Citrus Sinensis ID: 023213

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
ccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccHHHHHHHcccccccEEcccccHHHHHHHHHHHccccEEEEEccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccEEEEEEEEEcccEEEEEEEccccccccccc
cccccccccEEccccHccHccccccccccEEEEEcccccccccHcccccEEccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHccccccccccccHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccEEEEEEEEccccEEEEEEEEEEEEEEEEc
mstasinnWCLTSVSQAQSSliksstlrpsivarlnspasppslirnepvfaapapiinpnwredmaNQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAqlqtpsdtkafdSVERIKEGFIHFkrekyeknpALYSELakgqspkymtkYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMsftfdgnnstdfIEDWVKIgipakskvltehgdkpfgdqctycekeAVNVSlsnlltypfvreGLVNKTLALKGGYYDFVNGSFElwgldfslspplsv
mstasinnwcLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEqitaqlqtpsdtkafdsVERIKEGfihfkrekyeknPALYSELAKGQSPKYMTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLdfslspplsv
MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYeeaiealkkllkekedlkPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMTKyagvgaaveyavLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
*******NWCLT*************************************VFAAPAPIINPNW***************************************************SVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFS*******
******************************************************APIIN*****************ALK*LLK******************************SVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHG*KPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLS*
MSTASINNWCLTSV**********STLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
*************************TLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWRxxxxxxxxxxxxxxxxxxxxxxxxxKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query285 2.2.26 [Sep-21-2011]
P27141321 Carbonic anhydrase, chlor N/A no 0.985 0.875 0.643 1e-107
P27140347 Carbonic anhydrase, chlor yes no 0.996 0.818 0.637 1e-104
P16016319 Carbonic anhydrase, chlor N/A no 0.964 0.862 0.619 1e-103
P17067328 Carbonic anhydrase, chlor N/A no 0.992 0.862 0.596 1e-99
P46510330 Carbonic anhydrase OS=Fla N/A no 0.975 0.842 0.597 1e-97
P46512330 Carbonic anhydrase 1 OS=F N/A no 0.859 0.742 0.645 1e-97
P46511330 Carbonic anhydrase OS=Fla N/A no 0.859 0.742 0.645 2e-97
P46281329 Carbonic anhydrase OS=Fla N/A no 0.859 0.744 0.642 5e-97
P42737259 Carbonic anhydrase 2, chl no no 0.771 0.849 0.667 6e-91
P46513190 Carbonic anhydrase 2 (Fra N/A no 0.529 0.794 0.563 4e-53
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function desciption
 Score =  388 bits (996), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/325 (64%), Positives = 238/325 (73%), Gaps = 44/325 (13%)

Query: 1   MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPS---LIRNEPVFAAPAPI 57
           MSTASIN+ CLT +S AQ+SL K +  RP   ARL++ +S  S   LIRNEPVFAAP PI
Sbjct: 1   MSTASINS-CLT-ISPAQASLKKPT--RPVAFARLSNSSSSTSVPSLIRNEPVFAAPTPI 56

Query: 58  INPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVER 117
           INP  RE+MA +SYE+AI AL+KLL EK +L P+AAA+V+QITA+LQ+   +K FD VE 
Sbjct: 57  INPILREEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEH 116

Query: 118 IKEGFIHFKREKYEKNPALYSELAKGQSPKYM---------------------------- 149
           +K GFIHFK EKYEKNPALY EL+KGQSPK+M                            
Sbjct: 117 MKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNI 176

Query: 150 ---------TKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIE 200
                    T+Y+GVGAA+EYAVLHLKV NIVVIGHSACGGIKGLMS   DG+ ST FIE
Sbjct: 177 ANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIE 236

Query: 201 DWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKG 260
           DWVKIG+PAK+KV  EH DK F DQCT CEKEAVNVSL NLLTYPFVREGLV KTLALKG
Sbjct: 237 DWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKG 296

Query: 261 GYYDFVNGSFELWGLDFSLSPPLSV 285
           G+YDFVNG FELWGL+F LSP LSV
Sbjct: 297 GHYDFVNGGFELWGLEFGLSPSLSV 321
Reversible hydration of carbon dioxide.
Nicotiana tabacum (taxid: 4097)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Back     alignment and function description
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2 Back     alignment and function description
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Back     alignment and function description
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Back     alignment and function description
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Back     alignment and function description
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Back     alignment and function description
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query285
339958979321 chloroplast carbonic anhydrase [Dimocarp 0.996 0.884 0.723 1e-127
225452452335 PREDICTED: carbonic anhydrase, chloropla 0.996 0.847 0.661 1e-117
118489443321 unknown [Populus trichocarpa x Populus d 0.989 0.878 0.663 1e-114
255567325326 carbonic anhydrase, putative [Ricinus co 0.996 0.871 0.660 1e-114
224055529332 predicted protein [Populus trichocarpa] 0.989 0.849 0.666 1e-114
1354517320 carbonic anhydrase [Populus tremula x Po 0.985 0.878 0.663 1e-113
1354515320 carbonic anhydrase [Populus tremula x Po 0.985 0.878 0.660 1e-113
112292669324 chloroplast carbonic anhydrase [Pachysan 0.996 0.876 0.655 1e-110
20502881326 carbonic anhydrase [Gossypium hirsutum] 0.992 0.868 0.646 1e-109
147821810331 hypothetical protein VITISV_037833 [Viti 0.996 0.858 0.614 1e-108
>gi|339958979|gb|AEK25173.1| chloroplast carbonic anhydrase [Dimocarpus longan] Back     alignment and taxonomy information
 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/322 (72%), Positives = 254/322 (78%), Gaps = 38/322 (11%)

Query: 1   MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINP 60
           MSTASIN+  LTS+  +QSSL K +TLRP+I ARLNS  SPPSLIRNEPVFAAPAPIINP
Sbjct: 1   MSTASINSCSLTSLFSSQSSL-KRATLRPTISARLNSSPSPPSLIRNEPVFAAPAPIINP 59

Query: 61  NWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKE 120
            WREDMAN+SYEEAIEALKKLL EK++LKPVAAAKVEQITAQLQT +D K FD+VER+K+
Sbjct: 60  TWREDMANKSYEEAIEALKKLLSEKDELKPVAAAKVEQITAQLQTTADGKPFDAVERMKD 119

Query: 121 GFIHFKREKYEKNPALYSELAKGQSPKYMT------------------------------ 150
           GFIHFKREKYEKNPALY ELAKGQSPK+M                               
Sbjct: 120 GFIHFKREKYEKNPALYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANI 179

Query: 151 -------KYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWV 203
                  KYAGVGAAVEYAVLHLKV  IVVIGHSACGGIKGLMSFTF+G NSTDFIEDWV
Sbjct: 180 VPPYDQIKYAGVGAAVEYAVLHLKVQEIVVIGHSACGGIKGLMSFTFEGANSTDFIEDWV 239

Query: 204 KIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYY 263
           KIG+PAK  VL EHG  PF  QCTYCEK AV+VS+ NLL+YPFVR+GLV KTLALKGGYY
Sbjct: 240 KIGLPAKGSVLAEHGGVPFEQQCTYCEKAAVSVSIGNLLSYPFVRDGLVKKTLALKGGYY 299

Query: 264 DFVNGSFELWGLDFSLSPPLSV 285
           DFVNGSFELW ++F LSPPLSV
Sbjct: 300 DFVNGSFELWSVEFGLSPPLSV 321

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225452452|ref|XP_002277957.1| PREDICTED: carbonic anhydrase, chloroplastic [Vitis vinifera] gi|296087661|emb|CBI34917.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|118489443|gb|ABK96524.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|255567325|ref|XP_002524642.1| carbonic anhydrase, putative [Ricinus communis] gi|223536003|gb|EEF37661.1| carbonic anhydrase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224055529|ref|XP_002298524.1| predicted protein [Populus trichocarpa] gi|222845782|gb|EEE83329.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|1354517|gb|AAB65822.1| carbonic anhydrase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|1354515|gb|AAC49785.1| carbonic anhydrase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|112292669|gb|ABI14813.1| chloroplast carbonic anhydrase [Pachysandra terminalis] Back     alignment and taxonomy information
>gi|20502881|gb|AAM22683.1|AF482951_1 carbonic anhydrase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|147821810|emb|CAN61667.1| hypothetical protein VITISV_037833 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query285
TAIR|locus:2084198347 CA1 "carbonic anhydrase 1" [Ar 0.428 0.351 0.803 2.7e-86
TAIR|locus:2185460331 CA2 "carbonic anhydrase 2" [Ar 0.428 0.368 0.786 1.1e-70
TAIR|locus:2016109280 BCA4 "beta carbonic anhydrase 0.414 0.421 0.613 1.3e-51
TAIR|locus:2034797258 BCA3 "beta carbonic anhydrase 0.421 0.465 0.553 2e-49
TAIR|locus:2134218302 BCA5 "beta carbonic anhydrase 0.4 0.377 0.443 2.8e-27
TAIR|locus:2196292290 BCA6 "beta carbonic anhydrase 0.385 0.379 0.372 2.9e-22
TIGR_CMR|GSU_2307211 GSU_2307 "carbonic anhydrase" 0.361 0.488 0.403 1.9e-19
UNIPROTKB|P0ABE9219 cynT "carbonic anhydrase monom 0.343 0.447 0.327 1.9e-09
TIGR_CMR|CJE_0288211 CJE_0288 "carbonic anhydrase" 0.375 0.507 0.347 8e-08
TIGR_CMR|GSU_0067215 GSU_0067 "carbonic anhydrase" 0.361 0.479 0.300 8.6e-08
TAIR|locus:2084198 CA1 "carbonic anhydrase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 511 (184.9 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
 Identities = 98/122 (80%), Positives = 105/122 (86%)

Query:   164 LHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFG 223
             LHLKV NIVVIGHSACGGIKGLMSF  DGNNSTDFIEDWVKI +PAKSKV++E GD  F 
Sbjct:   215 LHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFE 274

Query:   224 DQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPL 283
             DQC  CE+EAVNVSL+NLLTYPFVREGLV  TLALKGGYYDFV G+FELWGL+F LS   
Sbjct:   275 DQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEFGLSETS 334

Query:   284 SV 285
             SV
Sbjct:   335 SV 336
GO:0004089 "carbonate dehydratase activity" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0015976 "carbon utilization" evidence=IEA;ISS
GO:0009579 "thylakoid" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009409 "response to cold" evidence=IEP;RCA
GO:0010319 "stromule" evidence=IDA
GO:0042742 "defense response to bacterium" evidence=IEP;RCA
GO:0016020 "membrane" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IDA
GO:0010037 "response to carbon dioxide" evidence=IGI
GO:0010119 "regulation of stomatal movement" evidence=IGI
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006098 "pentose-phosphate shunt" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009814 "defense response, incompatible interaction" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
TAIR|locus:2185460 CA2 "carbonic anhydrase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016109 BCA4 "beta carbonic anhydrase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034797 BCA3 "beta carbonic anhydrase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134218 BCA5 "beta carbonic anhydrase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196292 BCA6 "beta carbonic anhydrase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2307 GSU_2307 "carbonic anhydrase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|P0ABE9 cynT "carbonic anhydrase monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0288 CJE_0288 "carbonic anhydrase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0067 GSU_0067 "carbonic anhydrase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P27140CAHC_ARATH4, ., 2, ., 1, ., 10.63790.99640.8184yesno
P27141CAHC_TOBAC4, ., 2, ., 1, ., 10.64300.98590.8753N/Ano
P16016CAHC_SPIOL4, ., 2, ., 1, ., 10.61940.96490.8620N/Ano
P17067CAHC_PEA4, ., 2, ., 1, ., 10.59690.99290.8628N/Ano
P46510CAHX_FLABI4, ., 2, ., 1, ., 10.59740.97540.8424N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.10.976
4th Layer4.2.1.10.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00020732001
RecName- Full=Carbonic anhydrase; EC=4.2.1.1; (324 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00020318001
SubName- Full=Putative uncharacterized protein (Chromosome chr5 scaffold_2, whole genome shotgu [...] (164 aa)
•    •• 0.917
GSVIVG00003051001
RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (814 aa)
      • 0.512
PsbP2
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (238 aa)
   •  • 0.508
GSVIVG00030064001
RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (778 aa)
      • 0.507
GSVIVG00024166001
RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (842 aa)
      • 0.506
GSVIVG00021049001
RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (760 aa)
      • 0.506

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
PLN03014347 PLN03014, PLN03014, carbonic anhydrase 1e-133
PLN03019330 PLN03019, PLN03019, carbonic anhydrase 1e-103
PLN00416258 PLN00416, PLN00416, carbonate dehydratase 6e-88
cd00884190 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) 4e-66
PLN03006301 PLN03006, PLN03006, carbonate dehydratase 4e-31
pfam00484149 pfam00484, Pro_CA, Carbonic anhydrase 2e-29
smart00947154 smart00947, Pro_CA, Carbonic anhydrase 2e-28
PLN02154290 PLN02154, PLN02154, carbonic anhydrase 7e-25
COG0288207 COG0288, CynT, Carbonic anhydrase [Inorganic ion t 1e-22
cd00382119 cd00382, beta_CA, Carbonic anhydrases (CA) are zin 5e-18
cd00883182 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) 6e-11
cd03378154 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) 1e-06
PRK11788389 PRK11788, PRK11788, tetratricopeptide repeat prote 3e-04
>gnl|CDD|178588 PLN03014, PLN03014, carbonic anhydrase Back     alignment and domain information 
 Score =  380 bits (977), Expect = e-133
 Identities = 214/336 (63%), Positives = 236/336 (70%), Gaps = 51/336 (15%)

Query: 1   MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARL------------NSPASPPSLIRNE 48
           MSTA ++ + LTS+S +QSSL K S    S VA L            +S  S P+LIRNE
Sbjct: 1   MSTAPLSGFFLTSLSPSQSSLQKLSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNE 60

Query: 49  PVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQT--P 106
           PVFAAPAPII P W E+M  ++Y+EAIEALKKLL EKE+LK VAAAKVEQITA LQT   
Sbjct: 61  PVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTS 120

Query: 107 SDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMT---------------- 150
           SD KAFD VE IK+GFI FK+EKYE NPALY ELAKGQSPKYM                 
Sbjct: 121 SDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDF 180

Query: 151 ---------------------KYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFT 189
                                KY GVGAA+EYAVLHLKV NIVVIGHSACGGIKGLMSF 
Sbjct: 181 QPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFP 240

Query: 190 FDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVRE 249
            DGNNSTDFIEDWVKI +PAKSKV++E GD  F DQC  CE+EAVNVSL+NLLTYPFVRE
Sbjct: 241 LDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVRE 300

Query: 250 GLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 285
           GLV  TLALKGGYYDFV G+FELWGL+F LS   SV
Sbjct: 301 GLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSV 336

Length = 347
>gnl|CDD|166660 PLN03019, PLN03019, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|177809 PLN00416, PLN00416, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|238449 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|178583 PLN03006, PLN03006, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|215941 pfam00484, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|214929 smart00947, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|215111 PLN02154, PLN02154, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|223365 COG0288, CynT, Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|238224 cd00382, beta_CA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|238448 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|239473 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|236983 PRK11788, PRK11788, tetratricopeptide repeat protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 285
PLN03014347 carbonic anhydrase 100.0
PLN03019330 carbonic anhydrase 100.0
PLN00416258 carbonate dehydratase 100.0
PLN03006301 carbonate dehydratase 100.0
KOG1578276 consensus Predicted carbonic anhydrase involved in 100.0
PLN02154290 carbonic anhydrase 100.0
PRK10437220 carbonic anhydrase; Provisional 100.0
PRK15219245 carbonic anhydrase; Provisional 100.0
cd00884190 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-c 100.0
cd00883182 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-c 100.0
COG0288207 CynT Carbonic anhydrase [Inorganic ion transport a 100.0
cd03378154 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-c 99.97
PF00484153 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Ca 99.94
cd00382119 beta_CA Carbonic anhydrases (CA) are zinc-containi 99.91
cd03379142 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-c 99.85
>PLN03014 carbonic anhydrase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-82  Score=599.44  Aligned_cols=284  Identities=75%  Similarity=1.131  Sum_probs=259.5

Q ss_pred             CCcccccceeccccccccccccccCCCCc-eeEEeccC------------CCCCCCcccCCccccCCCCccCCchhhhhh
Q 023213            1 MSTASINNWCLTSVSQAQSSLIKSSTLRP-SIVARLNS------------PASPPSLIRNEPVFAAPAPIINPNWREDMA   67 (285)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (285)
                      |||++|||||+||++++++++++ .++|| ++||+|++            +++||+||||+||||||+|||||+|+|||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~   79 (347)
T PLN03014          1 MSTAPLSGFFLTSLSPSQSSLQK-LSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNEPVFAAPAPIIAPYWSEEMG   79 (347)
T ss_pred             CccccccceeccccCcccccccc-cccCCcceEEEeccccccccccCCCCCCCCchhhcCCccccCCCcccCchhHhhhc
Confidence            99999999999999999999977 78899 89999961            133899999999999999999999999999


Q ss_pred             hccHHHHHHHHHHHHhhhcCchhHHhHhHHHHHHhhCCC--CCCChHHHHHHHHHHHHHHHhhhccCChHHHHhhcCCCC
Q 023213           68 NQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTP--SDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQS  145 (285)
Q Consensus        68 ~~~~~~ai~~l~~ll~~~~~l~~~a~~~i~~~tael~~~--~~~tp~~~l~~L~~GN~rF~~~~~~~~p~~f~~La~GQ~  145 (285)
                      ++||||||++|+|||++|.+|+.+|++||+++|++|++.  ....+++++++|++||+||+.+.+.+++++|++|++||+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lerL~~GN~rF~~~~~~~~~~~~~~La~GQ~  159 (347)
T PLN03014         80 TEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQS  159 (347)
T ss_pred             hhhHHHHHHHHHhhcccccccchHHHHhHHHHHHHHhcccCCCCCCcCHHHHHHHHHHHHHhhccccCHHHHHhhccCCC
Confidence            999999999999999999999999999999999999863  225689999999999999999999999999999999999


Q ss_pred             CceE------------------------ccc-------------CchhHHHHHHHHhcCCceEEEeccCCcccccccccc
Q 023213          146 PKYM------------------------TKY-------------AGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSF  188 (285)
Q Consensus       146 P~~l------------------------~r~-------------~g~~aSLEYAV~~L~Vk~IVV~GHS~CGgVkAa~~~  188 (285)
                      |+++                        +|+             .++.++|||||.+|||++|||||||+||||+|+++.
T Consensus       160 P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~~~d~~~~~~v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~~~  239 (347)
T PLN03014        160 PKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSF  239 (347)
T ss_pred             CCEEEEEeccCCCCHHHHhCCCCCcEEEEeccccccCcccccccccchhHHHHHHHHhCCCEEEEeCCCCchHHHHHHhc
Confidence            9999                        233             247899999999999999999999999999999986


Q ss_pred             ccCCCCCchhHHHHHHhchhhhhhhhhhcCCCChhhhhhHHHHHHHHHHHHHHhcChHHHHHhhCCceEEEEEEEEccCC
Q 023213          189 TFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNG  268 (285)
Q Consensus       189 ~~~g~~~~~~I~~wl~~i~pa~~~~~~~~~~~~~~e~~~~~~~~NV~~qv~nL~~~P~I~~~v~~g~L~I~G~~YDi~tG  268 (285)
                      .+++....++|++|++.+.|++.++...+...++.++++.|+++||++|++||++||+|++++++|+|.|||||||++||
T Consensus       240 ~~~g~~~~~~I~~wl~~i~pA~~~v~~~~~~~~~~d~~~~~ekeNV~~qV~nL~t~P~V~eav~~G~L~I~G~~YDi~TG  319 (347)
T PLN03014        240 PLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKG  319 (347)
T ss_pred             cccccccchhHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCcEEEEEEEECCCc
Confidence            54444456899999999999998877666666777888889999999999999999999999999999999999999999


Q ss_pred             eEEEEeccCCCCCCCCC
Q 023213          269 SFELWGLDFSLSPPLSV  285 (285)
Q Consensus       269 ~v~~l~~~~~~~~~~~~  285 (285)
                      +|++|+.+++++|++++
T Consensus       320 ~V~~l~~~~~~~~~~~~  336 (347)
T PLN03014        320 AFELWGLEFGLSETSSV  336 (347)
T ss_pred             eEEEeccccccCCcccc
Confidence            99999999999999875

>PLN03019 carbonic anhydrase Back     alignment and domain information
>PLN00416 carbonate dehydratase Back     alignment and domain information
>PLN03006 carbonate dehydratase Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02154 carbonic anhydrase Back     alignment and domain information
>PRK10437 carbonic anhydrase; Provisional Back     alignment and domain information
>PRK15219 carbonic anhydrase; Provisional Back     alignment and domain information
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4 Back     alignment and domain information
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
1ekj_A221 The X-Ray Crystallographic Structure Of Beta Carbon 1e-67
>pdb|1EKJ|A Chain A, The X-Ray Crystallographic Structure Of Beta Carbonic Anhydrase From The C3 Dicot Pisum Sativum Length = 221 Back     alignment and structure 
Iteration: 1

 Score =  253 bits (645), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 127/210 (60%), Positives = 141/210 (67%), Gaps = 37/210 (17%)
Query: 113 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMT---------------------- 150
           ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +M                       
Sbjct: 12  EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 71
Query: 151 ---------------KXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNS 195
                          K            LHLKVSNIVVIGHSACGGIKGL+SF FDG  S
Sbjct: 72  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS 131
Query: 196 TDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKT 255
           TDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFVREGLVNKT
Sbjct: 132 TDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKT 191
Query: 256 LALKGGYYDFVNGSFELWGLDFSLSPPLSV 285
           LALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 192 LALKGGYYDFVKGSFELWGLEFGLSSTFSV 221

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
1ekj_A221 Beta-carbonic anhydrase; rossman fold domain, stra 4e-67
3eyx_A216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 1e-51
3qy1_A223 Carbonic anhydrase; structural genomics, center fo 2e-50
3ucj_A227 Carbonic anhydrase; alpha/beta, strand exchange, l 4e-49
2w3q_A243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 2e-48
3e3i_A229 Carbonic anhydrase 2, beta carbonic anhydrase; all 4e-48
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 4e-46
1ddz_A496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 2e-44
1ym3_A215 Carbonic anhydrase (carbonate dehydratase) (carbo 8e-40
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 1e-15
3teo_A204 Carbon disulfide hydrolase; beta carbonic anhydras 1e-10
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 2e-08
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 3e-07
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Length = 221 Back     alignment and structure
 Score =  207 bits (528), Expect = 4e-67
 Identities = 137/218 (62%), Positives = 153/218 (70%), Gaps = 37/218 (16%)

Query: 105 TPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYM--------------- 149
           +       ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +M               
Sbjct: 4   SSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVL 63

Query: 150 ----------------------TKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMS 187
                                  KYAG GAA+EYAVLHLKVSNIVVIGHSACGGIKGL+S
Sbjct: 64  DFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLS 123

Query: 188 FTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFV 247
           F FDG  STDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFV
Sbjct: 124 FPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFV 183

Query: 248 REGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 285
           REGLVNKTLALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 184 REGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 221
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Length = 216 Back     alignment and structure
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Length = 223 Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Length = 227 Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Length = 243 Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Length = 229 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Length = 215 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Length = 170 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Length = 204 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Length = 172 Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} Length = 166 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query285
1ekj_A221 Beta-carbonic anhydrase; rossman fold domain, stra 100.0
3qy1_A223 Carbonic anhydrase; structural genomics, center fo 100.0
1ym3_A215 Carbonic anhydrase (carbonate dehydratase) (carbo 100.0
3eyx_A216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 100.0
3e3i_A229 Carbonic anhydrase 2, beta carbonic anhydrase; all 100.0
3ucj_A227 Carbonic anhydrase; alpha/beta, strand exchange, l 100.0
2w3q_A243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 100.0
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 100.0
1ddz_A496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 100.0
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 99.96
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 99.96
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 99.95
3teo_A204 Carbon disulfide hydrolase; beta carbonic anhydras 99.9
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Back     alignment and structure
Probab=100.00  E-value=6.2e-44  Score=320.45  Aligned_cols=177  Identities=76%  Similarity=1.269  Sum_probs=155.3

Q ss_pred             CChHHHHHHHHHHHHHHHhhhccCChHHHHhhcCCCCCceE------------------------cccC-----------
Q 023213          109 TKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYM------------------------TKYA-----------  153 (285)
Q Consensus       109 ~tp~~~l~~L~~GN~rF~~~~~~~~p~~f~~La~GQ~P~~l------------------------~r~~-----------  153 (285)
                      .+|++++++|++||+||+++++.+++++|++|++||+|+++                        +|++           
T Consensus         8 ~~p~~~l~~L~~gN~~f~~~~~~~~~~~~~~La~gQ~P~~lvi~CsDSRV~pe~i~~~~pGdlFVvRNaGN~V~~~d~~~   87 (221)
T 1ekj_A            8 IPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAK   87 (221)
T ss_dssp             ----CHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTTT
T ss_pred             CCHHHHHHHHHHHHHHHHhcCcccCHHHHHhhccCCCCcEEEEEeCCCCCCHHHHhCCCCCcEEEEeccCcccCcccccc
Confidence            68899999999999999999998899999999999999999                        3433           


Q ss_pred             --chhHHHHHHHHhcCCceEEEeccCCccccccccccccCCCCCchhHHHHHHhchhhhhhhhhhcCCCChhhhhhHHHH
Q 023213          154 --GVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEK  231 (285)
Q Consensus       154 --g~~aSLEYAV~~L~Vk~IVV~GHS~CGgVkAa~~~~~~g~~~~~~I~~wl~~i~pa~~~~~~~~~~~~~~e~~~~~~~  231 (285)
                        ++++||||||.+|||++|||||||+||||+|+++..+.+....++++.|++.+.|++..+.......++.++++.+++
T Consensus        88 ~~~~~asleyAv~~L~v~~IvV~GHs~CGav~Aa~~~~~~~~~~~~~i~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (221)
T 1ekj_A           88 YAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEK  167 (221)
T ss_dssp             CHHHHHHHHHHHHTSCCSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHhcCCCEEEEEccCCCCceeeecccccccccchHHHHHHHHhhhhHHHHHHhhccCCCHHHHHHHHHH
Confidence              356899999999999999999999999999999866555445689999999999988766555555566667788899


Q ss_pred             HHHHHHHHHHhcChHHHHHhhCCceEEEEEEEEccCCeEEEEeccCCCCCCCCC
Q 023213          232 EAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV  285 (285)
Q Consensus       232 ~NV~~qv~nL~~~P~I~~~v~~g~L~I~G~~YDi~tG~v~~l~~~~~~~~~~~~  285 (285)
                      +||+.|+++|++||+|+++|++|+|.||||+||++||+|++++++.+.+|+++|
T Consensus       168 ~nV~~~v~~L~~~p~v~~~~~~g~l~v~G~~ydi~tG~v~~~~~~~~~~~~~~~  221 (221)
T 1ekj_A          168 EAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV  221 (221)
T ss_dssp             HHHHHHHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCCC
T ss_pred             HHHHHHHHHHHhCHHHHHHHHcCCcEEEEEEEECCCCeEEEEecCCCCCccccC
Confidence            999999999999999999999999999999999999999999999999999986
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} SCOP: c.53.2.1 PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Back     alignment and structure
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Back     alignment and structure
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} SCOP: c.53.2.1 PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} SCOP: c.53.2.0 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 285
d1ekja_210 c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum 1e-45
d1ddza2239 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red 1e-33
d1i6pa_214 c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia 2e-26
d1ddza1242 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red a 8e-25
d1g5ca_169 c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Me 8e-15
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Length = 210 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

 Score =  151 bits (381), Expect = 1e-45
 Identities = 137/210 (65%), Positives = 152/210 (72%), Gaps = 37/210 (17%)

Query: 113 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYM----------------------- 149
           ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +M                       
Sbjct: 1   EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 60

Query: 150 --------------TKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNS 195
                          KYAG GAA+EYAVLHLKVSNIVVIGHSACGGIKGL+SF FDG  S
Sbjct: 61  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS 120

Query: 196 TDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKT 255
           TDFIE+WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFVREGLVNKT
Sbjct: 121 TDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKT 180

Query: 256 LALKGGYYDFVNGSFELWGLDFSLSPPLSV 285
           LALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 181 LALKGGYYDFVKGSFELWGLEFGLSSTFSV 210
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 239 Back     information, alignment and structure
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Length = 214 Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 242 Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 169 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query285
d1ekja_210 beta-carbonic anhydrase {Pea (Pisum sativum) [TaxI 100.0
d1ddza2239 beta-carbonic anhydrase {Red alga (Porphyridium pu 100.0
d1i6pa_214 beta-carbonic anhydrase {Escherichia coli [TaxId: 100.0
d1ddza1242 beta-carbonic anhydrase {Red alga (Porphyridium pu 100.0
d1g5ca_169 beta-carbonic anhydrase {Archaeon Methanobacterium 99.95
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=2e-43  Score=311.57  Aligned_cols=173  Identities=77%  Similarity=1.307  Sum_probs=158.0

Q ss_pred             HHHHHHHHHHHHHHhhhccCChHHHHhhcCCCCCceE------------------------cccC-------------ch
Q 023213          113 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYM------------------------TKYA-------------GV  155 (285)
Q Consensus       113 ~~l~~L~~GN~rF~~~~~~~~p~~f~~La~GQ~P~~l------------------------~r~~-------------g~  155 (285)
                      +++++|++||+||+++++.+++++|++|++||+|+++                        +|++             ++
T Consensus         1 ~a~e~l~~G~~~f~~~~~~~~~~~~~~l~~gQ~P~~~vi~C~DSRv~~e~if~~~~GdlfvvRnaGn~v~~~~~~~~~~~   80 (210)
T d1ekja_           1 EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGT   80 (210)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTTTCHHH
T ss_pred             ChHHHHHHHHHHHHhCccccCHHHHHHHhcCCCCceEEEeccccCCChhhhccCCCCcEEEEeccCCccCccccccchhh
Confidence            3689999999999999999999999999999999999                        3432             36


Q ss_pred             hHHHHHHHHhcCCceEEEeccCCccccccccccccCCCCCchhHHHHHHhchhhhhhhhhhcCCCChhhhhhHHHHHHHH
Q 023213          156 GAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVN  235 (285)
Q Consensus       156 ~aSLEYAV~~L~Vk~IVV~GHS~CGgVkAa~~~~~~g~~~~~~I~~wl~~i~pa~~~~~~~~~~~~~~e~~~~~~~~NV~  235 (285)
                      .+||||||.+|||++|||||||+||||+|+++....+....++++.|++.+.++.........+...+++.+.+++.||+
T Consensus        81 ~~sleyav~~l~v~~IVVlGHt~CGav~Aa~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~nV~  160 (210)
T d1ekja_          81 GAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVN  160 (210)
T ss_dssp             HHHHHHHHHTSCCSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhhcCCceEEEEEcCcchHHHHHhhhhhhccCccCchHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Confidence            79999999999999999999999999999998776666667899999999999998877766666777778889999999


Q ss_pred             HHHHHHhcChHHHHHhhCCceEEEEEEEEccCCeEEEEeccCCCCCCCCC
Q 023213          236 VSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV  285 (285)
Q Consensus       236 ~qv~nL~~~P~I~~~v~~g~L~I~G~~YDi~tG~v~~l~~~~~~~~~~~~  285 (285)
                      .|+++|++||+|++++++|+|.||||+||++||+|+++++++..++++++
T Consensus       161 ~~v~~L~~~p~I~~~v~~g~l~I~G~vYDi~tG~v~~~~~~~g~~~~~~~  210 (210)
T d1ekja_         161 ASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV  210 (210)
T ss_dssp             HHHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCCC
T ss_pred             HHHHHHHcCHHHHHHHHcCCeEEEEEEEECCCcEEEEEeccCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999986
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure