Citrus Sinensis ID: 023197

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
Protein Sequence
MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEFQ
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHcccccccccccEEEcccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccEEEEEEEccEEcccccccccccccEEEEcccccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHccccccEEEEEcccccccccccccccHcccccEEEccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEEccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccc
Coil and Loop (DISEMBL)
meaqastelppgfrfhptdEELIVHYLRnqatsrpcpvsiipevdiykfdpwqlpekaefgekewyffsprdrkypngtrpnratvsgywkatgtdkaiyggskyLGVKKALVFykgrppkgiktdwimheyrlndptrqpykhngsmkldDWVLCRIykkrqtgsrsvldakveeDQSCVDqlgktggyvehanasdeqklmvkfprtcslAHLVELeyfapisqllndntynfnydfqnginnnaasddqfenklqpsdmhqvnhsdslnqqslfvnptvyefq
Flexible Loop (DISEMBL)
meaqastelppgfrfhPTDEELIVHYLrnqatsrpcpvSIIPEVDIYKFDPWQLPEKAefgekewyffsprdrkypngtrpnratvsgywkatgtdkaiyggskYLGVKKALVFYKgrppkgiktdwiMHEYRLndptrqpykhngsmklddWVLCRIYKKrqtgsrsvldakveEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHsdslnqqslfvnptvyefq
Low Complexity Region (SEG)
MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEFQ
Disordered region (IsUnstruct)
**************FHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDR*Y******NRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQ****************CVDQLGKTGGYVEHAN***EQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGI*******************************************
Disordered Region (DISOPRED)
******T***PGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLND***************DWVLCRIYK***********************************************************************************************************************PTVY***
Disordered Region (DISEMBL)
********LPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEFQ
Disordered Region (DISPRO)
*******ELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQP***NGSMKLDDWVLCRIYKKRQ*********************************************TCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSD*************SLFVNPTVY*F*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEFQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	286	2.2.26 [Sep-21-2011]
O49255	268	NAC transcription factor	yes	no	0.856	0.914	0.623	1e-89
A2YMR0	425	NAC transcription factor	N/A	no	0.576	0.388	0.641	6e-66
A0SPJ6	396	NAC transcription factor	N/A	no	0.629	0.454	0.616	2e-65
Q8H4S4	425	NAC transcription factor	no	no	0.576	0.388	0.641	2e-65
A0SPJ9	402	NAC transcription factor	N/A	no	0.629	0.447	0.611	3e-65
D2SMN4	406	NAC transcription factor	N/A	no	0.622	0.438	0.598	5e-65
Q8GY42	323	NAC transcription factor	no	no	0.590	0.523	0.657	2e-64
A0SPJ3	405	NAC transcription factor	N/A	no	0.548	0.387	0.647	4e-64
A0SPJ8	406	NAC transcription factor	N/A	no	0.611	0.431	0.603	4e-64
A0SPJ4	405	NAC transcription factor	N/A	no	0.548	0.387	0.642	1e-63

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  329 bits (844), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 162/260 (62%), Positives = 194/260 (74%), Gaps = 15/260 (5%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
           ME  + + LPPGFRFHPTDEELIV+YLRNQ  S+PCPVSIIPEVDIYKFDPWQLPEK EF
Sbjct: 1   MEVTSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEF 60

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           GE EWYFFSPR+RKYPNG RPNRA VSGYWKATGTDKAI+ GS  +GVKKALVFYKGRPP
Sbjct: 61  GENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPP 120

Query: 121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSC 180
           KGIKTDWIMHEYRL+D  +   K NGSM+LD+WVLCRIYKKR  G+  +L+    E +  
Sbjct: 121 KGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKR--GASKLLN----EQEGF 174

Query: 181 VDQL---GKTGGYVEHANASDEQKLM----VKFPRTCSLAHLVELEYFAPISQLLNDNTY 233
           +D++    +T   V  A    E+++M    +K PRTCSLAHL+E++Y  P+S +  DN  
Sbjct: 175 MDEVLMEDETKVVVNEAERRTEEEIMMMTSMKLPRTCSLAHLLEMDYMGPVSHI--DNFS 232

Query: 234 NFNYDFQNGINNNAASDDQF 253
            F++  Q    ++   D QF
Sbjct: 233 QFDHLHQPDSESSWFGDLQF 252

May function in the transition between active cell division and cell expansion.
Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  251 bits (640), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 120/187 (64%), Positives = 139/187 (74%), Gaps = 22/187 (11%)

Query: 5   ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKE 64
           ++ ELPPGFRFHPTDEEL+VHYL+ +A S P PV+II EVD+YKFDPW+LPEKA FGE+E
Sbjct: 25  SAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFGEQE 84

Query: 65  WYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGS---KYLGVKKALVFYKGRPPK 121
           WYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I       + +GVKKALVFY+G+PPK
Sbjct: 85  WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPK 144

Query: 122 GIKTDWIMHEYRLND---------PTRQP-------YKHNGSMKLDDWVLCRIYKKRQ-- 163
           G+KT+WIMHEYRL D          TRQP        +   S++LDDWVLCRIYKK    
Sbjct: 145 GVKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRIYKKTNKA 204

Query: 164 -TGSRSV 169
             G RS+
Sbjct: 205 GAGQRSM 211

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  249 bits (635), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 119/193 (61%), Positives = 141/193 (73%), Gaps = 13/193 (6%)

Query: 5   ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKE 64
           ++ ELPPGFRFHPTDEEL+VHYL+ +A   P PV+II EVD+YKFDPW+LPEKA FGE+E
Sbjct: 24  SAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQE 83

Query: 65  WYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG---GSKYLGVKKALVFYKGRPPK 121
           WYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I     G + +GVKKALVFY+G+PPK
Sbjct: 84  WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPK 143

Query: 122 GIKTDWIMHEYRLNDP------TRQPYKHNG----SMKLDDWVLCRIYKKRQTGSRSVLD 171
           G+KT+WIMHEYRL D       +R P    G    S++LDDWVLCRIYKK    +     
Sbjct: 144 GLKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKKINKAAAGDQQ 203

Query: 172 AKVEEDQSCVDQL 184
             +E + S  D +
Sbjct: 204 RSMECEDSVEDAV 216

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  248 bits (634), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 120/187 (64%), Positives = 138/187 (73%), Gaps = 22/187 (11%)

Query: 5   ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKE 64
           ++ ELPPGFRFHPTDEEL+VHYL+ +A S P PV+II EVD+YKFDPW LPEKA FGE+E
Sbjct: 25  SAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANFGEQE 84

Query: 65  WYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGS---KYLGVKKALVFYKGRPPK 121
           WYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I       + +GVKKALVFY+G+PPK
Sbjct: 85  WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPK 144

Query: 122 GIKTDWIMHEYRLND---------PTRQP-------YKHNGSMKLDDWVLCRIYKKRQ-- 163
           G+KT+WIMHEYRL D          TR+P        K   S++LDDWVLCRIYKK    
Sbjct: 145 GVKTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRIYKKTNKA 204

Query: 164 -TGSRSV 169
             G RS+
Sbjct: 205 GAGQRSM 211

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  248 bits (633), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 118/193 (61%), Positives = 141/193 (73%), Gaps = 13/193 (6%)

Query: 5   ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKE 64
           ++ ELPPGFRFHPTDEEL+VHYL+ +A   P PV+II EVD+YKFDPW+LPEKA FGE+E
Sbjct: 24  SAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQE 83

Query: 65  WYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG---GSKYLGVKKALVFYKGRPPK 121
           WYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I     G + +GVK ALVFY+G+PPK
Sbjct: 84  WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKXALVFYRGKPPK 143

Query: 122 GIKTDWIMHEYRLNDP------TRQPYKHNG----SMKLDDWVLCRIYKKRQTGSRSVLD 171
           G+KT+WIMHEYRL D       +R P    G    S++LDDWVLCRIYKK    + +   
Sbjct: 144 GLKTNWIMHEYRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRIYKKINKAAAADQQ 203

Query: 172 AKVEEDQSCVDQL 184
             +E + S  D +
Sbjct: 204 RSMECEDSVEDAV 216

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score =  248 bits (632), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 118/197 (59%), Positives = 140/197 (71%), Gaps = 19/197 (9%)

Query: 5   ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKE 64
           ++ ELPPGFRFHPTDEEL+VHYL+ +A   P PV+II EVD+YKFDPW+LPEKA FGE E
Sbjct: 31  SAPELPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHE 90

Query: 65  WYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-----GSKYLGVKKALVFYKGRP 119
           WYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I       G + +GVKKALVFY+G+P
Sbjct: 91  WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKP 150

Query: 120 PKGIKTDWIMHEYRLNDP-------TRQPYKHNG-----SMKLDDWVLCRIYKKRQTGSR 167
           P+G+KT+WIMHEYRL          +R P    G     S++LDDWVLCRIYKK    + 
Sbjct: 151 PRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAA 210

Query: 168 SVLDAKVEEDQSCVDQL 184
           +V D   +    C D +
Sbjct: 211 AVGDE--QRSMECEDSV 225

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  246 bits (627), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 117/178 (65%), Positives = 132/178 (74%), Gaps = 9/178 (5%)

Query: 9   LPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFF 68
           LPPGFRFHPTDEEL+VHYL+ +A S P PVSII E+D+YKFDPW+LP KA FGE EWYFF
Sbjct: 16  LPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFF 75

Query: 69  SPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKYLGVKKALVFYKGRPPKGIKTDW 127
           SPRDRKYPNG RPNRA  SGYWKATGTDK I+   S  +GVKKALVFY G+PPKGIKTDW
Sbjct: 76  SPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIKTDW 135

Query: 128 IMHEYRLND--------PTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEED 177
           IMHEYRL D        P         S++LDDWVLCRIYKK  +   ++    + ED
Sbjct: 136 IMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSSQRPTMERVLLRED 193

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score =  244 bits (624), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 114/176 (64%), Positives = 131/176 (74%), Gaps = 19/176 (10%)

Query: 5   ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKE 64
           ++ ELPPGFRFHPTDEEL+VHYL+ +A   P PV+II EVD+YKFDPW+LPEKA FGE+E
Sbjct: 29  SAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQE 88

Query: 65  WYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGS-------KYLGVKKALVFYKG 117
           WYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I           + LGVKKALVFY+G
Sbjct: 89  WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRG 148

Query: 118 RPPKGIKTDWIMHEYRLND------------PTRQPYKHNGSMKLDDWVLCRIYKK 161
           +PPKG+KT+WIMHEYRL D            P     +   S++LDDWVLCRIYKK
Sbjct: 149 KPPKGLKTNWIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDDWVLCRIYKK 204

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score =  244 bits (624), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 117/194 (60%), Positives = 137/194 (70%), Gaps = 19/194 (9%)

Query: 8   ELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYF 67
           ELPPGFRFHPTDEEL+VHYL+ +A   P PV+II EVD+YKFDPW+LPEKA FGE EWYF
Sbjct: 34  ELPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYF 93

Query: 68  FSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-----GSKYLGVKKALVFYKGRPPKG 122
           FSPRDRKY NG RPNRA  SGYWKATGTDK I       G + +GVKKALVFY+G+PP+G
Sbjct: 94  FSPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRG 153

Query: 123 IKTDWIMHEYRLNDP-------TRQPYKHNG-----SMKLDDWVLCRIYKKRQTGSRSVL 170
           +KT+WIMHEYRL          +R P    G     S++LDDWVLCRIYKK    + +V 
Sbjct: 154 LKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAAAVG 213

Query: 171 DAKVEEDQSCVDQL 184
           D   +    C D +
Sbjct: 214 DE--QRSMECEDSV 225

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score =  243 bits (620), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 113/176 (64%), Positives = 130/176 (73%), Gaps = 19/176 (10%)

Query: 5   ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKE 64
           ++ ELPPGFRFHPTDEEL+VHYL+ +A   P PV+II EVD+YKFDPW+LPEKA  GE+E
Sbjct: 30  SAPELPPGFRFHPTDEELVVHYLKKKADKAPLPVNIIAEVDLYKFDPWELPEKATIGEQE 89

Query: 65  WYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGS-------KYLGVKKALVFYKG 117
           WYFFSPRDRKYPNG RPNRA  SGYWKATGTDK I           + LGVKKALVFY+G
Sbjct: 90  WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRG 149

Query: 118 RPPKGIKTDWIMHEYRLND------------PTRQPYKHNGSMKLDDWVLCRIYKK 161
           +PPKG+KT+WIMHEYRL D            P     +   S++LDDWVLCRIYKK
Sbjct: 150 KPPKGLKTNWIMHEYRLTDASGSTTATNRPPPVTGGSRAAASLRLDDWVLCRIYKK 205

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
122894106	264	NAC domain protein [Citrus sinensis]	0.888	0.962	1.0	1e-151
255562922	281	NAC domain-containing protein, putative	0.933	0.950	0.670	1e-103
260600584	282	NAP-like transcription factor [Vitis vin	0.954	0.968	0.657	1e-101
296086346	282	unnamed protein product [Vitis vinifera]	0.951	0.964	0.652	1e-101
359473352	817	PREDICTED: cytochrome P450 704C1-like [V	0.937	0.328	0.625	3e-97
302398991	280	NAC domain class transcription factor [M	0.849	0.867	0.669	5e-96
302399035	279	NAC domain class transcription factor [M	0.849	0.870	0.681	4e-95
351728011	279	NAC domain protein [Glycine max] gi|1879	0.940	0.964	0.613	7e-94
352144623	287	NAC domain protein NAC2 [Salvia miltiorr	0.972	0.968	0.610	1e-93
449434768	290	PREDICTED: NAC transcription factor 29-l	0.930	0.917	0.610	4e-93

>gi|122894106|gb|ABM67699.1| NAC domain protein [Citrus sinensis]

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 254/254 (100%), Positives = 254/254 (100%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
           MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF
Sbjct: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP
Sbjct: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120

Query: 121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSC 180
           KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSC
Sbjct: 121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSC 180

Query: 181 VDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQ 240
           VDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQ
Sbjct: 181 VDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQ 240

Query: 241 NGINNNAASDDQFE 254
           NGINNNAASDDQFE
Sbjct: 241 NGINNNAASDDQFE 254

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562922|ref|XP_002522466.1| NAC domain-containing protein, putative [Ricinus communis] gi|223538351|gb|EEF39958.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/291 (67%), Positives = 221/291 (75%), Gaps = 24/291 (8%)

Query: 5   ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKE 64
            ++ELPPGFRFHPTDEELI++YLRNQATSRPCPVSIIPEVDIYKFDPWQLPEK+EF E E
Sbjct: 6   CNSELPPGFRFHPTDEELIMYYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKSEFVENE 65

Query: 65  WYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIK 124
           WYFF+PRDRKYPNG RPNRATVSGYWKATGTDKAIY  SKY+GVKKALVFYKGRPPKGIK
Sbjct: 66  WYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSASKYVGVKKALVFYKGRPPKGIK 125

Query: 125 TDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQL 184
           TDWIMHEYRLND  +Q  K NGSM+LDDWVLCRIYKKRQ      L+ K+E   + +D+ 
Sbjct: 126 TDWIMHEYRLNDSRKQASKQNGSMRLDDWVLCRIYKKRQMARH--LEEKIEYRNTQLDKP 183

Query: 185 GKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQNGIN 244
                    +N   EQ+ M+KFPRT SL+HL++L+Y  PISQLLNDNT N ++DFQN + 
Sbjct: 184 A--------SNDISEQQ-MLKFPRTFSLSHLLDLDYMGPISQLLNDNTCNASFDFQNIMA 234

Query: 245 NNAASDDQFENKLQPSDMH---------QVNHSDSLNQQSLFVNPTVYEFQ 286
                 DQ E K Q  +M          QVN   +LN Q LFVNP VYEFQ
Sbjct: 235 K--VETDQVE-KFQLGEMSQQYVDSGKLQVNQGSALN-QPLFVNPMVYEFQ 281

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|260600584|gb|ACX47024.1| NAP-like transcription factor [Vitis vinifera]

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/295 (65%), Positives = 226/295 (76%), Gaps = 22/295 (7%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
           M+ + S++LPPGFRFHPTDEELI++YL+NQATS+PCPVSIIPEVDIYKF+PW+LPEKAEF
Sbjct: 1   MDGKGSSQLPPGFRFHPTDEELIMYYLKNQATSKPCPVSIIPEVDIYKFEPWELPEKAEF 60

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           GE EWYFFSPRDRKYPNG RPNRATVSGYWKATGTDKAIY G+KY+GVKKALVFYKGRPP
Sbjct: 61  GENEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKAIYSGAKYVGVKKALVFYKGRPP 120

Query: 121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSC 180
           KGIKTDWIMHEYRL+D   +P KHNGSM+LDDWVLCRIYKK+  G   +L+ K E     
Sbjct: 121 KGIKTDWIMHEYRLSDSRPRPKKHNGSMRLDDWVLCRIYKKKHVG--RILEEKEENLGPQ 178

Query: 181 VDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQ 240
           +         V +++   EQ LM KFPRT SLAHL+++EY  PISQLL DN+Y+  +DFQ
Sbjct: 179 IP--------VTNSDDGGEQHLM-KFPRTFSLAHLLDMEYLGPISQLLGDNSYHSAFDFQ 229

Query: 241 NGINNNAASD----DQFENKLQP-----SDMHQVNHSDSLNQQSLFVNPTVYEFQ 286
             I+N A +D    D+FE    P     S   QVN +   N Q LFVNP VYEFQ
Sbjct: 230 GTISNIAGTDPPGVDKFELFQLPCQYNDSTKFQVNQNHIPN-QPLFVNP-VYEFQ 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086346|emb|CBI31935.3| unnamed protein product [Vitis vinifera]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/296 (65%), Positives = 225/296 (76%), Gaps = 24/296 (8%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
           M+ + S++LPPGFRFHPTDEELI++YL+NQATS+PCPVSIIPEVDIYKF+PW+LPEKAEF
Sbjct: 1   MDGKGSSQLPPGFRFHPTDEELIMYYLKNQATSKPCPVSIIPEVDIYKFEPWELPEKAEF 60

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           GE EWYFFSPRDRKYPNG RPNRATVSGYWKATGTDKAIY G+KY+GVKKALVFYKGRPP
Sbjct: 61  GENEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKAIYSGAKYVGVKKALVFYKGRPP 120

Query: 121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSC 180
           KGIKTDWIMHEYRL+D   +P KHNGSM+LDDWVLCRIYKK+  G   +L+ K E     
Sbjct: 121 KGIKTDWIMHEYRLSDSRPRPKKHNGSMRLDDWVLCRIYKKKHVG--RILEEKEE----- 173

Query: 181 VDQLGKTGGYVEHANASD-EQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDF 239
                  G  +   N+ D  ++  VKFPRT SLAHL+++EY  PISQLL DN+Y+  +DF
Sbjct: 174 -----NLGPQIPVTNSDDGGEQHQVKFPRTFSLAHLLDMEYLGPISQLLGDNSYHSAFDF 228

Query: 240 QNGINNNAASD----DQFENKLQP-----SDMHQVNHSDSLNQQSLFVNPTVYEFQ 286
           Q  I+N A +D    D+FE    P     S   QVN +   N Q LFVNP VYEFQ
Sbjct: 229 QGTISNIAGTDPPGVDKFELFQLPCQYNDSTKFQVNQNHIPN-QPLFVNP-VYEFQ 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473352|ref|XP_002271847.2| PREDICTED: cytochrome P450 704C1-like [Vitis vinifera]

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 182/291 (62%), Positives = 217/291 (74%), Gaps = 23/291 (7%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
           M+ + S++LPPGFRFHPTDEELI++YL+NQATS+PCPVSIIPEVDIYKF+PW+LP +  F
Sbjct: 1   MDGKGSSQLPPGFRFHPTDEELIMYYLKNQATSKPCPVSIIPEVDIYKFEPWELPGEFHF 60

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
            E EWYFFSPRDRKYPNG RPNRATVSGYWKATGTDKAIY G+KY+GVKKALVFYKGRPP
Sbjct: 61  IENEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKAIYSGAKYVGVKKALVFYKGRPP 120

Query: 121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSC 180
           KGIKTDWIMHEYRL+D   +P KHNGSM+LDDWVLCRIYKK+  G   +L+ K E     
Sbjct: 121 KGIKTDWIMHEYRLSDSRPRPKKHNGSMRLDDWVLCRIYKKKHVG--RILEEKEE----- 173

Query: 181 VDQLGKTGGYVEHANASD-EQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDF 239
                  G  +   N+ D  ++  VKFPRT SLAHL+++EY  PISQLL DN+Y+  +DF
Sbjct: 174 -----NLGPQIPVTNSDDGGEQHQVKFPRTFSLAHLLDMEYLGPISQLLGDNSYHSAFDF 228

Query: 240 QNGINNNAASD----DQFENKLQP-----SDMHQVNHSDSLNQQSLFVNPT 281
           Q  I+N A +D    D+FE    P     S   QVN  + +  Q LFVNP+
Sbjct: 229 QGTISNIAGTDPPGVDKFELFQLPCQYNDSTKFQVNQ-NHIPNQPLFVNPS 278

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398991|gb|ADL36790.1| NAC domain class transcription factor [Malus x domestica]

 Score =  357 bits (915), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 170/254 (66%), Positives = 202/254 (79%), Gaps = 11/254 (4%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
           MEA+ S++LPPGFRFHPTDEELIV YL+NQA+SRPCPVSIIPEVDIYKFDPW+LPEKAEF
Sbjct: 1   MEAKRSSDLPPGFRFHPTDEELIVFYLKNQASSRPCPVSIIPEVDIYKFDPWELPEKAEF 60

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           GE EWYFF+PRDRKYPNG RPNRATVSGYWKATGTDKAIY  SKY+GVKKALVFY+GRPP
Sbjct: 61  GENEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSESKYVGVKKALVFYQGRPP 120

Query: 121 KGIKTDWIMHEYRLNDPTR-QPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQS 179
           KG+K+DWIMHEYRL+D  + QP KH GSM+LDDWVLCRIYKK+  G ++ LD KVEEDQ 
Sbjct: 121 KGVKSDWIMHEYRLSDSRKQQPNKHLGSMRLDDWVLCRIYKKKHPG-KAYLDQKVEEDQK 179

Query: 180 CVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDF 239
              +  +T         ++E+++M+KFPR CS+  L++++Y  PISQL +DN     YDF
Sbjct: 180 IEMRTPETA-------KANEEQVMLKFPRACSITSLLDMDYLGPISQLFSDNIS--GYDF 230

Query: 240 QNGINNNAASDDQF 253
           Q  +    A   Q 
Sbjct: 231 QTSMAGAGAGQAQM 244

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399035|gb|ADL36812.1| NAC domain class transcription factor [Malus x domestica]

 Score =  353 bits (907), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 173/254 (68%), Positives = 202/254 (79%), Gaps = 11/254 (4%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
           MEA+ S++LPPGFRFHPTDEELI+ YL+ QATSRPCPVSIIPEVDIYKFDPW+LPEKAEF
Sbjct: 1   MEAKQSSQLPPGFRFHPTDEELIMFYLKYQATSRPCPVSIIPEVDIYKFDPWELPEKAEF 60

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           GE EWYFF+PRDRKYPNG RPNRATVSGYWKATGTDKAIY  SKY+GVKKALVFY+GRPP
Sbjct: 61  GENEWYFFTPRDRKYPNGIRPNRATVSGYWKATGTDKAIYSESKYVGVKKALVFYQGRPP 120

Query: 121 KGIKTDWIMHEYRLNDPTR-QPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQS 179
           KG+K+DWIMHEYRL D  + Q  K  GSM+LDDWVLCRIYKKRQ G ++ LD KVEED+ 
Sbjct: 121 KGVKSDWIMHEYRLGDTRKQQANKQLGSMRLDDWVLCRIYKKRQPG-KAYLDPKVEEDEK 179

Query: 180 CVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDF 239
                 +T      A A++EQ +M+KFPRTCS+  L++++Y  P+SQLL DN  N  YDF
Sbjct: 180 IEMTTPET------AKANEEQ-MMLKFPRTCSITSLLDMDYLGPMSQLLGDN--NSGYDF 230

Query: 240 QNGINNNAASDDQF 253
           Q+ +    A   Q 
Sbjct: 231 QSSLAGAGAGHAQM 244

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351728011|ref|NP_001238204.1| NAC domain protein [Glycine max] gi|187940301|gb|ACD39381.1| NAC domain protein [Glycine max]

 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 179/292 (61%), Positives = 214/292 (73%), Gaps = 23/292 (7%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
           ME + S+ LPPGFRFHPTDEELIV+YL NQATSRPCP SIIPEVDIYKFDPW+LPEK +F
Sbjct: 1   MENRTSSVLPPGFRFHPTDEELIVYYLCNQATSRPCPASIIPEVDIYKFDPWELPEKTDF 60

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           GEKEWYFFSPR+RKYPNG RPNRATVSGYWKATGTDKAIY GSK++GVKKALVFYKG+PP
Sbjct: 61  GEKEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHVGVKKALVFYKGKPP 120

Query: 121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSC 180
           KG+KTDWIMHEYRL    RQ  +  GSM+LDDWVLCRIYKK+  G    ++AK E   + 
Sbjct: 121 KGLKTDWIMHEYRLIGSRRQANRQVGSMRLDDWVLCRIYKKKNIGKS--MEAKEEYPIAL 178

Query: 181 VDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLNDNTYNFNYDFQ 240
           ++        +  AN   EQ+ MVKFPRT SL HL+E++Y  PIS +L+D TYN  +DFQ
Sbjct: 179 IN--------LTPANNDSEQE-MVKFPRTSSLTHLLEMDYLGPISHILSDATYNSTFDFQ 229

Query: 241 NGINNNAASDDQFENKLQPSDM--------HQVNHSDSLNQQSLFVNPTVYE 284
             IN      D F  K QP ++        +QV  + ++N  ++FVN   Y+
Sbjct: 230 --INTANGGIDPFV-KPQPVEIPYAADSGKYQVKQNSTIN-PTIFVNQVYYQ 277

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|352144623|gb|AEQ61906.1| NAC domain protein NAC2 [Salvia miltiorrhiza]

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 177/290 (61%), Positives = 209/290 (72%), Gaps = 12/290 (4%)

Query: 3   AQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGE 62
           ++ S+ LPPGFRFHPTDEELI++YLRNQATSRPCPV IIPEVDIYKFDPWQLP+KAEFGE
Sbjct: 4   SRISSGLPPGFRFHPTDEELIIYYLRNQATSRPCPVPIIPEVDIYKFDPWQLPDKAEFGE 63

Query: 63  KEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKG 122
            EWYFF+PRDRKYPNG RPNRA VSGYWKATGTDKAI+ GSKY+GVKKALVFYKGRPPKG
Sbjct: 64  NEWYFFTPRDRKYPNGVRPNRAAVSGYWKATGTDKAIHSGSKYVGVKKALVFYKGRPPKG 123

Query: 123 IKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVD 182
           +KTDWIMHEYRLN+   QPYK NGSM+LDDWVLCRIYKK+  G  S     ++ ++S V 
Sbjct: 124 VKTDWIMHEYRLNESRSQPYKQNGSMRLDDWVLCRIYKKKNLGRSSFEHQPIKVEESFVS 183

Query: 183 -QLGKTGGYVEHANASDEQKLMV---KFPRTCSLAHLVELEYF--APISQLLNDNTYNFN 236
            Q+       +    S+EQ+      +FPRT SL HL E + +  + ISQLLNDN+  +N
Sbjct: 184 HQIAAAND--DRNRGSEEQEAAAAAYRFPRTHSLTHLWEFDSYMGSSISQLLNDNSSLYN 241

Query: 237 YDFQNGINNNAASDDQFENKLQPSDMHQVNHSDSLNQQSLFVNPTVYEFQ 286
            +  N  N+N       E   Q SD    +H      Q+ FVNP   +FQ
Sbjct: 242 LNINNQENDNGGFFRAHEKLQQSSDSAAKSHV----HQTTFVNPVYDQFQ 287

Source: Salvia miltiorrhiza

Species: Salvia miltiorrhiza

Genus: Salvia

Family: Lamiaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434768|ref|XP_004135168.1| PREDICTED: NAC transcription factor 29-like [Cucumis sativus] gi|449530426|ref|XP_004172196.1| PREDICTED: NAC transcription factor 29-like [Cucumis sativus]

 Score =  347 bits (890), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 177/290 (61%), Positives = 210/290 (72%), Gaps = 24/290 (8%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
           M+ +  TELPPGFRFHPTDEELI+ YLRNQATS+PCPVSIIPEVDIYKFDPW LPEKA+ 
Sbjct: 1   MKKKTCTELPPGFRFHPTDEELIMFYLRNQATSKPCPVSIIPEVDIYKFDPWDLPEKADS 60

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           GE EWYFFSPRDRKYPNG RPNRA VSGYWKATGTDKAIY  SKY+GVKKALVFYKG+PP
Sbjct: 61  GENEWYFFSPRDRKYPNGVRPNRAAVSGYWKATGTDKAIYSASKYVGVKKALVFYKGKPP 120

Query: 121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSC 180
           KG+KTDWIMHEYRL +  +Q  K +GSM+LDDWVLCRIYKKR + ++ +L+ K EE  + 
Sbjct: 121 KGVKTDWIMHEYRLIESNKQSMKQSGSMRLDDWVLCRIYKKRHS-NKGLLEEKTEELAAQ 179

Query: 181 VDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVELEYFAPISQLLND-NTYNFNYDF 239
            D +   G          + + M+KFPRT S+ HL++L+Y  PISQL ND ++ N    F
Sbjct: 180 NDMVEGNG----------QGQQMMKFPRTFSITHLLDLDYLGPISQLFNDSSSMNPTLGF 229

Query: 240 QNGINNNAASDDQF----ENKLQPSDMH------QVNHSDSLNQQSLFVN 279
           QN  N  AA+        E +L P D        QVNHS++   Q +FVN
Sbjct: 230 QN--NTAAAAFTSVGKIEEGELMPLDYSSSSTDFQVNHSNNFFNQPIFVN 277

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.856	0.914	0.623	7.2e-84
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.555	0.496	0.702	3e-62
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.597	0.469	0.650	3.8e-62
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.590	0.523	0.657	3.4e-61
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.555	0.550	0.65	6.9e-59
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.555	0.501	0.656	2.8e-57
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.566	0.511	0.646	4.6e-57
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.559	0.632	0.641	7.5e-57
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.863	0.791	0.479	9.9e-55
TAIR|locus:2124014	314	RD26 "RESPONSIVE TO DESICCATIO	0.493	0.449	0.549	2.9e-54

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
 Identities = 162/260 (62%), Positives = 194/260 (74%)

Query:     1 MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
             ME  + + LPPGFRFHPTDEELIV+YLRNQ  S+PCPVSIIPEVDIYKFDPWQLPEK EF
Sbjct:     1 MEVTSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEF 60

Query:    61 GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
             GE EWYFFSPR+RKYPNG RPNRA VSGYWKATGTDKAI+ GS  +GVKKALVFYKGRPP
Sbjct:    61 GENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPP 120

Query:   121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSC 180
             KGIKTDWIMHEYRL+D  +   K NGSM+LD+WVLCRIYKKR  G+  +L+    E +  
Sbjct:   121 KGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKR--GASKLLN----EQEGF 174

Query:   181 VDQL---GKTGGYVEHANASDEQKLMV----KFPRTCSLAHLVELEYFAPISQLLNDNTY 233
             +D++    +T   V  A    E+++M+    K PRTCSLAHL+E++Y  P+S +  DN  
Sbjct:   175 MDEVLMEDETKVVVNEAERRTEEEIMMMTSMKLPRTCSLAHLLEMDYMGPVSHI--DNFS 232

Query:   234 NFNYDFQNGINNNAASDDQF 253
              F++  Q    ++   D QF
Sbjct:   233 QFDHLHQPDSESSWFGDLQF 252

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
 Identities = 118/168 (70%), Positives = 134/168 (79%)

Query:     9 LPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFF 68
             LPPGFRFHPTDEEL++HYL+ +A S P PV+II +VD+YKFDPW+LP KA FGE+EWYFF
Sbjct:    17 LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFF 76

Query:    69 SPRDRKYPNGTRPNRATVSGYWKATGTDKAIY----GGSKYLGVKKALVFYKGRPPKGIK 124
             SPRDRKYPNG RPNRA  SGYWKATGTDK +     GGSK +GVKKALVFY G+PPKG+K
Sbjct:    77 SPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVK 136

Query:   125 TDWIMHEYRLND--PTRQPYKHN--GSMKLDDWVLCRIYKKRQ-TGSR 167
             +DWIMHEYRL D  PT      N   S++LDDWVLCRIYKK   T SR
Sbjct:   137 SDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTASR 184

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 121/186 (65%), Positives = 141/186 (75%)

Query:     9 LPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFF 68
             LPPGFRFHPTDEEL+VHYL+ +A S P PV+II EVD+YKFDPW+LP KA FGE+EWYFF
Sbjct:    17 LPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFF 76

Query:    69 SPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG--GSKYLGVKKALVFYKGRPPKGIKTD 126
             SPRDRKYPNG RPNRA  SGYWKATGTDK +    G++ +GVKKALVFY G+PPKG+K+D
Sbjct:    77 SPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSD 136

Query:   127 WIMHEYRL--NDPTRQP------YKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQ 178
             WIMHEYRL  N P  +P       K N S++LDDWVLCRIYKK    SR V + K   D 
Sbjct:   137 WIMHEYRLIENKPNNRPPGCDFGNKKN-SLRLDDWVLCRIYKKNNA-SRHVDNDK---DH 191

Query:   179 SCVDQL 184
               +D +
Sbjct:   192 DMIDYI 197

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 117/178 (65%), Positives = 132/178 (74%)

Query:     9 LPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFF 68
             LPPGFRFHPTDEEL+VHYL+ +A S P PVSII E+D+YKFDPW+LP KA FGE EWYFF
Sbjct:    16 LPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFF 75

Query:    69 SPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKYLGVKKALVFYKGRPPKGIKTDW 127
             SPRDRKYPNG RPNRA  SGYWKATGTDK I+   S  +GVKKALVFY G+PPKGIKTDW
Sbjct:    76 SPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIKTDW 135

Query:   128 IMHEYRLND--------PTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEED 177
             IMHEYRL D        P         S++LDDWVLCRIYKK  +   ++    + ED
Sbjct:   136 IMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSSQRPTMERVLLRED 193

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
 Identities = 104/160 (65%), Positives = 123/160 (76%)

Query:     8 ELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYF 67
             +LPPGFRFHPTDEEL++HYL  +  S+   V II E+D+YK+DPW+LP  A +GEKEWYF
Sbjct:     6 QLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYF 65

Query:    68 FSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDW 127
             FSPRDRKYPNG+RPNR+  SGYWKATG DK I G  K +G+KKALVFY G+ PKG KT+W
Sbjct:    66 FSPRDRKYPNGSRPNRSAGSGYWKATGADKPI-GLPKPVGIKKALVFYAGKAPKGEKTNW 124

Query:   128 IMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 167
             IMHEYRL D  R   K   S++LDDWVLCRIY K+    R
Sbjct:   125 IMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATER 164

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 107/163 (65%), Positives = 126/163 (77%)

Query:     9 LPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFF 68
             LPPGFRF+PTDEEL+V YL  +A      + +I E+D+YKFDPW LP KA FGEKEWYFF
Sbjct:    14 LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFF 73

Query:    69 SPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWI 128
             SPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY G+ PKG KT+WI
Sbjct:    74 SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWI 133

Query:   129 MHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLD 171
             MHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  + V D
Sbjct:   134 MHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQSSAQKQVYD 172

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 108/167 (64%), Positives = 128/167 (76%)

Query:     1 MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
             ++  A   LPPGFRF+PTDEEL+V YL  +A      + +I E+D+YKFDPW LP KA F
Sbjct:     6 LDPLAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALF 65

Query:    61 GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
             GEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY G+ P
Sbjct:    66 GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAP 125

Query:   121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 167
             KG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK QT ++
Sbjct:   126 KGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKK-QTSAQ 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 104/162 (64%), Positives = 126/162 (77%)

Query:     1 MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
             M++ A  + PPGFRFHPTDEEL++ YL  +  S+P P  II E+D+Y++DPW LP+ A +
Sbjct:     2 MKSGADLQFPPGFRFHPTDEELVLMYLCRKCASQPIPAPIITELDLYRYDPWDLPDMALY 61

Query:    61 GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
             GEKEWYFFSPRDRKYPNG+RPNRA  +GYWKATG DK I G  K +G+KKALVFY G+PP
Sbjct:    62 GEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPI-GRPKPVGIKKALVFYSGKPP 120

Query:   121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKR 162
              G KT+WIMHEYRL D  R   K N S++LDDWVLCRIY K+
Sbjct:   121 NGEKTNWIMHEYRLADVDRSVRKKN-SLRLDDWVLCRIYNKK 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
 Identities = 126/263 (47%), Positives = 159/263 (60%)

Query:     4 QASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEK 63
             +A   LP GFRFHPTDEEL+  YL  +  S P  V +I E+D+YKF+PW+LPE A +GEK
Sbjct:    45 KAELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEK 104

Query:    64 EWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGI 123
             EWYFFS RDRKYPNG+RPNRA  +GYWKATG DK I G  K LG+KKALVFY G+ PKGI
Sbjct:   105 EWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGI 163

Query:   124 KTDWIMHEYRL-N-DPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDA--KVEEDQS 179
             KT+WIMHEYRL N D +    K N +++LDDWVLCRIY K+ T  + +  A  K  E  S
Sbjct:   164 KTNWIMHEYRLANVDRSASTNKKN-NLRLDDWVLCRIYNKKGTMEKYLPAAAEKPTEKMS 222

Query:   180 CVDQLGKTGGYVEHANASDEQKLMVKFPRTCSLAHLVEL-----EYFAPISQLLNDNTY- 233
               D    +         SD  ++  + P+  +L   +E        F+ I  L ND    
Sbjct:   223 TSDSRCSSHVISPDVTCSDNWEVESE-PKWINLEDALEAFNDDTSMFSSIGLLQNDAFVP 281

Query:   234 NFNYDFQNGINNNAASDDQFENK 256
              F Y   + +++     D FE K
Sbjct:   282 QFQYQSSDFVDS---FQDPFEQK 301

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2124014 RD26 "RESPONSIVE TO DESICCATION 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
 Identities = 83/151 (54%), Positives = 100/151 (66%)

Query:    57 KAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYK 116
             KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY 
Sbjct:    79 KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYA 138

Query:   117 GRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEE 176
             G+ PKG KT+WIMHEYRL + +R     +GS KLDDWVLCRIYKK     R      V  
Sbjct:   139 GKAPKGTKTNWIMHEYRLIEHSRS----HGSSKLDDWVLCRIYKKTSGSQRQA----VTP 190

Query:   177 DQSCVDQLGKTGGYVEHANASDEQKLMVKFP 207
              Q+C ++    G     ++  D+  ++  FP
Sbjct:   191 VQACREEHSTNGSSSSSSSQLDD--VLDSFP 219

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49255	NAC29_ARATH	No assigned EC number	0.6230	0.8566	0.9141	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	286
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	2e-80

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  238 bits (610), Expect = 2e-80
 Identities = 89/129 (68%), Positives = 107/129 (82%), Gaps = 3/129 (2%)

Query: 9   LPPGFRFHPTDEELIVHYLRNQATSRPCPV-SIIPEVDIYKFDPWQLPE-KAEFGEKEWY 66
           LPPGFRFHPTDEEL+V+YL+ +   +P P+  +IPEVDIYKF+PW LP+ KA+ G++EWY
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWY 60

Query: 67  FFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY-GGSKYLGVKKALVFYKGRPPKGIKT 125
           FFSPRDRKYPNG+R NRAT SGYWKATG DK +   G + +G+KK LVFYKGR PKG KT
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEKT 120

Query: 126 DWIMHEYRL 134
           DW+MHEYRL
Sbjct: 121 DWVMHEYRL 129

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	286
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=3.6e-45  Score=303.39  Aligned_cols=127  Identities=61%  Similarity=1.191  Sum_probs=98.1

Q ss_pred             CCCCceeCCChHHHHHHHHHHhhcCCCCCC-cceeeccCCCCCCCCCCccccCCceeEEEeecCCCCCCCCCCCcccccC
Q 023197            9 LPPGFRFHPTDEELIVHYLRNQATSRPCPV-SIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVS   87 (286)
Q Consensus         9 LPpGfRF~PTDEELI~~YL~~Ki~g~p~p~-~iI~evDVY~~~PweLp~~~~~ge~eWYFFt~r~rk~~nG~R~~R~~g~   87 (286)
                      |||||||+|||+|||.+||++|+.|.+++. .+|+++|||++|||+||+....++++||||+++++++.+|.|++|++++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~   80 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGG   80 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETT
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccc
Confidence            899999999999999999999999999888 7999999999999999965455678999999999999999999999999


Q ss_pred             CeEEecccCceEec-CCeeeeeEEEEEEeeCCCCCCCCcCeeEeeeeeC
Q 023197           88 GYWKATGTDKAIYG-GSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLN  135 (286)
Q Consensus        88 G~WKatG~~k~I~~-~g~~VG~KktL~Fy~g~~p~g~kT~WiMhEY~L~  135 (286)
                      |+||++|+.+.|.+ ++.+||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        81 G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   81 GYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             eEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            99999999999998 8899999999999999888999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	286
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		1e-59
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		2e-59
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		2e-57

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  226 bits (575), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/159 (66%), Positives = 124/159 (77%), Gaps = 4/159 (2%)
Query: 9   LPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFF 68
           LPPGFRF+PTDEEL+V YL  +A      + +I E+D+YKFDPW LP KA FGEKEWYFF
Sbjct: 20  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFF 79
Query: 69  SPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWI 128
           SPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY G+ PKG KT+WI
Sbjct: 80  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWI 139
Query: 129 MHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 167
           MHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  +
Sbjct: 140 MHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQSSAQK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  226 bits (575), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/159 (66%), Positives = 124/159 (77%), Gaps = 4/159 (2%)
Query: 9   LPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFF 68
           LPPGFRF+PTDEEL+V YL  +A      + +I E+D+YKFDPW LP KA FGEKEWYFF
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFF 76
Query: 69  SPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWI 128
           SPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY G+ PKG KT+WI
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWI 136
Query: 129 MHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 167
           MHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  +
Sbjct: 137 MHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQSSAQK 171

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  218 bits (556), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 124/162 (76%), Gaps = 1/162 (0%)
Query: 2   EAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFG 61
           +A+A   LPPGFRFHPTD+EL+ HYL  +A  +  PV II EVD+YKFDPW LPE+A FG
Sbjct: 8   DAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFG 67
Query: 62  EKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPK 121
            +EWYFF+PRDRKYPNG+RPNRA  +GYWKATG DK +    + LG+KKALVFY G+ P+
Sbjct: 68  AREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPR 127
Query: 122 GIKTDWIMHEYRL-NDPTRQPYKHNGSMKLDDWVLCRIYKKR 162
           G+KTDWIMHEYRL +          GS++LDDWVLCR+Y K+
Sbjct: 128 GVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	286
1ut7_A	171	No apical meristem protein; transcription regulati	1e-111
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-110

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  316 bits (813), Expect = e-111
 Identities = 105/167 (62%), Positives = 124/167 (74%), Gaps = 4/167 (2%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
            +      LPPGFRF+PTDEEL+V YL  +A      + +I E+D+YKFDPW LP KA F
Sbjct: 9   TDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF 68

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           GEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY G+ P
Sbjct: 69  GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAP 128

Query: 121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 167
           KG KT+WIMHEYRL +P+R     NGS KLDDWVLCRIYKK+ +  +
Sbjct: 129 KGTKTNWIMHEYRLIEPSR----RNGSTKLDDWVLCRIYKKQSSAQK 171

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  316 bits (812), Expect = e-110
 Identities = 103/168 (61%), Positives = 126/168 (75%), Gaps = 1/168 (0%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
            +A+A   LPPGFRFHPTD+EL+ HYL  +A  +  PV II EVD+YKFDPW LPE+A F
Sbjct: 7   RDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALF 66

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           G +EWYFF+PRDRKYPNG+RPNRA  +GYWKATG DK +    + LG+KKALVFY G+ P
Sbjct: 67  GAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAP 126

Query: 121 KGIKTDWIMHEYRLNDPTRQPY-KHNGSMKLDDWVLCRIYKKRQTGSR 167
           +G+KTDWIMHEYRL D  R       GS++LDDWVLCR+Y K+    +
Sbjct: 127 RGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	286
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=5.8e-60  Score=411.87  Aligned_cols=160  Identities=64%  Similarity=1.253  Sum_probs=138.4

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHHhhcCCCCCCcceeeccCCCCCCCCCCccccCCceeEEEeecCCCCCCCCCCCccc
Q 023197            5 ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRA   84 (286)
Q Consensus         5 ~~~~LPpGfRF~PTDEELI~~YL~~Ki~g~p~p~~iI~evDVY~~~PweLp~~~~~ge~eWYFFt~r~rk~~nG~R~~R~   84 (286)
                      ..+.|||||||||||||||.|||++|+.|.++|..+|+++|||++|||+||+.+..++++|||||+|++||++|.|++|+
T Consensus        11 ~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR~   90 (174)
T 3ulx_A           11 AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRA   90 (174)
T ss_dssp             STTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCEE
T ss_pred             cccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCceee
Confidence            46799999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             ccCCeEEecccCceEecCCeeeeeEEEEEEeeCCCCCCCCcCeeEeeeeeCCCCCCCC-CCCCCCCCCcEEEEEEEeeCC
Q 023197           85 TVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPY-KHNGSMKLDDWVLCRIYKKRQ  163 (286)
Q Consensus        85 ~g~G~WKatG~~k~I~~~g~~VG~KktL~Fy~g~~p~g~kT~WiMhEY~L~~~~~~~~-~~~~~~~~~d~VLCRIy~k~~  163 (286)
                      +++||||++|++++|.++|.+||+||+|+||.+++|++.||+|+||||+|........ ...+++++++|||||||+|++
T Consensus        91 t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~~  170 (174)
T 3ulx_A           91 AGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKN  170 (174)
T ss_dssp             ETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEESCC
T ss_pred             cCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEcCC
Confidence            9999999999999999888999999999999999999999999999999998754321 122346789999999999875


Q ss_pred             C
Q 023197          164 T  164 (286)
Q Consensus       164 ~  164 (286)
                      .
T Consensus       171 ~  171 (174)
T 3ulx_A          171 E  171 (174)
T ss_dssp             -
T ss_pred             C
Confidence            3

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=5.2e-59  Score=404.97  Aligned_cols=158  Identities=66%  Similarity=1.228  Sum_probs=134.1

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHHhhcCCCCCCcceeeccCCCCCCCCCCccccCCceeEEEeecCCCCCCCCCCCccc
Q 023197            5 ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRA   84 (286)
Q Consensus         5 ~~~~LPpGfRF~PTDEELI~~YL~~Ki~g~p~p~~iI~evDVY~~~PweLp~~~~~ge~eWYFFt~r~rk~~nG~R~~R~   84 (286)
                      .+..|||||||||||||||.|||++|+.|.+++..+|+++|||++|||+||+.+..++++||||+++++||++|.|++|+
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~   92 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRV   92 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEE
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCccccc
Confidence            46799999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             ccCCeEEecccCceEecCCeeeeeEEEEEEeeCCCCCCCCcCeeEeeeeeCCCCCCCCCCCCCCCCCcEEEEEEEeeCCC
Q 023197           85 TVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQT  164 (286)
Q Consensus        85 ~g~G~WKatG~~k~I~~~g~~VG~KktL~Fy~g~~p~g~kT~WiMhEY~L~~~~~~~~~~~~~~~~~d~VLCRIy~k~~~  164 (286)
                      |++||||++|++++|.+++.+||+||+|+||.+++|++.||+|+||||+|.....    ..+.+..++|||||||+|+..
T Consensus        93 t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~----~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           93 AGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR----RNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             ETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC------------CCEEEEEEEECC--
T ss_pred             CCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCcc----ccCcccCCCEEEEEEEEcCCC
Confidence            9999999999999999988999999999999999999999999999999998742    122345799999999999865


Q ss_pred             CC
Q 023197          165 GS  166 (286)
Q Consensus       165 ~~  166 (286)
                      .+
T Consensus       169 ~~  170 (171)
T 1ut7_A          169 AQ  170 (171)
T ss_dssp             --
T ss_pred             CC
Confidence            43

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	286
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	6e-79

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  234 bits (598), Expect = 6e-79
 Identities = 105/162 (64%), Positives = 123/162 (75%), Gaps = 4/162 (2%)

Query: 1   MEAQASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEF 60
            +      LPPGFRF+PTDEEL+V YL  +A      + +I E+D+YKFDPW LP KA F
Sbjct: 9   TDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF 68

Query: 61  GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPP 120
           GEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY G+ P
Sbjct: 69  GEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAP 128

Query: 121 KGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKR 162
           KG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+
Sbjct: 129 KGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	286
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.6e-56  Score=383.33  Aligned_cols=154  Identities=68%  Similarity=1.256  Sum_probs=133.4

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHHhhcCCCCCCcceeeccCCCCCCCCCCccccCCceeEEEeecCCCCCCCCCCCccc
Q 023197            5 ASTELPPGFRFHPTDEELIVHYLRNQATSRPCPVSIIPEVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRA   84 (286)
Q Consensus         5 ~~~~LPpGfRF~PTDEELI~~YL~~Ki~g~p~p~~iI~evDVY~~~PweLp~~~~~ge~eWYFFt~r~rk~~nG~R~~R~   84 (286)
                      .+++|||||||+|||||||.|||++|+.|.|++..+|+++|||++|||+||+.+..++++|||||++++++++|.|++|+
T Consensus        13 ~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R~   92 (166)
T d1ut7a_          13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRV   92 (166)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEE
T ss_pred             ccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCccccc
Confidence            57899999999999999999999999999999999999999999999999998888889999999999999999999999


Q ss_pred             ccCCeEEecccCceEecCCeeeeeEEEEEEeeCCCCCCCCcCeeEeeeeeCCCCCCCCCCCCCCCCCcEEEEEEEeeC
Q 023197           85 TVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKR  162 (286)
Q Consensus        85 ~g~G~WKatG~~k~I~~~g~~VG~KktL~Fy~g~~p~g~kT~WiMhEY~L~~~~~~~~~~~~~~~~~d~VLCRIy~k~  162 (286)
                      +++|+||++|+++.|.++|.+||+||+|+||.++.+++.+|+|+||||+|.+....    ++....++|||||||+|+
T Consensus        93 ~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~----~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          93 AGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             ETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC------------CCEEEEEEEECC
T ss_pred             cCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccc----cCccccCCEEEEEEEecC
Confidence            99999999999999999999999999999999999999999999999999886532    233457899999999984