhcCCCHHHHHHHHH
Q 023175           68 DEDMILWFLKDRKFSIEESLAKLT   91 (286)
Q Consensus        68 ~d~~LlRFLra~~~dv~~A~~~l~   91 (286)
                      ++.....||..++||++.|+..+-
T Consensus        14 ~~~~A~~~L~~~~wdle~Av~~y~   37 (43)
T PF14555_consen   14 DEDVAIQYLEANNWDLEAAVNAYF   37 (43)
T ss_dssp             SHHHHHHHHHHTTT-HHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHHHHHHHHH
Confidence            578899999999999999998764

>PF02845 CUE: CUE domain; InterPro: IPR003892 This domain may be involved in binding ubiquitin-conjugating enzymes (UBCs)

Probab=86.46  E-value=3  Score=25.41  Aligned_cols=38  Identities=21%  Similarity=0.291  Sum_probs=28.7

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHH
Q 023175           43 KLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTK   92 (286)
Q Consensus        43 ~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~   92 (286)
                      +.|++|++.+    |        ..+...+..-|..+++|++.|...|-+
T Consensus         3 ~~v~~L~~mF----P--------~~~~~~I~~~L~~~~~~ve~ai~~LL~   40 (42)
T PF02845_consen    3 EMVQQLQEMF----P--------DLDREVIEAVLQANNGDVEAAIDALLE   40 (42)
T ss_dssp             HHHHHHHHHS----S--------SS-HHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHC----C--------CCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence            4556666654    2        457889999999999999999998754

CUE domains also occur in two proteins of the IL-1 signal transduction pathway, tollip and TAB2.; GO: 0005515 protein binding; PDB: 2EKF_A 1OTR_A 1P3Q_Q 1MN3_A 1WGL_A 2EJS_A 2DAE_A 2DHY_A 2DI0_A.

>smart00546 CUE Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs)

Probab=84.27  E-value=4  Score=24.92  Aligned_cols=26  Identities=23%  Similarity=0.299  Sum_probs=22.9

Q ss_pred             CCCHHHHHHHHhhcCCCHHHHHHHHH
Q 023175           66 RDDEDMILWFLKDRKFSIEESLAKLT   91 (286)
Q Consensus        66 ~~~d~~LlRFLra~~~dv~~A~~~l~   91 (286)
                      ..++..+.+-|+++++|++.|.+.|-
T Consensus        15 ~l~~~~I~~~L~~~~g~ve~~i~~LL   40 (43)
T smart00546       15 NLDEEVIKAVLEANNGNVEATINNLL   40 (43)
T ss_pred             CCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            45788999999999999999998875

CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2. Ponting (Biochem. J.) "Proteins of the Endoplasmic reticulum" (in press)

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	286
3q8g_A	320	Resurrection Of A Functional Phosphatidylinositol T		1e-07
3b74_A	320	Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co		2e-07
4fmm_A	360	Dimeric Sec14 Family Homolog 3 From Saccharomyces C		3e-06
1aua_A	296	Phosphatidylinositol Transfer Protein Sec14p From S		4e-05

>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 40  ESRKLVLQVKE-RLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQ 98
           E  + +LQ +   LEK+Y         R D+  +L FL+ RKF I  S+    +  +WR+
Sbjct: 38  EQEEALLQFRSILLEKNYKE-------RLDDSTLLRFLRARKFDINASVEMFVETERWRE 90
Query: 99  EFRVSELNEDSVRG----------IAESGKAYVHDFLDINERPVLIV-VASKHLPAVHDP 147
           E+  + + ED              +A+    Y H  +D + RP+    +   +L  ++  
Sbjct: 91  EYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHH-VDKDGRPLYFAELGGINLKKMYKI 149
Query: 148 VEDEKLCVFFIEK----ALSKLPPGK-------EQILGIIDLRGFGTENAD--LKFLTFL 194
             ++++    +++    A  ++P          E    ++DL+G    NA   L ++  +
Sbjct: 150 TTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHVLSYIKDV 209
Query: 195 FDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
            D+   Y+P+R+G+   + +PF F   +++ KP L
Sbjct: 210 ADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFL 244

>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 40  ESRKLVLQVKE-RLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQ 98
           E  + +LQ +   LEK+Y         R D+  +L FL+ RKF I  S+    +  +WR+
Sbjct: 38  EQEEALLQFRSILLEKNYKE-------RLDDSTLLRFLRARKFDINASVEMFVETERWRE 90
Query: 99  EFRVSELNEDSVRG----------IAESGKAYVHDFLDINERPVLIV-VASKHLPAVHDP 147
           E+  + + ED              +A+    Y H  +D + RP+    +   +L  ++  
Sbjct: 91  EYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHH-VDKDGRPLYFEELGGINLKKMYKI 149
Query: 148 VEDEKLCVFFIEK----ALSKLPPGK-------EQILGIIDLRGFGTENAD--LKFLTFL 194
             ++++    +++    A  ++P          E    ++DL+G    NA   L ++  +
Sbjct: 150 TTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHVLSYIKDV 209
Query: 195 FDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
            D+   Y+P+R+G+   + +PF F   +++ KP L
Sbjct: 210 ADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFL 244

>pdb|4FMM|A Chain A, Dimeric Sec14 Family Homolog 3 From Saccharomyces Cerevisiae Presents Some Novel Features Of Structure That Lead To A Surprising "dimer- Monomer" State Change Induced By Substrate Binding Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 73  LWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIA--------ESGKAYVHDF 124
           L +L+  K+ +++ + ++T  + WR+EF +S L E+    I         ESGK  +  +
Sbjct: 91  LRYLRATKWVLKDCIDRITMTLAWRREFGISHLGEEHGDKITADLVAVENESGKQVILGY 150
Query: 125 LDINERPVLIVVASK-HLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGF-- 181
            + + RP+L +   + +    H  V+     VF +E+ +  +P G++ +  +ID + +  
Sbjct: 151 -ENDARPILYLKPGRQNTKTSHRQVQH---LVFMLERVIDFMPAGQDSLALLIDFKDYPD 206
Query: 182 ------GTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
                  ++   +     +  +   ++P+RLG+ L    P++   F +L  P +
Sbjct: 207 VPKVPGNSKIPPIGVGKEVLHILQTHYPERLGKALLTNIPWLAWTFLKLIHPFI 260

>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 66  RDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFR----VSELNEDSVRGIAESGKAYV 121
           R D+  +L FL+ RKF ++ +        KWR+++     + + + D    IA+    Y 
Sbjct: 49  RLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYY 108
Query: 122 HDFLDINERPVLIV-VASKHLPAVHDPVEDEKLC---VFFIEKALSKLPPGKEQILG--- 174
           H   D + RPV    + + +L  ++    +E++    V+  E  +    P   +  G   
Sbjct: 109 HK-TDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLV 167
Query: 175 -----IIDLRGFGTENADLKFLTFLFDVFYY---YHPKRLGEVLFVEAPFVFKPFWQLTK 226
                I+DL+G    +A    ++++ +  Y    Y+P+R+G+   + APF F   ++L K
Sbjct: 168 ETSCTIMDLKGISISSA-YSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFK 226
Query: 227 PLL 229
           P L
Sbjct: 227 PFL 229

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	286
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	7e-27
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	3e-24
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	8e-24
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	9e-23
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	7e-22
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316

 Score =  105 bits (265), Expect = 7e-27
 Identities = 38/210 (18%), Positives = 73/210 (34%), Gaps = 11/210 (5%)

Query: 32  KNCQSDPHESRKLVLQVKERLEK------DYNSLPVGKNGRDDEDMILWFLKDRKFSIEE 85
                      + V +++E ++       +       +    D    L F++ RKF++  
Sbjct: 49  DELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGR 108

Query: 86  SLAKLTKAIKWRQEFR--VSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPA 143
           +   L   + +R ++      L+ ++VR   E+G   V    D   R V++         
Sbjct: 109 AYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQ 168

Query: 144 VHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENA---DLKFLTFLFDVFYY 200
                E  +   F +EK L            I + +GF  + A       L  + D+   
Sbjct: 169 EITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQD 228

Query: 201 YHPKRLGEVLFVEAPFVFKPFWQLTKPLLK 230
             P     + F+  P+ F   + + KP LK
Sbjct: 229 SFPAWFKAIHFIHQPWYFTTTYNVVKPFLK 258

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320

 Score = 98.8 bits (246), Expect = 3e-24
 Identities = 45/214 (21%), Positives = 83/214 (38%), Gaps = 31/214 (14%)

Query: 40  ESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQE 99
           E  + +LQ +  L +           R D+  +L FL+ RKF I  S+    +  +WR+E
Sbjct: 38  EQEEALLQFRSILLEK------NYKERLDDSTLLRFLRARKFDINASVEMFVETERWREE 91

Query: 100 FRVSELNEDSVRG----------IAESGKAYVHDFLDINERPVLIVVASKHLPAV----- 144
           +  + + ED              +A+    Y H   D + RP+                 
Sbjct: 92  YGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHV-DKDGRPLYFAELGGINLKKMYKIT 150

Query: 145 -------HDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENAD--LKFLTFLF 195
                  +   E E    + +     +     E    ++DL+G    NA   L ++  + 
Sbjct: 151 TEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHVLSYIKDVA 210

Query: 196 DVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
           D+   Y+P+R+G+   + +PF F   +++ KP L
Sbjct: 211 DISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFL 244

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296

 Score = 97.1 bits (242), Expect = 8e-24
 Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 26/211 (12%)

Query: 37  DPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKW 96
           D  + + L  ++++ LE        G   R D+  +L FL+ RKF ++ +        KW
Sbjct: 27  DSAQEKALA-ELRKLLEDA------GFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKW 79

Query: 97  RQEFRVSELNEDSV----RGIAESGKAYVHDFLDINERPVLIV----VASKHLPAVHDPV 148
           R+++    + +D        IA+    Y H   D + RPV       V    +  V    
Sbjct: 80  RKDYGTDTILQDFHYDEKPLIAKFYPQYYHKT-DKDGRPVYFEELGAVNLHEMNKVTSEE 138

Query: 149 EDEKLCVFFIEKALSKLPPGK--------EQILGIIDLRGFGTENAD--LKFLTFLFDVF 198
              K  V+  E  +    P          E    I+DL+G    +A   + ++     + 
Sbjct: 139 RMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYIS 198

Query: 199 YYYHPKRLGEVLFVEAPFVFKPFWQLTKPLL 229
             Y+P+R+G+   + APF F   ++L KP L
Sbjct: 199 QNYYPERMGKFYIINAPFGFSTAFRLFKPFL 229

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262

 Score = 93.5 bits (233), Expect = 9e-23
 Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 5/170 (2%)

Query: 66  RDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFR--VSELNEDSVRGIAESGKAYVHD 123
              +  +L FL+ R F ++ +   L    KWR E     ++L+  S+ G+ ++G   V  
Sbjct: 30  PLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLR 89

Query: 124 FLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGT 183
             D     VLI   +   P V    +  ++ +   E  + ++   +  I  I DL G+  
Sbjct: 90  SRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQF 149

Query: 184 ENA---DLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLK 230
            +A          +  V     P ++  +  +  P +F   + + KP L 
Sbjct: 150 SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLT 199

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403

 Score = 93.1 bits (231), Expect = 7e-22
 Identities = 39/204 (19%), Positives = 83/204 (40%), Gaps = 19/204 (9%)

Query: 40  ESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQE 99
             ++ + + +E ++    +LP       D+  +L +L+ R F +++S A L K +++R++
Sbjct: 11  RQKEALAKFRENVQDVLPALP-----NPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQ 65

Query: 100 FRVSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVA----SKHLPAVHDPVEDEKLCV 155
             +  +       + +   +      D++  PV   +     +K L       +  +  +
Sbjct: 66  KDIDNIISWQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKM 125

Query: 156 FFIEKAL-------SKLPPGKEQILGIIDLRGFGTENAD---LKFLTFLFDVFYYYHPKR 205
              E  L       +KL    E I  I D  G G ++     ++       +F   +P+ 
Sbjct: 126 RECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPET 185

Query: 206 LGEVLFVEAPFVFKPFWQLTKPLL 229
           L  +  V+AP +F   + L KP L
Sbjct: 186 LKRLFVVKAPKLFPVAYNLIKPFL 209

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 4e-04
 Identities = 45/320 (14%), Positives = 93/320 (29%), Gaps = 88/320 (27%)

Query: 1   MALRTCQNFASPFVSSIKLTKKPIRNFKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLP 60
           +AL  C ++           K   + F   +KNC S P    +++ ++  +++ ++ S  
Sbjct: 166 VALDVCLSYK-------VQCKMDFKIFWLNLKNCNS-PETVLEMLQKLLYQIDPNWTSRS 217

Query: 61  VGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDSVRGIAESGKAY 120
                 D    I       K  I    A+L + +K +  +    L   +V+  A++  A+
Sbjct: 218 ------DHSSNI-------KLRIHSIQAELRRLLKSKP-YENCLLVLLNVQ-NAKAWNAF 262

Query: 121 VHDF----L----DINERPVLIVVASKHLPAVHDPV---EDEKLCVF--FIEKALSKLPP 167
             +     L           L    + H+   H  +    DE   +   +++     LP 
Sbjct: 263 --NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 168 GKEQILGIIDLR--GFGTENADLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLT 225
              ++L     R         D                        V          +LT
Sbjct: 321 ---EVLTTNPRRLSIIAESIRD--------------GLATWDNWKHVN-------CDKLT 356

Query: 226 KPLLKSYASLKPS--------------GRNISLKQRC-----QTTLESRLLVKSLHSCLA 266
             +  S   L+P+                +I               +  ++V  LH    
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK--- 413

Query: 267 ALAGLIFAQTVKTYYFVEGL 286
               L+  Q  ++   +  +
Sbjct: 414 --YSLVEKQPKESTISIPSI 431

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	286
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	100.0
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	100.0
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	100.0
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	100.0
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	100.0
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	99.16
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	98.96
1wgl_A	59	TOLL-interacting protein; CUE domain, structural g	88.02
2dhy_A	67	CUE domain-containing protein 1; structural genomi	86.61
2di0_A	71	Activating signal cointegrator 1 complex subunit 2	83.39

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*

Probab=100.00  E-value=2.6e-50  Score=361.38  Aligned_cols=238  Identities=17%  Similarity=0.211  Sum_probs=199.9

Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHhhcCCCCCC-------CCCCCCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHH
Q 023175           27 FKAPVKNCQSDPHESRKLVLQVKERLEKDYNSLPVG-------KNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQE   99 (286)
Q Consensus        27 ~~~~~~e~~~~~e~~~~~i~~lr~~l~~~~~~lp~~-------~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~~~wR~~   99 (286)
                      .+.+++|++|+|+.++++|++||+||+++ ++++..       .....||.+|+||||||+||+++|.++|+++++||++
T Consensus        44 ~~~a~~eL~E~~~~~~~~l~~LR~wi~~~-p~l~~~l~~~~~~~~~~~dD~~LlRFLRarkfdv~kA~~~L~~~l~wR~~  122 (316)
T 3hx3_A           44 LQKAKDELNEREETREEAVRELQEMVQAQ-AASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGRAYELLRGYVNFRLQ  122 (316)
T ss_dssp             ------------CHHHHHHHHHHHHHHHH-HTTTCHHHHHHHHHTTTCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCChHHHHHHHHHHHHHHHhC-CCccccccccccccCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHh
Confidence            45677899999999999999999999986 455311       1146799999999999999999999999999999999


Q ss_pred             cC--CCCCChhhhHHHHhcCceeeccCCCCCCCcEEEEEcCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcccEEEEEe
Q 023175          100 FR--VSELNEDSVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIID  177 (286)
Q Consensus       100 ~~--~~~l~~~~~~~~l~~~~~~~~g~~D~~Grpv~~~~~~~~~~~~~~~~~~~r~~~~~lE~~~~~~~~~~~g~~vIiD  177 (286)
                      ++  .++++++++...++.|..+.++++|++||||+++++++++++..+.+++.|++++++|.++..++.+++|+++|+|
T Consensus       123 ~~~~~~~~~~~~i~~~l~~g~~~~l~g~Dk~GrpVii~r~g~~d~~~~~~~~~~r~~~~~lE~~l~~~~~~v~g~v~IiD  202 (316)
T 3hx3_A          123 YPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIEN  202 (316)
T ss_dssp             CGGGTTTCCHHHHHHHHHTTSSEECSSCCTTSCEEEEEECTTCCTTTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEE
T ss_pred             CchhhcCCCHHHHHHHHHcCCccccCCCCCCCCEEEEEecccCCCCCCCHHHHHHHHHHHHHHHHhcccCCcceEEEEEE
Confidence            88  4677888888888888866554489999999999999999988999999999999999998765667899999999


Q ss_pred             CCCCCCCCC---CHHHHHHHHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhh
Q 023175          178 LRGFGTENA---DLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLE  253 (286)
Q Consensus       178 ~~g~s~~~~---~~~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~  253 (286)
                      ++|+|++|+   +++.++.++.++|++||+|++++||||+|++|+++|+++||||+++| +||+|++++      .+.|.
T Consensus       203 ~~g~sl~~~~~~~~~~~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~KI~~~~~~------~~~L~  276 (316)
T 3hx3_A          203 FKGFTMQQAASLRTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDD------LSGFY  276 (316)
T ss_dssp             CTTCCHHHHHHCCHHHHHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTTEEEEETC------CHHHH
T ss_pred             CCCCCHHHhccCChHHHHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhheEEeCCC------HHHHH
Confidence            999999874   78899999999999999999999999999999999999999999999 599988532      23577


Q ss_pred             hhcCccccchhcCCCccc
Q 023175          254 SRLLVKSLHSCLAALAGL  271 (286)
Q Consensus       254 ~~i~~~~LP~~~GG~~~~  271 (286)
                      +++++++||++|||+++.
T Consensus       277 ~~I~~~~LP~eyGG~~~~  294 (316)
T 3hx3_A          277 QEIDENILPSDFGGTLPK  294 (316)
T ss_dssp             HHSCGGGSBGGGTSSBCC
T ss_pred             hhCCHhhCcHhhCCCCCC
Confidence            899999999999999973

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=100.00  E-value=2.6e-47  Score=333.41  Aligned_cols=229  Identities=18%  Similarity=0.231  Sum_probs=195.0

Q ss_pred             CCChHHHHHHHHHHHHHHHhhcC-CCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcC--CCCCChhhhH
Q 023175           35 QSDPHESRKLVLQVKERLEKDYN-SLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFR--VSELNEDSVR  111 (286)
Q Consensus        35 ~~~~e~~~~~i~~lr~~l~~~~~-~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~~~wR~~~~--~~~l~~~~~~  111 (286)
                      ++|+++ +++|++||+++++... .+|    ...+|.+|+|||||++||+++|.++|+++++||++++  ..+++++++.
T Consensus         3 ~ls~~~-~~~l~~lr~~l~~~~~~~~~----~~~dd~~LlRFLra~k~dv~~A~~~l~~~l~wR~~~~~i~~~~~~~~~~   77 (262)
T 1r5l_A            3 HMSPLL-QPGLAALRRRAREAGVPLAP----LPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSII   77 (262)
T ss_dssp             -------CTTHHHHHHHHHHHTCCCSS----SCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHCHHHHSCCCGGGTH
T ss_pred             CccHHH-HHHHHHHHHHHHhCCcccCC----CCCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhChHhhhcCChHHHH
Confidence            345544 5799999999998642 233    5679999999999999999999999999999999986  2456777788


Q ss_pred             HHHhcCceeeccCCCCCCCcEEEEEcCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcccEEEEEeCCCCCCCCC---CH
Q 023175          112 GIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENA---DL  188 (286)
Q Consensus       112 ~~l~~~~~~~~g~~D~~Grpv~~~~~~~~~~~~~~~~~~~r~~~~~lE~~~~~~~~~~~g~~vIiD~~g~s~~~~---~~  188 (286)
                      ..+..|...+.+++|++||||+++++++++++.++..++.|+.++++|.++..++.+++|+++|+|++|+|++|+   ++
T Consensus        78 ~~~~~g~~~~l~g~D~~GrpV~i~~~~~~d~~~~~~~~~~r~~~~~~E~~~~~~~~~~~g~~~I~D~~g~s~~~~~~~~~  157 (262)
T 1r5l_A           78 GLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITP  157 (262)
T ss_dssp             HHHHTTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHHCCH
T ss_pred             HHHHcCCccCCCCcCCCCCEEEEEeccccCcccCCHHHHHHHHHHHHHHHHhChhhcccceEEEEECCCCCHHHHhccCH
Confidence            888888765544489999999999999999988899999999999999887665556789999999999999886   67


Q ss_pred             HHHHHHHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhhhhcCccccchhcCC
Q 023175          189 KFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLESRLLVKSLHSCLAA  267 (286)
Q Consensus       189 ~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~~~i~~~~LP~~~GG  267 (286)
                      +.++.+++++|++||+|++++||||+|++|+++|+++||||+++| +||+|+++     +..+.|.++++ ++||++|||
T Consensus       158 ~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t~~Ki~~~~~-----~~~~~L~~~i~-~~LP~~yGG  231 (262)
T 1r5l_A          158 SVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGN-----NYKQSLLQHFP-DILPLEYGG  231 (262)
T ss_dssp             HHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCS-----SCHHHHHHHST-TTSCGGGTC
T ss_pred             HHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHHHhcCHHHHhheEEeCC-----CcHHHHHHHhh-hhCcHhhCC
Confidence            999999999999999999999999999999999999999999999 59999864     23456788999 999999999


Q ss_pred             Cccchhh
Q 023175          268 LAGLIFA  274 (286)
Q Consensus       268 ~~~~~~~  274 (286)
                      +++...+
T Consensus       232 ~~~~~~~  238 (262)
T 1r5l_A          232 EEFSMED  238 (262)
T ss_dssp             SSCCHHH
T ss_pred             CCCCHHH
Confidence            9986543

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=100.00  E-value=1.4e-45  Score=330.87  Aligned_cols=226  Identities=22%  Similarity=0.298  Sum_probs=189.5

Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcCCCCCChhh-h--
Q 023175           34 CQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDS-V--  110 (286)
Q Consensus        34 ~~~~~e~~~~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~~~wR~~~~~~~l~~~~-~--  110 (286)
                      .++++ +++++|++||+||++..  ++    ...||.+|+|||||++||+++|.++|+++++||++++++++..+. .  
T Consensus        33 ~~lt~-~q~~~l~~lR~~l~~~~--~~----~~~dD~~LLRFLRArkfdv~kA~~mL~~~l~WRk~~~vd~i~~~~~~~~  105 (320)
T 3q8g_A           33 GNLTK-EQEEALLQFRSILLEKN--YK----ERLDDSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNK  105 (320)
T ss_dssp             TCCCH-HHHHHHHHHHHHHHHTT--CC----SSCSHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHHHHTH
T ss_pred             CCCCH-HHHHHHHHHHHHHHhcC--CC----CCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCcccccccccccc
Confidence            35565 45689999999998762  33    478999999999999999999999999999999999987765321 1  


Q ss_pred             ------HH-HHhcCceeeccCCCCCCCcEEEEEcCCCCCCC----CChHHHHHHHHHHHHHHHHh--------CCCCccc
Q 023175          111 ------RG-IAESGKAYVHDFLDINERPVLIVVASKHLPAV----HDPVEDEKLCVFFIEKALSK--------LPPGKEQ  171 (286)
Q Consensus       111 ------~~-~l~~~~~~~~g~~D~~Grpv~~~~~~~~~~~~----~~~~~~~r~~~~~lE~~~~~--------~~~~~~g  171 (286)
                            .. ..+.+..+++| +|++||||+++++|++++..    .+.++++|++++.+|.+++.        ....+++
T Consensus       106 ~~~~~e~~~~~~~~~~~~~g-~Dk~GRpV~i~r~g~~d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~  184 (320)
T 3q8g_A          106 EAEDKERIKLAKMYPQYYHH-VDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIET  184 (320)
T ss_dssp             HHHHHHHHHHHTTSCEEEEE-ECTTCCEEEEEECTTCCHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCC
T ss_pred             ccchhHHHHHHHhCCceecC-CCCCcCEEEEEeccccCHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcce
Confidence                  11 23345667888 89999999999999987653    37788999999999987642        1224678


Q ss_pred             EEEEEeCCCCCCCCCC--HHHHHHHHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhH
Q 023175          172 ILGIIDLRGFGTENAD--LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRC  248 (286)
Q Consensus       172 ~~vIiD~~g~s~~~~~--~~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~  248 (286)
                      +++|+|++|+|++|++  ++.++.++.++|++||+|++++||||+|++|+++|+++||||+++| +||+|+++     +.
T Consensus       185 ~~~IiD~~g~sl~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~-----~~  259 (320)
T 3q8g_A          185 SCTVLDLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGS-----SY  259 (320)
T ss_dssp             EEEEEECTTCCHHHHHHTHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCT-----TH
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCC-----Cc
Confidence            9999999999999875  6889999999999999999999999999999999999999999999 59999964     24


Q ss_pred             HHHhhhhcCccccchhcCCCccch
Q 023175          249 QTTLESRLLVKSLHSCLAALAGLI  272 (286)
Q Consensus       249 ~~~l~~~i~~~~LP~~~GG~~~~~  272 (286)
                      .+.|.+.+++++||++|||++++.
T Consensus       260 ~~~L~~~i~~~~LP~~yGG~~~~~  283 (320)
T 3q8g_A          260 KKELLKQIPIENLPVKYGGTSVLH  283 (320)
T ss_dssp             HHHHHHHSCGGGSBGGGTSCBCCS
T ss_pred             HHHHHhhCChhhCChhhCCCCCCC
Confidence            566888999999999999999874

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=100.00  E-value=1.6e-45  Score=327.69  Aligned_cols=226  Identities=21%  Similarity=0.267  Sum_probs=187.6

Q ss_pred             CCChHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcCCCCCChhh---hH
Q 023175           35 QSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNEDS---VR  111 (286)
Q Consensus        35 ~~~~e~~~~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~~~wR~~~~~~~l~~~~---~~  111 (286)
                      ++.+++++++|++||+|+++..  ++    ...||.+|+|||||++||+++|.++|+++++||++++++++..+.   ..
T Consensus        24 ~~l~~~q~~~l~~lr~~l~~~~--~~----~~~dd~~LlRFLrarkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~~~~~~   97 (296)
T 1aua_A           24 GNLDSAQEKALAELRKLLEDAG--FI----ERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEK   97 (296)
T ss_dssp             TTCCTTHHHHHHHHHHHHHHTT--CC----SSCSHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHCCCTTH
T ss_pred             CCCCHHHHHHHHHHHHHHHhcC--CC----CCCchHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCcchhhhccccCcH
Confidence            3333455789999999998752  33    567999999999999999999999999999999999876543221   11


Q ss_pred             HHHhc-CceeeccCCCCCCCcEEEEEcCCCCCC----CCChHHHHHHHHHHHHHHHHhC--------CCCcccEEEEEeC
Q 023175          112 GIAES-GKAYVHDFLDINERPVLIVVASKHLPA----VHDPVEDEKLCVFFIEKALSKL--------PPGKEQILGIIDL  178 (286)
Q Consensus       112 ~~l~~-~~~~~~g~~D~~Grpv~~~~~~~~~~~----~~~~~~~~r~~~~~lE~~~~~~--------~~~~~g~~vIiD~  178 (286)
                      ..+.. ...+++| +|++||||++++++++++.    ..+.+++++++++.+|.+++.+        ..+++|+++|+|+
T Consensus        98 ~~~~~~~~~~~~g-~Dk~GrpV~i~~~g~~d~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~s~~~g~~v~~~~~I~D~  176 (296)
T 1aua_A           98 PLIAKFYPQYYHK-TDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDL  176 (296)
T ss_dssp             HHHGGGSCCEEEE-ECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEEC
T ss_pred             HHHHHhCCceecc-cCCCCCEEEEEeeccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEEEEEEC
Confidence            22332 3346778 8999999999999998754    2578899999999999876532        2357899999999


Q ss_pred             CCCCCCCCC--HHHHHHHHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhhhh
Q 023175          179 RGFGTENAD--LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLESR  255 (286)
Q Consensus       179 ~g~s~~~~~--~~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~~~  255 (286)
                      +|+|++|++  ++.++.++.++|++||+|++++||||+|++|+++|+++||||+++| +||+|+++     +..+.|.++
T Consensus       177 ~g~s~~~~~~~~~~~k~~~~~~q~~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~-----~~~~~L~~~  251 (296)
T 1aua_A          177 KGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGS-----SYQKELLKQ  251 (296)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCS-----CCHHHHTTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhHHHhhCeEEEECchHHHHHHHHHHHhhcCHhhcceEEEeCc-----ccHHHHHhh
Confidence            999999986  6889999999999999999999999999999999999999999999 59999964     235568899


Q ss_pred             cCccccchhcCCCccch
Q 023175          256 LLVKSLHSCLAALAGLI  272 (286)
Q Consensus       256 i~~~~LP~~~GG~~~~~  272 (286)
                      +++++||++|||++...
T Consensus       252 i~~~~LP~~yGG~~~~~  268 (296)
T 1aua_A          252 IPAENLPVKFGGKSEVD  268 (296)
T ss_dssp             SCSSSSBGGGTSCBCCC
T ss_pred             CCHhhCcHHhCCCCCCC
Confidence            99999999999999654

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*

Probab=100.00  E-value=8.9e-45  Score=336.03  Aligned_cols=224  Identities=16%  Similarity=0.189  Sum_probs=191.6

Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcCCCCCCh----hh
Q 023175           34 CQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELNE----DS  109 (286)
Q Consensus        34 ~~~~~e~~~~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~~~wR~~~~~~~l~~----~~  109 (286)
                      +++.+++++++|++||+++++..+++|     ..||.+|+|||||++||+++|.++|+++++||++++++++..    +.
T Consensus         5 ~~~l~~~q~~~l~~lr~~l~~~~~~l~-----~~dD~~LlRFLrarkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~~~~~   79 (403)
T 1olm_A            5 VGDLSPRQKEALAKFRENVQDVLPALP-----NPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEV   79 (403)
T ss_dssp             TTBCCHHHHHHHHHHHHHHGGGGGGSS-----CCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTGGGGGGSCCCHH
T ss_pred             ccCCCHHHHHHHHHHHHHHHhhccCCC-----CCChhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCcccccCCHHH
Confidence            344556667899999999998654554     578999999999999999999999999999999998766532    23


Q ss_pred             hHHHHhcCceeeccCCCCCCCcEEEEEcCCCCCC----CCChHHHHHHHHHHHHHHHHhCCC-------CcccEEEEEeC
Q 023175          110 VRGIAESGKAYVHDFLDINERPVLIVVASKHLPA----VHDPVEDEKLCVFFIEKALSKLPP-------GKEQILGIIDL  178 (286)
Q Consensus       110 ~~~~l~~~~~~~~g~~D~~Grpv~~~~~~~~~~~----~~~~~~~~r~~~~~lE~~~~~~~~-------~~~g~~vIiD~  178 (286)
                      +...+   ..+++| +|++||||+++++++++++    ..+.++++|++++++|.+++.++.       +++|+++|+|+
T Consensus        80 ~~~~~---~~~~~g-~Dk~GrpV~~~~~g~~d~~~l~~~~~~~~~~r~~~~~~E~~~~~~~~~s~~~g~~v~~~~~I~D~  155 (403)
T 1olm_A           80 IQQYL---SGGMCG-YDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDC  155 (403)
T ss_dssp             HHHHC---CBEEEE-ECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEEC
T ss_pred             HHHhC---Cceeec-cCCCcCEEEEEecCCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhhHHhhCCcccceEEEEEC
Confidence            33333   234578 7999999999999998875    478999999999999999876542       47899999999


Q ss_pred             CCCCCCCCC---HHHHHHHHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhhh
Q 023175          179 RGFGTENAD---LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLES  254 (286)
Q Consensus       179 ~g~s~~~~~---~~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~~  254 (286)
                      +|++++|++   ++.++.+++++|++||+|++++||||+|++|+++|+++||||+++| +||+|+++     ++.+.|.+
T Consensus       156 ~g~sl~~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~-----~~~~~L~~  230 (403)
T 1olm_A          156 EGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA-----NWKEVLLK  230 (403)
T ss_dssp             TTCCGGGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCT-----THHHHHTT
T ss_pred             CCCCHHHHhhHHHHHHHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEECh-----hHHHHHHh
Confidence            999999984   5789999999999999999999999999999999999999999999 59999863     44567889


Q ss_pred             hcCccccchhcCCCccc
Q 023175          255 RLLVKSLHSCLAALAGL  271 (286)
Q Consensus       255 ~i~~~~LP~~~GG~~~~  271 (286)
                      ++++++||++|||++..
T Consensus       231 ~I~~~~LP~~yGG~~~~  247 (403)
T 1olm_A          231 HISPDQVPVEYGGTMTD  247 (403)
T ss_dssp             TSCGGGSBGGGTSSBCC
T ss_pred             hcChhhCchhhCCCcCC
Confidence            99999999999999865

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*

Probab=99.16  E-value=6.2e-11  Score=102.29  Aligned_cols=121  Identities=12%  Similarity=0.036  Sum_probs=92.5

Q ss_pred             hcCceeeccCCCCCCCcEEEEEcCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcccEEEEEeCCCCCCCCC-CHHHHHH
Q 023175          115 ESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTENA-DLKFLTF  193 (286)
Q Consensus       115 ~~~~~~~~g~~D~~Grpv~~~~~~~~~~~~~~~~~~~r~~~~~lE~~~~~~~~~~~g~~vIiD~~g~s~~~~-~~~~~k~  193 (286)
                      +.+.++..| .|++||||+++..++......+.+.++.+++..++    .+  -...+.+|+|+.|++..+. +.+.++.
T Consensus         9 ~~~ify~~G-~d~dGrpViv~~~~~l~~~~~D~e~Ll~~vl~tl~----~~--~~~~y~lV~d~T~~~~~n~p~~~wl~~   81 (256)
T 3pg7_A            9 TLSIFYQAG-TSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLK----PY--YAKPYEIVVDLTHTGPSNRFKTDFLSK   81 (256)
T ss_dssp             HHTSEEEEE-ECTTSCEEEEEEGGGCCBTTBCHHHHHHHHHHHHT----TT--TTSCEEEEEECTTCCGGGCCCHHHHHH
T ss_pred             HcCCEEEcC-cCCCCCEEEEEEeecCCCCCCCHHHHHHHHHHHHH----Hh--cCCCeEEEEECCCCCcccCCcHHHHHH
Confidence            445666667 89999999999999887655555444444443333    22  2457999999999998765 5789999


Q ss_pred             HHHHHhhhcccccccEEEEeCCcchHHHHHHh-hhcccccc-cceeeccCC
Q 023175          194 LFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLT-KPLLKSYA-SLKPSGRNI  242 (286)
Q Consensus       194 ~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lv-kpfL~~~t-~ki~~~~~~  242 (286)
                      +.+++-..|...++++||+|++++|+..|+.+ ++|.+.+. +|++++++-
T Consensus        82 ~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv~sl  132 (256)
T 3pg7_A           82 WFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCP  132 (256)
T ss_dssp             TTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEESST
T ss_pred             HHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEECCH
Confidence            99999999999999999999999999777665 55555565 599998653

>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4

Probab=88.02  E-value=1.1  Score=28.79  Aligned_cols=38  Identities=11%  Similarity=0.206  Sum_probs=30.9

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHH
Q 023175           43 KLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTK   92 (286)
Q Consensus        43 ~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~   92 (286)
                      +.+++|++.+    |        ..+...+..-|+++++|++.|.+.|-+
T Consensus        11 e~l~~L~emF----P--------~ld~~~I~~vL~a~~gdvd~aI~~LL~   48 (59)
T 1wgl_A           11 EDLKAIQDMF----P--------NMDQEVIRSVLEAQRGNKDAAINSLLQ   48 (59)
T ss_dssp             HHHHHHHHHC----S--------SSCHHHHHHHHTTTTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHC----C--------CCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence            4666777654    2        458899999999999999999999865

>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=86.61  E-value=2.1  Score=28.27  Aligned_cols=39  Identities=15%  Similarity=0.221  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHH
Q 023175           43 KLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKA   93 (286)
Q Consensus        43 ~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~   93 (286)
                      +++++|++.+    |        ..+...+..-|+++++|++.|.+.|-+.
T Consensus        20 ~~v~~L~~MF----P--------~lD~~vI~~vL~a~~G~vd~aId~LL~m   58 (67)
T 2dhy_A           20 QAMDDFKTMF----P--------NMDYDIIECVLRANSGAVDATIDQLLQM   58 (67)
T ss_dssp             HHHHHHHHHC----S--------SSCHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHC----C--------CCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            4677777755    2        4578999999999999999999998764

>2di0_A Activating signal cointegrator 1 complex subunit 2; ASCC2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.4

Probab=83.39  E-value=3.5  Score=27.47  Aligned_cols=45  Identities=24%  Similarity=0.225  Sum_probs=36.7

Q ss_pred             CChHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHH
Q 023175           36 SDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTK   92 (286)
Q Consensus        36 ~~~e~~~~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~   92 (286)
                      .+..+.+..|.++++.+    |        .+.+.++.+.|..++.|+|.+...|-+
T Consensus         8 ~~~~~l~s~I~qV~DLf----P--------dLG~gfi~~~L~~y~~nvE~vin~LLE   52 (71)
T 2di0_A            8 MCGVELDSLISQVKDLL----P--------DLGEGFILACLEYYHYDPEQVINNILE   52 (71)
T ss_dssp             CSSHHHHHHHHHHHHHC----C--------SSCHHHHHHHHHHTTTCHHHHHHHHHT
T ss_pred             CcHHHHHHHHHHHHHHc----c--------cCCHHHHHHHHHHhCCCHHHHHHHHHc
Confidence            35567778888888866    2        457999999999999999999988865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	286
d1r5la2	185	c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot	5e-17
d1auaa1	93	a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl	2e-10
d1olma1	75	a.5.3.1 (A:1-75) Supernatant protein factor (SPF),	1e-08
d1olma3	199	c.13.1.1 (A:76-274) Supernatant protein factor (SP	1e-06
d1r5la1	66	a.5.3.1 (A:25-90) Alpha-tocopherol transfer protei	2e-04

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 5e-17
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 3/126 (2%)

Query: 109 SVRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPG 168
           S+ G+ ++G   V    D     VLI   +   P V    +  ++ +   E  + ++   
Sbjct: 1   SIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQ 60

Query: 169 KEQILGIIDLRGFGTENAD---LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLT 225
           +  I  I DL G+   +A          +  V     P ++  +  +  P +F   + + 
Sbjct: 61  RNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMI 120

Query: 226 KPLLKS 231
           KP L  
Sbjct: 121 KPFLTE 126

>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: N-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.0 bits (130), Expect = 2e-10
 Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 40  ESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQE 99
              K + ++++ LE        G   R D+  +L FL+ RKF ++ +        KWR++
Sbjct: 29  AQEKALAELRKLLEDA------GFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKD 82

Query: 100 FRVSELNED 108
           +    + +D
Sbjct: 83  YGTDTILQD 91

>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Supernatant protein factor (SPF), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (116), Expect = 1e-08
 Identities = 15/71 (21%), Positives = 35/71 (49%), Gaps = 6/71 (8%)

Query: 37  DPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKW 96
            P +   L  + +E ++    +LP       D+  +L +L+ R F +++S A L K +++
Sbjct: 9   SPRQKEALA-KFRENVQDVLPALP-----NPDDYFLLRWLRARSFDLQKSEAMLRKHVEF 62

Query: 97  RQEFRVSELNE 107
           R++  +  +  
Sbjct: 63  RKQKDIDNIIS 73

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 126 DINERPVLIVVAS----KHLPAVHDPVEDEKLCVFFIEKAL-------SKLPPGKEQILG 174
           D++  PV   +      K L       +  +  +   E  L       +KL    E I  
Sbjct: 17  DLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITI 76

Query: 175 IIDLRGFGTENAD---LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLK 230
           I D  G G ++     ++       +F   +P+ L  +  V+AP +F   + L KP L 
Sbjct: 77  IYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLS 135

>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 66

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 2e-04
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 47  QVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEF 100
            ++ R  +    +P+      D   +L FL+ R F ++ +   L    KWR E 
Sbjct: 6   ALRRRAREA--GVPLAPLPLTDS-FLLRFLRARDFDLDLAWRLLKNYYKWRAEC 56

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	286
d1r5la2	185	Alpha-tocopherol transfer protein {Human (Homo sap	100.0
d1olma3	199	Supernatant protein factor (SPF), middle domain {H	99.97
d1auaa2	203	C-terminal domain of phosphatidylinositol transfer	99.96
d1olma1	75	Supernatant protein factor (SPF), N-terminal domai	99.57
d1auaa1	93	N-terminal domain of phosphatidylinositol transfer	99.49
d1r5la1	66	Alpha-tocopherol transfer protein {Human (Homo sap	99.47
d1mn3a_	54	Vacuolar protein sorting-associated protein vps9 {	89.43
d1veja1	61	4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]	87.98
d1wgla_	59	Toll-interacting protein {Human (Homo sapiens) [Ta	87.6
d2bwba1	44	DSK2 {Baker's yeast (Saccharomyces cerevisiae) [Ta	85.74
d2daha1	41	Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}	82.77

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-33  Score=232.17  Aligned_cols=159  Identities=15%  Similarity=0.147  Sum_probs=140.3

Q ss_pred             hHHHHhcCceeeccCCCCCCCcEEEEEcCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcccEEEEEeCCCCCCCC---C
Q 023175          110 VRGIAESGKAYVHDFLDINERPVLIVVASKHLPAVHDPVEDEKLCVFFIEKALSKLPPGKEQILGIIDLRGFGTEN---A  186 (286)
Q Consensus       110 ~~~~l~~~~~~~~g~~D~~Grpv~~~~~~~~~~~~~~~~~~~r~~~~~lE~~~~~~~~~~~g~~vIiD~~g~s~~~---~  186 (286)
                      +...+++|...+++++|++||||+++++++++++.++..++.|+.++.+|.++++.+.+.+|+++|+|++|++++|   .
T Consensus         2 i~~~l~~g~~~~lp~rD~~Gr~v~~~r~~~~d~~~~~~~~~~r~~~~~~e~~~~~~~~~~~g~~~I~D~~g~s~~~~~~~   81 (185)
T d1r5la2           2 IIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQI   81 (185)
T ss_dssp             THHHHHTTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHHC
T ss_pred             hHHHHHcCCceecCCCCcCcCEEEEEEcccCCCCCCCHHHHHHHHHHHHHHHHhccccCCceEEEEEECCCCCHHHhhhc
Confidence            4567889998887669999999999999999999999999999999999988776666789999999999999887   5


Q ss_pred             CHHHHHHHHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhhhhcCccccchhc
Q 023175          187 DLKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLESRLLVKSLHSCL  265 (286)
Q Consensus       187 ~~~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~~~i~~~~LP~~~  265 (286)
                      +++.++.+++++|++||+|++++||||+|++|+++|+++||||+++| +||+++++..  .    .+...+++++||++|
T Consensus        82 ~~~~~~~~~~~~q~~yP~rl~~i~ivn~P~~~~~~~~~vk~fl~~k~~~Ki~~~~~~~--~----~~~~~~~~~~LP~~~  155 (185)
T d1r5la2          82 TPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNY--K----QSLLQHFPDILPLEY  155 (185)
T ss_dssp             CHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSSC--H----HHHHHHSTTTSCGGG
T ss_pred             cHHHHHHHHHHHHhhCchhhheeEEEcCCHHHHHHHHHHHHhccHHHHhheEEeccch--H----HHHhhcCHHhCCHhc
Confidence            78999999999999999999999999999999999999999999999 5999986531  1    233456789999999


Q ss_pred             CCCccchhh
Q 023175          266 AALAGLIFA  274 (286)
Q Consensus       266 GG~~~~~~~  274 (286)
                      ||++++..+
T Consensus       156 GG~~~~~~~  164 (185)
T d1r5la2         156 GGEEFSMED  164 (185)
T ss_dssp             TCSSCCHHH
T ss_pred             CCCCCChHH
Confidence            999986543

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=221.61  Aligned_cols=148  Identities=16%  Similarity=0.083  Sum_probs=130.3

Q ss_pred             eeeccCCCCCCCcEEEEEcCCCCCC----CCChHHHHHHHHHHHHHHHHhC-------CCCcccEEEEEeCCCCCCCCCC
Q 023175          119 AYVHDFLDINERPVLIVVASKHLPA----VHDPVEDEKLCVFFIEKALSKL-------PPGKEQILGIIDLRGFGTENAD  187 (286)
Q Consensus       119 ~~~~g~~D~~Grpv~~~~~~~~~~~----~~~~~~~~r~~~~~lE~~~~~~-------~~~~~g~~vIiD~~g~s~~~~~  187 (286)
                      ..++| +|++||||+++++|+++++    ..+.+++.|+.++.+|.+++.+       ..+++|+++|+|++|+|++|++
T Consensus        11 ~~~~G-~Dk~Grpv~~~r~g~~d~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~v~~~~~I~Dl~g~s~~~~~   89 (199)
T d1olma3          11 GGMCG-YDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLW   89 (199)
T ss_dssp             BEEEE-ECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGC
T ss_pred             Ccccc-CCCCCCEEEEEecccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccceEEEEEECCCCchhhhc
Confidence            34788 7999999999999998764    4578899999999999987643       3456899999999999999985


Q ss_pred             ---HHHHHHHHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhhhhcCccccch
Q 023175          188 ---LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLESRLLVKSLHS  263 (286)
Q Consensus       188 ---~~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~~~i~~~~LP~  263 (286)
                         +++++.+++++|++||+|++++||||+|++|+++|+++||||+++| +||+|+++     +..+.|.+++++++||+
T Consensus        90 ~~~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~-----~~~~~L~~~i~~~~lP~  164 (199)
T d1olma3          90 KPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA-----NWKEVLLKHISPDQVPV  164 (199)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCT-----THHHHHTTTSCGGGSBG
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCC-----CCHHHHHHhCCHhhCCH
Confidence               6889999999999999999999999999999999999999999999 59999863     33566889999999999


Q ss_pred             hcCCCccch
Q 023175          264 CLAALAGLI  272 (286)
Q Consensus       264 ~~GG~~~~~  272 (286)
                      +|||++...
T Consensus       165 ~yGGt~~~~  173 (199)
T d1olma3         165 EYGGTMTDP  173 (199)
T ss_dssp             GGTSSBCCT
T ss_pred             HhCCCCCCC
Confidence            999998653

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.7e-30  Score=215.34  Aligned_cols=150  Identities=21%  Similarity=0.216  Sum_probs=130.2

Q ss_pred             CceeeccCCCCCCCcEEEEEcCCCCCC----CCChHHHHHHHHHHHHHHHHh--------CCCCcccEEEEEeCCCCCCC
Q 023175          117 GKAYVHDFLDINERPVLIVVASKHLPA----VHDPVEDEKLCVFFIEKALSK--------LPPGKEQILGIIDLRGFGTE  184 (286)
Q Consensus       117 ~~~~~~g~~D~~Grpv~~~~~~~~~~~----~~~~~~~~r~~~~~lE~~~~~--------~~~~~~g~~vIiD~~g~s~~  184 (286)
                      ...+++| +|++||||+++++|+.++.    ..+.+++.++.++.+|.+++.        ....++++++|+|++|++++
T Consensus        11 ~p~~~~G-~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g~s~~   89 (203)
T d1auaa2          11 YPQYYHK-TDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISIS   89 (203)
T ss_dssp             SCCEEEE-ECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCHH
T ss_pred             CCCcCCC-CCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceEEEEEECCCCChH
Confidence            3557888 8999999999999987653    458889999999999988652        13457899999999999999


Q ss_pred             CCC--HHHHHHHHHHHhhhcccccccEEEEeCCcchHHHHHHhhhcccccc-cceeeccCCcchhhHHHHhhhhcCcccc
Q 023175          185 NAD--LKFLTFLFDVFYYYHPKRLGEVLFVEAPFVFKPFWQLTKPLLKSYA-SLKPSGRNISLKQRCQTTLESRLLVKSL  261 (286)
Q Consensus       185 ~~~--~~~~k~~~~~lq~~yP~rl~~i~iiN~P~~f~~~w~lvkpfL~~~t-~ki~~~~~~~~~~~~~~~l~~~i~~~~L  261 (286)
                      +++  ...++.+++++|++||+|++++||||+|++|+++|+++|+||+++| +||+++++.     ..+.|.+++++++|
T Consensus        90 ~~~~~~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~~-----~~~~L~~~id~~~L  164 (203)
T d1auaa2          90 SAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSS-----YQKELLKQIPAENL  164 (203)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSC-----CHHHHTTTSCSSSS
T ss_pred             HhhhHHHHHHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecCCC-----CHHHHHhhCCHhhC
Confidence            885  4778999999999999999999999999999999999999999999 599998643     24568889999999


Q ss_pred             chhcCCCccch
Q 023175          262 HSCLAALAGLI  272 (286)
Q Consensus       262 P~~~GG~~~~~  272 (286)
                      |++|||++.+.
T Consensus       165 P~~~GG~~~~~  175 (203)
T d1auaa2         165 PVKFGGKSEVD  175 (203)
T ss_dssp             BGGGTSCBCCC
T ss_pred             hHHhCCCCcCC
Confidence            99999998753

>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Supernatant protein factor (SPF), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.6e-15  Score=103.65  Aligned_cols=68  Identities=16%  Similarity=0.325  Sum_probs=56.6

Q ss_pred             CCCChHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcCCCCCC
Q 023175           34 CQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELN  106 (286)
Q Consensus        34 ~~~~~e~~~~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~~~wR~~~~~~~l~  106 (286)
                      +++.+++++++|++||+++......     .+..||.+|+|||||++||+++|.++++++++||+++++|+|.
T Consensus         5 ~gelt~~q~~~l~elr~~l~~~~~~-----~~~~dd~~LlRFLrAr~fdv~kA~~ml~~~l~WR~~~~vD~Il   72 (75)
T d1olma1           5 VGDLSPRQKEALAKFRENVQDVLPA-----LPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNII   72 (75)
T ss_dssp             TTBCCHHHHHHHHHHHHHHGGGGGG-----SSCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTGGGGG
T ss_pred             cccCCHHHHHHHHHHHHHHHhhccc-----CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHcCchhhh
Confidence            4454556678999999999865322     1457899999999999999999999999999999999998763

>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: N-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.49  E-value=3.9e-14  Score=101.25  Aligned_cols=67  Identities=22%  Similarity=0.446  Sum_probs=55.8

Q ss_pred             CCCCChHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcCCCCCC
Q 023175           33 NCQSDPHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFRVSELN  106 (286)
Q Consensus        33 e~~~~~e~~~~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~~~wR~~~~~~~l~  106 (286)
                      ..++++++ ++++.+||+++.+.  .++    ...||.+|+|||||++||+++|.++|.++++||+++++++|.
T Consensus        23 ~g~Lt~~q-~~~L~elr~~l~~~--~~~----~~~DD~~llRfLrAr~fd~~~a~~ml~~~l~wR~~~~~d~i~   89 (93)
T d1auaa1          23 PGNLDSAQ-EKALAELRKLLEDA--GFI----ERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTIL   89 (93)
T ss_dssp             TTTCCTTH-HHHHHHHHHHHHHT--TCC----SSCSHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHH
T ss_pred             CCcCCHHH-HHHHHHHHHHHHHC--CCC----CCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCcchhh
Confidence            34456544 57999999999875  233    567999999999999999999999999999999999987653

>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.8e-14  Score=95.35  Aligned_cols=55  Identities=22%  Similarity=0.350  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHhhc-CCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcC
Q 023175           43 KLVLQVKERLEKDY-NSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKAIKWRQEFR  101 (286)
Q Consensus        43 ~~i~~lr~~l~~~~-~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~~~wR~~~~  101 (286)
                      ++|+|||++|++.. +++|    ...||.+|+|||||++||+++|.++|++|++||++++
T Consensus         2 ~aL~elR~~l~~~~~p~lp----~~~dD~~LlrFLRarkf~~~ka~~~l~~y~~~R~~~p   57 (66)
T d1r5la1           2 PGLAALRRRAREAGVPLAP----LPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECP   57 (66)
T ss_dssp             TTHHHHHHHHHHHTCCCSS----SCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHcCCCcCC----CCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHCH
Confidence            47899999998764 4555    5679999999999999999999999999999999876

>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: CUE domain
domain: Vacuolar protein sorting-associated protein vps9
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.43  E-value=0.53  Score=28.20  Aligned_cols=44  Identities=16%  Similarity=0.130  Sum_probs=34.3

Q ss_pred             hHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHHH
Q 023175           38 PHESRKLVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTKA   93 (286)
Q Consensus        38 ~e~~~~~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~~   93 (286)
                      +++.++.++.|++.+            +..|...+---|++++|+++.|+..+-..
T Consensus         9 ~~e~~e~~~~Lk~MF------------P~~D~~VI~~VL~a~~G~vd~aidaLL~M   52 (54)
T d1mn3a_           9 ENERKDTLNTLQNMF------------PDMDPSLIEDVCIAKKSRIEPCVDALLSL   52 (54)
T ss_dssp             HHHHHHHHHHHHHHC------------TTSCHHHHHHHHSCSSCSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHC------------CCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence            456666777777654            24688999999999999999999988653

>d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: 4931431F19Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.98  E-value=0.64  Score=28.56  Aligned_cols=26  Identities=19%  Similarity=0.086  Sum_probs=23.0

Q ss_pred             CCCHHHHHHHHhhcCCCHHHHHHHHH
Q 023175           66 RDDEDMILWFLKDRKFSIEESLAKLT   91 (286)
Q Consensus        66 ~~~d~~LlRFLra~~~dv~~A~~~l~   91 (286)
                      ..|+..-++-|++.++|++.|++.|-
T Consensus        34 F~d~~~Nl~AL~~t~Gdv~~Aie~Ll   59 (61)
T d1veja1          34 FANRDANLQALVATDGDIHAAIEMLL   59 (61)
T ss_dssp             CCCHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCHHHHHHHHh
Confidence            55788889999999999999999874

>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: CUE domain
domain: Toll-interacting protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.60  E-value=0.61  Score=28.45  Aligned_cols=37  Identities=11%  Similarity=0.195  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHhhcCCCHHHHHHHHHH
Q 023175           44 LVLQVKERLEKDYNSLPVGKNGRDDEDMILWFLKDRKFSIEESLAKLTK   92 (286)
Q Consensus        44 ~i~~lr~~l~~~~~~lp~~~~~~~~d~~LlRFLra~~~dv~~A~~~l~~   92 (286)
                      .+++|++.+            +..|+..+..-|+++++|++.|+..|-.
T Consensus        12 ~i~~LkeMF------------P~~D~~vI~~VL~a~~G~vd~aid~LL~   48 (59)
T d1wgla_          12 DLKAIQDMF------------PNMDQEVIRSVLEAQRGNKDAAINSLLQ   48 (59)
T ss_dssp             HHHHHHHHC------------SSSCHHHHHHHHTTTTTCHHHHHHHHHH
T ss_pred             HHHHHHHHC------------CCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence            467777655            2468899999999999999999998865

>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: DSK2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.74  E-value=1.3  Score=25.25  Aligned_cols=27  Identities=26%  Similarity=0.119  Sum_probs=23.9

Q ss_pred             CCCCHHHHHHHHhhcCCCHHHHHHHHH
Q 023175           65 GRDDEDMILWFLKDRKFSIEESLAKLT   91 (286)
Q Consensus        65 ~~~~d~~LlRFLra~~~dv~~A~~~l~   91 (286)
                      ...|+..-++-|+++++|++.|++.|-
T Consensus        16 GF~d~~~Ni~AL~~t~GdV~~Aie~Ll   42 (44)
T d2bwba1          16 GFFDFDRNVAALRRSGGSVQGALDSLL   42 (44)
T ss_dssp             TCCCHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHcCCCHHHHHHHHh
Confidence            466888999999999999999999874

>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquilin-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.77  E-value=1.1  Score=25.15  Aligned_cols=28  Identities=18%  Similarity=0.157  Sum_probs=24.9

Q ss_pred             CCCCHHHHHHHHhhcCCCHHHHHHHHHH
Q 023175           65 GRDDEDMILWFLKDRKFSIEESLAKLTK   92 (286)
Q Consensus        65 ~~~~d~~LlRFLra~~~dv~~A~~~l~~   92 (286)
                      ...|+..-++-|.+.++|+++|++.|.+
T Consensus        13 GF~d~~~Ni~AL~~t~Gdv~~Aie~Ll~   40 (41)
T d2daha1          13 GFLNREANLQALIATGGDVDAAVEKLRQ   40 (41)
T ss_dssp             TCCCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence            3568889999999999999999999875