Citrus Sinensis ID: 023261

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSHTHSQY
cccccccHHHHHHHHHHHHHHccccccEEEEEEEccccHHHHHHHHHHHHHHcccEEEEEEEccHHHHccccccccccccccHHHHHHHHHHHHHcccccEEEEEcccEEEEcccHHHHcccccccEEEEEEEccccccccccccccccHHHHHHHcccccccccccccHHccHHHHHHHcHHHHHHHHHHHHccccccccccHHHHHHHHcccEEEcccccccccccccccccHHHcccccccEEEEEcccccccccccccccccccccccccccccccccccc
ccccHHHHHHHHHHHHHHHHcccccccEEEEEEEccccHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEcccEEEEccHHHHHccccccccEEcccHHHcccccccccccccccHHHHHHccccccccEcccEEEEEHHHHHHcccHHHHHHHHHHHHccEEEEccccccEEEEEccccccccccHcEcccccccccccccccccccEEEEEEccccccEEEcccccccccHHHEcccccccccccccc
mtldpeylRGTIAAVHSVLkhtscpenvfFHFIaaesspantnDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRviyldsdvivvddiqklwriplsggrtigapeychanftkyfsdefwsdrefsrvfegkrpcyfntgVMVMDLVRWREGDYTRKIEKWMRIQKERRIyelgslppfllvfggdveaidhrwnqhglgghnvenscrnlhagpvslmhwsgkgkpwvrldakkpcpvdylwapydlynshthsqy
MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVfegkrpcyfntgvmvmdlvrwregdytrkIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYnshthsqy
MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSHTHSQY
******YLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYN*******
MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDL*********
MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSHTHSQY
MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSHTHSQ*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSHTHSQY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query285 2.2.26 [Sep-21-2011]
Q9LHD2365 Probable galacturonosyltr yes no 0.971 0.758 0.758 1e-129
O04536390 Probable galacturonosyltr no no 0.971 0.710 0.732 1e-124
O48684393 Probable galacturonosyltr no no 0.971 0.704 0.722 1e-121
O04253346 Probable galacturonosyltr no no 0.971 0.800 0.673 1e-113
Q8VYF4361 Probable galacturonosyltr no no 0.961 0.759 0.676 1e-112
Q9M8J2351 Probable galacturonosyltr no no 0.978 0.794 0.639 1e-111
Q9FWY9361 Probable galacturonosyltr no no 0.968 0.764 0.650 1e-109
Q0V7R1345 Probable galacturonosyltr no no 0.957 0.791 0.642 1e-100
Q9S7G2341 Probable galacturonosyltr no no 0.964 0.806 0.595 7e-99
Q9LN68351 Probable galacturonosyltr no no 0.971 0.789 0.620 3e-97
>sp|Q9LHD2|GATLA_ARATH Probable galacturonosyltransferase-like 10 OS=Arabidopsis thaliana GN=GATL10 PE=2 SV=1 Back     alignment and function desciption
 Score =  460 bits (1183), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 213/281 (75%), Positives = 243/281 (86%), Gaps = 4/281 (1%)

Query: 1   MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQV 60
           MTLDP YLRGT++AVHS+LKHTSCPEN+FFHFIA+ +S  +   LA+T+ S FP LSF+V
Sbjct: 75  MTLDPAYLRGTVSAVHSILKHTSCPENIFFHFIASGTSQGS---LAKTLSSVFPSLSFKV 131

Query: 61  YLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWR 120
           Y F E  V  LISSSIR+ALDSPLNYAR YL++IL   + RVIYLDSDVIVVDDIQKLW+
Sbjct: 132 YTFEETTVKNLISSSIRQALDSPLNYARSYLSEILSSCVSRVIYLDSDVIVVDDIQKLWK 191

Query: 121 IPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREG 180
           I LSG RTIGAPEYCHANFTKYF+D FWSD++ S VF+ K PCYFNTGVMV+DL RWREG
Sbjct: 192 ISLSGSRTIGAPEYCHANFTKYFTDSFWSDQKLSSVFDSKTPCYFNTGVMVIDLERWREG 251

Query: 181 DYTRKIEKWMRIQKE-RRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNL 239
           DYTRKIE WM+IQKE +RIYELGSLPPFLLVFGGD+EAIDH+WNQHGLGG N+ +SCR+L
Sbjct: 252 DYTRKIENWMKIQKEDKRIYELGSLPPFLLVFGGDIEAIDHQWNQHGLGGDNIVSSCRSL 311

Query: 240 HAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSH 280
           H GPVSL+HWSGKGKPWVRLD  KPCP+DYLWAPYDL+ S 
Sbjct: 312 HPGPVSLIHWSGKGKPWVRLDDGKPCPIDYLWAPYDLHKSQ 352
May be involved in pectin and/or xylans biosynthesis in cell walls.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|O04536|GATL9_ARATH Probable galacturonosyltransferase-like 9 OS=Arabidopsis thaliana GN=GATL9 PE=2 SV=1 Back     alignment and function description
>sp|O48684|GATL8_ARATH Probable galacturonosyltransferase-like 8 OS=Arabidopsis thaliana GN=GATL8 PE=2 SV=1 Back     alignment and function description
>sp|O04253|GATL6_ARATH Probable galacturonosyltransferase-like 6 OS=Arabidopsis thaliana GN=GATL6 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYF4|GATL7_ARATH Probable galacturonosyltransferase-like 7 OS=Arabidopsis thaliana GN=GATL7 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8J2|GATL4_ARATH Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana GN=GATL4 PE=2 SV=1 Back     alignment and function description
>sp|Q9FWY9|GATL5_ARATH Probable galacturonosyltransferase-like 5 OS=Arabidopsis thaliana GN=GATL5 PE=2 SV=1 Back     alignment and function description
>sp|Q0V7R1|GATL3_ARATH Probable galacturonosyltransferase-like 3 OS=Arabidopsis thaliana GN=GATL3 PE=2 SV=1 Back     alignment and function description
>sp|Q9S7G2|GATL2_ARATH Probable galacturonosyltransferase-like 2 OS=Arabidopsis thaliana GN=GATL2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LN68|GATL1_ARATH Probable galacturonosyltransferase-like 1 OS=Arabidopsis thaliana GN=GATL1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query285
255552756361 transferase, transferring glycosyl group 1.0 0.789 0.757 1e-133
30689156365 putative galacturonosyltransferase-like 0.971 0.758 0.758 1e-127
297818430364 hypothetical protein ARALYDRAFT_905093 [ 0.971 0.760 0.754 1e-126
332071125362 glycosyltransferase [Panax notoginseng] 0.992 0.781 0.759 1e-125
225424803 386 PREDICTED: probable galacturonosyltransf 0.982 0.725 0.735 1e-123
18409445 390 putative galacturonosyltransferase-like 0.971 0.710 0.732 1e-122
224100379383 glycosyltransferase, CAZy family GT8 [Po 0.971 0.723 0.741 1e-122
297838789384 hypothetical protein ARALYDRAFT_476133 [ 0.971 0.721 0.729 1e-121
297850896 389 hypothetical protein ARALYDRAFT_472678 [ 0.971 0.712 0.722 1e-120
12003394353 Avr9/Cf-9 rapidly elicited protein 231 [ 0.982 0.793 0.719 1e-120
>gi|255552756|ref|XP_002517421.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223543432|gb|EEF44963.1| transferase, transferring glycosyl groups, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  478 bits (1231), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 216/285 (75%), Positives = 248/285 (87%)

Query: 1   MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQV 60
           MTLDPEYLRGT+AA+HSV+KH SCPEN+FFH IA+ S   +  DL + V+SAFP LSF+V
Sbjct: 71  MTLDPEYLRGTVAAIHSVVKHASCPENIFFHLIASSSGKISPGDLTKIVKSAFPSLSFKV 130

Query: 61  YLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWR 120
           Y+F E  V GLIS+SIRRALD+PLNYAR YLADILEP +KRVIYLDSDVIVVDDIQ LWR
Sbjct: 131 YVFNENLVDGLISTSIRRALDNPLNYARSYLADILEPCVKRVIYLDSDVIVVDDIQNLWR 190

Query: 121 IPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREG 180
           +PL+G R IGAPEYCHANFTKYF+DEFWSDRE S +F GK  CYFNTGVM+MDL RWREG
Sbjct: 191 VPLTGSRIIGAPEYCHANFTKYFTDEFWSDRELSGIFAGKTACYFNTGVMIMDLARWREG 250

Query: 181 DYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLH 240
           +YT++IEKWMRIQKERRIY+LGSLPPFLLVFGGDVE I HRWNQHGLGG NV ++CR+LH
Sbjct: 251 EYTKEIEKWMRIQKERRIYDLGSLPPFLLVFGGDVEGIHHRWNQHGLGGDNVVSNCRSLH 310

Query: 241 AGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSHTHSQY 285
            GPVSL+HWSGKGKPW RLD +KPCP+D LWAPYDL+  H+H ++
Sbjct: 311 PGPVSLLHWSGKGKPWRRLDERKPCPIDSLWAPYDLHKHHSHPRH 355

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|30689156|ref|NP_189474.2| putative galacturonosyltransferase-like 10 [Arabidopsis thaliana] gi|75273232|sp|Q9LHD2.1|GATLA_ARATH RecName: Full=Probable galacturonosyltransferase-like 10; AltName: Full=Galactinol synthase 8; Short=AtGolS8; Short=GolS-8 gi|11994580|dbj|BAB02626.1| glycosyl transferase-like protein [Arabidopsis thaliana] gi|44917577|gb|AAS49113.1| At3g28340 [Arabidopsis thaliana] gi|51971391|dbj|BAD44360.1| unknown protein [Arabidopsis thaliana] gi|332643914|gb|AEE77435.1| putative galacturonosyltransferase-like 10 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297818430|ref|XP_002877098.1| hypothetical protein ARALYDRAFT_905093 [Arabidopsis lyrata subsp. lyrata] gi|297322936|gb|EFH53357.1| hypothetical protein ARALYDRAFT_905093 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|332071125|gb|AED99881.1| glycosyltransferase [Panax notoginseng] Back     alignment and taxonomy information
>gi|225424803|ref|XP_002271160.1| PREDICTED: probable galacturonosyltransferase-like 9-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|18409445|ref|NP_564983.1| putative galacturonosyltransferase-like 9 [Arabidopsis thaliana] gi|186494322|ref|NP_001117576.1| putative galacturonosyltransferase-like 9 [Arabidopsis thaliana] gi|75097066|sp|O04536.1|GATL9_ARATH RecName: Full=Probable galacturonosyltransferase-like 9; AltName: Full=Like glycosyl transferase 8 gi|13878003|gb|AAK44079.1|AF370264_1 unknown protein [Arabidopsis thaliana] gi|2194142|gb|AAB61117.1| ESTs gb|N38288,gb|T43486,gb|AA395242 come from this gene [Arabidopsis thaliana] gi|17104733|gb|AAL34255.1| unknown protein [Arabidopsis thaliana] gi|332196894|gb|AEE35015.1| putative galacturonosyltransferase-like 9 [Arabidopsis thaliana] gi|332196895|gb|AEE35016.1| putative galacturonosyltransferase-like 9 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224100379|ref|XP_002311853.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi|222851673|gb|EEE89220.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297838789|ref|XP_002887276.1| hypothetical protein ARALYDRAFT_476133 [Arabidopsis lyrata subsp. lyrata] gi|297333117|gb|EFH63535.1| hypothetical protein ARALYDRAFT_476133 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297850896|ref|XP_002893329.1| hypothetical protein ARALYDRAFT_472678 [Arabidopsis lyrata subsp. lyrata] gi|297339171|gb|EFH69588.1| hypothetical protein ARALYDRAFT_472678 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|12003394|gb|AAG43554.1|AF211536_1 Avr9/Cf-9 rapidly elicited protein 231 [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query285
TAIR|locus:2095420365 GATL10 "galacturonosyltransfer 0.989 0.772 0.749 8.5e-120
TAIR|locus:2020638390 LGT8 "glucosyl transferase fam 0.971 0.710 0.732 2.4e-115
TAIR|locus:2032357393 LGT9 [Arabidopsis thaliana (ta 0.971 0.704 0.722 3.2e-113
TAIR|locus:2132218346 GATL6 "galacturonosyltransfera 0.971 0.800 0.673 9.2e-107
TAIR|locus:2081670361 GATL7 "galacturonosyltransfera 0.961 0.759 0.676 5.1e-106
TAIR|locus:2082450351 GATL4 "galacturonosyltransfera 0.978 0.794 0.639 4.6e-105
TAIR|locus:2024740361 GATL5 "galacturonosyltransfera 0.968 0.764 0.650 6e-103
TAIR|locus:2205314345 GATL3 "galacturonosyltransfera 0.957 0.791 0.642 7.9e-101
TAIR|locus:2016432351 PARVUS "AT1G19300" [Arabidopsi 0.961 0.780 0.630 6.6e-97
TAIR|locus:2101724341 GATL2 "galacturonosyltransfera 0.964 0.806 0.595 1e-91
TAIR|locus:2095420 GATL10 "galacturonosyltransferase-like 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
 Identities = 215/287 (74%), Positives = 246/287 (85%)

Query:     1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQV 60
             MTLDP YLRGT++AVHS+LKHTSCPEN+FFHFIA+ +S  +   LA+T+ S FP LSF+V
Sbjct:    75 MTLDPAYLRGTVSAVHSILKHTSCPENIFFHFIASGTSQGS---LAKTLSSVFPSLSFKV 131

Query:    61 YLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWR 120
             Y F E  V  LISSSIR+ALDSPLNYAR YL++IL   + RVIYLDSDVIVVDDIQKLW+
Sbjct:   132 YTFEETTVKNLISSSIRQALDSPLNYARSYLSEILSSCVSRVIYLDSDVIVVDDIQKLWK 191

Query:   121 IPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREG 180
             I LSG RTIGAPEYCHANFTKYF+D FWSD++ S VF+ K PCYFNTGVMV+DL RWREG
Sbjct:   192 ISLSGSRTIGAPEYCHANFTKYFTDSFWSDQKLSSVFDSKTPCYFNTGVMVIDLERWREG 251

Query:   181 DYTRKIEKWMRIQKE-RRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNL 239
             DYTRKIE WM+IQKE +RIYELGSLPPFLLVFGGD+EAIDH+WNQHGLGG N+ +SCR+L
Sbjct:   252 DYTRKIENWMKIQKEDKRIYELGSLPPFLLVFGGDIEAIDHQWNQHGLGGDNIVSSCRSL 311

Query:   240 HAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSHT-HSQY 285
             H GPVSL+HWSGKGKPWVRLD  KPCP+DYLWAPYDL+ S   + QY
Sbjct:   312 HPGPVSLIHWSGKGKPWVRLDDGKPCPIDYLWAPYDLHKSQRQYLQY 358
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016051 "carbohydrate biosynthetic process" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0047262 "polygalacturonate 4-alpha-galacturonosyltransferase activity" evidence=ISS
GO:0006979 "response to oxidative stress" evidence=IEP
GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0035556 "intracellular signal transduction" evidence=RCA
TAIR|locus:2020638 LGT8 "glucosyl transferase family 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032357 LGT9 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132218 GATL6 "galacturonosyltransferase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081670 GATL7 "galacturonosyltransferase-like 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082450 GATL4 "galacturonosyltransferase-like 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024740 GATL5 "galacturonosyltransferase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205314 GATL3 "galacturonosyltransferase-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016432 PARVUS "AT1G19300" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101724 GATL2 "galacturonosyltransferase-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LHD2GATLA_ARATH2, ., 4, ., 1, ., -0.75800.97190.7589yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GATL10
GATL10 (Galacturonosyltransferase-like 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring hexosyl groups; Encodes a protein with putative galacturonosyltransferase activity. (365 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
RFS5
SIP1 (seed imbibition 1-like); galactinol-sucrose galactosyltransferase/ hydrolase, hydrolyzing [...] (783 aa)
      • 0.885
AT5G30500
galactinol synthase, putative; galactinol synthase, putative; FUNCTIONS IN- transferase activit [...] (328 aa)
      • 0.821
DIC2
mitochondrial substrate carrier family protein; mitochondrial substrate carrier family protein; [...] (313 aa)
   •    0.819
AT4G29780
unknown protein; unknown protein; LOCATED IN- cellular_component unknown; EXPRESSED IN- 22 plan [...] (540 aa)
   •    0.812
AT5G47140
zinc finger (GATA type) family protein; zinc finger (GATA type) family protein; FUNCTIONS IN- t [...] (470 aa)
      • 0.790
AT2G28340
zinc finger (GATA type) family protein; zinc finger (GATA type) family protein; FUNCTIONS IN- t [...] (315 aa)
      • 0.790
BAP1
BAP1 (BON ASSOCIATION PROTEIN 1); phospholipid binding / protein binding; Encodes a protein wit [...] (192 aa)
   •    0.788
AT3G57450
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (96 aa)
   •    0.786
WRKY40
WRKY40; transcription factor; Pathogen-induced transcription factor. Binds W-box sequences in v [...] (302 aa)
   •    0.780
AT3G02840
immediate-early fungal elicitor family protein; immediate-early fungal elicitor family protein; [...] (379 aa)
   •    0.768

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
pfam01501248 pfam01501, Glyco_transf_8, Glycosyl transferase fa 7e-68
cd06429257 cd06429, GT8_like_1, GT8_like_1 represents a subfa 1e-32
cd04194248 cd04194, GT8_A4GalT_like, A4GalT_like proteins cat 5e-29
cd00505246 cd00505, Glyco_transf_8, Members of glycosyltransf 1e-27
PLN02742534 PLN02742, PLN02742, Probable galacturonosyltransfe 4e-23
PLN02870533 PLN02870, PLN02870, Probable galacturonosyltransfe 2e-22
PLN02829639 PLN02829, PLN02829, Probable galacturonosyltransfe 2e-22
PLN02659534 PLN02659, PLN02659, Probable galacturonosyltransfe 6e-22
PLN02867535 PLN02867, PLN02867, Probable galacturonosyltransfe 4e-21
PLN02718603 PLN02718, PLN02718, Probable galacturonosyltransfe 3e-20
PLN02910657 PLN02910, PLN02910, polygalacturonate 4-alpha-gala 1e-19
PLN02523559 PLN02523, PLN02523, galacturonosyltransferase 3e-19
PLN02769629 PLN02769, PLN02769, Probable galacturonosyltransfe 1e-16
COG1442325 COG1442, RfaJ, Lipopolysaccharide biosynthesis pro 6e-15
cd06431280 cd06431, GT8_LARGE_C, LARGE catalytic domain has c 1e-05
cd06432248 cd06432, GT8_HUGT1_C_like, The C-terminal domain o 7e-05
cd02537240 cd02537, GT8_Glycogenin, Glycogenin belongs the GT 0.001
PRK15171334 PRK15171, PRK15171, lipopolysaccharide 1,3-galacto 0.002
>gnl|CDD|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8 Back     alignment and domain information 
 Score =  211 bits (538), Expect = 7e-68
 Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 15/260 (5%)

Query: 1   MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQV 60
           + LD  Y+ G    + S+L H S P ++ FH +  + S  N   L             + 
Sbjct: 4   LALDDNYVLGAGVLIKSLLLHNSDPLHLLFHILTDDVSEENREKLNALGSQVSEVDVLEF 63

Query: 61  YLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWR 120
                + ++ L    + +   S LNYAR+YLAD+  P   +++YLD+D+IV+ D+ +L+ 
Sbjct: 64  --SDIEMLSYLTLQLLLKKYWSLLNYARLYLADLF-PKYDKILYLDADIIVLGDLDELFD 120

Query: 121 IPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREG 180
           I L GG+   A E              W     S       PCYFN GV+V++L +WRE 
Sbjct: 121 IDL-GGKVAAAVEDF--------DRYPWFKEALSAELGIPPPCYFNAGVLVINLKKWREE 171

Query: 181 DYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLH 240
           + T K+ +W+   K   + +LG      +VF G V+ +  R+N HGLG ++     R L 
Sbjct: 172 NLTEKLIEWLN--KNGGLLKLGDQDILNIVFKGKVKPLPPRYNVHGLGYYS-YKKRRKLI 228

Query: 241 AGPVSLMHWSGKGKPWVRLD 260
                ++H+ G  KPW  L 
Sbjct: 229 PENPKVIHYIGPTKPWHDLA 248

This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. Length = 248
>gnl|CDD|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>gnl|CDD|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>gnl|CDD|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>gnl|CDD|215395 PLN02742, PLN02742, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215468 PLN02870, PLN02870, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215443 PLN02829, PLN02829, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215356 PLN02659, PLN02659, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|178458 PLN02867, PLN02867, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|178320 PLN02718, PLN02718, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215286 PLN02523, PLN02523, galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215412 PLN02769, PLN02769, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|133053 cd06431, GT8_LARGE_C, LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis Back     alignment and domain information
>gnl|CDD|133054 cd06432, GT8_HUGT1_C_like, The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family Back     alignment and domain information
>gnl|CDD|133018 cd02537, GT8_Glycogenin, Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information
>gnl|CDD|185093 PRK15171, PRK15171, lipopolysaccharide 1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 285
PRK15171334 lipopolysaccharide 1,3-galactosyltransferase; Prov 100.0
cd06429257 GT8_like_1 GT8_like_1 represents a subfamily of GT 100.0
cd06431280 GT8_LARGE_C LARGE catalytic domain has closest hom 100.0
PLN02718603 Probable galacturonosyltransferase 100.0
PLN02523559 galacturonosyltransferase 100.0
COG1442325 RfaJ Lipopolysaccharide biosynthesis proteins, LPS 100.0
cd00505246 Glyco_transf_8 Members of glycosyltransferase fami 100.0
PLN02742534 Probable galacturonosyltransferase 100.0
PLN02829639 Probable galacturonosyltransferase 100.0
cd04194248 GT8_A4GalT_like A4GalT_like proteins catalyze the 100.0
PLN02769629 Probable galacturonosyltransferase 100.0
PLN02870533 Probable galacturonosyltransferase 100.0
PLN02659534 Probable galacturonosyltransferase 100.0
PLN02910657 polygalacturonate 4-alpha-galacturonosyltransferas 100.0
PLN02867535 Probable galacturonosyltransferase 100.0
PF01501250 Glyco_transf_8: Glycosyl transferase family 8; Int 100.0
cd06430304 GT8_like_2 GT8_like_2 represents a subfamily of GT 100.0
cd06432248 GT8_HUGT1_C_like The C-terminal domain of HUGT1-li 100.0
cd02537240 GT8_Glycogenin Glycogenin belongs the GT 8 family 100.0
PLN00176333 galactinol synthase 100.0
cd06914278 GT8_GNT1 GNT1 is a fungal enzyme that belongs to t 99.95
KOG18791470 consensus UDP-glucose:glycoprotein glucosyltransfe 99.38
COG5597368 Alpha-N-acetylglucosamine transferase [Cell envelo 99.19
PF03407212 Nucleotid_trans: Nucleotide-diphospho-sugar transf 97.41
PF11051271 Mannosyl_trans3: Mannosyltransferase putative; Int 96.57
PLN03182429 xyloglucan 6-xylosyltransferase; Provisional 96.07
PF05637239 Glyco_transf_34: galactosyl transferase GMA12/MNN1 95.95
PLN03181453 glycosyltransferase; Provisional 90.62
cd02515271 Glyco_transf_6 Glycosyltransferase family 6 compri 89.58
KOG1950369 consensus Glycosyl transferase, family 8 - glycoge 88.55
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 88.21
PF04765305 DUF616: Protein of unknown function (DUF616); Inte 84.83
KOG1928409 consensus Alpha-1,4-N-acetylglucosaminyltransferas 82.42
PF03414337 Glyco_transf_6: Glycosyltransferase family 6; Inte 81.1
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 80.32
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-53  Score=382.96  Aligned_cols=261  Identities=20%  Similarity=0.316  Sum_probs=200.2

Q ss_pred             CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261            1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL   80 (285)
Q Consensus         1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (285)
                      ||+|++|+++++|+|+||++|+++ ..++|||+++++++++++.|+++..+ + +.++.++.+|.+.+.+.+.    ..+
T Consensus        30 ~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~-~-~~~i~~~~id~~~~~~~~~----~~~  102 (334)
T PRK15171         30 YGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQ-Y-NTRINIYLINCERLKSLPS----TKN  102 (334)
T ss_pred             EECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHh-c-CCeEEEEEeCHHHHhCCcc----cCc
Confidence            589999999999999999999864 57999999999999999999988754 3 3578888888777665533    236


Q ss_pred             cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCC
Q 023261           81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGK  160 (285)
Q Consensus        81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (285)
                      +|.++|+||++|++||++++||||||+|+||.+||++||++|++++.++||+.++...   +     |.+...+....+.
T Consensus       103 ~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~---~-----~~~~~~~l~~~~~  174 (334)
T PRK15171        103 WTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAE---W-----WSKRAQSLQTPGL  174 (334)
T ss_pred             CCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchh---H-----HHHHHHhcCCccc
Confidence            7889999999999999779999999999999999999999999977777776543211   1     1111111011111


Q ss_pred             CCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeecCccccccCCCCCcccccccccC
Q 023261          161 RPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLH  240 (285)
Q Consensus       161 ~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~  240 (285)
                      ...||||||||||+++||++++++++++++........+..+|||+||.+|.|+++.||++||++...............
T Consensus       175 ~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~  254 (334)
T PRK15171        175 ASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYELKDSVINPV  254 (334)
T ss_pred             cccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHHHHhcccccc
Confidence            34699999999999999999999999998875421122345799999999999999999999998421111111111111


Q ss_pred             CCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCC
Q 023261          241 AGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNS  279 (285)
Q Consensus       241 ~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~  279 (285)
                      ..+|+||||+|+.|||+..+.   ++++++||+|.+.+|
T Consensus       255 ~~~p~IIHy~G~~KPW~~~~~---~~~~~~f~~~~~~sp  290 (334)
T PRK15171        255 NDETVFIHYIGPTKPWHSWAD---YPVSQYFLKAKEASP  290 (334)
T ss_pred             cCCCEEEEECCCCCCCCCCCC---CchHHHHHHHHhcCC
Confidence            347899999999999987543   468899999998876

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis Back     alignment and domain information
>PLN02718 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02523 galacturonosyltransferase Back     alignment and domain information
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>PLN02742 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02829 Probable galacturonosyltransferase Back     alignment and domain information
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>PLN02769 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02870 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02659 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>PLN02867 Probable galacturonosyltransferase Back     alignment and domain information
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family Back     alignment and domain information
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information
>PLN00176 galactinol synthase Back     alignment and domain information
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family Back     alignment and domain information
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [] Back     alignment and domain information
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose Back     alignment and domain information
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional Back     alignment and domain information
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif Back     alignment and domain information
>PLN03181 glycosyltransferase; Provisional Back     alignment and domain information
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens Back     alignment and domain information
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function Back     alignment and domain information
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
1g9r_A311 Crystal Structure Of Galactosyltransferase Lgtc In 6e-07
1ss9_A311 Crystal Structural Analysis Of Active Site Mutant Q 6e-07
>pdb|1G9R|A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose Length = 311 Back     alignment and structure 
Iteration: 1

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 35/245 (14%)
Query: 28  VFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRALDSPLNYA 87
           + FH + A  S AN   +A  +R     + F + +  E F       +IR    S   YA
Sbjct: 31  IRFHVLDAGISEANRAAVAANLRGGGGNIRF-IDVNPEDFAG--FPLNIRHI--SITTYA 85
Query: 88  RIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEF 147
           R+ L + +     +V+YLD DV+V D +  LW   L G   +GA            S + 
Sbjct: 86  RLKLGEYI-ADCDKVLYLDIDVLVRDSLTPLWDTDL-GDNWLGA------------SIDL 131
Query: 148 WSDRE---FSRVFEGKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSL 204
           + +R+     ++       YFN GV++++L +WR  D  +   +W+   K+   Y+   +
Sbjct: 132 FVERQEGYKQKIGXADGEYYFNAGVLLINLKKWRRHDIFKXSSEWVEQYKDVXQYQDQDI 191
Query: 205 PPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLHAG-----------PVSLMHWSGKG 253
              L  F G V   + R+N          N   + H             PV++ H+ G  
Sbjct: 192 LNGL--FKGGVCYANSRFNFXPTNYAFXANWFASRHTDPLYRDRTNTVXPVAVSHYCGPA 249
Query: 254 KPWVR 258
           KPW R
Sbjct: 250 KPWHR 254
>pdb|1SS9|A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc Length = 311 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query285
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 5e-61
3tzt_A276 Glycosyl transferase family 8; structural genomics 9e-47
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311 Back     alignment and structure
 Score =  195 bits (496), Expect = 5e-61
 Identities = 60/269 (22%), Positives = 97/269 (36%), Gaps = 30/269 (11%)

Query: 1   MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQV 60
              D  Y      A  SV         + FH + A  S AN   +A  +R      + + 
Sbjct: 5   FAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRG--GGGNIRF 61

Query: 61  YLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWR 120
                +   G     +     S   YAR+ L + +     +V+YLD DV+V D +  LW 
Sbjct: 62  IDVNPEDFAGF---PLNIRHISITTYARLKLGEYI-ADCDKVLYLDIDVLVRDSLTPLWD 117

Query: 121 IPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREG 180
             L       + +        Y      +D E           YFN GV++++L +WR  
Sbjct: 118 TDLGDNWLGASIDLFVERQEGYKQKIGMADGE----------YYFNAGVLLINLKKWRRH 167

Query: 181 DYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLH 240
           D  +   +W+   K+   Y+   +     +F G V   + R+N        + N   + H
Sbjct: 168 DIFKMSSEWVEQYKDVMQYQDQDILNG--LFKGGVCYANSRFNFMPTNYAFMANWFASRH 225

Query: 241 AGP-----------VSLMHWSGKGKPWVR 258
             P           V++ H+ G  KPW R
Sbjct: 226 TDPLYRDRTNTVMPVAVSHYCGPAKPWHR 254
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query285
3tzt_A276 Glycosyl transferase family 8; structural genomics 100.0
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 100.0
3u2u_A263 Glycogenin-1, GN-1, GN1; structural genomics, stru 100.0
1ll2_A333 Glycogenin-1; protein-substrate complex, beta-alph 99.97
3ioh_A298 Histo-blood group ABO system transferase; GTA, cis 88.38
1o7q_A289 N-acetyllactosaminide alpha-1,3- galactosyltransfe 87.99
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0 Back     alignment and structure
Probab=100.00  E-value=1.7e-50  Score=353.85  Aligned_cols=254  Identities=17%  Similarity=0.263  Sum_probs=180.8

Q ss_pred             CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261            1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL   80 (285)
Q Consensus         1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (285)
                      ||+|++|+++++|+++||++|+++ +.++|||++++++++.++.|++++..  .+.+++++.++.+.+.+...    ..+
T Consensus        10 ~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~--~~~~i~~~~~~~~~~~~~~~----~~~   82 (276)
T 3tzt_A           10 LTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKK--FSYTLYPIRATDDLFSFAKV----TDR   82 (276)
T ss_dssp             EECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHT--TTCEEEEEECC----------------
T ss_pred             EEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHH--cCCEEEEEEeCHHHHhcCcc----ccc
Confidence            589999999999999999999985 67999999999999999999988764  24688888887655544322    236


Q ss_pred             cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccc-cccccccccccchhhhhccCC
Q 023261           81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHAN-FTKYFSDEFWSDREFSRVFEG  159 (285)
Q Consensus        81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  159 (285)
                      +++.+|+||++|+++|++++||||||+|+||++||++||++|++|+. +||+.+|... +.+.          ......+
T Consensus        83 ~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~-~aav~d~~~~~~~~~----------~~~~~l~  151 (276)
T 3tzt_A           83 YPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYI-LAAASHTGKTDMANN----------VNRIRLG  151 (276)
T ss_dssp             -CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSS-EEEEEC--------------------------
T ss_pred             cCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCe-EEEEEecccchHHHH----------HHHhcCC
Confidence            77899999999999997799999999999999999999999999875 5554444321 1111          0011112


Q ss_pred             CCCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeecCc-cccccCCCCCc--cc--c
Q 023261          160 KRPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDH-RWNQHGLGGHN--VE--N  234 (285)
Q Consensus       160 ~~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L~~-~wN~~~~~~~~--~~--~  234 (285)
                      ...+||||||||+|+++||+.++.++++++++....  ...++|||+||.+|.++++.||+ +||++......  ..  +
T Consensus       152 ~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~--~~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~~~~~~  229 (276)
T 3tzt_A          152 TDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHM--NLLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYLIRSKK  229 (276)
T ss_dssp             ----CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHHHHTTT
T ss_pred             CCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccc--cccCCChhHHHHHHhCCEEECCchheeeecccchhhhccccc
Confidence            235899999999999999999999999999877543  23468999999999999999999 99998532100  00  0


Q ss_pred             cc-cccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccC
Q 023261          235 SC-RNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLY  277 (285)
Q Consensus       235 ~~-~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~  277 (285)
                      .. .....++++||||+|..|||+..+..   +++++||+|...
T Consensus       230 ~~~~~~~~~~~~iiHy~g~~KPW~~~~~~---~~~~~w~~Y~~~  270 (276)
T 3tzt_A          230 QADLAWLMDHTVVLHFCGRDKPWKKNHRN---KFTSLYKHYMSL  270 (276)
T ss_dssp             CCSHHHHHHHCCEEECCSSCCTTSTTCCS---TTHHHHHHHHHH
T ss_pred             hhhhhhhccCCeEEEECCCCCCcCCCCCC---chHHHHHHHHHH
Confidence            00 00012368999999999999987643   699999999754
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Back     alignment and structure
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Back     alignment and structure
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A* Back     alignment and structure
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ... Back     alignment and structure
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 285
d1ga8a_282 c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri 5e-32
d1ll2a_263 c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun 3e-09
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

 Score =  117 bits (294), Expect = 5e-32
 Identities = 60/291 (20%), Positives = 97/291 (33%), Gaps = 32/291 (10%)

Query: 1   MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQV 60
              D  Y      A  SV         + FH + A  S AN   +A  +R      + + 
Sbjct: 5   FAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRG--GGGNIRF 61

Query: 61  YLFREKFVTGLISSSIRRALDSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWR 120
                +   G   +       S   YAR+ L +       +V+YLD DV+V D +  LW 
Sbjct: 62  IDVNPEDFAGFPLNIRH---ISITTYARLKLGEY-IADCDKVLYLDIDVLVRDSLTPLWD 117

Query: 121 IPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGKRPCYFNTGVMVMDLVRWREG 180
             L       + +        Y      +D E           YFN GV++++L +WR  
Sbjct: 118 TDLGDNWLGASIDLFVERQEGYKQKIGMADGE----------YYFNAGVLLINLKKWRRH 167

Query: 181 DYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGHNVENSCRNLH 240
           D  +   +W+   K+   Y          +F G V   + R+N        + N   + H
Sbjct: 168 DIFKMSSEWVEQYKDVMQY--QDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFASRH 225

Query: 241 -----------AGPVSLMHWSGKGKPWVRLDAKKPCPV--DYLWAPYDLYN 278
                        PV++ H+ G  KPW R           +   +   +  
Sbjct: 226 TDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTVPE 276
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query285
d1ga8a_282 Galactosyltransferase LgtC {Neisseria meningitidis 100.0
d1ll2a_263 Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 99.98
d1o7qa_287 alpha-1,3-galactosyltransferase catalytic domain { 96.6
d1lzia_283 Glycosyltransferase A catalytic domain {Human (Hom 95.9
d1fo8a_343 N-acetylglucosaminyltransferase I {Rabbit (Oryctol 89.18
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=100.00  E-value=4.4e-48  Score=337.86  Aligned_cols=258  Identities=22%  Similarity=0.269  Sum_probs=196.2

Q ss_pred             CCCCcccchhhHHHHHHHHHhcCCCCceEEEEEeCCCCcccHHHHHHHHHhhCCCceEEEEecchhhhcccccchhhhhc
Q 023261            1 MTLDPEYLRGTIAAVHSVLKHTSCPENVFFHFIAAESSPANTNDLAQTVRSAFPYLSFQVYLFREKFVTGLISSSIRRAL   80 (285)
Q Consensus         1 ~~~d~~y~~~~~v~l~Sl~~~~~~~~~~~~~i~~~~~~~~~~~~L~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   80 (285)
                      ||+|++|+++++|+++||+++++. ..++|||++++++++..+.|++.+...  +.++.++.++...+......   ..+
T Consensus         5 ~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~~l~~~~~~~--~~~i~~~~~~~~~~~~~~~~---~~~   78 (282)
T d1ga8a_           5 FAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRAAVAANLRGG--GGNIRFIDVNPEDFAGFPLN---IRH   78 (282)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHHHHHHTSGGG--TTTEEEEECCGGGGTTSCCC---CTT
T ss_pred             EECCHHHHHHHHHHHHHHHHHCcC-CCEEEEEEcCCCCHHHHHHHHHHHHHc--CCeEEEEECCchHhcccccc---ccc
Confidence            589999999999999999999874 679999999999999998888776543  35677777876655543221   346


Q ss_pred             cCchhhhHHhhHhhhccccCeEEEEecceeeecCHHHHhccCCCCCceeeeecccccccccccccccccchhhhhccCCC
Q 023261           81 DSPLNYARIYLADILEPSIKRVIYLDSDVIVVDDIQKLWRIPLSGGRTIGAPEYCHANFTKYFSDEFWSDREFSRVFEGK  160 (285)
Q Consensus        81 ~s~~~y~Rl~i~~llp~~~~rvlYLD~D~iv~~dl~~L~~~dl~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (285)
                      ++.++|+||++|++||+ ++||||||+||||++||++||+++++++.++|+++........          ...+.....
T Consensus        79 ~s~~~y~Rl~l~~~lp~-~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~~~~~~----------~~~~~~~~~  147 (282)
T d1ga8a_          79 ISITTYARLKLGEYIAD-CDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEG----------YKQKIGMAD  147 (282)
T ss_dssp             CCGGGGGGGGHHHHCCS-CSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTT----------HHHHTTCCT
T ss_pred             cCHHHHHHHHHhhhCCc-cceEEEecCCEEEecchHHHHhcccccceeeeehhhhhhhhhh----------hHHHhCCCC
Confidence            68899999999999996 9999999999999999999999999987655555532211111          011112235


Q ss_pred             CCceeeeeeeeeehhhhhhhchHHHHHHHHHHhhccccccCCCccchhhhhcCCeeecCccccccCCCCC---cc-----
Q 023261          161 RPCYFNTGVMVMDLVRWREGDYTRKIEKWMRIQKERRIYELGSLPPFLLVFGGDVEAIDHRWNQHGLGGH---NV-----  232 (285)
Q Consensus       161 ~~~yfNsGVml~nl~~~r~~~~~~~~~~~~~~~~~~~~~~~~dq~~lN~~~~~~~~~L~~~wN~~~~~~~---~~-----  232 (285)
                      +..||||||||+|+++||++++.++++++++.....  +.++||++||.+|.|++..||++||++...+.   ..     
T Consensus       148 ~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~~~--~~~~DQd~LN~~f~~~~~~L~~~~N~~~~~~~~~~~~~~~~~  225 (282)
T d1ga8a_         148 GEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDV--MQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFASRH  225 (282)
T ss_dssp             TSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTT--CSSTHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----CSC
T ss_pred             CCceeecceeeechhhhhhhhHHHHHHHHHHhcccC--cccCchhHHHHHhcCCEEeCCHHHeecccccccccccccccc
Confidence            689999999999999999999999999998875432  34579999999999999999999999742110   00     


Q ss_pred             c-ccc--cccCCCCceEEEecCCCCCCCCCCCCCCCCcccCccccccCCCC
Q 023261          233 E-NSC--RNLHAGPVSLMHWSGKGKPWVRLDAKKPCPVDYLWAPYDLYNSH  280 (285)
Q Consensus       233 ~-~~~--~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~W~~y~~~~~~  280 (285)
                      . ...  ......+++||||+|+.|||+..+..   +++..|++|+...+.
T Consensus       226 ~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~---~~~~~~~~~~~~~~~  273 (282)
T d1ga8a_         226 TDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTA---WGAERFTELAGSLTT  273 (282)
T ss_dssp             CCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCS---TTTHHHHHHHTTCSC
T ss_pred             chhhhhhhhhccCCCEEEeeCCCCCCCCCCCCC---hhHHHHHHHHHhhhc
Confidence            0 000  01123568999999999999877643   577888888776543
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure